Column1	term	GOSlim_bin	aspect	ProteinName
ruditapes_c2725	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_lrc35471	phosphorylation	other metabolic processes	P	Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase (LjCCaMK) (EC 2.7.11.17)
ruditapes_lrc35471	protein amino acid phosphorylation	protein metabolism	P	Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase (LjCCaMK) (EC 2.7.11.17)
ruditapes_lrc35471	response to symbiont	other biological processes	P	Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase (LjCCaMK) (EC 2.7.11.17)
ruditapes_lrc35471	nodulation	other biological processes	P	Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase (LjCCaMK) (EC 2.7.11.17)
ruditapes_lrc35471	protein amino acid autophosphorylation	protein metabolism	P	Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase (LjCCaMK) (EC 2.7.11.17)
ruditapes_c20176	carbohydrate metabolic process	other metabolic processes	P	Xylose isomerase (EC 5.3.1.5)
ruditapes_c20176	D-xylose metabolic process	other metabolic processes	P	Xylose isomerase (EC 5.3.1.5)
ruditapes_c20176	pentose-phosphate shunt	other metabolic processes	P	Xylose isomerase (EC 5.3.1.5)
ruditapes_c19993	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Putative competence-damage inducible protein
ruditapes_c21229	oxidation reduction	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes_c21229	heme biosynthetic process	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes_c21229	heme a biosynthetic process	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes2_c182	biological_process	other biological processes	P	Transmembrane protein 129
ruditapes_s39059	biological_process	other biological processes	P	Transmembrane protein 129
ruditapes_c30346	transport	transport	P	V-type ATP synthase subunit E (V-ATPase subunit E)
ruditapes_c30346	ATP hydrolysis coupled proton transport	transport	P	V-type ATP synthase subunit E (V-ATPase subunit E)
ruditapes_c30346	proton transport	transport	P	V-type ATP synthase subunit E (V-ATPase subunit E)
ruditapes_c30346	ATP biosynthetic process	other metabolic processes	P	V-type ATP synthase subunit E (V-ATPase subunit E)
ruditapes_c30346	ion transport	transport	P	V-type ATP synthase subunit E (V-ATPase subunit E)
ruditapes_c11999	phagocytosis	transport	P	Multiple epidermal growth factor-like domains protein 10 (Multiple EGF-like domains protein 10)
ruditapes_c11999	phagocytosis	cell organization and biogenesis	P	Multiple epidermal growth factor-like domains protein 10 (Multiple EGF-like domains protein 10)
ruditapes_c11999	cell adhesion	cell adhesion	P	Multiple epidermal growth factor-like domains protein 10 (Multiple EGF-like domains protein 10)
ruditapes_c27047	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Activating transcription factor 7-interacting protein 1 (MBD1-containing chromatin-associated factor 1)
ruditapes_c27047	"transcription, DNA-dependent"	RNA metabolism	P	Activating transcription factor 7-interacting protein 1 (MBD1-containing chromatin-associated factor 1)
ruditapes_c16182	"transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase II-associated protein 1
ruditapes_c31275	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 227
ruditapes_c31275	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 227
ruditapes_lrc9767	biological_process	other biological processes	P	EF-hand calcium-binding domain-containing protein 5
ruditapes_c10818	steroid metabolic process	other metabolic processes	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c10818	lipid metabolic process	other metabolic processes	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c10818	cholesterol metabolic process	other metabolic processes	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c28271	ATP catabolic process	other metabolic processes	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_c28271	proteasomal protein catabolic process	protein metabolism	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_c28271	modification-dependent protein catabolic process	protein metabolism	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_c15099	potassium ion transport	transport	P	Potassium-transporting ATPase C chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] C chain) (Potassium-binding and translocating subunit C) (Potassium-translocating ATPase C chain)
ruditapes_c15099	transport	transport	P	Potassium-transporting ATPase C chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] C chain) (Potassium-binding and translocating subunit C) (Potassium-translocating ATPase C chain)
ruditapes_c15099	ion transport	transport	P	Potassium-transporting ATPase C chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] C chain) (Potassium-binding and translocating subunit C) (Potassium-translocating ATPase C chain)
ruditapes_c22152	cellular process	other biological processes	P	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Proline dipeptidase) (Prolidase)
ruditapes_c22152	proteolysis	protein metabolism	P	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Proline dipeptidase) (Prolidase)
ruditapes_lrc14188	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc14188	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc14188	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc14188	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc14188	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes2_c4788	phosphonate catabolic process	other metabolic processes	P	Phosphonoacetaldehyde hydrolase (Phosphonatase) (EC 3.11.1.1) (Phosphonoacetaldehyde phosphonohydrolase)
ruditapes_c25164	regulation of cell shape	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c25164	peptidoglycan biosynthetic process	other metabolic processes	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c25164	cell wall organization	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c24945	cellular metabolic process	other metabolic processes	P	Ribonuclease D (RNase D) (EC 3.1.13.5)
ruditapes_c24945	tRNA processing	RNA metabolism	P	Ribonuclease D (RNase D) (EC 3.1.13.5)
ruditapes_c24945	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Ribonuclease D (RNase D) (EC 3.1.13.5)
ruditapes_c17536	porphyrin biosynthetic process	other metabolic processes	P	Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37)
ruditapes_c19442	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c19442	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c19442	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c19442	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c19442	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes2_lrc3798	intracellular protein transport	transport	P	Protein translocase subunit SecF
ruditapes2_lrc3798	protein transport	transport	P	Protein translocase subunit SecF
ruditapes2_lrc3798	transport	transport	P	Protein translocase subunit SecF
ruditapes_c24139	protein catabolic process	protein metabolism	P	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase)
ruditapes_c20161	proteolysis	protein metabolism	P	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp)
ruditapes_c1635	translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c1635	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c1635	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c1635	tRNA aminoacylation for protein translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c1635	tRNA aminoacylation for protein translation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c1635	tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes2_c2268	organic acid metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes2_c2268	metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes2_c2268	phosphorylation	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c7364	translation	protein metabolism	P	30S ribosomal protein S5
ruditapes2_c3913	phosphonate catabolic process	other metabolic processes	P	Phosphonoacetaldehyde hydrolase (Phosphonatase) (EC 3.11.1.1) (Phosphonoacetaldehyde phosphonohydrolase)
ruditapes_c4930	phosphonate catabolic process	other metabolic processes	P	Phosphonoacetaldehyde hydrolase (Phosphonatase) (EC 3.11.1.1) (Phosphonoacetaldehyde phosphonohydrolase)
ruditapes_c13792	rRNA processing	RNA metabolism	P	Ribosome maturation factor RimM
ruditapes_c13792	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimM
ruditapes_c7824	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c7824	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c7824	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c7824	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c7824	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c7824	cell division	other biological processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c17487	regulation of ARF GTPase activity	signal transduction	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c17487	DNA repair	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c17487	response to DNA damage stimulus	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c17487	DNA repair	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c17487	DNA recombination	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c23375	histidine biosynthetic process	other metabolic processes	P	Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)
ruditapes_c23375	cellular amino acid biosynthetic process	other metabolic processes	P	Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)
ruditapes_c6641	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes_c33744	protein transport	transport	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c33744	cell division	other biological processes	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c33744	protein peptidyl-prolyl isomerization	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c33744	protein folding	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c33744	cell cycle	cell cycle and proliferation	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c28452	peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid	protein metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c28452	RNA modification	RNA metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c28452	biopolymer modification	other metabolic processes	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c16414	translation	protein metabolism	P	Elongation factor Ts (EF-Ts)
ruditapes_c16414	translational elongation	protein metabolism	P	Elongation factor Ts (EF-Ts)
ruditapes_c12557	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_lrc14825	heme O biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_lrc14825	heme biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_c16690	transport	transport	P	Protein translocase subunit SecA
ruditapes_c16690	protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c16690	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes_c16690	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c16690	protein import	transport	P	Protein translocase subunit SecA
ruditapes2_c339	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes2_c339	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes2_c339	biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c12263	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12263	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12263	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12263	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12263	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes2_lrc1556	translation	protein metabolism	P	50S ribosomal protein L22
ruditapes_c29064	tRNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c29064	biopolymer modification	other metabolic processes	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c29064	tRNA processing	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c29064	RNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c5420	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_c14065	viral genome replication	other biological processes	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c20687	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c14065	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c20687	viral genome replication	other biological processes	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c21717	biological_process	other biological processes	P	Ubiquitin-conjugating enzyme E2Q-like protein 1 (EC 6.3.2.19)
ruditapes_c21717	protein ubiquitination	protein metabolism	P	Ubiquitin-conjugating enzyme E2Q-like protein 1 (EC 6.3.2.19)
ruditapes2_c2986	tRNA aminoacylation for protein translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes2_c2986	tRNA aminoacylation for protein translation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes2_c2986	prolyl-tRNA aminoacylation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes2_c2986	prolyl-tRNA aminoacylation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes2_c2986	translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c5454	cellular amino acid biosynthetic process	other metabolic processes	P	Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)
ruditapes_c11008	histidine biosynthetic process	other metabolic processes	P	Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)
ruditapes_c11008	cellular amino acid biosynthetic process	other metabolic processes	P	Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)
ruditapes_c5454	histidine biosynthetic process	other metabolic processes	P	Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)
ruditapes_c7629	translational elongation	protein metabolism	P	Elongation factor G (EF-G)
ruditapes_c7629	translation	protein metabolism	P	Elongation factor G (EF-G)
ruditapes_c7629	GTP catabolic process	other metabolic processes	P	Elongation factor G (EF-G)
ruditapes_c14149	transport	transport	P	Energy-coupling factor transporter ATP-binding protein EcfA2 (ECF transporter A component EcfA2) (EC 3.6.3.-)
ruditapes_c14149	ATP catabolic process	other metabolic processes	P	Energy-coupling factor transporter ATP-binding protein EcfA2 (ECF transporter A component EcfA2) (EC 3.6.3.-)
ruditapes_s35659	alanine metabolic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_s35659	regulation of cell shape	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_s35659	peptidoglycan biosynthetic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_s35659	cell wall organization	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c13571	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c13571	metabolic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c23931	'de novo' IMP biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)
ruditapes_c23931	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)
ruditapes_c17574	NAD biosynthetic process	other metabolic processes	P	Quinolinate synthase A (EC 2.5.1.72)
ruditapes_c17574	quinolinate biosynthetic process	other metabolic processes	P	Quinolinate synthase A (EC 2.5.1.72)
ruditapes_c17574	pyridine nucleotide biosynthetic process	other metabolic processes	P	Quinolinate synthase A (EC 2.5.1.72)
ruditapes_s39278	translation	protein metabolism	P	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC 6.3.5.-)
ruditapes_lrc20646	metabolic process	other metabolic processes	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_lrc20646	peptidoglycan biosynthetic process	other metabolic processes	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_lrc20646	regulation of cell shape	cell organization and biogenesis	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_lrc20646	cell wall organization	cell organization and biogenesis	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c31736	transport	transport	P	Protein TolB
ruditapes_c31736	protein import	transport	P	Protein TolB
ruditapes_c31736	protein transport	transport	P	Protein TolB
ruditapes_c16436	biotin biosynthetic process	other metabolic processes	P	ATP-dependent dethiobiotin synthetase BioD (EC 6.3.3.3) (DTB synthetase) (DTBS) (Dethiobiotin synthase)
ruditapes_c22846	ion transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c22846	proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c22846	ATP biosynthetic process	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c22846	ATP synthesis coupled proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c22846	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c22846	transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c11180	translation	protein metabolism	P	50S ribosomal protein L32
ruditapes_c23704	methylation	other metabolic processes	P	Histidine-specific methyltransferase EgtD (EC 2.1.1.44) (Histidine-alpha-N-methyltransferase)
ruditapes_c23704	protein amino acid methylation	protein metabolism	P	Histidine-specific methyltransferase EgtD (EC 2.1.1.44) (Histidine-alpha-N-methyltransferase)
ruditapes_c2174	glycogen biosynthetic process	other metabolic processes	P	Maltokinase (MaK) (EC 2.7.1.175) (Maltose-1-phosphate synthase)
ruditapes_c2174	phosphorylation	other metabolic processes	P	Maltokinase (MaK) (EC 2.7.1.175) (Maltose-1-phosphate synthase)
ruditapes_c2174	trehalose biosynthetic process	other metabolic processes	P	Maltokinase (MaK) (EC 2.7.1.175) (Maltose-1-phosphate synthase)
ruditapes_c2174	glycogen metabolic process	other metabolic processes	P	Maltokinase (MaK) (EC 2.7.1.175) (Maltose-1-phosphate synthase)
ruditapes_c2174	carbohydrate phosphorylation	other metabolic processes	P	Maltokinase (MaK) (EC 2.7.1.175) (Maltose-1-phosphate synthase)
ruditapes_c2174	carbohydrate metabolic process	other metabolic processes	P	Maltokinase (MaK) (EC 2.7.1.175) (Maltose-1-phosphate synthase)
ruditapes_c8551	DNA repair	stress response	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c8551	DNA repair	DNA metabolism	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c8551	response to DNA damage stimulus	stress response	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c8551	base-excision repair	stress response	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c8551	base-excision repair	DNA metabolism	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c12212	tRNA processing	RNA metabolism	P	tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase)
ruditapes_c18742	translation	protein metabolism	P	50S ribosomal protein L31
ruditapes_c31637	peptidoglycan biosynthetic process	other metabolic processes	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c31637	regulation of cell shape	cell organization and biogenesis	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c31637	metabolic process	other metabolic processes	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c31637	cell wall organization	cell organization and biogenesis	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_lrc24336	transport	transport	P	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)
ruditapes_lrc24336	ATP catabolic process	other metabolic processes	P	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)
ruditapes_lrc24336	response to antibiotic	other biological processes	P	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)
ruditapes_c8013	metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c8013	phosphorylation	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c8013	organic acid metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c16812	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c16812	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c16812	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c16812	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes2_c2773	cellular amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes2_c2773	leucine biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes2_c2773	carboxylic acid metabolic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes2_c2773	branched chain family amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c7339	photosynthesis	other metabolic processes	P	Photosystem I assembly protein ycf3
ruditapes_c3233	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_c10800	photosynthesis	other metabolic processes	P	Protein PsbN
ruditapes2_c1394	cellular protein metabolic process	protein metabolism	P	"60 kDa chaperonin, chloroplastic (GroEL protein) (Protein Cpn60)"
ruditapes2_c1394	protein refolding	protein metabolism	P	"60 kDa chaperonin, chloroplastic (GroEL protein) (Protein Cpn60)"
ruditapes2_c1394	protein folding	protein metabolism	P	"60 kDa chaperonin, chloroplastic (GroEL protein) (Protein Cpn60)"
ruditapes_c23060	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23060	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23060	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23060	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23060	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23060	metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23060	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23060	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c26003	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c26003	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes2_c2173	cell wall organization	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c2173	regulation of cell shape	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c2173	cell cycle	cell cycle and proliferation	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c2173	peptidoglycan biosynthetic process	other metabolic processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c2173	cell division	other biological processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c831	mRNA processing	RNA metabolism	P	Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor 35 kDa subunit) (U2 snRNP auxiliary factor small subunit)
ruditapes_c831	RNA splicing	RNA metabolism	P	Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor 35 kDa subunit) (U2 snRNP auxiliary factor small subunit)
ruditapes_s38352	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein C-ets-2
ruditapes2_c622	cell cycle	cell cycle and proliferation	P	Growth arrest and DNA damage-inducible proteins-interacting protein 1
ruditapes_c9516	multicellular organismal development	developmental processes	P	Protein FAM132A
ruditapes_c9516	Wnt receptor signaling pathway	signal transduction	P	Protein FAM132A
ruditapes_c28389	biological_process	other biological processes	P	EF-hand calcium-binding domain-containing protein 4A
ruditapes_c27419	translation	protein metabolism	P	50S ribosomal protein L32
ruditapes_c17808	cellular amino acid biosynthetic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c17808	L-serine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c17808	glycine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c17808	one-carbon compound metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes2_c2348	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes2_c2348	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c27744	biosynthetic process	other metabolic processes	P	Pantothenate synthetase (PS) (EC 6.3.2.1) (Pantoate--beta-alanine ligase) (Pantoate-activating enzyme)
ruditapes_c27744	pantothenate biosynthetic process	other metabolic processes	P	Pantothenate synthetase (PS) (EC 6.3.2.1) (Pantoate--beta-alanine ligase) (Pantoate-activating enzyme)
ruditapes_c26984	gluconeogenesis	other metabolic processes	P	Phosphoenolpyruvate carboxykinase [ATP] (PEP carboxykinase) (PEPCK) (EC 4.1.1.49) (Phosphoenolpyruvate carboxylase)
ruditapes_c18898	translation	protein metabolism	P	30S ribosomal protein S17
ruditapes_c24551	protein maturation	protein metabolism	P	Fe/S biogenesis protein NfuA
ruditapes_c24551	iron-sulfur cluster assembly	other metabolic processes	P	Fe/S biogenesis protein NfuA
ruditapes_c22269	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c22269	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c29894	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c29894	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c29894	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c30860	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c30860	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c30860	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc4951	translation	protein metabolism	P	30S ribosomal protein S2
ruditapes_c24916	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c24916	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c24916	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c24916	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c24916	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c24916	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c10037	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c10037	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c10037	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c29095	translation	protein metabolism	P	30S ribosomal protein S15
ruditapes_lrc38997	alanine biosynthetic process	other metabolic processes	P	Aspartate 1-decarboxylase (EC 4.1.1.11) (Aspartate alpha-decarboxylase) [Cleaved into: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain]
ruditapes_lrc38997	pantothenate biosynthetic process	other metabolic processes	P	Aspartate 1-decarboxylase (EC 4.1.1.11) (Aspartate alpha-decarboxylase) [Cleaved into: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain]
ruditapes_c13993	peptidoglycan biosynthetic process	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c13993	dephosphorylation	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c13993	regulation of cell shape	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c13993	cell wall organization	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c13993	response to antibiotic	other biological processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes2_c1185	protein catabolic process	protein metabolism	P	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase)
ruditapes_c10658	response to stress	stress response	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c10658	protein folding	protein metabolism	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c19173	glycine catabolic process	other metabolic processes	P	Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein)
ruditapes_lrc14028	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc14028	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc14028	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc14028	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc14028	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc14028	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_c30600	riboflavin biosynthetic process	other metabolic processes	P	Riboflavin kinase (EC 2.7.1.26) (Flavin mononucleotide kinase 1)
ruditapes_c30600	phosphorylation	other metabolic processes	P	Riboflavin kinase (EC 2.7.1.26) (Flavin mononucleotide kinase 1)
ruditapes_c24295	vesicle-mediated transport	transport	P	Protein transport protein sec31
ruditapes_c24295	protein transport	transport	P	Protein transport protein sec31
ruditapes_c24295	transport	transport	P	Protein transport protein sec31
ruditapes_c13108	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Xylanolytic transcriptional activator xlnR (Xylanase regulator)
ruditapes_c13108	xylan catabolic process	other metabolic processes	P	Xylanolytic transcriptional activator xlnR (Xylanase regulator)
ruditapes_c13108	"transcription, DNA-dependent"	RNA metabolism	P	Xylanolytic transcriptional activator xlnR (Xylanase regulator)
ruditapes_c13108	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Xylanolytic transcriptional activator xlnR (Xylanase regulator)
ruditapes_c24859	metabolic process	other metabolic processes	P	"Mannan endo-1,4-beta-mannosidase F (EC 3.2.1.78) (Endo-beta-1,4-mannanase F)"
ruditapes_c24859	carbohydrate metabolic process	other metabolic processes	P	"Mannan endo-1,4-beta-mannosidase F (EC 3.2.1.78) (Endo-beta-1,4-mannanase F)"
ruditapes_c15601	phosphatidylcholine metabolic process	other metabolic processes	P	Lysophospholipase nte1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c15601	lipid catabolic process	other metabolic processes	P	Lysophospholipase nte1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c15601	metabolic process	other metabolic processes	P	Lysophospholipase nte1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c15601	lipid metabolic process	other metabolic processes	P	Lysophospholipase nte1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c25272	regulation of defense response to virus	stress response	P	Dicer-like protein 2 [Includes: Endoribonuclease dcl2 (EC 3.1.26.-); ATP-dependent helicase dcl2 (EC 3.6.4.-)]
ruditapes_c25272	RNA processing	RNA metabolism	P	Dicer-like protein 2 [Includes: Endoribonuclease dcl2 (EC 3.1.26.-); ATP-dependent helicase dcl2 (EC 3.6.4.-)]
ruditapes_c25272	response to virus	other biological processes	P	Dicer-like protein 2 [Includes: Endoribonuclease dcl2 (EC 3.1.26.-); ATP-dependent helicase dcl2 (EC 3.6.4.-)]
ruditapes_c21329	RNA processing	RNA metabolism	P	Dicer-like protein 1 [Includes: Endoribonuclease dcl1 (EC 3.1.26.-); ATP-dependent helicase dcl1 (EC 3.6.4.-)]
ruditapes_c21329	response to virus	other biological processes	P	Dicer-like protein 1 [Includes: Endoribonuclease dcl1 (EC 3.1.26.-); ATP-dependent helicase dcl1 (EC 3.6.4.-)]
ruditapes_c21329	regulation of defense response to virus	stress response	P	Dicer-like protein 1 [Includes: Endoribonuclease dcl1 (EC 3.1.26.-); ATP-dependent helicase dcl1 (EC 3.6.4.-)]
ruditapes_lrc12034	phosphorylation	other metabolic processes	P	Polynucleotide 5'-hydroxyl-kinase grc3 (EC 2.7.1.-)
ruditapes_lrc12034	rRNA processing	RNA metabolism	P	Polynucleotide 5'-hydroxyl-kinase grc3 (EC 2.7.1.-)
ruditapes_c24742	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 5 (Mediator complex subunit 5)
ruditapes_c24742	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 5 (Mediator complex subunit 5)
ruditapes_c24742	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 5 (Mediator complex subunit 5)
ruditapes_c24878	transport	transport	P	Chitin synthase export chaperone
ruditapes_c24878	cell wall organization	cell organization and biogenesis	P	Chitin synthase export chaperone
ruditapes_c24878	protein transport	transport	P	Chitin synthase export chaperone
ruditapes_s33728	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 25 (U3 snoRNA-associated protein 25) (U three protein 25)
ruditapes_s33728	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 25 (U3 snoRNA-associated protein 25) (U three protein 25)
ruditapes_c20027	proteolysis	protein metabolism	P	Mitochondrial intermediate peptidase (MIP) (EC 3.4.24.59) (Octapeptidyl aminopeptidase)
ruditapes_c1814	cellular amino acid biosynthetic process	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT)
ruditapes_c1814	sulfate assimilation	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT)
ruditapes_c1814	phosphorylation	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT)
ruditapes_c1814	cysteine biosynthetic process	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT)
ruditapes_c1814	methionine biosynthetic process	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT)
ruditapes_c1814	metabolic process	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT)
ruditapes_c3226	carbohydrate metabolic process	other metabolic processes	P	"Probable mannan endo-1,4-beta-mannosidase A (EC 3.2.1.78) (Endo-beta-1,4-mannanase A)"
ruditapes_c3226	metabolic process	other metabolic processes	P	"Probable mannan endo-1,4-beta-mannosidase A (EC 3.2.1.78) (Endo-beta-1,4-mannanase A)"
ruditapes_c22502	transmembrane transport	transport	P	GDP-mannose transporter 2 (GMT 2)
ruditapes_c22502	carbohydrate transport	transport	P	GDP-mannose transporter 2 (GMT 2)
ruditapes_c22502	nucleotide-sugar transport	transport	P	GDP-mannose transporter 2 (GMT 2)
ruditapes_c22502	transport	transport	P	GDP-mannose transporter 2 (GMT 2)
ruditapes_c2893	proteolysis	protein metabolism	P	Methionine aminopeptidase 2 homolog NFIA
ruditapes_c2893	cellular process	other biological processes	P	Methionine aminopeptidase 2 homolog NFIA
ruditapes_c7835	cellular amino acid biosynthetic process	other metabolic processes	P	"Arginine biosynthesis bifunctional protein ArgJ, mitochondrial [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (GAT) (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS)]"
ruditapes_c7835	arginine biosynthetic process	other metabolic processes	P	"Arginine biosynthesis bifunctional protein ArgJ, mitochondrial [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (GAT) (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS)]"
ruditapes_c7835	metabolic process	other metabolic processes	P	"Arginine biosynthesis bifunctional protein ArgJ, mitochondrial [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (GAT) (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS)]"
ruditapes_c10255	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription activator of gluconeogenesis acuK
ruditapes_c10255	"transcription, DNA-dependent"	RNA metabolism	P	Transcription activator of gluconeogenesis acuK
ruditapes_c10255	gluconeogenesis	other metabolic processes	P	Transcription activator of gluconeogenesis acuK
ruditapes_c3958	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14)
ruditapes_c3958	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14)
ruditapes_c3958	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14)
ruditapes_c13876	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit L (eIF3l)
ruditapes_c13876	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit L (eIF3l)
ruditapes_c10405	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_c27715	fatty acid biosynthetic process	other metabolic processes	P	HTH-type transcriptional repressor FabR
ruditapes_c27715	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional repressor FabR
ruditapes_c27715	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional repressor FabR
ruditapes_c27715	lipid biosynthetic process	other metabolic processes	P	HTH-type transcriptional repressor FabR
ruditapes_c8575	oxidation reduction	other metabolic processes	P	Anaerobic glycerol-3-phosphate dehydrogenase subunit B (Anaerobic G-3-P dehydrogenase subunit B) (Anaerobic G3Pdhase B) (EC 1.1.5.3)
ruditapes_c8378	proteolysis	protein metabolism	P	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Proline dipeptidase) (Prolidase)
ruditapes_c8378	cellular process	other biological processes	P	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Proline dipeptidase) (Prolidase)
ruditapes_c24795	metabolic process	other metabolic processes	P	Acetyl-coenzyme A synthetase (AcCoA synthetase) (Acs) (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-activating enzyme)
ruditapes2_c527	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutL
ruditapes2_c527	mismatch repair	stress response	P	DNA mismatch repair protein MutL
ruditapes2_c527	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes2_c527	DNA repair	stress response	P	DNA mismatch repair protein MutL
ruditapes2_c527	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_s37906	protein import	transport	P	Protein translocase subunit SecA
ruditapes_s37906	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes_s37906	protein transport	transport	P	Protein translocase subunit SecA
ruditapes_s37906	transport	transport	P	Protein translocase subunit SecA
ruditapes_s37906	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes_c3730	ribosome biogenesis	other biological processes	P	GTPase Era
ruditapes_c21083	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase)
ruditapes_c21845	metabolic process	other metabolic processes	P	UPF0207 protein YE1340
ruditapes2_c4234	methionine biosynthetic process	other metabolic processes	P	Methylthioribose kinase (MTR kinase) (EC 2.7.1.100)
ruditapes2_c4234	phosphorylation	other metabolic processes	P	Methylthioribose kinase (MTR kinase) (EC 2.7.1.100)
ruditapes2_c4234	cellular amino acid biosynthetic process	other metabolic processes	P	Methylthioribose kinase (MTR kinase) (EC 2.7.1.100)
ruditapes_c31685	metabolic process	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes_c31685	nitrogen compound metabolic process	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes_c24559	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c24559	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c24559	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c24559	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c24559	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c24559	cell division	other biological processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c648	response to stress	stress response	P	DNA protection during starvation protein (EC 1.16.-.-)
ruditapes2_c648	oxidation reduction	other metabolic processes	P	DNA protection during starvation protein (EC 1.16.-.-)
ruditapes2_c648	chromosome condensation	cell organization and biogenesis	P	DNA protection during starvation protein (EC 1.16.-.-)
ruditapes2_c648	cellular iron ion homeostasis	other biological processes	P	DNA protection during starvation protein (EC 1.16.-.-)
ruditapes_c1662	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c1662	metabolic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c1662	terpenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c1662	thiamin biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c17190	heme biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_c17190	heme O biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes2_c597	oxidation reduction	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c1348	arginine biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes2_c592	arginine biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c1348	cellular amino acid biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes2_c592	oxidation reduction	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c1348	cellular amino acid metabolic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes2_c592	cellular amino acid metabolic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c1348	oxidation reduction	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes2_c597	arginine biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes2_c597	cellular amino acid biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes2_c597	cellular amino acid metabolic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes2_c592	cellular amino acid biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c15182	response to stress	stress response	P	Protein hfq
ruditapes_c15182	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein hfq
ruditapes_c26898	lipoate biosynthetic process	other metabolic processes	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes_c26898	protein modification process	protein metabolism	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes_c26126	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes_c18250	cysteine metabolic process	other metabolic processes	P	Cysteine desulfurase (EC 2.8.1.7)
ruditapes_c18250	metabolic process	other metabolic processes	P	Cysteine desulfurase (EC 2.8.1.7)
ruditapes_s39320	ion transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_s39320	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_s39320	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_s39320	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_s39320	proton transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_s39320	ATP metabolic process	other metabolic processes	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_s39320	ATP hydrolysis coupled proton transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_s39320	transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c11642	hydrogen peroxide catabolic process	stress response	P	Peroxidasin-like protein (EC 1.11.1.7) (Cardiac peroxidase) (Vascular peroxidase 2) (polysomal ribonuclease 1) (PRM1)
ruditapes_c11642	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidasin-like protein (EC 1.11.1.7) (Cardiac peroxidase) (Vascular peroxidase 2) (polysomal ribonuclease 1) (PRM1)
ruditapes_c11642	oxidation reduction	other metabolic processes	P	Peroxidasin-like protein (EC 1.11.1.7) (Cardiac peroxidase) (Vascular peroxidase 2) (polysomal ribonuclease 1) (PRM1)
ruditapes_c11642	response to oxidative stress	stress response	P	Peroxidasin-like protein (EC 1.11.1.7) (Cardiac peroxidase) (Vascular peroxidase 2) (polysomal ribonuclease 1) (PRM1)
ruditapes2_c3179	protein amino acid dephosphorylation	protein metabolism	P	Protein tyrosine phosphatase domain-containing protein 1 (EC 3.1.3.-)
ruditapes2_c3179	dephosphorylation	other metabolic processes	P	Protein tyrosine phosphatase domain-containing protein 1 (EC 3.1.3.-)
ruditapes_c22555	allantoin biosynthetic process	other metabolic processes	P	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (OHCU decarboxylase) (EC 4.1.1.n1) (Parahox neighbor)
ruditapes_c22555	purine base metabolic process	other metabolic processes	P	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (OHCU decarboxylase) (EC 4.1.1.n1) (Parahox neighbor)
ruditapes2_c3581	biological_process	other biological processes	P	Transmembrane protein 205
ruditapes2_c3094	biological_process	other biological processes	P	Transmembrane protein 205
ruditapes_c9729	cellular amino acid biosynthetic process	other metabolic processes	P	Pyrroline-5-carboxylate reductase 3 (P5C reductase 3) (P5CR 3) (EC 1.5.1.2) (Pyrroline-5-carboxylate reductase-like protein)
ruditapes_c9729	oxidation reduction	other metabolic processes	P	Pyrroline-5-carboxylate reductase 3 (P5C reductase 3) (P5CR 3) (EC 1.5.1.2) (Pyrroline-5-carboxylate reductase-like protein)
ruditapes_c9729	proline biosynthetic process	other metabolic processes	P	Pyrroline-5-carboxylate reductase 3 (P5C reductase 3) (P5CR 3) (EC 1.5.1.2) (Pyrroline-5-carboxylate reductase-like protein)
ruditapes2_lrc1675	transport	transport	P	Y+L amino acid transporter 2 (Solute carrier family 7 member 6) (y(+)L-type amino acid transporter 2) (Y+LAT2) (y+LAT-2)
ruditapes2_lrc1675	amino acid transport	transport	P	Y+L amino acid transporter 2 (Solute carrier family 7 member 6) (y(+)L-type amino acid transporter 2) (Y+LAT2) (y+LAT-2)
ruditapes_c4949	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (BPG-dependent PGAM) (PGAM) (Phosphoglyceromutase) (dPGM) (EC 5.4.2.1)"
ruditapes_c4949	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (BPG-dependent PGAM) (PGAM) (Phosphoglyceromutase) (dPGM) (EC 5.4.2.1)"
ruditapes_c8113	nitrogen compound metabolic process	other metabolic processes	P	Urease subunit alpha (EC 3.5.1.5) (Urea amidohydrolase subunit alpha)
ruditapes_c8113	urea metabolic process	other metabolic processes	P	Urease subunit alpha (EC 3.5.1.5) (Urea amidohydrolase subunit alpha)
ruditapes_c25608	lipoate biosynthetic process	other metabolic processes	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes_c25608	protein modification process	protein metabolism	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes_c17696	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c17696	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c17696	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_s35621	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes_s35621	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes_s35621	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes2_lrc4637	tRNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes2_lrc4637	tRNA processing	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes2_lrc4637	biopolymer modification	other metabolic processes	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes2_lrc4637	RNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_lrc33618	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_lrc33618	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_lrc33618	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_lrc33618	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c5831	translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c5831	tRNA aminoacylation for protein translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c5831	tRNA aminoacylation for protein translation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c5831	prolyl-tRNA aminoacylation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c5831	prolyl-tRNA aminoacylation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c29943	RNA processing	RNA metabolism	P	RNA 3'-terminal phosphate cyclase (RNA cyclase) (RNA-3'-phosphate cyclase) (EC 6.5.1.4)
ruditapes_c22715	cellular amino acid metabolic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c22715	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c22715	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes2_c1930	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes2_c1930	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes2_c1930	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes2_c1930	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes2_c1930	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c26295	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c26295	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c26295	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c26295	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c26295	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes2_c4392	translation	protein metabolism	P	Probable translation initiation factor IF-2
ruditapes2_c4392	GTP catabolic process	other metabolic processes	P	Probable translation initiation factor IF-2
ruditapes2_c4392	translational initiation	protein metabolism	P	Probable translation initiation factor IF-2
ruditapes_s38771	phospholipid biosynthetic process	other metabolic processes	P	Geranylgeranylglyceryl phosphate synthase (GGGP synthase) (GGGPS) (EC 2.5.1.41) ((S)-3-O-geranylgeranylglyceryl phosphate synthase) (Phosphoglycerol geranylgeranyltransferase)
ruditapes_s38771	glycerophospholipid metabolic process	other metabolic processes	P	Geranylgeranylglyceryl phosphate synthase (GGGP synthase) (GGGPS) (EC 2.5.1.41) ((S)-3-O-geranylgeranylglyceryl phosphate synthase) (Phosphoglycerol geranylgeranyltransferase)
ruditapes_c24737	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_c24737	diaminopimelate biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_c24737	cellular amino acid biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_c24737	lysine biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_s38345	metabolic process	other metabolic processes	P	Glycosyl hydrolase family 109 protein (EC 3.2.1.-)
ruditapes_s38345	oxidation reduction	other metabolic processes	P	Glycosyl hydrolase family 109 protein (EC 3.2.1.-)
ruditapes2_c1187	thiamin biosynthetic process	other metabolic processes	P	Phosphomethylpyrimidine synthase (EC 4.1.99.17) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
ruditapes_s37141	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes_s38743	DNA repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_s38743	DNA repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_s38743	response to DNA damage stimulus	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_s38743	metabolic process	other metabolic processes	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_s38743	base-excision repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_s38743	base-excision repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c5025	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c5025	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c24137	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c24137	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c24137	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c5025	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c5025	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c5025	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c24137	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c24137	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_lrc31664	carbohydrate metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes_lrc31664	cellular metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes_c28242	regulation of ARF GTPase activity	signal transduction	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c28242	DNA repair	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c28242	DNA repair	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c28242	DNA recombination	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c28242	response to DNA damage stimulus	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c19835	pyridoxine biosynthetic process	other metabolic processes	P	D-erythrose-4-phosphate dehydrogenase (E4PDH) (EC 1.2.1.72)
ruditapes_c19835	pyridoxal phosphate biosynthetic process	other metabolic processes	P	D-erythrose-4-phosphate dehydrogenase (E4PDH) (EC 1.2.1.72)
ruditapes_c19835	oxidation reduction	other metabolic processes	P	D-erythrose-4-phosphate dehydrogenase (E4PDH) (EC 1.2.1.72)
ruditapes_c27774	DNA repair	stress response	P	Recombination protein RecR
ruditapes_c27774	DNA repair	DNA metabolism	P	Recombination protein RecR
ruditapes_c27774	response to DNA damage stimulus	stress response	P	Recombination protein RecR
ruditapes_c27774	DNA recombination	DNA metabolism	P	Recombination protein RecR
ruditapes_c3918	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Dihydroorotase (DHOase) (EC 3.5.2.3)
ruditapes_c3918	pyrimidine base biosynthetic process	other metabolic processes	P	Dihydroorotase (DHOase) (EC 3.5.2.3)
ruditapes_c16232	heme O biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_c16232	heme biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes2_c488	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit I (EC 1.6.99.5) (NADH dehydrogenase I subunit I) (NDH-1 subunit I)
ruditapes_c9263	biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes_c9263	coenzyme A biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes_c30820	D-amino acid catabolic process	other metabolic processes	P	D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)
ruditapes_c501	translation	protein metabolism	P	30S ribosomal protein S13
ruditapes_c20615	translation	protein metabolism	P	Elongation factor Ts (EF-Ts)
ruditapes_c20615	translational elongation	protein metabolism	P	Elongation factor Ts (EF-Ts)
ruditapes_c31156	metabolic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c31156	terpenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c31156	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c31156	thiamin biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c9846	leucine biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c9846	cellular amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c9846	carboxylic acid metabolic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c9846	branched chain family amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c7498	ubiquinone biosynthetic process	other metabolic processes	P	Probable ubiquinone biosynthesis protein UbiB
ruditapes2_c3025	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c3025	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c3025	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c3025	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c3025	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_lrc27490	purine nucleotide biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_lrc27490	glutamine metabolic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_lrc27490	GMP biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c17083	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c17083	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c18201	proteolysis	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-)
ruditapes_c18201	protein catabolic process	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-)
ruditapes_c19321	lipoate biosynthetic process	other metabolic processes	P	Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA)
ruditapes_c21389	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c21389	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c21389	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c21389	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_s37852	translation	protein metabolism	P	30S ribosomal protein S9
ruditapes_c13620	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c13620	cellular amino acid biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c13620	carbamoyl phosphate biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c13620	arginine biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c13620	glutamine metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c13620	glutamine catabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c31245	GTP catabolic process	other metabolic processes	P	Peptide chain release factor 3 (RF-3)
ruditapes_c31245	translation	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_c31245	translational termination	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_c31245	translational termination	cell organization and biogenesis	P	Peptide chain release factor 3 (RF-3)
ruditapes2_lrc4397	tetrapyrrole biosynthetic process	other metabolic processes	P	Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes2_lrc4397	porphyrin biosynthetic process	other metabolic processes	P	Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes2_lrc4397	peptidyl-pyrromethane cofactor linkage	protein metabolism	P	Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c9531	heme biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_c9531	heme O biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_c400	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c400	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c20669	oxidation reduction	other metabolic processes	P	L-lactate dehydrogenase (L-LDH) (EC 1.1.1.27)
ruditapes_c20669	glycolysis	other metabolic processes	P	L-lactate dehydrogenase (L-LDH) (EC 1.1.1.27)
ruditapes_c20669	carbohydrate metabolic process	other metabolic processes	P	L-lactate dehydrogenase (L-LDH) (EC 1.1.1.27)
ruditapes_c20669	cellular carbohydrate metabolic process	other metabolic processes	P	L-lactate dehydrogenase (L-LDH) (EC 1.1.1.27)
ruditapes_c12524	tryptophan biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c12524	cellular amino acid biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c12524	aromatic amino acid family biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c12524	tryptophan metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c12524	metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c7082	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c7082	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c7082	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c7082	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c7082	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c3655	ribosome biogenesis	other biological processes	P	GTPase Era
ruditapes_c16820	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c16820	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c16820	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c16820	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c16820	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c16820	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c13011	protein tetramerization	cell organization and biogenesis	P	Protein-export protein SecB 1
ruditapes_c13011	transport	transport	P	Protein-export protein SecB 1
ruditapes_c13011	protein transport	transport	P	Protein-export protein SecB 1
ruditapes_s35092	L-serine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_s35092	one-carbon compound metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_s35092	glycine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_s35092	cellular amino acid biosynthetic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes2_c2483	protein homotetramerization	cell organization and biogenesis	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes2_c2483	oxidation reduction	other metabolic processes	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes2_c2483	tryptophan catabolic process to kynurenine	other metabolic processes	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes2_c2483	tryptophan catabolic process	other metabolic processes	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes2_c5843	cell division	other biological processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c5843	peptidoglycan biosynthetic process	other metabolic processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c5843	cell cycle	cell cycle and proliferation	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c5843	regulation of cell shape	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c5843	cell wall organization	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_lrc6865	dicarboxylic acid transport	transport	P	C4-dicarboxylate transport protein 2
ruditapes_lrc6865	carbohydrate transport	transport	P	C4-dicarboxylate transport protein 2
ruditapes_lrc6865	transport	transport	P	C4-dicarboxylate transport protein 2
ruditapes_c11854	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c18756	histidine biosynthetic process	other metabolic processes	P	Putative imidazole glycerol phosphate synthase subunit hisF2 (EC 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF2) (ImGP synthase subunit hisF2) (IGPS subunit hisF2)
ruditapes_c18756	metabolic process	other metabolic processes	P	Putative imidazole glycerol phosphate synthase subunit hisF2 (EC 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF2) (ImGP synthase subunit hisF2) (IGPS subunit hisF2)
ruditapes_c18756	cellular amino acid biosynthetic process	other metabolic processes	P	Putative imidazole glycerol phosphate synthase subunit hisF2 (EC 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF2) (ImGP synthase subunit hisF2) (IGPS subunit hisF2)
ruditapes_c25996	metabolic process	other metabolic processes	P	Acetyl-coenzyme A synthetase (AcCoA synthetase) (Acs) (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-activating enzyme)
ruditapes_c13382	sodium ion transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes_c13382	transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes_c13382	regulation of pH	other biological processes	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes_c13382	ion transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes_c5153	protein folding	protein metabolism	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c5153	response to stress	stress response	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c19235	cell outer membrane assembly	cell organization and biogenesis	P	LPS-assembly protein LptD (Organic solvent tolerance protein)
ruditapes_c19235	membrane organization	cell organization and biogenesis	P	LPS-assembly protein LptD (Organic solvent tolerance protein)
ruditapes_c19235	response to organic substance	other biological processes	P	LPS-assembly protein LptD (Organic solvent tolerance protein)
ruditapes_c2100	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c2100	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c2100	tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c2100	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c2100	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c2100	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c28429	rRNA processing	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c28429	rRNA methylation	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c28429	methylation	other metabolic processes	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c28429	rRNA modification	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c25789	oxidation reduction	other metabolic processes	P	Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase)
ruditapes_c25789	pyridoxal phosphate biosynthetic process	other metabolic processes	P	Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase)
ruditapes_c25789	pyridoxine biosynthetic process	other metabolic processes	P	Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase)
ruditapes_c24563	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c24563	methylation	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c24563	dTMP biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c21714	mRNA processing	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c21714	biomineral formation	developmental processes	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c21714	RNA splicing	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c21714	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c8452	transport	transport	P	RNA2 polyprotein [Cleaved into: Movement protein; Capsid protein VP35; Capsid protein VP26; Capsid protein VP23]
ruditapes_c8452	"spread of virus within host, cell to cell"	other biological processes	P	RNA2 polyprotein [Cleaved into: Movement protein; Capsid protein VP35; Capsid protein VP26; Capsid protein VP23]
ruditapes_s32816	translation	protein metabolism	P	40S ribosomal protein S20
ruditapes_c2213	eggshell chorion gene amplification	DNA metabolism	P	Protein lin-54 homolog (Myb complex protein of 120 kDa)
ruditapes_c2213	eggshell chorion gene amplification	cell organization and biogenesis	P	Protein lin-54 homolog (Myb complex protein of 120 kDa)
ruditapes_c2213	cell cycle	cell cycle and proliferation	P	Protein lin-54 homolog (Myb complex protein of 120 kDa)
ruditapes_c2213	sperm motility	other biological processes	P	Protein lin-54 homolog (Myb complex protein of 120 kDa)
ruditapes_c2213	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein lin-54 homolog (Myb complex protein of 120 kDa)
ruditapes_c2213	oogenesis	other biological processes	P	Protein lin-54 homolog (Myb complex protein of 120 kDa)
ruditapes_c2213	determination of adult life span	developmental processes	P	Protein lin-54 homolog (Myb complex protein of 120 kDa)
ruditapes_c2213	"transcription, DNA-dependent"	RNA metabolism	P	Protein lin-54 homolog (Myb complex protein of 120 kDa)
ruditapes_c2213	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein lin-54 homolog (Myb complex protein of 120 kDa)
ruditapes_lrc27584	regulation of cell-matrix adhesion	cell adhesion	P	PDZ and LIM domain protein Zasp (Z band alternatively spliced PDZ-motif protein)
ruditapes_c26417	biological_process	other biological processes	P	Protein dopey-1 homolog
ruditapes_c11959	biological_process	other biological processes	P	Protein dopey-1 homolog
ruditapes_c11652	biological_process	other biological processes	P	Protein dopey-1 homolog
ruditapes_c26417	protein transport	transport	P	Protein dopey-1 homolog
ruditapes_lrc39588	biological_process	other biological processes	P	Protein dopey-1 homolog
ruditapes_c11959	transport	transport	P	Protein dopey-1 homolog
ruditapes_c11652	protein transport	transport	P	Protein dopey-1 homolog
ruditapes_lrc39588	protein transport	transport	P	Protein dopey-1 homolog
ruditapes_c11959	protein transport	transport	P	Protein dopey-1 homolog
ruditapes_c11652	transport	transport	P	Protein dopey-1 homolog
ruditapes_c26417	transport	transport	P	Protein dopey-1 homolog
ruditapes_lrc39588	transport	transport	P	Protein dopey-1 homolog
ruditapes_c10657	response to DNA damage stimulus	stress response	P	Cullin-4B (CUL-4B)
ruditapes_c10657	DNA repair	stress response	P	Cullin-4B (CUL-4B)
ruditapes_c10657	DNA repair	DNA metabolism	P	Cullin-4B (CUL-4B)
ruditapes_c10657	cell cycle	cell cycle and proliferation	P	Cullin-4B (CUL-4B)
ruditapes_c10657	positive regulation of protein catabolic process	protein metabolism	P	Cullin-4B (CUL-4B)
ruditapes_c10657	positive regulation of S phase of mitotic cell cycle	cell cycle and proliferation	P	Cullin-4B (CUL-4B)
ruditapes_c10657	ubiquitin-dependent protein catabolic process	protein metabolism	P	Cullin-4B (CUL-4B)
ruditapes_c27478	biological_process	other biological processes	P	Signal peptide peptidase-like 2C (SPP-like 2C) (SPPL2c) (EC 3.4.23.-) (Intramembrane protease 5) (IMP-5)
ruditapes_c27478	proteolysis	protein metabolism	P	Signal peptide peptidase-like 2C (SPP-like 2C) (SPPL2c) (EC 3.4.23.-) (Intramembrane protease 5) (IMP-5)
ruditapes_c19629	metabolic process	other metabolic processes	P	Arylacetamide deacetylase-like 3 (EC 3.1.1.-)
ruditapes_c19629	biological_process	other biological processes	P	Arylacetamide deacetylase-like 3 (EC 3.1.1.-)
ruditapes_c19858	fat cell differentiation	other biological processes	P	Uncharacterized protein KIAA1109 (Fragile site-associated protein homolog)
ruditapes_c19858	lipid metabolic process	other metabolic processes	P	Uncharacterized protein KIAA1109 (Fragile site-associated protein homolog)
ruditapes_c19858	regulation of cell growth	other biological processes	P	Uncharacterized protein KIAA1109 (Fragile site-associated protein homolog)
ruditapes_c19858	adipose tissue development	developmental processes	P	Uncharacterized protein KIAA1109 (Fragile site-associated protein homolog)
ruditapes_c19858	spermatogenesis	other biological processes	P	Uncharacterized protein KIAA1109 (Fragile site-associated protein homolog)
ruditapes_c19858	lipid storage	other biological processes	P	Uncharacterized protein KIAA1109 (Fragile site-associated protein homolog)
ruditapes_c19858	nucleus localization	other biological processes	P	Uncharacterized protein KIAA1109 (Fragile site-associated protein homolog)
ruditapes_c30005	protein amino acid phosphorylation	protein metabolism	P	Obscurin (EC 2.7.11.1) (Obscurin-RhoGEF) (Obscurin-myosin light chain kinase) (Obscurin-MLCK)
ruditapes_c30005	multicellular organismal development	developmental processes	P	Obscurin (EC 2.7.11.1) (Obscurin-RhoGEF) (Obscurin-myosin light chain kinase) (Obscurin-MLCK)
ruditapes_c30005	cell differentiation	other biological processes	P	Obscurin (EC 2.7.11.1) (Obscurin-RhoGEF) (Obscurin-myosin light chain kinase) (Obscurin-MLCK)
ruditapes_c30005	phosphorylation	other metabolic processes	P	Obscurin (EC 2.7.11.1) (Obscurin-RhoGEF) (Obscurin-myosin light chain kinase) (Obscurin-MLCK)
ruditapes_c30005	regulation of Rho protein signal transduction	signal transduction	P	Obscurin (EC 2.7.11.1) (Obscurin-RhoGEF) (Obscurin-myosin light chain kinase) (Obscurin-MLCK)
ruditapes_c29455	biological_process	other biological processes	P	MAP7 domain-containing protein 3
ruditapes_c1410	macroautophagy	stress response	P	UPF0577 protein KIAA1324
ruditapes_c1410	regulation of apoptosis	death	P	UPF0577 protein KIAA1324
ruditapes_c1410	macroautophagy	other metabolic processes	P	UPF0577 protein KIAA1324
ruditapes_c1410	positive regulation of vacuole biogenesis	other biological processes	P	UPF0577 protein KIAA1324
ruditapes_c133	biological_process	other biological processes	P	Uncharacterized protein CXorf23 homolog
ruditapes_lrc30183	transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_lrc30183	striated muscle contraction	other biological processes	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_lrc30183	cellular calcium ion homeostasis	other biological processes	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_lrc30183	ion transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_lrc30183	transmembrane calcium ion transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_lrc30183	transmembrane transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_lrc30183	protein homotetramerization	cell organization and biogenesis	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes2_c2454	autophagy	other metabolic processes	P	Activating molecule in BECN1-regulated autophagy protein 1
ruditapes2_c2454	negative regulation of cell proliferation	cell cycle and proliferation	P	Activating molecule in BECN1-regulated autophagy protein 1
ruditapes2_c2454	embryonic development	developmental processes	P	Activating molecule in BECN1-regulated autophagy protein 1
ruditapes2_c2454	neural tube development	developmental processes	P	Activating molecule in BECN1-regulated autophagy protein 1
ruditapes2_c2454	nervous system development	developmental processes	P	Activating molecule in BECN1-regulated autophagy protein 1
ruditapes2_c2454	multicellular organismal development	developmental processes	P	Activating molecule in BECN1-regulated autophagy protein 1
ruditapes2_c2454	positive regulation of apoptosis	death	P	Activating molecule in BECN1-regulated autophagy protein 1
ruditapes2_c2454	cell differentiation	other biological processes	P	Activating molecule in BECN1-regulated autophagy protein 1
ruditapes_c8416	biosynthetic process	other metabolic processes	P	"NADH dehydrogenase (ubiquinone) complex I, assembly factor 6"
ruditapes_c8416	biological_process	other biological processes	P	"NADH dehydrogenase (ubiquinone) complex I, assembly factor 6"
ruditapes_c25396	biological_process	other biological processes	P	Hemicentin-2
ruditapes_c25396	response to stimulus	other biological processes	P	Hemicentin-2
ruditapes_c13681	biological_process	other biological processes	P	Focadhesin
ruditapes_c20385	protein amino acid dephosphorylation	protein metabolism	P	Tyrosine-protein phosphatase non-receptor type 3 (EC 3.1.3.48)
ruditapes_c20385	dephosphorylation	other metabolic processes	P	Tyrosine-protein phosphatase non-receptor type 3 (EC 3.1.3.48)
ruditapes_c20385	negative regulation of membrane protein ectodomain proteolysis	protein metabolism	P	Tyrosine-protein phosphatase non-receptor type 3 (EC 3.1.3.48)
ruditapes_c20385	negative regulation of mitotic cell cycle	cell cycle and proliferation	P	Tyrosine-protein phosphatase non-receptor type 3 (EC 3.1.3.48)
ruditapes2_c2301	anterior/posterior pattern formation	developmental processes	P	Protein AF-9 (Myeloid/lymphoid or mixed-lineage leukemia translocated to chromosome 3 protein homolog)
ruditapes2_c2301	"transcription, DNA-dependent"	RNA metabolism	P	Protein AF-9 (Myeloid/lymphoid or mixed-lineage leukemia translocated to chromosome 3 protein homolog)
ruditapes2_c2301	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein AF-9 (Myeloid/lymphoid or mixed-lineage leukemia translocated to chromosome 3 protein homolog)
ruditapes2_c2301	segment specification	developmental processes	P	Protein AF-9 (Myeloid/lymphoid or mixed-lineage leukemia translocated to chromosome 3 protein homolog)
ruditapes_c17465	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase UBR4 (EC 6.3.2.-) (N-recognin-4) (Zinc finger UBR1-type protein 1) (p600)
ruditapes_c8645	response to biotic stimulus	other biological processes	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c6143	response to biotic stimulus	other biological processes	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c6143	positive regulation of synaptogenesis	developmental processes	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c6143	positive regulation of synaptogenesis	cell organization and biogenesis	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c6143	positive regulation of synaptogenesis	cell-cell signaling	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c12408	positive regulation of synaptogenesis	cell-cell signaling	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c8645	intracellular protein transport	transport	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c6143	intracellular protein transport	transport	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c12408	intracellular protein transport	transport	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c12408	positive regulation of synaptogenesis	developmental processes	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c12408	positive regulation of synaptogenesis	cell organization and biogenesis	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c8645	positive regulation of synaptogenesis	developmental processes	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c8645	positive regulation of synaptogenesis	cell organization and biogenesis	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c8645	positive regulation of synaptogenesis	cell-cell signaling	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c12408	response to biotic stimulus	other biological processes	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c30010	putrescine biosynthetic process	other metabolic processes	P	"Agmatinase, mitochondrial (EC 3.5.3.11) (Agmatine ureohydrolase) (AUH)"
ruditapes_c30010	spermidine biosynthetic process	other metabolic processes	P	"Agmatinase, mitochondrial (EC 3.5.3.11) (Agmatine ureohydrolase) (AUH)"
ruditapes_c30010	biological_process	other biological processes	P	"Agmatinase, mitochondrial (EC 3.5.3.11) (Agmatine ureohydrolase) (AUH)"
ruditapes_s37241	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	regulation of Rac GTPase activity	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	regulation of Rac GTPase activity	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	regulation of Rac GTPase activity	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	regulation of Rac GTPase activity	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	regulation of Rac GTPase activity	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	regulation of Rac GTPase activity	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1583	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35827	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3343	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s37241	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc39602	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1334	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c29415	sarcomere organization	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	sarcomere organization	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	heart morphogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	protein amino acid phosphorylation	protein metabolism	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	heart development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	forward locomotion	other biological processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	muscle contraction	other biological processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	cardiac myofibril assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	cardiac myofibril assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	striated muscle cell development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	sarcomere organization	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	sarcomere organization	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	phosphorylation	other metabolic processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	forward locomotion	other biological processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	protein amino acid phosphorylation	protein metabolism	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	in utero embryonic development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	cardiac myofibril assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	cardiac myofibril assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	regulation of Rho protein signal transduction	signal transduction	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	regulation of Rho protein signal transduction	signal transduction	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	muscle contraction	other biological processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	forward locomotion	other biological processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	in utero embryonic development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	adult heart development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	striated muscle cell development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	somitogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	somitogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	striated muscle cell development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	phosphorylation	other metabolic processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	protein amino acid phosphorylation	protein metabolism	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	adult heart development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	regulation of Rho protein signal transduction	signal transduction	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	cardiac myofibril assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	cardiac myofibril assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	sarcomere organization	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	sarcomere organization	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	phosphorylation	other metabolic processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	somitogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	in utero embryonic development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	muscle contraction	other biological processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	heart morphogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c29415	heart development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	heart development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c26476	heart morphogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c31218	adult heart development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin)
ruditapes_c25162	meiosis	cell cycle and proliferation	P	Double-strand-break repair protein rad21-like protein 1
ruditapes_c25162	chromosome segregation	other biological processes	P	Double-strand-break repair protein rad21-like protein 1
ruditapes_c25162	meiotic prophase I	cell cycle and proliferation	P	Double-strand-break repair protein rad21-like protein 1
ruditapes_c25162	biological_process	other biological processes	P	Double-strand-break repair protein rad21-like protein 1
ruditapes_c14609	exocytosis	transport	P	Exocyst complex component 3-like protein
ruditapes_c19349	cell adhesion	cell adhesion	P	"Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (Polydom)"
ruditapes_c24908	cell adhesion	cell adhesion	P	"Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (Polydom)"
ruditapes_c19349	biological_process	other biological processes	P	"Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (Polydom)"
ruditapes_c24908	biological_process	other biological processes	P	"Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (Polydom)"
ruditapes2_c3837	protein heterotrimerization	cell organization and biogenesis	P	Collagen alpha-4(VI) chain
ruditapes2_c3837	cell adhesion	cell adhesion	P	Collagen alpha-4(VI) chain
ruditapes2_c1660	cell adhesion	cell adhesion	P	Collagen alpha-4(VI) chain
ruditapes_c3396	protein heterotrimerization	cell organization and biogenesis	P	Collagen alpha-4(VI) chain
ruditapes2_c1660	protein heterotrimerization	cell organization and biogenesis	P	Collagen alpha-4(VI) chain
ruditapes_c1010	protein heterotrimerization	cell organization and biogenesis	P	Collagen alpha-4(VI) chain
ruditapes_c1010	cell adhesion	cell adhesion	P	Collagen alpha-4(VI) chain
ruditapes_c3396	cell adhesion	cell adhesion	P	Collagen alpha-4(VI) chain
ruditapes_c30389	meiotic sister chromatid cohesion	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_c30389	meiotic sister chromatid cohesion	cell organization and biogenesis	P	HORMA domain-containing protein 1
ruditapes_c30389	regulation of homologous chromosome segregation	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_c30389	oogenesis	other biological processes	P	HORMA domain-containing protein 1
ruditapes_c30389	meiosis	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_c30389	cell differentiation	other biological processes	P	HORMA domain-containing protein 1
ruditapes_c30389	meiotic DNA double-strand break formation	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_c30389	meiotic DNA double-strand break formation	DNA metabolism	P	HORMA domain-containing protein 1
ruditapes_c30389	spermatogenesis	other biological processes	P	HORMA domain-containing protein 1
ruditapes_c30389	blastocyst development	developmental processes	P	HORMA domain-containing protein 1
ruditapes_c30389	meiotic recombination checkpoint	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_c30389	synaptonemal complex assembly	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_c30389	synaptonemal complex assembly	cell organization and biogenesis	P	HORMA domain-containing protein 1
ruditapes_c15367	intein-mediated protein splicing	protein metabolism	P	DNA excision repair protein ERCC-6-like (EC 3.6.4.12) (ATP-dependent helicase ERCC6-like)
ruditapes_c15367	mitosis	cell cycle and proliferation	P	DNA excision repair protein ERCC-6-like (EC 3.6.4.12) (ATP-dependent helicase ERCC6-like)
ruditapes_c15367	mitosis	cell organization and biogenesis	P	DNA excision repair protein ERCC-6-like (EC 3.6.4.12) (ATP-dependent helicase ERCC6-like)
ruditapes_c15367	cell division	other biological processes	P	DNA excision repair protein ERCC-6-like (EC 3.6.4.12) (ATP-dependent helicase ERCC6-like)
ruditapes_c15367	cell cycle	cell cycle and proliferation	P	DNA excision repair protein ERCC-6-like (EC 3.6.4.12) (ATP-dependent helicase ERCC6-like)
ruditapes_c29849	mRNA processing	RNA metabolism	P	CCR4-NOT transcription complex subunit 6-like (EC 3.1.13.4)
ruditapes_c29560	"regulation of transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 10 (PR domain-containing protein 10)
ruditapes_c29560	"transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 10 (PR domain-containing protein 10)
ruditapes_c9623	proteolysis	protein metabolism	P	Proteasome subunit beta 1 (EC 3.4.25.1) (20S proteasome beta subunit 1) (Proteasome core protein PsmB 1)
ruditapes_c9623	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta 1 (EC 3.4.25.1) (20S proteasome beta subunit 1) (Proteasome core protein PsmB 1)
ruditapes_c12633	cobalamin biosynthetic process	other metabolic processes	P	UPF0284 protein A9601
ruditapes_lrc37305	phosphorylation	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_lrc37305	cellular amino acid biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_lrc37305	arginine biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c27587	translation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c27587	translational initiation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c27587	methylation	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c27587	biosynthetic process	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes2_lrc4374	spermidine biosynthetic process	other metabolic processes	P	Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (PAPT) (SPDSY)
ruditapes2_lrc4374	polyamine biosynthetic process	other metabolic processes	P	Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (PAPT) (SPDSY)
ruditapes_c8503	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 2 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase II) (FGAM synthase II)
ruditapes_c8503	'de novo' IMP biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 2 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase II) (FGAM synthase II)
ruditapes_c23339	arginine catabolic process	other metabolic processes	P	Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19)
ruditapes_c23339	polyamine biosynthetic process	other metabolic processes	P	Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19)
ruditapes_c23339	spermidine biosynthetic process	other metabolic processes	P	Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19)
ruditapes_lrc32573	oxidation reduction	other metabolic processes	P	Phycocyanobilin:ferredoxin oxidoreductase (EC 1.3.7.5)
ruditapes_c21857	phytochromobilin biosynthetic process	other metabolic processes	P	Phycocyanobilin:ferredoxin oxidoreductase (EC 1.3.7.5)
ruditapes_lrc32573	phytochromobilin biosynthetic process	other metabolic processes	P	Phycocyanobilin:ferredoxin oxidoreductase (EC 1.3.7.5)
ruditapes_c21857	oxidation reduction	other metabolic processes	P	Phycocyanobilin:ferredoxin oxidoreductase (EC 1.3.7.5)
ruditapes_c13946	arginine biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c13946	cellular amino acid metabolic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c13946	cellular amino acid biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c13946	oxidation reduction	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c18474	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c18474	thiamin biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c18474	metabolic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c18474	terpenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c3153	photosynthesis	other metabolic processes	P	Photosystem I assembly protein Ycf4
ruditapes_c18672	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c18672	rRNA methylation	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c18672	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c18801	translation	protein metabolism	P	30S ribosomal protein S19
ruditapes2_c2908	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes2_c2908	tricarboxylic acid cycle	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_c24868	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c24868	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes2_c216	metabolic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes2_c216	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes2_c216	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_c20426	RNA methylation	RNA metabolism	P	Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c20426	rRNA processing	RNA metabolism	P	Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c20426	methylation	other metabolic processes	P	Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c31483	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c31483	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c31483	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c31483	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_lrc21544	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_lrc21544	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_lrc21544	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_lrc21544	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_lrc21544	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_lrc14764	regulation of small GTPase mediated signal transduction	signal transduction	P	Ras-specific guanine nucleotide-releasing factor 2 (Ras-GRF2) (Ras guanine nucleotide exchange factor 2)
ruditapes_lrc14764	small GTPase mediated signal transduction	signal transduction	P	Ras-specific guanine nucleotide-releasing factor 2 (Ras-GRF2) (Ras guanine nucleotide exchange factor 2)
ruditapes_lrc14764	regulation of Rho protein signal transduction	signal transduction	P	Ras-specific guanine nucleotide-releasing factor 2 (Ras-GRF2) (Ras guanine nucleotide exchange factor 2)
ruditapes_c23761	cell cycle	cell cycle and proliferation	P	Peptidoglycan synthase ftsI homolog (EC 2.4.1.129) (Peptidoglycan glycosyltransferase)
ruditapes_c23761	peptidoglycan biosynthetic process	other metabolic processes	P	Peptidoglycan synthase ftsI homolog (EC 2.4.1.129) (Peptidoglycan glycosyltransferase)
ruditapes_c23761	cell division	other biological processes	P	Peptidoglycan synthase ftsI homolog (EC 2.4.1.129) (Peptidoglycan glycosyltransferase)
ruditapes_c23761	regulation of cell shape	cell organization and biogenesis	P	Peptidoglycan synthase ftsI homolog (EC 2.4.1.129) (Peptidoglycan glycosyltransferase)
ruditapes_c23761	peptidoglycan-based cell wall biogenesis	other biological processes	P	Peptidoglycan synthase ftsI homolog (EC 2.4.1.129) (Peptidoglycan glycosyltransferase)
ruditapes_c565	translation	protein metabolism	P	60S ribosomal protein L17
ruditapes_s39873	translation	protein metabolism	P	60S ribosomal protein L38
ruditapes_c10766	oxidation reduction	other metabolic processes	P	NADH-cytochrome b5 reductase 1 (EC 1.6.2.2) (Microsomal cytochrome b reductase)
ruditapes_c18329	metabolic process	other metabolic processes	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Molybdenum cofactor sulfurtransferase)
ruditapes_c18329	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Molybdenum cofactor sulfurtransferase)
ruditapes_c7588	transport	transport	P	Autophagy-related protein 9
ruditapes_c7588	protein transport	transport	P	Autophagy-related protein 9
ruditapes_c7588	autophagy	other metabolic processes	P	Autophagy-related protein 9
ruditapes_c14911	rRNA processing	RNA metabolism	P	rRNA-processing protein efg1
ruditapes_s39037	transport	transport	P	Probable quinate permease (Quinate transporter)
ruditapes2_lrc7501	quinate metabolic process	other metabolic processes	P	Probable quinate permease (Quinate transporter)
ruditapes_s35402	transport	transport	P	Probable quinate permease (Quinate transporter)
ruditapes_lrc37274	transport	transport	P	Probable quinate permease (Quinate transporter)
ruditapes_lrc37274	quinate metabolic process	other metabolic processes	P	Probable quinate permease (Quinate transporter)
ruditapes_lrc37274	transmembrane transport	transport	P	Probable quinate permease (Quinate transporter)
ruditapes_s39037	quinate metabolic process	other metabolic processes	P	Probable quinate permease (Quinate transporter)
ruditapes_s35402	quinate metabolic process	other metabolic processes	P	Probable quinate permease (Quinate transporter)
ruditapes2_lrc7501	transport	transport	P	Probable quinate permease (Quinate transporter)
ruditapes_s35402	transmembrane transport	transport	P	Probable quinate permease (Quinate transporter)
ruditapes2_lrc7501	transmembrane transport	transport	P	Probable quinate permease (Quinate transporter)
ruditapes_s39037	transmembrane transport	transport	P	Probable quinate permease (Quinate transporter)
ruditapes_c2458	proteolysis	protein metabolism	P	Putative metallocarboxypeptidase ecm14 (EC 3.4.17.-)
ruditapes_c2458	cell wall organization	cell organization and biogenesis	P	Putative metallocarboxypeptidase ecm14 (EC 3.4.17.-)
ruditapes2_c741	response to stress	stress response	P	Stress response protein nst1
ruditapes_c11033	proteolysis	protein metabolism	P	Probable zinc metalloprotease An18g03780 (EC 3.4.-.-)
ruditapes_c22866	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c22866	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c18420	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c18420	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c18420	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c18420	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c18420	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c18420	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c18420	biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_lrc17802	biological_process	other biological processes	P	DENN domain-containing protein 5B (Rab6IP1-like protein)
ruditapes_c5128	biological_process	other biological processes	P	DENN domain-containing protein 3
ruditapes_s34657	biological_process	other biological processes	P	Ankyrin and armadillo repeat-containing protein
ruditapes_c18958	biological_process	other biological processes	P	Ankyrin and armadillo repeat-containing protein
ruditapes_lrc32713	spermatogenesis	other biological processes	P	Cation channel sperm-associated protein subunit beta (CatSper-beta)
ruditapes_lrc32713	cell differentiation	other biological processes	P	Cation channel sperm-associated protein subunit beta (CatSper-beta)
ruditapes_lrc32713	multicellular organismal development	developmental processes	P	Cation channel sperm-associated protein subunit beta (CatSper-beta)
ruditapes_lrc32713	sperm capacitation	other biological processes	P	Cation channel sperm-associated protein subunit beta (CatSper-beta)
ruditapes_c9235	lipid biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c9235	lipid A biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c9774	aromatic amino acid family biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c9774	cellular amino acid biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c29327	ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c29327	transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c29327	potassium ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c9453	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c9453	thiamin biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c9453	terpenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c9453	metabolic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c15085	phosphorylation	other metabolic processes	P	Isocitrate dehydrogenase kinase/phosphatase (IDH kinase/phosphatase) (IDHK/P) (EC 2.7.11.5) (EC 3.1.3.-)
ruditapes_c15085	glucose metabolic process	other metabolic processes	P	Isocitrate dehydrogenase kinase/phosphatase (IDH kinase/phosphatase) (IDHK/P) (EC 2.7.11.5) (EC 3.1.3.-)
ruditapes_c15085	tricarboxylic acid cycle	other metabolic processes	P	Isocitrate dehydrogenase kinase/phosphatase (IDH kinase/phosphatase) (IDHK/P) (EC 2.7.11.5) (EC 3.1.3.-)
ruditapes_c15085	glyoxylate cycle	other metabolic processes	P	Isocitrate dehydrogenase kinase/phosphatase (IDH kinase/phosphatase) (IDHK/P) (EC 2.7.11.5) (EC 3.1.3.-)
ruditapes_c15085	dephosphorylation	other metabolic processes	P	Isocitrate dehydrogenase kinase/phosphatase (IDH kinase/phosphatase) (IDHK/P) (EC 2.7.11.5) (EC 3.1.3.-)
ruditapes2_c1120	tRNA processing	RNA metabolism	P	"tRNA (guanine(26)-N(2))-dimethyltransferase (EC 2.1.1.216) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase)"
ruditapes2_c1120	methylation	other metabolic processes	P	"tRNA (guanine(26)-N(2))-dimethyltransferase (EC 2.1.1.216) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase)"
ruditapes_s38576	DNA replication	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_s38576	DNA catabolic process	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_s38576	metabolic process	other metabolic processes	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c14668	carbohydrate catabolic process	other metabolic processes	P	Vicianin hydrolase (VH) (EC 3.2.1.119) (Fragment)
ruditapes_c14668	carbohydrate metabolic process	other metabolic processes	P	Vicianin hydrolase (VH) (EC 3.2.1.119) (Fragment)
ruditapes_c14668	metabolic process	other metabolic processes	P	Vicianin hydrolase (VH) (EC 3.2.1.119) (Fragment)
ruditapes2_lrc4814	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta)
ruditapes_lrc35191	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta)
ruditapes_lrc39530	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta)
ruditapes_c6622	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and SCAN domain-containing protein 12 (Zinc finger protein 96)
ruditapes_c6622	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and SCAN domain-containing protein 12 (Zinc finger protein 96)
ruditapes_c6622	viral reproduction	other biological processes	P	Zinc finger and SCAN domain-containing protein 12 (Zinc finger protein 96)
ruditapes_c12264	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Retina and anterior neural fold homeobox protein 2 (Retina and anterior neural fold homeobox-like protein 1)
ruditapes_c12264	response to stimulus	other biological processes	P	Retina and anterior neural fold homeobox protein 2 (Retina and anterior neural fold homeobox-like protein 1)
ruditapes_c12264	"transcription, DNA-dependent"	RNA metabolism	P	Retina and anterior neural fold homeobox protein 2 (Retina and anterior neural fold homeobox-like protein 1)
ruditapes_c12264	visual perception	other biological processes	P	Retina and anterior neural fold homeobox protein 2 (Retina and anterior neural fold homeobox-like protein 1)
ruditapes2_c2760	epithelial cell differentiation	developmental processes	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes_c11272	"transcription, DNA-dependent"	RNA metabolism	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes2_c2760	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes_c11272	"regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes_c13799	"regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes_c13799	epithelial cell differentiation	developmental processes	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes2_c2760	"regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes_c13799	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes_c11272	epithelial cell differentiation	developmental processes	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes_c11272	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes2_c2760	"transcription, DNA-dependent"	RNA metabolism	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes_c13799	"transcription, DNA-dependent"	RNA metabolism	P	ETS homologous factor (ETS domain-containing transcription factor)
ruditapes_c28523	"regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS translocation variant 3
ruditapes_c28523	"transcription, DNA-dependent"	RNA metabolism	P	ETS translocation variant 3
ruditapes2_c3044	virus-host interaction	other biological processes	P	Vesicle-associated membrane protein-associated protein B (VAMP-B) (VAMP-associated protein B) (VAP-B)
ruditapes2_c3044	endoplasmic reticulum unfolded protein response	signal transduction	P	Vesicle-associated membrane protein-associated protein B (VAMP-B) (VAMP-associated protein B) (VAP-B)
ruditapes2_c3044	endoplasmic reticulum unfolded protein response	stress response	P	Vesicle-associated membrane protein-associated protein B (VAMP-B) (VAMP-associated protein B) (VAP-B)
ruditapes2_c3044	positive regulation of viral genome replication	other biological processes	P	Vesicle-associated membrane protein-associated protein B (VAMP-B) (VAMP-associated protein B) (VAP-B)
ruditapes_c29848	negative regulation of peptidase activity	other biological processes	P	SCO-spondin
ruditapes_c29848	cell adhesion	cell adhesion	P	SCO-spondin
ruditapes2_c3030	proteolysis	protein metabolism	P	Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related protein 4 homolog A)
ruditapes2_c3030	autophagy	other metabolic processes	P	Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related protein 4 homolog A)
ruditapes2_c3030	protein transport	transport	P	Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related protein 4 homolog A)
ruditapes2_c3030	transport	transport	P	Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related protein 4 homolog A)
ruditapes_c924	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_c924	DNA repair	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_c924	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_c924	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_s38781	DNA repair	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_s38781	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc27496	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_s40168	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_s40168	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_s38781	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_s40168	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc27496	DNA repair	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc27496	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc27496	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_s38781	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_s40168	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_s38781	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc27496	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_c924	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_s40168	DNA repair	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_c8439	translation	protein metabolism	P	"Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)"
ruditapes_c31059	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c29776	DNA catabolic process	DNA metabolism	P	Exodeoxyribonuclease 7 large subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit)
ruditapes_c26440	glycogen biosynthetic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c26440	carbohydrate metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c26440	glycogen metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c25704	oxidation reduction	other metabolic processes	P	Ferredoxin--NADP reductase (FNR) (Fd-NADP(+) reductase) (EC 1.18.1.2)
ruditapes_c22166	cell division	other biological processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c22166	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c22166	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c22166	cell cycle	cell cycle and proliferation	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c22166	oxidation reduction	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c22166	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_s32331	glutamine metabolic process	other metabolic processes	P	Glutamine amidotransferase subunit PdxT (EC 2.6.-.-) (Glutamine amidotransferase glutaminase subunit PdxT)
ruditapes_lrc34020	glutamine metabolic process	other metabolic processes	P	Glutamine amidotransferase subunit PdxT (EC 2.6.-.-) (Glutamine amidotransferase glutaminase subunit PdxT)
ruditapes_c30379	GTP catabolic process	other metabolic processes	P	Probable translation initiation factor IF-2
ruditapes_c30379	translational initiation	protein metabolism	P	Probable translation initiation factor IF-2
ruditapes_c30379	translation	protein metabolism	P	Probable translation initiation factor IF-2
ruditapes_c4093	nucleotide biosynthetic process	other metabolic processes	P	Probable thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c4093	dTDP biosynthetic process	other metabolic processes	P	Probable thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c4093	phosphorylation	other metabolic processes	P	Probable thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c19182	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c19182	DNA repair	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c19182	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c19182	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c19182	DNA ligation during DNA repair	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c19182	DNA ligation during DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c19182	cell division	other biological processes	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c19182	cell cycle	cell cycle and proliferation	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c19182	DNA recombination	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c15828	pantothenate biosynthetic process	other metabolic processes	P	Pantothenate synthetase (PS) (EC 6.3.2.1) (Pantoate--beta-alanine ligase) (Pantoate-activating enzyme)
ruditapes_lrc14263	DNA repair	stress response	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_lrc14263	DNA repair	DNA metabolism	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_lrc14263	double-strand break repair	stress response	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_lrc14263	double-strand break repair	DNA metabolism	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_lrc14263	response to DNA damage stimulus	stress response	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_s37091	translation	protein metabolism	P	30S ribosomal protein S17e
ruditapes2_c365	translational initiation	protein metabolism	P	Translation initiation factor 6 (aIF-6)
ruditapes2_c365	mature ribosome assembly	cell organization and biogenesis	P	Translation initiation factor 6 (aIF-6)
ruditapes2_c365	translation	protein metabolism	P	Translation initiation factor 6 (aIF-6)
ruditapes_c18759	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c18759	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c18759	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c18759	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c28864	response to DNA damage stimulus	stress response	P	DNA repair protein REV1 (AtREV1) (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase)
ruditapes_c28864	response to UV-B	other biological processes	P	DNA repair protein REV1 (AtREV1) (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase)
ruditapes_c28864	DNA repair	stress response	P	DNA repair protein REV1 (AtREV1) (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase)
ruditapes_c28864	DNA repair	DNA metabolism	P	DNA repair protein REV1 (AtREV1) (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase)
ruditapes_c14548	phospholipid transport	transport	P	Probable phospholipid-transporting ATPase FetA (EC 3.6.3.1) (ATPase class I type 8B member 2-like protein) (ATPase class I type 8B member 5) (Flippase expressed in testis A)
ruditapes_c14548	lipid transport	transport	P	Probable phospholipid-transporting ATPase FetA (EC 3.6.3.1) (ATPase class I type 8B member 2-like protein) (ATPase class I type 8B member 5) (Flippase expressed in testis A)
ruditapes_c14548	transport	transport	P	Probable phospholipid-transporting ATPase FetA (EC 3.6.3.1) (ATPase class I type 8B member 2-like protein) (ATPase class I type 8B member 5) (Flippase expressed in testis A)
ruditapes_c14548	cation transport	transport	P	Probable phospholipid-transporting ATPase FetA (EC 3.6.3.1) (ATPase class I type 8B member 2-like protein) (ATPase class I type 8B member 5) (Flippase expressed in testis A)
ruditapes_c14548	Golgi organization	cell organization and biogenesis	P	Probable phospholipid-transporting ATPase FetA (EC 3.6.3.1) (ATPase class I type 8B member 2-like protein) (ATPase class I type 8B member 5) (Flippase expressed in testis A)
ruditapes_c29588	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10
ruditapes_c29588	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 10
ruditapes_c10035	nucleotide metabolic process	other metabolic processes	P	Cytosolic 5'-nucleotidase 1A (cN1A) (EC 3.1.3.5) (Cytosolic 5'-nucleotidase IA) (cN-IA)
ruditapes_c10035	adenosine metabolic process	other metabolic processes	P	Cytosolic 5'-nucleotidase 1A (cN1A) (EC 3.1.3.5) (Cytosolic 5'-nucleotidase IA) (cN-IA)
ruditapes_c28307	metabolic process	other metabolic processes	P	Peptidase M20 domain-containing protein 2 (Aminoacylase-1-like protein 2)
ruditapes_c28307	biological_process	other biological processes	P	Peptidase M20 domain-containing protein 2 (Aminoacylase-1-like protein 2)
ruditapes_c5169	biological_process	other biological processes	P	Fer-1-like protein 4
ruditapes2_c1708	protein modification process	protein metabolism	P	Ubiquitin-like modifier-activating enzyme 1 (Ubiquitin-activating enzyme E1)
ruditapes_c12101	metabolic process	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 (Probable methyltransferase C20orf7 homolog, mitochondrial) (EC 2.1.1.-)"
ruditapes_c12101	methylation	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 (Probable methyltransferase C20orf7 homolog, mitochondrial) (EC 2.1.1.-)"
ruditapes_c13149	multicellular organismal development	developmental processes	P	Transmembrane protein 2
ruditapes_c13149	heart looping	developmental processes	P	Transmembrane protein 2
ruditapes_c6983	biological_process	other biological processes	P	BRO1 domain-containing protein BROX (BRO1 domain- and CAAX motif-containing protein)
ruditapes_c28823	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	ATP-dependent RNA helicase CHL1 (EC 3.6.4.13) (Chromosome loss protein 1)
ruditapes_c28823	cell cycle	cell cycle and proliferation	P	ATP-dependent RNA helicase CHL1 (EC 3.6.4.13) (Chromosome loss protein 1)
ruditapes_c3767	pyridine nucleotide biosynthetic process	other metabolic processes	P	Kynurenine 3-monooxygenase (EC 1.14.13.9) (Biosynthesis of nicotinic acid protein 4) (Kynurenine 3-hydroxylase)
ruditapes_c3767	oxidation reduction	other metabolic processes	P	Kynurenine 3-monooxygenase (EC 1.14.13.9) (Biosynthesis of nicotinic acid protein 4) (Kynurenine 3-hydroxylase)
ruditapes_c3767	metabolic process	other metabolic processes	P	Kynurenine 3-monooxygenase (EC 1.14.13.9) (Biosynthesis of nicotinic acid protein 4) (Kynurenine 3-hydroxylase)
ruditapes_c12645	protein transport	transport	P	Conserved oligomeric Golgi complex subunit 6 (COG complex subunit 6) (Component of oligomeric Golgi complex 6)
ruditapes_c12645	intra-Golgi vesicle-mediated transport	transport	P	Conserved oligomeric Golgi complex subunit 6 (COG complex subunit 6) (Component of oligomeric Golgi complex 6)
ruditapes_c12645	transport	transport	P	Conserved oligomeric Golgi complex subunit 6 (COG complex subunit 6) (Component of oligomeric Golgi complex 6)
ruditapes_c2741	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Glucose starvation modulator protein 1
ruditapes_c2741	"transcription, DNA-dependent"	RNA metabolism	P	Glucose starvation modulator protein 1
ruditapes_c23473	ribosome biogenesis	other biological processes	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes_c23473	rRNA processing	RNA metabolism	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes_c28215	iron-sulfur cluster assembly	other metabolic processes	P	Cytosolic Fe-S cluster assembly factor NAR1 (Nuclear architecture-related protein 1)
ruditapes_c7599	metabolic process	other metabolic processes	P	L-rhamnono-gamma-lactonase (EC 3.1.1.65)
ruditapes_c25144	peptidyl-lysine modification to hypusine	protein metabolism	P	Probable deoxyhypusine synthase (DHS) (EC 2.5.1.46)
ruditapes_c25144	"spermidine catabolic process to deoxyhypusine, using deoxyhypusine synthase"	other metabolic processes	P	Probable deoxyhypusine synthase (DHS) (EC 2.5.1.46)
ruditapes_c18695	ATP hydrolysis coupled proton transport	transport	P	V-type ATP synthase alpha chain (EC 3.6.3.14) (V-ATPase subunit A)
ruditapes_c18695	ion transport	transport	P	V-type ATP synthase alpha chain (EC 3.6.3.14) (V-ATPase subunit A)
ruditapes_c18695	transport	transport	P	V-type ATP synthase alpha chain (EC 3.6.3.14) (V-ATPase subunit A)
ruditapes_c18695	ATP metabolic process	other metabolic processes	P	V-type ATP synthase alpha chain (EC 3.6.3.14) (V-ATPase subunit A)
ruditapes_c18695	proton transport	transport	P	V-type ATP synthase alpha chain (EC 3.6.3.14) (V-ATPase subunit A)
ruditapes_c18695	ATP biosynthetic process	other metabolic processes	P	V-type ATP synthase alpha chain (EC 3.6.3.14) (V-ATPase subunit A)
ruditapes_c1564	ATP catabolic process	other metabolic processes	P	ATP-dependent protease ATPase subunit HslU (Unfoldase HslU)
ruditapes_c1564	response to stress	stress response	P	ATP-dependent protease ATPase subunit HslU (Unfoldase HslU)
ruditapes_c8249	tRNA processing	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes_c8249	tRNA 3'-trailer cleavage	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes_c23411	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimM
ruditapes_c23411	rRNA processing	RNA metabolism	P	Ribosome maturation factor RimM
ruditapes_c17707	DNA catabolic process	DNA metabolism	P	Exodeoxyribonuclease 7 large subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit)
ruditapes_c32061	queuosine biosynthetic process	RNA metabolism	P	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA)
ruditapes_c2662	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Dihydroorotase (DHOase) (EC 3.5.2.3)
ruditapes_c2662	pyrimidine base biosynthetic process	other metabolic processes	P	Dihydroorotase (DHOase) (EC 3.5.2.3)
ruditapes_c16459	proteolysis	protein metabolism	P	Lipoprotein signal peptidase (EC 3.4.23.36) (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)
ruditapes_c29542	fatty acid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_c29542	phospholipid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_c24068	arginine metabolic process	other metabolic processes	P	N-succinylarginine dihydrolase (EC 3.5.3.23)
ruditapes_c14735	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.172) (16S rRNA m2G1207 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RsmC)
ruditapes_c14735	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.172) (16S rRNA m2G1207 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RsmC)
ruditapes_c14735	rRNA methylation	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.172) (16S rRNA m2G1207 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RsmC)
ruditapes_c22877	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Molybdenum cofactor guanylyltransferase (MoCo guanylyltransferase) (EC 2.7.7.77) (GTP:molybdopterin guanylyltransferase) (Mo-MPT guanylyltransferase) (Molybdopterin guanylyltransferase) (Molybdopterin-guanine dinucleotide synthase) (MGD synthase)
ruditapes_lrc32728	translation	protein metabolism	P	40S ribosomal protein SA
ruditapes_lrc32692	translation	protein metabolism	P	40S ribosomal protein SA
ruditapes_lrc32494	translation	protein metabolism	P	40S ribosomal protein SA
ruditapes2_c1008	translation	protein metabolism	P	40S ribosomal protein SA
ruditapes_lrc7516	translation	protein metabolism	P	40S ribosomal protein SA
ruditapes_lrc35570	translation	protein metabolism	P	40S ribosomal protein SA
ruditapes_lrc14244	translation	protein metabolism	P	40S ribosomal protein SA
ruditapes_c10615	regulation of proteolysis	protein metabolism	P	Gamma-secretase-activating protein (GSAP) (Protein pigeon homolog) [Cleaved into: Gamma-secretase-activating protein 16 kDa C-terminal form (GSAP-16K)]
ruditapes_c10615	beta-amyloid formation	other metabolic processes	P	Gamma-secretase-activating protein (GSAP) (Protein pigeon homolog) [Cleaved into: Gamma-secretase-activating protein 16 kDa C-terminal form (GSAP-16K)]
ruditapes_c17120	mycothiol biosynthetic process	other metabolic processes	P	L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase (L-Cys:GlcN-Ins ligase) (EC 6.3.1.13) (Mycothiol ligase) (MSH ligase)
ruditapes_s40283	induction of apoptosis	death	P	Serine incorporator 3
ruditapes_s37865	induction of apoptosis	death	P	Serine incorporator 3
ruditapes_s35711	induction of apoptosis	death	P	Serine incorporator 3
ruditapes_c6995	translation	protein metabolism	P	30S ribosomal protein S4e
ruditapes2_c2020	cobalamin biosynthetic process	other metabolic processes	P	Putative cobalt-precorrin-6A synthase [deacetylating] (EC 2.1.1.-)
ruditapes_c4820	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c4820	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c4820	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c4820	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c4820	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes2_lrc5431	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylglycinamide formyltransferase 2 (GART 2) (EC 2.1.2.-) (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) (GAR transformylase 2)
ruditapes2_lrc5431	purine ribonucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylglycinamide formyltransferase 2 (GART 2) (EC 2.1.2.-) (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) (GAR transformylase 2)
ruditapes_c20437	photosynthesis	other metabolic processes	P	Photosystem I assembly protein Ycf4
ruditapes_c28441	regulation of cell cycle	cell cycle and proliferation	P	Ribosome biogenesis protein BOP1 homolog
ruditapes_c28441	rRNA processing	RNA metabolism	P	Ribosome biogenesis protein BOP1 homolog
ruditapes_c28441	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein BOP1 homolog
ruditapes_c19583	ATP catabolic process	other metabolic processes	P	ATPase ASNA1 homolog (EC 3.6.-.-) (Arsenical pump-driving ATPase homolog) (Arsenite-stimulated ATPase)
ruditapes_c19583	transport	transport	P	ATPase ASNA1 homolog (EC 3.6.-.-) (Arsenical pump-driving ATPase homolog) (Arsenite-stimulated ATPase)
ruditapes_c27059	oxidation reduction	other metabolic processes	P	Thymine dioxygenase JBP1 (EC 1.14.11.6) (J-binding protein 1) (Thymidine hydroxylase JBP1)
ruditapes2_c2637	negative regulation of anti-apoptosis	death	P	Tumor necrosis factor alpha-induced protein 8 (TNF alpha-induced protein 8)
ruditapes2_c2637	negative regulation of caspase activity	death	P	Tumor necrosis factor alpha-induced protein 8 (TNF alpha-induced protein 8)
ruditapes2_c2637	apoptosis	death	P	Tumor necrosis factor alpha-induced protein 8 (TNF alpha-induced protein 8)
ruditapes_c10494	positive regulation of Rac GTPase activity	signal transduction	P	Rho GTPase-activating protein 15 (ArhGAP15) (Rho-type GTPase-activating protein 15)
ruditapes_c10494	signal transduction	signal transduction	P	Rho GTPase-activating protein 15 (ArhGAP15) (Rho-type GTPase-activating protein 15)
ruditapes_c10494	regulation of cell shape	cell organization and biogenesis	P	Rho GTPase-activating protein 15 (ArhGAP15) (Rho-type GTPase-activating protein 15)
ruditapes_c21760	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase isoenzyme 5 (AK 5) (EC 2.7.4.3) (ATP-AMP transphosphorylase 5)
ruditapes_c21760	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase isoenzyme 5 (AK 5) (EC 2.7.4.3) (ATP-AMP transphosphorylase 5)
ruditapes_c21760	signal transduction	signal transduction	P	Adenylate kinase isoenzyme 5 (AK 5) (EC 2.7.4.3) (ATP-AMP transphosphorylase 5)
ruditapes_c21760	ATP metabolic process	other metabolic processes	P	Adenylate kinase isoenzyme 5 (AK 5) (EC 2.7.4.3) (ATP-AMP transphosphorylase 5)
ruditapes_c21760	phosphorylation	other metabolic processes	P	Adenylate kinase isoenzyme 5 (AK 5) (EC 2.7.4.3) (ATP-AMP transphosphorylase 5)
ruditapes_c37616	response to biotic stimulus	other biological processes	P	Synapse differentiation-inducing gene protein 1-like (Capucin) (Dispanin subfamily C member 1) (DSPC1) (Transmembrane protein 90A)
ruditapes_c16636	lipid catabolic process	other metabolic processes	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c16636	arachidonic acid secretion	transport	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c16636	icosanoid biosynthetic process	other metabolic processes	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c16636	regulation of cell proliferation	cell cycle and proliferation	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c16636	phospholipid catabolic process	other metabolic processes	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c16636	metabolic process	other metabolic processes	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c26802	DNA duplex unwinding	DNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26802	mitochondrial RNA 3'-end processing	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes2_lrc3377	mitochondrial RNA 3'-end processing	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes2_lrc3377	positive regulation of cell growth	other biological processes	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26802	positive regulation of cell growth	other biological processes	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes2_lrc3377	positive regulation of mitochondrial RNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26802	positive regulation of mitochondrial RNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes2_lrc3377	RNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26802	DNA recombination	DNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26802	mitochondrial mRNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes2_lrc3377	mitochondrial mRNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes2_lrc3377	DNA recombination	DNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26802	anti-apoptosis	death	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes2_lrc3377	DNA duplex unwinding	DNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26802	mitochondrion morphogenesis	cell organization and biogenesis	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes2_lrc3377	anti-apoptosis	death	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26802	RNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes2_lrc3377	mitochondrion morphogenesis	cell organization and biogenesis	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c23303	transport	transport	P	Large neutral amino acids transporter small subunit 4 (L-type amino acid transporter 4) (Solute carrier family 43 member 2)
ruditapes_c23303	transmembrane transport	transport	P	Large neutral amino acids transporter small subunit 4 (L-type amino acid transporter 4) (Solute carrier family 43 member 2)
ruditapes_c23303	amino acid transport	transport	P	Large neutral amino acids transporter small subunit 4 (L-type amino acid transporter 4) (Solute carrier family 43 member 2)
ruditapes_c10430	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit A (eIF3a) (Eukaryotic translation initiation factor 3 subunit 10) (eIF-3-theta)
ruditapes_c10430	formation of translation initiation complex	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit A (eIF3a) (Eukaryotic translation initiation factor 3 subunit 10) (eIF-3-theta)
ruditapes_c10430	formation of translation initiation complex	cell organization and biogenesis	P	Eukaryotic translation initiation factor 3 subunit A (eIF3a) (Eukaryotic translation initiation factor 3 subunit 10) (eIF-3-theta)
ruditapes_c10430	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit A (eIF3a) (Eukaryotic translation initiation factor 3 subunit 10) (eIF-3-theta)
ruditapes_c11259	protein transport	transport	P	Protein SDA1 homolog (SDA1 domain-containing protein 1)
ruditapes_c11259	ribosome biogenesis	other biological processes	P	Protein SDA1 homolog (SDA1 domain-containing protein 1)
ruditapes_c11259	transport	transport	P	Protein SDA1 homolog (SDA1 domain-containing protein 1)
ruditapes_s33210	regulation of small GTPase mediated signal transduction	signal transduction	P	RAS guanyl-releasing protein 1
ruditapes_s33210	small GTPase mediated signal transduction	signal transduction	P	RAS guanyl-releasing protein 1
ruditapes_s33210	cell differentiation	other biological processes	P	RAS guanyl-releasing protein 1
ruditapes_c24541	ribosome biogenesis	other biological processes	P	GTPase Der (GTP-binding protein EngA)
ruditapes_c14663	tRNA processing	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c14663	tRNA wobble uridine modification	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes2_c5552	translation	protein metabolism	P	Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.-)
ruditapes_lrc23864	translational termination	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_lrc23864	translational termination	cell organization and biogenesis	P	Peptide chain release factor 3 (RF-3)
ruditapes_lrc23864	translation	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_lrc23864	GTP catabolic process	other metabolic processes	P	Peptide chain release factor 3 (RF-3)
ruditapes_c7911	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_lrc32879	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32879	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc33070	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32981	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc29121	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4587	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32981	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4590	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4590	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32425	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc38626	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc33282	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc38626	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4590	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32425	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc38626	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32425	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc6743	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4587	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc38020	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc33070	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4587	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32981	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc38626	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc33282	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4584	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32879	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32879	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc3676	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4584	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32981	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc33070	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc33282	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4587	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc3676	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc6743	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc38020	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc6743	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc6743	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc3676	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc29121	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc29121	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc29121	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc38020	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32879	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc3676	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc3676	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4584	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc33282	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4587	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc33282	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc38020	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4590	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4590	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4584	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc4584	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32981	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc38020	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc33070	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc38626	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc29121	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_lrc6743	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32425	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc32425	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc33070	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_c4483	translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_lrc33319	asparaginyl-tRNA aminoacylation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_lrc33319	asparaginyl-tRNA aminoacylation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_lrc33319	translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_lrc33319	tRNA aminoacylation for protein translation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c4483	tRNA aminoacylation for protein translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c4483	tRNA aminoacylation for protein translation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c4483	asparaginyl-tRNA aminoacylation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c4483	asparaginyl-tRNA aminoacylation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_lrc33319	tRNA aminoacylation for protein translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes2_c1448	phosphorylation	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes2_c1448	organic acid metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes2_c1448	metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c17397	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c17397	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c17397	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c490	translation	protein metabolism	P	50S ribosomal protein L22
ruditapes_c14346	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c14346	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c14346	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c14346	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c14346	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c30864	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c30864	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c30864	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c30864	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c30864	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c23298	oxidation reduction	other metabolic processes	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c23298	queuosine biosynthetic process	RNA metabolism	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c12558	heme biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_c12558	heme O biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_c30899	metabolic process	other metabolic processes	P	2-keto-4-pentenoate hydratase (EC 4.2.1.80) (2-hydroxypentadienoic acid hydratase)
ruditapes_c30899	aromatic compound catabolic process	other metabolic processes	P	2-keto-4-pentenoate hydratase (EC 4.2.1.80) (2-hydroxypentadienoic acid hydratase)
ruditapes_c22914	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c22914	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7)
ruditapes2_c1694	protein modification process	protein metabolism	P	Tubulin polyglutamylase TTLL6 (EC 6.-.-.-) (Tubulin--tyrosine ligase-like protein 6)
ruditapes2_c1694	protein polyglutamylation	protein metabolism	P	Tubulin polyglutamylase TTLL6 (EC 6.-.-.-) (Tubulin--tyrosine ligase-like protein 6)
ruditapes_c13358	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c13358	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c13988	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c13988	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c13988	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c13988	oxidation reduction	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c21301	thiamin biosynthetic process	other metabolic processes	P	Phosphomethylpyrimidine synthase (EC 4.1.99.17) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
ruditapes_c20936	SOS response	stress response	P	LexA repressor (EC 3.4.21.88)
ruditapes_c20936	"regulation of transcription, DNA-dependent"	RNA metabolism	P	LexA repressor (EC 3.4.21.88)
ruditapes_c20936	proteolysis	protein metabolism	P	LexA repressor (EC 3.4.21.88)
ruditapes_c20936	DNA replication	DNA metabolism	P	LexA repressor (EC 3.4.21.88)
ruditapes_c20936	response to DNA damage stimulus	stress response	P	LexA repressor (EC 3.4.21.88)
ruditapes_c20936	DNA repair	stress response	P	LexA repressor (EC 3.4.21.88)
ruditapes_c20936	DNA repair	DNA metabolism	P	LexA repressor (EC 3.4.21.88)
ruditapes_c20936	"transcription, DNA-dependent"	RNA metabolism	P	LexA repressor (EC 3.4.21.88)
ruditapes_c9032	GTP metabolic process	other metabolic processes	P	Deoxyguanosinetriphosphate triphosphohydrolase-like protein
ruditapes_c9813	transport	transport	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c9813	oxidation reduction	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c9813	ATP synthesis coupled electron transport	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c29164	fatty acid biosynthetic process	other metabolic processes	P	"Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)"
ruditapes_c29164	lipid biosynthetic process	other metabolic processes	P	"Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)"
ruditapes_c25950	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c25950	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c10736	peptidyl-diphthamide biosynthetic process from peptidyl-histidine	protein metabolism	P	Diphthamide biosynthesis protein 2 (DPH2 homolog)
ruditapes_c15108	transport	transport	P	Ubiquitin-like protein 4A
ruditapes_c5838	replicative cell aging	other biological processes	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes_c5838	positive regulation of cell proliferation	cell cycle and proliferation	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes2_c308	replicative cell aging	other biological processes	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes_c5838	cellular response to reactive oxygen species	stress response	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes_c903	positive regulation of cell proliferation	cell cycle and proliferation	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes_c5838	defense response to bacterium	stress response	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes_c903	cellular response to reactive oxygen species	stress response	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes2_c308	positive regulation of cell proliferation	cell cycle and proliferation	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes2_c308	defense response to bacterium	stress response	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes_c903	replicative cell aging	other biological processes	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes2_c308	cellular response to reactive oxygen species	stress response	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes_c903	defense response to bacterium	stress response	P	Reactive oxygen species modulator 1 (ROS modulator 1) (Protein MGR2 homolog)
ruditapes_c12919	biological_process	other biological processes	P	TBCC domain-containing protein 1
ruditapes_c20211	electron transport chain	other metabolic processes	P	Putative ferric-chelate reductase 1 (EC 1.-.-.-)
ruditapes_c20211	oxidation reduction	other metabolic processes	P	Putative ferric-chelate reductase 1 (EC 1.-.-.-)
ruditapes_c20211	transport	transport	P	Putative ferric-chelate reductase 1 (EC 1.-.-.-)
ruditapes_c22847	proteolysis	protein metabolism	P	Metacaspase-1 (EC 3.4.22.-)
ruditapes_c22847	apoptosis	death	P	Metacaspase-1 (EC 3.4.22.-)
ruditapes_c5258	lipid metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c5258	lipid catabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c5258	phosphatidylcholine metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c5258	metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c23386	ribosome biogenesis	other biological processes	P	Pre-rRNA-processing protein IPI1
ruditapes_c23386	rRNA processing	RNA metabolism	P	Pre-rRNA-processing protein IPI1
ruditapes_c26442	transport	transport	P	Probable lysosomal cobalamin transporter
ruditapes_c24644	regulation of defense response to virus	stress response	P	Dicer-like protein 2 [Includes: Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent helicase DCL2 (EC 3.6.4.-)]
ruditapes_c24644	RNA processing	RNA metabolism	P	Dicer-like protein 2 [Includes: Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent helicase DCL2 (EC 3.6.4.-)]
ruditapes_c24644	response to virus	other biological processes	P	Dicer-like protein 2 [Includes: Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent helicase DCL2 (EC 3.6.4.-)]
ruditapes_c23862	transport	transport	P	Nuclear protein localization protein 4
ruditapes_c23862	mRNA transport	transport	P	Nuclear protein localization protein 4
ruditapes_c23862	protein transport	transport	P	Nuclear protein localization protein 4
ruditapes2_c6314	metabolic process	other metabolic processes	P	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) (ATP-sulfurylase small subunit) (Sulfate adenylate transferase) (SAT)
ruditapes2_c6314	sulfate reduction	other metabolic processes	P	Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) (ATP-sulfurylase small subunit) (Sulfate adenylate transferase) (SAT)
ruditapes_c17475	transport	transport	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes_c17475	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes_c20611	cellular amino acid biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c20611	lysine biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c20611	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c20611	metabolic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c20611	diaminopimelate biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_lrc30545	rRNA processing	RNA metabolism	P	Ribosome-binding factor A
ruditapes_lrc36263	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36263	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36877	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36263	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36263	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36263	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36877	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36877	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc37753	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc37753	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc37753	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36877	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36877	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc37753	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc37753	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c6565	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c27124	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c27124	oxidation reduction	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes2_c2184	pyrimidine base metabolic process	other metabolic processes	P	Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)
ruditapes2_c2184	metabolic process	other metabolic processes	P	Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)
ruditapes2_c2184	pyrimidine nucleoside metabolic process	other metabolic processes	P	Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)
ruditapes_c19300	histidine catabolic process	other metabolic processes	P	Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase) (Formiminoglutamate hydrolase)
ruditapes_c19300	histidine metabolic process	other metabolic processes	P	Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase) (Formiminoglutamate hydrolase)
ruditapes_c10568	cellular process	other biological processes	P	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Proline dipeptidase) (Prolidase)
ruditapes_c10568	proteolysis	protein metabolism	P	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Proline dipeptidase) (Prolidase)
ruditapes_c15137	prolyl-tRNA aminoacylation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c15137	prolyl-tRNA aminoacylation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c15137	translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c15137	tRNA aminoacylation for protein translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c15137	tRNA aminoacylation for protein translation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_s36414	oxidation reduction	other metabolic processes	P	Ferredoxin--NADP reductase (FNR) (Fd-NADP(+) reductase) (EC 1.18.1.2)
ruditapes_c10169	tRNA processing	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c10169	tRNA modification	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c10169	GTP catabolic process	other metabolic processes	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c7495	L-serine biosynthetic process	other metabolic processes	P	Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) (PSAT)
ruditapes_c7495	pyridoxine biosynthetic process	other metabolic processes	P	Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) (PSAT)
ruditapes_c7495	metabolic process	other metabolic processes	P	Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) (PSAT)
ruditapes_c7495	cellular amino acid biosynthetic process	other metabolic processes	P	Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) (PSAT)
ruditapes_c13505	RNA splicing	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c13505	biomineral formation	developmental processes	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c13505	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c13505	mRNA processing	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c17533	biological_process	other biological processes	P	UPF0505 protein C16orf62 homolog
ruditapes2_c3241	purine salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c36193	purine salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes2_c3241	xanthine metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes2_c3241	purine ribonucleoside salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c36193	xanthine metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes2_c3241	nucleoside metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c36193	nucleoside metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c36193	purine ribonucleoside salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c24426	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c24426	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c24426	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c24426	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c24426	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12862	oxidation reduction	other metabolic processes	P	Na(+)-translocating NADH-quinone reductase subunit B (Na(+)-NQR subunit B) (Na(+)-translocating NQR subunit B) (EC 1.6.5.-) (NQR complex subunit B) (NQR-1 subunit B)
ruditapes_c12862	sodium ion transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit B (Na(+)-NQR subunit B) (Na(+)-translocating NQR subunit B) (EC 1.6.5.-) (NQR complex subunit B) (NQR-1 subunit B)
ruditapes_c12862	ion transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit B (Na(+)-NQR subunit B) (Na(+)-translocating NQR subunit B) (EC 1.6.5.-) (NQR complex subunit B) (NQR-1 subunit B)
ruditapes_c12862	transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit B (Na(+)-NQR subunit B) (Na(+)-translocating NQR subunit B) (EC 1.6.5.-) (NQR complex subunit B) (NQR-1 subunit B)
ruditapes_c12862	respiratory electron transport chain	other metabolic processes	P	Na(+)-translocating NADH-quinone reductase subunit B (Na(+)-NQR subunit B) (Na(+)-translocating NQR subunit B) (EC 1.6.5.-) (NQR complex subunit B) (NQR-1 subunit B)
ruditapes2_c522	purine base metabolic process	other metabolic processes	P	Ureidoglycolate hydrolase (EC 3.5.3.19)
ruditapes2_c522	allantoin catabolic process	other metabolic processes	P	Ureidoglycolate hydrolase (EC 3.5.3.19)
ruditapes_c5373	uracil catabolic process	other metabolic processes	P	Pyrimidine monooxygenase RutA (EC 1.14.99.46)
ruditapes_c5373	oxidation reduction	other metabolic processes	P	Pyrimidine monooxygenase RutA (EC 1.14.99.46)
ruditapes_c29760	translation	protein metabolism	P	50S ribosomal protein L33
ruditapes_lrc26831	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_lrc26831	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_lrc26831	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c23289	phosphorylation	other metabolic processes	P	Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid kinase)
ruditapes_c23289	metabolic process	other metabolic processes	P	Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid kinase)
ruditapes_c23289	coenzyme A biosynthetic process	other metabolic processes	P	Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid kinase)
ruditapes_c26065	thiamin biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c26065	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c26065	metabolic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c26065	terpenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c30453	biopolymer modification	other metabolic processes	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c30453	tRNA processing	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c30453	tRNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c30453	RNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_s38008	transmembrane transport	transport	P	Multidrug resistance protein MdtH
ruditapes_s38008	transport	transport	P	Multidrug resistance protein MdtH
ruditapes_c2497	trehalose biosynthetic process	other metabolic processes	P	"Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) (Osmoregulatory trehalose synthesis protein A) (Trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase)"
ruditapes2_lrc3590	tRNA processing	RNA metabolism	P	tRNA threonylcarbamoyladenosine biosynthesis protein RimN (t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN)
ruditapes2_c402	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_c402	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_c402	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c29582	protein folding	protein metabolism	P	Prefoldin subunit beta (GimC subunit beta)
ruditapes_c7653	"regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit N (EC 2.7.7.6)
ruditapes_c7653	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit N (EC 2.7.7.6)
ruditapes_c14183	GTP metabolic process	other metabolic processes	P	Deoxyguanosinetriphosphate triphosphohydrolase-like protein
ruditapes_c27045	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Cyclic pyranopterin monophosphate synthase accessory protein (Molybdenum cofactor biosynthesis protein C)
ruditapes2_c252	ion transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes2_c452	transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes2_c452	regulation of pH	other biological processes	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes2_c309	ion transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes2_c252	sodium ion transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes2_c309	sodium ion transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes2_c452	sodium ion transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes2_c252	regulation of pH	other biological processes	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes2_c252	transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes2_c452	ion transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes2_c309	transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes2_c309	regulation of pH	other biological processes	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes_c5107	response to DNA damage stimulus	stress response	P	Recombination protein RecR
ruditapes_c5107	DNA repair	stress response	P	Recombination protein RecR
ruditapes_c5107	DNA repair	DNA metabolism	P	Recombination protein RecR
ruditapes_c5107	DNA recombination	DNA metabolism	P	Recombination protein RecR
ruditapes_c19687	fatty acid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_c19687	phospholipid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_lrc35646	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_lrc35646	metabolic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_lrc35646	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_c10836	aromatic amino acid family biosynthetic process	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c10836	oxidation reduction	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c10836	cellular amino acid biosynthetic process	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes2_c1452	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes2_c1452	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes_c3223	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes_c3223	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes_c3223	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes_c3223	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes2_c1452	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes2_c1452	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes_c7826	arginine metabolic process	other metabolic processes	P	N-succinylarginine dihydrolase (EC 3.5.3.23)
ruditapes_c15181	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes2_c2169	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes2_c2169	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes2_c2169	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes2_c2169	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes2_c2169	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c28478	cellular amino acid metabolic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c28478	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c28478	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_s37084	fatty acid metabolic process	other metabolic processes	P	3-hydroxypropionyl-coenzyme A dehydratase (3-hydroxypropionyl-CoA dehydratase) (EC 4.2.1.116)
ruditapes_s37084	lipid metabolic process	other metabolic processes	P	3-hydroxypropionyl-coenzyme A dehydratase (3-hydroxypropionyl-CoA dehydratase) (EC 4.2.1.116)
ruditapes_s37084	metabolic process	other metabolic processes	P	3-hydroxypropionyl-coenzyme A dehydratase (3-hydroxypropionyl-CoA dehydratase) (EC 4.2.1.116)
ruditapes_c24970	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c24970	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c24970	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c2187	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c2187	tRNA aminoacylation for protein translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c2187	tRNA aminoacylation for protein translation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c2187	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c2187	tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c2187	translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c2187	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c18418	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 1 (FBPase class 1) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1)"
ruditapes_c18418	reductive pentose-phosphate cycle	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 1 (FBPase class 1) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1)"
ruditapes_c4124	lipoate biosynthetic process	other metabolic processes	P	Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA)
ruditapes_c19317	translation	protein metabolism	P	50S ribosomal protein L33
ruditapes_s38555	pathogenesis	other biological processes	P	Omega-hexatoxin-Ar1b (Omega-HXTX-Ar1b) (Omega-atracotoxin-Ar1b) (Omega-ACTX-Ar1b)
ruditapes2_c2079	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit F (eIF3f) (Deubiquitinating enzyme eIF3f) (EC 3.4.19.12) (Eukaryotic translation initiation factor 3 subunit 5) (eIF-3-epsilon) (eIF3 p47)
ruditapes2_c2079	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit F (eIF3f) (Deubiquitinating enzyme eIF3f) (EC 3.4.19.12) (Eukaryotic translation initiation factor 3 subunit 5) (eIF-3-epsilon) (eIF3 p47)
ruditapes_c5964	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 4 (CDPK 4) (StCDPK4) (EC 2.7.11.1)
ruditapes_c5964	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 4 (CDPK 4) (StCDPK4) (EC 2.7.11.1)
ruditapes_s40035	proteolysis	protein metabolism	P	Pro-apoptotic serine protease nma111 (EC 3.4.21.-)
ruditapes_s40035	apoptosis	death	P	Pro-apoptotic serine protease nma111 (EC 3.4.21.-)
ruditapes_c21252	translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c21252	tRNA aminoacylation for protein translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c21252	tRNA aminoacylation for protein translation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c21252	valyl-tRNA aminoacylation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c21252	valyl-tRNA aminoacylation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c7808	translation	protein metabolism	P	30S ribosomal protein S14
ruditapes_c24806	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c24806	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c24806	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c24806	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c24806	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c24806	cell division	other biological processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_lrc18290	GTP catabolic process	other metabolic processes	P	Translation initiation factor IF-2
ruditapes_lrc18290	translational initiation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_lrc18290	translation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_c24415	tRNA processing	RNA metabolism	P	tRNA(Ile)-lysidine synthase (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase)
ruditapes_c30688	translation	protein metabolism	P	30S ribosomal protein S2
ruditapes_s38025	DNA catabolic process	DNA metabolism	P	Exodeoxyribonuclease 7 large subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit)
ruditapes2_lrc4192	DNA catabolic process	DNA metabolism	P	Exodeoxyribonuclease 7 large subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit)
ruditapes_c29494	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c29494	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c29494	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c18195	protein folding	protein metabolism	P	Chaperone protein HscA homolog
ruditapes_c18195	ATP catabolic process	other metabolic processes	P	Chaperone protein HscA homolog
ruditapes_c18195	iron-sulfur cluster assembly	other metabolic processes	P	Chaperone protein HscA homolog
ruditapes_c2405	fatty acid biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_c2405	lipid A biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_c2405	lipid biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_c17782	queuosine biosynthetic process	RNA metabolism	P	7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
ruditapes_c18708	proteolysis	protein metabolism	P	Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase)
ruditapes_c18708	protein metabolic process	protein metabolism	P	Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase)
ruditapes_c13646	queuosine biosynthetic process	RNA metabolism	P	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA)
ruditapes_c6672	L-serine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c6672	cellular amino acid biosynthetic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c6672	one-carbon compound metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c6672	glycine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c21923	DNA repair	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c21923	DNA repair	DNA metabolism	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c21923	response to DNA damage stimulus	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c21923	nucleotide-excision repair	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c21923	nucleotide-excision repair	DNA metabolism	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c21923	metabolic process	other metabolic processes	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c21923	base-excision repair	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c21923	base-excision repair	DNA metabolism	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_lrc10487	glutamine metabolic process	other metabolic processes	P	Cobyric acid synthase
ruditapes_lrc10487	cobalamin biosynthetic process	other metabolic processes	P	Cobyric acid synthase
ruditapes_s39859	lipid catabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3-A (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-3-A) (Phospholipase C-delta-3-A) (PLC-delta-3-A)"
ruditapes_s39859	lipid metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3-A (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-3-A) (Phospholipase C-delta-3-A) (PLC-delta-3-A)"
ruditapes_s39859	signal transduction	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3-A (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-3-A) (Phospholipase C-delta-3-A) (PLC-delta-3-A)"
ruditapes_c9819	biological_process	other biological processes	P	Transmembrane protein 17B
ruditapes2_c1820	spindle organization	cell cycle and proliferation	P	Centrosomal protein kizuna (Polo-like kinase 1 substrate 1)
ruditapes2_c1820	spindle organization	cell organization and biogenesis	P	Centrosomal protein kizuna (Polo-like kinase 1 substrate 1)
ruditapes_c22856	metabolic process	other metabolic processes	P	"Arginine biosynthesis bifunctional protein ArgJ, mitochondrial [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (GAT) (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS)]"
ruditapes_c22856	arginine biosynthetic process	other metabolic processes	P	"Arginine biosynthesis bifunctional protein ArgJ, mitochondrial [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (GAT) (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS)]"
ruditapes_c22856	cellular amino acid biosynthetic process	other metabolic processes	P	"Arginine biosynthesis bifunctional protein ArgJ, mitochondrial [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (GAT) (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS)]"
ruditapes_lrc16587	apoptosis	death	P	Pheromone-processing carboxypeptidase KEX1 (EC 3.4.16.6) (Carboxypeptidase D)
ruditapes_lrc16587	proteolysis	protein metabolism	P	Pheromone-processing carboxypeptidase KEX1 (EC 3.4.16.6) (Carboxypeptidase D)
ruditapes_c19057	rRNA processing	RNA metabolism	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes_c19057	ribosome biogenesis	other biological processes	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes_c20228	conjugation	other biological processes	P	Plasma membrane fusion protein PRM1
ruditapes_c30538	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes_c30538	methylation	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes_c30538	phospholipid metabolic process	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes_s39485	response to stress	stress response	P	Stress response protein NST1
ruditapes_lrc36444	pyridine nucleotide biosynthetic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_lrc37375	NAD biosynthetic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c36368	metabolic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_lrc36444	tryptophan catabolic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c36368	pyridine nucleotide biosynthetic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_lrc36444	metabolic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_lrc37375	metabolic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c36368	tryptophan catabolic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_lrc37375	pyridine nucleotide biosynthetic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_lrc37375	tryptophan catabolic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_lrc36444	NAD biosynthetic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c36368	NAD biosynthetic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c21944	cell volume homeostasis	other biological processes	P	Protein LOT5
ruditapes_c21944	chloride transport	transport	P	Protein LOT5
ruditapes_c31385	protein transport	transport	P	Autophagy-related protein 3 (Autophagy-related E2-like conjugation enzyme ATG3)
ruditapes_c31385	transport	transport	P	Autophagy-related protein 3 (Autophagy-related E2-like conjugation enzyme ATG3)
ruditapes_c31385	autophagy	other metabolic processes	P	Autophagy-related protein 3 (Autophagy-related E2-like conjugation enzyme ATG3)
ruditapes_c30731	fatty acid biosynthetic process	other metabolic processes	P	Very-long-chain 3-oxoacyl-CoA reductase (EC 1.1.1.330) (3-ketoacyl-CoA reductase) (3-ketoreductase) (KAR) (Microsomal beta-keto-reductase)
ruditapes_c30731	oxidation reduction	other metabolic processes	P	Very-long-chain 3-oxoacyl-CoA reductase (EC 1.1.1.330) (3-ketoacyl-CoA reductase) (3-ketoreductase) (KAR) (Microsomal beta-keto-reductase)
ruditapes_c30731	metabolic process	other metabolic processes	P	Very-long-chain 3-oxoacyl-CoA reductase (EC 1.1.1.330) (3-ketoacyl-CoA reductase) (3-ketoreductase) (KAR) (Microsomal beta-keto-reductase)
ruditapes_c30731	lipid biosynthetic process	other metabolic processes	P	Very-long-chain 3-oxoacyl-CoA reductase (EC 1.1.1.330) (3-ketoacyl-CoA reductase) (3-ketoreductase) (KAR) (Microsomal beta-keto-reductase)
ruditapes2_c2443	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10
ruditapes2_c2443	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 10
ruditapes_c2332	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 1 1 (FBPase class 1 1) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 1)"
ruditapes_c2332	reductive pentose-phosphate cycle	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 1 1 (FBPase class 1 1) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 1)"
ruditapes_c20619	DNA repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c20619	DNA repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c20619	response to DNA damage stimulus	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c20619	metabolic process	other metabolic processes	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c20619	base-excision repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c20619	base-excision repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c9894	translation	protein metabolism	P	50S ribosomal protein L31 type B
ruditapes_c20904	alanine metabolic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c20904	regulation of cell shape	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c20904	peptidoglycan biosynthetic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c20904	cell wall organization	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_c1396	lipopolysaccharide biosynthetic process	other metabolic processes	P	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase)
ruditapes_c21870	proteolysis	protein metabolism	P	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp)
ruditapes_c17856	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c17856	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c17856	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes2_c2646	regulation of cell cycle	cell cycle and proliferation	P	Probable septum site-determining protein MinC
ruditapes2_c2646	cell cycle	cell cycle and proliferation	P	Probable septum site-determining protein MinC
ruditapes2_c2646	barrier septum formation	cell organization and biogenesis	P	Probable septum site-determining protein MinC
ruditapes2_c2646	regulation of cell division	other biological processes	P	Probable septum site-determining protein MinC
ruditapes2_c2646	cell division	other biological processes	P	Probable septum site-determining protein MinC
ruditapes2_c2646	cell morphogenesis	cell organization and biogenesis	P	Probable septum site-determining protein MinC
ruditapes_c26271	transport	transport	P	Probable potassium transport system protein kup
ruditapes_c26271	potassium ion transport	transport	P	Probable potassium transport system protein kup
ruditapes_c26271	ion transport	transport	P	Probable potassium transport system protein kup
ruditapes_c23453	translation	protein metabolism	P	50S ribosomal protein L33
ruditapes_c18172	double-strand break repair via nonhomologous end joining	stress response	P	Probable DNA repair protein Fjoh
ruditapes_c18172	double-strand break repair via nonhomologous end joining	DNA metabolism	P	Probable DNA repair protein Fjoh
ruditapes_c18172	DNA repair	stress response	P	Probable DNA repair protein Fjoh
ruditapes_c18172	DNA repair	DNA metabolism	P	Probable DNA repair protein Fjoh
ruditapes_c18172	response to DNA damage stimulus	stress response	P	Probable DNA repair protein Fjoh
ruditapes_c16124	translation	protein metabolism	P	50S ribosomal protein L19
ruditapes_c4974	proteolysis	protein metabolism	P	Proline iminopeptidase (PIP) (EC 3.4.11.5) (Prolyl aminopeptidase) (PAP)
ruditapes_c30091	regulation of translation	protein metabolism	P	50S ribosomal protein L1
ruditapes_c30091	translation	protein metabolism	P	50S ribosomal protein L1
ruditapes_c22499	gluconeogenesis	other metabolic processes	P	Phosphoenolpyruvate carboxykinase [ATP] (PEP carboxykinase) (PEPCK) (EC 4.1.1.49) (Phosphoenolpyruvate carboxylase)
ruditapes_c18715	translation	protein metabolism	P	50S ribosomal protein L25 (General stress protein CTC)
ruditapes_c19440	translation	protein metabolism	P	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC 6.3.5.-)
ruditapes_lrc34420	rRNA processing	RNA metabolism	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_lrc34420	RNA methylation	RNA metabolism	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_lrc34420	methylation	other metabolic processes	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c14645	adenine salvage	other metabolic processes	P	Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7)
ruditapes_c14645	nucleoside metabolic process	other metabolic processes	P	Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7)
ruditapes_c14645	purine ribonucleoside salvage	other metabolic processes	P	Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7)
ruditapes_c13152	peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid	protein metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c13152	RNA modification	RNA metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c13152	biopolymer modification	other metabolic processes	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes2_c3077	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes2_c3077	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes2_c3077	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes2_c3077	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes2_c3077	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes2_c3077	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_s38696	porphyrin biosynthetic process	other metabolic processes	P	Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37)
ruditapes_c316	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes_c316	transport	transport	P	Protein translocase subunit SecA
ruditapes_c316	protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c316	protein import	transport	P	Protein translocase subunit SecA
ruditapes_c316	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c12931	translation	protein metabolism	P	30S ribosomal protein S3
ruditapes_c10418	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_lrc9383	tRNA 3'-trailer cleavage	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes_lrc9383	tRNA processing	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes_c11445	oxidation reduction	other metabolic processes	P	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Peptide-methionine (R)-S-oxide reductase)
ruditapes_c26848	oxidation reduction	other metabolic processes	P	NAD(P)H-quinone oxidoreductase subunit L (EC 1.6.5.-) (NAD(P)H dehydrogenase I subunit L) (NDH-1 subunit L) (NDH-L)
ruditapes_c26848	transport	transport	P	NAD(P)H-quinone oxidoreductase subunit L (EC 1.6.5.-) (NAD(P)H dehydrogenase I subunit L) (NDH-1 subunit L) (NDH-L)
ruditapes_c1768	translation	protein metabolism	P	30S ribosomal protein S17
ruditapes_c21561	protein peptidyl-prolyl isomerization	protein metabolism	P	"Urea amidolyase (Pyrimidine-degrading protein 13,15) (Uracil catabolism protein 3,5) [Includes: Urea carboxylase (EC 6.3.4.6); Allophanate hydrolase (EC 3.5.1.54)]"
ruditapes_c21561	arginine metabolic process	other metabolic processes	P	"Urea amidolyase (Pyrimidine-degrading protein 13,15) (Uracil catabolism protein 3,5) [Includes: Urea carboxylase (EC 6.3.4.6); Allophanate hydrolase (EC 3.5.1.54)]"
ruditapes_c21561	protein folding	protein metabolism	P	"Urea amidolyase (Pyrimidine-degrading protein 13,15) (Uracil catabolism protein 3,5) [Includes: Urea carboxylase (EC 6.3.4.6); Allophanate hydrolase (EC 3.5.1.54)]"
ruditapes_c21561	metabolic process	other metabolic processes	P	"Urea amidolyase (Pyrimidine-degrading protein 13,15) (Uracil catabolism protein 3,5) [Includes: Urea carboxylase (EC 6.3.4.6); Allophanate hydrolase (EC 3.5.1.54)]"
ruditapes_lrc28589	DNA replication	DNA metabolism	P	Large T antigen (LT) (LT-AG) (EC 3.6.4.-)
ruditapes_lrc28589	interspecies interaction between organisms	other biological processes	P	Large T antigen (LT) (LT-AG) (EC 3.6.4.-)
ruditapes_lrc28589	evasion by virus of host immune response	stress response	P	Large T antigen (LT) (LT-AG) (EC 3.6.4.-)
ruditapes_c27349	ATP biosynthetic process	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c27349	ion transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c27349	transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c27349	ATP synthesis coupled proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c27349	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c27349	proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c10597	translation	protein metabolism	P	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase)
ruditapes_c10597	selenocysteine incorporation	protein metabolism	P	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase)
ruditapes_c17480	oxidation reduction	other metabolic processes	P	Probable glycine dehydrogenase [decarboxylating] subunit 1 (EC 1.4.4.2) (Glycine cleavage system P-protein subunit 1) (Glycine decarboxylase subunit 1)
ruditapes_c19927	NAD biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes_c19927	biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes_c19927	pyridine nucleotide biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes2_c135	regulation of cell shape	cell organization and biogenesis	P	Monofunctional glycosyltransferase (MGT) (EC 2.4.-.-) (Peptidoglycan TGase)
ruditapes2_c135	peptidoglycan biosynthetic process	other metabolic processes	P	Monofunctional glycosyltransferase (MGT) (EC 2.4.-.-) (Peptidoglycan TGase)
ruditapes2_c135	cell wall organization	cell organization and biogenesis	P	Monofunctional glycosyltransferase (MGT) (EC 2.4.-.-) (Peptidoglycan TGase)
ruditapes_lrc11317	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc35083	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_c13392	carbohydrate metabolic process	other metabolic processes	P	"Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Xylan 1,4-beta-xylosidase/Alpha-N-arabinofuranosidase 1) (MsXyl1) [Includes: Beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase); Alpha-N-arabinofuranosidase (EC 3.2.1.55) (Alpha-L-arabinofuranosidase) (Arabinosidase)] (Fragment)"
ruditapes_c13392	xylan catabolic process	other metabolic processes	P	"Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Xylan 1,4-beta-xylosidase/Alpha-N-arabinofuranosidase 1) (MsXyl1) [Includes: Beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase); Alpha-N-arabinofuranosidase (EC 3.2.1.55) (Alpha-L-arabinofuranosidase) (Arabinosidase)] (Fragment)"
ruditapes_c13392	metabolic process	other metabolic processes	P	"Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Xylan 1,4-beta-xylosidase/Alpha-N-arabinofuranosidase 1) (MsXyl1) [Includes: Beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase); Alpha-N-arabinofuranosidase (EC 3.2.1.55) (Alpha-L-arabinofuranosidase) (Arabinosidase)] (Fragment)"
ruditapes_c29752	glutamine metabolic process	other metabolic processes	P	Glutamine amidotransferase subunit PdxT (EC 2.6.-.-) (Glutamine amidotransferase glutaminase subunit PdxT)
ruditapes_c24825	metabolic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_c24825	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_c24825	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_lrc33148	carbohydrate metabolic process	other metabolic processes	P	Phosphoglucosamine mutase (EC 5.4.2.10)
ruditapes_c10929	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c10929	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c10929	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c10929	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c10929	metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c10929	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c10929	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c10929	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c25936	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-dehydroquinate synthase (EC 4.2.3.4)
ruditapes_c25936	cellular amino acid biosynthetic process	other metabolic processes	P	3-dehydroquinate synthase (EC 4.2.3.4)
ruditapes_s33743	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_s33743	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_c11255	metabolic process	other metabolic processes	P	Methyltransferase-like protein 13 (EC 2.1.1.-)
ruditapes_c11255	methylation	other metabolic processes	P	Methyltransferase-like protein 13 (EC 2.1.1.-)
ruditapes_c8672	otolith development	developmental processes	P	Otolin-1-A (zOtolin1)
ruditapes_c11796	thiamin biosynthetic process	other metabolic processes	P	Thiamine-phosphate synthase (TP synthase) (TPS) (EC 2.5.1.3) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
ruditapes_s38870	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_s38870	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes2_c1637	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes2_c1637	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes2_c1637	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes2_c1637	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes2_c1637	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c23228	quorum sensing	other biological processes	P	S-ribosylhomocysteine lyase (EC 4.4.1.21) (AI-2 synthesis protein) (Autoinducer-2 production protein LuxS)
ruditapes_c23228	metabolic process	other metabolic processes	P	S-ribosylhomocysteine lyase (EC 4.4.1.21) (AI-2 synthesis protein) (Autoinducer-2 production protein LuxS)
ruditapes_lrc10275	tRNA processing	RNA metabolism	P	Ribonuclease P protein component 2 (RNase P component 2) (EC 3.1.26.5)
ruditapes_c3490	thiamin biosynthetic process	other metabolic processes	P	Probable tRNA sulfurtransferase (EC 2.8.1.4) (Sulfur carrier protein ThiS sulfurtransferase) (Thiamine biosynthesis protein ThiI) (tRNA 4-thiouridine synthase)
ruditapes_c31312	translation	protein metabolism	P	50S ribosomal protein L22P
ruditapes_c31309	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c31309	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c31309	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c31309	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c13391	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c13391	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c13391	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c13391	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c13391	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c7730	riboflavin biosynthetic process	other metabolic processes	P	"6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (EC 2.5.1.78)"
ruditapes_c20885	translation	protein metabolism	P	30S ribosomal protein S18 1
ruditapes_c26952	porphyrin biosynthetic process	other metabolic processes	P	Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37)
ruditapes_c24080	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c24080	biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c24080	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c12412	cellular amino acid metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c12412	ornithine metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c12412	cellular amino acid biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c12412	arginine biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c14845	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimM
ruditapes_c14845	rRNA processing	RNA metabolism	P	Ribosome maturation factor RimM
ruditapes_c23367	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c23367	phosphorylation	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c23367	dTDP biosynthetic process	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c17498	arginyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c17498	arginyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c17498	translation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c17498	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c17498	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c31374	metabolic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (GPAT) (EC 2.3.1.15)
ruditapes_c31374	cellular lipid metabolic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (GPAT) (EC 2.3.1.15)
ruditapes_c31374	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (GPAT) (EC 2.3.1.15)
ruditapes_c31793	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c31793	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c7264	translation	protein metabolism	P	30S ribosomal protein S19
ruditapes_c14458	translational termination	protein metabolism	P	Peptide chain release factor 1 (RF-1)
ruditapes_c14458	translational termination	cell organization and biogenesis	P	Peptide chain release factor 1 (RF-1)
ruditapes_c14458	translation	protein metabolism	P	Peptide chain release factor 1 (RF-1)
ruditapes_c12447	translation	protein metabolism	P	50S ribosomal protein L25 (General stress protein CTC)
ruditapes_c15326	protein-heme linkage	protein metabolism	P	Cytochrome c-type biogenesis protein CcmE (Cytochrome c maturation protein E) (Heme chaperone CcmE)
ruditapes_c15326	cytochrome complex assembly	cell organization and biogenesis	P	Cytochrome c-type biogenesis protein CcmE (Cytochrome c maturation protein E) (Heme chaperone CcmE)
ruditapes_c3921	mitotic cell cycle checkpoint	cell cycle and proliferation	P	Protein zwilch homolog
ruditapes_c3921	mitosis	cell cycle and proliferation	P	Protein zwilch homolog
ruditapes_c3921	mitosis	cell organization and biogenesis	P	Protein zwilch homolog
ruditapes_c3921	cell division	other biological processes	P	Protein zwilch homolog
ruditapes_c3921	cell cycle	cell cycle and proliferation	P	Protein zwilch homolog
ruditapes_c26174	oxidation reduction	other metabolic processes	P	Inactive hydroxysteroid dehydrogenase-like protein 1
ruditapes_c26174	metabolic process	other metabolic processes	P	Inactive hydroxysteroid dehydrogenase-like protein 1
ruditapes_c11697	oxidation reduction	other metabolic processes	P	Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB)
ruditapes_c11697	protein-chromophore linkage	protein metabolism	P	Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB)
ruditapes_c11697	photosynthesis	other metabolic processes	P	Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB)
ruditapes_c11697	transport	transport	P	Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB)
ruditapes_c11697	electron transport chain	other metabolic processes	P	Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB)
ruditapes_c13536	cellular amino acid biosynthetic process	other metabolic processes	P	Dihydroxy-acid dehydratase (DAD) (EC 4.2.1.9)
ruditapes_c13536	metabolic process	other metabolic processes	P	Dihydroxy-acid dehydratase (DAD) (EC 4.2.1.9)
ruditapes_c13536	branched chain family amino acid biosynthetic process	other metabolic processes	P	Dihydroxy-acid dehydratase (DAD) (EC 4.2.1.9)
ruditapes2_c2993	translation	protein metabolism	P	Elongation factor P (EF-P)
ruditapes2_c2993	translational elongation	protein metabolism	P	Elongation factor P (EF-P)
ruditapes2_c2993	peptide biosynthetic process	other metabolic processes	P	Elongation factor P (EF-P)
ruditapes_c21056	respiratory electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c21056	transport	transport	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c21056	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c21056	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_s37723	cell adhesion	cell adhesion	P	Collagen alpha-5(VI) chain (Collagen alpha-1(XXIX) chain)
ruditapes_c28788	cell adhesion	cell adhesion	P	Collagen alpha-5(VI) chain (Collagen alpha-1(XXIX) chain)
ruditapes_s37429	cell adhesion	cell adhesion	P	Collagen alpha-5(VI) chain (Collagen alpha-1(XXIX) chain)
ruditapes_c15727	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta)
ruditapes_c18458	biological_process	other biological processes	P	NACHT and WD repeat domain-containing protein 1
ruditapes_c31618	biological_process	other biological processes	P	T-complex-associated testis-expressed protein 1 (Tcte-1)
ruditapes_c24116	one-carbon compound metabolic process	other metabolic processes	P	"Folylpolyglutamate synthase, mitochondrial (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS) (Tetrahydrofolate synthase) (Tetrahydrofolylpolyglutamate synthase)"
ruditapes_c24116	biosynthetic process	other metabolic processes	P	"Folylpolyglutamate synthase, mitochondrial (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS) (Tetrahydrofolate synthase) (Tetrahydrofolylpolyglutamate synthase)"
ruditapes_c24116	tetrahydrofolylpolyglutamate biosynthetic process	other metabolic processes	P	"Folylpolyglutamate synthase, mitochondrial (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS) (Tetrahydrofolate synthase) (Tetrahydrofolylpolyglutamate synthase)"
ruditapes_c24116	folic acid and derivative biosynthetic process	other metabolic processes	P	"Folylpolyglutamate synthase, mitochondrial (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS) (Tetrahydrofolate synthase) (Tetrahydrofolylpolyglutamate synthase)"
ruditapes_c27409	mitochondrial proton-transporting ATP synthase complex assembly	cell organization and biogenesis	P	"Transmembrane protein 70, mitochondrial"
ruditapes_c30505	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c30505	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c30505	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c30505	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c30505	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c17831	tRNA wobble uridine modification	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c17831	tRNA processing	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes2_lrc5093	translation	protein metabolism	P	50S ribosomal protein L31 type B
ruditapes_c5471	tRNA 3'-trailer cleavage	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes_c5471	tRNA processing	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes_c483	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes_c483	gluconeogenesis	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes_c22000	RNA modification	RNA metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c22000	biopolymer modification	other metabolic processes	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c22000	peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid	protein metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c3405	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c3405	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c3405	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c3405	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c3405	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c6239	translation	protein metabolism	P	50S ribosomal protein L27
ruditapes_c28325	purine salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c28325	nucleoside metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c28325	xanthine metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c28325	purine ribonucleoside salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c12504	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c12504	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c12504	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c7164	barrier septum formation	cell organization and biogenesis	P	Probable septum site-determining protein MinC
ruditapes_c7164	cell morphogenesis	cell organization and biogenesis	P	Probable septum site-determining protein MinC
ruditapes_c7164	regulation of cell cycle	cell cycle and proliferation	P	Probable septum site-determining protein MinC
ruditapes_c7164	cell division	other biological processes	P	Probable septum site-determining protein MinC
ruditapes_c7164	cell cycle	cell cycle and proliferation	P	Probable septum site-determining protein MinC
ruditapes2_c1052	peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid	protein metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes2_c1052	biopolymer modification	other metabolic processes	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes2_c1052	RNA modification	RNA metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c18081	DNA metabolic process	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c18081	DNA recombination	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c18081	SOS response	stress response	P	Protein RecA (Recombinase A)
ruditapes_c18081	DNA repair	stress response	P	Protein RecA (Recombinase A)
ruditapes_c18081	DNA repair	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c18081	response to DNA damage stimulus	stress response	P	Protein RecA (Recombinase A)
ruditapes_c8059	DNA repair	stress response	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_c8059	DNA repair	DNA metabolism	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_c8059	response to DNA damage stimulus	stress response	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_c18009	carbohydrate metabolic process	other metabolic processes	P	Phosphoglucosamine mutase (EC 5.4.2.10)
ruditapes_c24524	diaminopimelate biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes_c24524	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes_c24524	lysine biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes_c24524	cellular amino acid biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes_c12601	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c12601	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c12601	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c3392	double-strand break repair via homologous recombination	stress response	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_c3392	double-strand break repair via homologous recombination	DNA metabolism	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_c3392	DNA repair	stress response	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_c3392	DNA repair	DNA metabolism	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_c3392	response to DNA damage stimulus	stress response	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_c20714	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c20714	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c20714	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c20714	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c29742	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c29742	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c29742	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c29742	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c29404	purine salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c29404	xanthine metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c29404	purine ribonucleoside salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c29404	nucleoside metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c23680	antibiotic catabolic process	other metabolic processes	P	Virginiamycin B lyase (EC 4.2.99.-) (Streptogramin B lyase)
ruditapes_c23680	response to antibiotic	other biological processes	P	Virginiamycin B lyase (EC 4.2.99.-) (Streptogramin B lyase)
ruditapes_c18088	translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c18088	tRNA aminoacylation for protein translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c18088	tRNA aminoacylation for protein translation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c18088	tyrosyl-tRNA aminoacylation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c18088	tyrosyl-tRNA aminoacylation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c25248	translation	protein metabolism	P	30S ribosomal protein S18
ruditapes2_c1595	proteolysis	protein metabolism	P	Venom prothrombin activator vestarin-D1 (vPA) (EC 3.4.21.6) (Venom coagulation factor Xa-like protease) [Cleaved into: Vestarin-D1 light chain; Vestarin-D1 heavy chain]
ruditapes2_c1595	blood coagulation	stress response	P	Venom prothrombin activator vestarin-D1 (vPA) (EC 3.4.21.6) (Venom coagulation factor Xa-like protease) [Cleaved into: Vestarin-D1 light chain; Vestarin-D1 heavy chain]
ruditapes_c14049	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_c21484	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c21484	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_s39673	proton transport	transport	P	Chloroplast envelope membrane protein
ruditapes_s39673	ion transport	transport	P	Chloroplast envelope membrane protein
ruditapes_s39673	transport	transport	P	Chloroplast envelope membrane protein
ruditapes_c1918	translation	protein metabolism	P	"Elongation factor Ts, chloroplastic (EF-Ts)"
ruditapes_c1918	translational elongation	protein metabolism	P	"Elongation factor Ts, chloroplastic (EF-Ts)"
ruditapes_c10342	translation	protein metabolism	P	"30S ribosomal protein S7, chloroplastic"
ruditapes_c25036	cilium assembly	cell organization and biogenesis	P	WD repeat-containing protein 35 (Naofen)
ruditapes_c25036	cell projection organization	cell organization and biogenesis	P	WD repeat-containing protein 35 (Naofen)
ruditapes_c25198	small GTPase mediated signal transduction	signal transduction	P	RAS guanyl-releasing protein 2 (Calcium and DAG-regulated guanine nucleotide exchange factor I) (CalDAG-GEFI)
ruditapes_c25198	regulation of small GTPase mediated signal transduction	signal transduction	P	RAS guanyl-releasing protein 2 (Calcium and DAG-regulated guanine nucleotide exchange factor I) (CalDAG-GEFI)
ruditapes_c25089	spermatogenesis	other biological processes	P	Tudor domain-containing protein 7A
ruditapes_c25089	lens morphogenesis in camera-type eye	developmental processes	P	Tudor domain-containing protein 7A
ruditapes_c25089	cell differentiation	other biological processes	P	Tudor domain-containing protein 7A
ruditapes_c25089	P granule organization	developmental processes	P	Tudor domain-containing protein 7A
ruditapes_c25089	P granule organization	cell organization and biogenesis	P	Tudor domain-containing protein 7A
ruditapes_c25089	lens fiber cell differentiation	developmental processes	P	Tudor domain-containing protein 7A
ruditapes_c25089	posttranscriptional regulation of gene expression	other metabolic processes	P	Tudor domain-containing protein 7A
ruditapes_c22582	central nervous system development	developmental processes	P	Hairy and enhancer of split-related protein HELT (HES/HEY-like transcription factor)
ruditapes_c22582	multicellular organism growth	other biological processes	P	Hairy and enhancer of split-related protein HELT (HES/HEY-like transcription factor)
ruditapes_c22582	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Hairy and enhancer of split-related protein HELT (HES/HEY-like transcription factor)
ruditapes_c22582	multicellular organismal aging	developmental processes	P	Hairy and enhancer of split-related protein HELT (HES/HEY-like transcription factor)
ruditapes_c22582	"transcription, DNA-dependent"	RNA metabolism	P	Hairy and enhancer of split-related protein HELT (HES/HEY-like transcription factor)
ruditapes_c22582	suckling behavior	other biological processes	P	Hairy and enhancer of split-related protein HELT (HES/HEY-like transcription factor)
ruditapes_c22582	gene expression	other metabolic processes	P	Hairy and enhancer of split-related protein HELT (HES/HEY-like transcription factor)
ruditapes_c22582	neuron differentiation	developmental processes	P	Hairy and enhancer of split-related protein HELT (HES/HEY-like transcription factor)
ruditapes_c22582	GABAergic neuron differentiation in the basal ganglia	developmental processes	P	Hairy and enhancer of split-related protein HELT (HES/HEY-like transcription factor)
ruditapes_c22582	post-embryonic development	developmental processes	P	Hairy and enhancer of split-related protein HELT (HES/HEY-like transcription factor)
ruditapes_c22582	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Hairy and enhancer of split-related protein HELT (HES/HEY-like transcription factor)
ruditapes_c26679	glutathione biosynthetic process	other metabolic processes	P	Putative gamma-glutamyltranspeptidase 3 (GGT 3) (EC 2.3.2.2) (Gamma-glutamyltransferase 3) (Glutathione hydrolase 3) (EC 3.4.19.13) [Cleaved into: Putative gamma-glutamyltranspeptidase 3 heavy chain; Putative gamma-glutamyltranspeptidase 3 light chain]
ruditapes_c26679	glutathione metabolic process	other metabolic processes	P	Putative gamma-glutamyltranspeptidase 3 (GGT 3) (EC 2.3.2.2) (Gamma-glutamyltransferase 3) (Glutathione hydrolase 3) (EC 3.4.19.13) [Cleaved into: Putative gamma-glutamyltranspeptidase 3 heavy chain; Putative gamma-glutamyltranspeptidase 3 light chain]
ruditapes_c12426	leukotriene biosynthetic process	other metabolic processes	P	Putative gamma-glutamyltranspeptidase 3 (GGT 3) (EC 2.3.2.2) (Gamma-glutamyltransferase 3) (Glutathione hydrolase 3) (EC 3.4.19.13) [Cleaved into: Putative gamma-glutamyltranspeptidase 3 heavy chain; Putative gamma-glutamyltranspeptidase 3 light chain]
ruditapes_c26679	leukotriene biosynthetic process	other metabolic processes	P	Putative gamma-glutamyltranspeptidase 3 (GGT 3) (EC 2.3.2.2) (Gamma-glutamyltransferase 3) (Glutathione hydrolase 3) (EC 3.4.19.13) [Cleaved into: Putative gamma-glutamyltranspeptidase 3 heavy chain; Putative gamma-glutamyltranspeptidase 3 light chain]
ruditapes_c12426	glutathione biosynthetic process	other metabolic processes	P	Putative gamma-glutamyltranspeptidase 3 (GGT 3) (EC 2.3.2.2) (Gamma-glutamyltransferase 3) (Glutathione hydrolase 3) (EC 3.4.19.13) [Cleaved into: Putative gamma-glutamyltranspeptidase 3 heavy chain; Putative gamma-glutamyltranspeptidase 3 light chain]
ruditapes_c12426	glutathione metabolic process	other metabolic processes	P	Putative gamma-glutamyltranspeptidase 3 (GGT 3) (EC 2.3.2.2) (Gamma-glutamyltransferase 3) (Glutathione hydrolase 3) (EC 3.4.19.13) [Cleaved into: Putative gamma-glutamyltranspeptidase 3 heavy chain; Putative gamma-glutamyltranspeptidase 3 light chain]
ruditapes2_c5967	chromosome organization	cell organization and biogenesis	P	Structural maintenance of chromosomes flexible hinge domain-containing protein 1 (SMC hinge domain-containing protein 1)
ruditapes2_c5967	"dosage compensation, by inactivation of X chromosome"	other metabolic processes	P	Structural maintenance of chromosomes flexible hinge domain-containing protein 1 (SMC hinge domain-containing protein 1)
ruditapes_lrc11545	microtubule-based movement	other biological processes	P	Putative tubulin beta chain-like protein ENSP00000290377
ruditapes_lrc11545	GTP catabolic process	other metabolic processes	P	Putative tubulin beta chain-like protein ENSP00000290377
ruditapes_lrc11545	microtubule-based process	other biological processes	P	Putative tubulin beta chain-like protein ENSP00000290377
ruditapes_lrc11545	protein polymerization	cell organization and biogenesis	P	Putative tubulin beta chain-like protein ENSP00000290377
ruditapes_c24649	translation	protein metabolism	P	Eukaryotic translation initiation factor 4E type 1B
ruditapes_c24649	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 4E type 1B
ruditapes_c24649	regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4E type 1B
ruditapes_c18973	cell adhesion	cell adhesion	P	Collagen alpha-6(VI) chain
ruditapes_c27542	signal transduction	signal transduction	P	RIIa domain-containing protein 1
ruditapes_c17297	oxidation reduction	other metabolic processes	P	Cannabidiolic acid synthase-like 2
ruditapes_c4854	cellular amino acid biosynthetic process	other metabolic processes	P	Diaminopimelate epimerase (DAP epimerase) (EC 5.1.1.7)
ruditapes_c4854	lysine biosynthetic process	other metabolic processes	P	Diaminopimelate epimerase (DAP epimerase) (EC 5.1.1.7)
ruditapes_c4854	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	Diaminopimelate epimerase (DAP epimerase) (EC 5.1.1.7)
ruditapes_c6016	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_lrc21604	methylation	other metabolic processes	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes_lrc21604	tRNA processing	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes_lrc21604	RNA processing	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes_lrc21604	RNA methylation	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes_c20481	tRNA wobble uridine modification	RNA metabolism	P	tRNA (mo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c20481	methylation	other metabolic processes	P	tRNA (mo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c29140	nitrate assimilation	other metabolic processes	P	Periplasmic nitrate reductase (EC 1.7.99.4)
ruditapes_c29140	transport	transport	P	Periplasmic nitrate reductase (EC 1.7.99.4)
ruditapes_c29140	oxidation reduction	other metabolic processes	P	Periplasmic nitrate reductase (EC 1.7.99.4)
ruditapes_c29140	electron transport chain	other metabolic processes	P	Periplasmic nitrate reductase (EC 1.7.99.4)
ruditapes_c27414	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c27414	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c24954	translation	protein metabolism	P	50S ribosomal protein L31
ruditapes_c311	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c311	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c311	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c311	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c13369	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c13369	translation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c13369	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c13369	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c13369	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c13369	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c19454	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
ruditapes_c19454	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
ruditapes2_c2052	biotin biosynthetic process	other metabolic processes	P	ATP-dependent dethiobiotin synthetase BioD (EC 6.3.3.3) (DTB synthetase) (DTBS) (Dethiobiotin synthase)
ruditapes_c13283	transport	transport	P	Sodium/proline symporter (Proline permease)
ruditapes_c13283	transmembrane transport	transport	P	Sodium/proline symporter (Proline permease)
ruditapes_c13283	sodium ion transport	transport	P	Sodium/proline symporter (Proline permease)
ruditapes_c13283	proline transport	transport	P	Sodium/proline symporter (Proline permease)
ruditapes_c13283	amino acid transport	transport	P	Sodium/proline symporter (Proline permease)
ruditapes_c13283	ion transport	transport	P	Sodium/proline symporter (Proline permease)
ruditapes2_c4556	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc35762	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes2_c3765	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc32215	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc35416	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes2_c4038	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_c9013	neurotransmitter transport	transport	P	Vesicular glutamate transporter 2 (VGluT2) (Solute carrier family 17 member 6)
ruditapes_c9013	transmembrane transport	transport	P	Vesicular glutamate transporter 2 (VGluT2) (Solute carrier family 17 member 6)
ruditapes_c9013	transport	transport	P	Vesicular glutamate transporter 2 (VGluT2) (Solute carrier family 17 member 6)
ruditapes_c9013	ion transport	transport	P	Vesicular glutamate transporter 2 (VGluT2) (Solute carrier family 17 member 6)
ruditapes_c9013	sodium ion transport	transport	P	Vesicular glutamate transporter 2 (VGluT2) (Solute carrier family 17 member 6)
ruditapes_c28438	metabolic process	other metabolic processes	P	"5-aminolevulinate synthase, nonspecific, mitochondrial (ALAS-H) (EC 2.3.1.37) (5-aminolevulinic acid synthase 1) (Delta-ALA synthase 1) (Delta-aminolevulinate synthase 1)"
ruditapes_c28438	biosynthetic process	other metabolic processes	P	"5-aminolevulinate synthase, nonspecific, mitochondrial (ALAS-H) (EC 2.3.1.37) (5-aminolevulinic acid synthase 1) (Delta-ALA synthase 1) (Delta-aminolevulinate synthase 1)"
ruditapes_c28438	porphyrin metabolic process	other metabolic processes	P	"5-aminolevulinate synthase, nonspecific, mitochondrial (ALAS-H) (EC 2.3.1.37) (5-aminolevulinic acid synthase 1) (Delta-ALA synthase 1) (Delta-aminolevulinate synthase 1)"
ruditapes_c28438	heme biosynthetic process	other metabolic processes	P	"5-aminolevulinate synthase, nonspecific, mitochondrial (ALAS-H) (EC 2.3.1.37) (5-aminolevulinic acid synthase 1) (Delta-ALA synthase 1) (Delta-aminolevulinate synthase 1)"
ruditapes_c28438	tetrapyrrole biosynthetic process	other metabolic processes	P	"5-aminolevulinate synthase, nonspecific, mitochondrial (ALAS-H) (EC 2.3.1.37) (5-aminolevulinic acid synthase 1) (Delta-ALA synthase 1) (Delta-aminolevulinate synthase 1)"
ruditapes_c25644	neuropeptide signaling pathway	signal transduction	P	Probable G-protein coupled receptor 133
ruditapes_c25644	cell surface receptor linked signal transduction	signal transduction	P	Probable G-protein coupled receptor 133
ruditapes_c25644	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 133
ruditapes_c22248	DNA replication	DNA metabolism	P	Origin recognition complex subunit 2
ruditapes_c7261	inner ear morphogenesis	developmental processes	P	Active breakpoint cluster region-related protein
ruditapes_c7261	negative regulation of cell migration	other biological processes	P	Active breakpoint cluster region-related protein
ruditapes_c7261	brain development	developmental processes	P	Active breakpoint cluster region-related protein
ruditapes_c7261	regulation of Rho protein signal transduction	signal transduction	P	Active breakpoint cluster region-related protein
ruditapes_c7261	signal transduction	signal transduction	P	Active breakpoint cluster region-related protein
ruditapes_c7261	neuromuscular process controlling balance	other biological processes	P	Active breakpoint cluster region-related protein
ruditapes_c7261	positive regulation of phagocytosis	cell organization and biogenesis	P	Active breakpoint cluster region-related protein
ruditapes_c7261	response to lipopolysaccharide	other biological processes	P	Active breakpoint cluster region-related protein
ruditapes_c7261	negative regulation of neutrophil degranulation	transport	P	Active breakpoint cluster region-related protein
ruditapes_c7261	positive regulation of Rac GTPase activity	signal transduction	P	Active breakpoint cluster region-related protein
ruditapes_c7261	negative regulation of inflammatory response	stress response	P	Active breakpoint cluster region-related protein
ruditapes_c7261	actin cytoskeleton organization	cell organization and biogenesis	P	Active breakpoint cluster region-related protein
ruditapes_c7261	positive regulation of phagocytosis	transport	P	Active breakpoint cluster region-related protein
ruditapes_c24913	keratinization	developmental processes	P	Protein-glutamine gamma-glutamyltransferase E (EC 2.3.2.13) (Transglutaminase E) (TG(E)) (TGE) (TGase E) (Transglutaminase-3) (TGase-3) [Cleaved into: Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain; Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain]
ruditapes_c24913	peptide cross-linking	protein metabolism	P	Protein-glutamine gamma-glutamyltransferase E (EC 2.3.2.13) (Transglutaminase E) (TG(E)) (TGE) (TGase E) (Transglutaminase-3) (TGase-3) [Cleaved into: Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain; Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain]
ruditapes_c8381	"phagocytosis, recognition"	transport	P	Collectin-12 (Collectin placenta protein 1) (CL-P1)
ruditapes_c8381	"phagocytosis, recognition"	cell organization and biogenesis	P	Collectin-12 (Collectin placenta protein 1) (CL-P1)
ruditapes_c8381	pattern recognition receptor signaling pathway	signal transduction	P	Collectin-12 (Collectin placenta protein 1) (CL-P1)
ruditapes_c8381	pattern recognition receptor signaling pathway	stress response	P	Collectin-12 (Collectin placenta protein 1) (CL-P1)
ruditapes_c8381	immune response	other biological processes	P	Collectin-12 (Collectin placenta protein 1) (CL-P1)
ruditapes_c23745	transport	transport	P	Probable UDP-sugar transporter protein SLC35A5 (Solute carrier family 35 member A5)
ruditapes_c23745	nucleotide-sugar transport	transport	P	Probable UDP-sugar transporter protein SLC35A5 (Solute carrier family 35 member A5)
ruditapes_c23745	carbohydrate transport	transport	P	Probable UDP-sugar transporter protein SLC35A5 (Solute carrier family 35 member A5)
ruditapes_c16004	proteolysis	protein metabolism	P	Endoplasmic reticulum aminopeptidase 2 (EC 3.4.11.-)
ruditapes_c469	protein amino acid glycosylation	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18)
ruditapes_c469	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18)
ruditapes_c30119	rRNA processing	RNA metabolism	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (EC 5.2.1.8) (Parvulin-14) (Par14) (Peptidyl-prolyl cis-trans isomerase Pin4) (PPIase Pin4) (Rotamase Pin4)
ruditapes_c30119	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (EC 5.2.1.8) (Parvulin-14) (Par14) (Peptidyl-prolyl cis-trans isomerase Pin4) (PPIase Pin4) (Rotamase Pin4)
ruditapes_c30119	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (EC 5.2.1.8) (Parvulin-14) (Par14) (Peptidyl-prolyl cis-trans isomerase Pin4) (PPIase Pin4) (Rotamase Pin4)
ruditapes_c10955	histone H3 acetylation	protein metabolism	P	DNA polymerase epsilon subunit 4 (EC 2.7.7.7) (DNA polymerase II subunit 4)
ruditapes_c10955	histone H3 acetylation	cell organization and biogenesis	P	DNA polymerase epsilon subunit 4 (EC 2.7.7.7) (DNA polymerase II subunit 4)
ruditapes_c17924	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase FKBP6 (PPIase FKBP6) (EC 5.2.1.8) (FK506-binding protein 6) (FKBP-6) (Rotamase)
ruditapes_c17924	peptidyl-proline modification	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase FKBP6 (PPIase FKBP6) (EC 5.2.1.8) (FK506-binding protein 6) (FKBP-6) (Rotamase)
ruditapes_c17924	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase FKBP6 (PPIase FKBP6) (EC 5.2.1.8) (FK506-binding protein 6) (FKBP-6) (Rotamase)
ruditapes_c23030	oxidation reduction	other metabolic processes	P	Quinone oxidoreductase-like protein 2 (EC 1.-.-.-)
ruditapes_c26285	protein localization at cell surface	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.4.19.12) (Deubiquitinating enzyme 4) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4)
ruditapes_c26285	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.4.19.12) (Deubiquitinating enzyme 4) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4)
ruditapes_c26285	regulation of protein stability	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.4.19.12) (Deubiquitinating enzyme 4) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4)
ruditapes_c26285	protein deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.4.19.12) (Deubiquitinating enzyme 4) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4)
ruditapes_c26285	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.4.19.12) (Deubiquitinating enzyme 4) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4)
ruditapes_c26285	negative regulation of protein ubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.4.19.12) (Deubiquitinating enzyme 4) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4)
ruditapes2_c2485	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes2_c2485	protein transport	transport	P	Autophagy-related protein 2
ruditapes2_c2485	transport	transport	P	Autophagy-related protein 2
ruditapes2_lrc7307	cellular amino acid biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes2_lrc7307	phosphorylation	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes2_lrc7307	threonine biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes_c18946	glutathione biosynthetic process	other metabolic processes	P	Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-ECS) (GCS) (Gamma-glutamylcysteine synthetase)
ruditapes2_c2668	transport	transport	P	Probable potassium transport system protein kup
ruditapes2_c2668	potassium ion transport	transport	P	Probable potassium transport system protein kup
ruditapes2_c2668	ion transport	transport	P	Probable potassium transport system protein kup
ruditapes_c3079	porphyrin biosynthetic process	other metabolic processes	P	Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37)
ruditapes_c27669	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c27669	rRNA methylation	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c27669	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_lrc38437	metabolic process	other metabolic processes	P	Non-specific ribonucleoside hydrolase RihC (EC 3.2.-.-) (Purine/pyrimidine ribonucleoside hydrolase)
ruditapes_c26160	lipoate biosynthetic process	other metabolic processes	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes_c26160	protein modification process	protein metabolism	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes2_c2765	metabolic process	other metabolic processes	P	UPF0207 protein KPN78578
ruditapes2_c5567	phosphonate catabolic process	other metabolic processes	P	Phosphonoacetaldehyde hydrolase (Phosphonatase) (EC 3.11.1.1) (Phosphonoacetaldehyde phosphonohydrolase)
ruditapes_s38339	phosphonate catabolic process	other metabolic processes	P	Phosphonoacetaldehyde hydrolase (Phosphonatase) (EC 3.11.1.1) (Phosphonoacetaldehyde phosphonohydrolase)
ruditapes2_c5033	phosphonate catabolic process	other metabolic processes	P	Phosphonoacetaldehyde hydrolase (Phosphonatase) (EC 3.11.1.1) (Phosphonoacetaldehyde phosphonohydrolase)
ruditapes_c30829	methylation	other metabolic processes	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes_c30829	RNA methylation	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes_c30829	tRNA processing	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes_c30829	RNA processing	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes2_lrc7114	inositol catabolic process	other metabolic processes	P	Inosose dehydratase (EC 4.2.1.44) (2-keto-myo-inositol dehydratase) (2KMI dehydratase)
ruditapes_c18982	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18982	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18982	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18982	ATP metabolic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18982	ion transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18982	proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18982	transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18982	ATP hydrolysis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c2075	metabolic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisF (EC 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit HisF) (ImGP synthase subunit HisF) (IGPS subunit HisF)
ruditapes_c2075	histidine biosynthetic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisF (EC 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit HisF) (ImGP synthase subunit HisF) (IGPS subunit HisF)
ruditapes_c2075	cellular amino acid biosynthetic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisF (EC 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit HisF) (ImGP synthase subunit HisF) (IGPS subunit HisF)
ruditapes_c25260	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes_c25260	gluconeogenesis	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes_c28504	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c28504	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c28504	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c22313	translation	protein metabolism	P	30S ribosomal protein S17
ruditapes_c5178	proteolysis	protein metabolism	P	Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase)
ruditapes_c5178	protein metabolic process	protein metabolism	P	Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase)
ruditapes_c12897	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes_c12897	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes_c12897	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes_c19414	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_c28450	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_c7375	biopolymer modification	other metabolic processes	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c7375	tRNA processing	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c7375	RNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c7375	tRNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes2_c52	DNA replication	DNA metabolism	P	Error-prone DNA polymerase (EC 2.7.7.7)
ruditapes2_c52	response to DNA damage stimulus	stress response	P	Error-prone DNA polymerase (EC 2.7.7.7)
ruditapes2_c52	DNA repair	stress response	P	Error-prone DNA polymerase (EC 2.7.7.7)
ruditapes2_c52	DNA repair	DNA metabolism	P	Error-prone DNA polymerase (EC 2.7.7.7)
ruditapes_c24930	DNA repair	stress response	P	Recombination protein RecR
ruditapes_c24930	DNA repair	DNA metabolism	P	Recombination protein RecR
ruditapes_c24930	response to DNA damage stimulus	stress response	P	Recombination protein RecR
ruditapes_c24930	DNA recombination	DNA metabolism	P	Recombination protein RecR
ruditapes_c13921	metabolic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c13921	cellular amino acid biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c13921	tryptophan biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c13921	aromatic amino acid family biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c30949	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c30949	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c30949	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c30949	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c30949	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c17583	one-carbon compound metabolic process	other metabolic processes	P	Tetrahydromethanopterin S-methyltransferase subunit H (EC 2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit H)
ruditapes_c17583	pteridine and derivative metabolic process	other metabolic processes	P	Tetrahydromethanopterin S-methyltransferase subunit H (EC 2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit H)
ruditapes_c17583	cellular metabolic process	other metabolic processes	P	Tetrahydromethanopterin S-methyltransferase subunit H (EC 2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit H)
ruditapes_c17583	methylation	other metabolic processes	P	Tetrahydromethanopterin S-methyltransferase subunit H (EC 2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit H)
ruditapes_c17583	methanogenesis	other metabolic processes	P	Tetrahydromethanopterin S-methyltransferase subunit H (EC 2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit H)
ruditapes_c31136	biotin biosynthetic process	other metabolic processes	P	ATP-dependent dethiobiotin synthetase BioD (EC 6.3.3.3) (DTB synthetase) (DTBS) (Dethiobiotin synthase)
ruditapes_c23676	biosynthetic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c23676	metabolic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c23676	biotin biosynthetic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes2_c1455	cellular amino acid biosynthetic process	other metabolic processes	P	Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)
ruditapes2_c1455	histidine biosynthetic process	other metabolic processes	P	Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)
ruditapes_c24382	DNA replication	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c24382	metabolic process	other metabolic processes	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c24382	DNA catabolic process	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c25901	translational initiation	protein metabolism	P	Probable translation initiation factor IF-2
ruditapes_c25901	GTP catabolic process	other metabolic processes	P	Probable translation initiation factor IF-2
ruditapes_c25901	translation	protein metabolism	P	Probable translation initiation factor IF-2
ruditapes2_c6175	translational initiation	protein metabolism	P	Translation initiation factor 2 subunit beta (aIF2-beta) (eIF-2-beta)
ruditapes2_c6175	translation	protein metabolism	P	Translation initiation factor 2 subunit beta (aIF2-beta) (eIF-2-beta)
ruditapes_lrc19935	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_lrc19935	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_lrc19935	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_s36895	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_s36895	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c24486	translation	protein metabolism	P	30S ribosomal protein S15/S13e
ruditapes_c6080	tRNA 3'-trailer cleavage	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes_c6080	tRNA processing	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes2_c2411	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2411	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2411	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2411	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2411	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_lrc16947	methylation	other metabolic processes	P	Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (L-isoaspartyl protein carboxyl methyltransferase) (Protein L-isoaspartyl methyltransferase) (Protein-beta-aspartate methyltransferase) (PIMT)
ruditapes_lrc16947	protein modification process	protein metabolism	P	Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (L-isoaspartyl protein carboxyl methyltransferase) (Protein L-isoaspartyl methyltransferase) (Protein-beta-aspartate methyltransferase) (PIMT)
ruditapes_c9622	biosynthetic process	other metabolic processes	P	8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (KAPA synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c9622	metabolic process	other metabolic processes	P	8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (KAPA synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c9622	biotin biosynthetic process	other metabolic processes	P	8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (KAPA synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c24849	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)
ruditapes_c24849	lipid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)
ruditapes_c6406	metabolic process	other metabolic processes	P	Succinylglutamate desuccinylase (EC 3.5.1.96)
ruditapes_c6406	arginine catabolic process to glutamate	other metabolic processes	P	Succinylglutamate desuccinylase (EC 3.5.1.96)
ruditapes_c6406	arginine metabolic process	other metabolic processes	P	Succinylglutamate desuccinylase (EC 3.5.1.96)
ruditapes_c15491	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c15491	RNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c15491	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c15491	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_s38180	translation	protein metabolism	P	50S ribosomal protein L31
ruditapes_c10596	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c10596	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c10596	biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c12446	methylation	other metabolic processes	P	Probable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating] (EC 2.1.1.-)
ruditapes_c12446	protein amino acid methylation	protein metabolism	P	Probable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating] (EC 2.1.1.-)
ruditapes_c12446	cobalamin biosynthetic process	other metabolic processes	P	Probable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating] (EC 2.1.1.-)
ruditapes_c20300	riboflavin biosynthetic process	other metabolic processes	P	2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase (FAPy deformylase) (EC 3.5.1.102) (Formamide hydrolase)
ruditapes_c24879	tRNA processing	RNA metabolism	P	tRNA-guanine(15) transglycosylase (EC 2.4.2.48) (7-cyano-7-deazaguanine tRNA-ribosyltransferase) (Archaeal tRNA-guanine transglycosylase)
ruditapes_c24879	queuosine biosynthetic process	RNA metabolism	P	tRNA-guanine(15) transglycosylase (EC 2.4.2.48) (7-cyano-7-deazaguanine tRNA-ribosyltransferase) (Archaeal tRNA-guanine transglycosylase)
ruditapes_c24879	tRNA modification	RNA metabolism	P	tRNA-guanine(15) transglycosylase (EC 2.4.2.48) (7-cyano-7-deazaguanine tRNA-ribosyltransferase) (Archaeal tRNA-guanine transglycosylase)
ruditapes_c19281	"transcription, DNA-dependent"	RNA metabolism	P	Putative HTH-type transcriptional regulatory protein MmarC7
ruditapes_c19281	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative HTH-type transcriptional regulatory protein MmarC7
ruditapes_c20703	cell cycle	cell cycle and proliferation	P	Cell division protein ZapA (Z ring-associated protein ZapA)
ruditapes_c20703	barrier septum formation	cell organization and biogenesis	P	Cell division protein ZapA (Z ring-associated protein ZapA)
ruditapes_c20703	cell division	other biological processes	P	Cell division protein ZapA (Z ring-associated protein ZapA)
ruditapes_c3713	DNA replication	DNA metabolism	P	Primosomal replication protein n
ruditapes_c3713	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	Primosomal replication protein n
ruditapes_c3713	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	Primosomal replication protein n
ruditapes_c5408	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c5408	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c5408	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c22992	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c22992	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_lrc26269	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_lrc26269	diaminopimelate biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_lrc26269	lysine biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_lrc26269	cellular amino acid biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_c19419	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Cyclic pyranopterin monophosphate synthase (EC 4.1.99.18) (Molybdenum cofactor biosynthesis protein A)
ruditapes_lrc31207	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (Acyl-PO4 G3P acyltransferase) (Acyl-phosphate--glycerol-3-phosphate acyltransferase) (G3P acyltransferase) (GPAT) (EC 2.3.1.n3) (Lysophosphatidic acid synthase) (LPA synthase)
ruditapes_c4652	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes2_c3473	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c4652	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes2_c3473	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c22173	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c22173	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c22173	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c22173	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c5133	cytochrome complex assembly	cell organization and biogenesis	P	Cytochrome c-type biogenesis protein CcmE (Cytochrome c maturation protein E) (Heme chaperone CcmE)
ruditapes_c5133	protein-heme linkage	protein metabolism	P	Cytochrome c-type biogenesis protein CcmE (Cytochrome c maturation protein E) (Heme chaperone CcmE)
ruditapes_c35954	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes_c35954	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes_c35954	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes_c35954	proton transport	transport	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes_c35954	transport	transport	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes_c35954	ion transport	transport	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes2_lrc2787	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes_c20152	rRNA processing	RNA metabolism	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c20152	RNA methylation	RNA metabolism	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c20152	methylation	other metabolic processes	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c20152	RNA processing	RNA metabolism	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c20323	cell division	other biological processes	P	Probable intracellular septation protein A
ruditapes_c20323	barrier septum formation	cell organization and biogenesis	P	Probable intracellular septation protein A
ruditapes_c20323	cell cycle	cell cycle and proliferation	P	Probable intracellular septation protein A
ruditapes_lrc34129	translation	protein metabolism	P	30S ribosomal protein S5
ruditapes_lrc33597	regulation of cell growth	other biological processes	P	Serine protease HTRA1 (EC 3.4.21.-) (High-temperature requirement A serine peptidase 1) (Serine protease 11)
ruditapes_lrc33597	proteolysis	protein metabolism	P	Serine protease HTRA1 (EC 3.4.21.-) (High-temperature requirement A serine peptidase 1) (Serine protease 11)
ruditapes2_c2927	photosynthesis	other metabolic processes	P	Photosystem I assembly protein Ycf4
ruditapes_c6917	translation	protein metabolism	P	"50S ribosomal protein L2, chloroplastic"
ruditapes_c11103	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta N-terminal section (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta N-terminal section) (RNA polymerase subunit beta N-terminal section)
ruditapes2_lrc4880	transport	transport	P	"Fatty acid-binding protein, adipocyte (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes2_lrc6755	transport	transport	P	"Fatty acid-binding protein, adipocyte (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes_lrc34474	transport	transport	P	"Fatty acid-binding protein, adipocyte (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes2_lrc3976	transport	transport	P	"Fatty acid-binding protein, adipocyte (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes2_lrc6063	transport	transport	P	"Fatty acid-binding protein, adipocyte (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes_lrc35528	transport	transport	P	"Fatty acid-binding protein, adipocyte (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes_lrc35628	transport	transport	P	"Fatty acid-binding protein, adipocyte (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes_c35607	transport	transport	P	"Fatty acid-binding protein, adipocyte (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes2_c5716	transport	transport	P	"Fatty acid-binding protein, adipocyte (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes_lrc32741	transport	transport	P	"Fatty acid-binding protein, adipocyte (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes_c30755	biosynthetic process	other metabolic processes	P	Trehalose phosphorylase (EC 2.4.1.231) (Trehalose synthase) (TSase)
ruditapes_c30755	glucose 6-phosphate metabolic process	other metabolic processes	P	Trehalose phosphorylase (EC 2.4.1.231) (Trehalose synthase) (TSase)
ruditapes_c30755	trehalose metabolic process	other metabolic processes	P	Trehalose phosphorylase (EC 2.4.1.231) (Trehalose synthase) (TSase)
ruditapes_c30755	carbohydrate metabolic process	other metabolic processes	P	Trehalose phosphorylase (EC 2.4.1.231) (Trehalose synthase) (TSase)
ruditapes_c30755	glucose metabolic process	other metabolic processes	P	Trehalose phosphorylase (EC 2.4.1.231) (Trehalose synthase) (TSase)
ruditapes_c22948	rRNA processing	RNA metabolism	P	ATP-dependent RNA helicase MAK5 (EC 3.6.4.13) (Maintenance of killer protein 5)
ruditapes_c22948	ribosome biogenesis	other biological processes	P	ATP-dependent RNA helicase MAK5 (EC 3.6.4.13) (Maintenance of killer protein 5)
ruditapes_c2782	lipid biosynthetic process	other metabolic processes	P	"Acetyl-CoA carboxylase, mitochondrial (ACC) (EC 6.4.1.2) [Includes: Biotin carboxylase (EC 6.3.4.14)]"
ruditapes_c2782	metabolic process	other metabolic processes	P	"Acetyl-CoA carboxylase, mitochondrial (ACC) (EC 6.4.1.2) [Includes: Biotin carboxylase (EC 6.3.4.14)]"
ruditapes_c2782	fatty acid biosynthetic process	other metabolic processes	P	"Acetyl-CoA carboxylase, mitochondrial (ACC) (EC 6.4.1.2) [Includes: Biotin carboxylase (EC 6.3.4.14)]"
ruditapes2_lrc5038	RNA splicing	RNA metabolism	P	U1 small nuclear ribonucleoprotein component SNU71
ruditapes2_lrc5038	mRNA processing	RNA metabolism	P	U1 small nuclear ribonucleoprotein component SNU71
ruditapes_c28130	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase KKQ8 (EC 2.7.11.1)
ruditapes_c28130	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase KKQ8 (EC 2.7.11.1)
ruditapes_c29429	glycogen biosynthetic process	other metabolic processes	P	Glycogenin-1 (EC 2.4.1.186) (Glycogen synthesis initiator protein 1) (Glycogenin glucosyltransferase 1)
ruditapes_c12046	biological_process	other biological processes	P	SERTA domain-containing protein 4
ruditapes_c209	translation	protein metabolism	P	ATP-dependent RNA helicase eIF4A (EC 3.6.4.13) (Eukaryotic initiation factor 4A) (eIF-4A) (Translation initiation factor 1)
ruditapes_c209	translational initiation	protein metabolism	P	ATP-dependent RNA helicase eIF4A (EC 3.6.4.13) (Eukaryotic initiation factor 4A) (eIF-4A) (Translation initiation factor 1)
ruditapes_c9851	tRNA processing	RNA metabolism	P	Exportin-T (Exportin(tRNA)) (Karyopherin-beta) (tRNA exportin)
ruditapes_c9851	transport	transport	P	Exportin-T (Exportin(tRNA)) (Karyopherin-beta) (tRNA exportin)
ruditapes_lrc6888	intra-Golgi vesicle-mediated transport	transport	P	Conserved oligomeric Golgi complex subunit 6 (COG complex subunit 6) (Component of oligomeric Golgi complex 6)
ruditapes_lrc6888	protein transport	transport	P	Conserved oligomeric Golgi complex subunit 6 (COG complex subunit 6) (Component of oligomeric Golgi complex 6)
ruditapes_lrc6888	transport	transport	P	Conserved oligomeric Golgi complex subunit 6 (COG complex subunit 6) (Component of oligomeric Golgi complex 6)
ruditapes_c17222	GTP catabolic process	other metabolic processes	P	"Elongation factor G, mitochondrial (EF-Gmt) (Elongation factor G 1, mitochondrial) (mEF-G 1) (Elongation factor G1)"
ruditapes_c17222	translational elongation	protein metabolism	P	"Elongation factor G, mitochondrial (EF-Gmt) (Elongation factor G 1, mitochondrial) (mEF-G 1) (Elongation factor G1)"
ruditapes_c17222	translation	protein metabolism	P	"Elongation factor G, mitochondrial (EF-Gmt) (Elongation factor G 1, mitochondrial) (mEF-G 1) (Elongation factor G1)"
ruditapes_c10174	rRNA processing	RNA metabolism	P	ATP-dependent RNA helicase dbp3 (EC 3.6.4.13)
ruditapes_c10174	ribosome biogenesis	other biological processes	P	ATP-dependent RNA helicase dbp3 (EC 3.6.4.13)
ruditapes_c30100	translation	protein metabolism	P	40S ribosomal protein S0
ruditapes_c14292	proteolysis	protein metabolism	P	Probable zinc metalloprotease SS1G
ruditapes_c16549	ubiquinone biosynthetic process	other metabolic processes	P	"Ubiquinone biosynthesis protein coq4, mitochondrial (Coenzyme Q biosynthesis protein 4)"
ruditapes_c20491	metabolic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c20491	cellular amino acid biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c20491	oxidation reduction	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c20491	phosphorylation	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c20491	aromatic amino acid family biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c8175	phosphorylation	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c8175	glycerol metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c8175	carbohydrate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c8175	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c12804	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
ruditapes_c12804	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
ruditapes_c3092	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c3092	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c3092	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c3092	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c3092	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c3092	cell division	other biological processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c23205	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c23205	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c23205	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_c2725	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c2725	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c2725	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c2725	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c2725	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c10074	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c10074	cellular amino acid biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c26722	biopolymer modification	other metabolic processes	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c26722	tRNA processing	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c26722	tRNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c26722	RNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c24268	DNA recombination	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c24268	DNA repair	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c24268	DNA repair	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c24268	response to DNA damage stimulus	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c24268	SOS response	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes2_c6497	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes2_c3776	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes2_c6497	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes2_c3776	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes2_c6497	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes2_c3776	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes2_c6497	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes2_c3776	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes_lrc36011	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc36011	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc36011	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc36011	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc36011	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc36011	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c23364	thiamin biosynthetic process	other metabolic processes	P	Thiazole synthase (EC 2.8.1.10)
ruditapes_c25408	nucleotide metabolic process	other metabolic processes	P	Phosphopentomutase (EC 5.4.2.7) (Phosphodeoxyribomutase)
ruditapes_c25408	metabolic process	other metabolic processes	P	Phosphopentomutase (EC 5.4.2.7) (Phosphodeoxyribomutase)
ruditapes_c25408	cellular metabolic compound salvage	other metabolic processes	P	Phosphopentomutase (EC 5.4.2.7) (Phosphodeoxyribomutase)
ruditapes_lrc33403	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_lrc33403	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_lrc33403	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_lrc33403	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c17862	oxidation reduction	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c17862	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c21802	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c21802	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c21802	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c21802	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c21802	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_lrc19352	carbohydrate metabolic process	other metabolic processes	P	L-lactate dehydrogenase (L-LDH) (EC 1.1.1.27)
ruditapes_lrc19352	cellular carbohydrate metabolic process	other metabolic processes	P	L-lactate dehydrogenase (L-LDH) (EC 1.1.1.27)
ruditapes_lrc19352	glycolysis	other metabolic processes	P	L-lactate dehydrogenase (L-LDH) (EC 1.1.1.27)
ruditapes_lrc19352	oxidation reduction	other metabolic processes	P	L-lactate dehydrogenase (L-LDH) (EC 1.1.1.27)
ruditapes_c12110	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c12110	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c12110	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c12110	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c13990	cellular amino acid metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c13990	cellular amino acid biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c13990	ornithine metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c13990	arginine biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c16303	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c16303	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c16303	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c16303	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c16303	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes2_lrc6719	purine nucleotide biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] subunit B (EC 6.3.5.2) (GMP synthetase)
ruditapes2_lrc6719	GMP biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] subunit B (EC 6.3.5.2) (GMP synthetase)
ruditapes2_c2572	translation	protein metabolism	P	50S ribosomal protein L16
ruditapes_c11359	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c11359	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c11359	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c26284	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c26284	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c26284	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c26284	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c26284	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c21602	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c21602	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c21602	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c21602	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c21602	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c9336	translation	protein metabolism	P	30S ribosomal protein S2
ruditapes_c24054	protein transport	transport	P	Autophagy-related protein 2
ruditapes_c24054	transport	transport	P	Autophagy-related protein 2
ruditapes_c24054	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes_lrc14456	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes_lrc14456	protein transport	transport	P	Autophagy-related protein 2
ruditapes_lrc14456	transport	transport	P	Autophagy-related protein 2
ruditapes_c25760	ion transport	transport	P	"ATP synthase subunit b, plastid (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes_c25760	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit b, plastid (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes_c25760	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, plastid (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes_c25760	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, plastid (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes_c25760	transport	transport	P	"ATP synthase subunit b, plastid (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes_c25760	proton transport	transport	P	"ATP synthase subunit b, plastid (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes2_c2237	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Docking protein 2 (Downstream of tyrosine kinase 2)
ruditapes2_c2237	Ras protein signal transduction	signal transduction	P	Docking protein 2 (Downstream of tyrosine kinase 2)
ruditapes_c7130	transport	transport	P	Solute carrier family 22 member 1 (Organic cation transporter 1)
ruditapes_c7130	organic cation transport	transport	P	Solute carrier family 22 member 1 (Organic cation transporter 1)
ruditapes_c7130	transmembrane transport	transport	P	Solute carrier family 22 member 1 (Organic cation transporter 1)
ruditapes_c7130	cation transport	transport	P	Solute carrier family 22 member 1 (Organic cation transporter 1)
ruditapes_c7130	transmembrane ion transport	transport	P	Solute carrier family 22 member 1 (Organic cation transporter 1)
ruditapes_c7130	ion transport	transport	P	Solute carrier family 22 member 1 (Organic cation transporter 1)
ruditapes_c11941	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48)
ruditapes_c11941	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48)
ruditapes_c11941	cell adhesion	cell adhesion	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48)
ruditapes_c14318	smoothened signaling pathway	signal transduction	P	Protein dispatched homolog 2
ruditapes2_c2470	smoothened signaling pathway	signal transduction	P	Protein dispatched homolog 2
ruditapes_c16501	metabolic process	other metabolic processes	P	Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB (EC 3.5.1.110) (Ureidoacrylate amidohydrolase)
ruditapes_c20151	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c20151	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c20151	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c29797	DNA replication	DNA metabolism	P	DnaA initiator-associating protein DiaA
ruditapes_c29797	carbohydrate metabolic process	other metabolic processes	P	DnaA initiator-associating protein DiaA
ruditapes2_c1539	rRNA methylation	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.178) (16S rRNA m5C1407 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmF)
ruditapes2_c1539	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.178) (16S rRNA m5C1407 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmF)
ruditapes2_c1539	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.178) (16S rRNA m5C1407 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmF)
ruditapes2_c761	NAD biosynthetic process	other metabolic processes	P	NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5)
ruditapes_lrc35675	phospholipid biosynthetic process	other metabolic processes	P	CDP-diacylglycerol pyrophosphatase (EC 3.6.1.26) (CDP-diacylglycerol phosphatidylhydrolase) (CDP-diglyceride hydrolase)
ruditapes_c22276	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c22276	oxidation reduction	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c21451	DNA repair	stress response	P	DNA replication and repair protein RecF
ruditapes_c21451	DNA repair	DNA metabolism	P	DNA replication and repair protein RecF
ruditapes_c21451	SOS response	stress response	P	DNA replication and repair protein RecF
ruditapes_c21451	response to DNA damage stimulus	stress response	P	DNA replication and repair protein RecF
ruditapes_c21451	DNA replication	DNA metabolism	P	DNA replication and repair protein RecF
ruditapes_c10345	cellular alcohol metabolic process	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c10345	oxidation reduction	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c26906	glycine betaine biosynthetic process from choline	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c26906	oxidation reduction	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c10345	glycine betaine biosynthetic process from choline	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c26906	cellular alcohol metabolic process	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c10031	glutamine metabolic process	other metabolic processes	P	Cobyric acid synthase
ruditapes_c10031	cobalamin biosynthetic process	other metabolic processes	P	Cobyric acid synthase
ruditapes_c7318	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-quinone oxidoreductase subunit N (EC 1.6.99.5) (NADH dehydrogenase I subunit N) (NDH-1 subunit N)
ruditapes_c7318	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit N (EC 1.6.99.5) (NADH dehydrogenase I subunit N) (NDH-1 subunit N)
ruditapes_c7318	transport	transport	P	NADH-quinone oxidoreductase subunit N (EC 1.6.99.5) (NADH dehydrogenase I subunit N) (NDH-1 subunit N)
ruditapes_c15650	thiamin biosynthetic process	other metabolic processes	P	Thiamine-phosphate synthase (TP synthase) (TPS) (EC 2.5.1.3) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
ruditapes_c28327	menaquinone biosynthetic process	other metabolic processes	P	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (SEPHCHC synthase) (EC 2.2.1.9) (Menaquinone biosynthesis protein MenD)
ruditapes_c6546	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit I (eIF3i)
ruditapes_c6546	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit I (eIF3i)
ruditapes_c10143	biological_process	other biological processes	P	Coiled-coil domain-containing protein 22 homolog
ruditapes_lrc38535	translation	protein metabolism	P	40S ribosomal protein S3a
ruditapes_c771	lipid metabolic process	other metabolic processes	P	Probable serine incorporator
ruditapes_c771	phospholipid biosynthetic process	other metabolic processes	P	Probable serine incorporator
ruditapes_s39701	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes2_lrc4716	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes2_lrc7137	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_c37404	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes2_c5485	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes2_lrc6841	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_s36761	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes2_c5485	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_c37404	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_lrc33262	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_lrc33557	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_lrc37526	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes2_lrc6841	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_lrc38327	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_lrc33262	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes2_lrc7137	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes2_lrc6140	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_s36761	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_s36630	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_lrc38327	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_s36630	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes2_lrc6140	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_lrc37526	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_lrc33557	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_s39701	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes2_lrc4716	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_c28817	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cell division cycle 5-related protein (Cdc5-like protein)
ruditapes_c28817	mRNA processing	RNA metabolism	P	Cell division cycle 5-related protein (Cdc5-like protein)
ruditapes_c28817	RNA splicing	RNA metabolism	P	Cell division cycle 5-related protein (Cdc5-like protein)
ruditapes_c28817	cell cycle	cell cycle and proliferation	P	Cell division cycle 5-related protein (Cdc5-like protein)
ruditapes_c9924	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein osgep (t(6)A37 threonylcarbamoyladenosine biosynthesis protein osgep)
ruditapes_c9924	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein osgep (t(6)A37 threonylcarbamoyladenosine biosynthesis protein osgep)
ruditapes_c9924	metabolic process	other metabolic processes	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein osgep (t(6)A37 threonylcarbamoyladenosine biosynthesis protein osgep)
ruditapes2_lrc3520	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Glucose transport transcription regulator RGT1 (Restores glucose transport protein 1)
ruditapes2_lrc3520	"transcription, DNA-dependent"	RNA metabolism	P	Glucose transport transcription regulator RGT1 (Restores glucose transport protein 1)
ruditapes_c6913	protein transport	transport	P	Protein SOP4
ruditapes_c6913	transport	transport	P	Protein SOP4
ruditapes_c22316	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Oleate activated transcription factor 3
ruditapes_c22316	"transcription, DNA-dependent"	RNA metabolism	P	Oleate activated transcription factor 3
ruditapes_c7677	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator POG1
ruditapes_c7677	mitosis	cell cycle and proliferation	P	Transcriptional activator POG1
ruditapes_c7677	mitosis	cell organization and biogenesis	P	Transcriptional activator POG1
ruditapes_c7677	cell division	other biological processes	P	Transcriptional activator POG1
ruditapes_c7677	response to stress	stress response	P	Transcriptional activator POG1
ruditapes_c7677	cell cycle	cell cycle and proliferation	P	Transcriptional activator POG1
ruditapes_c7677	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator POG1
ruditapes_c8149	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_c21724	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase atg1 (EC 2.7.11.1) (Autophagy-related protein 1)
ruditapes_c21724	transport	transport	P	Serine/threonine-protein kinase atg1 (EC 2.7.11.1) (Autophagy-related protein 1)
ruditapes_c21724	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase atg1 (EC 2.7.11.1) (Autophagy-related protein 1)
ruditapes_c21724	autophagy	other metabolic processes	P	Serine/threonine-protein kinase atg1 (EC 2.7.11.1) (Autophagy-related protein 1)
ruditapes_c21724	protein transport	transport	P	Serine/threonine-protein kinase atg1 (EC 2.7.11.1) (Autophagy-related protein 1)
ruditapes_c25336	iron-sulfur cluster assembly	other metabolic processes	P	Cytosolic Fe-S cluster assembly factor NAR1 (Nuclear architecture-related protein 1)
ruditapes_c29692	metabolic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c29692	tryptophan catabolic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c29692	pyridine nucleotide biosynthetic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c29692	NAD biosynthetic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c23433	autophagy	other metabolic processes	P	Autophagy protein 5
ruditapes_c23433	protein transport	transport	P	Autophagy protein 5
ruditapes_c23433	transport	transport	P	Autophagy protein 5
ruditapes_c2982	DNA repair	stress response	P	ATP-dependent DNA helicase MPH1 (EC 3.6.4.12)
ruditapes_c2982	DNA repair	DNA metabolism	P	ATP-dependent DNA helicase MPH1 (EC 3.6.4.12)
ruditapes_c2982	response to DNA damage stimulus	stress response	P	ATP-dependent DNA helicase MPH1 (EC 3.6.4.12)
ruditapes_c12741	endocytosis	transport	P	Actin cytoskeleton-regulatory complex protein PAN1
ruditapes_c12741	endocytosis	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1
ruditapes2_c1841	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes2_c1841	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c30569	pathogenesis	other biological processes	P	Extracellular metalloproteinase 1 (EC 3.4.24.-) (Fungalysin MEP1) (Fragment)
ruditapes_c30569	proteolysis	protein metabolism	P	Extracellular metalloproteinase 1 (EC 3.4.24.-) (Fungalysin MEP1) (Fragment)
ruditapes2_c490	defense response to bacterium	stress response	P	Waprin-Thr1
ruditapes2_c490	negative regulation of peptidase activity	other biological processes	P	Waprin-Thr1
ruditapes_c13482	defense response to bacterium	stress response	P	Waprin-Lio1 (Fragment)
ruditapes_c13482	negative regulation of peptidase activity	other biological processes	P	Waprin-Lio1 (Fragment)
ruditapes_c11289	transport	transport	P	Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (xGlyT1) (Solute carrier family 6 member 9)
ruditapes_c11289	neurotransmitter transport	transport	P	Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (xGlyT1) (Solute carrier family 6 member 9)
ruditapes_c11289	amino acid transport	transport	P	Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (xGlyT1) (Solute carrier family 6 member 9)
ruditapes_c9603	transport	transport	P	Sodium- and chloride-dependent glycine transporter 2 (GlyT-2) (GlyT2) (xGlyT2) (Solute carrier family 6 member 5)
ruditapes_c9603	neurotransmitter transport	transport	P	Sodium- and chloride-dependent glycine transporter 2 (GlyT-2) (GlyT2) (xGlyT2) (Solute carrier family 6 member 5)
ruditapes2_c1123	neurotransmitter transport	transport	P	Sodium- and chloride-dependent glycine transporter 2 (GlyT-2) (GlyT2) (xGlyT2) (Solute carrier family 6 member 5)
ruditapes2_c1123	transport	transport	P	Sodium- and chloride-dependent glycine transporter 2 (GlyT-2) (GlyT2) (xGlyT2) (Solute carrier family 6 member 5)
ruditapes2_c2658	histidine catabolic process	other metabolic processes	P	Histidine ammonia-lyase (Histidase) (EC 4.3.1.3)
ruditapes2_c2658	biosynthetic process	other metabolic processes	P	Histidine ammonia-lyase (Histidase) (EC 4.3.1.3)
ruditapes2_c2658	histidine metabolic process	other metabolic processes	P	Histidine ammonia-lyase (Histidase) (EC 4.3.1.3)
ruditapes_c28212	biological_process	other biological processes	P	Hsp90 co-chaperone Cdc37-like 1
ruditapes_c31344	translation	protein metabolism	P	50S ribosomal protein L25 (General stress protein CTC)
ruditapes_s38044	translation	protein metabolism	P	50S ribosomal protein L6
ruditapes_c18402	cellular amino acid biosynthetic process	other metabolic processes	P	Methylthioribose kinase (MTR kinase) (EC 2.7.1.100)
ruditapes_c18402	phosphorylation	other metabolic processes	P	Methylthioribose kinase (MTR kinase) (EC 2.7.1.100)
ruditapes_c18402	methionine biosynthetic process	other metabolic processes	P	Methylthioribose kinase (MTR kinase) (EC 2.7.1.100)
ruditapes_c11821	cell division	other biological processes	P	HTH-type transcriptional regulator YofA
ruditapes_c11821	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator YofA
ruditapes_c11821	barrier septum formation	cell organization and biogenesis	P	HTH-type transcriptional regulator YofA
ruditapes_c11821	cell cycle	cell cycle and proliferation	P	HTH-type transcriptional regulator YofA
ruditapes_c11821	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator YofA
ruditapes_c15259	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c15259	cellular amino acid biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c22295	chromosome segregation	other biological processes	P	Segregation and condensation protein B
ruditapes_c22295	chromosome separation	cell cycle and proliferation	P	Segregation and condensation protein B
ruditapes_c22295	cell cycle	cell cycle and proliferation	P	Segregation and condensation protein B
ruditapes_c22295	cell division	other biological processes	P	Segregation and condensation protein B
ruditapes_c146	flagellum organization	cell organization and biogenesis	P	Flagellar assembly factor FliW
ruditapes_c146	flagellum assembly	cell organization and biogenesis	P	Flagellar assembly factor FliW
ruditapes_c926	nucleoside metabolic process	other metabolic processes	P	Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
ruditapes_c926	metabolic process	other metabolic processes	P	Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
ruditapes_c926	uracil salvage	other metabolic processes	P	Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
ruditapes2_c1145	inositol catabolic process	other metabolic processes	P	"3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (THcHDO hydrolase) (EC 3.7.1.n2)"
ruditapes_c29138	translation	protein metabolism	P	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase)
ruditapes_c29138	selenocysteine incorporation	protein metabolism	P	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase)
ruditapes_c13857	lipid A biosynthetic process	other metabolic processes	P	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) (UDP-3-O-acyl-GlcNAc deacetylase)
ruditapes_c13857	lipid biosynthetic process	other metabolic processes	P	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) (UDP-3-O-acyl-GlcNAc deacetylase)
ruditapes_c9057	alanine metabolic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c9057	peptidoglycan biosynthetic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c9057	regulation of cell shape	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c9057	cell wall organization	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c9823	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c9823	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c29447	thiamin biosynthetic process	other metabolic processes	P	Phosphomethylpyrimidine synthase (EC 4.1.99.17) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
ruditapes_c14088	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_c14088	translational elongation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_c14088	translation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_c17279	purine ribonucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylglycinamide formyltransferase 2 (GART 2) (EC 2.1.2.-) (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) (GAR transformylase 2)
ruditapes_c17279	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylglycinamide formyltransferase 2 (GART 2) (EC 2.1.2.-) (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) (GAR transformylase 2)
ruditapes_c23045	cytidine deamination	other metabolic processes	P	Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase) (CDA)
ruditapes_lrc9568	arginine metabolic process	other metabolic processes	P	N-succinylarginine dihydrolase (EC 3.5.3.23)
ruditapes_c816	arginine metabolic process	other metabolic processes	P	Succinylornithine transaminase (EC 2.6.1.81) (Succinylornithine aminotransferase)
ruditapes_c816	cellular amino acid metabolic process	other metabolic processes	P	Succinylornithine transaminase (EC 2.6.1.81) (Succinylornithine aminotransferase)
ruditapes_c11746	transmembrane transport	transport	P	Uncharacterized MFS-type transporter CKO
ruditapes_c11746	transport	transport	P	Uncharacterized MFS-type transporter CKO
ruditapes_c8157	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Sigma factor-binding protein Crl
ruditapes_c8157	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Sigma factor-binding protein Crl
ruditapes_c8157	"transcription, DNA-dependent"	RNA metabolism	P	Sigma factor-binding protein Crl
ruditapes_lrc36064	pyridoxine biosynthetic process	other metabolic processes	P	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase)
ruditapes_lrc36064	oxidation reduction	other metabolic processes	P	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase)
ruditapes_c19381	phosphorylation	other metabolic processes	P	Methylthioribose kinase (MTR kinase) (EC 2.7.1.100)
ruditapes_c19381	cellular amino acid biosynthetic process	other metabolic processes	P	Methylthioribose kinase (MTR kinase) (EC 2.7.1.100)
ruditapes_c19381	methionine biosynthetic process	other metabolic processes	P	Methylthioribose kinase (MTR kinase) (EC 2.7.1.100)
ruditapes_c17273	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes_c17273	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes_c17273	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes_c20191	DNA recombination	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c20191	DNA repair	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c20191	DNA repair	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c20191	regulation of ARF GTPase activity	signal transduction	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c20191	response to DNA damage stimulus	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c18917	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_c18917	tricarboxylic acid cycle	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes2_lrc4181	cellular amino acid biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes2_lrc4181	phosphorylation	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes2_lrc4181	threonine metabolic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes2_lrc4181	threonine biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes_c22103	gluconeogenesis	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes_c22103	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes_c12810	thiamin biosynthetic process	other metabolic processes	P	Probable tRNA sulfurtransferase (EC 2.8.1.4) (Sulfur carrier protein ThiS sulfurtransferase) (Thiamine biosynthesis protein ThiI) (tRNA 4-thiouridine synthase)
ruditapes2_c176	DNA integration	DNA metabolism	P	Tyrosine recombinase XerS
ruditapes2_c176	cell cycle	cell cycle and proliferation	P	Tyrosine recombinase XerS
ruditapes2_c176	chromosome segregation	other biological processes	P	Tyrosine recombinase XerS
ruditapes2_c176	DNA recombination	DNA metabolism	P	Tyrosine recombinase XerS
ruditapes2_c176	cell division	other biological processes	P	Tyrosine recombinase XerS
ruditapes_c8797	oxidation reduction	other metabolic processes	P	Ferredoxin--NADP reductase (FNR) (Fd-NADP(+) reductase) (EC 1.18.1.2)
ruditapes_c16413	double-strand break repair	stress response	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_c16413	DNA repair	stress response	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_c16413	DNA repair	DNA metabolism	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_c16413	double-strand break repair	DNA metabolism	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_c16413	response to DNA damage stimulus	stress response	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_c7169	barrier septum formation	cell organization and biogenesis	P	Septation ring formation regulator EzrA
ruditapes_c7169	cell cycle	cell cycle and proliferation	P	Septation ring formation regulator EzrA
ruditapes_c7169	septin ring assembly	cell organization and biogenesis	P	Septation ring formation regulator EzrA
ruditapes_c7169	cell division	other biological processes	P	Septation ring formation regulator EzrA
ruditapes_c16960	metabolic process	other metabolic processes	P	Germanicol synthase (RsM1) (EC 5.4.99.34)
ruditapes_c23344	transport	transport	P	Transient receptor potential cation channel trpm
ruditapes_c23344	biological_process	other biological processes	P	Transient receptor potential cation channel trpm
ruditapes_c23344	transmembrane transport	transport	P	Transient receptor potential cation channel trpm
ruditapes_c23344	ion transport	transport	P	Transient receptor potential cation channel trpm
ruditapes_c13976	metabolic process	other metabolic processes	P	"Alpha-aminoadipic semialdehyde synthase, mitochondrial (LKR/SDH) [Includes: Lysine ketoglutarate reductase (LKR) (LOR) (EC 1.5.1.8); Saccharopine dehydrogenase (SDH) (EC 1.5.1.9)]"
ruditapes_c13976	oxidation reduction	other metabolic processes	P	"Alpha-aminoadipic semialdehyde synthase, mitochondrial (LKR/SDH) [Includes: Lysine ketoglutarate reductase (LKR) (LOR) (EC 1.5.1.8); Saccharopine dehydrogenase (SDH) (EC 1.5.1.9)]"
ruditapes_c10297	growth	other biological processes	P	Growth/differentiation factor 6-B (GDF-6-B) (Growth differentiation factor 6b) (Protein dynamo)
ruditapes_c30849	carbohydrate metabolic process	other metabolic processes	P	Phosphoglucosamine mutase (EC 5.4.2.10)
ruditapes_c25786	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c25786	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c25786	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c15776	tRNA processing	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c15776	RNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c15776	biopolymer modification	other metabolic processes	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c15776	tRNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c23591	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23591	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23591	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23591	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23591	metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23591	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23591	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23591	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c24690	metabolic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c24690	lysine biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c24690	cellular amino acid biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c24690	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c24690	diaminopimelate biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c30643	GTP metabolic process	other metabolic processes	P	Deoxyguanosinetriphosphate triphosphohydrolase-like protein
ruditapes_c7985	oxidation reduction	other metabolic processes	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c7985	queuosine biosynthetic process	RNA metabolism	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c11248	isoprenoid biosynthetic process	other metabolic processes	P	Isopentenyl-diphosphate delta-isomerase (IPP isomerase) (EC 5.3.3.2) (Isopentenyl pyrophosphate isomerase)
ruditapes_c11248	oxidation reduction	other metabolic processes	P	Isopentenyl-diphosphate delta-isomerase (IPP isomerase) (EC 5.3.3.2) (Isopentenyl pyrophosphate isomerase)
ruditapes_c2643	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c2643	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c2643	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c2643	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c2643	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c19406	DNA repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c19406	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c19406	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutS
ruditapes_c19406	mismatch repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c19406	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes2_lrc3079	translation	protein metabolism	P	50S ribosomal protein L3
ruditapes2_lrc6819	GTP catabolic process	other metabolic processes	P	GTPase obg (GTP-binding protein obg)
ruditapes_c10703	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c10703	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c10703	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c10703	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c10703	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c10703	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c14374	DNA repair	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c14374	DNA repair	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c14374	response to DNA damage stimulus	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c14374	DNA recombination	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_lrc30592	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes_lrc30592	nitrogen compound metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes_lrc30592	cellular amino acid biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes_lrc30592	arginine biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes_lrc30592	metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes_s40134	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_lrc7999	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_lrc7999	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c3834	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c3834	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_lrc7999	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_lrc7999	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_lrc7999	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c3834	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c3834	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c3834	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c39329	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c39329	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c39329	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c39329	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c39329	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c39329	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc28279	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit alpha (RNAP subunit alpha) (EC 2.7.7.6) (RNA polymerase subunit alpha) (Transcriptase subunit alpha)
ruditapes_c16453	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c16453	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c16453	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c28205	response to stress	stress response	P	Lon protease (EC 3.4.21.53) (ATP-dependent protease La)
ruditapes_c28205	proteolysis	protein metabolism	P	Lon protease (EC 3.4.21.53) (ATP-dependent protease La)
ruditapes_c21515	glutamine metabolic process	other metabolic processes	P	Glutamine amidotransferase subunit PdxT (EC 2.6.-.-) (Glutamine amidotransferase glutaminase subunit PdxT)
ruditapes_c28741	DNA repair	stress response	P	Holliday junction resolvase RecU (EC 3.1.22.-) (Recombination protein U homolog)
ruditapes_c28741	DNA repair	DNA metabolism	P	Holliday junction resolvase RecU (EC 3.1.22.-) (Recombination protein U homolog)
ruditapes_c28741	DNA recombination	DNA metabolism	P	Holliday junction resolvase RecU (EC 3.1.22.-) (Recombination protein U homolog)
ruditapes_c28741	response to DNA damage stimulus	stress response	P	Holliday junction resolvase RecU (EC 3.1.22.-) (Recombination protein U homolog)
ruditapes_lrc33639	methylglyoxal biosynthetic process	other metabolic processes	P	Methylglyoxal synthase (MGS) (EC 4.2.3.3)
ruditapes2_lrc5887	methylglyoxal biosynthetic process	other metabolic processes	P	Methylglyoxal synthase (MGS) (EC 4.2.3.3)
ruditapes_lrc35574	methylglyoxal biosynthetic process	other metabolic processes	P	Methylglyoxal synthase (MGS) (EC 4.2.3.3)
ruditapes2_lrc4977	methylglyoxal biosynthetic process	other metabolic processes	P	Methylglyoxal synthase (MGS) (EC 4.2.3.3)
ruditapes_lrc35163	methylglyoxal biosynthetic process	other metabolic processes	P	Methylglyoxal synthase (MGS) (EC 4.2.3.3)
ruditapes_c12755	cellular amino acid biosynthetic process	other metabolic processes	P	3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase)
ruditapes_c12755	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase)
ruditapes2_c2882	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c3547	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes2_c2882	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes2_c2882	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c3547	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c3547	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c11523	protein metabolic process	protein metabolism	P	Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase)
ruditapes_c11523	proteolysis	protein metabolism	P	Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase)
ruditapes_c18907	one-carbon compound metabolic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes_c22719	one-carbon compound metabolic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes_c22719	folic acid and derivative biosynthetic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes_c18907	folic acid and derivative biosynthetic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes2_c2677	transport	transport	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes2_c2677	electron transport chain	other metabolic processes	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes2_c2677	nitrogen compound metabolic process	other metabolic processes	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes2_c2677	oxidation reduction	other metabolic processes	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes_lrc8204	dephosphorylation	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_lrc8204	cell wall organization	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_lrc8204	regulation of cell shape	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_lrc8204	response to antibiotic	other biological processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_lrc8204	peptidoglycan biosynthetic process	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c24519	RNA repair	RNA metabolism	P	"Multifunctional CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.72) (CCA tRNA nucleotidyltransferase) (tRNA CCA-pyrophosphorylase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA nucleotidyltransferase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-); Phosphatase (EC 3.1.3.-)]"
ruditapes_c24519	RNA processing	RNA metabolism	P	"Multifunctional CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.72) (CCA tRNA nucleotidyltransferase) (tRNA CCA-pyrophosphorylase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA nucleotidyltransferase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-); Phosphatase (EC 3.1.3.-)]"
ruditapes_c24519	tRNA processing	RNA metabolism	P	"Multifunctional CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.72) (CCA tRNA nucleotidyltransferase) (tRNA CCA-pyrophosphorylase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA nucleotidyltransferase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-); Phosphatase (EC 3.1.3.-)]"
ruditapes_c24519	metabolic process	other metabolic processes	P	"Multifunctional CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.72) (CCA tRNA nucleotidyltransferase) (tRNA CCA-pyrophosphorylase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA nucleotidyltransferase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-); Phosphatase (EC 3.1.3.-)]"
ruditapes_c24519	tRNA 3'-terminal CCA addition	RNA metabolism	P	"Multifunctional CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.72) (CCA tRNA nucleotidyltransferase) (tRNA CCA-pyrophosphorylase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA nucleotidyltransferase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-); Phosphatase (EC 3.1.3.-)]"
ruditapes2_c730	cytidine deamination	other metabolic processes	P	Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase) (CDA)
ruditapes_c14073	DNA recombination	DNA metabolism	P	Recombination-associated protein RdgC
ruditapes2_c453	cellular amino acid biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes2_c453	cysteine biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes2_c453	oxidation reduction	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c11524	porphyrin biosynthetic process	other metabolic processes	P	Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37)
ruditapes_c4338	queuosine biosynthetic process	RNA metabolism	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c4338	oxidation reduction	other metabolic processes	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c5449	response to stress	stress response	P	Small heat shock protein IbpA (16 kDa heat shock protein A)
ruditapes_c25864	oxidation reduction	other metabolic processes	P	Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)
ruditapes2_c1960	protein metabolic process	protein metabolism	P	Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)
ruditapes2_c1960	oxidation reduction	other metabolic processes	P	Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)
ruditapes_c25864	protein metabolic process	protein metabolism	P	Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)
ruditapes2_c2456	threonine biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes2_c2456	threonine metabolic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes2_c2456	phosphorylation	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes2_c2456	cellular amino acid biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes2_lrc7203	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes2_lrc7374	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes2_lrc4655	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes_lrc36288	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes_lrc36288	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes_lrc36288	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes2_lrc4655	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes2_lrc4655	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes2_lrc7203	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes2_lrc7203	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes_s39432	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes2_lrc7374	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes_s39432	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes2_lrc7374	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes_s39432	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes_s39432	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes_lrc36288	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes2_lrc7374	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes2_lrc7203	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes2_lrc4655	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes_lrc39434	GTP metabolic process	other metabolic processes	P	Deoxyguanosinetriphosphate triphosphohydrolase (dGTP triphosphohydrolase) (dGTPase) (EC 3.1.5.1)
ruditapes_c19062	sodium ion transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit D (Na(+)-NQR subunit D) (Na(+)-translocating NQR subunit D) (EC 1.6.5.-) (NQR complex subunit D) (NQR-1 subunit D)
ruditapes_c19062	ion transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit D (Na(+)-NQR subunit D) (Na(+)-translocating NQR subunit D) (EC 1.6.5.-) (NQR complex subunit D) (NQR-1 subunit D)
ruditapes_c19062	oxidation reduction	other metabolic processes	P	Na(+)-translocating NADH-quinone reductase subunit D (Na(+)-NQR subunit D) (Na(+)-translocating NQR subunit D) (EC 1.6.5.-) (NQR complex subunit D) (NQR-1 subunit D)
ruditapes_c19062	transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit D (Na(+)-NQR subunit D) (Na(+)-translocating NQR subunit D) (EC 1.6.5.-) (NQR complex subunit D) (NQR-1 subunit D)
ruditapes_c10775	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_c10775	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_c18547	oxidation reduction	other metabolic processes	P	Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase)
ruditapes_c18547	pyridoxal phosphate biosynthetic process	other metabolic processes	P	Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase)
ruditapes_c18547	pyridoxine biosynthetic process	other metabolic processes	P	Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase)
ruditapes_c4946	lipid phosphorylation	other metabolic processes	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c4946	phospholipid biosynthetic process	other metabolic processes	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c4946	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c4946	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c4946	phosphorylation	other metabolic processes	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c28006	lipid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2)
ruditapes_c28006	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2)
ruditapes_c16204	metabolic process	other metabolic processes	P	Glycogen debranching enzyme (EC 3.2.1.-) (Glycogen operon protein GlgX)
ruditapes_c16204	glycogen catabolic process	other metabolic processes	P	Glycogen debranching enzyme (EC 3.2.1.-) (Glycogen operon protein GlgX)
ruditapes_c16204	glycogen metabolic process	other metabolic processes	P	Glycogen debranching enzyme (EC 3.2.1.-) (Glycogen operon protein GlgX)
ruditapes_c16204	carbohydrate metabolic process	other metabolic processes	P	Glycogen debranching enzyme (EC 3.2.1.-) (Glycogen operon protein GlgX)
ruditapes_c30097	transmembrane transport	transport	P	Cation-efflux pump FieF
ruditapes_c30097	zinc ion transport	transport	P	Cation-efflux pump FieF
ruditapes_c30097	cation transport	transport	P	Cation-efflux pump FieF
ruditapes_c30097	transport	transport	P	Cation-efflux pump FieF
ruditapes_c30097	ferrous iron transport	transport	P	Cation-efflux pump FieF
ruditapes_c27941	translation	protein metabolism	P	50S ribosomal protein L13
ruditapes_c30599	mismatch repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c30599	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c30599	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutS
ruditapes_c30599	DNA repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c30599	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c19119	one-carbon compound metabolic process	other metabolic processes	P	GTP cyclohydrolase 1 (EC 3.5.4.16) (GTP cyclohydrolase I) (GTP-CH-I)
ruditapes_c19119	tetrahydrofolate biosynthetic process	other metabolic processes	P	GTP cyclohydrolase 1 (EC 3.5.4.16) (GTP cyclohydrolase I) (GTP-CH-I)
ruditapes_c22635	lipid A biosynthetic process	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_c22635	phosphorylation	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_c22635	lipid biosynthetic process	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_c4866	ATP biosynthetic process	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c4866	proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c4866	ATP synthesis coupled proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c4866	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c4866	transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c4866	ion transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c15892	lipid A biosynthetic process	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_c15892	phosphorylation	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_c15892	lipid biosynthetic process	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_c27930	metabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c27930	oxidation reduction	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c27930	fatty acid catabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c27930	lipid metabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c27930	lipid catabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c27930	fatty acid metabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c9421	transport	transport	P	Membrane-bound lytic murein transglycosylase F (EC 4.2.2.n1) (Murein lyase F)
ruditapes_c9421	cell wall organization	cell organization and biogenesis	P	Membrane-bound lytic murein transglycosylase F (EC 4.2.2.n1) (Murein lyase F)
ruditapes_c3224	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_c3224	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_c11953	oxidation reduction	other metabolic processes	P	NAD-dependent malic enzyme (NAD-ME) (EC 1.1.1.38)
ruditapes_c11953	malate metabolic process	other metabolic processes	P	NAD-dependent malic enzyme (NAD-ME) (EC 1.1.1.38)
ruditapes_s37803	histidine catabolic process to glutamate and formamide	other metabolic processes	P	Imidazolonepropionase (EC 3.5.2.7) (Imidazolone-5-propionate hydrolase)
ruditapes_s37803	histidine metabolic process	other metabolic processes	P	Imidazolonepropionase (EC 3.5.2.7) (Imidazolone-5-propionate hydrolase)
ruditapes_c7487	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes_c7487	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes_c7487	proton transport	transport	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes_c7487	transport	transport	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes_c7487	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes_c7487	ion transport	transport	P	ATP synthase subunit b 2 (ATP synthase F(0) sector subunit b 2) (ATPase subunit I 2) (F-type ATPase subunit b 2) (F-ATPase subunit b 2)
ruditapes_c5891	urea metabolic process	other metabolic processes	P	Urease accessory protein UreE
ruditapes_c5891	protein complex assembly	cell organization and biogenesis	P	Urease accessory protein UreE
ruditapes_c5891	protein folding	protein metabolism	P	Urease accessory protein UreE
ruditapes_c5891	enzyme active site formation	protein metabolism	P	Urease accessory protein UreE
ruditapes_lrc26446	cobalamin biosynthetic process	other metabolic processes	P	Cobyric acid synthase
ruditapes_lrc26446	glutamine metabolic process	other metabolic processes	P	Cobyric acid synthase
ruditapes_c30802	metabolic process	other metabolic processes	P	Mitochondrial cardiolipin hydrolase (EC 3.1.-.-) (Phospholipase D6 homolog) (PLD 6)
ruditapes_c30802	meiosis	cell cycle and proliferation	P	Mitochondrial cardiolipin hydrolase (EC 3.1.-.-) (Phospholipase D6 homolog) (PLD 6)
ruditapes_c30802	lipid catabolic process	other metabolic processes	P	Mitochondrial cardiolipin hydrolase (EC 3.1.-.-) (Phospholipase D6 homolog) (PLD 6)
ruditapes_c22604	tRNA processing	RNA metabolism	P	tRNA-splicing ligase RtcB homolog (EC 6.5.1.3)
ruditapes2_c2391	negative regulation of peptidase activity	other biological processes	P	Alpha-2-macroglobulin-like protein 1 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 9)
ruditapes2_c2391	negative regulation of endopeptidase activity	other biological processes	P	Alpha-2-macroglobulin-like protein 1 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 9)
ruditapes2_c2391	regulation of endopeptidase activity	other biological processes	P	Alpha-2-macroglobulin-like protein 1 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 9)
ruditapes2_c995	biological_process	other biological processes	P	"Cytochrome c oxidase assembly protein 3 homolog, mitochondrial (Coiled-coil domain-containing protein 56)"
ruditapes_c13835	biological_process	other biological processes	P	"Cytochrome c oxidase assembly protein 3 homolog, mitochondrial (Coiled-coil domain-containing protein 56)"
ruditapes_c20093	methylation	other metabolic processes	P	Methyltransferase-like protein 2-A (EC 2.1.1.-)
ruditapes2_c2382	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor IIIB 50 kDa subunit (B-related factor 2) (BRF-2)
ruditapes2_c2382	transcription initiation	RNA metabolism	P	Transcription factor IIIB 50 kDa subunit (B-related factor 2) (BRF-2)
ruditapes2_c2382	transcription initiation	cell organization and biogenesis	P	Transcription factor IIIB 50 kDa subunit (B-related factor 2) (BRF-2)
ruditapes2_c2382	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor IIIB 50 kDa subunit (B-related factor 2) (BRF-2)
ruditapes2_c1468	metabolic process	other metabolic processes	P	Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta) (SCS-beta)
ruditapes2_c1468	tricarboxylic acid cycle	other metabolic processes	P	Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta) (SCS-beta)
ruditapes2_lrc6031	translation	protein metabolism	P	Peptide deformylase (PDF) (EC 3.5.1.88) (Polypeptide deformylase)
ruditapes_c15207	tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c15207	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c15207	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c15207	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c15207	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c15207	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c8742	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c8742	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c8742	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c8742	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c8742	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c8742	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c2097	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Integration host factor subunit alpha (IHF-alpha)
ruditapes_c2097	regulation of translation	protein metabolism	P	Integration host factor subunit alpha (IHF-alpha)
ruditapes_c2097	"transcription, DNA-dependent"	RNA metabolism	P	Integration host factor subunit alpha (IHF-alpha)
ruditapes_c2097	DNA recombination	DNA metabolism	P	Integration host factor subunit alpha (IHF-alpha)
ruditapes_c22015	glycolysis	other metabolic processes	P	Phosphoglycerate kinase (EC 2.7.2.3)
ruditapes_c22015	phosphorylation	other metabolic processes	P	Phosphoglycerate kinase (EC 2.7.2.3)
ruditapes_c7376	translation	protein metabolism	P	Glutamyl-tRNA(Gln) amidotransferase subunit E (Glu-ADT subunit E) (EC 6.3.5.-)
ruditapes_c20750	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c20750	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c20750	cellular amino acid metabolic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c15853	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase)
ruditapes_c5986	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c5986	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c5986	DNA ligation during DNA repair	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c5986	DNA ligation during DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c5986	DNA recombination	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c5986	cell cycle	cell cycle and proliferation	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c5986	cell division	other biological processes	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c5986	DNA repair	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c5986	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c19097	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Protein Cmaq
ruditapes_c19084	glycine catabolic process	other metabolic processes	P	Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein)
ruditapes_c9178	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c9178	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c21111	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c21111	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c21111	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c21111	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c21111	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c21111	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c14746	rRNA processing	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c14746	rRNA methylation	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c14746	methylation	other metabolic processes	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c14746	rRNA modification	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c17626	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)
ruditapes_c17626	lipid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)
ruditapes_c10235	ion transport	transport	P	Gamma-aminobutyric acid receptor subunit rho-3 (GABA(A) receptor subunit rho-3) (GABA(C) receptor)
ruditapes_c10235	chloride transport	transport	P	Gamma-aminobutyric acid receptor subunit rho-3 (GABA(A) receptor subunit rho-3) (GABA(C) receptor)
ruditapes_c10235	transport	transport	P	Gamma-aminobutyric acid receptor subunit rho-3 (GABA(A) receptor subunit rho-3) (GABA(C) receptor)
ruditapes_c10235	gamma-aminobutyric acid signaling pathway	signal transduction	P	Gamma-aminobutyric acid receptor subunit rho-3 (GABA(A) receptor subunit rho-3) (GABA(C) receptor)
ruditapes_c10235	synaptic transmission	cell-cell signaling	P	Gamma-aminobutyric acid receptor subunit rho-3 (GABA(A) receptor subunit rho-3) (GABA(C) receptor)
ruditapes_c10235	transmembrane transport	transport	P	Gamma-aminobutyric acid receptor subunit rho-3 (GABA(A) receptor subunit rho-3) (GABA(C) receptor)
ruditapes_c10235	transmembrane ion transport	transport	P	Gamma-aminobutyric acid receptor subunit rho-3 (GABA(A) receptor subunit rho-3) (GABA(C) receptor)
ruditapes_c12483	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 850
ruditapes_c12483	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 850
ruditapes_c18209	DNA repair	stress response	P	Structure-specific endonuclease subunit SLX1 (EC 3.6.1.-)
ruditapes_c18209	DNA repair	DNA metabolism	P	Structure-specific endonuclease subunit SLX1 (EC 3.6.1.-)
ruditapes_c18209	DNA recombination	DNA metabolism	P	Structure-specific endonuclease subunit SLX1 (EC 3.6.1.-)
ruditapes_c18209	response to DNA damage stimulus	stress response	P	Structure-specific endonuclease subunit SLX1 (EC 3.6.1.-)
ruditapes_c19244	rRNA processing	RNA metabolism	P	Pescadillo homolog
ruditapes_c19244	ribosome biogenesis	other biological processes	P	Pescadillo homolog
ruditapes_c13262	proteolysis	protein metabolism	P	Zinc metalloproteinase-disintegrin BfMP (EC 3.4.24.-) (Snake venom metalloproteinase) (SVMP) (Fragment)
ruditapes_c26844	lipid biosynthetic process	other metabolic processes	P	"Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)"
ruditapes_c26844	fatty acid biosynthetic process	other metabolic processes	P	"Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)"
ruditapes_c16462	ATP synthesis coupled electron transport	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c16462	oxidation reduction	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c16462	transport	transport	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes2_lrc5676	cell adhesion	cell adhesion	P	Collagen alpha-5(VI) chain (Collagen alpha-1(XXIX) chain) (von Willebrand factor A domain-containing protein 4)
ruditapes_c16095	cell adhesion	cell adhesion	P	Collagen alpha-5(VI) chain (Collagen alpha-1(XXIX) chain) (von Willebrand factor A domain-containing protein 4)
ruditapes_c3356	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit a, plastid (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c3356	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit a, plastid (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c3356	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit a, plastid (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c3356	ion transport	transport	P	"ATP synthase subunit a, plastid (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c3356	transport	transport	P	"ATP synthase subunit a, plastid (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c3356	proton transport	transport	P	"ATP synthase subunit a, plastid (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes2_c1140	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_c27615	protein amino acid phosphorylation	protein metabolism	P	Cyclin-dependent kinase 20 (EC 2.7.11.22) (Cell cycle-related kinase) (Cell division protein kinase 20)
ruditapes_c27615	phosphorylation	other metabolic processes	P	Cyclin-dependent kinase 20 (EC 2.7.11.22) (Cell cycle-related kinase) (Cell division protein kinase 20)
ruditapes_c27615	cell cycle	cell cycle and proliferation	P	Cyclin-dependent kinase 20 (EC 2.7.11.22) (Cell cycle-related kinase) (Cell division protein kinase 20)
ruditapes_c27615	cell division	other biological processes	P	Cyclin-dependent kinase 20 (EC 2.7.11.22) (Cell cycle-related kinase) (Cell division protein kinase 20)
ruditapes_c27615	multicellular organismal development	developmental processes	P	Cyclin-dependent kinase 20 (EC 2.7.11.22) (Cell cycle-related kinase) (Cell division protein kinase 20)
ruditapes_c27615	cilium morphogenesis	cell organization and biogenesis	P	Cyclin-dependent kinase 20 (EC 2.7.11.22) (Cell cycle-related kinase) (Cell division protein kinase 20)
ruditapes_c22834	multicellular organismal development	developmental processes	P	Homeobox protein unc-62 (Uncoordinated protein 62)
ruditapes_c22834	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein unc-62 (Uncoordinated protein 62)
ruditapes2_c534	oxidation reduction	other metabolic processes	P	Peroxidasin homolog (EC 1.11.1.7)
ruditapes2_c534	hydrogen peroxide catabolic process	stress response	P	Peroxidasin homolog (EC 1.11.1.7)
ruditapes2_c534	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidasin homolog (EC 1.11.1.7)
ruditapes2_c534	response to oxidative stress	stress response	P	Peroxidasin homolog (EC 1.11.1.7)
ruditapes_c23361	signal transduction	signal transduction	P	GTPase-activating protein rrc-1 (RhoGAP for Rac-1 and Cdc-42)
ruditapes_c23361	positive regulation of GTPase activity	other biological processes	P	GTPase-activating protein rrc-1 (RhoGAP for Rac-1 and Cdc-42)
ruditapes_lrc17761	signal transduction	signal transduction	P	GTPase-activating protein rrc-1 (RhoGAP for Rac-1 and Cdc-42)
ruditapes_lrc17761	positive regulation of GTPase activity	other biological processes	P	GTPase-activating protein rrc-1 (RhoGAP for Rac-1 and Cdc-42)
ruditapes_c18728	oxidation reduction	other metabolic processes	P	D-aspartate oxidase 1 (DASOX 1) (DDO 1) (EC 1.4.3.1)
ruditapes_c13778	segment polarity determination	developmental processes	P	Probable protein-cysteine N-palmitoyltransferase porcupine (EC 2.3.1.-) (More of ms protein 1)
ruditapes_c13778	Wnt receptor signaling pathway	signal transduction	P	Probable protein-cysteine N-palmitoyltransferase porcupine (EC 2.3.1.-) (More of ms protein 1)
ruditapes_c13778	multicellular organismal development	developmental processes	P	Probable protein-cysteine N-palmitoyltransferase porcupine (EC 2.3.1.-) (More of ms protein 1)
ruditapes_c25086	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase kinase kinase dlk-1 (EC 2.7.11.25) (DAP kinase-like kinase) (Death-associated protein kinase-like kinase)
ruditapes_c25086	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase kinase kinase dlk-1 (EC 2.7.11.25) (DAP kinase-like kinase) (Death-associated protein kinase-like kinase)
ruditapes_c30811	multicellular organismal development	developmental processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c30811	regulation of embryonic development	developmental processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c30811	negative regulation of transcription factor activity	RNA metabolism	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c30811	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c30811	endoderm development	developmental processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c30811	"transcription, DNA-dependent"	RNA metabolism	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c30811	Wnt receptor signaling pathway	signal transduction	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c3034	oxidation reduction	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes_c3034	transport	transport	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes_c3034	electron transport chain	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes_c20776	mRNA processing	RNA metabolism	P	Probable cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit) (CPSF 100 kDa subunit)
ruditapes_c15308	multicellular organismal development	developmental processes	P	Chondroitin proteoglycan 2
ruditapes_c15308	cell division	other biological processes	P	Chondroitin proteoglycan 2
ruditapes_c15308	cell cycle	cell cycle and proliferation	P	Chondroitin proteoglycan 2
ruditapes_c15308	embryonic development	developmental processes	P	Chondroitin proteoglycan 2
ruditapes_c15308	cytokinesis after mitosis	cell cycle and proliferation	P	Chondroitin proteoglycan 2
ruditapes_c15308	chitin metabolic process	other metabolic processes	P	Chondroitin proteoglycan 2
ruditapes_lrc36108	negative regulation of catalytic activity	other biological processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes2_lrc3441	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_lrc34619	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_lrc11314	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_lrc34765	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_lrc37438	negative regulation of catalytic activity	other biological processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes2_lrc3441	negative regulation of catalytic activity	other biological processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes2_lrc3289	negative regulation of catalytic activity	other biological processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_lrc37438	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes2_lrc3792	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_c3815	negative regulation of catalytic activity	other biological processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_lrc11314	negative regulation of catalytic activity	other biological processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes2_lrc3289	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes2_lrc3792	negative regulation of catalytic activity	other biological processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_c3815	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_lrc34619	negative regulation of catalytic activity	other biological processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_lrc36108	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_lrc34765	negative regulation of catalytic activity	other biological processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_c18264	programmed cell death	death	P	Cell death abnormality protein 8
ruditapes_c18264	DNA catabolic process	DNA metabolism	P	Cell death abnormality protein 8
ruditapes_c18264	apoptosis	death	P	Cell death abnormality protein 8
ruditapes_c18264	embryonic development	developmental processes	P	Cell death abnormality protein 8
ruditapes2_lrc4126	cell differentiation	other biological processes	P	C-mannosyltransferase dpy-19 (EC 2.4.1.-) (Protein dumpy-19)
ruditapes_lrc38069	multicellular organismal development	developmental processes	P	C-mannosyltransferase dpy-19 (EC 2.4.1.-) (Protein dumpy-19)
ruditapes_lrc38069	nervous system development	developmental processes	P	C-mannosyltransferase dpy-19 (EC 2.4.1.-) (Protein dumpy-19)
ruditapes2_lrc4126	multicellular organismal development	developmental processes	P	C-mannosyltransferase dpy-19 (EC 2.4.1.-) (Protein dumpy-19)
ruditapes_lrc38069	cell differentiation	other biological processes	P	C-mannosyltransferase dpy-19 (EC 2.4.1.-) (Protein dumpy-19)
ruditapes2_lrc4126	nervous system development	developmental processes	P	C-mannosyltransferase dpy-19 (EC 2.4.1.-) (Protein dumpy-19)
ruditapes_lrc20698	translation	protein metabolism	P	Elongation factor Ts (EF-Ts)
ruditapes_lrc20698	translational elongation	protein metabolism	P	Elongation factor Ts (EF-Ts)
ruditapes_c14432	GTP catabolic process	other metabolic processes	P	Putative ribosome biogenesis GTPase RsgA (EC 3.6.1.-)
ruditapes_c28035	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes_c28035	gluconeogenesis	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes_c7069	cell cycle	cell cycle and proliferation	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c7069	cell division	other biological processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c7069	regulation of cell shape	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c7069	peptidoglycan biosynthetic process	other metabolic processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c7069	cell wall organization	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c12250	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase)
ruditapes_c1741	RNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase)
ruditapes_c1741	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase)
ruditapes_c1741	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase)
ruditapes_c22059	cellular amino acid biosynthetic process	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c22059	phosphorylation	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c22059	aromatic amino acid family biosynthetic process	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c23903	metabolic process	other metabolic processes	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c23903	DNA replication	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c23903	DNA catabolic process	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_lrc11925	dUTP metabolic process	other metabolic processes	P	Probable deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_lrc11925	dUTP biosynthetic process	other metabolic processes	P	Probable deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_lrc11925	nucleotide metabolic process	other metabolic processes	P	Probable deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_c10133	translation	protein metabolism	P	O-phospho-L-seryl-tRNA:Cys-tRNA synthase (EC 2.5.1.73) (Sep-tRNA:Cys-tRNA synthase) (SepCysS)
ruditapes_c14865	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c14865	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c22767	polyphosphate biosynthetic process	other metabolic processes	P	Polyphosphate kinase (EC 2.7.4.1) (ATP-polyphosphate phosphotransferase) (Polyphosphoric acid kinase)
ruditapes_c22767	phosphorylation	other metabolic processes	P	Polyphosphate kinase (EC 2.7.4.1) (ATP-polyphosphate phosphotransferase) (Polyphosphoric acid kinase)
ruditapes2_c3341	fatty acid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes2_c3341	phospholipid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_lrc37615	coenzyme A biosynthetic process	other metabolic processes	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_lrc37615	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_lrc37615	phosphorylation	other metabolic processes	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_c4999	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c4999	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c4999	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c4999	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c4999	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c4999	metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c4999	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c4999	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c13830	D-amino acid catabolic process	other metabolic processes	P	D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)
ruditapes_c29156	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_c10368	cobalamin biosynthetic process	other metabolic processes	P	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (EC 2.4.2.21) (N(1)-alpha-phosphoribosyltransferase)
ruditapes_c10368	nucleoside biosynthetic process	other metabolic processes	P	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (EC 2.4.2.21) (N(1)-alpha-phosphoribosyltransferase)
ruditapes2_c2021	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_c2021	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_c2021	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c8195	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (Acyl-PO4 G3P acyltransferase) (Acyl-phosphate--glycerol-3-phosphate acyltransferase) (G3P acyltransferase) (GPAT) (EC 2.3.1.n3) (Lysophosphatidic acid synthase) (LPA synthase)
ruditapes_c22131	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimP
ruditapes_c8407	translation	protein metabolism	P	30S ribosomal protein S11
ruditapes_c31543	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c31543	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c31543	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c31543	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c31543	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c31543	translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c13893	SOS response	stress response	P	Protein RecA (Recombinase A)
ruditapes_c13893	DNA metabolic process	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c13893	DNA recombination	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c13893	response to DNA damage stimulus	stress response	P	Protein RecA (Recombinase A)
ruditapes_c13893	DNA repair	stress response	P	Protein RecA (Recombinase A)
ruditapes_c13893	DNA repair	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c2661	phosphorylation	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c2661	terpenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c2661	isoprenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c17684	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c17684	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c17684	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c17684	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c17684	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c17684	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c25315	aromatic amino acid family biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c25315	metabolic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c25315	cellular amino acid biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c25315	tryptophan biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c19794	ATP synthesis coupled proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c19794	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c19794	ATP biosynthetic process	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c19794	proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c19794	transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c19794	ion transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c22195	cell division	other biological processes	P	Cell division topological specificity factor
ruditapes_c22195	regulation of barrier septum formation	cell organization and biogenesis	P	Cell division topological specificity factor
ruditapes_c22195	cell cycle	cell cycle and proliferation	P	Cell division topological specificity factor
ruditapes_c15403	nitrogen compound metabolic process	other metabolic processes	P	Urease accessory protein UreD
ruditapes_c14939	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimP
ruditapes_c28150	protein amino acid methylation	protein metabolism	P	Release factor glutamine methyltransferase (RF MTase) (EC 2.1.1.n16) (N5-glutamine methyltransferase PrmC) (Protein-(glutamine-N5) MTase PrmC) (Protein-glutamine N-methyltransferase PrmC)
ruditapes_c28150	methylation	other metabolic processes	P	Release factor glutamine methyltransferase (RF MTase) (EC 2.1.1.n16) (N5-glutamine methyltransferase PrmC) (Protein-(glutamine-N5) MTase PrmC) (Protein-glutamine N-methyltransferase PrmC)
ruditapes_c14168	piRNA metabolic process	RNA metabolism	P	Tudor domain-containing protein 1
ruditapes_c14168	multicellular organismal development	developmental processes	P	Tudor domain-containing protein 1
ruditapes_c14168	germ cell development	other biological processes	P	Tudor domain-containing protein 1
ruditapes_c14168	cell differentiation	other biological processes	P	Tudor domain-containing protein 1
ruditapes_c14168	meiosis	cell cycle and proliferation	P	Tudor domain-containing protein 1
ruditapes_c14168	DNA methylation during gametogenesis	DNA metabolism	P	Tudor domain-containing protein 1
ruditapes_c14168	spermatogenesis	other biological processes	P	Tudor domain-containing protein 1
ruditapes_c14168	gene silencing by RNA	other metabolic processes	P	Tudor domain-containing protein 1
ruditapes_c8043	lysyl-tRNA aminoacylation	protein metabolism	P	"Probable lysine--tRNA ligase, cytoplasmic (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)"
ruditapes_c8043	lysyl-tRNA aminoacylation	RNA metabolism	P	"Probable lysine--tRNA ligase, cytoplasmic (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)"
ruditapes_c8043	translation	protein metabolism	P	"Probable lysine--tRNA ligase, cytoplasmic (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)"
ruditapes_c8043	tRNA aminoacylation for protein translation	protein metabolism	P	"Probable lysine--tRNA ligase, cytoplasmic (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)"
ruditapes_c8043	tRNA aminoacylation for protein translation	RNA metabolism	P	"Probable lysine--tRNA ligase, cytoplasmic (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)"
ruditapes2_c1891	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase 1 (EC 6.1.1.10) (Methionyl-tRNA synthetase 1) (MetRS 1)
ruditapes2_c1891	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase 1 (EC 6.1.1.10) (Methionyl-tRNA synthetase 1) (MetRS 1)
ruditapes2_c1891	translation	protein metabolism	P	Methionine--tRNA ligase 1 (EC 6.1.1.10) (Methionyl-tRNA synthetase 1) (MetRS 1)
ruditapes2_c1891	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase 1 (EC 6.1.1.10) (Methionyl-tRNA synthetase 1) (MetRS 1)
ruditapes2_c1891	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase 1 (EC 6.1.1.10) (Methionyl-tRNA synthetase 1) (MetRS 1)
ruditapes_c11091	tRNA processing	RNA metabolism	P	tRNA 2-thiocytidine biosynthesis protein TtcA
ruditapes_c25174	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c25174	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c25174	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c1639	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c1639	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes2_c1913	glutathione biosynthetic process	other metabolic processes	P	Carboxylate-amine ligase Bpet4705 (EC 6.3.-.-)
ruditapes2_c1658	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit H (EC 1.6.99.5) (NADH dehydrogenase I subunit H) (NDH-1 subunit H)
ruditapes2_c639	carbohydrate metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes2_c639	cellular metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes2_c2772	ATP catabolic process	other metabolic processes	P	ATP-dependent protease ATPase subunit HslU (Unfoldase HslU)
ruditapes2_c2772	response to stress	stress response	P	ATP-dependent protease ATPase subunit HslU (Unfoldase HslU)
ruditapes_c12611	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes_c11887	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c11887	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c11887	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c11887	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c11887	translation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c11887	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c442	tryptophan catabolic process	other metabolic processes	P	Kynurenine formamidase (KFA) (KFase) (EC 3.5.1.9) (Arylformamidase) (N-formylkynurenine formamidase) (FKF)
ruditapes_c442	anthranilate metabolic process	other metabolic processes	P	Kynurenine formamidase (KFA) (KFase) (EC 3.5.1.9) (Arylformamidase) (N-formylkynurenine formamidase) (FKF)
ruditapes_c442	tryptophan catabolic process to kynurenine	other metabolic processes	P	Kynurenine formamidase (KFA) (KFase) (EC 3.5.1.9) (Arylformamidase) (N-formylkynurenine formamidase) (FKF)
ruditapes_c12154	GTP metabolic process	other metabolic processes	P	Deoxyguanosinetriphosphate triphosphohydrolase-like protein
ruditapes_c20391	metabolic process	other metabolic processes	P	Acetyl-coenzyme A synthetase (AcCoA synthetase) (Acs) (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-activating enzyme)
ruditapes_c7603	cellular metabolic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c7603	methionine biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c7603	cellular amino acid biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c7603	cellular biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c7147	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c6741	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c6741	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c6741	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c6741	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c7147	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c7147	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c6741	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c6741	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c7147	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c7147	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c7147	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP) (Embryonic/Egg IAP) (EIAP/XLX)
ruditapes_c669	D-amino acid catabolic process	other metabolic processes	P	D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)
ruditapes_c13090	thiamin biosynthetic process	other metabolic processes	P	Probable tRNA sulfurtransferase (EC 2.8.1.4) (Sulfur carrier protein ThiS sulfurtransferase) (Thiamine biosynthesis protein ThiI) (tRNA 4-thiouridine synthase)
ruditapes_s37883	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Heat-inducible transcription repressor HrcA
ruditapes_s37883	response to stress	stress response	P	Heat-inducible transcription repressor HrcA
ruditapes_s37883	"transcription, DNA-dependent"	RNA metabolism	P	Heat-inducible transcription repressor HrcA
ruditapes_c5923	oxidation reduction	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c5923	metabolic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c5923	proline biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c5923	cellular amino acid biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_lrc15395	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (BPG-dependent PGAM) (PGAM) (Phosphoglyceromutase) (dPGM) (EC 5.4.2.1)"
ruditapes_lrc15395	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (BPG-dependent PGAM) (PGAM) (Phosphoglyceromutase) (dPGM) (EC 5.4.2.1)"
ruditapes_c18895	phosphorylation	other metabolic processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Selenium donor protein) (Selenophosphate synthase)"
ruditapes_c27071	protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c27071	transport	transport	P	Protein translocase subunit SecA
ruditapes_c27071	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes_c27071	protein import	transport	P	Protein translocase subunit SecA
ruditapes_c27071	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c27525	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase 2 (GluTR 2) (EC 1.2.1.70)
ruditapes_c27525	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase 2 (GluTR 2) (EC 1.2.1.70)
ruditapes_c27525	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase 2 (GluTR 2) (EC 1.2.1.70)
ruditapes_c13045	flagellum organization	cell organization and biogenesis	P	Flagellar assembly factor FliW
ruditapes_c13045	flagellum assembly	cell organization and biogenesis	P	Flagellar assembly factor FliW
ruditapes_c4888	proteolysis	protein metabolism	P	Peptidase E (EC 3.4.13.21) (Alpha-aspartyl dipeptidase) (Asp-specific dipeptidase) (Dipeptidase E)
ruditapes_c16348	social behavior	other biological processes	P	Pheromone-binding protein Gp-9 (PBP) (Putative odorant-binding protein Gp-9)
ruditapes_c16348	transport	transport	P	Pheromone-binding protein Gp-9 (PBP) (Putative odorant-binding protein Gp-9)
ruditapes_c16348	response to pheromone	other biological processes	P	Pheromone-binding protein Gp-9 (PBP) (Putative odorant-binding protein Gp-9)
ruditapes_c16348	behavior	other biological processes	P	Pheromone-binding protein Gp-9 (PBP) (Putative odorant-binding protein Gp-9)
ruditapes_c3886	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c3886	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c3886	cell division	other biological processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c3886	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c3886	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c3886	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c14554	oxidation reduction	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c14554	glycine betaine biosynthetic process from choline	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c14554	cellular alcohol metabolic process	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c28840	cellular process	other biological processes	P	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Proline dipeptidase) (Prolidase)
ruditapes_c28840	proteolysis	protein metabolism	P	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Proline dipeptidase) (Prolidase)
ruditapes_c21436	oxidation reduction	other metabolic processes	P	GMP reductase (EC 1.7.1.7) (Guanosine 5'-monophosphate oxidoreductase) (Guanosine monophosphate reductase)
ruditapes_c21436	nucleotide metabolic process	other metabolic processes	P	GMP reductase (EC 1.7.1.7) (Guanosine 5'-monophosphate oxidoreductase) (Guanosine monophosphate reductase)
ruditapes_c15775	oxidation reduction	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes_c15775	glycine metabolic process	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes_c8027	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c8027	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c8027	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c8027	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c8027	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c28852	metabolic process	other metabolic processes	P	Pseudouridine-5'-phosphate glycosidase (PsiMP glycosidase) (EC 3.2.-.-)
ruditapes_c25478	coenzyme A biosynthetic process	other metabolic processes	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_c25478	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_c25478	phosphorylation	other metabolic processes	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_c26874	translation	protein metabolism	P	Elongation factor P (EF-P)
ruditapes_c26874	translational elongation	protein metabolism	P	Elongation factor P (EF-P)
ruditapes_c26874	peptide biosynthetic process	other metabolic processes	P	Elongation factor P (EF-P)
ruditapes2_c2726	methylation	other metabolic processes	P	Protein VP3 [Includes: mRNA guanylyltransferase (EC 2.7.7.50); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56)]
ruditapes2_c2726	mRNA processing	RNA metabolism	P	Protein VP3 [Includes: mRNA guanylyltransferase (EC 2.7.7.50); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56)]
ruditapes2_c2726	mRNA capping	RNA metabolism	P	Protein VP3 [Includes: mRNA guanylyltransferase (EC 2.7.7.50); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56)]
ruditapes2_c2726	metabolic process	other metabolic processes	P	Protein VP3 [Includes: mRNA guanylyltransferase (EC 2.7.7.50); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56)]
ruditapes_c21718	negative regulation of peptidase activity	other biological processes	P	Serpin B10
ruditapes_c32028	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Retinoblastoma-related protein (MsRBR)
ruditapes_c32028	regulation of cell cycle	cell cycle and proliferation	P	Retinoblastoma-related protein (MsRBR)
ruditapes_c32028	cell cycle	cell cycle and proliferation	P	Retinoblastoma-related protein (MsRBR)
ruditapes_c32028	"transcription, DNA-dependent"	RNA metabolism	P	Retinoblastoma-related protein (MsRBR)
ruditapes_s35146	protein folding	protein metabolism	P	DnaJ homolog subfamily C member 22
ruditapes2_c2817	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35514	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c2969	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c5856	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc36921	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35514	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes2_c2817	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35319	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc36921	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35319	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35514	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc36921	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c5856	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35514	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes2_c2817	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes2_c3183	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes2_c2817	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes2_c3183	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes2_c3183	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c2969	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35319	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes2_c2817	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c2969	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c2969	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc36921	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c5856	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35319	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35319	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes2_c3183	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c5856	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc36921	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35514	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c2969	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc36921	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c5856	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c2969	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c5856	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35514	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes2_c2817	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_lrc35319	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes2_c3183	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes2_c3183	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-B (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B)
ruditapes_c7887	"transcription, DNA-dependent"	RNA metabolism	P	Prohibitin-2
ruditapes_c7887	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Prohibitin-2
ruditapes_c14084	mitosis	cell cycle and proliferation	P	Lissencephaly-1 homolog
ruditapes_c14084	mitosis	cell organization and biogenesis	P	Lissencephaly-1 homolog
ruditapes_c14084	transport	transport	P	Lissencephaly-1 homolog
ruditapes_c14084	cell division	other biological processes	P	Lissencephaly-1 homolog
ruditapes_c14084	cell cycle	cell cycle and proliferation	P	Lissencephaly-1 homolog
ruditapes_s34593	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulator MntR (Manganese transport regulator)
ruditapes_s34593	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulator MntR (Manganese transport regulator)
ruditapes_c21434	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c21434	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c21434	histidyl-tRNA aminoacylation	protein metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c21434	histidyl-tRNA aminoacylation	RNA metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c21434	tRNA aminoacylation for protein translation	protein metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c21434	tRNA aminoacylation for protein translation	RNA metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c10361	alanine biosynthetic process	other metabolic processes	P	Aspartate 1-decarboxylase (EC 4.1.1.11) (Aspartate alpha-decarboxylase) [Cleaved into: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain]
ruditapes_c10361	pantothenate biosynthetic process	other metabolic processes	P	Aspartate 1-decarboxylase (EC 4.1.1.11) (Aspartate alpha-decarboxylase) [Cleaved into: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain]
ruditapes_c18793	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c18793	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c18793	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c18793	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c18793	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c2151	response to redox state	other biological processes	P	Redox-sensing transcriptional repressor rex
ruditapes_c2151	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Redox-sensing transcriptional repressor rex
ruditapes_c2151	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Redox-sensing transcriptional repressor rex
ruditapes_c2151	"transcription, DNA-dependent"	RNA metabolism	P	Redox-sensing transcriptional repressor rex
ruditapes_c22162	translation	protein metabolism	P	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) (EC 6.3.5.-)
ruditapes_c22162	regulation of translational fidelity	protein metabolism	P	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) (EC 6.3.5.-)
ruditapes_c9766	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c9766	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c9766	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_lrc31620	menaquinone biosynthetic process	other metabolic processes	P	Demethylmenaquinone methyltransferase (EC 2.1.1.163) (Menaquinone biosynthesis methyltransferase ubiE)
ruditapes_lrc31620	methylation	other metabolic processes	P	Demethylmenaquinone methyltransferase (EC 2.1.1.163) (Menaquinone biosynthesis methyltransferase ubiE)
ruditapes_s37444	biological_process	other biological processes	P	"39S ribosomal protein L9, mitochondrial (L9mt) (MRP-L9)"
ruditapes2_c3204	biological_process	other biological processes	P	"39S ribosomal protein L9, mitochondrial (L9mt) (MRP-L9)"
ruditapes2_c3204	translation	protein metabolism	P	"39S ribosomal protein L9, mitochondrial (L9mt) (MRP-L9)"
ruditapes_s37444	translation	protein metabolism	P	"39S ribosomal protein L9, mitochondrial (L9mt) (MRP-L9)"
ruditapes_c34858	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c6262	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c3799	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c3799	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c34858	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c34858	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c6262	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c6262	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c3799	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c34858	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c3799	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c6262	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c6391	protein folding	protein metabolism	P	Prefoldin subunit 2
ruditapes_c5121	defense response to fungus	stress response	P	Coactosin-like protein
ruditapes2_c78	defense response to fungus	stress response	P	Coactosin-like protein
ruditapes_c26857	tRNA wobble uridine modification	RNA metabolism	P	tRNA (mo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c5550	methylation	other metabolic processes	P	tRNA (mo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c26857	methylation	other metabolic processes	P	tRNA (mo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c5550	tRNA wobble uridine modification	RNA metabolism	P	tRNA (mo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c21387	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c21387	lipid glycosylation	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c21387	cell division	other biological processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c21387	carbohydrate metabolic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c21387	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c21387	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c21387	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c21387	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c20986	cell division	other biological processes	P	Cell division protein FtsQ
ruditapes_c20986	cell cycle	cell cycle and proliferation	P	Cell division protein FtsQ
ruditapes_c28573	porphyrin biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c28573	heme biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c30325	tricarboxylic acid cycle	other metabolic processes	P	Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta) (SCS-beta)
ruditapes_c30325	metabolic process	other metabolic processes	P	Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta) (SCS-beta)
ruditapes2_lrc4465	oxidation reduction	other metabolic processes	P	NAD(P)H-quinone oxidoreductase subunit I (EC 1.6.5.-) (NAD(P)H dehydrogenase I subunit I) (NDH-1 subunit I) (NDH-I)
ruditapes_c22923	heme O biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_c22923	heme biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_c29093	queuosine biosynthetic process	RNA metabolism	P	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA)
ruditapes_c7504	translation	protein metabolism	P	50S ribosomal protein L15
ruditapes_c18860	transport	transport	P	Photosystem Q(B) protein 1 (EC 1.10.3.9) (32 kDa thylakoid membrane protein 1) (Photosystem II protein D1 1)
ruditapes_c18860	"photosynthesis, light reaction"	other metabolic processes	P	Photosystem Q(B) protein 1 (EC 1.10.3.9) (32 kDa thylakoid membrane protein 1) (Photosystem II protein D1 1)
ruditapes_c18860	photosynthetic electron transport in photosystem II	other metabolic processes	P	Photosystem Q(B) protein 1 (EC 1.10.3.9) (32 kDa thylakoid membrane protein 1) (Photosystem II protein D1 1)
ruditapes_c18860	photosynthesis	other metabolic processes	P	Photosystem Q(B) protein 1 (EC 1.10.3.9) (32 kDa thylakoid membrane protein 1) (Photosystem II protein D1 1)
ruditapes_c18860	response to herbicide	stress response	P	Photosystem Q(B) protein 1 (EC 1.10.3.9) (32 kDa thylakoid membrane protein 1) (Photosystem II protein D1 1)
ruditapes_c18860	electron transport chain	other metabolic processes	P	Photosystem Q(B) protein 1 (EC 1.10.3.9) (32 kDa thylakoid membrane protein 1) (Photosystem II protein D1 1)
ruditapes_c18860	oxidation reduction	other metabolic processes	P	Photosystem Q(B) protein 1 (EC 1.10.3.9) (32 kDa thylakoid membrane protein 1) (Photosystem II protein D1 1)
ruditapes_c629	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c629	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c26730	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c26730	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c26730	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c26730	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c26730	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c29337	ATP catabolic process	other metabolic processes	P	ATPase GET3 (EC 3.6.-.-) (Arsenical pump-driving ATPase) (Arsenite-stimulated ATPase) (Golgi to ER traffic protein 3) (Guided entry of tail-anchored proteins 3)
ruditapes_c29337	transport	transport	P	ATPase GET3 (EC 3.6.-.-) (Arsenical pump-driving ATPase) (Arsenite-stimulated ATPase) (Golgi to ER traffic protein 3) (Guided entry of tail-anchored proteins 3)
ruditapes_c23437	tRNA wobble uridine modification	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_c23437	tRNA thio-modification	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_c23437	tRNA processing	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_c30764	biological_process	other biological processes	P	WD repeat-containing protein on Y chromosome (WD40 Y)
ruditapes_c12940	metabolic process	other metabolic processes	P	Protein SAMHD1 homolog (EC 3.1.4.-) (HD phosphohydrolase domain-containing protein)
ruditapes_c28262	metabolic process	other metabolic processes	P	Protein SAMHD1 homolog (EC 3.1.4.-) (HD phosphohydrolase domain-containing protein)
ruditapes_c8921	autophagy	other metabolic processes	P	Probable autophagy-related protein 17
ruditapes_lrc38654	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 28 (dipks28) (EC 2.3.1.-)
ruditapes_lrc38654	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 28 (dipks28) (EC 2.3.1.-)
ruditapes_lrc38654	metabolic process	other metabolic processes	P	Probable polyketide synthase 28 (dipks28) (EC 2.3.1.-)
ruditapes_c9510	translation	protein metabolism	P	50S ribosomal protein L6
ruditapes_s37148	RNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_s37148	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_s37148	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_s37148	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes2_c1066	cell cycle	cell cycle and proliferation	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes2_c1066	protein folding	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes2_c1066	protein peptidyl-prolyl isomerization	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes2_c1066	cell division	other biological processes	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes2_c1066	protein transport	transport	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes2_c257	queuosine biosynthetic process	RNA metabolism	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes2_c257	oxidation reduction	other metabolic processes	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c14830	protein-phycocyanobilin linkage	protein metabolism	P	Chromophore lyase CpcT/CpeT 1 (EC 4.-.-.-)
ruditapes_s40467	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)
ruditapes_s40467	'de novo' IMP biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)
ruditapes_c25477	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes2_c2313	"transcription, DNA-dependent"	RNA metabolism	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	chromatin modification	cell organization and biogenesis	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	response to DNA damage stimulus	stress response	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	methylation	other metabolic processes	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	histone H3-R2 methylation	protein metabolism	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	histone H3-R2 methylation	cell organization and biogenesis	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	histone H4-R3 methylation	protein metabolism	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	histone H4-R3 methylation	cell organization and biogenesis	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	histone arginine methylation	protein metabolism	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	histone arginine methylation	cell organization and biogenesis	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	DNA repair	stress response	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	DNA repair	DNA metabolism	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c2313	"peptidyl-arginine methylation, to asymmetrical-dimethyl arginine"	protein metabolism	P	Protein arginine N-methyltransferase 6 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT6) (EC 2.1.1.125)
ruditapes2_c1931	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA 1 (EC 2.8.1.-)
ruditapes_c3707	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c3707	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c3707	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c3707	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c13828	metabolic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes_c13828	histidine biosynthetic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes_c13828	cellular amino acid biosynthetic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes_c8120	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative sporulation transcription regulator WhiA
ruditapes_c8120	"transcription, DNA-dependent"	RNA metabolism	P	Putative sporulation transcription regulator WhiA
ruditapes_c16650	histidyl-tRNA aminoacylation	protein metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c16650	histidyl-tRNA aminoacylation	RNA metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c16650	tRNA aminoacylation for protein translation	protein metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c16650	tRNA aminoacylation for protein translation	RNA metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c16650	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c16650	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c29157	response to stress	stress response	P	ATP-dependent protease ATPase subunit HslU (Unfoldase HslU)
ruditapes_c29157	ATP catabolic process	other metabolic processes	P	ATP-dependent protease ATPase subunit HslU (Unfoldase HslU)
ruditapes_c26138	ubiquinone biosynthetic process	other metabolic processes	P	Probable ubiquinone biosynthesis protein UbiB
ruditapes_c12595	rRNA catabolic process	RNA metabolism	P	Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)
ruditapes_c12595	RNA processing	RNA metabolism	P	Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)
ruditapes_c24822	ATP catabolic process	other metabolic processes	P	von Willebrand factor A domain-containing protein 8
ruditapes_c2257	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative HTH-type transcriptional regulatory protein OE
ruditapes_c2257	"transcription, DNA-dependent"	RNA metabolism	P	Putative HTH-type transcriptional regulatory protein OE
ruditapes_c30186	translation	protein metabolism	P	50S ribosomal protein L28
ruditapes_c22637	DNA catabolic process	DNA metabolism	P	Exodeoxyribonuclease 7 large subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit)
ruditapes_c7315	isoprenoid biosynthetic process	other metabolic processes	P	Isopentenyl-diphosphate Delta-isomerase (IPP isomerase) (EC 5.3.3.2) (IPP:DMAPP isomerase) (Isopentenyl pyrophosphate isomerase)
ruditapes_c5528	pyridoxine biosynthetic process	other metabolic processes	P	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase)
ruditapes_c5528	oxidation reduction	other metabolic processes	P	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase)
ruditapes_c16211	translation	protein metabolism	P	50S ribosomal protein L16
ruditapes_c18551	arginine biosynthetic process	other metabolic processes	P	Arginine repressor
ruditapes_c18551	protein oligomerization	cell organization and biogenesis	P	Arginine repressor
ruditapes_c18551	cellular amino acid biosynthetic process	other metabolic processes	P	Arginine repressor
ruditapes_c18551	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Arginine repressor
ruditapes_c18551	"transcription, DNA-dependent"	RNA metabolism	P	Arginine repressor
ruditapes_c18551	arginine metabolic process	other metabolic processes	P	Arginine repressor
ruditapes_c30750	translation	protein metabolism	P	30S ribosomal protein S6
ruditapes_c31907	response to stress	stress response	P	Lon protease (EC 3.4.21.53) (ATP-dependent protease La)
ruditapes_c31907	proteolysis	protein metabolism	P	Lon protease (EC 3.4.21.53) (ATP-dependent protease La)
ruditapes_c5427	motor axon guidance	developmental processes	P	Plexin A3
ruditapes_c5427	motor axon guidance	cell organization and biogenesis	P	Plexin A3
ruditapes_c5427	branching morphogenesis of a nerve	developmental processes	P	Plexin A3
ruditapes_c5427	axon extension	developmental processes	P	Plexin A3
ruditapes_c5427	axon extension	cell organization and biogenesis	P	Plexin A3
ruditapes_c5427	signal transduction	signal transduction	P	Plexin A3
ruditapes_c5427	multicellular organismal development	developmental processes	P	Plexin A3
ruditapes_c16931	tRNA processing	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c16931	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c16931	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c16931	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c30305	histidine biosynthetic process	other metabolic processes	P	Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)
ruditapes_c30305	cellular amino acid biosynthetic process	other metabolic processes	P	Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)
ruditapes_c18321	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c18321	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c12210	mRNA catabolic process	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes_c12210	RNA processing	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes_c10869	translational termination	protein metabolism	P	Peptide chain release factor 1 (RF-1)
ruditapes_c10869	translational termination	cell organization and biogenesis	P	Peptide chain release factor 1 (RF-1)
ruditapes_c10869	translation	protein metabolism	P	Peptide chain release factor 1 (RF-1)
ruditapes_c8100	arginine biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c8100	oxidation reduction	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c8100	cellular amino acid biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c8100	cellular amino acid metabolic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c11158	tRNA seleno-modification	RNA metabolism	P	tRNA 2-selenouridine synthase (EC 2.9.1.-) (Selenophosphate-dependent tRNA 2-selenouridine synthase)
ruditapes_c7836	heme O biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_c7836	heme biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase)
ruditapes_c18360	pantothenate biosynthetic process	other metabolic processes	P	Pantothenate synthetase (PS) (EC 6.3.2.1) (Pantoate--beta-alanine ligase) (Pantoate-activating enzyme)
ruditapes_c18360	biosynthetic process	other metabolic processes	P	Pantothenate synthetase (PS) (EC 6.3.2.1) (Pantoate--beta-alanine ligase) (Pantoate-activating enzyme)
ruditapes_c23532	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c23532	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c23532	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c23532	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c23532	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c23532	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c33590	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase J (EC 2.1.1.242) (16S rRNA m2G1516 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase)
ruditapes_c33590	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase J (EC 2.1.1.242) (16S rRNA m2G1516 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase)
ruditapes_c9835	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
ruditapes_c17693	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c17693	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c17693	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c18981	translation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c18981	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c18981	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c18981	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c18981	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c18981	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c14286	copper ion homeostasis	other biological processes	P	Copper homeostasis protein CutC
ruditapes_c10221	rRNA methylation	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c13510	rRNA processing	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c13510	rRNA methylation	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c10221	rRNA processing	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c10221	rRNA modification	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c10221	methylation	other metabolic processes	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c13510	methylation	other metabolic processes	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c13510	rRNA modification	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c30120	cellular metabolic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes_c30120	terpenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes_c30120	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes_c30120	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes_c21766	cell division	other biological processes	P	Probable intracellular septation protein A
ruditapes_c21766	barrier septum formation	cell organization and biogenesis	P	Probable intracellular septation protein A
ruditapes_c21766	cell cycle	cell cycle and proliferation	P	Probable intracellular septation protein A
ruditapes_c16347	chromosome condensation	cell organization and biogenesis	P	Chromosome partition protein MukE
ruditapes_c16347	cell division	other biological processes	P	Chromosome partition protein MukE
ruditapes_c16347	cell cycle	cell cycle and proliferation	P	Chromosome partition protein MukE
ruditapes_c16347	chromosome segregation	other biological processes	P	Chromosome partition protein MukE
ruditapes_lrc32892	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Cyclic pyranopterin monophosphate synthase accessory protein (Molybdenum cofactor biosynthesis protein C)
ruditapes_lrc32237	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Cyclic pyranopterin monophosphate synthase accessory protein (Molybdenum cofactor biosynthesis protein C)
ruditapes_c15494	DNA recombination	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c15494	response to DNA damage stimulus	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c15494	DNA repair	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c15494	DNA repair	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c15494	SOS response	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c23181	ER-associated protein catabolic process	protein metabolism	P	FAD-dependent oxidoreductase domain-containing protein 2
ruditapes_c23181	oxidation reduction	other metabolic processes	P	FAD-dependent oxidoreductase domain-containing protein 2
ruditapes_s33621	oxidation reduction	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_s33621	cellular amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_s36268	branched chain family amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_s36268	cellular amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_s36268	oxidation reduction	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_s33621	branched chain family amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c94	dUTP metabolic process	other metabolic processes	P	Deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_c94	nucleotide metabolic process	other metabolic processes	P	Deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_c94	dUTP biosynthetic process	other metabolic processes	P	Deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_c11754	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c11754	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c9160	RNA processing	RNA metabolism	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c9160	RNA methylation	RNA metabolism	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c9160	rRNA processing	RNA metabolism	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c9160	methylation	other metabolic processes	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c26949	methylation	other metabolic processes	P	Ribosomal protein L11 methyltransferase (L11 Mtase) (EC 2.1.1.-)
ruditapes_c26949	protein amino acid methylation	protein metabolism	P	Ribosomal protein L11 methyltransferase (L11 Mtase) (EC 2.1.1.-)
ruditapes_c12316	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Protein SMG8 (Protein smg-8 homolog)
ruditapes_c16026	carbohydrate metabolic process	other metabolic processes	P	"1,3-beta-glucanosyltransferase gel3 (EC 2.4.1.-) (Glucan elongating glucanosyltransferase 3)"
ruditapes_c23250	biological_process	other biological processes	P	"CDGSH iron-sulfur domain-containing protein 3, mitochondrial (Melanoma nuclear protein 13)"
ruditapes_c21682	biological_process	other biological processes	P	Monocarboxylate transporter 7 (MCT 7) (Monocarboxylate transporter 6) (MCT 6) (Solute carrier family 16 member 6)
ruditapes_c21682	transmembrane transport	transport	P	Monocarboxylate transporter 7 (MCT 7) (Monocarboxylate transporter 6) (MCT 6) (Solute carrier family 16 member 6)
ruditapes_c19680	isoprenoid biosynthetic process	other metabolic processes	P	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT)
ruditapes_c21683	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2)
ruditapes_c21683	lipid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2)
ruditapes_c26628	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c26628	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c3638	histidine biosynthetic process	other metabolic processes	P	Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)
ruditapes_c3638	cellular amino acid biosynthetic process	other metabolic processes	P	Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)
ruditapes_c17641	rRNA processing	RNA metabolism	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_c17641	ribosome biogenesis	other biological processes	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_lrc35396	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc35396	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_s38787	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc35396	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_s37123	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc32246	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_s37123	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc32246	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc32246	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc20469	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_s38787	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_s38787	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_s37123	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc20469	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc20469	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc19085	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc19085	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc19085	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes2_c86	L-phenylalanine biosynthetic process	other metabolic processes	P	UPF0735 ACT domain-containing protein Bsph
ruditapes2_c86	metabolic process	other metabolic processes	P	UPF0735 ACT domain-containing protein Bsph
ruditapes_c20545	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c20545	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c20545	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c21627	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c21627	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c21627	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c21627	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c21627	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c21627	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c30265	translation	protein metabolism	P	30S ribosomal protein S14 type Z
ruditapes_c23935	regulation of DNA repair	stress response	P	Regulatory protein RecX
ruditapes_c23935	regulation of DNA repair	DNA metabolism	P	Regulatory protein RecX
ruditapes_c13406	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Putative competence-damage inducible protein
ruditapes_c5497	protein folding	protein metabolism	P	Foldase protein PrsA (EC 5.2.1.8)
ruditapes_c5497	protein peptidyl-prolyl isomerization	protein metabolism	P	Foldase protein PrsA (EC 5.2.1.8)
ruditapes_c5497	protein transport	transport	P	Foldase protein PrsA (EC 5.2.1.8)
ruditapes_c9328	nucleotide metabolic process	other metabolic processes	P	Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
ruditapes_c9328	purine ribonucleoside monophosphate biosynthetic process	other metabolic processes	P	Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
ruditapes_c20744	histidyl-tRNA aminoacylation	protein metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c20744	histidyl-tRNA aminoacylation	RNA metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c20744	tRNA aminoacylation for protein translation	protein metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c20744	tRNA aminoacylation for protein translation	RNA metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c20744	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c20744	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c6799	translation	protein metabolism	P	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase)
ruditapes_c6799	selenocysteine incorporation	protein metabolism	P	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase)
ruditapes2_c1980	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes2_c1980	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c25762	metabolic process	other metabolic processes	P	Oxaloacetate decarboxylase 1 (EC 4.1.1.3)
ruditapes_c19239	mismatch repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c19239	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c19239	DNA repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c19239	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c19239	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutL
ruditapes_c27872	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Cyclic pyranopterin monophosphate synthase (EC 4.1.99.18) (Molybdenum cofactor biosynthesis protein A)
ruditapes_c29344	tRNA seleno-modification	RNA metabolism	P	tRNA 2-selenouridine synthase (EC 2.9.1.-) (Selenophosphate-dependent tRNA 2-selenouridine synthase)
ruditapes2_c123	proteolysis	protein metabolism	P	Protease HtpX (EC 3.4.24.-) (Heat shock protein HtpX)
ruditapes_c18827	cellular metabolic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c18827	biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c18827	response to antibiotic	other biological processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c18827	lipid A biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c18827	methylation	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c18827	lipopolysaccharide biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c18827	oxidation reduction	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c18827	lipid biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c18827	metabolic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c24160	phosphorylation	other metabolic processes	P	"Putative phosphoenolpyruvate synthase regulatory protein (PEP synthase regulatory protein) (PSRP) (EC 2.7.11.-) (EC 2.7.4.-) (Pyruvate, water dikinase regulatory protein)"
ruditapes_c10028	protein catabolic process	protein metabolism	P	ATP-dependent Clp protease adapter protein ClpS
ruditapes_c18902	GTP metabolic process	other metabolic processes	P	Deoxyguanosinetriphosphate triphosphohydrolase-like protein
ruditapes_c17069	metabolic process	other metabolic processes	P	Succinylglutamate desuccinylase (EC 3.5.1.96)
ruditapes_c17069	arginine catabolic process to glutamate	other metabolic processes	P	Succinylglutamate desuccinylase (EC 3.5.1.96)
ruditapes_c17069	arginine metabolic process	other metabolic processes	P	Succinylglutamate desuccinylase (EC 3.5.1.96)
ruditapes_c24553	"pentose-phosphate shunt, non-oxidative branch"	other metabolic processes	P	Ribose-5-phosphate isomerase A (EC 5.3.1.6) (Phosphoriboisomerase A) (PRI)
ruditapes_c25538	purine ribonucleoside monophosphate biosynthetic process	other metabolic processes	P	Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
ruditapes_c25538	nucleotide metabolic process	other metabolic processes	P	Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
ruditapes2_c1012	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_lrc6855	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes2_c1012	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_lrc6855	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_lrc6855	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes2_c1012	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_lrc6855	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes2_c1012	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c1974	tRNA processing	RNA metabolism	P	tRNA(Ile)-lysidine synthase (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase)
ruditapes_c13231	rRNA methylation	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c13231	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c13231	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c25639	tRNA processing	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c25639	tRNA wobble uridine modification	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c21066	dUTP metabolic process	other metabolic processes	P	Probable deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_c21066	dUTP biosynthetic process	other metabolic processes	P	Probable deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_c21066	nucleotide metabolic process	other metabolic processes	P	Probable deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_c31180	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c31180	translation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c31180	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c31180	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c31180	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c31180	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase 2 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 2) (GluRS 2)
ruditapes_c10664	rRNA processing	RNA metabolism	P	Ribosome-binding factor A
ruditapes_c12947	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes_c12947	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes_c12947	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes_c12947	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes_c20609	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.181) (23S rRNA mA1618 methyltransferase) (rRNA adenine N-6-methyltransferase)
ruditapes_c20609	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.181) (23S rRNA mA1618 methyltransferase) (rRNA adenine N-6-methyltransferase)
ruditapes_c27704	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c27704	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c13069	tetrahydrobiopterin biosynthetic process	other metabolic processes	P	Putative pterin-4-alpha-carbinolamine dehydratase (PHS) (EC 4.2.1.96) (4-alpha-hydroxy-tetrahydropterin dehydratase) (Pterin carbinolamine dehydratase) (PCD)
ruditapes_c18374	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c18374	protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c18374	protein import	transport	P	Protein translocase subunit SecA
ruditapes_c18374	transport	transport	P	Protein translocase subunit SecA
ruditapes_c18374	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes_c25589	glycolysis	other metabolic processes	P	Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI)
ruditapes_c25589	gluconeogenesis	other metabolic processes	P	Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI)
ruditapes_c4584	oxidation reduction	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c4584	cellular amino acid biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c4584	metabolic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c4584	proline biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c705	tRNA aminoacylation for protein translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c705	tRNA aminoacylation for protein translation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c705	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c705	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c705	translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c705	tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c25320	translation	protein metabolism	P	30S ribosomal protein S2
ruditapes_c23198	response to DNA damage stimulus	stress response	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease RexB)
ruditapes_c23198	DNA repair	stress response	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease RexB)
ruditapes_c23198	DNA repair	DNA metabolism	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease RexB)
ruditapes_c30489	translation	protein metabolism	P	"50S ribosomal protein L33, chloroplastic"
ruditapes_c9380	regulation of signal transduction	signal transduction	P	Neurotoxin Nv1-116.40.1 (Neurotoxin Nv1-14) (Neurotoxin Nv1-9)
ruditapes_s34044	pathogenesis	other biological processes	P	U24-theraphotoxin-Cj1a (U24-TRTX-Cj1a) (Jingzhaotoxin-27) (JZTX-27) (Peptide F2-36.12)
ruditapes_c13271	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c13271	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c13271	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c13271	tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c13271	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c13271	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c16134	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c16134	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c16134	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c16134	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c16134	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes2_c169	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes2_c169	transport	transport	P	Protein translocase subunit SecA
ruditapes2_c169	protein transport	transport	P	Protein translocase subunit SecA
ruditapes2_c169	protein import	transport	P	Protein translocase subunit SecA
ruditapes2_c169	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c15544	ribosome biogenesis	other biological processes	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_c15544	rRNA processing	RNA metabolism	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_c3750	translation	protein metabolism	P	"30S ribosomal protein S11, chloroplastic"
ruditapes_c3915	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c3915	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c3915	transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c3915	proton transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c2844	ion transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c3915	ion transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c2844	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c2844	transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c2844	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c2844	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c3915	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c2844	proton transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_c25388	oxidation reduction	other metabolic processes	P	Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)
ruditapes_c25388	protein metabolic process	protein metabolism	P	Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)
ruditapes_c19047	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c19047	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c19047	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c19047	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c19047	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c19047	metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c19047	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c19047	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c12500	phospholipid catabolic process	other metabolic processes	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c12500	metabolic process	other metabolic processes	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c12500	lipid catabolic process	other metabolic processes	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c7202	cytochrome complex assembly	cell organization and biogenesis	P	Cytochrome c biogenesis protein CcsA
ruditapes_c7202	protein complex assembly	cell organization and biogenesis	P	Cytochrome c biogenesis protein CcsA
ruditapes_c7202	respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c biogenesis protein CcsA
ruditapes_c2555	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c2555	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c2555	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c2555	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c2555	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c20307	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c20307	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c20307	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c20307	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c20307	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c22598	oxidation reduction	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 6, organellar chromatophore (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 6) (NADH-plastoquinone oxidoreductase subunit 6)"
ruditapes_c22598	transport	transport	P	"NAD(P)H-quinone oxidoreductase subunit 6, organellar chromatophore (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 6) (NADH-plastoquinone oxidoreductase subunit 6)"
ruditapes_c4674	ATP synthesis coupled electron transport	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, organellar chromatophore 2 (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5 2) (NADH-plastoquinone oxidoreductase subunit 5 2)"
ruditapes_c4674	transport	transport	P	"NAD(P)H-quinone oxidoreductase subunit 5, organellar chromatophore 2 (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5 2) (NADH-plastoquinone oxidoreductase subunit 5 2)"
ruditapes_c4674	oxidation reduction	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, organellar chromatophore 2 (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5 2) (NADH-plastoquinone oxidoreductase subunit 5 2)"
ruditapes_c16030	pyrimidine base biosynthetic process	other metabolic processes	P	Dihydroorotase (DHOase) (EC 3.5.2.3)
ruditapes_c16030	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Dihydroorotase (DHOase) (EC 3.5.2.3)
ruditapes_c6228	translation	protein metabolism	P	30S ribosomal protein S14
ruditapes_c5185	cellular amino acid biosynthetic process	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes_c5185	phosphorylation	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes_c5185	proline biosynthetic process	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes2_lrc6835	translation	protein metabolism	P	50S ribosomal protein L3
ruditapes_c18244	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c18244	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c18244	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c18244	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c18244	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c5731	peptidoglycan biosynthetic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c5731	alanine metabolic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c5731	cell wall organization	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c5731	regulation of cell shape	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c22835	DNA repair	stress response	P	Flap endonuclease 1 (FEN-1) (EC 3.1.-.-) (Flap structure-specific endonuclease 1)
ruditapes_c22835	DNA repair	DNA metabolism	P	Flap endonuclease 1 (FEN-1) (EC 3.1.-.-) (Flap structure-specific endonuclease 1)
ruditapes_c22835	response to DNA damage stimulus	stress response	P	Flap endonuclease 1 (FEN-1) (EC 3.1.-.-) (Flap structure-specific endonuclease 1)
ruditapes_c22835	DNA replication	DNA metabolism	P	Flap endonuclease 1 (FEN-1) (EC 3.1.-.-) (Flap structure-specific endonuclease 1)
ruditapes_c25975	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_c20792	translation	protein metabolism	P	50S ribosomal protein L9
ruditapes_c19711	oxidation reduction	other metabolic processes	P	Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
ruditapes_c19711	metabolic process	other metabolic processes	P	Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
ruditapes_c5920	methylation	other metabolic processes	P	Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO (EC 2.1.1.74) (Folate-dependent tRNA (uracil-5-)-methyltransferase) (Folate-dependent tRNA(M-5-U54)-methyltransferase)
ruditapes_c5920	tRNA processing	RNA metabolism	P	Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO (EC 2.1.1.74) (Folate-dependent tRNA (uracil-5-)-methyltransferase) (Folate-dependent tRNA(M-5-U54)-methyltransferase)
ruditapes_c26445	glycogen biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_c26445	glucan biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_c26445	biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_s36599	translation	protein metabolism	P	30S ribosomal protein S2
ruditapes_c16495	glucuronate catabolic process	other metabolic processes	P	Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase) (Uronic isomerase)
ruditapes_c7964	transport	transport	P	NADH-quinone oxidoreductase subunit N 1 (EC 1.6.99.5) (NADH dehydrogenase I subunit N 1) (NDH-1 subunit N 1)
ruditapes_c7964	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit N 1 (EC 1.6.99.5) (NADH dehydrogenase I subunit N 1) (NDH-1 subunit N 1)
ruditapes_c7964	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-quinone oxidoreductase subunit N 1 (EC 1.6.99.5) (NADH dehydrogenase I subunit N 1) (NDH-1 subunit N 1)
ruditapes_c9579	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c9579	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c9579	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c16008	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes_c12391	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c12391	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c27523	mRNA catabolic process	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes_c27523	RNA processing	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes_c17369	cytochrome complex assembly	cell organization and biogenesis	P	Cytochrome c-type biogenesis protein CcmE (Cytochrome c maturation protein E) (Heme chaperone CcmE)
ruditapes_c17369	protein-heme linkage	protein metabolism	P	Cytochrome c-type biogenesis protein CcmE (Cytochrome c maturation protein E) (Heme chaperone CcmE)
ruditapes2_c2325	translation	protein metabolism	P	50S ribosomal protein L28
ruditapes2_c1654	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_c1654	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_c1654	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c10249	metabolic process	other metabolic processes	P	ATP-dependent protease subunit HslV (EC 3.4.25.2)
ruditapes_c10249	proteolysis involved in cellular protein catabolic process	protein metabolism	P	ATP-dependent protease subunit HslV (EC 3.4.25.2)
ruditapes_c10249	response to stress	stress response	P	ATP-dependent protease subunit HslV (EC 3.4.25.2)
ruditapes_c10249	proteolysis	protein metabolism	P	ATP-dependent protease subunit HslV (EC 3.4.25.2)
ruditapes2_c31	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes2_c31	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c31142	thiamin biosynthetic process	other metabolic processes	P	Thiamine-phosphate synthase (TP synthase) (TPS) (EC 2.5.1.3) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
ruditapes_c26635	regulation of cell shape	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c26635	peptidoglycan biosynthetic process	other metabolic processes	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c26635	cell wall organization	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c1451	barrier septum formation	cell organization and biogenesis	P	Probable GTP-binding protein EngB
ruditapes_c1451	cell cycle	cell cycle and proliferation	P	Probable GTP-binding protein EngB
ruditapes_c1451	cell division	other biological processes	P	Probable GTP-binding protein EngB
ruditapes_lrc22140	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc22140	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc22140	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc22140	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc22140	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c13460	isoprenoid biosynthetic process	other metabolic processes	P	Isopentenyl-diphosphate Delta-isomerase (IPP isomerase) (EC 5.3.3.2) (IPP:DMAPP isomerase) (Isopentenyl pyrophosphate isomerase)
ruditapes_s36821	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_s36821	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_s36821	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_s36821	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_s36821	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_s36821	translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c12517	rRNA processing	RNA metabolism	P	Ribosome maturation factor RimM
ruditapes_c12517	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimM
ruditapes2_c6055	pentose-phosphate shunt	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes2_c6055	carbohydrate metabolic process	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes2_lrc5259	transport	transport	P	UPF0678 fatty acid-binding protein-like protein KRH
ruditapes2_lrc4375	regulation of cell shape	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_lrc4375	cell cycle	cell cycle and proliferation	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_lrc4375	peptidoglycan biosynthetic process	other metabolic processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_lrc4375	cell wall organization	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_lrc4375	cell division	other biological processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c2015	translational initiation	protein metabolism	P	Translation initiation factor IF-2
ruditapes2_c2015	GTP catabolic process	other metabolic processes	P	Translation initiation factor IF-2
ruditapes2_c2015	translation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_c576	apoptosis	death	P	RNA-binding protein 5 (RNA-binding motif protein 5)
ruditapes_c576	"regulation of alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	RNA-binding protein 5 (RNA-binding motif protein 5)
ruditapes_c576	spliceosome assembly	RNA metabolism	P	RNA-binding protein 5 (RNA-binding motif protein 5)
ruditapes_c576	spliceosome assembly	cell organization and biogenesis	P	RNA-binding protein 5 (RNA-binding motif protein 5)
ruditapes_c576	positive regulation of apoptosis	death	P	RNA-binding protein 5 (RNA-binding motif protein 5)
ruditapes_c576	RNA splicing	RNA metabolism	P	RNA-binding protein 5 (RNA-binding motif protein 5)
ruditapes_c576	mRNA processing	RNA metabolism	P	RNA-binding protein 5 (RNA-binding motif protein 5)
ruditapes_c31954	translation	protein metabolism	P	50S ribosomal protein L15
ruditapes2_c1191	metabolic process	other metabolic processes	P	Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta) (SCS-beta)
ruditapes2_c1191	tricarboxylic acid cycle	other metabolic processes	P	Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta) (SCS-beta)
ruditapes_c18643	oxidation reduction	other metabolic processes	P	Uncharacterized oxidoreductase MMAR
ruditapes2_c4502	terpenoid biosynthetic process	other metabolic processes	P	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) (MECPP-synthase) (MECPS) (EC 4.6.1.12)"
ruditapes2_c4502	isoprenoid biosynthetic process	other metabolic processes	P	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) (MECPP-synthase) (MECPS) (EC 4.6.1.12)"
ruditapes_c34621	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c33392	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c34621	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c33392	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c34621	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c33392	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c33392	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c34621	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c30230	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c30230	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c11356	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes2_c171	lysine biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes2_c171	cellular amino acid biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes2_c171	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes2_c171	diaminopimelate biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes_s37818	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative sporulation transcription regulator WhiA
ruditapes_s37818	"transcription, DNA-dependent"	RNA metabolism	P	Putative sporulation transcription regulator WhiA
ruditapes_lrc27346	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_lrc27346	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutL
ruditapes_lrc27346	mismatch repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_lrc27346	DNA repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_lrc27346	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c31681	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c31681	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c31681	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c31681	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c31681	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c15463	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes2_lrc2969	thiamin biosynthetic process	other metabolic processes	P	Thiamine-phosphate synthase (TP synthase) (TPS) (EC 2.5.1.3) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
ruditapes_c27826	translation	protein metabolism	P	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC 6.3.5.-)
ruditapes_c26260	peptide biosynthetic process	other metabolic processes	P	Elongation factor P (EF-P)
ruditapes_c26260	translation	protein metabolism	P	Elongation factor P (EF-P)
ruditapes_c26260	translational elongation	protein metabolism	P	Elongation factor P (EF-P)
ruditapes2_c395	pantothenate biosynthetic process	other metabolic processes	P	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT)
ruditapes2_c395	methylation	other metabolic processes	P	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT)
ruditapes_c2991	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c2991	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes2_c2166	metabolic process	other metabolic processes	P	Anthocyanidin 3-O-glucoside 5-O-glucosyltransferase (EC 2.4.1.298) (Anthocyanin 5-O-glucosyltransferase) (Gt5GT7)
ruditapes_s38448	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes_c8936	lipid biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_c8936	lipid A biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_lrc7397	biological_process	other biological processes	P	Multimerin-1
ruditapes_lrc28022	biological_process	other biological processes	P	Multimerin-1
ruditapes_c2751	biological_process	other biological processes	P	Multimerin-1
ruditapes_c7077	biological_process	other biological processes	P	Multimerin-1
ruditapes2_c2945	biological_process	other biological processes	P	Multimerin-1
ruditapes_c25385	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Jerky protein homolog-like
ruditapes_c25385	biological_process	other biological processes	P	Jerky protein homolog-like
ruditapes_c9631	small GTPase mediated signal transduction	signal transduction	P	Unconventional myosin-IXa (Unconventional myosin-9a)
ruditapes_c9631	signal transduction	signal transduction	P	Unconventional myosin-IXa (Unconventional myosin-9a)
ruditapes_c9631	visual perception	other biological processes	P	Unconventional myosin-IXa (Unconventional myosin-9a)
ruditapes_c9631	regulation of small GTPase mediated signal transduction	signal transduction	P	Unconventional myosin-IXa (Unconventional myosin-9a)
ruditapes_c9631	positive regulation of GTPase activity	other biological processes	P	Unconventional myosin-IXa (Unconventional myosin-9a)
ruditapes2_c2555	gene silencing by RNA	other metabolic processes	P	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)
ruditapes2_c2555	stem cell maintenance	other biological processes	P	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)
ruditapes2_c2555	miRNA catabolic process	RNA metabolism	P	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)
ruditapes2_c2555	interleukin-6-mediated signaling pathway	signal transduction	P	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)
ruditapes2_c2555	miRNA metabolic process	RNA metabolism	P	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)
ruditapes2_c2555	regulation of lipopolysaccharide-mediated signaling pathway	signal transduction	P	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)
ruditapes2_c2555	positive regulation of interleukin-6 production	other biological processes	P	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)
ruditapes2_c2555	cytokine production	other biological processes	P	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)
ruditapes2_c2555	RNA 3'-end processing	RNA metabolism	P	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)
ruditapes2_c2555	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)
ruditapes2_c2555	pre-microRNA processing	RNA metabolism	P	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)
ruditapes_c15986	positive regulation of cell division	other biological processes	P	Centrosome and spindle pole associated protein 1
ruditapes_c8042	biological_process	other biological processes	P	Elongator complex protein 6 (Protein TMEM103)
ruditapes_c24807	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	F-box only protein 31
ruditapes_c24807	cyclin catabolic process	protein metabolism	P	F-box only protein 31
ruditapes_c24807	response to DNA damage stimulus	stress response	P	F-box only protein 31
ruditapes_c24807	cell cycle	cell cycle and proliferation	P	F-box only protein 31
ruditapes_c24807	G1 DNA damage checkpoint	cell cycle and proliferation	P	F-box only protein 31
ruditapes_c24807	G1 DNA damage checkpoint	signal transduction	P	F-box only protein 31
ruditapes_c24807	G1 DNA damage checkpoint	stress response	P	F-box only protein 31
ruditapes2_c105	translation	protein metabolism	P	"39S ribosomal protein L36, mitochondrial (L36mt) (MRP-L36)"
ruditapes_c27701	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c28081	translation	protein metabolism	P	50S ribosomal protein L30
ruditapes_c10303	translation	protein metabolism	P	50S ribosomal protein L15
ruditapes_c13670	ribosome biogenesis	other biological processes	P	50S ribosomal protein L10
ruditapes_c13670	translation	protein metabolism	P	50S ribosomal protein L10
ruditapes_s39825	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_s39825	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c22993	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimP
ruditapes_c36437	ATP synthesis coupled proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c36437	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c38917	transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c38917	ion transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c36437	ATP biosynthetic process	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c38917	ATP biosynthetic process	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c38917	ATP synthesis coupled proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c38917	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c36437	proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c38917	proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c36437	transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c36437	ion transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c5787	methionine biosynthetic process	other metabolic processes	P	Methylthioribulose-1-phosphate dehydratase (MTRu-1-P dehydratase) (EC 4.2.1.109)
ruditapes_c5787	cellular amino acid biosynthetic process	other metabolic processes	P	Methylthioribulose-1-phosphate dehydratase (MTRu-1-P dehydratase) (EC 4.2.1.109)
ruditapes_c4977	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c4977	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c4977	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c4530	gluconeogenesis	other metabolic processes	P	Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI)
ruditapes_c4530	glycolysis	other metabolic processes	P	Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI)
ruditapes_c17209	flagellum organization	cell organization and biogenesis	P	Flagellar assembly factor FliW
ruditapes_c17209	flagellum assembly	cell organization and biogenesis	P	Flagellar assembly factor FliW
ruditapes_lrc16939	"transcription, DNA-dependent"	RNA metabolism	P	Putative sporulation transcription regulator WhiA
ruditapes_lrc16939	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative sporulation transcription regulator WhiA
ruditapes_c9462	biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes_c9462	pyridine nucleotide biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes_c9462	NAD biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes_c12198	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
ruditapes_c29782	transport	transport	P	NADH-quinone oxidoreductase subunit C (EC 1.6.99.5) (NADH dehydrogenase I subunit C) (NDH-1 subunit C)
ruditapes_c29782	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit C (EC 1.6.99.5) (NADH dehydrogenase I subunit C) (NDH-1 subunit C)
ruditapes_c13203	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Molybdenum cofactor guanylyltransferase (MoCo guanylyltransferase) (EC 2.7.7.77) (GTP:molybdopterin guanylyltransferase) (Mo-MPT guanylyltransferase) (Molybdopterin guanylyltransferase) (Molybdopterin-guanine dinucleotide synthase) (MGD synthase)
ruditapes_c3385	DNA recombination	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c3385	DNA repair	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c3385	DNA repair	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c3385	response to DNA damage stimulus	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c13299	metabolic process	other metabolic processes	P	"Alpha-1,3-galactosidase A (EC 3.2.1.n1) (Exo-alpha-galactosidase A) (EC 3.2.1.22)"
ruditapes_c12240	translation	protein metabolism	P	50S ribosomal protein L25 (General stress protein CTC)
ruditapes_c35357	translation	protein metabolism	P	30S ribosomal protein S7
ruditapes_c30701	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c30701	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c30701	glucose catabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_lrc33550	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes_lrc36811	ribosome biogenesis	other biological processes	P	GTPase Der (GTP-binding protein EngA)
ruditapes_c19504	metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c19504	organic acid metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c19504	phosphorylation	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_s36345	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_s36345	carbohydrate metabolic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_s36345	cell division	other biological processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_s36345	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_s36345	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_s36345	lipid glycosylation	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_s36345	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_s36345	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c28493	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c28493	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c28493	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c28493	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c28493	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c28493	metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c28493	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c28493	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c29772	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c29772	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c29772	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c29772	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c29772	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c24130	metabolic process	other metabolic processes	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c24130	peptidoglycan biosynthetic process	other metabolic processes	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c24130	cell wall organization	cell organization and biogenesis	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c24130	regulation of cell shape	cell organization and biogenesis	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c30519	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c30519	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c30519	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes2_c2306	aromatic amino acid family biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_c2306	tryptophan metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_c2306	metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_c2306	cellular amino acid biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_c2306	tryptophan biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c23220	carbohydrate metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c23220	glycerol-3-phosphate catabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c23220	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c23220	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c23220	oxidation reduction	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c12187	cell wall modification	cell organization and biogenesis	P	Pectinesterase 2 (EC 3.1.1.11) (Pollen allergen Ole e 11.0102) (Ole e 11-2) (allergen Ole e 11.0102)
ruditapes_c24042	proteolysis	protein metabolism	P	Probable zinc metalloprotease PTRG
ruditapes_c20847	cellular process	other biological processes	P	Probable Xaa-Pro aminopeptidase PTRG
ruditapes_c20847	proteolysis	protein metabolism	P	Probable Xaa-Pro aminopeptidase PTRG
ruditapes_c21188	protein catabolic process	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-)
ruditapes_c21188	proteolysis	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-)
ruditapes_c5003	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_lrc23037	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta') (RNA polymerase subunit beta')
ruditapes_lrc26056	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_lrc26056	ion transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes2_lrc1552	ion transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_lrc26056	proton transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes2_lrc1552	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_lrc26056	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_lrc26056	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes2_lrc1552	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes2_lrc1552	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes_lrc26056	transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes2_lrc1552	proton transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes2_lrc1552	transport	transport	P	"ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)"
ruditapes2_c2931	translation	protein metabolism	P	"50S ribosomal protein L20, chloroplastic"
ruditapes_c21770	regulation of anion transport	transport	P	Golgi pH regulator (Protein GPR89)
ruditapes_c21770	intracellular pH reduction	other biological processes	P	Golgi pH regulator (Protein GPR89)
ruditapes_c21770	ion transport	transport	P	Golgi pH regulator (Protein GPR89)
ruditapes_c21770	transport	transport	P	Golgi pH regulator (Protein GPR89)
ruditapes_c21770	regulation of transmembrane ion transport	transport	P	Golgi pH regulator (Protein GPR89)
ruditapes_c21770	protein transport	transport	P	Golgi pH regulator (Protein GPR89)
ruditapes2_lrc5116	defense response	stress response	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc32179	defense response to bacterium	stress response	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc28280	cytolysis	death	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc32179	cytolysis	death	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc28280	metabolic process	other metabolic processes	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_s33894	defense response	stress response	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes2_lrc5116	cytolysis	death	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc28280	defense response to bacterium	stress response	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc35920	defense response	stress response	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc28280	defense response	stress response	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes2_lrc5116	defense response to bacterium	stress response	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes2_lrc5116	metabolic process	other metabolic processes	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc35920	cytolysis	death	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc35920	metabolic process	other metabolic processes	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_s33894	defense response to bacterium	stress response	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc32179	metabolic process	other metabolic processes	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc35920	defense response to bacterium	stress response	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_lrc32179	defense response	stress response	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_s33894	metabolic process	other metabolic processes	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes_s33894	cytolysis	death	P	"Lysozyme 3 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 3) (cv-lysozyme 3)"
ruditapes2_c2581	tRNA processing	RNA metabolism	P	Ubiquitin-related modifier 1 homolog
ruditapes2_c2581	tRNA thio-modification	RNA metabolism	P	Ubiquitin-related modifier 1 homolog
ruditapes_c8088	translation	protein metabolism	P	50S ribosomal protein L9
ruditapes_c966	tRNA processing	RNA metabolism	P	tRNA(Ile)-lysidine synthase (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase)
ruditapes_c1537	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c2912	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c1089	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c2912	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c1537	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c1089	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c19312	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c19312	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c19312	translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c19312	tRNA aminoacylation for protein translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c19312	tRNA aminoacylation for protein translation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c19312	tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c26918	translation	protein metabolism	P	30S ribosomal protein S13
ruditapes2_c2836	porphyrin biosynthetic process	other metabolic processes	P	Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37)
ruditapes_c7080	oxidation reduction	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes_c7080	heme biosynthetic process	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes_c7080	heme a biosynthetic process	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes2_c1752	biological_process	other biological processes	P	Transmembrane protein 186
ruditapes_c3145	"transcription, DNA-dependent"	RNA metabolism	P	Teashirt homolog 1 (Teashirt-like zinc finger protein)
ruditapes_c3145	multicellular organismal development	developmental processes	P	Teashirt homolog 1 (Teashirt-like zinc finger protein)
ruditapes_c3145	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Teashirt homolog 1 (Teashirt-like zinc finger protein)
ruditapes_c14112	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes_c14112	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes_c14112	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes_c26169	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c26169	translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c26169	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c26169	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c26169	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c26169	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c23108	aromatic amino acid family biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c23108	cellular amino acid biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c4279	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c4279	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes2_c414	mRNA catabolic process	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes2_c414	RNA processing	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes_c22949	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c22949	oxidation reduction	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c22949	cell division	other biological processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c22949	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c22949	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c22949	cell cycle	cell cycle and proliferation	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_s36962	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_s36962	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_s36962	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c18869	mismatch repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c18869	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c18869	DNA repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c18869	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c18869	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutL
ruditapes_c25147	phosphorylation	other metabolic processes	P	"Putative pyruvate, phosphate dikinase regulatory protein (PPDK regulatory protein) (EC 2.7.11.32) (EC 2.7.4.27)"
ruditapes_c25148	tRNA wobble uridine modification	RNA metabolism	P	tRNA (mo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c25148	methylation	other metabolic processes	P	tRNA (mo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c31615	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_c31615	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_c31615	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_c31615	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_c31615	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_c30558	carbohydrate metabolic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes_c30558	glycogen metabolic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes_c21671	glycogen biosynthetic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes_c30558	biosynthetic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes_c21671	carbohydrate metabolic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes_c21671	glycogen metabolic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes_c30558	glycogen biosynthetic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes_c21671	biosynthetic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes2_c2691	transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c2691	ATP synthesis coupled proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c2691	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c2691	ATP biosynthetic process	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c2691	proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c2691	ion transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c28621	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes2_c506	cellular amino acid metabolic process	other metabolic processes	P	Probable pyruvoyl-dependent arginine decarboxylase (PvlArgDC) (EC 4.1.1.19) [Cleaved into: Pyruvoyl-dependent arginine decarboxylase subunit beta; Pyruvoyl-dependent arginine decarboxylase subunit alpha]
ruditapes2_c506	arginine catabolic process	other metabolic processes	P	Probable pyruvoyl-dependent arginine decarboxylase (PvlArgDC) (EC 4.1.1.19) [Cleaved into: Pyruvoyl-dependent arginine decarboxylase subunit beta; Pyruvoyl-dependent arginine decarboxylase subunit alpha]
ruditapes_c13314	ATP synthesis coupled proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c13314	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c13314	ion transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c13314	proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c13314	ATP biosynthetic process	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c13314	transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c4350	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes_c4350	transport	transport	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes_c26963	ribosome biogenesis	other biological processes	P	GTPase Der (GTP-binding protein EngA)
ruditapes_c13272	DNA repair	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c13272	DNA repair	DNA metabolism	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c13272	response to DNA damage stimulus	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c13272	nucleotide-excision repair	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c13272	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c13272	SOS response	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c2336	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c2336	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c2336	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c2336	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c2336	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c22038	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c22038	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_lrc9000	lipid biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_lrc9000	lipid A biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_c8864	tRNA processing	RNA metabolism	P	tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase)
ruditapes_c7291	ribosome biogenesis	other biological processes	P	GTPase Era
ruditapes_c28698	tRNA modification	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c28698	tRNA processing	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c28698	small GTPase mediated signal transduction	signal transduction	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c28698	GTP catabolic process	other metabolic processes	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes2_lrc3818	response to DNA damage stimulus	stress response	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes2_lrc3818	DNA recombination	DNA metabolism	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes2_lrc3818	DNA repair	DNA metabolism	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes2_lrc3818	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes2_lrc3818	DNA repair	stress response	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_lrc9232	one-carbon compound metabolic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes_lrc9232	folic acid and derivative biosynthetic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes_c21196	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes_c21196	oxidation reduction	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes_c21196	UMP biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes_c21196	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes_c30301	translation	protein metabolism	P	"Translation factor GUF1 homolog, mitochondrial (EC 3.6.5.-) (Elongation factor 4 homolog) (EF-4) (GTPase GUF1 homolog) (Ribosomal back-translocase)"
ruditapes_c30301	GTP catabolic process	other metabolic processes	P	"Translation factor GUF1 homolog, mitochondrial (EC 3.6.5.-) (Elongation factor 4 homolog) (EF-4) (GTPase GUF1 homolog) (Ribosomal back-translocase)"
ruditapes_c15810	ubiquinone biosynthetic process	other metabolic processes	P	"Ubiquinone biosynthesis protein COQ4, mitochondrial (Coenzyme Q biosynthesis protein 4)"
ruditapes_c10997	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PLK4 (EC 2.7.11.21) (Polo-like kinase 4) (PLK-4) (Serine/threonine-protein kinase SAK)
ruditapes_c10997	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PLK4 (EC 2.7.11.21) (Polo-like kinase 4) (PLK-4) (Serine/threonine-protein kinase SAK)
ruditapes_c17836	"regulation of transcription, DNA-dependent"	RNA metabolism	P	SAGA-associated factor 11 homolog
ruditapes_c17836	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	SAGA-associated factor 11 homolog
ruditapes_c17836	chromatin modification	cell organization and biogenesis	P	SAGA-associated factor 11 homolog
ruditapes_c17836	"transcription, DNA-dependent"	RNA metabolism	P	SAGA-associated factor 11 homolog
ruditapes_c6337	regulation of synapse organization	cell organization and biogenesis	P	Kelch-like protein diablo
ruditapes_c6337	regulation of synapse organization	cell-cell signaling	P	Kelch-like protein diablo
ruditapes_c6337	cell growth	other biological processes	P	Kelch-like protein diablo
ruditapes_c122	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c122	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_c993	meiosis	cell cycle and proliferation	P	Protein maelstrom 2
ruditapes2_c993	multicellular organismal development	developmental processes	P	Protein maelstrom 2
ruditapes2_c993	germ-line stem cell maintenance	other biological processes	P	Protein maelstrom 2
ruditapes2_c993	"transcription, DNA-dependent"	RNA metabolism	P	Protein maelstrom 2
ruditapes2_c993	piRNA metabolic process	RNA metabolism	P	Protein maelstrom 2
ruditapes2_c993	oogenesis	other biological processes	P	Protein maelstrom 2
ruditapes2_c993	cell differentiation	other biological processes	P	Protein maelstrom 2
ruditapes2_c993	spermatogenesis	other biological processes	P	Protein maelstrom 2
ruditapes2_c993	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein maelstrom 2
ruditapes2_c993	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein maelstrom 2
ruditapes2_c993	gene silencing by RNA	other metabolic processes	P	Protein maelstrom 2
ruditapes_c21746	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger CCCH-type with G patch domain-containing protein
ruditapes_c21746	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger CCCH-type with G patch domain-containing protein
ruditapes_c30970	transport	transport	P	ATPase ASNA1 homolog (EC 3.6.-.-) (Arsenical pump-driving ATPase homolog) (Arsenite-stimulated ATPase)
ruditapes_c30970	ATP catabolic process	other metabolic processes	P	ATPase ASNA1 homolog (EC 3.6.-.-) (Arsenical pump-driving ATPase homolog) (Arsenite-stimulated ATPase)
ruditapes_c8229	lipid A biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c8229	lipid biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c24968	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c24968	nucleoside metabolic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c26192	biotin biosynthetic process	other metabolic processes	P	ATP-dependent dethiobiotin synthetase BioD (EC 6.3.3.3) (DTB synthetase) (DTBS) (Dethiobiotin synthase)
ruditapes2_c967	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)
ruditapes2_c967	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)
ruditapes2_c967	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)
ruditapes_c15550	fatty acid biosynthetic process	other metabolic processes	P	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59) (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA) (Beta-hydroxydecanoyl thioester dehydrase) (Trans-2-decenoyl-[acyl-carrier-protein] isomerase) (EC 5.3.3.14)
ruditapes_c15550	lipid biosynthetic process	other metabolic processes	P	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59) (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA) (Beta-hydroxydecanoyl thioester dehydrase) (Trans-2-decenoyl-[acyl-carrier-protein] isomerase) (EC 5.3.3.14)
ruditapes_c15550	biosynthetic process	other metabolic processes	P	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59) (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA) (Beta-hydroxydecanoyl thioester dehydrase) (Trans-2-decenoyl-[acyl-carrier-protein] isomerase) (EC 5.3.3.14)
ruditapes_c9493	protein folding	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes_c9493	protein refolding	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes_c9493	cellular protein metabolic process	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes2_c3124	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_lrc35694	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_c20793	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c20793	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c20793	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c20793	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c20793	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c15738	protein folding	protein metabolism	P	ATP-dependent Clp protease ATP-binding subunit ClpX
ruditapes_c26248	tetrahydrobiopterin biosynthetic process	other metabolic processes	P	Putative pterin-4-alpha-carbinolamine dehydratase (PHS) (EC 4.2.1.96) (4-alpha-hydroxy-tetrahydropterin dehydratase) (Pterin carbinolamine dehydratase) (PCD)
ruditapes_lrc33263	translation	protein metabolism	P	50S ribosomal protein L23
ruditapes2_c362	fatty acid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes2_c362	phospholipid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_c21342	translation	protein metabolism	P	50S ribosomal protein L35
ruditapes_lrc33666	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_lrc33666	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_lrc33666	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_lrc33666	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c19741	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c19741	cell division	other biological processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c19741	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c19741	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c19741	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c19741	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c5767	pigment biosynthetic process	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c5767	bacteriochlorophyll biosynthetic process	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c5767	photosynthesis	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c5767	chlorophyll biosynthetic process	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c5767	"photosynthesis, dark reaction"	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c5767	oxidation reduction	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c13867	translation	protein metabolism	P	50S ribosomal protein L6
ruditapes_c28620	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase)
ruditapes_c28620	phosphorylation	other metabolic processes	P	Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase)
ruditapes_c15742	SOS response	stress response	P	Protein RecA (Recombinase A)
ruditapes_c15742	DNA repair	stress response	P	Protein RecA (Recombinase A)
ruditapes_c15742	DNA repair	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c15742	DNA recombination	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c15742	response to DNA damage stimulus	stress response	P	Protein RecA (Recombinase A)
ruditapes_c15742	DNA metabolic process	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c10236	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c10236	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c10236	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c17136	protein catabolic process	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH 3 (EC 3.4.24.-)
ruditapes_c17136	proteolysis	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH 3 (EC 3.4.24.-)
ruditapes_c10904	tricarboxylic acid cycle	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes_c10904	carbohydrate metabolic process	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes_c10904	cellular carbohydrate metabolic process	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes_c10904	oxidation reduction	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes_c10904	malate metabolic process	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes_c1856	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c4898	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c2532	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c653	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c547	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c3134	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c920	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c1856	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c4332	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes2_lrc5463	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes2_lrc3274	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c2877	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c2532	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes2_c502	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c4332	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c547	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c4898	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes2_lrc5463	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes2_c238	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes2_lrc3274	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c3134	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c2877	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c920	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c653	defense response to bacterium	stress response	P	Hydramacin-1 (Hm-1)
ruditapes2_c238	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes2_c502	innate immune response	stress response	P	Hydramacin-1 (Hm-1)
ruditapes_c21905	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta') (RNA polymerase subunit beta')
ruditapes_c13936	tRNA 3'-trailer cleavage	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes_c13936	tRNA processing	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes_lrc35096	glycolysis	other metabolic processes	P	Probable phosphoglycerate mutase GpmB (EC 5.4.2.1) (PGAM) (Phosphoglyceromutase)
ruditapes_lrc35096	metabolic process	other metabolic processes	P	Probable phosphoglycerate mutase GpmB (EC 5.4.2.1) (PGAM) (Phosphoglyceromutase)
ruditapes_c11756	ubiquinone biosynthetic process	other metabolic processes	P	Chorismate--pyruvate lyase (CL) (CPL) (EC 4.1.3.40)
ruditapes_c27696	aromatic amino acid family biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c27696	cellular amino acid biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c9135	DNA repair	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c9135	DNA repair	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c9135	DNA recombination	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c9135	response to DNA damage stimulus	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c9135	regulation of ARF GTPase activity	signal transduction	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c22645	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c22645	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes2_c1163	ATP biosynthetic process	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c1163	ion transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c1163	proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c1163	ATP synthesis coupled proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c1163	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c1163	transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c19222	carbohydrate metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes_c19222	cellular metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes2_c418	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c418	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c418	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c35230	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c35230	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c35230	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c35230	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c418	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c418	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c35230	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c26006	signal transduction	signal transduction	P	Latrophilin Cirl
ruditapes_c26006	G-protein coupled receptor protein signaling pathway	signal transduction	P	Latrophilin Cirl
ruditapes_c26006	cell surface receptor linked signal transduction	signal transduction	P	Latrophilin Cirl
ruditapes_c26006	neuropeptide signaling pathway	signal transduction	P	Latrophilin Cirl
ruditapes2_c67	cellular amino acid biosynthetic process	other metabolic processes	P	Probable methylthioribulose-1-phosphate dehydratase (MTRu-1-P dehydratase) (EC 4.2.1.109)
ruditapes2_c67	methionine biosynthetic process	other metabolic processes	P	Probable methylthioribulose-1-phosphate dehydratase (MTRu-1-P dehydratase) (EC 4.2.1.109)
ruditapes_c9357	trehalose transport	transport	P	Facilitated trehalose transporter Tret1-2 homolog
ruditapes_c9357	transport	transport	P	Facilitated trehalose transporter Tret1-2 homolog
ruditapes_c9357	transmembrane transport	transport	P	Facilitated trehalose transporter Tret1-2 homolog
ruditapes_c12401	cell differentiation	other biological processes	P	Protein cueball
ruditapes_c12401	spermatogenesis	other biological processes	P	Protein cueball
ruditapes_c12401	oogenesis	other biological processes	P	Protein cueball
ruditapes_c11934	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase subunit QTRTD1 homolog (EC 2.4.2.29) (Queuine tRNA-ribosyltransferase domain-containing protein 1)
ruditapes_c11934	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase subunit QTRTD1 homolog (EC 2.4.2.29) (Queuine tRNA-ribosyltransferase domain-containing protein 1)
ruditapes_c11934	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase subunit QTRTD1 homolog (EC 2.4.2.29) (Queuine tRNA-ribosyltransferase domain-containing protein 1)
ruditapes_c18861	lipoate biosynthetic process	other metabolic processes	P	"Lipoyl synthase, mitochondrial (EC 2.8.1.8) (Lipoate synthase) (LS) (Lip-syn) (Lipoic acid synthase)"
ruditapes_c31067	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c31067	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c24136	multicellular organismal development	developmental processes	P	Protein asunder (Cell cycle regulator Mat89Bb) (Maternal transcript 89Bb) (Set apart in position or space protein)
ruditapes_c24136	cell division	other biological processes	P	Protein asunder (Cell cycle regulator Mat89Bb) (Maternal transcript 89Bb) (Set apart in position or space protein)
ruditapes_c24136	cell cycle	cell cycle and proliferation	P	Protein asunder (Cell cycle regulator Mat89Bb) (Maternal transcript 89Bb) (Set apart in position or space protein)
ruditapes_c24136	regulation of mitotic cell cycle	cell cycle and proliferation	P	Protein asunder (Cell cycle regulator Mat89Bb) (Maternal transcript 89Bb) (Set apart in position or space protein)
ruditapes_c24136	mitosis	cell cycle and proliferation	P	Protein asunder (Cell cycle regulator Mat89Bb) (Maternal transcript 89Bb) (Set apart in position or space protein)
ruditapes_c24136	mitosis	cell organization and biogenesis	P	Protein asunder (Cell cycle regulator Mat89Bb) (Maternal transcript 89Bb) (Set apart in position or space protein)
ruditapes_c16757	multicellular organismal development	developmental processes	P	Probable ATP-dependent RNA helicase spindle-E (EC 3.6.4.13) (Homeless)
ruditapes_c16757	meiosis	cell cycle and proliferation	P	Probable ATP-dependent RNA helicase spindle-E (EC 3.6.4.13) (Homeless)
ruditapes_c16757	gene silencing by RNA	other metabolic processes	P	Probable ATP-dependent RNA helicase spindle-E (EC 3.6.4.13) (Homeless)
ruditapes_c16757	cell differentiation	other biological processes	P	Probable ATP-dependent RNA helicase spindle-E (EC 3.6.4.13) (Homeless)
ruditapes_c16757	spermatogenesis	other biological processes	P	Probable ATP-dependent RNA helicase spindle-E (EC 3.6.4.13) (Homeless)
ruditapes_c16757	oogenesis	other biological processes	P	Probable ATP-dependent RNA helicase spindle-E (EC 3.6.4.13) (Homeless)
ruditapes_c27351	biological_process	other biological processes	P	"NFU1 iron-sulfur cluster scaffold homolog, mitochondrial"
ruditapes_c27351	iron-sulfur cluster assembly	other metabolic processes	P	"NFU1 iron-sulfur cluster scaffold homolog, mitochondrial"
ruditapes_c16977	dephosphorylation	other metabolic processes	P	Protein phosphatase PTC7 homolog fig (Fos intronic gene protein) (EC 3.1.3.16)
ruditapes_c16977	metabolic process	other metabolic processes	P	Protein phosphatase PTC7 homolog fig (Fos intronic gene protein) (EC 3.1.3.16)
ruditapes_c8011	mitosis	cell cycle and proliferation	P	Spastin (EC 3.6.4.3)
ruditapes_c8011	mitosis	cell organization and biogenesis	P	Spastin (EC 3.6.4.3)
ruditapes_c8011	microtubule severing	other biological processes	P	Spastin (EC 3.6.4.3)
ruditapes_c8011	multicellular organismal development	developmental processes	P	Spastin (EC 3.6.4.3)
ruditapes_c8011	cell cycle	cell cycle and proliferation	P	Spastin (EC 3.6.4.3)
ruditapes_c8011	cell division	other biological processes	P	Spastin (EC 3.6.4.3)
ruditapes_c8011	nervous system development	developmental processes	P	Spastin (EC 3.6.4.3)
ruditapes_c8011	ATP catabolic process	other metabolic processes	P	Spastin (EC 3.6.4.3)
ruditapes_c8011	cell differentiation	other biological processes	P	Spastin (EC 3.6.4.3)
ruditapes_c18709	signal transduction	signal transduction	P	Ras-like protein 1
ruditapes_c18709	GTP catabolic process	other metabolic processes	P	Ras-like protein 1
ruditapes_c18709	small GTPase mediated signal transduction	signal transduction	P	Ras-like protein 1
ruditapes_c8820	nervous system development	developmental processes	P	F-box/SPRY domain-containing protein 1
ruditapes_c8820	negative regulation of synaptic growth at neuromuscular junction	developmental processes	P	F-box/SPRY domain-containing protein 1
ruditapes_c8820	negative regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	F-box/SPRY domain-containing protein 1
ruditapes_c8820	negative regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	F-box/SPRY domain-containing protein 1
ruditapes_c8820	neuromuscular synaptic transmission	cell-cell signaling	P	F-box/SPRY domain-containing protein 1
ruditapes_c10033	carbohydrate transport	transport	P	Facilitated trehalose transporter Tret1
ruditapes_c10033	transmembrane transport	transport	P	Facilitated trehalose transporter Tret1
ruditapes_c10033	trehalose transport	transport	P	Facilitated trehalose transporter Tret1
ruditapes_c10033	transport	transport	P	Facilitated trehalose transporter Tret1
ruditapes_c4184	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c4184	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c11838	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein maelstrom
ruditapes_c11838	meiosis	cell cycle and proliferation	P	Protein maelstrom
ruditapes_c11838	gene silencing by RNA	other metabolic processes	P	Protein maelstrom
ruditapes_c11838	oogenesis	other biological processes	P	Protein maelstrom
ruditapes_c11838	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein maelstrom
ruditapes_c11838	"transcription, DNA-dependent"	RNA metabolism	P	Protein maelstrom
ruditapes_c11838	piRNA metabolic process	RNA metabolism	P	Protein maelstrom
ruditapes_c11838	spermatogenesis	other biological processes	P	Protein maelstrom
ruditapes_c11838	germ-line stem cell maintenance	other biological processes	P	Protein maelstrom
ruditapes_c11838	cell differentiation	other biological processes	P	Protein maelstrom
ruditapes_c11838	multicellular organismal development	developmental processes	P	Protein maelstrom
ruditapes2_c870	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit M (eIF3m) (Transport and Golgi organization protein 7) (Tango-7)
ruditapes2_c870	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit M (eIF3m) (Transport and Golgi organization protein 7) (Tango-7)
ruditapes2_c3550	regulation of cell cycle	cell cycle and proliferation	P	Ribosome biogenesis protein BOP1 homolog
ruditapes2_c3550	rRNA processing	RNA metabolism	P	Ribosome biogenesis protein BOP1 homolog
ruditapes2_c3550	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein BOP1 homolog
ruditapes2_lrc6129	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_lrc20197	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_c338	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_c338	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_lrc3959	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_c3125	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c4430	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c1098	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c4919	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_c3125	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c4919	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_lrc6129	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_lrc20197	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c4430	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_lrc4263	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_lrc4263	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_lrc3959	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c1098	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c29329	transport	transport	P	Enhancer of yellow 2 transcription factor
ruditapes_c29329	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Enhancer of yellow 2 transcription factor
ruditapes_c29329	mRNA export from nucleus	transport	P	Enhancer of yellow 2 transcription factor
ruditapes_c29329	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Enhancer of yellow 2 transcription factor
ruditapes_c29329	mRNA transport	transport	P	Enhancer of yellow 2 transcription factor
ruditapes_c29329	"transcription, DNA-dependent"	RNA metabolism	P	Enhancer of yellow 2 transcription factor
ruditapes_c29329	chromatin modification	cell organization and biogenesis	P	Enhancer of yellow 2 transcription factor
ruditapes_lrc28102	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_lrc28102	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_lrc28102	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_lrc10580	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_lrc10580	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c11911	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit C (eIF3c) (Eukaryotic translation initiation factor 3 subunit 8)
ruditapes_c11911	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit C (eIF3c) (Eukaryotic translation initiation factor 3 subunit 8)
ruditapes_s38084	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3)
ruditapes_s38084	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3)
ruditapes_c8105	signal transduction	signal transduction	P	"cGMP-specific 3',5'-cyclic phosphodiesterase (EC 3.1.4.35)"
ruditapes_c8105	cGMP metabolic process	other metabolic processes	P	"cGMP-specific 3',5'-cyclic phosphodiesterase (EC 3.1.4.35)"
ruditapes_c8105	metabolic process	other metabolic processes	P	"cGMP-specific 3',5'-cyclic phosphodiesterase (EC 3.1.4.35)"
ruditapes_c14015	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Molybdopterin synthase catalytic subunit (EC 2.8.1.12) (Molybdenum cofactor synthesis protein 2 large subunit) (Molybdenum cofactor synthesis protein 2B) (MOCS2B)
ruditapes_c10627	biological_process	other biological processes	P	"NFU1 iron-sulfur cluster scaffold homolog, mitochondrial"
ruditapes_c10627	iron-sulfur cluster assembly	other metabolic processes	P	"NFU1 iron-sulfur cluster scaffold homolog, mitochondrial"
ruditapes2_c2475	biological_process	other biological processes	P	DM7 family protein GE17493
ruditapes2_c419	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_c419	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c10111	mitosis	cell cycle and proliferation	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	mitosis	cell organization and biogenesis	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	DNA repair	stress response	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	DNA repair	DNA metabolism	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	DNA synthesis during double-strand break repair via homologous recombination	stress response	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	DNA synthesis during double-strand break repair via homologous recombination	DNA metabolism	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	meiotic DNA repair synthesis involved in reciprocal meiotic recombination	cell cycle and proliferation	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	meiotic DNA repair synthesis involved in reciprocal meiotic recombination	stress response	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	meiotic DNA repair synthesis involved in reciprocal meiotic recombination	DNA metabolism	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	cell division	other biological processes	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	meiosis	cell cycle and proliferation	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	cell cycle	cell cycle and proliferation	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	double-strand break repair	stress response	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	double-strand break repair	DNA metabolism	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	meiotic recombination checkpoint	cell cycle and proliferation	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c10111	response to DNA damage stimulus	stress response	P	Breast cancer type 2 susceptibility protein homolog
ruditapes_c14072	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c14072	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_s36860	tRNA processing	RNA metabolism	P	Ribonuclease PH (RNase PH) (EC 2.7.7.56) (tRNA nucleotidyltransferase)
ruditapes_s36860	RNA processing	RNA metabolism	P	Ribonuclease PH (RNase PH) (EC 2.7.7.56) (tRNA nucleotidyltransferase)
ruditapes_c4500	D-amino acid catabolic process	other metabolic processes	P	D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)
ruditapes_c22450	ion transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c22450	transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c22450	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c22450	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c22450	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c22450	proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c24407	thiamin biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c24407	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c24407	metabolic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c24407	terpenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_lrc23120	lipid biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes_lrc23120	macromolecule biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes_lrc23120	fatty acid biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes_c31593	peptidoglycan biosynthetic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c31593	regulation of cell shape	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c31593	cell wall organization	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c31593	alanine metabolic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c8015	nucleoside metabolic process	other metabolic processes	P	Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7)
ruditapes_c8015	purine ribonucleoside salvage	other metabolic processes	P	Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7)
ruditapes_c8015	adenine salvage	other metabolic processes	P	Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7)
ruditapes2_c1003	translation	protein metabolism	P	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) (EC 6.3.5.-)
ruditapes2_c1003	regulation of translational fidelity	protein metabolism	P	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) (EC 6.3.5.-)
ruditapes_c7831	nucleoside biosynthetic process	other metabolic processes	P	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (EC 2.4.2.21) (N(1)-alpha-phosphoribosyltransferase)
ruditapes_c7831	cobalamin biosynthetic process	other metabolic processes	P	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (EC 2.4.2.21) (N(1)-alpha-phosphoribosyltransferase)
ruditapes_c28868	peptidoglycan biosynthetic process	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c28868	response to antibiotic	other biological processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c28868	dephosphorylation	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c28868	regulation of cell shape	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c28868	cell wall organization	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c11939	oxidation reduction	other metabolic processes	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c11939	queuosine biosynthetic process	RNA metabolism	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c15701	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c15701	phosphatidylethanolamine biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes2_c2549	glycine catabolic process	other metabolic processes	P	Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein)
ruditapes2_c2101	translation	protein metabolism	P	Peptide deformylase (PDF) (EC 3.5.1.88) (Polypeptide deformylase)
ruditapes_c32640	DNA catabolic process	DNA metabolism	P	Exodeoxyribonuclease 7 large subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit)
ruditapes_c7843	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit D 2 (EC 1.6.99.5) (NADH dehydrogenase I subunit D 2) (NDH-1 subunit D 2)
ruditapes_c7843	transport	transport	P	NADH-quinone oxidoreductase subunit D 2 (EC 1.6.99.5) (NADH dehydrogenase I subunit D 2) (NDH-1 subunit D 2)
ruditapes_s33508	pathogenesis	other biological processes	P	E3 ubiquitin-protein ligase SopA (EC 6.3.2.-) (Salmonella outer protein A) (Secreted effector protein SopA)
ruditapes_s33508	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase SopA (EC 6.3.2.-) (Salmonella outer protein A) (Secreted effector protein SopA)
ruditapes2_c1666	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes2_c1666	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes2_c1666	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c10481	glucuronate catabolic process	other metabolic processes	P	Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase) (Uronic isomerase)
ruditapes_c1673	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c1673	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c39367	branched chain family amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c39367	oxidation reduction	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c39367	cellular amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c15935	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Probable molybdenum cofactor guanylyltransferase (MoCo guanylyltransferase) (EC 2.7.7.77) (GTP:molybdopterin guanylyltransferase) (Mo-MPT guanylyltransferase) (Molybdopterin guanylyltransferase) (Molybdopterin-guanine dinucleotide synthase) (MGD synthase)
ruditapes_lrc15571	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit alpha (RNAP subunit alpha) (EC 2.7.7.6) (RNA polymerase subunit alpha) (Transcriptase subunit alpha)
ruditapes_c11510	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c11510	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c11510	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c11510	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c11510	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c22204	peptidoglycan biosynthetic process	other metabolic processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c22204	regulation of cell shape	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c22204	cell division	other biological processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c22204	cell cycle	cell cycle and proliferation	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c22204	cell wall organization	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c13529	interspecies interaction between organisms	other biological processes	P	Protein PB1-F2
ruditapes_c13529	apoptosis	death	P	Protein PB1-F2
ruditapes_c9402	signal transduction	signal transduction	P	G-protein coupled receptor 39
ruditapes_c9402	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 39
ruditapes_c31547	metabolic process	other metabolic processes	P	Phosphopentomutase (EC 5.4.2.7) (Phosphodeoxyribomutase)
ruditapes_c31547	nucleotide metabolic process	other metabolic processes	P	Phosphopentomutase (EC 5.4.2.7) (Phosphodeoxyribomutase)
ruditapes_c31547	cellular metabolic compound salvage	other metabolic processes	P	Phosphopentomutase (EC 5.4.2.7) (Phosphodeoxyribomutase)
ruditapes_c28557	ion transport	transport	P	Putative ion-transport protein YfeO
ruditapes_c28557	transmembrane transport	transport	P	Putative ion-transport protein YfeO
ruditapes_c28557	chloride transport	transport	P	Putative ion-transport protein YfeO
ruditapes_c28557	transport	transport	P	Putative ion-transport protein YfeO
ruditapes_c12908	exit from mitosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2 S (EC 6.3.2.19) (Ubiquitin carrier protein S) (Ubiquitin-protein ligase S)
ruditapes_c12908	cell cycle	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2 S (EC 6.3.2.19) (Ubiquitin carrier protein S) (Ubiquitin-protein ligase S)
ruditapes_c12908	free ubiquitin chain polymerization	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2 S (EC 6.3.2.19) (Ubiquitin carrier protein S) (Ubiquitin-protein ligase S)
ruditapes_c12908	activation of anaphase-promoting complex activity	other biological processes	P	Ubiquitin-conjugating enzyme E2 S (EC 6.3.2.19) (Ubiquitin carrier protein S) (Ubiquitin-protein ligase S)
ruditapes_c12908	cell division	other biological processes	P	Ubiquitin-conjugating enzyme E2 S (EC 6.3.2.19) (Ubiquitin carrier protein S) (Ubiquitin-protein ligase S)
ruditapes_c12908	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2 S (EC 6.3.2.19) (Ubiquitin carrier protein S) (Ubiquitin-protein ligase S)
ruditapes_c12908	protein K63-linked ubiquitination	protein metabolism	P	Ubiquitin-conjugating enzyme E2 S (EC 6.3.2.19) (Ubiquitin carrier protein S) (Ubiquitin-protein ligase S)
ruditapes_lrc18866	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase GA29083 (EC 2.7.11.1) (Doublecortin-like and CAM kinase-like protein)
ruditapes_lrc18866	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase GA29083 (EC 2.7.11.1) (Doublecortin-like and CAM kinase-like protein)
ruditapes_lrc8695	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_lrc3655	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_lrc3100	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_lrc3100	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_lrc37608	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes2_lrc3655	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_lrc32744	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_lrc32744	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_lrc8695	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_lrc37608	rhythmic process	other biological processes	P	Protein quiver (Protein sleepless)
ruditapes_c8399	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Protein SMG8 (Protein smg-8 homolog)
ruditapes2_c2656	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit F-2 (eIF3f-2) (Eukaryotic translation initiation factor 3 subunit 5-2)
ruditapes2_c2656	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit F-2 (eIF3f-2) (Eukaryotic translation initiation factor 3 subunit 5-2)
ruditapes_c30196	tryptophan biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c30196	cellular amino acid biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c30196	metabolic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c30196	aromatic amino acid family biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_lrc14496	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_lrc14496	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c17453	queuosine biosynthetic process	RNA metabolism	P	7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
ruditapes_c17453	arginine biosynthetic process	other metabolic processes	P	7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
ruditapes_lrc40050	queuosine biosynthetic process	RNA metabolism	P	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA)
ruditapes_lrc34446	translation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_lrc34446	small GTPase mediated signal transduction	signal transduction	P	Translation initiation factor IF-2
ruditapes_lrc34446	GTP catabolic process	other metabolic processes	P	Translation initiation factor IF-2
ruditapes_lrc34446	translational initiation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_c27249	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c27249	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c12903	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c12903	diaminopimelate biosynthetic process	other metabolic processes	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c12903	lysine biosynthetic process	other metabolic processes	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c12903	proteolysis	protein metabolism	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c12903	metabolic process	other metabolic processes	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c12903	cellular amino acid biosynthetic process	other metabolic processes	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c28276	methylation	other metabolic processes	P	tRNA1(Val) (adenine(37)-N6)-methyltransferase (EC 2.1.1.223) (tRNA m6A37 methyltransferase)
ruditapes_c28276	tRNA processing	RNA metabolism	P	tRNA1(Val) (adenine(37)-N6)-methyltransferase (EC 2.1.1.223) (tRNA m6A37 methyltransferase)
ruditapes2_lrc4920	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35273	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35273	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4920	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4920	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4920	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36683	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36683	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35273	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4920	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36683	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36683	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36683	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35273	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35273	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c18176	base-excision repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c18176	base-excision repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c18176	metabolic process	other metabolic processes	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c18176	response to DNA damage stimulus	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c18176	DNA repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c18176	DNA repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c21016	biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes_c21016	coenzyme A biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes_c24892	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c24892	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c24892	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_s38029	protein catabolic process	protein metabolism	P	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase)
ruditapes_c13537	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes2_c4507	activation of MAPKK activity	signal transduction	P	Ragulator complex protein LAMTOR2 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2)
ruditapes2_c4507	activation of MAPKK activity	protein metabolism	P	Ragulator complex protein LAMTOR2 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2)
ruditapes2_c4507	cell growth	other biological processes	P	Ragulator complex protein LAMTOR2 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2)
ruditapes2_c4507	cellular protein localization	other biological processes	P	Ragulator complex protein LAMTOR2 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2)
ruditapes2_c4507	positive regulation of TOR signaling pathway	signal transduction	P	Ragulator complex protein LAMTOR2 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2)
ruditapes2_c4295	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit I (eIF3i) (Eukaryotic translation initiation factor 3 subunit 2) (eIF-3-beta) (eIF3 p36)
ruditapes2_c4295	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit I (eIF3i) (Eukaryotic translation initiation factor 3 subunit 2) (eIF-3-beta) (eIF3 p36)
ruditapes_c30405	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Enhancer of yellow 2 transcription factor homolog
ruditapes_c30405	transport	transport	P	Enhancer of yellow 2 transcription factor homolog
ruditapes_c30405	mRNA transport	transport	P	Enhancer of yellow 2 transcription factor homolog
ruditapes_c30405	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Enhancer of yellow 2 transcription factor homolog
ruditapes_c30405	chromatin modification	cell organization and biogenesis	P	Enhancer of yellow 2 transcription factor homolog
ruditapes_c30405	histone deubiquitination	protein metabolism	P	Enhancer of yellow 2 transcription factor homolog
ruditapes_c30405	histone deubiquitination	cell organization and biogenesis	P	Enhancer of yellow 2 transcription factor homolog
ruditapes_c30405	"transcription, DNA-dependent"	RNA metabolism	P	Enhancer of yellow 2 transcription factor homolog
ruditapes_c11474	biosynthetic process	other metabolic processes	P	FAD synthase (EC 2.7.7.2) (FMN adenylyltransferase) (Flavin adenine dinucleotide synthase)
ruditapes_c11474	FMN metabolic process	other metabolic processes	P	FAD synthase (EC 2.7.7.2) (FMN adenylyltransferase) (Flavin adenine dinucleotide synthase)
ruditapes_c11474	FAD biosynthetic process	other metabolic processes	P	FAD synthase (EC 2.7.7.2) (FMN adenylyltransferase) (Flavin adenine dinucleotide synthase)
ruditapes2_c1216	phosphorylation	other metabolic processes	P	"Phosphoenolpyruvate synthase regulatory protein (PEP synthase regulatory protein) (PSRP) (EC 2.7.11.-) (EC 2.7.4.-) (Pyruvate, water dikinase regulatory protein)"
ruditapes_c17517	putrescine catabolic process	other metabolic processes	P	Putrescine aminotransferase (EC 2.6.1.82) (Putrescine--2-oxoglutaric acid transaminase) (PAT) (PATase)
ruditapes2_c284	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3) (eIF-3-gamma) (eIF3 p40 subunit)
ruditapes_c4596	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3) (eIF-3-gamma) (eIF3 p40 subunit)
ruditapes2_c284	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3) (eIF-3-gamma) (eIF3 p40 subunit)
ruditapes_c4596	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3) (eIF-3-gamma) (eIF3 p40 subunit)
ruditapes_c8932	metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c8932	phosphorylation	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c8932	organic acid metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_lrc38516	coenzyme A biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes_lrc38516	biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes_c19387	translation	protein metabolism	P	50S ribosomal protein L9
ruditapes_c5405	translation	protein metabolism	P	30S ribosomal protein S18
ruditapes_lrc17046	translational initiation	protein metabolism	P	Translation initiation factor IF-3
ruditapes_lrc17046	translation	protein metabolism	P	Translation initiation factor IF-3
ruditapes_c7409	defense response to fungus	stress response	P	Peptidoglycan recognition protein 1
ruditapes_c7409	defense response to bacterium	stress response	P	Peptidoglycan recognition protein 1
ruditapes_c7409	peptidoglycan catabolic process	other metabolic processes	P	Peptidoglycan recognition protein 1
ruditapes_c7409	killing of cells of another organism	other biological processes	P	Peptidoglycan recognition protein 1
ruditapes_c7409	innate immune response	stress response	P	Peptidoglycan recognition protein 1
ruditapes_c14986	metabolic process	other metabolic processes	P	Isochorismatase domain-containing protein 1
ruditapes_lrc33741	multicellular organismal development	developmental processes	P	Draxin-B (Dorsal inhibitory axon guidance protein B) (Dorsal repulsive axon guidance protein B)
ruditapes_lrc33043	multicellular organismal development	developmental processes	P	Draxin-B (Dorsal inhibitory axon guidance protein B) (Dorsal repulsive axon guidance protein B)
ruditapes_c13301	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 183
ruditapes_c13301	signal transduction	signal transduction	P	G-protein coupled receptor 183
ruditapes_c3813	biosynthetic process	other metabolic processes	P	Adipocyte plasma membrane-associated protein
ruditapes_c3891	cell growth	other biological processes	P	Ragulator complex protein LAMTOR2 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2)
ruditapes2_c102	positive regulation of TOR signaling pathway	signal transduction	P	Ragulator complex protein LAMTOR2 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2)
ruditapes2_c102	cellular protein localization	other biological processes	P	Ragulator complex protein LAMTOR2 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2)
ruditapes2_c102	cell growth	other biological processes	P	Ragulator complex protein LAMTOR2 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2)
ruditapes_c3891	cellular protein localization	other biological processes	P	Ragulator complex protein LAMTOR2 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2)
ruditapes_c3891	positive regulation of TOR signaling pathway	signal transduction	P	Ragulator complex protein LAMTOR2 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2)
ruditapes_c28860	tRNA processing	RNA metabolism	P	Sulfurtransferase TusD (EC 2.8.1.-) (tRNA 2-thiouridine synthesizing protein D)
ruditapes_c16513	transport	transport	P	Multidrug resistance protein MdtC (Multidrug transporter MdtC)
ruditapes_c26981	transport	transport	P	Dipeptide and tripeptide permease A
ruditapes_c26981	protein transport	transport	P	Dipeptide and tripeptide permease A
ruditapes_c26981	oligopeptide transport	transport	P	Dipeptide and tripeptide permease A
ruditapes_c26981	peptide transport	transport	P	Dipeptide and tripeptide permease A
ruditapes_c1206	ATP catabolic process	other metabolic processes	P	ATP-dependent protease ATPase subunit HslU (Unfoldase HslU)
ruditapes_c1206	response to stress	stress response	P	ATP-dependent protease ATPase subunit HslU (Unfoldase HslU)
ruditapes_c18546	tRNA processing	RNA metabolism	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_c18546	methylation	other metabolic processes	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_lrc30168	alanine metabolic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_lrc30168	peptidoglycan biosynthetic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_lrc30168	regulation of cell shape	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_lrc30168	cell wall organization	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_c486	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes2_c486	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes2_c486	translation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes2_c2800	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes2_c2800	metabolic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes2_c2800	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_c11588	translation	protein metabolism	P	30S ribosomal protein S4
ruditapes_c21030	translation	protein metabolism	P	50S ribosomal protein L25 (General stress protein CTC)
ruditapes2_c2451	protein folding	protein metabolism	P	ATP-dependent Clp protease ATP-binding subunit ClpX
ruditapes_s38840	transport	transport	P	Protein translocase subunit SecF
ruditapes_s38840	intracellular protein transport	transport	P	Protein translocase subunit SecF
ruditapes_s38840	protein transport	transport	P	Protein translocase subunit SecF
ruditapes2_c2312	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes2_c2312	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes2_c2312	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c10646	carbohydrate metabolic process	other metabolic processes	P	Phosphoheptose isomerase (EC 5.3.1.28) (Sedoheptulose 7-phosphate isomerase)
ruditapes_c11638	galactitol metabolic process	other metabolic processes	P	"D-tagatose-1,6-bisphosphate aldolase subunit GatZ"
ruditapes_c12153	metabolic process	other metabolic processes	P	Acetyl esterase (EC 3.1.1.-)
ruditapes_c26011	nucleotide metabolic process	other metabolic processes	P	Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
ruditapes_c26011	purine ribonucleoside monophosphate biosynthetic process	other metabolic processes	P	Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
ruditapes_c20531	lipid A biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c20531	lipid biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c22899	barrier septum formation	cell organization and biogenesis	P	Probable GTP-binding protein EngB
ruditapes_c22899	cell division	other biological processes	P	Probable GTP-binding protein EngB
ruditapes_c22899	cell cycle	cell cycle and proliferation	P	Probable GTP-binding protein EngB
ruditapes_c12380	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_c12380	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_c12380	asparagine biosynthetic process	other metabolic processes	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_c12380	cellular amino acid biosynthetic process	other metabolic processes	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_lrc32891	oxidation reduction	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes_lrc32891	glycine metabolic process	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes_c29550	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase alpha subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase alpha subunit) (GlyRS)
ruditapes_c29550	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase alpha subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase alpha subunit) (GlyRS)
ruditapes_c29550	translation	protein metabolism	P	Glycine--tRNA ligase alpha subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase alpha subunit) (GlyRS)
ruditapes_c15248	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c15248	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c15248	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c15248	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c29687	cilium morphogenesis	cell organization and biogenesis	P	"Dynein assembly factor 1, axonemal (Leucine-rich repeat-containing protein 50)"
ruditapes_c12346	one-carbon compound metabolic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes_c12346	folic acid and derivative biosynthetic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes_c24804	tRNA 3'-terminal CCA addition	RNA metabolism	P	"Multifunctional CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.72) (CCA tRNA nucleotidyltransferase) (tRNA CCA-pyrophosphorylase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA nucleotidyltransferase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-); Phosphatase (EC 3.1.3.-)]"
ruditapes_c24804	tRNA processing	RNA metabolism	P	"Multifunctional CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.72) (CCA tRNA nucleotidyltransferase) (tRNA CCA-pyrophosphorylase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA nucleotidyltransferase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-); Phosphatase (EC 3.1.3.-)]"
ruditapes_c24804	RNA repair	RNA metabolism	P	"Multifunctional CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.72) (CCA tRNA nucleotidyltransferase) (tRNA CCA-pyrophosphorylase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA nucleotidyltransferase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-); Phosphatase (EC 3.1.3.-)]"
ruditapes_c24804	RNA processing	RNA metabolism	P	"Multifunctional CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.72) (CCA tRNA nucleotidyltransferase) (tRNA CCA-pyrophosphorylase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA nucleotidyltransferase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-); Phosphatase (EC 3.1.3.-)]"
ruditapes_c24804	metabolic process	other metabolic processes	P	"Multifunctional CCA protein [Includes: CCA-adding enzyme (EC 2.7.7.72) (CCA tRNA nucleotidyltransferase) (tRNA CCA-pyrophosphorylase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA nucleotidyltransferase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cyclic phosphodiesterase (EC 3.1.4.-); Phosphatase (EC 3.1.3.-)]"
ruditapes_c22801	N-acetylglucosamine metabolic process	other metabolic processes	P	Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase)
ruditapes_c22801	carbohydrate metabolic process	other metabolic processes	P	Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase)
ruditapes_c22801	metabolic process	other metabolic processes	P	Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase)
ruditapes_c14241	proteolysis	protein metabolism	P	Probable zinc metalloprotease Pc13g02170 (EC 3.4.-.-)
ruditapes_c23791	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c23791	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c23791	translation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c23791	arginyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c23791	arginyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c22682	transport	transport	P	NADH-quinone oxidoreductase subunit B (EC 1.6.99.5) (NADH dehydrogenase I subunit B) (NDH-1 subunit B)
ruditapes_c22682	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit B (EC 1.6.99.5) (NADH dehydrogenase I subunit B) (NDH-1 subunit B)
ruditapes_c9053	response to DNA damage stimulus	stress response	P	DNA replication and repair protein RecF
ruditapes_c9053	DNA replication	DNA metabolism	P	DNA replication and repair protein RecF
ruditapes_c9053	SOS response	stress response	P	DNA replication and repair protein RecF
ruditapes_c9053	DNA repair	stress response	P	DNA replication and repair protein RecF
ruditapes_c9053	DNA repair	DNA metabolism	P	DNA replication and repair protein RecF
ruditapes_c25481	biosynthetic process	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c25481	methylation	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c25481	translation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c25481	translational initiation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c279	DNA repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c279	DNA repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c279	response to DNA damage stimulus	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c279	base-excision repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c279	base-excision repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c279	metabolic process	other metabolic processes	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c19234	translation	protein metabolism	P	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase)
ruditapes_c19234	selenocysteine incorporation	protein metabolism	P	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase)
ruditapes_lrc32247	pyridoxine biosynthetic process	other metabolic processes	P	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase)
ruditapes_lrc32247	oxidation reduction	other metabolic processes	P	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase)
ruditapes_c21047	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c21047	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c21047	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c21047	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c7920	pathogenesis	other biological processes	P	"Apical membrane antigen 1 (TgAMA-1) (TgAMA1) [Cleaved into: Apical membrane antigen 1, soluble form]"
ruditapes_c23331	"transcription, DNA-dependent"	RNA metabolism	P	"Histone H2A deubiquitinase MYSM1 (2A-DUB) (EC 3.4.19.-) (Myb-like, SWIRM and MPN domain-containing protein 1)"
ruditapes_c23331	chromatin modification	cell organization and biogenesis	P	"Histone H2A deubiquitinase MYSM1 (2A-DUB) (EC 3.4.19.-) (Myb-like, SWIRM and MPN domain-containing protein 1)"
ruditapes_c23331	histone deubiquitination	protein metabolism	P	"Histone H2A deubiquitinase MYSM1 (2A-DUB) (EC 3.4.19.-) (Myb-like, SWIRM and MPN domain-containing protein 1)"
ruditapes_c23331	histone deubiquitination	cell organization and biogenesis	P	"Histone H2A deubiquitinase MYSM1 (2A-DUB) (EC 3.4.19.-) (Myb-like, SWIRM and MPN domain-containing protein 1)"
ruditapes_c23331	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	"Histone H2A deubiquitinase MYSM1 (2A-DUB) (EC 3.4.19.-) (Myb-like, SWIRM and MPN domain-containing protein 1)"
ruditapes_c23331	proteolysis	protein metabolism	P	"Histone H2A deubiquitinase MYSM1 (2A-DUB) (EC 3.4.19.-) (Myb-like, SWIRM and MPN domain-containing protein 1)"
ruditapes_c23331	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Histone H2A deubiquitinase MYSM1 (2A-DUB) (EC 3.4.19.-) (Myb-like, SWIRM and MPN domain-containing protein 1)"
ruditapes_lrc28913	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes_lrc28913	methylation	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes_lrc28913	phospholipid metabolic process	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes_c26840	metabolic process	other metabolic processes	P	Probable beta-galactosidase B (EC 3.2.1.23) (Lactase B)
ruditapes_c26840	carbohydrate metabolic process	other metabolic processes	P	Probable beta-galactosidase B (EC 3.2.1.23) (Lactase B)
ruditapes_c26840	polysaccharide catabolic process	other metabolic processes	P	Probable beta-galactosidase B (EC 3.2.1.23) (Lactase B)
ruditapes_c15576	protein transport	transport	P	Vacuolar protein sorting/targeting protein 10 (Carboxypeptidase Y receptor) (CPY receptor) (Sortilin vps10) (Vacuolar carboxypeptidase sorting receptor vps10)
ruditapes_c15576	transport	transport	P	Vacuolar protein sorting/targeting protein 10 (Carboxypeptidase Y receptor) (CPY receptor) (Sortilin vps10) (Vacuolar carboxypeptidase sorting receptor vps10)
ruditapes_c28560	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_c5984	rRNA processing	RNA metabolism	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_c5984	ribosome biogenesis	other biological processes	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_c12735	translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c12735	tRNA aminoacylation for protein translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c12735	tRNA aminoacylation for protein translation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c12735	asparaginyl-tRNA aminoacylation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c12735	asparaginyl-tRNA aminoacylation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c24998	translation	protein metabolism	P	50S ribosomal protein L10e
ruditapes_c23629	phospholipid biosynthetic process	other metabolic processes	P	"Digeranylgeranylglyceryl phosphate synthase (DGGGP synthase) (DGGGPS) (EC 2.5.1.42) ((S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase) (Geranylgeranylglycerol-phosphate geranylgeranyltransferase)"
ruditapes_c12621	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_c12621	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_c7524	"transcription, DNA-dependent"	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 1 (CHD-1) (EC 3.6.4.12) (ATP-dependent helicase CHD1)
ruditapes_c7524	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 1 (CHD-1) (EC 3.6.4.12) (ATP-dependent helicase CHD1)
ruditapes_c5623	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c5623	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c5623	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_s38426	cellular amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_s38426	leucine biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_s38426	branched chain family amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_s38426	carboxylic acid metabolic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c9550	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c9550	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c9550	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c9550	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c7850	glycine catabolic process	other metabolic processes	P	Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein)
ruditapes_lrc20458	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_lrc20458	methylation	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_lrc20458	dTMP biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c13752	translation	protein metabolism	P	50S ribosomal protein L9
ruditapes2_c2991	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes2_c2991	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes2_c2991	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes2_c2991	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes2_c2991	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c21970	nucleotide-excision repair	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c21970	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c21970	SOS response	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c21970	response to DNA damage stimulus	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c21970	DNA repair	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c21970	DNA repair	DNA metabolism	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c29362	oxidation reduction	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c29362	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c29362	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c29362	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c10621	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c10621	nucleoside metabolic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c7301	cell division	other biological processes	P	Probable GTP-binding protein EngB
ruditapes_c7301	cell cycle	cell cycle and proliferation	P	Probable GTP-binding protein EngB
ruditapes_c7301	barrier septum formation	cell organization and biogenesis	P	Probable GTP-binding protein EngB
ruditapes2_c3427	lysine biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes2_c3427	cellular amino acid biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes2_c3427	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes2_c3427	diaminopimelate biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) (Tetrahydrodipicolinate N-acetyltransferase) (THP acetyltransferase) (Tetrahydropicolinate acetylase)"
ruditapes_c16886	histidine metabolic process	other metabolic processes	P	Urocanate hydratase (Urocanase) (EC 4.2.1.49) (Imidazolonepropionate hydrolase)
ruditapes_c16886	histidine catabolic process	other metabolic processes	P	Urocanate hydratase (Urocanase) (EC 4.2.1.49) (Imidazolonepropionate hydrolase)
ruditapes_lrc16810	glycogen biosynthetic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes_lrc16810	biosynthetic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes_lrc16810	carbohydrate metabolic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes_lrc16810	glycogen metabolic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) (ADP-glucose synthase)
ruditapes_c7241	peptidoglycan biosynthetic process	other metabolic processes	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c7241	regulation of cell shape	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c7241	cell wall organization	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c10476	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c10476	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c27097	cellular amino acid biosynthetic process	other metabolic processes	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_c27097	asparagine biosynthetic process	other metabolic processes	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_c27097	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_c27097	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_lrc31917	lipid biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes_lrc31917	fatty acid biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes_lrc31917	macromolecule biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes_c8358	DNA repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c8358	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c8358	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutS
ruditapes_c8358	mismatch repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c8358	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c21426	cellular amino acid metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c21426	ornithine metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c21426	arginine metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_lrc22411	alanine metabolic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_lrc22411	peptidoglycan biosynthetic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_lrc22411	regulation of cell shape	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_lrc22411	cell wall organization	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c16922	oxidation reduction	other metabolic processes	P	Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster protein) (HCP)
ruditapes_c2943	DNA repair	stress response	P	Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'endonuclease) (Deoxyribonuclease V) (DNase V)
ruditapes_c2943	DNA repair	DNA metabolism	P	Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'endonuclease) (Deoxyribonuclease V) (DNase V)
ruditapes_c2943	response to DNA damage stimulus	stress response	P	Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'endonuclease) (Deoxyribonuclease V) (DNase V)
ruditapes_c17529	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c17529	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c17529	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c17529	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c17529	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c17529	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c18870	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c18870	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c18870	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c18870	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c18870	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes2_c3078	nitrogen fixation	other metabolic processes	P	Nitrogenase-stabilizing/protective protein NifW
ruditapes_lrc13329	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_lrc13329	metabolic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c11508	cobalamin biosynthetic process	other metabolic processes	P	Siroheme synthase [Includes: Uroporphyrinogen-III C-methyltransferase (Urogen III methylase) (EC 2.1.1.107) (SUMT) (Uroporphyrinogen III methylase) (UROM); Precorrin-2 dehydrogenase (EC 1.3.1.76); Sirohydrochlorin ferrochelatase (EC 4.99.1.4)]
ruditapes_c11508	porphyrin biosynthetic process	other metabolic processes	P	Siroheme synthase [Includes: Uroporphyrinogen-III C-methyltransferase (Urogen III methylase) (EC 2.1.1.107) (SUMT) (Uroporphyrinogen III methylase) (UROM); Precorrin-2 dehydrogenase (EC 1.3.1.76); Sirohydrochlorin ferrochelatase (EC 4.99.1.4)]
ruditapes_c11508	methylation	other metabolic processes	P	Siroheme synthase [Includes: Uroporphyrinogen-III C-methyltransferase (Urogen III methylase) (EC 2.1.1.107) (SUMT) (Uroporphyrinogen III methylase) (UROM); Precorrin-2 dehydrogenase (EC 1.3.1.76); Sirohydrochlorin ferrochelatase (EC 4.99.1.4)]
ruditapes_c11508	oxidation reduction	other metabolic processes	P	Siroheme synthase [Includes: Uroporphyrinogen-III C-methyltransferase (Urogen III methylase) (EC 2.1.1.107) (SUMT) (Uroporphyrinogen III methylase) (UROM); Precorrin-2 dehydrogenase (EC 1.3.1.76); Sirohydrochlorin ferrochelatase (EC 4.99.1.4)]
ruditapes_c11508	siroheme biosynthetic process	other metabolic processes	P	Siroheme synthase [Includes: Uroporphyrinogen-III C-methyltransferase (Urogen III methylase) (EC 2.1.1.107) (SUMT) (Uroporphyrinogen III methylase) (UROM); Precorrin-2 dehydrogenase (EC 1.3.1.76); Sirohydrochlorin ferrochelatase (EC 4.99.1.4)]
ruditapes_c11508	metabolic process	other metabolic processes	P	Siroheme synthase [Includes: Uroporphyrinogen-III C-methyltransferase (Urogen III methylase) (EC 2.1.1.107) (SUMT) (Uroporphyrinogen III methylase) (UROM); Precorrin-2 dehydrogenase (EC 1.3.1.76); Sirohydrochlorin ferrochelatase (EC 4.99.1.4)]
ruditapes_lrc35705	methylation	other metabolic processes	P	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT)
ruditapes_lrc35705	pantothenate biosynthetic process	other metabolic processes	P	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT)
ruditapes_c11981	lipid biosynthetic process	other metabolic processes	P	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (EC 2.7.8.30) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase)
ruditapes_c11981	lipopolysaccharide biosynthetic process	other metabolic processes	P	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (EC 2.7.8.30) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase)
ruditapes_c11981	response to antibiotic	other biological processes	P	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (EC 2.7.8.30) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase)
ruditapes_c11981	lipid A biosynthetic process	other metabolic processes	P	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (EC 2.7.8.30) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase)
ruditapes_c30867	cell division	other biological processes	P	Spastin (EC 3.6.4.3)
ruditapes_c30867	cell cycle	cell cycle and proliferation	P	Spastin (EC 3.6.4.3)
ruditapes_c30867	microtubule severing	other biological processes	P	Spastin (EC 3.6.4.3)
ruditapes2_lrc3170	glucan biosynthetic process	other metabolic processes	P	Phosphoglycerol transferase I (EC 2.7.8.20) (Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase)
ruditapes2_lrc3170	metabolic process	other metabolic processes	P	Phosphoglycerol transferase I (EC 2.7.8.20) (Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase)
ruditapes_s35672	lipid biosynthetic process	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_s35672	lipid A biosynthetic process	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_s35672	phosphorylation	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_c19416	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c19416	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c19416	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes2_c5467	cell division	other biological processes	P	Macrodomain Ter protein
ruditapes2_c5983	cell division	other biological processes	P	Macrodomain Ter protein
ruditapes2_c5467	cell cycle	cell cycle and proliferation	P	Macrodomain Ter protein
ruditapes2_c5983	cell cycle	cell cycle and proliferation	P	Macrodomain Ter protein
ruditapes_c23481	tRNA aminoacylation for protein translation	protein metabolism	P	"Probable aspartate--tRNA ligase, cytoplasmic (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)"
ruditapes_c23481	tRNA aminoacylation for protein translation	RNA metabolism	P	"Probable aspartate--tRNA ligase, cytoplasmic (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)"
ruditapes_c23481	translation	protein metabolism	P	"Probable aspartate--tRNA ligase, cytoplasmic (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)"
ruditapes_c23481	aspartyl-tRNA aminoacylation	protein metabolism	P	"Probable aspartate--tRNA ligase, cytoplasmic (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)"
ruditapes_c23481	aspartyl-tRNA aminoacylation	RNA metabolism	P	"Probable aspartate--tRNA ligase, cytoplasmic (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)"
ruditapes2_c4000	isoleucyl-tRNA aminoacylation	protein metabolism	P	"Probable isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes2_c4000	tRNA aminoacylation for protein translation	protein metabolism	P	"Probable isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes2_c4000	tRNA aminoacylation for protein translation	RNA metabolism	P	"Probable isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes2_c4000	isoleucyl-tRNA aminoacylation	RNA metabolism	P	"Probable isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes2_c4000	translation	protein metabolism	P	"Probable isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes2_c2334	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 112
ruditapes2_c2334	cell surface receptor linked signal transduction	signal transduction	P	Probable G-protein coupled receptor 112
ruditapes2_c2334	neuropeptide signaling pathway	signal transduction	P	Probable G-protein coupled receptor 112
ruditapes2_c2334	signal transduction	signal transduction	P	Probable G-protein coupled receptor 112
ruditapes2_c2334	biological_process	other biological processes	P	Probable G-protein coupled receptor 112
ruditapes_c2519	oxidation reduction	other metabolic processes	P	"Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial (EC 1.1.99.-)"
ruditapes_lrc12538	oxidation reduction	other metabolic processes	P	"Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial (EC 1.1.99.-)"
ruditapes_c12714	tRNA processing	RNA metabolism	P	tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase)
ruditapes_lrc9236	cell morphogenesis	cell organization and biogenesis	P	Probable septum site-determining protein MinC
ruditapes_lrc9236	regulation of cell cycle	cell cycle and proliferation	P	Probable septum site-determining protein MinC
ruditapes_lrc9236	cell division	other biological processes	P	Probable septum site-determining protein MinC
ruditapes_lrc9236	cell cycle	cell cycle and proliferation	P	Probable septum site-determining protein MinC
ruditapes_lrc9236	barrier septum formation	cell organization and biogenesis	P	Probable septum site-determining protein MinC
ruditapes_lrc9236	regulation of cell division	other biological processes	P	Probable septum site-determining protein MinC
ruditapes_c8924	protein modification process	protein metabolism	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes_c8924	lipoate biosynthetic process	other metabolic processes	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes_c15688	organic acid metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c15688	metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c15688	phosphorylation	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes2_lrc6848	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes2_lrc6848	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes2_lrc6848	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c3608	ATP biosynthetic process	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c3608	ion transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c3608	proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c3608	transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c3608	ATP synthesis coupled proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c3608	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c21167	ATP biosynthetic process	other metabolic processes	P	V-type proton ATPase subunit E (V-ATPase subunit E)
ruditapes_c21167	ion transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E)
ruditapes_c21167	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E)
ruditapes_c21167	transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E)
ruditapes_c21167	proton transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E)
ruditapes_lrc29865	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_lrc29865	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_lrc29865	histidyl-tRNA aminoacylation	protein metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_lrc29865	histidyl-tRNA aminoacylation	RNA metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_lrc29865	tRNA aminoacylation for protein translation	protein metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_lrc29865	tRNA aminoacylation for protein translation	RNA metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes2_lrc3163	transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_lrc3163	ATP synthesis coupled proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_lrc3163	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_lrc3163	proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_lrc3163	ATP biosynthetic process	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_lrc3163	ion transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c14736	DNA repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c14736	DNA repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c14736	response to DNA damage stimulus	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c14736	metabolic process	other metabolic processes	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c14736	base-excision repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c14736	base-excision repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c28167	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (BPG-dependent PGAM) (PGAM) (Phosphoglyceromutase) (dPGM) (EC 5.4.2.1)"
ruditapes_c28167	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (BPG-dependent PGAM) (PGAM) (Phosphoglyceromutase) (dPGM) (EC 5.4.2.1)"
ruditapes_c23355	pyridine nucleotide biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c23355	NAD biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c23355	nicotinate nucleotide biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c27642	mRNA catabolic process	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes_c27642	RNA processing	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes_c12437	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12437	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12437	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12437	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12437	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_lrc8505	cellular amino acid biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_lrc8505	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes2_c3742	biosynthetic process	other metabolic processes	P	LL-diaminopimelate aminotransferase (DAP-AT) (DAP-aminotransferase) (LL-DAP-aminotransferase) (EC 2.6.1.83)
ruditapes2_c3742	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	LL-diaminopimelate aminotransferase (DAP-AT) (DAP-aminotransferase) (LL-DAP-aminotransferase) (EC 2.6.1.83)
ruditapes_c4234	translation	protein metabolism	P	Elongation factor G (EF-G)
ruditapes_c4234	translational elongation	protein metabolism	P	Elongation factor G (EF-G)
ruditapes_c4234	GTP catabolic process	other metabolic processes	P	Elongation factor G (EF-G)
ruditapes_c13718	metabolic process	other metabolic processes	P	L-arabinose isomerase (EC 5.3.1.4)
ruditapes_c13718	carbohydrate metabolic process	other metabolic processes	P	L-arabinose isomerase (EC 5.3.1.4)
ruditapes_c13718	arabinose catabolic process	other metabolic processes	P	L-arabinose isomerase (EC 5.3.1.4)
ruditapes_c13718	monosaccharide metabolic process	other metabolic processes	P	L-arabinose isomerase (EC 5.3.1.4)
ruditapes_c13718	fucose metabolic process	other metabolic processes	P	L-arabinose isomerase (EC 5.3.1.4)
ruditapes2_c3738	translation	protein metabolism	P	30S ribosomal protein S3
ruditapes_c14002	cellular amino acid biosynthetic process	other metabolic processes	P	3-dehydroquinate synthase (EC 4.2.3.4)
ruditapes_c14002	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-dehydroquinate synthase (EC 4.2.3.4)
ruditapes_s35664	pyrroloquinoline quinone biosynthetic process	protein metabolism	P	Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone biosynthesis protein E)
ruditapes_c10799	tRNA aminoacylation for protein translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c10799	tRNA aminoacylation for protein translation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c10799	tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c10799	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c10799	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c10799	translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c18236	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit omega (RNAP omega subunit) (EC 2.7.7.6) (RNA polymerase omega subunit) (Transcriptase subunit omega)
ruditapes_c10364	ATP metabolic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c10364	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c10364	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c10364	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c10364	proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c10364	ATP hydrolysis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c10364	ion transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c10364	transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c23399	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c23399	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c23399	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c17016	cellular amino acid biosynthetic process	other metabolic processes	P	3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase)
ruditapes_c17016	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase)
ruditapes_c16888	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c16888	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c16888	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c16888	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c16888	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes2_c7352	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes2_c7352	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes2_c7352	cellular amino acid metabolic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes2_c2207	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c2207	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c2207	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c2207	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c2207	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c3856	thiamin biosynthetic process	other metabolic processes	P	Thiamine-phosphate synthase (TP synthase) (TPS) (EC 2.5.1.3) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
ruditapes_s36579	thiamin biosynthetic process	other metabolic processes	P	Thiamine-phosphate synthase (TP synthase) (TPS) (EC 2.5.1.3) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
ruditapes_c26792	protein folding	protein metabolism	P	Urease accessory protein UreE
ruditapes_c26792	enzyme active site formation	protein metabolism	P	Urease accessory protein UreE
ruditapes_c26792	protein complex assembly	cell organization and biogenesis	P	Urease accessory protein UreE
ruditapes_c26792	urea metabolic process	other metabolic processes	P	Urease accessory protein UreE
ruditapes_c23585	response to stress	stress response	P	ATP-dependent protease ATPase subunit HslU (Unfoldase HslU)
ruditapes_c23585	ATP catabolic process	other metabolic processes	P	ATP-dependent protease ATPase subunit HslU (Unfoldase HslU)
ruditapes_c7875	photosynthesis	other metabolic processes	P	Photosystem I assembly protein ycf3
ruditapes_c16108	glucose catabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c16108	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c16108	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c4715	RNA processing	RNA metabolism	P	Ribonuclease PH (RNase PH) (EC 2.7.7.56) (tRNA nucleotidyltransferase)
ruditapes_c4715	tRNA processing	RNA metabolism	P	Ribonuclease PH (RNase PH) (EC 2.7.7.56) (tRNA nucleotidyltransferase)
ruditapes_c15173	DNA repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c15173	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c1736	DNA repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c1736	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c15173	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutS
ruditapes_c1736	mismatch repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c1736	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c15173	mismatch repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c15173	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c1736	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutS
ruditapes_c30322	double-strand break repair via homologous recombination	stress response	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_c30322	double-strand break repair via homologous recombination	DNA metabolism	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_c30322	DNA repair	stress response	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_c30322	DNA repair	DNA metabolism	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_c30322	response to DNA damage stimulus	stress response	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_c1960	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c1960	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c1960	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c1960	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c5927	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c5927	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c5927	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c13311	glutamine metabolic process	other metabolic processes	P	Glutaminase (EC 3.5.1.2)
ruditapes_c13524	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c13524	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c13524	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c13524	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c13524	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c23049	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 25 (U3 snoRNA-associated protein 25) (U three protein 25)
ruditapes_c23049	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 25 (U3 snoRNA-associated protein 25) (U three protein 25)
ruditapes_c21338	proteolysis	protein metabolism	P	Probable zinc metalloprotease AFLA
ruditapes_c23682	D-xylose metabolic process	other metabolic processes	P	Probable D-xylulose kinase A (Xylulokinase A) (EC 2.7.1.17)
ruditapes_c23682	phosphorylation	other metabolic processes	P	Probable D-xylulose kinase A (Xylulokinase A) (EC 2.7.1.17)
ruditapes_c23682	carbohydrate metabolic process	other metabolic processes	P	Probable D-xylulose kinase A (Xylulokinase A) (EC 2.7.1.17)
ruditapes_c24872	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes2_c4118	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes_c10115	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes_c484	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes2_c725	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes_c19819	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes_c10463	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes2_c4894	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes2_c4471	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes_c27709	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes_c13200	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes2_c5063	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes2_c2517	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes_c11253	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes_lrc33658	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-2
ruditapes_c1947	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Basic leucine zipper 63 (AtbZIP63) (bZIP protein 63) (Basic leucine zipper OPAQUE 2 homolog 3) (Basic leucine zipper O2 homolog 3)
ruditapes_c27485	tyrosyl-tRNA aminoacylation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c27485	tyrosyl-tRNA aminoacylation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c27485	translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c27485	tRNA aminoacylation for protein translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c27485	tRNA aminoacylation for protein translation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c7489	menaquinone biosynthetic process	other metabolic processes	P	Demethylmenaquinone methyltransferase (EC 2.1.1.163) (Menaquinone biosynthesis methyltransferase ubiE)
ruditapes_c7489	methylation	other metabolic processes	P	Demethylmenaquinone methyltransferase (EC 2.1.1.163) (Menaquinone biosynthesis methyltransferase ubiE)
ruditapes_c14944	transcription initiation	RNA metabolism	P	UPF0122 protein Sca
ruditapes_c14944	transcription initiation	cell organization and biogenesis	P	UPF0122 protein Sca
ruditapes_c14944	"regulation of transcription, DNA-dependent"	RNA metabolism	P	UPF0122 protein Sca
ruditapes_c25689	cell division	other biological processes	P	Segregation and condensation protein A
ruditapes_c25689	chromosome segregation	other biological processes	P	Segregation and condensation protein A
ruditapes_c25689	cell cycle	cell cycle and proliferation	P	Segregation and condensation protein A
ruditapes2_c3430	cell cycle	cell cycle and proliferation	P	Tyrosine recombinase XerS
ruditapes2_c3430	chromosome segregation	other biological processes	P	Tyrosine recombinase XerS
ruditapes2_c3430	cell division	other biological processes	P	Tyrosine recombinase XerS
ruditapes2_c3430	DNA integration	DNA metabolism	P	Tyrosine recombinase XerS
ruditapes2_c3430	DNA recombination	DNA metabolism	P	Tyrosine recombinase XerS
ruditapes_s38145	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_s38145	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_s38145	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_s38145	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_s38145	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_s38145	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c17029	biosynthetic process	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c17029	methylation	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c17029	translation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c17029	translational initiation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes2_c367	regulation of cell shape	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_c367	cell wall organization	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_c367	peptidoglycan biosynthetic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_c367	alanine metabolic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c10716	response to DNA damage stimulus	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_c10716	DNA repair	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_c10716	DNA repair	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_c10716	SOS response	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_c10716	DNA recombination	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_lrc21966	queuosine biosynthetic process	RNA metabolism	P	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA)
ruditapes2_c2318	organic acid metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes2_c2318	metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes2_c2318	phosphorylation	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c24051	cell division	other biological processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c24051	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c24051	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c24051	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c24051	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c24051	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c16167	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c16167	ion transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c16167	transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c16167	ATP hydrolysis coupled proton transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c16167	proton transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c16167	ATP metabolic process	other metabolic processes	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c16167	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c16167	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c20581	purine ribonucleoside salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c20581	nucleoside metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c20581	xanthine metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c20581	purine salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c30071	transmembrane iron ion transport	transport	P	"Solute carrier family 40 member 3, chloroplastic"
ruditapes_c28543	lipid biosynthetic process	other metabolic processes	P	Acetyl-CoA carboxylase 2 (EC 6.4.1.2) [Includes: Biotin carboxylase (EC 6.3.4.14)]
ruditapes_c28543	metabolic process	other metabolic processes	P	Acetyl-CoA carboxylase 2 (EC 6.4.1.2) [Includes: Biotin carboxylase (EC 6.3.4.14)]
ruditapes_c28543	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-CoA carboxylase 2 (EC 6.4.1.2) [Includes: Biotin carboxylase (EC 6.3.4.14)]
ruditapes_c13030	lipoate biosynthetic process	other metabolic processes	P	"Lipoyl synthase 1, chloroplastic (EC 2.8.1.8) (Lipoate synthase 1) (LS 1) (Lip-syn 1) (Lipoate synthase, plastidial 1) (LIP1p 1) (Lipoic acid synthase 1)"
ruditapes_c3254	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c3254	carbohydrate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c3254	phosphorylation	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c3254	glycerol metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c12789	tetrahydrobiopterin biosynthetic process	other metabolic processes	P	Putative pterin-4-alpha-carbinolamine dehydratase (PHS) (EC 4.2.1.96) (4-alpha-hydroxy-tetrahydropterin dehydratase) (Pterin carbinolamine dehydratase) (PCD)
ruditapes_c2989	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c2989	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c2989	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c2989	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c2989	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c2989	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c20382	methylation	other metabolic processes	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c20382	rRNA modification	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c20382	rRNA methylation	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c20382	rRNA processing	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_s37749	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_c9938	tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c9938	translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c9938	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c9938	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c9938	tRNA aminoacylation for protein translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c9938	tRNA aminoacylation for protein translation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c21815	gluconeogenesis	other metabolic processes	P	Phosphoenolpyruvate carboxykinase [ATP] (PEP carboxykinase) (PEPCK) (EC 4.1.1.49) (Phosphoenolpyruvate carboxylase)
ruditapes2_c4393	queuosine biosynthetic process	RNA metabolism	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes2_c4393	oxidation reduction	other metabolic processes	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c30356	base-excision repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c30356	base-excision repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c30356	metabolic process	other metabolic processes	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c30356	response to DNA damage stimulus	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c30356	DNA repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c30356	DNA repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes2_c2627	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes2_c2627	protein import	transport	P	Protein translocase subunit SecA
ruditapes2_c2627	protein transport	transport	P	Protein translocase subunit SecA
ruditapes2_c2627	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes2_c2627	transport	transport	P	Protein translocase subunit SecA
ruditapes_c27688	lipoate biosynthetic process	other metabolic processes	P	Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA)
ruditapes_c15673	translational termination	protein metabolism	P	Peptide chain release factor 2 (RF-2)
ruditapes_c15673	translational termination	cell organization and biogenesis	P	Peptide chain release factor 2 (RF-2)
ruditapes_c15673	translation	protein metabolism	P	Peptide chain release factor 2 (RF-2)
ruditapes2_c2311	translation	protein metabolism	P	50S ribosomal protein L32
ruditapes2_lrc6837	translation	protein metabolism	P	30S ribosomal protein S3
ruditapes_c22533	translation	protein metabolism	P	50S ribosomal protein L10e
ruditapes_s33264	cell division	other biological processes	P	Probable GTP-binding protein EngB
ruditapes_s33264	barrier septum formation	cell organization and biogenesis	P	Probable GTP-binding protein EngB
ruditapes_s33264	cell cycle	cell cycle and proliferation	P	Probable GTP-binding protein EngB
ruditapes_c18273	cellular amino acid biosynthetic process	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes_c18273	proline biosynthetic process	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes_c18273	phosphorylation	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes_c13595	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c13595	cell division	other biological processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c13595	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c13595	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c13595	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c13595	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_lrc36696	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36696	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36696	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36696	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc36696	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes2_c2854	aromatic amino acid family biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes2_c2854	cellular amino acid biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes2_c2854	metabolic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes2_c2854	tryptophan biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes2_c1224	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase)
ruditapes_c24587	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c24587	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c10906	translation	protein metabolism	P	50S ribosomal protein L28
ruditapes_c17605	biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_c17605	glucan biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_c17605	glycogen biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_s39901	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_s39901	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_s39901	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c12547	ATP catabolic process	other metabolic processes	P	ATPase GET3 (EC 3.6.-.-) (Arsenical pump-driving ATPase) (Arsenite-stimulated ATPase) (Golgi to ER traffic protein 3) (Guided entry of tail-anchored proteins 3)
ruditapes_c12547	transport	transport	P	ATPase GET3 (EC 3.6.-.-) (Arsenical pump-driving ATPase) (Arsenite-stimulated ATPase) (Golgi to ER traffic protein 3) (Guided entry of tail-anchored proteins 3)
ruditapes_c13341	oxidation reduction	other metabolic processes	P	Probable metalloreductase AIM14 (EC 1.16.1.-)
ruditapes_c13341	electron transport chain	other metabolic processes	P	Probable metalloreductase AIM14 (EC 1.16.1.-)
ruditapes_c13341	ion transport	transport	P	Probable metalloreductase AIM14 (EC 1.16.1.-)
ruditapes_c13341	transport	transport	P	Probable metalloreductase AIM14 (EC 1.16.1.-)
ruditapes2_lrc6730	phosphorylation	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes2_lrc6730	metabolic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes2_lrc6730	cellular amino acid biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes2_lrc6730	oxidation reduction	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes2_lrc6730	aromatic amino acid family biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes2_c3051	response to antibiotic	other biological processes	P	Phosphatidylglycerol lysyltransferase (EC 2.3.2.3) (Lysylphosphatidylglycerol synthase) (LPG synthase)
ruditapes_c6058	response to antibiotic	other biological processes	P	Phosphatidylglycerol lysyltransferase (EC 2.3.2.3) (Lysylphosphatidylglycerol synthase) (LPG synthase)
ruditapes2_c3051	lipid metabolic process	other metabolic processes	P	Phosphatidylglycerol lysyltransferase (EC 2.3.2.3) (Lysylphosphatidylglycerol synthase) (LPG synthase)
ruditapes_c6058	lipid metabolic process	other metabolic processes	P	Phosphatidylglycerol lysyltransferase (EC 2.3.2.3) (Lysylphosphatidylglycerol synthase) (LPG synthase)
ruditapes_c12900	lipid metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase D LvSicTox-alphaIC1bv (SMD) (SMase D) (Sphingomyelinase D) (EC 3.1.4.41) (Fragment)
ruditapes_c12900	cytolysis	death	P	Sphingomyelin phosphodiesterase D LvSicTox-alphaIC1bv (SMD) (SMase D) (Sphingomyelinase D) (EC 3.1.4.41) (Fragment)
ruditapes_c28797	lipid metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase D LspiSicTox-betaIE2i (SMD) (SMase D) (Sphingomyelinase D) (EC 3.1.4.41) (Fragment)
ruditapes_c13135	lipid metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase D LafSicTox-betaIE1 (SMD) (SMase D) (Sphingomyelinase D) (EC 3.1.4.41) (Fragment)
ruditapes_c19439	angiogenesis	developmental processes	P	Snake venom vascular endothelial growth factor toxin (svVEGF) (Barietin)
ruditapes_c19439	cell differentiation	other biological processes	P	Snake venom vascular endothelial growth factor toxin (svVEGF) (Barietin)
ruditapes_c19439	multicellular organismal development	developmental processes	P	Snake venom vascular endothelial growth factor toxin (svVEGF) (Barietin)
ruditapes_c19439	positive regulation of cell division	other biological processes	P	Snake venom vascular endothelial growth factor toxin (svVEGF) (Barietin)
ruditapes2_c7159	phosphorylation	other metabolic processes	P	Probable LRR receptor-like serine/threonine-protein kinase At1g12460 (EC 2.7.11.1)
ruditapes2_c7159	protein amino acid phosphorylation	protein metabolism	P	Probable LRR receptor-like serine/threonine-protein kinase At1g12460 (EC 2.7.11.1)
ruditapes_c8844	protein amino acid phosphorylation	protein metabolism	P	Probable LRR receptor-like serine/threonine-protein kinase At4g20940 (EC 2.7.11.1)
ruditapes_c8844	phosphorylation	other metabolic processes	P	Probable LRR receptor-like serine/threonine-protein kinase At4g20940 (EC 2.7.11.1)
ruditapes_c1808	phosphorylation	other metabolic processes	P	LRR receptor-like serine/threonine-protein kinase RCH1 (EC 2.7.11.1) (Protein ROOT CLAVATA-HOMOLOG1 1)
ruditapes_c1808	protein amino acid phosphorylation	protein metabolism	P	LRR receptor-like serine/threonine-protein kinase RCH1 (EC 2.7.11.1) (Protein ROOT CLAVATA-HOMOLOG1 1)
ruditapes_c5460	rRNA processing	RNA metabolism	P	Ribosome maturation factor RimM
ruditapes_c5460	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimM
ruditapes_c27544	glucuronate catabolic process	other metabolic processes	P	Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase) (Uronic isomerase)
ruditapes_c8786	"nucleobase, nucleoside and nucleotide interconversion"	other metabolic processes	P	Pyrimidine-specific ribonucleoside hydrolase RihA (EC 3.2.-.-) (Cytidine/uridine-specific hydrolase)
ruditapes_c8786	pyrimidine base metabolic process	other metabolic processes	P	Pyrimidine-specific ribonucleoside hydrolase RihA (EC 3.2.-.-) (Cytidine/uridine-specific hydrolase)
ruditapes_c8786	metabolic process	other metabolic processes	P	Pyrimidine-specific ribonucleoside hydrolase RihA (EC 3.2.-.-) (Cytidine/uridine-specific hydrolase)
ruditapes_c5167	pentose-phosphate shunt	other metabolic processes	P	6-phosphogluconolactonase (6-P-gluconolactonase) (EC 3.1.1.31)
ruditapes_c5167	carbohydrate metabolic process	other metabolic processes	P	6-phosphogluconolactonase (6-P-gluconolactonase) (EC 3.1.1.31)
ruditapes_c5167	glucose metabolic process	other metabolic processes	P	6-phosphogluconolactonase (6-P-gluconolactonase) (EC 3.1.1.31)
ruditapes_c3806	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c3806	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c22113	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c22113	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c22113	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c22113	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c22113	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c2888	fatty acid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes_c2888	metabolic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes_c2888	lipid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes2_lrc3231	response to oxidative stress	stress response	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes_c5180	response to oxidative stress	stress response	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes_c5180	hydrogen peroxide catabolic process	stress response	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes_c5180	hydrogen peroxide catabolic process	other metabolic processes	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes2_lrc3231	hydrogen peroxide catabolic process	stress response	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes2_lrc3231	hydrogen peroxide catabolic process	other metabolic processes	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes2_lrc3231	oxidation reduction	other metabolic processes	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes_c5180	oxidation reduction	other metabolic processes	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes_c27380	threonine biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes_c27380	phosphorylation	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes_c27380	cellular amino acid biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes_c27380	threonine metabolic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes_c11982	translation	protein metabolism	P	50S ribosomal protein L2
ruditapes_c3117	mismatch repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c3117	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c3117	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutL
ruditapes_c3117	DNA repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c3117	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c11444	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c11444	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c11444	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c11444	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c11444	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c11444	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c29045	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c29045	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c29045	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c15513	terpenoid biosynthetic process	other metabolic processes	P	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) (MECPP-synthase) (MECPS) (EC 4.6.1.12)"
ruditapes_c15513	isoprenoid biosynthetic process	other metabolic processes	P	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) (MECPP-synthase) (MECPS) (EC 4.6.1.12)"
ruditapes_c19970	SOS response	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c19970	DNA recombination	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c19970	response to DNA damage stimulus	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c19970	DNA repair	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c19970	DNA repair	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c24779	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c24779	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c24779	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c28660	transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c28660	ion transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c28660	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c28660	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c28660	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c28660	ATP metabolic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c28660	proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c28660	ATP hydrolysis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_lrc17246	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc17246	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc17246	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc17246	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c15020	heme biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c15020	porphyrin biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c31253	chemotaxis	other biological processes	P	Putative methyl-accepting chemotaxis protein YoaH
ruditapes_c31253	signal transduction	signal transduction	P	Putative methyl-accepting chemotaxis protein YoaH
ruditapes_c21634	metabolic process	other metabolic processes	P	"Pullulanase (EC 3.2.1.41) (Alpha-dextrin endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase)"
ruditapes_c21634	carbohydrate metabolic process	other metabolic processes	P	"Pullulanase (EC 3.2.1.41) (Alpha-dextrin endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase)"
ruditapes_c25197	cell division	other biological processes	P	Ftsk domain-containing protein YukB
ruditapes_c25197	chromosome segregation	other biological processes	P	Ftsk domain-containing protein YukB
ruditapes_c25197	cell cycle	cell cycle and proliferation	P	Ftsk domain-containing protein YukB
ruditapes_c15590	metabolic process	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_c15590	phosphorylation	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_c15590	two-component signal transduction system (phosphorelay)	signal transduction	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_c15590	carbohydrate metabolic process	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_c15590	protein amino acid phosphorylation	protein metabolism	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_c15590	regulation of carbohydrate metabolic process	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_c10695	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit K (EC 1.6.99.5) (NADH dehydrogenase I subunit K) (NDH-1 subunit K)
ruditapes_c10695	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-quinone oxidoreductase subunit K (EC 1.6.99.5) (NADH dehydrogenase I subunit K) (NDH-1 subunit K)
ruditapes_c10695	transport	transport	P	NADH-quinone oxidoreductase subunit K (EC 1.6.99.5) (NADH dehydrogenase I subunit K) (NDH-1 subunit K)
ruditapes_c8330	DNA repair	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c8330	DNA repair	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c8330	response to DNA damage stimulus	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c8330	DNA recombination	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_lrc29317	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc29317	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc29317	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc29317	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c16087	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c16087	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c16087	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c19864	purine salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c19864	xanthine metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c19864	purine ribonucleoside salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c19864	nucleoside metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c30687	metabolic process	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_c30687	phosphorylation	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_lrc17775	regulation of autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_c1446	autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_lrc17775	mitochondrion degradation	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_lrc17775	autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_c1446	mitochondrion degradation	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes2_c6490	multicellular organismal aging	developmental processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_lrc37493	multicellular organismal aging	developmental processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes2_c3675	regulation of autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_c1446	regulation of autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes2_c3675	autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_lrc17775	multicellular organismal aging	developmental processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_lrc37493	mitochondrion degradation	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes2_c6490	autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes2_c6490	mitochondrion degradation	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_lrc37493	autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_lrc37493	regulation of autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes2_c3675	multicellular organismal aging	developmental processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes2_c6490	regulation of autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_c1446	multicellular organismal aging	developmental processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes2_c3675	mitochondrion degradation	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2
ruditapes_c3658	glucuronate catabolic process	other metabolic processes	P	Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase) (Uronic isomerase)
ruditapes_c14725	nucleoside metabolic process	other metabolic processes	P	Purine nucleoside phosphorylase DeoD-type (PNP) (EC 2.4.2.1)
ruditapes_c14725	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Purine nucleoside phosphorylase DeoD-type (PNP) (EC 2.4.2.1)
ruditapes_c6400	glycine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c6400	one-carbon compound metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c6400	cellular amino acid biosynthetic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c6400	L-serine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c24840	translation	protein metabolism	P	50S ribosomal protein L14
ruditapes_c8191	porphyrin biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c8191	heme biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c10301	tRNA aminoacylation for protein translation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c10301	asparaginyl-tRNA aminoacylation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c10301	asparaginyl-tRNA aminoacylation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c10301	translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c10301	tRNA aminoacylation for protein translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c12009	DNA topological change	DNA metabolism	P	DNA gyrase subunit A (EC 5.99.1.3)
ruditapes_c12009	DNA metabolic process	DNA metabolism	P	DNA gyrase subunit A (EC 5.99.1.3)
ruditapes_c8785	sulfate assimilation	other metabolic processes	P	Adenylyl-sulfate kinase (EC 2.7.1.25) (APS kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) (Adenosine-5'-phosphosulfate kinase)
ruditapes_c8785	phosphorylation	other metabolic processes	P	Adenylyl-sulfate kinase (EC 2.7.1.25) (APS kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) (Adenosine-5'-phosphosulfate kinase)
ruditapes_c29607	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-dehydroquinate synthase (EC 4.2.3.4)
ruditapes_c29607	cellular amino acid biosynthetic process	other metabolic processes	P	3-dehydroquinate synthase (EC 4.2.3.4)
ruditapes_c29408	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c29408	rRNA methylation	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c29408	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes2_c743	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes2_c743	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes2_c743	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c9442	cellular amino acid biosynthetic process	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c9442	aromatic amino acid family biosynthetic process	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c9442	oxidation reduction	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c1359	translational elongation	protein metabolism	P	Elongation factor G (EF-G)
ruditapes_c1359	translation	protein metabolism	P	Elongation factor G (EF-G)
ruditapes_c1359	GTP catabolic process	other metabolic processes	P	Elongation factor G (EF-G)
ruditapes_s40436	cellular amino acid biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_s40436	aromatic amino acid family biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c12068	urea metabolic process	other metabolic processes	P	Urease accessory protein UreE
ruditapes_c12068	protein complex assembly	cell organization and biogenesis	P	Urease accessory protein UreE
ruditapes_c12068	protein folding	protein metabolism	P	Urease accessory protein UreE
ruditapes_c12068	enzyme active site formation	protein metabolism	P	Urease accessory protein UreE
ruditapes_s39639	translation	protein metabolism	P	50S ribosomal protein L27
ruditapes_c28884	translation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_c28884	GTP catabolic process	other metabolic processes	P	Translation initiation factor IF-2
ruditapes_c28884	translational initiation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_c26456	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c26456	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c26456	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c26456	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c10238	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)
ruditapes_c10238	lipid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)
ruditapes_c17382	flagellum assembly	cell organization and biogenesis	P	Flagellar assembly factor FliW
ruditapes_c17382	flagellum organization	cell organization and biogenesis	P	Flagellar assembly factor FliW
ruditapes_c10903	cyanate metabolic process	other metabolic processes	P	Cyanate hydratase (Cyanase) (EC 4.2.1.104) (Cyanate hydrolase) (Cyanate lyase)
ruditapes2_c710	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_s37414	DNA repair	stress response	P	Structure-specific endonuclease subunit SLX1 (EC 3.6.1.-)
ruditapes_s37414	DNA repair	DNA metabolism	P	Structure-specific endonuclease subunit SLX1 (EC 3.6.1.-)
ruditapes_s37414	DNA recombination	DNA metabolism	P	Structure-specific endonuclease subunit SLX1 (EC 3.6.1.-)
ruditapes_s37414	response to DNA damage stimulus	stress response	P	Structure-specific endonuclease subunit SLX1 (EC 3.6.1.-)
ruditapes_c7047	protein transport	transport	P	Tethering factor for nuclear proteasome STS1
ruditapes_c7047	transport	transport	P	Tethering factor for nuclear proteasome STS1
ruditapes_c29675	transport	transport	P	"Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit (Dihydroorotate oxidase B, electron transfer subunit)"
ruditapes_c29675	oxidation reduction	other metabolic processes	P	"Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit (Dihydroorotate oxidase B, electron transfer subunit)"
ruditapes_c29675	electron transport chain	other metabolic processes	P	"Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit (Dihydroorotate oxidase B, electron transfer subunit)"
ruditapes_c29675	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	"Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit (Dihydroorotate oxidase B, electron transfer subunit)"
ruditapes_c8956	lipoate biosynthetic process	other metabolic processes	P	Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA)
ruditapes2_lrc5287	mismatch repair	stress response	P	MutS2 protein
ruditapes2_lrc5287	mismatch repair	DNA metabolism	P	MutS2 protein
ruditapes2_lrc5287	maintenance of fidelity during DNA-dependent DNA replication	DNA metabolism	P	MutS2 protein
ruditapes_c12354	cell division	other biological processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c12354	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c12354	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c12354	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c12354	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c12354	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_lrc7484	protein arginylation	protein metabolism	P	Putative arginyl-tRNA--protein transferase (Arginyltransferase) (R-transferase) (EC 2.3.2.8)
ruditapes_s36701	protein arginylation	protein metabolism	P	Putative arginyl-tRNA--protein transferase (Arginyltransferase) (R-transferase) (EC 2.3.2.8)
ruditapes2_c2711	tRNA processing	RNA metabolism	P	tRNA(Ile)-lysidine synthase (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase)
ruditapes_c8489	lipid biosynthetic process	other metabolic processes	P	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine acyltransferase) (EC 2.3.1.129)
ruditapes_c8489	lipid A biosynthetic process	other metabolic processes	P	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine acyltransferase) (EC 2.3.1.129)
ruditapes_c19814	arginine metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c19814	ornithine metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c19814	cellular amino acid metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes2_c265	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes2_c265	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes2_c265	glucose catabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes2_lrc5749	proteolysis	protein metabolism	P	Lipoprotein signal peptidase (EC 3.4.23.36) (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)
ruditapes_c7265	arginine biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c7265	oxidation reduction	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c7265	cellular amino acid metabolic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c7265	cellular amino acid biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c17818	translation	protein metabolism	P	50S ribosomal protein L34e
ruditapes_c12045	DNA repair	stress response	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c12045	DNA repair	DNA metabolism	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c12045	methylation	other metabolic processes	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c12045	response to DNA damage stimulus	stress response	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_s33920	DNA topological change	DNA metabolism	P	Type 2 DNA topoisomerase 6 subunit B (EC 5.99.1.3) (Type II DNA topoisomerase VI subunit B) (TopoVI-B)
ruditapes_c24217	lipoate biosynthetic process	other metabolic processes	P	Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA)
ruditapes_lrc27849	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_lrc27849	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_lrc27849	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_lrc27849	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_lrc27849	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_lrc27849	cell division	other biological processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c14863	methionine biosynthetic process	other metabolic processes	P	"Enolase-phosphatase E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane phosphatase)"
ruditapes_c14863	methionine salvage	other metabolic processes	P	"Enolase-phosphatase E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane phosphatase)"
ruditapes_c14863	cellular amino acid biosynthetic process	other metabolic processes	P	"Enolase-phosphatase E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane phosphatase)"
ruditapes_c13184	regulation of translational fidelity	protein metabolism	P	"Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial (Glu-AdT subunit C) (EC 6.3.5.-)"
ruditapes_c13184	translation	protein metabolism	P	"Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial (Glu-AdT subunit C) (EC 6.3.5.-)"
ruditapes_c29765	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)
ruditapes_c29765	'de novo' IMP biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)
ruditapes_c32055	ubiquinone biosynthetic process	other metabolic processes	P	3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) (Polyprenyl p-hydroxybenzoate decarboxylase)
ruditapes_c4962	"transcription, DNA-dependent"	RNA metabolism	P	Flagellar transcriptional regulator FlhC
ruditapes_c4962	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Flagellar transcriptional regulator FlhC
ruditapes_c4962	regulation of flagellum assembly	cell organization and biogenesis	P	Flagellar transcriptional regulator FlhC
ruditapes_c4962	flagellum organization	cell organization and biogenesis	P	Flagellar transcriptional regulator FlhC
ruditapes_c4962	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Flagellar transcriptional regulator FlhC
ruditapes2_lrc3664	translation	protein metabolism	P	30S ribosomal protein S13
ruditapes_lrc34379	translation	protein metabolism	P	30S ribosomal protein S13
ruditapes_c36388	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c33634	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c33634	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c36388	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_c5913	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c33634	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_c5913	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_c5913	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c36388	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c25883	ion transport	transport	P	Na(+)/H(+) antiporter NhaB (Sodium/proton antiporter NhaB)
ruditapes_c25883	sodium ion transport	transport	P	Na(+)/H(+) antiporter NhaB (Sodium/proton antiporter NhaB)
ruditapes_c25883	transport	transport	P	Na(+)/H(+) antiporter NhaB (Sodium/proton antiporter NhaB)
ruditapes_c29346	nucleotide metabolic process	other metabolic processes	P	GMP reductase (EC 1.7.1.7) (Guanosine 5'-monophosphate oxidoreductase) (Guanosine monophosphate reductase)
ruditapes_c29346	oxidation reduction	other metabolic processes	P	GMP reductase (EC 1.7.1.7) (Guanosine 5'-monophosphate oxidoreductase) (Guanosine monophosphate reductase)
ruditapes_lrc13947	translation	protein metabolism	P	30S ribosomal protein S6
ruditapes_c22238	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c22238	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c7233	proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c7233	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c7233	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c7233	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c7233	ion transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c7233	transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c10263	riboflavin biosynthetic process	other metabolic processes	P	GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II)
ruditapes_lrc15132	transport	transport	P	Lissencephaly-1 homolog
ruditapes_lrc15132	mitosis	cell cycle and proliferation	P	Lissencephaly-1 homolog
ruditapes_lrc15132	mitosis	cell organization and biogenesis	P	Lissencephaly-1 homolog
ruditapes_lrc15132	cell cycle	cell cycle and proliferation	P	Lissencephaly-1 homolog
ruditapes_lrc15132	cell division	other biological processes	P	Lissencephaly-1 homolog
ruditapes_c27208	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 25 (U3 snoRNA-associated protein 25) (U three protein 25)
ruditapes_c27208	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 25 (U3 snoRNA-associated protein 25) (U three protein 25)
ruditapes_c7355	tRNA aminoacylation for protein translation	protein metabolism	P	"Probable asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c7355	tRNA aminoacylation for protein translation	RNA metabolism	P	"Probable asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c7355	translation	protein metabolism	P	"Probable asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c7355	asparaginyl-tRNA aminoacylation	protein metabolism	P	"Probable asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c7355	asparaginyl-tRNA aminoacylation	RNA metabolism	P	"Probable asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c2774	regulation of translation	protein metabolism	P	Probable eukaryotic translation initiation factor 4 gamma homolog (eIF-4-gamma)
ruditapes_c2774	translational initiation	protein metabolism	P	Probable eukaryotic translation initiation factor 4 gamma homolog (eIF-4-gamma)
ruditapes_c2774	translation	protein metabolism	P	Probable eukaryotic translation initiation factor 4 gamma homolog (eIF-4-gamma)
ruditapes_c2774	RNA metabolic process	RNA metabolism	P	Probable eukaryotic translation initiation factor 4 gamma homolog (eIF-4-gamma)
ruditapes_c30198	meiosis	cell cycle and proliferation	P	Probable meiosis-specific protein SPO11 homolog
ruditapes_c30198	sporulation resulting in formation of a cellular spore	other biological processes	P	Probable meiosis-specific protein SPO11 homolog
ruditapes_c30198	DNA metabolic process	DNA metabolism	P	Probable meiosis-specific protein SPO11 homolog
ruditapes_lrc28233	metabolic process	other metabolic processes	P	"Bifunctional enzyme IspD/IspF [Includes: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT); 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) (MECPP-synthase) (MECPS) (EC 4.6.1.12)]"
ruditapes_lrc28233	terpenoid biosynthetic process	other metabolic processes	P	"Bifunctional enzyme IspD/IspF [Includes: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT); 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) (MECPP-synthase) (MECPS) (EC 4.6.1.12)]"
ruditapes_lrc28233	isoprenoid biosynthetic process	other metabolic processes	P	"Bifunctional enzyme IspD/IspF [Includes: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT); 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) (MECPP-synthase) (MECPS) (EC 4.6.1.12)]"
ruditapes_lrc37727	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_lrc37727	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_c17953	ribosome biogenesis	other biological processes	P	Nucleolar protein 9 (Pumilio domain-containing protein NOP9)
ruditapes_c17953	rRNA processing	RNA metabolism	P	Nucleolar protein 9 (Pumilio domain-containing protein NOP9)
ruditapes2_c2739	proteolysis	protein metabolism	P	Candidapepsin-2 (EC 3.4.23.24) (ACP 2) (Aspartate protease 2) (Secreted aspartic protease 2)
ruditapes_c28274	cell division	other biological processes	P	Probable GTP-binding protein EngB
ruditapes_c28274	barrier septum formation	cell organization and biogenesis	P	Probable GTP-binding protein EngB
ruditapes_c28274	cell cycle	cell cycle and proliferation	P	Probable GTP-binding protein EngB
ruditapes_c8417	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c8417	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c8417	translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c8417	tRNA aminoacylation for protein translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c8417	tRNA aminoacylation for protein translation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c8417	tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c26873	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit L (EC 2.7.7.6)
ruditapes_c30902	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Cyclic pyranopterin monophosphate synthase (EC 4.1.99.18) (Molybdenum cofactor biosynthesis protein A)
ruditapes_c5990	DNA replication	DNA metabolism	P	Probable phosphatase NT01EI
ruditapes_lrc34758	protein transport	transport	P	Protein translocase subunit SecA
ruditapes_lrc34758	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes_lrc34758	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes_lrc34758	transport	transport	P	Protein translocase subunit SecA
ruditapes_lrc34758	protein import	transport	P	Protein translocase subunit SecA
ruditapes_c15977	lipid A biosynthetic process	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_c15977	phosphorylation	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_c15977	lipid biosynthetic process	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_c17990	pyridoxal phosphate biosynthetic process	other metabolic processes	P	D-erythrose-4-phosphate dehydrogenase (E4PDH) (EC 1.2.1.72)
ruditapes_c26776	oxidation reduction	other metabolic processes	P	D-erythrose-4-phosphate dehydrogenase (E4PDH) (EC 1.2.1.72)
ruditapes_c17990	oxidation reduction	other metabolic processes	P	D-erythrose-4-phosphate dehydrogenase (E4PDH) (EC 1.2.1.72)
ruditapes_c26776	pyridoxal phosphate biosynthetic process	other metabolic processes	P	D-erythrose-4-phosphate dehydrogenase (E4PDH) (EC 1.2.1.72)
ruditapes_c26776	pyridoxine biosynthetic process	other metabolic processes	P	D-erythrose-4-phosphate dehydrogenase (E4PDH) (EC 1.2.1.72)
ruditapes_c17990	pyridoxine biosynthetic process	other metabolic processes	P	D-erythrose-4-phosphate dehydrogenase (E4PDH) (EC 1.2.1.72)
ruditapes_c17899	transport	transport	P	C4-dicarboxylate transport protein
ruditapes_c17899	carbohydrate transport	transport	P	C4-dicarboxylate transport protein
ruditapes_c17899	dicarboxylic acid transport	transport	P	C4-dicarboxylate transport protein
ruditapes_c15837	ubiquinone biosynthetic process	other metabolic processes	P	"Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)"
ruditapes_c15837	menaquinone biosynthetic process	other metabolic processes	P	"Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)"
ruditapes_c15837	methylation	other metabolic processes	P	"Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)"
ruditapes_c18300	electron transport chain	other metabolic processes	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes_c18300	oxidation reduction	other metabolic processes	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes_c18300	nitrogen compound metabolic process	other metabolic processes	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes_c18300	transport	transport	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes_c12238	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c12238	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c12238	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c11987	phosphorylation	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_c11987	metabolic process	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_c4934	pyridoxine biosynthetic process	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c4934	oxidation reduction	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c4934	metabolic process	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c11370	translation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_c11370	translational initiation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_c11370	GTP catabolic process	other metabolic processes	P	Translation initiation factor IF-2
ruditapes_c18689	translation	protein metabolism	P	30S ribosomal protein S6
ruditapes_c22808	translation	protein metabolism	P	50S ribosomal protein L1
ruditapes_c22808	regulation of translation	protein metabolism	P	50S ribosomal protein L1
ruditapes_lrc19885	oxidation reduction	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_lrc19885	arginine biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_lrc19885	cellular amino acid biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_lrc19885	cellular amino acid metabolic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes2_c267	potassium ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes2_c267	transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes2_c267	ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c31573	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c31573	glycerol metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c31573	carbohydrate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c31573	phosphorylation	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c18370	aromatic amino acid family biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c18370	cellular amino acid biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_lrc25892	translation	protein metabolism	P	Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.-)
ruditapes_c13623	regulation of ARF GTPase activity	signal transduction	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c13623	DNA recombination	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c13623	response to DNA damage stimulus	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c13623	DNA repair	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c13623	DNA repair	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_lrc38652	RNA metabolic process	RNA metabolism	P	UPF0477 protein GWCH70
ruditapes_c19412	DNA repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c19412	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c19412	mismatch repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c19412	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c19412	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutL
ruditapes_c15243	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein hfq
ruditapes_c15243	response to stress	stress response	P	Protein hfq
ruditapes_c3932	chromatin modification	cell organization and biogenesis	P	ASTRA-associated protein 1
ruditapes_c14906	translation	protein metabolism	P	"Translation factor GUF1, mitochondrial (EC 3.6.5.-) (Elongation factor 4 homolog) (EF-4) (GTPase GUF1) (Ribosomal back-translocase)"
ruditapes_c14906	GTP catabolic process	other metabolic processes	P	"Translation factor GUF1, mitochondrial (EC 3.6.5.-) (Elongation factor 4 homolog) (EF-4) (GTPase GUF1) (Ribosomal back-translocase)"
ruditapes_lrc18342	cellular amino acid biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc18342	metabolic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc18342	phosphorylation	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc18342	oxidation reduction	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc18342	aromatic amino acid family biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c28184	pathogenesis	other biological processes	P	Tripeptidyl-peptidase SED1 (EC 3.4.14.-) (Sedolisin-A)
ruditapes_c28184	proteolysis	protein metabolism	P	Tripeptidyl-peptidase SED1 (EC 3.4.14.-) (Sedolisin-A)
ruditapes_c11147	metabolic process	other metabolic processes	P	"Probable endo-1,4-beta-xylanase C (Xylanase C) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase C)"
ruditapes_c11147	xylan catabolic process	other metabolic processes	P	"Probable endo-1,4-beta-xylanase C (Xylanase C) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase C)"
ruditapes_c11147	carbohydrate metabolic process	other metabolic processes	P	"Probable endo-1,4-beta-xylanase C (Xylanase C) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase C)"
ruditapes_c9707	metabolic process	other metabolic processes	P	Endochitinase 1 (EC 3.2.1.14) (CiX1) (Complement-fixation antigen) (CF-AG) (CF-antigen)
ruditapes_c9707	polysaccharide catabolic process	other metabolic processes	P	Endochitinase 1 (EC 3.2.1.14) (CiX1) (Complement-fixation antigen) (CF-AG) (CF-antigen)
ruditapes_c9707	chitin catabolic process	other metabolic processes	P	Endochitinase 1 (EC 3.2.1.14) (CiX1) (Complement-fixation antigen) (CF-AG) (CF-antigen)
ruditapes_c9707	carbohydrate metabolic process	other metabolic processes	P	Endochitinase 1 (EC 3.2.1.14) (CiX1) (Complement-fixation antigen) (CF-AG) (CF-antigen)
ruditapes2_c2687	metabolic process	other metabolic processes	P	Beta-sesquiphellandrene synthase (SbTPS2) (EC 4.2.3.123)
ruditapes_c14460	translation	protein metabolism	P	50S ribosomal protein L24e
ruditapes_c17725	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c17725	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c17725	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c14644	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c14644	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c14644	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c14644	tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c14644	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c14644	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_lrc34051	metabolic process	other metabolic processes	P	Probable butyrate kinase (BK) (EC 2.7.2.7) (Branched-chain carboxylic acid kinase)
ruditapes_lrc34051	phosphorylation	other metabolic processes	P	Probable butyrate kinase (BK) (EC 2.7.2.7) (Branched-chain carboxylic acid kinase)
ruditapes_c37219	nucleoside metabolic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c37219	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c12515	translation	protein metabolism	P	50S ribosomal protein L28
ruditapes2_c227	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c227	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c227	carbohydrate metabolic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c227	cell division	other biological processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c227	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c227	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c227	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c227	lipid glycosylation	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c27916	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase)
ruditapes_c27916	RNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase)
ruditapes_c27916	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase)
ruditapes_c6382	oxidation reduction	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c6382	cysteine biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c6382	cellular amino acid biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c29203	transport	transport	P	Cation/acetate symporter ActP (Acetate permease) (Acetate transporter ActP)
ruditapes_c29203	sodium ion transport	transport	P	Cation/acetate symporter ActP (Acetate permease) (Acetate transporter ActP)
ruditapes_c29203	transmembrane transport	transport	P	Cation/acetate symporter ActP (Acetate permease) (Acetate transporter ActP)
ruditapes_c29203	ion transport	transport	P	Cation/acetate symporter ActP (Acetate permease) (Acetate transporter ActP)
ruditapes_c9434	arginine biosynthetic process	other metabolic processes	P	Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS) (NAGS)
ruditapes_c9434	cellular amino acid biosynthetic process	other metabolic processes	P	Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS) (NAGS)
ruditapes_c24383	transmembrane transport	transport	P	Multidrug resistance protein MdtA (Multidrug transporter MdtA)
ruditapes_c24383	transport	transport	P	Multidrug resistance protein MdtA (Multidrug transporter MdtA)
ruditapes_c26236	protein import	transport	P	Protein translocase subunit SecA
ruditapes_c26236	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c26236	protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c26236	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes_c26236	transport	transport	P	Protein translocase subunit SecA
ruditapes_lrc8627	metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_lrc8627	aromatic amino acid family biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_lrc8627	tryptophan metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_lrc3933	aromatic amino acid family biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_lrc3933	tryptophan metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_lrc8627	cellular amino acid biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_lrc3933	metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_lrc8627	tryptophan biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_lrc3933	tryptophan biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_lrc3933	cellular amino acid biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_c1349	response to DNA damage stimulus	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes2_c1349	DNA recombination	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes2_c1349	DNA repair	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes2_c1349	DNA repair	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c27860	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c27860	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c27860	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c27860	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c27860	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c27860	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c22996	signal peptide processing	protein metabolism	P	Signal peptidase complex catalytic subunit SEC11 (EC 3.4.21.89) (Signal peptidase I)
ruditapes_c22996	proteolysis	protein metabolism	P	Signal peptidase complex catalytic subunit SEC11 (EC 3.4.21.89) (Signal peptidase I)
ruditapes_lrc27402	metabolic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc27402	phosphorylation	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc27402	cellular amino acid biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc27402	oxidation reduction	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc27402	aromatic amino acid family biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c13984	biosynthetic process	other metabolic processes	P	Chalcone synthase-like protein 1 (EC 2.3.1.-)
ruditapes_c13984	metabolic process	other metabolic processes	P	Chalcone synthase-like protein 1 (EC 2.3.1.-)
ruditapes_c17989	protein modification process	protein metabolism	P	Putative E3 ubiquitin-protein ligase protein PFF1365c (EC 6.3.2.-)
ruditapes_c17510	protein modification process	protein metabolism	P	Putative E3 ubiquitin-protein ligase protein PFF1365c (EC 6.3.2.-)
ruditapes_c11053	protein modification process	protein metabolism	P	Putative E3 ubiquitin-protein ligase protein PFF1365c (EC 6.3.2.-)
ruditapes_c15231	methylation	other metabolic processes	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes2_c2170	methylation	other metabolic processes	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes2_c2170	histone lysine methylation	protein metabolism	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes2_c2170	histone lysine methylation	cell organization and biogenesis	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes2_c2170	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes_c15231	"transcription, DNA-dependent"	RNA metabolism	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes_c15231	chromatin modification	cell organization and biogenesis	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes2_c2170	"transcription, DNA-dependent"	RNA metabolism	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes_c15231	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes_c15231	histone lysine methylation	protein metabolism	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes_c15231	histone lysine methylation	cell organization and biogenesis	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes2_c2170	chromatin modification	cell organization and biogenesis	P	Putative histone-lysine N-methyltransferase PFF1440w (EC 2.1.1.43)
ruditapes_c10447	multicellular organismal development	developmental processes	P	Protein argonaute
ruditapes_c10447	regulation of translation	protein metabolism	P	Protein argonaute
ruditapes_c10447	gene silencing by RNA	other metabolic processes	P	Protein argonaute
ruditapes_c10447	cell differentiation	other biological processes	P	Protein argonaute
ruditapes_c13981	oxidation reduction	other metabolic processes	P	Flagellar brake protein YcgR (Cyclic di-GMP binding protein YcgR)
ruditapes_lrc24564	defense response	stress response	P	(E)-beta-farnesene synthase (EC 4.2.3.47) (Terpene synthase 10)
ruditapes_lrc24564	metabolic process	other metabolic processes	P	(E)-beta-farnesene synthase (EC 4.2.3.47) (Terpene synthase 10)
ruditapes_c11154	metabolic process	other metabolic processes	P	Polyphenol oxidase 3 (PPO3) (Phenolase 3) (EC 1.14.18.1) (Cresolase) (Tyrosinase 3)
ruditapes_c11154	oxidation reduction	other metabolic processes	P	Polyphenol oxidase 3 (PPO3) (Phenolase 3) (EC 1.14.18.1) (Cresolase) (Tyrosinase 3)
ruditapes_lrc36362	chitin metabolic process	other metabolic processes	P	Protein PIF [Cleaved into: Protein Pif97; Protein Pif80 (Aragonite-binding protein)]
ruditapes_lrc32204	chitin metabolic process	other metabolic processes	P	Protein PIF [Cleaved into: Protein Pif97; Protein Pif80 (Aragonite-binding protein)]
ruditapes_c15357	chitin metabolic process	other metabolic processes	P	Protein PIF [Cleaved into: Protein Pif97; Protein Pif80 (Aragonite-binding protein)]
ruditapes2_c4182	chitin metabolic process	other metabolic processes	P	Protein PIF [Cleaved into: Protein Pif97; Protein Pif80 (Aragonite-binding protein)]
ruditapes2_c2276	chitin metabolic process	other metabolic processes	P	Protein PIF [Cleaved into: Protein Pif97; Protein Pif80 (Aragonite-binding protein)]
ruditapes_c1950	chitin metabolic process	other metabolic processes	P	Protein PIF [Cleaved into: Protein Pif97; Protein Pif80 (Aragonite-binding protein)]
ruditapes_c5716	chitin metabolic process	other metabolic processes	P	Protein PIF [Cleaved into: Protein Pif97; Protein Pif80 (Aragonite-binding protein)]
ruditapes_c18111	chromatin modification	cell organization and biogenesis	P	ASTRA-associated protein 1
ruditapes_c15369	protein catabolic process	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-)
ruditapes_c15369	proteolysis	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-)
ruditapes_lrc36524	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_lrc36524	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_lrc36524	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes_lrc36714	transport	transport	P	Vacuolar protein-sorting protein bro1 (BRO domain-containing protein 1)
ruditapes_lrc36714	protein transport	transport	P	Vacuolar protein-sorting protein bro1 (BRO domain-containing protein 1)
ruditapes_c24273	sporulation resulting in formation of a cellular spore	other biological processes	P	SCF E3 ubiquitin ligase complex F-box protein grrA (F-box and leucine-rich repeat protein grrA) (F-box/LRR-repeat protein grrA) (SCF substrate adapter protein grrA)
ruditapes_c24273	meiosis	cell cycle and proliferation	P	SCF E3 ubiquitin ligase complex F-box protein grrA (F-box and leucine-rich repeat protein grrA) (F-box/LRR-repeat protein grrA) (SCF substrate adapter protein grrA)
ruditapes_c8653	transport	transport	P	Conserved oligomeric Golgi complex subunit 6 (COG complex subunit 6) (Component of oligomeric Golgi complex 6)
ruditapes_c8653	protein transport	transport	P	Conserved oligomeric Golgi complex subunit 6 (COG complex subunit 6) (Component of oligomeric Golgi complex 6)
ruditapes_c8653	intra-Golgi vesicle-mediated transport	transport	P	Conserved oligomeric Golgi complex subunit 6 (COG complex subunit 6) (Component of oligomeric Golgi complex 6)
ruditapes_c20518	proteolysis	protein metabolism	P	Uncharacterized rhomboid protein AN10929
ruditapes_c24385	sensory perception of sound	other biological processes	P	Lipoxygenase homology domain-containing protein 1
ruditapes_c7780	DNA dealkylation	DNA metabolism	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c7780	DNA dealkylation	stress response	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c7780	DNA repair	DNA metabolism	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c7780	response to DNA damage stimulus	stress response	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c7780	methylation	other metabolic processes	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c7780	DNA repair	stress response	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c12350	cell redox homeostasis	other biological processes	P	Selenoprotein W (SelW)
ruditapes_c16756	transport	transport	P	p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B)
ruditapes_c24687	metabolic process	other metabolic processes	P	Alpha-glucosidase (EC 3.2.1.20) (Maltase)
ruditapes_c20167	carbohydrate metabolic process	other metabolic processes	P	Alpha-glucosidase (EC 3.2.1.20) (Maltase)
ruditapes_c20167	metabolic process	other metabolic processes	P	Alpha-glucosidase (EC 3.2.1.20) (Maltase)
ruditapes_c24687	carbohydrate metabolic process	other metabolic processes	P	Alpha-glucosidase (EC 3.2.1.20) (Maltase)
ruditapes_c10457	methylation	other metabolic processes	P	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC (EC 2.1.1.189) (23S rRNA(m5U747)-methyltransferase)
ruditapes_c10457	RNA processing	RNA metabolism	P	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC (EC 2.1.1.189) (23S rRNA(m5U747)-methyltransferase)
ruditapes_c10457	RNA metabolic process	RNA metabolism	P	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC (EC 2.1.1.189) (23S rRNA(m5U747)-methyltransferase)
ruditapes_c10457	rRNA processing	RNA metabolism	P	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC (EC 2.1.1.189) (23S rRNA(m5U747)-methyltransferase)
ruditapes_c10457	rRNA methylation	RNA metabolism	P	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC (EC 2.1.1.189) (23S rRNA(m5U747)-methyltransferase)
ruditapes_c28105	ATP catabolic process	other metabolic processes	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_c28105	proteasomal protein catabolic process	protein metabolism	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_c28105	modification-dependent protein catabolic process	protein metabolism	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_c18692	tRNA processing	RNA metabolism	P	tRNA (guanine(37)-N1)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase) (tRNA methyltransferase 5 homolog)
ruditapes_c18692	methylation	other metabolic processes	P	tRNA (guanine(37)-N1)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase) (tRNA methyltransferase 5 homolog)
ruditapes_c21348	proteolysis	protein metabolism	P	Proteasome subunit beta (EC 3.4.25.1) (20S proteasome beta subunit) (Proteasome core protein PsmB)
ruditapes_c21348	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta (EC 3.4.25.1) (20S proteasome beta subunit) (Proteasome core protein PsmB)
ruditapes_c11099	biosynthetic process	other metabolic processes	P	Bifunctional lycopene cyclase/phytoene synthase [Includes: Lycopene beta-cyclase (EC 5.5.1.19) (Lycopene cyclase); Phytoene synthase (EC 2.5.1.32)]
ruditapes_c11099	metabolic process	other metabolic processes	P	Bifunctional lycopene cyclase/phytoene synthase [Includes: Lycopene beta-cyclase (EC 5.5.1.19) (Lycopene cyclase); Phytoene synthase (EC 2.5.1.32)]
ruditapes_c11099	carotenoid biosynthetic process	other metabolic processes	P	Bifunctional lycopene cyclase/phytoene synthase [Includes: Lycopene beta-cyclase (EC 5.5.1.19) (Lycopene cyclase); Phytoene synthase (EC 2.5.1.32)]
ruditapes_c16929	protein ubiquitination	protein metabolism	P	Tripartite motif-containing protein 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM2)
ruditapes_c16929	neuroprotection	death	P	Tripartite motif-containing protein 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM2)
ruditapes_lrc8210	"transposition, DNA-mediated"	DNA metabolism	P	Vertnin
ruditapes_c29250	modification-dependent protein catabolic process	protein metabolism	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_c29250	ATP catabolic process	other metabolic processes	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_c29250	proteasomal protein catabolic process	protein metabolism	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_s38649	translation	protein metabolism	P	"Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)"
ruditapes_c21023	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta (EC 3.4.25.1) (20S proteasome beta subunit) (Proteasome core protein PsmB)
ruditapes_c21023	proteolysis	protein metabolism	P	Proteasome subunit beta (EC 3.4.25.1) (20S proteasome beta subunit) (Proteasome core protein PsmB)
ruditapes_c30140	protein catabolic process	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH 2 (EC 3.4.24.-)
ruditapes_c30140	proteolysis	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH 2 (EC 3.4.24.-)
ruditapes2_c3846	response to DNA damage stimulus	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc38728	DNA repair	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc38728	DNA repair	DNA metabolism	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc38751	response to DNA damage stimulus	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc38728	response to DNA damage stimulus	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc29070	cell cycle	cell cycle and proliferation	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc34491	DNA repair	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc34491	DNA repair	DNA metabolism	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc38728	cell cycle	cell cycle and proliferation	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc34120	cell cycle	cell cycle and proliferation	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc32594	DNA repair	DNA metabolism	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc32594	response to DNA damage stimulus	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc34120	response to DNA damage stimulus	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc38751	DNA repair	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc38751	DNA repair	DNA metabolism	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc32594	cell cycle	cell cycle and proliferation	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc32737	response to DNA damage stimulus	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc29070	response to DNA damage stimulus	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc34491	cell cycle	cell cycle and proliferation	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc32737	cell cycle	cell cycle and proliferation	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc32594	DNA repair	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc29070	DNA repair	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc29070	DNA repair	DNA metabolism	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc34120	DNA repair	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc34120	DNA repair	DNA metabolism	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes2_c3846	cell cycle	cell cycle and proliferation	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc38751	cell cycle	cell cycle and proliferation	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc32737	DNA repair	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc32737	DNA repair	DNA metabolism	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes2_c3846	DNA repair	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes2_c3846	DNA repair	DNA metabolism	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_lrc34491	response to DNA damage stimulus	stress response	P	"Treslin (TopBP1-interacting checkpoint and replication regulator) (TopBP1-interacting, replication-stimulating protein)"
ruditapes_c21783	biological_process	other biological processes	P	Probable E3 ubiquitin-protein ligase RNF217 (EC 6.3.2.-) (IBR domain-containing protein 1) (RING finger protein 217)
ruditapes_c10938	protein modification process	protein metabolism	P	E3 ubiquitin-protein ligase HACE1 (EC 6.3.2.-) (HECT domain and ankyrin repeat-containing E3 ubiquitin-protein ligase 1)
ruditapes_c31561	protein ubiquitination	protein metabolism	P	Ubiquitin-conjugating enzyme E2 D1 (EC 6.3.2.19) (Ubiquitin carrier protein D1) (Ubiquitin-conjugating enzyme E2(17)KB 1) (Ubiquitin-conjugating enzyme E2-17 kDa 1) (Ubiquitin-protein ligase D1)
ruditapes_c31561	protein polyubiquitination	protein metabolism	P	Ubiquitin-conjugating enzyme E2 D1 (EC 6.3.2.19) (Ubiquitin carrier protein D1) (Ubiquitin-conjugating enzyme E2(17)KB 1) (Ubiquitin-conjugating enzyme E2-17 kDa 1) (Ubiquitin-protein ligase D1)
ruditapes_c31561	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2 D1 (EC 6.3.2.19) (Ubiquitin carrier protein D1) (Ubiquitin-conjugating enzyme E2(17)KB 1) (Ubiquitin-conjugating enzyme E2-17 kDa 1) (Ubiquitin-protein ligase D1)
ruditapes_c31561	positive regulation of protein ubiquitination	protein metabolism	P	Ubiquitin-conjugating enzyme E2 D1 (EC 6.3.2.19) (Ubiquitin carrier protein D1) (Ubiquitin-conjugating enzyme E2(17)KB 1) (Ubiquitin-conjugating enzyme E2-17 kDa 1) (Ubiquitin-protein ligase D1)
ruditapes_c22212	Golgi to plasma membrane protein transport	transport	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c22212	positive regulation of Wnt receptor signaling pathway	signal transduction	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c22212	regulation of focal adhesion formation	cell adhesion	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c22212	regulation of focal adhesion formation	cell organization and biogenesis	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c22212	wound healing	stress response	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c22212	ATP catabolic process	other metabolic processes	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c22212	regulation of epithelial cell migration	other biological processes	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c22212	regulation of microtubule-based process	other biological processes	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c22212	cell cycle arrest	cell cycle and proliferation	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c22212	Wnt receptor signaling pathway	signal transduction	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c14103	positive regulation of cell-cell adhesion	cell adhesion	P	Unconventional myosin-X (Unconventional myosin-10)
ruditapes_c21898	signal transduction	signal transduction	P	Plexin-B3 (Protein Plxnb3)
ruditapes_c21898	multicellular organismal development	developmental processes	P	Plexin-B3 (Protein Plxnb3)
ruditapes_c9580	peptidyl-serine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	neuron differentiation	developmental processes	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	nervous system development	developmental processes	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	response to UV	other biological processes	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	response to ionizing radiation	other biological processes	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	axonogenesis	developmental processes	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	axonogenesis	cell organization and biogenesis	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	establishment of cell polarity	cell organization and biogenesis	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	G2/M transition DNA damage checkpoint	cell cycle and proliferation	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	G2/M transition DNA damage checkpoint	signal transduction	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	G2/M transition DNA damage checkpoint	stress response	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	neuron projection morphogenesis	developmental processes	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c9580	neuron projection morphogenesis	cell organization and biogenesis	P	Serine/threonine-protein kinase BRSK2 (EC 2.7.11.1) (EC 2.7.11.26) (Brain-specific serine/threonine-protein kinase 2) (BR serine/threonine-protein kinase 2) (Serine/threonine-protein kinase SAD-A)
ruditapes_c27986	pyramidal neuron development	developmental processes	P	Plexin-A3
ruditapes_c27986	signal transduction	signal transduction	P	Plexin-A3
ruditapes_c27986	axon guidance	developmental processes	P	Plexin-A3
ruditapes_c27986	axon guidance	cell organization and biogenesis	P	Plexin-A3
ruditapes_c27986	negative regulation of axon extension involved in axon guidance	developmental processes	P	Plexin-A3
ruditapes_c27986	negative regulation of axon extension involved in axon guidance	cell organization and biogenesis	P	Plexin-A3
ruditapes_c27986	hippocampus development	developmental processes	P	Plexin-A3
ruditapes_c27986	multicellular organismal development	developmental processes	P	Plexin-A3
ruditapes_c27986	positive regulation of cytoskeleton organization	cell organization and biogenesis	P	Plexin-A3
ruditapes_c27986	negative chemotaxis	other biological processes	P	Plexin-A3
ruditapes_c9505	protein ubiquitination	protein metabolism	P	Tripartite motif-containing protein 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM2)
ruditapes_c16410	neuroprotection	death	P	Tripartite motif-containing protein 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM2)
ruditapes_c9505	neuroprotection	death	P	Tripartite motif-containing protein 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM2)
ruditapes_c16410	protein ubiquitination	protein metabolism	P	Tripartite motif-containing protein 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM2)
ruditapes_c23047	oxidation reduction	other metabolic processes	P	Protein-methionine sulfoxide oxidase MICAL2 (EC 1.14.13.-) (Molecule interacting with CasL protein 2) (MICAL-2)
ruditapes_c23047	metabolic process	other metabolic processes	P	Protein-methionine sulfoxide oxidase MICAL2 (EC 1.14.13.-) (Molecule interacting with CasL protein 2) (MICAL-2)
ruditapes_c9388	anti-apoptosis	death	P	Serine/threonine-protein kinase PAK 7 (EC 2.7.11.1) (p21-activated kinase 5) (PAK-5) (p21-activated kinase 7) (PAK-7)
ruditapes_c9388	apoptosis	death	P	Serine/threonine-protein kinase PAK 7 (EC 2.7.11.1) (p21-activated kinase 5) (PAK-5) (p21-activated kinase 7) (PAK-7)
ruditapes_c9388	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PAK 7 (EC 2.7.11.1) (p21-activated kinase 5) (PAK-5) (p21-activated kinase 7) (PAK-7)
ruditapes_c9388	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PAK 7 (EC 2.7.11.1) (p21-activated kinase 5) (PAK-5) (p21-activated kinase 7) (PAK-7)
ruditapes_c858	negative regulation of peptidase activity	other biological processes	P	Eppin (Epididymal protease inhibitor) (Serine protease inhibitor-like with Kunitz and WAP domains 1)
ruditapes_c9241	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 158
ruditapes_c9241	signal transduction	signal transduction	P	Probable G-protein coupled receptor 158
ruditapes_c27796	biological_process	other biological processes	P	G-protein coupled receptor 183 (Epstein-Barr virus-induced G-protein coupled receptor 2) (EBI2) (EBV-induced G-protein coupled receptor 2)
ruditapes_c27796	signal transduction	signal transduction	P	G-protein coupled receptor 183 (Epstein-Barr virus-induced G-protein coupled receptor 2) (EBI2) (EBV-induced G-protein coupled receptor 2)
ruditapes_c27796	humoral immune response	other biological processes	P	G-protein coupled receptor 183 (Epstein-Barr virus-induced G-protein coupled receptor 2) (EBI2) (EBV-induced G-protein coupled receptor 2)
ruditapes_c27796	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 183 (Epstein-Barr virus-induced G-protein coupled receptor 2) (EBI2) (EBV-induced G-protein coupled receptor 2)
ruditapes_c27796	mature B cell differentiation during immune response	developmental processes	P	G-protein coupled receptor 183 (Epstein-Barr virus-induced G-protein coupled receptor 2) (EBI2) (EBV-induced G-protein coupled receptor 2)
ruditapes_c22885	pathogenesis	other biological processes	P	Probable aspartic-type endopeptidase CTSD (EC 3.4.23.-)
ruditapes_c22885	proteolysis	protein metabolism	P	Probable aspartic-type endopeptidase CTSD (EC 3.4.23.-)
ruditapes_c8430	proteolysis	protein metabolism	P	Methionine aminopeptidase 2 homolog ARB
ruditapes_c8430	cellular process	other biological processes	P	Methionine aminopeptidase 2 homolog ARB
ruditapes_c9818	metabolic process	other metabolic processes	P	Probable carboxypeptidase TRV
ruditapes_c9818	proteolysis	protein metabolism	P	Probable carboxypeptidase TRV
ruditapes_c1827	pathogenesis	other biological processes	P	Probable tripeptidyl-peptidase SED3 (EC 3.4.14.-) (Sedolisin-C)
ruditapes_c1827	proteolysis	protein metabolism	P	Probable tripeptidyl-peptidase SED3 (EC 3.4.14.-) (Sedolisin-C)
ruditapes_c31692	mitosis	cell cycle and proliferation	P	Nuclear distribution protein PAC1 (Lissencephaly-1 homolog) (LIS-1) (nudF homolog)
ruditapes_c31692	mitosis	cell organization and biogenesis	P	Nuclear distribution protein PAC1 (Lissencephaly-1 homolog) (LIS-1) (nudF homolog)
ruditapes_c31692	transport	transport	P	Nuclear distribution protein PAC1 (Lissencephaly-1 homolog) (LIS-1) (nudF homolog)
ruditapes_c31692	cell division	other biological processes	P	Nuclear distribution protein PAC1 (Lissencephaly-1 homolog) (LIS-1) (nudF homolog)
ruditapes_c31692	cell cycle	cell cycle and proliferation	P	Nuclear distribution protein PAC1 (Lissencephaly-1 homolog) (LIS-1) (nudF homolog)
ruditapes_c9956	proteolysis	protein metabolism	P	Carboxypeptidase Y homolog A (EC 3.4.16.5)
ruditapes_c2360	"transcription, DNA-dependent"	RNA metabolism	P	Flagellar transcriptional regulator FlhD
ruditapes_c2360	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Flagellar transcriptional regulator FlhD
ruditapes_c2360	flagellum organization	cell organization and biogenesis	P	Flagellar transcriptional regulator FlhD
ruditapes_c2360	flagellum assembly	cell organization and biogenesis	P	Flagellar transcriptional regulator FlhD
ruditapes_c2360	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Flagellar transcriptional regulator FlhD
ruditapes_c17648	transition metal ion transport	transport	P	Fused nickel transport protein NikMN (Energy-coupling factor transporter probable substrate-capture protein NikMN) (ECF transporter S component NikMN)
ruditapes_c17648	nickel ion transport	transport	P	Fused nickel transport protein NikMN (Energy-coupling factor transporter probable substrate-capture protein NikMN) (ECF transporter S component NikMN)
ruditapes_c17648	ion transport	transport	P	Fused nickel transport protein NikMN (Energy-coupling factor transporter probable substrate-capture protein NikMN) (ECF transporter S component NikMN)
ruditapes_c17648	transport	transport	P	Fused nickel transport protein NikMN (Energy-coupling factor transporter probable substrate-capture protein NikMN) (ECF transporter S component NikMN)
ruditapes_c27650	metabolic process	other metabolic processes	P	Acetylxylan esterase (EC 3.1.1.72)
ruditapes_lrc27421	xylan catabolic process	other metabolic processes	P	"Beta-1,3-xylanase XYL4 (EC 3.2.1.32) (Beta-1,3-xylanase)"
ruditapes_lrc27421	carbohydrate metabolic process	other metabolic processes	P	"Beta-1,3-xylanase XYL4 (EC 3.2.1.32) (Beta-1,3-xylanase)"
ruditapes_lrc27421	polysaccharide catabolic process	other metabolic processes	P	"Beta-1,3-xylanase XYL4 (EC 3.2.1.32) (Beta-1,3-xylanase)"
ruditapes_lrc27421	metabolic process	other metabolic processes	P	"Beta-1,3-xylanase XYL4 (EC 3.2.1.32) (Beta-1,3-xylanase)"
ruditapes_lrc27421	cellulose catabolic process	other metabolic processes	P	"Beta-1,3-xylanase XYL4 (EC 3.2.1.32) (Beta-1,3-xylanase)"
ruditapes_lrc13513	cell division	other biological processes	P	Cell division protein DivIB
ruditapes_lrc13513	cell cycle	cell cycle and proliferation	P	Cell division protein DivIB
ruditapes_c16297	mycothiol biosynthetic process	other metabolic processes	P	L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase (L-Cys:GlcN-Ins ligase) (EC 6.3.1.13) (Mycothiol ligase) (MSH ligase)
ruditapes_c15266	methylation	other metabolic processes	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c15266	histone methylation	protein metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c15266	histone methylation	cell organization and biogenesis	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c15266	developmental cell growth	other biological processes	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c15266	histone arginine methylation	protein metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c15266	histone arginine methylation	cell organization and biogenesis	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c15266	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c15266	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c15266	induction of apoptosis	death	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c15266	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c15045	nucleotide metabolic process	other metabolic processes	P	Non-canonical purine NTP pyrophosphatase (EC 3.6.1.19) (Non-standard purine NTP pyrophosphatase) (Nucleoside-triphosphate diphosphatase) (Nucleoside-triphosphate pyrophosphatase) (NTPase)
ruditapes_c21285	lysine biosynthetic process	other metabolic processes	P	Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (EC 4.1.1.20)
ruditapes_c21285	cellular amino acid biosynthetic process	other metabolic processes	P	Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (EC 4.1.1.20)
ruditapes_c21285	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (EC 4.1.1.20)
ruditapes_c28756	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase Pus10 (EC 5.4.99.-) (tRNA pseudouridine 54/55 synthase) (Psi54/55 synthase)
ruditapes_c28756	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase Pus10 (EC 5.4.99.-) (tRNA pseudouridine 54/55 synthase) (Psi54/55 synthase)
ruditapes_c28756	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase Pus10 (EC 5.4.99.-) (tRNA pseudouridine 54/55 synthase) (Psi54/55 synthase)
ruditapes_c28756	tRNA modification	RNA metabolism	P	tRNA pseudouridine synthase Pus10 (EC 5.4.99.-) (tRNA pseudouridine 54/55 synthase) (Psi54/55 synthase)
ruditapes2_c855	response to type I interferon	stress response	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes2_c855	protein K63-linked ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes2_c855	interferon-beta production	other biological processes	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes2_c855	response to virus	other biological processes	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes2_c855	defense response to virus	stress response	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes2_c855	innate immune response	stress response	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes2_c6227	glucocorticoid metabolic process	other metabolic processes	P	Corticosteroid-binding globulin (CBG) (Serpin A6) (Transcortin)
ruditapes_c20568	response to DNA damage stimulus	stress response	P	Mitochondria-eating protein (Spermatogenesis-associated protein 18)
ruditapes_c20568	cellular response to stress	stress response	P	Mitochondria-eating protein (Spermatogenesis-associated protein 18)
ruditapes_c18537	mitosis	cell cycle and proliferation	P	Serine/threonine-protein kinase greatwall (GW) (GWL) (EC 2.7.11.1) (Microtubule-associated serine/threonine-protein kinase-like) (MAST-L)
ruditapes_c18537	mitosis	cell organization and biogenesis	P	Serine/threonine-protein kinase greatwall (GW) (GWL) (EC 2.7.11.1) (Microtubule-associated serine/threonine-protein kinase-like) (MAST-L)
ruditapes_c18537	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase greatwall (GW) (GWL) (EC 2.7.11.1) (Microtubule-associated serine/threonine-protein kinase-like) (MAST-L)
ruditapes_c18537	negative regulation of protein phosphatase type 2A activity	other metabolic processes	P	Serine/threonine-protein kinase greatwall (GW) (GWL) (EC 2.7.11.1) (Microtubule-associated serine/threonine-protein kinase-like) (MAST-L)
ruditapes_c18537	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase greatwall (GW) (GWL) (EC 2.7.11.1) (Microtubule-associated serine/threonine-protein kinase-like) (MAST-L)
ruditapes_c18537	cell division	other biological processes	P	Serine/threonine-protein kinase greatwall (GW) (GWL) (EC 2.7.11.1) (Microtubule-associated serine/threonine-protein kinase-like) (MAST-L)
ruditapes_c18537	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase greatwall (GW) (GWL) (EC 2.7.11.1) (Microtubule-associated serine/threonine-protein kinase-like) (MAST-L)
ruditapes_c18537	G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase greatwall (GW) (GWL) (EC 2.7.11.1) (Microtubule-associated serine/threonine-protein kinase-like) (MAST-L)
ruditapes_c18537	regulation of cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase greatwall (GW) (GWL) (EC 2.7.11.1) (Microtubule-associated serine/threonine-protein kinase-like) (MAST-L)
ruditapes_c18537	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase greatwall (GW) (GWL) (EC 2.7.11.1) (Microtubule-associated serine/threonine-protein kinase-like) (MAST-L)
ruditapes_s35967	cellular amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_s35967	leucine biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_s35967	branched chain family amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_s35967	carboxylic acid metabolic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c10796	metabolic process	other metabolic processes	P	Taraxerol synthase (KdTAS) (EC 5.4.99.35)
ruditapes_lrc35408	synaptonemal complex assembly	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_lrc35408	synaptonemal complex assembly	cell organization and biogenesis	P	HORMA domain-containing protein 1
ruditapes_lrc35408	spermatogenesis	other biological processes	P	HORMA domain-containing protein 1
ruditapes_lrc35408	meiosis	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_lrc35408	oogenesis	other biological processes	P	HORMA domain-containing protein 1
ruditapes_lrc35408	meiotic DNA double-strand break formation	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_lrc35408	regulation of homologous chromosome segregation	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_lrc35408	meiotic DNA double-strand break formation	DNA metabolism	P	HORMA domain-containing protein 1
ruditapes_lrc35408	meiotic recombination checkpoint	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_lrc35408	cell differentiation	other biological processes	P	HORMA domain-containing protein 1
ruditapes_lrc35408	meiotic sister chromatid cohesion	cell cycle and proliferation	P	HORMA domain-containing protein 1
ruditapes_lrc35408	meiotic sister chromatid cohesion	cell organization and biogenesis	P	HORMA domain-containing protein 1
ruditapes_lrc35408	blastocyst development	developmental processes	P	HORMA domain-containing protein 1
ruditapes_lrc37864	cell division	other biological processes	P	Cell division protein FtsQ
ruditapes_lrc37864	cell cycle	cell cycle and proliferation	P	Cell division protein FtsQ
ruditapes_c19021	proteolysis	protein metabolism	P	Probable zinc metalloprotease GLRG
ruditapes_c31177	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 25 (U3 snoRNA-associated protein 25) (U three protein 25)
ruditapes_c31177	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 25 (U3 snoRNA-associated protein 25) (U three protein 25)
ruditapes_c26049	cellular process	other biological processes	P	Probable Xaa-Pro aminopeptidase PEPP (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Prolidase)
ruditapes_c26049	proteolysis	protein metabolism	P	Probable Xaa-Pro aminopeptidase PEPP (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Prolidase)
ruditapes_s38620	biological_process	other biological processes	P	Testis- and ovary-specific PAZ domain-containing protein 1
ruditapes_lrc33149	proteolysis	protein metabolism	P	Probable zinc metalloprotease Lema
ruditapes_c27408	carbohydrate metabolic process	other metabolic processes	P	Maltose phosphorylase (EC 2.4.1.8)
ruditapes_c6671	apoptosis	death	P	Pheromone-processing carboxypeptidase KEX1 (EC 3.4.16.6) (Carboxypeptidase D)
ruditapes_c6671	proteolysis	protein metabolism	P	Pheromone-processing carboxypeptidase KEX1 (EC 3.4.16.6) (Carboxypeptidase D)
ruditapes_c10146	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.4.19.12) (Deubiquitinating enzyme 37) (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37)
ruditapes_c10146	cell division	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.4.19.12) (Deubiquitinating enzyme 37) (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37)
ruditapes_c10146	cell cycle	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.4.19.12) (Deubiquitinating enzyme 37) (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37)
ruditapes_c10146	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.4.19.12) (Deubiquitinating enzyme 37) (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37)
ruditapes_c10146	central nervous system morphogenesis	developmental processes	P	Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.4.19.12) (Deubiquitinating enzyme 37) (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37)
ruditapes_c10146	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.4.19.12) (Deubiquitinating enzyme 37) (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37)
ruditapes_c10146	mitosis	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.4.19.12) (Deubiquitinating enzyme 37) (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37)
ruditapes_c10146	mitosis	cell organization and biogenesis	P	Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.4.19.12) (Deubiquitinating enzyme 37) (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37)
ruditapes_c25736	methionine biosynthetic process	other metabolic processes	P	"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) (Acireductone dioxygenase (Fe(2+)-requiring)) (ARD) (Fe-ARD)"
ruditapes_c25736	cellular amino acid biosynthetic process	other metabolic processes	P	"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) (Acireductone dioxygenase (Fe(2+)-requiring)) (ARD) (Fe-ARD)"
ruditapes_c25736	oxidation reduction	other metabolic processes	P	"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) (Acireductone dioxygenase (Fe(2+)-requiring)) (ARD) (Fe-ARD)"
ruditapes_c31438	L-phenylalanine catabolic process	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) (EC 1.13.11.27) (T-cell reactive protein)
ruditapes_c31438	oxidation reduction	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) (EC 1.13.11.27) (T-cell reactive protein)
ruditapes_c31438	aromatic amino acid family metabolic process	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) (EC 1.13.11.27) (T-cell reactive protein)
ruditapes_c31438	tyrosine catabolic process	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) (EC 1.13.11.27) (T-cell reactive protein)
ruditapes_c25739	proteolysis	protein metabolism	P	Probable zinc metalloprotease CPSG
ruditapes_c31604	proteolysis	protein metabolism	P	Probable zinc metalloprotease CPSG
ruditapes_c23508	proteolysis	protein metabolism	P	Probable Xaa-Pro aminopeptidase pepP (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Prolidase)
ruditapes_c23508	cellular process	other biological processes	P	Probable Xaa-Pro aminopeptidase pepP (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Prolidase)
ruditapes_c15070	proteolysis	protein metabolism	P	Probable zinc metalloprotease MAA
ruditapes_c25123	biological_process	other biological processes	P	BTB/POZ domain-containing protein 16
ruditapes_c6972	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes2_c2522	monocyte chemotaxis	other biological processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c6972	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c6972	axon guidance	developmental processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c6972	axon guidance	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c6972	glomerulus development	developmental processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes2_c2522	negative regulation of glomerular filtration	other biological processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c6972	monocyte chemotaxis	other biological processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes2_c2522	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c6972	regulation of glomerular filtration	other biological processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c6972	cell morphogenesis	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes2_c2522	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes2_c2522	axon guidance	developmental processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes2_c2522	axon guidance	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes2_c2522	glomerulus development	developmental processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes2_c2522	regulation of glomerular filtration	other biological processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c6972	lamellipodium assembly	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes2_c2522	cell morphogenesis	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes2_c2522	lamellipodium assembly	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c6972	negative regulation of glomerular filtration	other biological processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c10741	metabolic process	other metabolic processes	P	Polyketide synthase 5 (EC 2.3.1.-)
ruditapes_c10741	biosynthetic process	other metabolic processes	P	Polyketide synthase 5 (EC 2.3.1.-)
ruditapes_c17318	muscle contraction	other biological processes	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	ion transport	transport	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	ossification involved in bone morphogenesis	developmental processes	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	cellular calcium ion homeostasis	other biological processes	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	transmembrane calcium ion transport	transport	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	release of sequestered calcium ion into cytosol by sarcoplasmic reticulum	transport	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	transmembrane transport	transport	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	response to hypoxia	stress response	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	calcium ion transport	transport	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	transport	transport	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	skin development	developmental processes	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	skeletal muscle fiber development	developmental processes	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c17318	release of sequestered calcium ion into cytosol	transport	P	Ryanodine receptor 1 (RYR-1) (RyR1) (Skeletal muscle calcium release channel) (Skeletal muscle ryanodine receptor) (Skeletal muscle-type ryanodine receptor) (Type 1 ryanodine receptor)
ruditapes_c23316	protein modification process	protein metabolism	P	E3 ubiquitin-protein ligase TRIP12 (EC 6.3.2.-) (Thyroid receptor-interacting protein 12) (TR-interacting protein 12) (TRIP-12)
ruditapes_c12767	protein amino acid phosphorylation	protein metabolism	P	Inactive serine/threonine-protein kinase TEX14 (Testis-expressed sequence 14) (Testis-expressed sequence 14 protein)
ruditapes_c28422	choline metabolic process	other metabolic processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 (E-NPP 6) (NPP-6) (EC 3.1.4.-) (EC 3.1.4.38) (Choline-specific glycerophosphodiester phosphodiesterase) (Glycerophosphocholine choline phosphodiesterase) (GPC-Cpde)
ruditapes_c28422	metabolic process	other metabolic processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 (E-NPP 6) (NPP-6) (EC 3.1.4.-) (EC 3.1.4.38) (Choline-specific glycerophosphodiester phosphodiesterase) (Glycerophosphocholine choline phosphodiesterase) (GPC-Cpde)
ruditapes_c23266	potassium ion transport	transport	P	"ATP-sensitive inward rectifier potassium channel 12 (Inward rectifier K(+) channel Kir2.2) (Potassium channel, inwardly rectifying subfamily J member 12)"
ruditapes_c23266	ion transport	transport	P	"ATP-sensitive inward rectifier potassium channel 12 (Inward rectifier K(+) channel Kir2.2) (Potassium channel, inwardly rectifying subfamily J member 12)"
ruditapes_c23266	regulation of transmembrane ion transport	transport	P	"ATP-sensitive inward rectifier potassium channel 12 (Inward rectifier K(+) channel Kir2.2) (Potassium channel, inwardly rectifying subfamily J member 12)"
ruditapes_c23266	transport	transport	P	"ATP-sensitive inward rectifier potassium channel 12 (Inward rectifier K(+) channel Kir2.2) (Potassium channel, inwardly rectifying subfamily J member 12)"
ruditapes_c20008	oxidation reduction	other metabolic processes	P	Lysyl oxidase homolog 2A (EC 1.4.3.13) (Lysyl oxidase-like protein 2A)
ruditapes_c9288	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ISG15--protein ligase Herc6 (EC 6.3.2.-)
ruditapes_c9288	protein modification process	protein metabolism	P	E3 ISG15--protein ligase Herc6 (EC 6.3.2.-)
ruditapes_c17732	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase epsilon catalytic subunit B (EC 2.7.7.7) (DNA polymerase 2 b) (AtPOL2b) (DNA polymerase II subunit b) (Protein TILTED 2)
ruditapes_c17732	DNA replication	DNA metabolism	P	DNA polymerase epsilon catalytic subunit B (EC 2.7.7.7) (DNA polymerase 2 b) (AtPOL2b) (DNA polymerase II subunit b) (Protein TILTED 2)
ruditapes_c22747	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 6
ruditapes_c18886	metabolic process	other metabolic processes	P	Short-chain dehydrogenase reductase 5 (AtSDR5) (EC 1.1.1.-)
ruditapes_c18886	oxidation reduction	other metabolic processes	P	Short-chain dehydrogenase reductase 5 (AtSDR5) (EC 1.1.1.-)
ruditapes2_c1296	biosynthetic process	other metabolic processes	P	Probable sucrose-phosphate synthase 4 (EC 2.4.1.14) (Sucrose phosphate synthase 4F) (AtSPS4F) (UDP-glucose-fructose-phosphate glucosyltransferase)
ruditapes2_c1296	sucrose metabolic process	other metabolic processes	P	Probable sucrose-phosphate synthase 4 (EC 2.4.1.14) (Sucrose phosphate synthase 4F) (AtSPS4F) (UDP-glucose-fructose-phosphate glucosyltransferase)
ruditapes_lrc33810	transport	transport	P	CMP-sialic acid transporter 4 (CMP-SA-Tr 4) (CMP-Sia-Tr 4)
ruditapes_lrc33810	nucleotide-sugar transport	transport	P	CMP-sialic acid transporter 4 (CMP-SA-Tr 4) (CMP-Sia-Tr 4)
ruditapes2_lrc4003	carbohydrate transport	transport	P	CMP-sialic acid transporter 4 (CMP-SA-Tr 4) (CMP-Sia-Tr 4)
ruditapes2_lrc4003	transport	transport	P	CMP-sialic acid transporter 4 (CMP-SA-Tr 4) (CMP-Sia-Tr 4)
ruditapes2_lrc4003	nucleotide-sugar transport	transport	P	CMP-sialic acid transporter 4 (CMP-SA-Tr 4) (CMP-Sia-Tr 4)
ruditapes_lrc33810	carbohydrate transport	transport	P	CMP-sialic acid transporter 4 (CMP-SA-Tr 4) (CMP-Sia-Tr 4)
ruditapes_c1018	metabolic process	other metabolic processes	P	Putative acyl-activating enzyme 19
ruditapes_c24866	viral genome replication	other biological processes	P	DNA helicase/primase complex-associated protein
ruditapes_lrc35761	carbohydrate metabolic process	other metabolic processes	P	"Galactan endo-beta-1,3-galactanase (EC 3.2.1.181) (Endo-beta-1,3-galactanase) (FvEN3GAL)"
ruditapes_lrc34050	carbohydrate metabolic process	other metabolic processes	P	"Galactan endo-beta-1,3-galactanase (EC 3.2.1.181) (Endo-beta-1,3-galactanase) (FvEN3GAL)"
ruditapes_lrc32468	carbohydrate metabolic process	other metabolic processes	P	"Galactan endo-beta-1,3-galactanase (EC 3.2.1.181) (Endo-beta-1,3-galactanase) (FvEN3GAL)"
ruditapes_lrc34587	carbohydrate metabolic process	other metabolic processes	P	"Galactan endo-beta-1,3-galactanase (EC 3.2.1.181) (Endo-beta-1,3-galactanase) (FvEN3GAL)"
ruditapes_lrc35026	carbohydrate metabolic process	other metabolic processes	P	"Galactan endo-beta-1,3-galactanase (EC 3.2.1.181) (Endo-beta-1,3-galactanase) (FvEN3GAL)"
ruditapes_s37634	cell division	other biological processes	P	Cell division protein DivIB
ruditapes_s37634	cell cycle	cell cycle and proliferation	P	Cell division protein DivIB
ruditapes_c29186	translation	protein metabolism	P	"Putative mitochondrial ribosomal protein new15, mitochondrial"
ruditapes2_c446	oxidation reduction	other metabolic processes	P	Protein-methionine sulfoxide oxidase MICAL3 (EC 1.14.13.-) (Molecule interacting with CasL protein 3) (MICAL-3)
ruditapes2_c446	metabolic process	other metabolic processes	P	Protein-methionine sulfoxide oxidase MICAL3 (EC 1.14.13.-) (Molecule interacting with CasL protein 3) (MICAL-3)
ruditapes_lrc8720	proteolysis	protein metabolism	P	Androglobin (Calpain-7-like protein)
ruditapes_lrc8720	oxygen transport	transport	P	Androglobin (Calpain-7-like protein)
ruditapes_lrc8720	biological_process	other biological processes	P	Androglobin (Calpain-7-like protein)
ruditapes_s37478	oxidation reduction	other metabolic processes	P	UDP-N-acetyl-D-glucosamine 6-dehydrogenase (UDP-D-GlcNAc 6-dehydrogenase) (EC 1.1.1.136) (UDP-N-acetylglucosamine 6-dehydrogenase)
ruditapes2_c2329	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase TRIP12 (EC 6.3.2.-) (Thyroid receptor-interacting protein 12) (TR-interacting protein 12) (TRIP-12)
ruditapes2_c2329	protein modification process	protein metabolism	P	E3 ubiquitin-protein ligase TRIP12 (EC 6.3.2.-) (Thyroid receptor-interacting protein 12) (TR-interacting protein 12) (TRIP-12)
ruditapes2_c972	complement activation	stress response	P	Mannan-binding lectin serine protease 2 (EC 3.4.21.104) (MBL-associated serine protease 2) (Mannose-binding protein-associated serine protease 2) (MASP-2) [Cleaved into: Mannan-binding lectin serine protease 2 A chain; Mannan-binding lectin serine protease 2 B chain]
ruditapes2_c972	complement activation	protein metabolism	P	Mannan-binding lectin serine protease 2 (EC 3.4.21.104) (MBL-associated serine protease 2) (Mannose-binding protein-associated serine protease 2) (MASP-2) [Cleaved into: Mannan-binding lectin serine protease 2 A chain; Mannan-binding lectin serine protease 2 B chain]
ruditapes2_c972	proteolysis	protein metabolism	P	Mannan-binding lectin serine protease 2 (EC 3.4.21.104) (MBL-associated serine protease 2) (Mannose-binding protein-associated serine protease 2) (MASP-2) [Cleaved into: Mannan-binding lectin serine protease 2 A chain; Mannan-binding lectin serine protease 2 B chain]
ruditapes2_c972	"complement activation, lectin pathway"	stress response	P	Mannan-binding lectin serine protease 2 (EC 3.4.21.104) (MBL-associated serine protease 2) (Mannose-binding protein-associated serine protease 2) (MASP-2) [Cleaved into: Mannan-binding lectin serine protease 2 A chain; Mannan-binding lectin serine protease 2 B chain]
ruditapes2_c972	"complement activation, lectin pathway"	protein metabolism	P	Mannan-binding lectin serine protease 2 (EC 3.4.21.104) (MBL-associated serine protease 2) (Mannose-binding protein-associated serine protease 2) (MASP-2) [Cleaved into: Mannan-binding lectin serine protease 2 A chain; Mannan-binding lectin serine protease 2 B chain]
ruditapes2_c972	"complement activation, classical pathway"	stress response	P	Mannan-binding lectin serine protease 2 (EC 3.4.21.104) (MBL-associated serine protease 2) (Mannose-binding protein-associated serine protease 2) (MASP-2) [Cleaved into: Mannan-binding lectin serine protease 2 A chain; Mannan-binding lectin serine protease 2 B chain]
ruditapes2_c972	"complement activation, classical pathway"	protein metabolism	P	Mannan-binding lectin serine protease 2 (EC 3.4.21.104) (MBL-associated serine protease 2) (Mannose-binding protein-associated serine protease 2) (MASP-2) [Cleaved into: Mannan-binding lectin serine protease 2 A chain; Mannan-binding lectin serine protease 2 B chain]
ruditapes2_c972	innate immune response	stress response	P	Mannan-binding lectin serine protease 2 (EC 3.4.21.104) (MBL-associated serine protease 2) (Mannose-binding protein-associated serine protease 2) (MASP-2) [Cleaved into: Mannan-binding lectin serine protease 2 A chain; Mannan-binding lectin serine protease 2 B chain]
ruditapes2_c3630	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	regulation of apoptosis	death	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	RNA metabolic process	RNA metabolism	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	viral reproduction	other biological processes	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	S phase of mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent"	other biological processes	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	M/G1 transition of mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	cell cycle checkpoint	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	protein polyubiquitination	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	cellular nitrogen compound metabolic process	other metabolic processes	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	apoptosis	death	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	gene expression	other metabolic processes	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	mRNA metabolic process	RNA metabolism	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	regulation of amino acid metabolic process	other metabolic processes	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes2_c3630	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55)
ruditapes_s37939	phosphorylation	other metabolic processes	P	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)
ruditapes_s37939	positive regulation of cell proliferation	cell cycle and proliferation	P	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)
ruditapes_s37939	cell division	other biological processes	P	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)
ruditapes_s37939	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)
ruditapes_s37939	regulation of S phase	cell cycle and proliferation	P	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)
ruditapes_s37939	cell cycle	cell cycle and proliferation	P	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)
ruditapes_s37939	mitotic cell cycle	cell cycle and proliferation	P	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)
ruditapes_s37939	DNA replication	DNA metabolism	P	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)
ruditapes_s37939	M/G1 transition of mitotic cell cycle	cell cycle and proliferation	P	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)
ruditapes_s37939	protein amino acid phosphorylation	protein metabolism	P	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)
ruditapes_s37939	cell cycle checkpoint	cell cycle and proliferation	P	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)
ruditapes_c19246	cytokine production	other biological processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	innate immune response	stress response	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	phosphorylation	other metabolic processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	phosphoinositide-mediated signaling	signal transduction	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	cell differentiation	other biological processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	T cell differentiation	developmental processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	mast cell degranulation	transport	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	phosphoinositide 3-kinase cascade	signal transduction	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	inflammatory response	stress response	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	mast cell chemotaxis	other biological processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	B cell receptor signaling pathway	signal transduction	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	adaptive immune response	other biological processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	T cell activation	other biological processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	signal transduction	signal transduction	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	mast cell differentiation	developmental processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	T cell receptor signaling pathway	signal transduction	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	respiratory burst during defense response	stress response	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	respiratory burst during defense response	other metabolic processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	natural killer cell differentiation	developmental processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	B cell homeostasis	other biological processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	neutrophil chemotaxis	other biological processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	chemotaxis	other biological processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	B cell activation	other biological processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	phosphoinositide phosphorylation	other metabolic processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	protein amino acid phosphorylation	protein metabolism	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	natural killer cell activation	other biological processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	T cell chemotaxis	other biological processes	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c19246	cell surface receptor linked signal transduction	signal transduction	P	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)"
ruditapes_c18235	cellular amine metabolic process	other metabolic processes	P	Sulfotransferase 1C2 (ST1C2) (EC 2.8.2.-) (Sulfotransferase 1C1) (SULT1C#1) (humSULTC2)
ruditapes_c18235	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase 1C2 (ST1C2) (EC 2.8.2.-) (Sulfotransferase 1C1) (SULT1C#1) (humSULTC2)
ruditapes_c18235	3'-phosphoadenosine 5'-phosphosulfate metabolic process	other metabolic processes	P	Sulfotransferase 1C2 (ST1C2) (EC 2.8.2.-) (Sulfotransferase 1C1) (SULT1C#1) (humSULTC2)
ruditapes_c18235	sulfation	other metabolic processes	P	Sulfotransferase 1C2 (ST1C2) (EC 2.8.2.-) (Sulfotransferase 1C1) (SULT1C#1) (humSULTC2)
ruditapes_c7963	ribosomal protein import into nucleus	transport	P	Importin-5 (Imp5) (Importin subunit beta-3) (Karyopherin beta-3) (Ran-binding protein 5) (RanBP5)
ruditapes_c7963	transport	transport	P	Importin-5 (Imp5) (Importin subunit beta-3) (Karyopherin beta-3) (Ran-binding protein 5) (RanBP5)
ruditapes_c7963	NLS-bearing substrate import into nucleus	transport	P	Importin-5 (Imp5) (Importin subunit beta-3) (Karyopherin beta-3) (Ran-binding protein 5) (RanBP5)
ruditapes_c7963	protein transport	transport	P	Importin-5 (Imp5) (Importin subunit beta-3) (Karyopherin beta-3) (Ran-binding protein 5) (RanBP5)
ruditapes_c7963	interspecies interaction between organisms	other biological processes	P	Importin-5 (Imp5) (Importin subunit beta-3) (Karyopherin beta-3) (Ran-binding protein 5) (RanBP5)
ruditapes_c7963	intracellular protein transport	transport	P	Importin-5 (Imp5) (Importin subunit beta-3) (Karyopherin beta-3) (Ran-binding protein 5) (RanBP5)
ruditapes_c20958	metabolic process	other metabolic processes	P	Beta-mannosidase (EC 3.2.1.25) (Lysosomal beta A mannosidase) (Mannanase) (Mannase)
ruditapes_c20958	protein modification process	protein metabolism	P	Beta-mannosidase (EC 3.2.1.25) (Lysosomal beta A mannosidase) (Mannanase) (Mannase)
ruditapes_c20958	carbohydrate metabolic process	other metabolic processes	P	Beta-mannosidase (EC 3.2.1.25) (Lysosomal beta A mannosidase) (Mannanase) (Mannase)
ruditapes_c18161	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	clustering of voltage-gated sodium channels	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	signal transduction	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	clustering of voltage-gated sodium channels	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	synapse organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	axon guidance	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c18161	axon guidance	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c477	cell death	death	P	Nucleolar protein 56 (Nucleolar protein 5A)
ruditapes2_c477	ribosome biogenesis	other biological processes	P	Nucleolar protein 56 (Nucleolar protein 5A)
ruditapes2_c477	rRNA processing	RNA metabolism	P	Nucleolar protein 56 (Nucleolar protein 5A)
ruditapes_c29465	phosphoinositide-mediated signaling	signal transduction	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta (PI3K-C2-beta) (PtdIns-3-kinase C2 subunit beta) (EC 2.7.1.154) (C2-PI3K) (Phosphoinositide 3-kinase-C2-beta)
ruditapes_c29465	biological_process	other biological processes	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta (PI3K-C2-beta) (PtdIns-3-kinase C2 subunit beta) (EC 2.7.1.154) (C2-PI3K) (Phosphoinositide 3-kinase-C2-beta)
ruditapes_c29465	protein kinase B signaling cascade	signal transduction	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta (PI3K-C2-beta) (PtdIns-3-kinase C2 subunit beta) (EC 2.7.1.154) (C2-PI3K) (Phosphoinositide 3-kinase-C2-beta)
ruditapes_c29465	phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta (PI3K-C2-beta) (PtdIns-3-kinase C2 subunit beta) (EC 2.7.1.154) (C2-PI3K) (Phosphoinositide 3-kinase-C2-beta)
ruditapes_c29465	cell communication	other biological processes	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta (PI3K-C2-beta) (PtdIns-3-kinase C2 subunit beta) (EC 2.7.1.154) (C2-PI3K) (Phosphoinositide 3-kinase-C2-beta)
ruditapes_c29465	lipid phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta (PI3K-C2-beta) (PtdIns-3-kinase C2 subunit beta) (EC 2.7.1.154) (C2-PI3K) (Phosphoinositide 3-kinase-C2-beta)
ruditapes_c29465	phosphoinositide phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta (PI3K-C2-beta) (PtdIns-3-kinase C2 subunit beta) (EC 2.7.1.154) (C2-PI3K) (Phosphoinositide 3-kinase-C2-beta)
ruditapes_c10367	learning or memory	other biological processes	P	Lysosomal alpha-mannosidase (Laman) (EC 3.2.1.24) (Lysosomal acid alpha-mannosidase) (Mannosidase alpha class 2B member 1) (Mannosidase alpha-B) [Cleaved into: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase B peptide; Lysosomal alpha-mannosidase C peptide; Lysosomal alpha-mannosidase D peptide; Lysosomal alpha-mannosidase E peptide]
ruditapes_c10367	metabolic process	other metabolic processes	P	Lysosomal alpha-mannosidase (Laman) (EC 3.2.1.24) (Lysosomal acid alpha-mannosidase) (Mannosidase alpha class 2B member 1) (Mannosidase alpha-B) [Cleaved into: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase B peptide; Lysosomal alpha-mannosidase C peptide; Lysosomal alpha-mannosidase D peptide; Lysosomal alpha-mannosidase E peptide]
ruditapes_c10367	protein deglycosylation	protein metabolism	P	Lysosomal alpha-mannosidase (Laman) (EC 3.2.1.24) (Lysosomal acid alpha-mannosidase) (Mannosidase alpha class 2B member 1) (Mannosidase alpha-B) [Cleaved into: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase B peptide; Lysosomal alpha-mannosidase C peptide; Lysosomal alpha-mannosidase D peptide; Lysosomal alpha-mannosidase E peptide]
ruditapes_c10367	protein modification process	protein metabolism	P	Lysosomal alpha-mannosidase (Laman) (EC 3.2.1.24) (Lysosomal acid alpha-mannosidase) (Mannosidase alpha class 2B member 1) (Mannosidase alpha-B) [Cleaved into: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase B peptide; Lysosomal alpha-mannosidase C peptide; Lysosomal alpha-mannosidase D peptide; Lysosomal alpha-mannosidase E peptide]
ruditapes_c10367	mannose metabolic process	other metabolic processes	P	Lysosomal alpha-mannosidase (Laman) (EC 3.2.1.24) (Lysosomal acid alpha-mannosidase) (Mannosidase alpha class 2B member 1) (Mannosidase alpha-B) [Cleaved into: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase B peptide; Lysosomal alpha-mannosidase C peptide; Lysosomal alpha-mannosidase D peptide; Lysosomal alpha-mannosidase E peptide]
ruditapes_c10367	carbohydrate metabolic process	other metabolic processes	P	Lysosomal alpha-mannosidase (Laman) (EC 3.2.1.24) (Lysosomal acid alpha-mannosidase) (Mannosidase alpha class 2B member 1) (Mannosidase alpha-B) [Cleaved into: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase B peptide; Lysosomal alpha-mannosidase C peptide; Lysosomal alpha-mannosidase D peptide; Lysosomal alpha-mannosidase E peptide]
ruditapes_c2958	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7)
ruditapes_c2958	DNA replication	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7)
ruditapes_c25855	transport	transport	P	Vacuolar protein sorting-associated protein 26 (VPS26 protein homolog)
ruditapes_c25855	vacuolar transport	transport	P	Vacuolar protein sorting-associated protein 26 (VPS26 protein homolog)
ruditapes_c25855	protein transport	transport	P	Vacuolar protein sorting-associated protein 26 (VPS26 protein homolog)
ruditapes2_c58	translation	protein metabolism	P	60S ribosomal protein L27a (Ribosomal protein RPL-27)
ruditapes_c610	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_c610	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_c610	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_c19116	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12) (Ubiquitin thioesterase)
ruditapes_c19116	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12) (Ubiquitin thioesterase)
ruditapes_c18123	transport	transport	P	Innexin unc-9 (Uncoordinated protein 9)
ruditapes_c18123	ion transport	transport	P	Innexin unc-9 (Uncoordinated protein 9)
ruditapes_c7909	memory	other biological processes	P	Peptidylglycine alpha-hydroxylating monooxygenase (dPHM) (EC 1.14.17.3)
ruditapes_c7909	oxidation reduction	other metabolic processes	P	Peptidylglycine alpha-hydroxylating monooxygenase (dPHM) (EC 1.14.17.3)
ruditapes_c7909	peptide metabolic process	other metabolic processes	P	Peptidylglycine alpha-hydroxylating monooxygenase (dPHM) (EC 1.14.17.3)
ruditapes_c18653	oxidation reduction	other metabolic processes	P	Peptidylglycine alpha-hydroxylating monooxygenase (dPHM) (EC 1.14.17.3)
ruditapes_c18653	memory	other biological processes	P	Peptidylglycine alpha-hydroxylating monooxygenase (dPHM) (EC 1.14.17.3)
ruditapes_c18653	peptide metabolic process	other metabolic processes	P	Peptidylglycine alpha-hydroxylating monooxygenase (dPHM) (EC 1.14.17.3)
ruditapes_lrc16018	locomotion	other biological processes	P	UPF0376 protein C03G6.5
ruditapes2_c1725	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Serine/threonine-protein kinase smg-1 (EC 2.7.11.1) (Suppressor with morphogenetic effect on genitalia protein 1)
ruditapes2_c1725	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase smg-1 (EC 2.7.11.1) (Suppressor with morphogenetic effect on genitalia protein 1)
ruditapes2_c1725	male genitalia development	developmental processes	P	Serine/threonine-protein kinase smg-1 (EC 2.7.11.1) (Suppressor with morphogenetic effect on genitalia protein 1)
ruditapes2_c1725	hermaphrodite genitalia development	developmental processes	P	Serine/threonine-protein kinase smg-1 (EC 2.7.11.1) (Suppressor with morphogenetic effect on genitalia protein 1)
ruditapes2_c571	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc34142	transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c26	transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c4997	proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c4997	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c571	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c4997	transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c571	transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c26	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c26	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c4997	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c4997	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c26	ion transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc34142	proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c571	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c26	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c4997	ion transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc34142	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc34142	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc34142	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c4997	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc34142	ion transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c571	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c571	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc34142	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc34142	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c4997	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c571	proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c26	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c26	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c571	ion transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c26	proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c12132	oxidation reduction	other metabolic processes	P	Putative D-amino-acid oxidase 1 (DAAO 1) (DAMOX 1) (DAO 1) (EC 1.4.3.-)
ruditapes_c23377	biological_process	other biological processes	P	Putative D-amino-acid oxidase 1 (DAAO 1) (DAMOX 1) (DAO 1) (EC 1.4.3.-)
ruditapes_c12132	biological_process	other biological processes	P	Putative D-amino-acid oxidase 1 (DAAO 1) (DAMOX 1) (DAO 1) (EC 1.4.3.-)
ruditapes_c23377	oxidation reduction	other metabolic processes	P	Putative D-amino-acid oxidase 1 (DAAO 1) (DAMOX 1) (DAO 1) (EC 1.4.3.-)
ruditapes_c15534	myosin filament assembly	cell organization and biogenesis	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c15534	phosphorylation	other metabolic processes	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c11868	muscle thick filament assembly	developmental processes	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c28963	protein amino acid phosphorylation	protein metabolism	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c28963	muscle thick filament assembly	developmental processes	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c28963	muscle thick filament assembly	cell organization and biogenesis	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c15534	locomotion	other biological processes	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c28963	phosphorylation	other metabolic processes	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c15534	vascular endothelial growth factor receptor signaling pathway	signal transduction	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c28963	vascular endothelial growth factor receptor signaling pathway	signal transduction	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c15534	protein amino acid phosphorylation	protein metabolism	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c11868	phosphorylation	other metabolic processes	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c28963	myosin filament assembly	cell organization and biogenesis	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c28963	locomotion	other biological processes	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c15534	regulation of Rho protein signal transduction	signal transduction	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c28963	regulation of Rho protein signal transduction	signal transduction	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c11868	regulation of Rho protein signal transduction	signal transduction	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c11868	locomotion	other biological processes	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c11868	myosin filament assembly	cell organization and biogenesis	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c11868	muscle thick filament assembly	cell organization and biogenesis	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c11868	vascular endothelial growth factor receptor signaling pathway	signal transduction	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c15534	muscle thick filament assembly	developmental processes	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c15534	muscle thick filament assembly	cell organization and biogenesis	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_c11868	protein amino acid phosphorylation	protein metabolism	P	Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
ruditapes_lrc32932	nematode larval development	developmental processes	P	60S ribosomal protein L7
ruditapes_lrc36173	growth	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc36173	reproduction	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc32722	growth	other biological processes	P	60S ribosomal protein L7
ruditapes_c4386	nematode larval development	developmental processes	P	60S ribosomal protein L7
ruditapes2_lrc3447	nematode larval development	developmental processes	P	60S ribosomal protein L7
ruditapes_c4386	growth	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc32932	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_lrc34372	growth	other biological processes	P	60S ribosomal protein L7
ruditapes2_lrc3447	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_lrc32932	growth	other biological processes	P	60S ribosomal protein L7
ruditapes2_lrc3447	growth	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc32932	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc32722	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc36173	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L7
ruditapes_c2889	growth	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc36173	nematode larval development	developmental processes	P	60S ribosomal protein L7
ruditapes2_lrc3447	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L7
ruditapes_lrc34372	reproduction	other biological processes	P	60S ribosomal protein L7
ruditapes_c2889	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc32932	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L7
ruditapes2_lrc3447	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L7
ruditapes2_lrc3447	reproduction	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc32932	reproduction	other biological processes	P	60S ribosomal protein L7
ruditapes_c4386	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L7
ruditapes2_lrc4117	nematode larval development	developmental processes	P	60S ribosomal protein L7
ruditapes_lrc36173	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L7
ruditapes_c4386	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_lrc34372	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_c4386	reproduction	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc32722	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L7
ruditapes_c2889	reproduction	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc32722	nematode larval development	developmental processes	P	60S ribosomal protein L7
ruditapes_lrc32722	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_c2889	nematode larval development	developmental processes	P	60S ribosomal protein L7
ruditapes_c4386	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L7
ruditapes2_lrc4117	growth	other biological processes	P	60S ribosomal protein L7
ruditapes_c2889	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_lrc34372	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc36173	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_lrc32722	reproduction	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc34372	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L7
ruditapes2_lrc4117	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_c2889	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L7
ruditapes2_lrc4117	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L7
ruditapes_lrc34372	nematode larval development	developmental processes	P	60S ribosomal protein L7
ruditapes2_lrc4117	reproduction	other biological processes	P	60S ribosomal protein L7
ruditapes2_lrc4117	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L7
ruditapes_c8972	transport	transport	P	Fatty acid-binding protein homolog 6
ruditapes_c8972	determination of adult life span	developmental processes	P	Fatty acid-binding protein homolog 6
ruditapes_c27287	proteolysis	protein metabolism	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	proteolysis	protein metabolism	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	regulation of Notch signaling pathway	signal transduction	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	amyloid precursor protein catabolic process	other metabolic processes	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	Notch receptor processing	signal transduction	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	cell-cell adhesion	cell adhesion	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	wing disc dorsal/ventral pattern formation	developmental processes	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	membrane protein ectodomain proteolysis	protein metabolism	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	beta-amyloid metabolic process	other metabolic processes	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	amyloid precursor protein catabolic process	other metabolic processes	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	Notch receptor processing	signal transduction	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	Notch receptor processing	protein metabolism	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	calcium ion transport	transport	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	anti-apoptosis	death	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	beta-amyloid metabolic process	other metabolic processes	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	membrane protein ectodomain proteolysis	protein metabolism	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	Notch signaling pathway	signal transduction	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	cytoskeleton organization	cell organization and biogenesis	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	wing disc dorsal/ventral pattern formation	developmental processes	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	cell-cell adhesion	cell adhesion	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	Notch receptor processing	protein metabolism	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	anti-apoptosis	death	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	regulation of Notch signaling pathway	signal transduction	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	cytoskeleton organization	cell organization and biogenesis	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c12256	calcium ion transport	transport	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c27287	Notch signaling pathway	signal transduction	P	Presenilin homolog (DmPS) (EC 3.4.23.-) (dPS)
ruditapes_c24764	olfactory behavior	other biological processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	chondroitin sulfate biosynthetic process	other metabolic processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	chondroitin sulfate biosynthetic process	other metabolic processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	"primary branching, open tracheal system"	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	segment polarity determination	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	"heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process"	other metabolic processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	"heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process"	other metabolic processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	inter-male aggressive behavior	other biological processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	smoothened signaling pathway	signal transduction	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	oxidation reduction	other metabolic processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	mesoderm migration	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	mesoderm migration	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	mushroom body development	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	Wnt receptor signaling pathway	signal transduction	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	Wnt receptor signaling pathway	signal transduction	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	"epithelial cell migration, open tracheal system"	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	glycosaminoglycan biosynthetic process	other metabolic processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	smoothened signaling pathway	signal transduction	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	"epithelial cell migration, open tracheal system"	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	cell surface receptor linked signal transduction	signal transduction	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	inter-male aggressive behavior	other biological processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	olfactory behavior	other biological processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	glycosaminoglycan biosynthetic process	other metabolic processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	oxidation reduction	other metabolic processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	mushroom body development	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	heart development	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	segment polarity determination	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	"primary branching, open tracheal system"	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	heart development	developmental processes	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c24764	fibroblast growth factor receptor signaling pathway	signal transduction	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	cell surface receptor linked signal transduction	signal transduction	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_c10630	fibroblast growth factor receptor signaling pathway	signal transduction	P	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)
ruditapes_lrc37177	microtubule-based process	other biological processes	P	"Dynein light chain LC6, flagellar outer arm"
ruditapes_c25785	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes_c2730	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes_c18788	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes_c31196	signal transduction	signal transduction	P	Beta-3 adrenergic receptor (Beta-3 adrenoreceptor) (Beta-3 adrenoceptor)
ruditapes_c31196	negative regulation of multicellular organism growth	other biological processes	P	Beta-3 adrenergic receptor (Beta-3 adrenoreceptor) (Beta-3 adrenoceptor)
ruditapes_c31196	brown fat cell differentiation	other biological processes	P	Beta-3 adrenergic receptor (Beta-3 adrenoreceptor) (Beta-3 adrenoceptor)
ruditapes_c31196	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Beta-3 adrenergic receptor (Beta-3 adrenoreceptor) (Beta-3 adrenoceptor)
ruditapes_c31196	heat generation	other biological processes	P	Beta-3 adrenergic receptor (Beta-3 adrenoreceptor) (Beta-3 adrenoceptor)
ruditapes_c31196	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Beta-3 adrenergic receptor (Beta-3 adrenoreceptor) (Beta-3 adrenoceptor)
ruditapes_c31196	positive regulation of MAPKKK cascade	signal transduction	P	Beta-3 adrenergic receptor (Beta-3 adrenoreceptor) (Beta-3 adrenoceptor)
ruditapes_c31196	diet induced thermogenesis	other metabolic processes	P	Beta-3 adrenergic receptor (Beta-3 adrenoreceptor) (Beta-3 adrenoceptor)
ruditapes_c31196	vasodilation by norepinephrine-epinephrine involved in regulation of systemic arterial blood pressure	other biological processes	P	Beta-3 adrenergic receptor (Beta-3 adrenoreceptor) (Beta-3 adrenoceptor)
ruditapes_c31196	G-protein coupled receptor protein signaling pathway	signal transduction	P	Beta-3 adrenergic receptor (Beta-3 adrenoreceptor) (Beta-3 adrenoceptor)
ruditapes_c31196	activation of adenylate cyclase activity	other metabolic processes	P	Beta-3 adrenergic receptor (Beta-3 adrenoreceptor) (Beta-3 adrenoceptor)
ruditapes_c11692	vagina development	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	mitochondrial fusion	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c11692	odontogenesis of dentine-containing tooth	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	regulation of neuron apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	positive regulation of pigmentation during development	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	positive regulation of calcium ion transport into cytosol	transport	P	Apoptosis regulator BAX
ruditapes_c11692	regulation of cell cycle	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c11692	protein insertion into mitochondrial membrane during induction of apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	negative regulation of peptidyl-serine phosphorylation	protein metabolism	P	Apoptosis regulator BAX
ruditapes_c11692	cleavage of lamin	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c11692	cleavage of lamin	death	P	Apoptosis regulator BAX
ruditapes_c11692	regulation of mammary gland epithelial cell proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c11692	regulation of mammary gland epithelial cell proliferation	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	germ cell development	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	cerebral cortex development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	response to wounding	stress response	P	Apoptosis regulator BAX
ruditapes_c11692	retinal cell programmed cell death	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	retinal cell programmed cell death	death	P	Apoptosis regulator BAX
ruditapes_c11692	protein insertion into mitochondrial membrane during induction of apoptosis	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c11692	positive regulation of apoptosis involved in mammary gland involution	death	P	Apoptosis regulator BAX
ruditapes_c11692	regulation of mitochondrial membrane potential	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	protein homooligomerization	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c11692	response to acid	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	nervous system development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	ovarian follicle development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	DNA fragmentation involved in apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	response to axon injury	stress response	P	Apoptosis regulator BAX
ruditapes_c11692	myeloid cell homeostasis	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	fertilization	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	cell proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c11692	positive regulation of apoptosis involved in mammary gland involution	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	regulation of caspase activity	death	P	Apoptosis regulator BAX
ruditapes_c11692	induction of apoptosis in response to chemical stimulus	death	P	Apoptosis regulator BAX
ruditapes_c11692	induction of apoptosis by extracellular signals	death	P	Apoptosis regulator BAX
ruditapes_c11692	response to salt stress	stress response	P	Apoptosis regulator BAX
ruditapes_c11692	DNA fragmentation involved in apoptosis	DNA metabolism	P	Apoptosis regulator BAX
ruditapes_c11692	DNA fragmentation involved in apoptosis	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c11692	reduction of endoplasmic reticulum calcium ion concentration	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	negative regulation of anti-apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	B cell apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	response to gamma radiation	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	response to DNA damage stimulus	stress response	P	Apoptosis regulator BAX
ruditapes_c11692	positive regulation of neuron apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	blood vessel remodeling	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	male gonad development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	Sertoli cell proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c11692	Sertoli cell proliferation	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	kidney development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	B cell homeostatic proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c11692	regulation of nitrogen utilization	other metabolic processes	P	Apoptosis regulator BAX
ruditapes_c11692	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c11692	sex differentiation	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	leukocyte homeostasis	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	mitochondrial fragmentation during apoptosis	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c11692	mitochondrial fragmentation during apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	neuron migration	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	activation of caspase activity by cytochrome c	death	P	Apoptosis regulator BAX
ruditapes_c11692	homeostasis of number of cells within a tissue	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	positive regulation of apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	development of secondary sexual characteristics	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	regulation of apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	apoptosis in response to endoplasmic reticulum stress	death	P	Apoptosis regulator BAX
ruditapes_c11692	response to toxin	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	hypothalamus development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	cellular response to UV	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	nuclear fragmentation during apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	homeostasis of number of cells	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	apoptotic mitochondrial changes	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c11692	apoptotic mitochondrial changes	death	P	Apoptosis regulator BAX
ruditapes_c11692	release of matrix enzymes from mitochondria	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c11692	release of matrix enzymes from mitochondria	death	P	Apoptosis regulator BAX
ruditapes_c11692	response to ionizing radiation	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	induction of apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	transformed cell apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	nuclear fragmentation during apoptosis	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c11692	establishment or maintenance of transmembrane electrochemical gradient	transport	P	Apoptosis regulator BAX
ruditapes_c11692	induction of apoptosis by intracellular signals	death	P	Apoptosis regulator BAX
ruditapes_c11692	post-embryonic development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	negative regulation of neuron apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	positive regulation of B cell apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	spermatid differentiation	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	induction of retinal programmed cell death	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	induction of retinal programmed cell death	death	P	Apoptosis regulator BAX
ruditapes_c11692	glycosphingolipid metabolic process	other metabolic processes	P	Apoptosis regulator BAX
ruditapes_c11692	T cell homeostatic proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c11692	limb morphogenesis	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	negative regulation of survival gene product expression	death	P	Apoptosis regulator BAX
ruditapes_c11692	spermatogenesis	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	neuron apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c11692	B cell homeostasis	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	retina development in camera-type eye	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	regulation of protein homodimerization activity	other biological processes	P	Apoptosis regulator BAX
ruditapes_c11692	regulation of mitochondrial membrane permeability	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c11692	post-embryonic camera-type eye morphogenesis	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Apoptosis regulator BAX
ruditapes_c11692	germ cell programmed cell death	death	P	Apoptosis regulator BAX
ruditapes_c11692	negative regulation of survival gene product expression	other metabolic processes	P	Apoptosis regulator BAX
ruditapes_c11692	activation of caspase activity	death	P	Apoptosis regulator BAX
ruditapes_c11692	release of cytochrome c from mitochondria	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c11692	release of cytochrome c from mitochondria	death	P	Apoptosis regulator BAX
ruditapes_c11692	negative regulation of cell proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c11692	B cell negative selection	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11692	regulation of mitochondrial membrane permeability	transport	P	Apoptosis regulator BAX
ruditapes_c30648	ion transport	transport	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta) (Fragment)"
ruditapes_c30648	transport	transport	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta) (Fragment)"
ruditapes_c30648	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta) (Fragment)"
ruditapes_c30648	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta) (Fragment)"
ruditapes_c30648	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta) (Fragment)"
ruditapes_c30648	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta) (Fragment)"
ruditapes_c30648	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta) (Fragment)"
ruditapes_c30648	proton transport	transport	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta) (Fragment)"
ruditapes_c18137	electron transport chain	other metabolic processes	P	"Alternative oxidase 3, mitochondrial (EC 1.10.3.11)"
ruditapes_c18137	oxidation reduction	other metabolic processes	P	"Alternative oxidase 3, mitochondrial (EC 1.10.3.11)"
ruditapes_c18137	transport	transport	P	"Alternative oxidase 3, mitochondrial (EC 1.10.3.11)"
ruditapes_c18137	respiratory gaseous exchange	other biological processes	P	"Alternative oxidase 3, mitochondrial (EC 1.10.3.11)"
ruditapes2_c3977	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear transcription factor Y subunit B-4 (AtNF-YB-4) (Transcriptional activator HAP3D)
ruditapes2_c3977	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear transcription factor Y subunit B-4 (AtNF-YB-4) (Transcriptional activator HAP3D)
ruditapes2_c1497	proteolysis	protein metabolism	P	Serine carboxypeptidase-like 31 (EC 3.4.16.-)
ruditapes_lrc11426	cellular aromatic compound metabolic process	other metabolic processes	P	"Choline monooxygenase, chloroplastic (EC 1.14.15.7)"
ruditapes_lrc11426	aromatic compound catabolic process	other metabolic processes	P	"Choline monooxygenase, chloroplastic (EC 1.14.15.7)"
ruditapes_lrc11426	oxidation reduction	other metabolic processes	P	"Choline monooxygenase, chloroplastic (EC 1.14.15.7)"
ruditapes_lrc11426	response to stress	stress response	P	"Choline monooxygenase, chloroplastic (EC 1.14.15.7)"
ruditapes_c15551	carbohydrate transport	transport	P	Sugar transport protein 7 (Hexose transporter 7)
ruditapes_c15551	transmembrane transport	transport	P	Sugar transport protein 7 (Hexose transporter 7)
ruditapes_c15551	transport	transport	P	Sugar transport protein 7 (Hexose transporter 7)
ruditapes_c23440	ribosome biogenesis	other biological processes	P	Putative nucleolar protein 5-3 (Nucleolar protein 58-3)
ruditapes_lrc29434	ribosome biogenesis	other biological processes	P	Putative nucleolar protein 5-3 (Nucleolar protein 58-3)
ruditapes_c10923	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-DAG synthase) (CDP-DG synthase) (CDP-diacylglycerol synthase) (CDS) (CDP-diglyceride pyrophosphorylase) (CDP-diglyceride synthase) (CTP:phosphatidate cytidylyltransferase)
ruditapes_c3675	peptidoglycan biosynthetic process	other metabolic processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c3675	regulation of cell shape	cell organization and biogenesis	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c3675	response to antibiotic	other biological processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c3675	cell wall organization	cell organization and biogenesis	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c3675	metabolic process	other metabolic processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c3675	peptidoglycan-based cell wall biogenesis	other biological processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c26266	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YulB
ruditapes_c26266	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YulB
ruditapes_c13683	oxidation reduction	other metabolic processes	P	Uncharacterized oxidoreductase YrpG (EC 1.-.-.-)
ruditapes2_c231	polysaccharide catabolic process	other metabolic processes	P	Putative sporulation-specific glycosylase YdhD (EC 3.2.-.-)
ruditapes2_c231	carbohydrate metabolic process	other metabolic processes	P	Putative sporulation-specific glycosylase YdhD (EC 3.2.-.-)
ruditapes2_c231	chitin catabolic process	other metabolic processes	P	Putative sporulation-specific glycosylase YdhD (EC 3.2.-.-)
ruditapes2_c231	metabolic process	other metabolic processes	P	Putative sporulation-specific glycosylase YdhD (EC 3.2.-.-)
ruditapes2_c231	cell wall macromolecule catabolic process	other metabolic processes	P	Putative sporulation-specific glycosylase YdhD (EC 3.2.-.-)
ruditapes2_c231	sporulation resulting in formation of a cellular spore	other biological processes	P	Putative sporulation-specific glycosylase YdhD (EC 3.2.-.-)
ruditapes2_c519	oxidation reduction	other metabolic processes	P	Pyruvate synthase subunit PorA (EC 1.2.7.1) (Pyruvate oxidoreductase alpha chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit alpha)
ruditapes2_c519	metabolic process	other metabolic processes	P	Pyruvate synthase subunit PorA (EC 1.2.7.1) (Pyruvate oxidoreductase alpha chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit alpha)
ruditapes_c20055	negative regulation of catalytic activity	other biological processes	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c13518	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c20055	positive regulation of catalytic activity	other biological processes	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c13518	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c13518	negative regulation of protein binding	other biological processes	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c20055	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c13518	positive regulation of catalytic activity	other biological processes	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c13518	pathogenesis	other biological processes	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c20055	negative regulation of protein binding	other biological processes	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c20055	pathogenesis	other biological processes	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c20055	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c13518	negative regulation of catalytic activity	other biological processes	P	Serine/threonine-protein kinase PknD (EC 2.7.11.1)
ruditapes_c27298	pathogenesis	other biological processes	P	Pesticidal crystal protein cry9Da (132 kDa crystal protein) (Crystaline entomocidal protoxin) (Insecticidal delta-endotoxin CryIXD(a))
ruditapes_c27298	sporulation resulting in formation of a cellular spore	other biological processes	P	Pesticidal crystal protein cry9Da (132 kDa crystal protein) (Crystaline entomocidal protoxin) (Insecticidal delta-endotoxin CryIXD(a))
ruditapes_c27298	defense response	stress response	P	Pesticidal crystal protein cry9Da (132 kDa crystal protein) (Crystaline entomocidal protoxin) (Insecticidal delta-endotoxin CryIXD(a))
ruditapes_c10138	growth	other biological processes	P	Phosphoglucosamine mutase (EC 5.4.2.10)
ruditapes_c10138	carbohydrate metabolic process	other metabolic processes	P	Phosphoglucosamine mutase (EC 5.4.2.10)
ruditapes_lrc22099	proteolysis	protein metabolism	P	Probable M18 family aminopeptidase 2 (EC 3.4.11.-)
ruditapes_c27755	transport	transport	P	Putative amino-acid transporter YisU
ruditapes_c27755	amino acid transport	transport	P	Putative amino-acid transporter YisU
ruditapes2_c2650	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YvdE
ruditapes2_c2650	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YvdE
ruditapes_c7053	oxidation reduction	other metabolic processes	P	Uncharacterized FAD-linked oxidoreductase YvdP (EC 1.21.-.-) (Spore coat protein YvdP)
ruditapes_c14664	sporulation resulting in formation of a cellular spore	other biological processes	P	Uncharacterized FAD-linked oxidoreductase YvdP (EC 1.21.-.-) (Spore coat protein YvdP)
ruditapes_c14664	oxidation reduction	other metabolic processes	P	Uncharacterized FAD-linked oxidoreductase YvdP (EC 1.21.-.-) (Spore coat protein YvdP)
ruditapes_c7053	sporulation resulting in formation of a cellular spore	other biological processes	P	Uncharacterized FAD-linked oxidoreductase YvdP (EC 1.21.-.-) (Spore coat protein YvdP)
ruditapes_c15577	transport	transport	P	Uncharacterized membrane protein YvdR
ruditapes_c23427	photosynthesis	other metabolic processes	P	Cytochrome c (Photosystem P840 reaction center cytochrome c-551)
ruditapes_c23427	electron transport chain	other metabolic processes	P	Cytochrome c (Photosystem P840 reaction center cytochrome c-551)
ruditapes_c23427	transport	transport	P	Cytochrome c (Photosystem P840 reaction center cytochrome c-551)
ruditapes_c18554	tRNA processing	RNA metabolism	P	tRNA-splicing endonuclease (EC 3.1.27.9) (tRNA-intron endonuclease)
ruditapes_c18554	"tRNA splicing, via endonucleolytic cleavage and ligation"	RNA metabolism	P	tRNA-splicing endonuclease (EC 3.1.27.9) (tRNA-intron endonuclease)
ruditapes2_c3219	response to stress	stress response	P	Stress response protein NhaX
ruditapes_s37546	metabolic process	other metabolic processes	P	Putative amidohydrolase YhaA (EC 3.5.1.-)
ruditapes_s39104	oxidation reduction	other metabolic processes	P	Putative Rieske 2Fe-2S iron-sulfur protein YhfW (EC 1.-.-.-)
ruditapes_s37361	metabolic process	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_s37361	phosphorylation	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_s37361	two-component signal transduction system (phosphorelay)	signal transduction	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_s37361	regulation of carbohydrate metabolic process	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_s37361	carbohydrate metabolic process	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_s37361	protein amino acid phosphorylation	protein metabolism	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_c9676	transport	transport	P	Indolepyruvate oxidoreductase subunit IorA (IOR) (EC 1.2.7.8) (Indolepyruvate ferredoxin oxidoreductase subunit alpha)
ruditapes_c9676	electron transport chain	other metabolic processes	P	Indolepyruvate oxidoreductase subunit IorA (IOR) (EC 1.2.7.8) (Indolepyruvate ferredoxin oxidoreductase subunit alpha)
ruditapes_c9676	oxidation reduction	other metabolic processes	P	Indolepyruvate oxidoreductase subunit IorA (IOR) (EC 1.2.7.8) (Indolepyruvate ferredoxin oxidoreductase subunit alpha)
ruditapes_c9676	metabolic process	other metabolic processes	P	Indolepyruvate oxidoreductase subunit IorA (IOR) (EC 1.2.7.8) (Indolepyruvate ferredoxin oxidoreductase subunit alpha)
ruditapes_c27637	ciliary or flagellar motility	other biological processes	P	Motility protein B (Chemotaxis protein MotB)
ruditapes_c27637	chemotaxis	other biological processes	P	Motility protein B (Chemotaxis protein MotB)
ruditapes_c1197	arginine biosynthetic process	other metabolic processes	P	Acetylornithine aminotransferase (ACOAT) (EC 2.6.1.11)
ruditapes_c1197	arginine metabolic process	other metabolic processes	P	Acetylornithine aminotransferase (ACOAT) (EC 2.6.1.11)
ruditapes_c1197	cellular amino acid biosynthetic process	other metabolic processes	P	Acetylornithine aminotransferase (ACOAT) (EC 2.6.1.11)
ruditapes_c28547	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c28547	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c28547	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c8173	isoprenoid biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c8173	oxidation reduction	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c8173	coenzyme A metabolic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c10369	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase MLL4 (EC 2.1.1.43) (Lysine N-methyltransferase 2B) (KMT2B) (Myeloid/lymphoid or mixed-lineage leukemia protein 4 homolog) (Trithorax homolog 2) (WW domain-binding protein 7) (WBP-7)
ruditapes_c10369	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase MLL4 (EC 2.1.1.43) (Lysine N-methyltransferase 2B) (KMT2B) (Myeloid/lymphoid or mixed-lineage leukemia protein 4 homolog) (Trithorax homolog 2) (WW domain-binding protein 7) (WBP-7)
ruditapes_c10369	"transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase MLL4 (EC 2.1.1.43) (Lysine N-methyltransferase 2B) (KMT2B) (Myeloid/lymphoid or mixed-lineage leukemia protein 4 homolog) (Trithorax homolog 2) (WW domain-binding protein 7) (WBP-7)
ruditapes_c10369	histone H3-K4 methylation	protein metabolism	P	Histone-lysine N-methyltransferase MLL4 (EC 2.1.1.43) (Lysine N-methyltransferase 2B) (KMT2B) (Myeloid/lymphoid or mixed-lineage leukemia protein 4 homolog) (Trithorax homolog 2) (WW domain-binding protein 7) (WBP-7)
ruditapes_c10369	histone H3-K4 methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase MLL4 (EC 2.1.1.43) (Lysine N-methyltransferase 2B) (KMT2B) (Myeloid/lymphoid or mixed-lineage leukemia protein 4 homolog) (Trithorax homolog 2) (WW domain-binding protein 7) (WBP-7)
ruditapes_c10369	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase MLL4 (EC 2.1.1.43) (Lysine N-methyltransferase 2B) (KMT2B) (Myeloid/lymphoid or mixed-lineage leukemia protein 4 homolog) (Trithorax homolog 2) (WW domain-binding protein 7) (WBP-7)
ruditapes2_c781	vesicle-mediated transport	transport	P	Clathrin light chain A (Lca)
ruditapes2_c781	intracellular protein transport	transport	P	Clathrin light chain A (Lca)
ruditapes_s38436	protein transport	transport	P	Nuclear pore complex protein Nup50 (50 kDa nucleoporin) (Nuclear pore-associated protein 60 kDa-like) (Nucleoporin Nup50)
ruditapes_s38436	neural tube formation	developmental processes	P	Nuclear pore complex protein Nup50 (50 kDa nucleoporin) (Nuclear pore-associated protein 60 kDa-like) (Nucleoporin Nup50)
ruditapes_s38436	intracellular transport	transport	P	Nuclear pore complex protein Nup50 (50 kDa nucleoporin) (Nuclear pore-associated protein 60 kDa-like) (Nucleoporin Nup50)
ruditapes_s38436	mRNA transport	transport	P	Nuclear pore complex protein Nup50 (50 kDa nucleoporin) (Nuclear pore-associated protein 60 kDa-like) (Nucleoporin Nup50)
ruditapes_s38436	transport	transport	P	Nuclear pore complex protein Nup50 (50 kDa nucleoporin) (Nuclear pore-associated protein 60 kDa-like) (Nucleoporin Nup50)
ruditapes_c12404	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Sequestosome-1 (Protein kinase C-zeta-interacting protein) (PKC-zeta-interacting protein) (Ubiquitin-binding protein p62)
ruditapes_c12404	apoptosis	death	P	Sequestosome-1 (Protein kinase C-zeta-interacting protein) (PKC-zeta-interacting protein) (Ubiquitin-binding protein p62)
ruditapes_c12404	cell differentiation	other biological processes	P	Sequestosome-1 (Protein kinase C-zeta-interacting protein) (PKC-zeta-interacting protein) (Ubiquitin-binding protein p62)
ruditapes_c12404	regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Sequestosome-1 (Protein kinase C-zeta-interacting protein) (PKC-zeta-interacting protein) (Ubiquitin-binding protein p62)
ruditapes_c12404	macroautophagy	stress response	P	Sequestosome-1 (Protein kinase C-zeta-interacting protein) (PKC-zeta-interacting protein) (Ubiquitin-binding protein p62)
ruditapes_c12404	macroautophagy	other metabolic processes	P	Sequestosome-1 (Protein kinase C-zeta-interacting protein) (PKC-zeta-interacting protein) (Ubiquitin-binding protein p62)
ruditapes_lrc35697	negative chemotaxis	other biological processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	dichotomous subdivision of terminal units involved in salivary gland branching	developmental processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	axon guidance	developmental processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	axon guidance	cell organization and biogenesis	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	regulation of heart rate	other biological processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	apoptosis	death	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	nervous system development	developmental processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	multicellular organismal development	developmental processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	axonal fasciculation	developmental processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	axonal fasciculation	cell organization and biogenesis	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	regulation of axon extension involved in axon guidance	developmental processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	regulation of axon extension involved in axon guidance	cell organization and biogenesis	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	negative regulation of axon extension involved in axon guidance	developmental processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	negative regulation of axon extension involved in axon guidance	cell organization and biogenesis	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	negative regulation of epithelial cell migration	other biological processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	negative regulation of axon extension	developmental processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	negative regulation of axon extension	cell organization and biogenesis	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_lrc35697	cell differentiation	other biological processes	P	Semaphorin-3A (Semaphorin III) (Sema III) (Semaphorin-D) (Sema D)
ruditapes_c3987	bile acid and bile salt transport	transport	P	Sodium/bile acid cotransporter (Na(+)/bile acid cotransporter) (Na(+)/taurocholate transport protein) (Sodium/taurocholate cotransporting polypeptide) (Solute carrier family 10 member 1)
ruditapes_c3987	transport	transport	P	Sodium/bile acid cotransporter (Na(+)/bile acid cotransporter) (Na(+)/taurocholate transport protein) (Sodium/taurocholate cotransporting polypeptide) (Solute carrier family 10 member 1)
ruditapes_c3987	ion transport	transport	P	Sodium/bile acid cotransporter (Na(+)/bile acid cotransporter) (Na(+)/taurocholate transport protein) (Sodium/taurocholate cotransporting polypeptide) (Solute carrier family 10 member 1)
ruditapes_c3987	sodium ion transport	transport	P	Sodium/bile acid cotransporter (Na(+)/bile acid cotransporter) (Na(+)/taurocholate transport protein) (Sodium/taurocholate cotransporting polypeptide) (Solute carrier family 10 member 1)
ruditapes_c3987	organic anion transport	transport	P	Sodium/bile acid cotransporter (Na(+)/bile acid cotransporter) (Na(+)/taurocholate transport protein) (Sodium/taurocholate cotransporting polypeptide) (Solute carrier family 10 member 1)
ruditapes_c24747	signal transduction	signal transduction	P	Netrin receptor UNC5A (Protein unc-5 homolog 1) (Protein unc-5 homolog A)
ruditapes_c24747	apoptosis	death	P	Netrin receptor UNC5A (Protein unc-5 homolog 1) (Protein unc-5 homolog A)
ruditapes_c24747	multicellular organismal development	developmental processes	P	Netrin receptor UNC5A (Protein unc-5 homolog 1) (Protein unc-5 homolog A)
ruditapes_c24747	axon guidance	developmental processes	P	Netrin receptor UNC5A (Protein unc-5 homolog 1) (Protein unc-5 homolog A)
ruditapes_c24747	axon guidance	cell organization and biogenesis	P	Netrin receptor UNC5A (Protein unc-5 homolog 1) (Protein unc-5 homolog A)
ruditapes_c16910	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c16910	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c16910	neuron projection development	cell organization and biogenesis	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c1300	G-protein coupled receptor protein signaling pathway	signal transduction	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c16910	phosphatidylinositol metabolic process	other metabolic processes	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c16910	G-protein coupled receptor protein signaling pathway	signal transduction	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c1300	elevation of cytosolic calcium ion concentration	other biological processes	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c16910	inositol phosphate metabolic process	other metabolic processes	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c16910	elevation of cytosolic calcium ion concentration	other biological processes	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c16910	neuron projection development	developmental processes	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c1300	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c1300	signal transduction	signal transduction	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c16910	signal transduction	signal transduction	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c1300	neuron projection development	developmental processes	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c1300	neuron projection development	cell organization and biogenesis	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c1300	inositol phosphate metabolic process	other metabolic processes	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c1300	phosphatidylinositol metabolic process	other metabolic processes	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c1300	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Galanin receptor type 2 (GAL2-R) (GALR-2)
ruditapes_c18745	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB11 (RNA polymerase II subunit B11) (DNA-directed RNA polymerase II subunit J) (RNA polymerase II 13.3 kDa subunit) (RPB14)
ruditapes_c29091	zymogen activation	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Brain-specific serine protease 3) (BSSP-3) (Motopsin) (Serine protease 12)
ruditapes_c18394	zymogen activation	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Brain-specific serine protease 3) (BSSP-3) (Motopsin) (Serine protease 12)
ruditapes_c10357	proteolysis	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Brain-specific serine protease 3) (BSSP-3) (Motopsin) (Serine protease 12)
ruditapes_c29091	proteolysis	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Brain-specific serine protease 3) (BSSP-3) (Motopsin) (Serine protease 12)
ruditapes_c10357	zymogen activation	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Brain-specific serine protease 3) (BSSP-3) (Motopsin) (Serine protease 12)
ruditapes_c18394	proteolysis	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Brain-specific serine protease 3) (BSSP-3) (Motopsin) (Serine protease 12)
ruditapes2_c6758	JAK-STAT cascade	signal transduction	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	transmembrane calcium ion transport	transport	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	cell cycle arrest	cell cycle and proliferation	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	cartilage condensation	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	cartilage condensation	cell adhesion	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	protein export from nucleus	transport	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	detection of mechanical stimulus	other biological processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	heart development	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	heart development	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	calcium ion transport	transport	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	in utero embryonic development	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	neuropeptide signaling pathway	signal transduction	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	neuropeptide signaling pathway	signal transduction	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	peptidyl-serine phosphorylation	protein metabolism	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	protein export from nucleus	transport	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	detection of mechanical stimulus	other biological processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	cell cycle arrest	cell cycle and proliferation	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	blood vessel development	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	blood vessel development	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	calcium ion transport	transport	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	cell-cell adhesion	cell adhesion	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	in utero embryonic development	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	cell-cell adhesion	cell adhesion	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	transmembrane calcium ion transport	transport	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	peptidyl-serine phosphorylation	protein metabolism	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	cartilage condensation	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes2_c6758	cartilage condensation	cell adhesion	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_c16432	JAK-STAT cascade	signal transduction	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein homolog)
ruditapes_lrc18933	regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Inhibitor of apoptosis protein 1) (IAP-1) (mIAP-1) (mIAP1)
ruditapes_c7995	regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Inhibitor of apoptosis protein 1) (IAP-1) (mIAP-1) (mIAP1)
ruditapes_c7995	apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Inhibitor of apoptosis protein 1) (IAP-1) (mIAP-1) (mIAP1)
ruditapes_lrc18933	apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Inhibitor of apoptosis protein 1) (IAP-1) (mIAP-1) (mIAP1)
ruditapes_c18391	G-protein coupled receptor protein signaling pathway	signal transduction	P	Chemokine-binding protein 2 (C-C chemokine receptor D6) (CCR10-related receptor) (Chemokine-binding protein D6)
ruditapes_c18391	signal transduction	signal transduction	P	Chemokine-binding protein 2 (C-C chemokine receptor D6) (CCR10-related receptor) (Chemokine-binding protein D6)
ruditapes_c12731	cellular calcium ion homeostasis	other biological processes	P	Chorion-specific transcription factor GCMb (mGCMb) (GCM motif protein 2) (Glial cells missing homolog 2)
ruditapes_c12731	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chorion-specific transcription factor GCMb (mGCMb) (GCM motif protein 2) (Glial cells missing homolog 2)
ruditapes_c12731	"transcription, DNA-dependent"	RNA metabolism	P	Chorion-specific transcription factor GCMb (mGCMb) (GCM motif protein 2) (Glial cells missing homolog 2)
ruditapes_c12731	cellular phosphate ion homeostasis	other biological processes	P	Chorion-specific transcription factor GCMb (mGCMb) (GCM motif protein 2) (Glial cells missing homolog 2)
ruditapes_c12731	negative regulation of apoptosis	death	P	Chorion-specific transcription factor GCMb (mGCMb) (GCM motif protein 2) (Glial cells missing homolog 2)
ruditapes_c12731	parathyroid gland development	developmental processes	P	Chorion-specific transcription factor GCMb (mGCMb) (GCM motif protein 2) (Glial cells missing homolog 2)
ruditapes_c12731	multicellular organismal development	developmental processes	P	Chorion-specific transcription factor GCMb (mGCMb) (GCM motif protein 2) (Glial cells missing homolog 2)
ruditapes_c12731	cell differentiation	other biological processes	P	Chorion-specific transcription factor GCMb (mGCMb) (GCM motif protein 2) (Glial cells missing homolog 2)
ruditapes2_c4045	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes2_c3182	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes_c29577	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes2_c77	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes2_c4045	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes2_c4045	biological_process	other biological processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes2_c3182	biological_process	other biological processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes2_c3182	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes2_c77	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes_c29577	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes_c29577	biological_process	other biological processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes2_c77	biological_process	other biological processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 15.6) (Np15.6) (p15.6)"
ruditapes2_c2653	L-ascorbic acid biosynthetic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R) (p28)
ruditapes2_c2653	xenobiotic catabolic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R) (p28)
ruditapes_c10057	xenobiotic catabolic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R) (p28)
ruditapes_c10057	L-ascorbic acid biosynthetic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R) (p28)
ruditapes_c10057	metabolic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R) (p28)
ruditapes2_c2653	metabolic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R) (p28)
ruditapes2_c2653	L-ascorbic acid metabolic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R) (p28)
ruditapes2_c2653	oxidation reduction	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R) (p28)
ruditapes_c10057	L-ascorbic acid metabolic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R) (p28)
ruditapes_c10057	oxidation reduction	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R) (p28)
ruditapes_s40204	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33126	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc5256	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33235	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc37978	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33209	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4123	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_c25453	interspecies interaction between organisms	other biological processes	P	Glycoprotein G
ruditapes2_c3337	cell adhesion	cell adhesion	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes_c33308	cell adhesion	cell adhesion	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes_c12890	methylation	other metabolic processes	P	Protein-S-isoprenylcysteine O-methyltransferase (EC 2.1.1.100) (Farnesyl cysteine carboxyl methyltransferase) (FCMT) (Isoprenylcysteine carboxylmethyltransferase) (Prenylated protein carboxyl methyltransferase) (PPMT) (Prenylcysteine carboxyl methyltransferase) (pcCMT)
ruditapes_c12890	C-terminal protein amino acid methylation	protein metabolism	P	Protein-S-isoprenylcysteine O-methyltransferase (EC 2.1.1.100) (Farnesyl cysteine carboxyl methyltransferase) (FCMT) (Isoprenylcysteine carboxylmethyltransferase) (Prenylated protein carboxyl methyltransferase) (PPMT) (Prenylcysteine carboxyl methyltransferase) (pcCMT)
ruditapes_c29167	regulation of signal transduction	signal transduction	P	Tyrosine-protein phosphatase non-receptor type 1 (EC 3.1.3.48) (CPTP1) (Protein-tyrosine phosphatase 1B) (PTP-1B)
ruditapes_c29167	actin cytoskeleton reorganization	cell organization and biogenesis	P	Tyrosine-protein phosphatase non-receptor type 1 (EC 3.1.3.48) (CPTP1) (Protein-tyrosine phosphatase 1B) (PTP-1B)
ruditapes_c29167	insulin receptor signaling pathway	signal transduction	P	Tyrosine-protein phosphatase non-receptor type 1 (EC 3.1.3.48) (CPTP1) (Protein-tyrosine phosphatase 1B) (PTP-1B)
ruditapes_c29167	dephosphorylation	other metabolic processes	P	Tyrosine-protein phosphatase non-receptor type 1 (EC 3.1.3.48) (CPTP1) (Protein-tyrosine phosphatase 1B) (PTP-1B)
ruditapes_c29167	protein amino acid dephosphorylation	protein metabolism	P	Tyrosine-protein phosphatase non-receptor type 1 (EC 3.1.3.48) (CPTP1) (Protein-tyrosine phosphatase 1B) (PTP-1B)
ruditapes_c29167	regulation of endocytosis	transport	P	Tyrosine-protein phosphatase non-receptor type 1 (EC 3.1.3.48) (CPTP1) (Protein-tyrosine phosphatase 1B) (PTP-1B)
ruditapes_c29167	regulation of endocytosis	cell organization and biogenesis	P	Tyrosine-protein phosphatase non-receptor type 1 (EC 3.1.3.48) (CPTP1) (Protein-tyrosine phosphatase 1B) (PTP-1B)
ruditapes2_c4312	translation	protein metabolism	P	40S ribosomal protein S12
ruditapes_c34269	lipid metabolic process	other metabolic processes	P	Proactivator polypeptide [Cleaved into: Saposin-A; Saposin-B; Saposin-C; Saposin-D]
ruditapes_c15636	lipid metabolic process	other metabolic processes	P	Proactivator polypeptide [Cleaved into: Saposin-A; Saposin-B; Saposin-C; Saposin-D]
ruditapes_c34269	sphingolipid metabolic process	other metabolic processes	P	Proactivator polypeptide [Cleaved into: Saposin-A; Saposin-B; Saposin-C; Saposin-D]
ruditapes_c15636	sphingolipid metabolic process	other metabolic processes	P	Proactivator polypeptide [Cleaved into: Saposin-A; Saposin-B; Saposin-C; Saposin-D]
ruditapes_lrc28795	cell differentiation	other biological processes	P	Ephrin-B1 (ELK ligand) (ELK-L) (EPH-related receptor tyrosine kinase ligand 2) (LERK-2) (XlERK)
ruditapes_lrc28795	multicellular organismal development	developmental processes	P	Ephrin-B1 (ELK ligand) (ELK-L) (EPH-related receptor tyrosine kinase ligand 2) (LERK-2) (XlERK)
ruditapes_lrc28795	nervous system development	developmental processes	P	Ephrin-B1 (ELK ligand) (ELK-L) (EPH-related receptor tyrosine kinase ligand 2) (LERK-2) (XlERK)
ruditapes_c28225	histone acetylation	protein metabolism	P	Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72)
ruditapes_c28225	histone acetylation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72)
ruditapes_c28225	transcription initiation from RNA polymerase II promoter	RNA metabolism	P	Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72)
ruditapes_c28225	transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72)
ruditapes_c28225	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72)
ruditapes_c28225	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72)
ruditapes_c28225	chromatin remodeling	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72)
ruditapes_c9692	microtubule-based movement	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	ascospore formation	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	horsetail nuclear movement	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	horsetail nuclear movement	transport	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	synapsis	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	synapsis	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	sister chromatid biorientation	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	sister chromatid biorientation	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	reciprocal meiotic recombination	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	reciprocal meiotic recombination	DNA metabolism	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	nuclear migration during conjugation with cellular fusion	transport	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	nuclear migration during conjugation with cellular fusion	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c9692	regulation of karyogamy	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c1665	rRNA processing	RNA metabolism	P	rRNA-processing protein fcf1
ruditapes2_c1665	ribosome biogenesis	other biological processes	P	rRNA-processing protein fcf1
ruditapes2_c6	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized transcriptional regulatory protein C27B12.11c
ruditapes2_c6	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized transcriptional regulatory protein C27B12.11c
ruditapes_c14727	DNA recombination	DNA metabolism	P	Structural maintenance of chromosomes protein 5 (DNA repair protein spr18) (SMC partner of rad18)
ruditapes_c14727	response to DNA damage stimulus	stress response	P	Structural maintenance of chromosomes protein 5 (DNA repair protein spr18) (SMC partner of rad18)
ruditapes_c14727	meiosis	cell cycle and proliferation	P	Structural maintenance of chromosomes protein 5 (DNA repair protein spr18) (SMC partner of rad18)
ruditapes_c14727	replication fork protection	DNA metabolism	P	Structural maintenance of chromosomes protein 5 (DNA repair protein spr18) (SMC partner of rad18)
ruditapes_c14727	double-strand break repair via homologous recombination	stress response	P	Structural maintenance of chromosomes protein 5 (DNA repair protein spr18) (SMC partner of rad18)
ruditapes_c14727	double-strand break repair via homologous recombination	DNA metabolism	P	Structural maintenance of chromosomes protein 5 (DNA repair protein spr18) (SMC partner of rad18)
ruditapes_c14727	DNA repair	stress response	P	Structural maintenance of chromosomes protein 5 (DNA repair protein spr18) (SMC partner of rad18)
ruditapes_c14727	DNA repair	DNA metabolism	P	Structural maintenance of chromosomes protein 5 (DNA repair protein spr18) (SMC partner of rad18)
ruditapes_c15180	protein transport	transport	P	Vacuolar protein sorting-associated protein 8 (Vacuolar protein-targeting protein 8)
ruditapes_c15180	late endosome to vacuole transport	transport	P	Vacuolar protein sorting-associated protein 8 (Vacuolar protein-targeting protein 8)
ruditapes_c15180	transport	transport	P	Vacuolar protein sorting-associated protein 8 (Vacuolar protein-targeting protein 8)
ruditapes_c20811	regulation of phosphoprotein phosphatase activity	other metabolic processes	P	Uncharacterized protein C17A5.09c
ruditapes_c20811	regulation of signal transduction	signal transduction	P	Uncharacterized protein C17A5.09c
ruditapes_c20811	regulation of protein amino acid dephosphorylation	protein metabolism	P	Uncharacterized protein C17A5.09c
ruditapes_s39604	cellular protein localization	other biological processes	P	Hid-1 family protein C17A5.16 (Down-regulated in multiple cancers 1 homolog 3)
ruditapes_c26972	cell division	other biological processes	P	Caffeine-induced protein 16
ruditapes_c26972	mitosis	cell organization and biogenesis	P	Caffeine-induced protein 16
ruditapes_c26972	cell cycle	cell cycle and proliferation	P	Caffeine-induced protein 16
ruditapes_c26972	mitosis	cell cycle and proliferation	P	Caffeine-induced protein 16
ruditapes_c22656	transmembrane transport	transport	P	Uncharacterized mitochondrial carrier C19G12.05
ruditapes_c22656	mitochondrial citrate transport	transport	P	Uncharacterized mitochondrial carrier C19G12.05
ruditapes_c22656	transport	transport	P	Uncharacterized mitochondrial carrier C19G12.05
ruditapes_c30887	negative regulation of telomerase activity	other biological processes	P	Protection of telomeres protein poz1 (Pot1-associated protein poz1)
ruditapes_c30887	negative regulation of telomere maintenance via telomerase	DNA metabolism	P	Protection of telomeres protein poz1 (Pot1-associated protein poz1)
ruditapes_c30887	negative regulation of telomere maintenance via telomerase	cell organization and biogenesis	P	Protection of telomeres protein poz1 (Pot1-associated protein poz1)
ruditapes_c30887	negative regulation of DNA recombination at telomere	DNA metabolism	P	Protection of telomeres protein poz1 (Pot1-associated protein poz1)
ruditapes_c30887	negative regulation of DNA recombination at telomere	cell organization and biogenesis	P	Protection of telomeres protein poz1 (Pot1-associated protein poz1)
ruditapes_c30887	telomere capping	DNA metabolism	P	Protection of telomeres protein poz1 (Pot1-associated protein poz1)
ruditapes_c30887	telomere capping	cell organization and biogenesis	P	Protection of telomeres protein poz1 (Pot1-associated protein poz1)
ruditapes2_c1852	oxidation reduction	other metabolic processes	P	Uncharacterized hydrolase C22A12.06c (EC 3.1.-.-)
ruditapes2_c1852	lipid metabolic process	other metabolic processes	P	Uncharacterized hydrolase C22A12.06c (EC 3.1.-.-)
ruditapes2_c1777	response to DNA damage stimulus	stress response	P	Bifunctional polynucleotide phosphatase/kinase (DNA 5'-kinase/3'-phosphatase) (Polynucleotide kinase-3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)]
ruditapes2_c1777	"nucleotide-excision repair, DNA damage removal"	stress response	P	Bifunctional polynucleotide phosphatase/kinase (DNA 5'-kinase/3'-phosphatase) (Polynucleotide kinase-3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)]
ruditapes2_c1777	"nucleotide-excision repair, DNA damage removal"	DNA metabolism	P	Bifunctional polynucleotide phosphatase/kinase (DNA 5'-kinase/3'-phosphatase) (Polynucleotide kinase-3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)]
ruditapes2_c1777	phosphorylation	other metabolic processes	P	Bifunctional polynucleotide phosphatase/kinase (DNA 5'-kinase/3'-phosphatase) (Polynucleotide kinase-3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)]
ruditapes2_c1777	metabolic process	other metabolic processes	P	Bifunctional polynucleotide phosphatase/kinase (DNA 5'-kinase/3'-phosphatase) (Polynucleotide kinase-3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)]
ruditapes2_c1777	DNA repair	stress response	P	Bifunctional polynucleotide phosphatase/kinase (DNA 5'-kinase/3'-phosphatase) (Polynucleotide kinase-3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)]
ruditapes2_c1777	DNA repair	DNA metabolism	P	Bifunctional polynucleotide phosphatase/kinase (DNA 5'-kinase/3'-phosphatase) (Polynucleotide kinase-3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)]
ruditapes_c15086	cellular cobalt ion homeostasis	other biological processes	P	Zinc homeostasis factor 1
ruditapes_c15086	transport	transport	P	Zinc homeostasis factor 1
ruditapes_c15086	cellular zinc ion homeostasis	other biological processes	P	Zinc homeostasis factor 1
ruditapes_c15086	transmembrane transport	transport	P	Zinc homeostasis factor 1
ruditapes_c15086	ion transport	transport	P	Zinc homeostasis factor 1
ruditapes_c15086	cellular cadmium ion homeostasis	other biological processes	P	Zinc homeostasis factor 1
ruditapes_c15086	zinc ion transport	transport	P	Zinc homeostasis factor 1
ruditapes_c15086	cation transport	transport	P	Zinc homeostasis factor 1
ruditapes_c15035	histone deacetylation	protein metabolism	P	Paired amphipathic helix protein pst2 (SIN3 homolog 2)
ruditapes_c15035	histone deacetylation	cell organization and biogenesis	P	Paired amphipathic helix protein pst2 (SIN3 homolog 2)
ruditapes_c15035	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Paired amphipathic helix protein pst2 (SIN3 homolog 2)
ruditapes_c15035	chromatin remodeling	cell organization and biogenesis	P	Paired amphipathic helix protein pst2 (SIN3 homolog 2)
ruditapes_c15035	chromatin silencing	RNA metabolism	P	Paired amphipathic helix protein pst2 (SIN3 homolog 2)
ruditapes_c15035	"transcription, DNA-dependent"	RNA metabolism	P	Paired amphipathic helix protein pst2 (SIN3 homolog 2)
ruditapes_c15035	chromatin modification	cell organization and biogenesis	P	Paired amphipathic helix protein pst2 (SIN3 homolog 2)
ruditapes_c15035	chromosome condensation	cell organization and biogenesis	P	Paired amphipathic helix protein pst2 (SIN3 homolog 2)
ruditapes_c944	tRNA processing	RNA metabolism	P	Mitochondrial tRNA-specific 2-thiouridylase 1 (EC 2.8.1.-)
ruditapes_c944	mitochondrial translation	protein metabolism	P	Mitochondrial tRNA-specific 2-thiouridylase 1 (EC 2.8.1.-)
ruditapes_c944	mitochondrial translation	cell organization and biogenesis	P	Mitochondrial tRNA-specific 2-thiouridylase 1 (EC 2.8.1.-)
ruditapes2_c2084	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase srb10 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8) (Suppressor of RNA polymerase B srb10)
ruditapes2_c2084	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase srb10 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8) (Suppressor of RNA polymerase B srb10)
ruditapes2_c2084	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Serine/threonine-protein kinase srb10 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8) (Suppressor of RNA polymerase B srb10)
ruditapes2_c2084	activation of bipolar cell growth	other biological processes	P	Serine/threonine-protein kinase srb10 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8) (Suppressor of RNA polymerase B srb10)
ruditapes2_c2084	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Serine/threonine-protein kinase srb10 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8) (Suppressor of RNA polymerase B srb10)
ruditapes2_c2084	"transcription, DNA-dependent"	RNA metabolism	P	Serine/threonine-protein kinase srb10 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8) (Suppressor of RNA polymerase B srb10)
ruditapes2_c2084	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase srb10 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8) (Suppressor of RNA polymerase B srb10)
ruditapes_c22689	protein transport	transport	P	Nuclear envelope protein ndc1 (Cell untimely torn protein 11)
ruditapes_c22689	mRNA transport	transport	P	Nuclear envelope protein ndc1 (Cell untimely torn protein 11)
ruditapes_c22689	transport	transport	P	Nuclear envelope protein ndc1 (Cell untimely torn protein 11)
ruditapes_c30166	signal transduction	signal transduction	P	Probable Rho-type GTPase-activating protein 3
ruditapes_c30166	positive regulation of GTPase activity	other biological processes	P	Probable Rho-type GTPase-activating protein 3
ruditapes_c31284	peroxisome organization	cell organization and biogenesis	P	Uncharacterized protein C29A4.14c
ruditapes_c31284	protein targeting to peroxisome	transport	P	Uncharacterized protein C29A4.14c
ruditapes_c31284	protein targeting to peroxisome	cell organization and biogenesis	P	Uncharacterized protein C29A4.14c
ruditapes_c31284	protein import into peroxisome membrane	transport	P	Uncharacterized protein C29A4.14c
ruditapes_c31284	protein import into peroxisome membrane	cell organization and biogenesis	P	Uncharacterized protein C29A4.14c
ruditapes_c11340	histone lysine methylation	protein metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (Lysine N-methyltransferase 3) (SET domain-containing protein 2)"
ruditapes_c11340	histone lysine methylation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (Lysine N-methyltransferase 3) (SET domain-containing protein 2)"
ruditapes_c11340	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (Lysine N-methyltransferase 3) (SET domain-containing protein 2)"
ruditapes_c11340	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (Lysine N-methyltransferase 3) (SET domain-containing protein 2)"
ruditapes_c11340	histone methylation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (Lysine N-methyltransferase 3) (SET domain-containing protein 2)"
ruditapes_c11340	histone H3-K36 methylation	protein metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (Lysine N-methyltransferase 3) (SET domain-containing protein 2)"
ruditapes_c11340	histone H3-K36 methylation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (Lysine N-methyltransferase 3) (SET domain-containing protein 2)"
ruditapes_c11340	histone methylation	protein metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (Lysine N-methyltransferase 3) (SET domain-containing protein 2)"
ruditapes_c11340	methylation	other metabolic processes	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (Lysine N-methyltransferase 3) (SET domain-containing protein 2)"
ruditapes_c11340	RNA elongation from RNA polymerase II promoter	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (Lysine N-methyltransferase 3) (SET domain-containing protein 2)"
ruditapes_c11340	"transcription, DNA-dependent"	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (Lysine N-methyltransferase 3) (SET domain-containing protein 2)"
ruditapes_c21730	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase ppk11 (EC 2.7.11.1)
ruditapes_c21730	activation of bipolar cell growth	other biological processes	P	Serine/threonine-protein kinase ppk11 (EC 2.7.11.1)
ruditapes_c21730	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ppk11 (EC 2.7.11.1)
ruditapes_c26738	D-xylose catabolic process	other metabolic processes	P	Uncharacterized oxidoreductase C2F3.05c (EC 1.-.-.-)
ruditapes_c26738	oxidation reduction	other metabolic processes	P	Uncharacterized oxidoreductase C2F3.05c (EC 1.-.-.-)
ruditapes_c26738	cellular response to stress	stress response	P	Uncharacterized oxidoreductase C2F3.05c (EC 1.-.-.-)
ruditapes_c26738	arabinose catabolic process	other metabolic processes	P	Uncharacterized oxidoreductase C2F3.05c (EC 1.-.-.-)
ruditapes_c30573	"retrograde transport, endosome to Golgi"	transport	P	Vacuolar protein sorting-associated protein 54
ruditapes_c30573	transport	transport	P	Vacuolar protein sorting-associated protein 54
ruditapes_c30573	protein transport	transport	P	Vacuolar protein sorting-associated protein 54
ruditapes_c30573	Golgi to vacuole transport	transport	P	Vacuolar protein sorting-associated protein 54
ruditapes_c30573	vesicle-mediated transport	transport	P	Vacuolar protein sorting-associated protein 54
ruditapes_c30573	intracellular protein transport	transport	P	Vacuolar protein sorting-associated protein 54
ruditapes_lrc27029	ion transport	transport	P	Probable Na(+)/H(+) antiporter C3A11.09
ruditapes_lrc27029	cellular potassium ion homeostasis	other biological processes	P	Probable Na(+)/H(+) antiporter C3A11.09
ruditapes_lrc27029	transmembrane transport	transport	P	Probable Na(+)/H(+) antiporter C3A11.09
ruditapes_lrc27029	cation transport	transport	P	Probable Na(+)/H(+) antiporter C3A11.09
ruditapes_lrc27029	proton transport	transport	P	Probable Na(+)/H(+) antiporter C3A11.09
ruditapes_lrc27029	sodium ion transport	transport	P	Probable Na(+)/H(+) antiporter C3A11.09
ruditapes_lrc27029	transport	transport	P	Probable Na(+)/H(+) antiporter C3A11.09
ruditapes_c20772	metabolic process	other metabolic processes	P	Trehalose-phosphatase (EC 3.1.3.12) (Trehalose synthase complex catalytic subunit tps2) (Trehalose-6-phosphate phosphatase) (TPP)
ruditapes_c20772	trehalose biosynthetic process	other metabolic processes	P	Trehalose-phosphatase (EC 3.1.3.12) (Trehalose synthase complex catalytic subunit tps2) (Trehalose-6-phosphate phosphatase) (TPP)
ruditapes_s37844	biological_process	other biological processes	P	Uncharacterized protein C4D7.07c
ruditapes_c12631	cell division	other biological processes	P	Polarized growth protein rax2 (Revert to axial protein 2)
ruditapes_c10306	cell morphogenesis during conjugation	cell organization and biogenesis	P	Polarized growth protein rax2 (Revert to axial protein 2)
ruditapes_c12631	cell cycle	cell cycle and proliferation	P	Polarized growth protein rax2 (Revert to axial protein 2)
ruditapes_c10306	cellular protein localization	other biological processes	P	Polarized growth protein rax2 (Revert to axial protein 2)
ruditapes_c10306	cell division	other biological processes	P	Polarized growth protein rax2 (Revert to axial protein 2)
ruditapes_c12631	cell morphogenesis during conjugation	cell organization and biogenesis	P	Polarized growth protein rax2 (Revert to axial protein 2)
ruditapes_c12631	cellular protein localization	other biological processes	P	Polarized growth protein rax2 (Revert to axial protein 2)
ruditapes_c10306	cell cycle	cell cycle and proliferation	P	Polarized growth protein rax2 (Revert to axial protein 2)
ruditapes_c25092	RNA processing	RNA metabolism	P	rRNA-processing protein fyv7
ruditapes_c25092	rRNA processing	RNA metabolism	P	rRNA-processing protein fyv7
ruditapes_c25092	ribosome biogenesis	other biological processes	P	rRNA-processing protein fyv7
ruditapes_c25092	maturation of SSU-rRNA	RNA metabolism	P	rRNA-processing protein fyv7
ruditapes_lrc25030	translation	protein metabolism	P	40S ribosomal protein S5-A
ruditapes_lrc25030	ribosome biogenesis	other biological processes	P	40S ribosomal protein S5-A
ruditapes_s38788	chromosome segregation	other biological processes	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_lrc35727	mitotic spindle organization	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes2_c3279	mitotic spindle organization	cell organization and biogenesis	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes2_c3279	cellular protein localization	other biological processes	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_s38788	cellular protein localization	other biological processes	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_s38788	cell cycle	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_lrc35727	chromosome segregation	other biological processes	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_s38788	cell division	other biological processes	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_s38788	mitotic spindle organization	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_s38788	mitotic spindle organization	cell organization and biogenesis	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes2_c3279	mitotic spindle organization	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_lrc35727	cell division	other biological processes	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes2_c3279	mitosis	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes2_c3279	mitosis	cell organization and biogenesis	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_lrc35727	cell cycle	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes2_c3279	chromosome segregation	other biological processes	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_lrc35727	mitosis	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_lrc35727	mitosis	cell organization and biogenesis	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_s38788	sister chromatid biorientation	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_s38788	sister chromatid biorientation	cell organization and biogenesis	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_s38788	mitosis	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_s38788	mitosis	cell organization and biogenesis	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_lrc35727	cellular protein localization	other biological processes	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes2_c3279	cell cycle	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_lrc35727	mitotic spindle organization	cell organization and biogenesis	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_lrc35727	sister chromatid biorientation	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_lrc35727	sister chromatid biorientation	cell organization and biogenesis	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes2_c3279	cell division	other biological processes	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes2_c3279	sister chromatid biorientation	cell cycle and proliferation	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes2_c3279	sister chromatid biorientation	cell organization and biogenesis	P	DASH complex subunit spc34 (Outer kinetochore protein spc34)
ruditapes_lrc27903	DNA repair	stress response	P	SWR1-complex protein 4
ruditapes_lrc27903	DNA repair	DNA metabolism	P	SWR1-complex protein 4
ruditapes_lrc27903	chromatin modification	cell organization and biogenesis	P	SWR1-complex protein 4
ruditapes_lrc27903	response to DNA damage stimulus	stress response	P	SWR1-complex protein 4
ruditapes_lrc27903	"regulation of transcription, DNA-dependent"	RNA metabolism	P	SWR1-complex protein 4
ruditapes_lrc27903	chromatin remodeling	cell organization and biogenesis	P	SWR1-complex protein 4
ruditapes_lrc27903	histone acetylation	protein metabolism	P	SWR1-complex protein 4
ruditapes_lrc27903	histone acetylation	cell organization and biogenesis	P	SWR1-complex protein 4
ruditapes_lrc27903	"transcription, DNA-dependent"	RNA metabolism	P	SWR1-complex protein 4
ruditapes2_c2317	transport	transport	P	Uncharacterized membrane protein C16E9.09c
ruditapes2_c2317	ER to Golgi vesicle-mediated transport	transport	P	Uncharacterized membrane protein C16E9.09c
ruditapes_c7536	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ksp1 (EC 2.7.11.1) (Serine/threonine-protein kinase ppk20)
ruditapes_c7536	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase ksp1 (EC 2.7.11.1) (Serine/threonine-protein kinase ppk20)
ruditapes2_lrc4494	translation	protein metabolism	P	60S ribosomal protein L1-A (L10a)
ruditapes_c14163	signal peptide processing	protein metabolism	P	Uncharacterized protein C13E7.11
ruditapes_c14163	protein import into mitochondrial intermembrane space	transport	P	Uncharacterized protein C13E7.11
ruditapes_c14163	protein import into mitochondrial intermembrane space	cell organization and biogenesis	P	Uncharacterized protein C13E7.11
ruditapes_c14163	proteolysis	protein metabolism	P	Uncharacterized protein C13E7.11
ruditapes_c14163	mitochondrion organization	cell organization and biogenesis	P	Uncharacterized protein C13E7.11
ruditapes_c23431	transport	transport	P	Gluconate transport inducer 1
ruditapes_c22281	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase CLA4 (EC 2.7.11.1)
ruditapes_c22281	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase CLA4 (EC 2.7.11.1)
ruditapes_c22281	pathogenesis	other biological processes	P	Serine/threonine-protein kinase CLA4 (EC 2.7.11.1)
ruditapes_c35552	cell adhesion	cell adhesion	P	Neurocan core protein (Chondroitin sulfate proteoglycan 3)
ruditapes_c35552	axon guidance	developmental processes	P	Neurocan core protein (Chondroitin sulfate proteoglycan 3)
ruditapes_c35552	axon guidance	cell organization and biogenesis	P	Neurocan core protein (Chondroitin sulfate proteoglycan 3)
ruditapes_c9084	oxidation reduction	other metabolic processes	P	Histone demethylase UTY (EC 1.14.11.-) (Ubiquitously-transcribed TPR protein on the Y chromosome) (Ubiquitously-transcribed Y chromosome tetratricopeptide repeat protein)
ruditapes_c9084	chromatin modification	cell organization and biogenesis	P	Histone demethylase UTY (EC 1.14.11.-) (Ubiquitously-transcribed TPR protein on the Y chromosome) (Ubiquitously-transcribed Y chromosome tetratricopeptide repeat protein)
ruditapes_c15194	vesicle-mediated transport	transport	P	AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adapter-related protein complex 3 subunit delta-1) (Delta-adaptin)
ruditapes_c15194	transport	transport	P	AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adapter-related protein complex 3 subunit delta-1) (Delta-adaptin)
ruditapes_c15194	eye pigment biosynthetic process	other metabolic processes	P	AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adapter-related protein complex 3 subunit delta-1) (Delta-adaptin)
ruditapes_c15194	antigen processing and presentation	other biological processes	P	AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adapter-related protein complex 3 subunit delta-1) (Delta-adaptin)
ruditapes_c15194	protein transport	transport	P	AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adapter-related protein complex 3 subunit delta-1) (Delta-adaptin)
ruditapes_c15194	positive regulation of NK T cell differentiation	developmental processes	P	AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adapter-related protein complex 3 subunit delta-1) (Delta-adaptin)
ruditapes_c15194	intracellular protein transport	transport	P	AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adapter-related protein complex 3 subunit delta-1) (Delta-adaptin)
ruditapes_c15194	synaptic vesicle membrane organization	cell organization and biogenesis	P	AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adapter-related protein complex 3 subunit delta-1) (Delta-adaptin)
ruditapes_c15194	"antigen processing and presentation, exogenous lipid antigen via MHC class Ib"	other biological processes	P	AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adapter-related protein complex 3 subunit delta-1) (Delta-adaptin)
ruditapes_c15194	protein localization in organelle	other biological processes	P	AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adapter-related protein complex 3 subunit delta-1) (Delta-adaptin)
ruditapes_c23655	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 171 (G-protein coupled receptor H963)
ruditapes_c23655	signal transduction	signal transduction	P	Probable G-protein coupled receptor 171 (G-protein coupled receptor H963)
ruditapes_c15347	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c15347	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c15347	androgen catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c15347	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c15347	androgen biosynthetic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c15347	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c31633	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation regulator 1 (TATA box-binding protein-associated factor 2S) (Transcription factor CA150)
ruditapes_c31633	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation regulator 1 (TATA box-binding protein-associated factor 2S) (Transcription factor CA150)
ruditapes_c31633	transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation regulator 1 (TATA box-binding protein-associated factor 2S) (Transcription factor CA150)
ruditapes2_c2388	transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation regulator 1 (TATA box-binding protein-associated factor 2S) (Transcription factor CA150)
ruditapes_c31633	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation regulator 1 (TATA box-binding protein-associated factor 2S) (Transcription factor CA150)
ruditapes2_c2388	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation regulator 1 (TATA box-binding protein-associated factor 2S) (Transcription factor CA150)
ruditapes2_c2388	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation regulator 1 (TATA box-binding protein-associated factor 2S) (Transcription factor CA150)
ruditapes2_c2388	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation regulator 1 (TATA box-binding protein-associated factor 2S) (Transcription factor CA150)
ruditapes_c14139	RNA elongation from RNA polymerase III promoter	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c14139	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c14139	termination of RNA polymerase III transcription	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c14139	termination of RNA polymerase III transcription	cell organization and biogenesis	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c19472	innate immune response	stress response	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c19472	positive regulation of interferon-beta production	other biological processes	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c14139	transcription from RNA polymerase III promoter	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c14139	positive regulation of interferon-beta production	other biological processes	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c19472	transcription from RNA polymerase III promoter	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c14139	gene expression	other metabolic processes	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c19472	gene expression	other metabolic processes	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c14139	innate immune response	stress response	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c19472	RNA elongation from RNA polymerase III promoter	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c14139	response to virus	other biological processes	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c19472	termination of RNA polymerase III transcription	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c19472	termination of RNA polymerase III transcription	cell organization and biogenesis	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c19472	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c19472	response to virus	other biological processes	P	DNA-directed RNA polymerase III subunit RPC1 (RNA polymerase III subunit C1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit) (DNA-directed RNA polymerase III subunit A) (RNA polymerase III 155 kDa subunit) (RPC155) (RNA polymerase III subunit C160)
ruditapes_c17137	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2)
ruditapes_c17137	negative regulation of cell proliferation	cell cycle and proliferation	P	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2)
ruditapes_c17137	apoptosis	death	P	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2)
ruditapes_c17137	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2)
ruditapes_c17137	positive regulation of apoptosis	death	P	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2)
ruditapes_c17137	"transcription, DNA-dependent"	RNA metabolism	P	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2)
ruditapes_c17137	transcription from RNA polymerase II promoter	RNA metabolism	P	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2)
ruditapes_c17137	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2)
ruditapes_c17137	regulation of transcription during S-phase of mitotic cell cycle	cell cycle and proliferation	P	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2)
ruditapes_c17137	regulation of transcription during S-phase of mitotic cell cycle	RNA metabolism	P	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2)
ruditapes_c16371	negative regulation of signal transduction	signal transduction	P	Regulator of G-protein signaling 12 (RGS12)
ruditapes_c16371	regulation of G-protein coupled receptor protein signaling pathway	signal transduction	P	Regulator of G-protein signaling 12 (RGS12)
ruditapes_c16371	signal transduction	signal transduction	P	Regulator of G-protein signaling 12 (RGS12)
ruditapes_c16371	positive regulation of GTPase activity	other biological processes	P	Regulator of G-protein signaling 12 (RGS12)
ruditapes_c16371	negative regulation of G-protein coupled receptor protein signaling pathway	signal transduction	P	Regulator of G-protein signaling 12 (RGS12)
ruditapes2_lrc5733	midbrain development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6934	pons development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34009	hippocampus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34009	midbrain development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35478	cerebellar Purkinje cell layer development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34165	subthalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34009	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc5733	cerebellar Purkinje cell layer development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34009	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34009	pyramidal neuron development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33656	hippocampus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34165	hippocampus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6934	subthalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35478	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34165	midbrain development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6934	hippocampus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc32840	hippocampus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35478	thalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc32840	subthalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34009	hypothalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6934	midbrain development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc32840	thalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc32840	pons development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6934	hypothalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35478	pons development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33656	subthalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34165	pyramidal neuron development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34009	cerebellar Purkinje cell layer development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35551	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc5733	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35551	subthalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34165	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34165	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc5733	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc5733	pyramidal neuron development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc32840	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33656	pons development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33236	cerebellar Purkinje cell layer development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35551	midbrain development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33656	midbrain development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34009	thalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35551	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35551	hippocampus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc5733	hypothalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34009	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33236	thalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35551	pyramidal neuron development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6934	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33236	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6934	pyramidal neuron development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34009	pons development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc32840	midbrain development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6934	thalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33236	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33236	pyramidal neuron development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6934	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33236	pons development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34165	hypothalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6934	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35478	subthalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33236	midbrain development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33236	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33656	cerebellar Purkinje cell layer development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35478	hippocampus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc32840	cerebellar Purkinje cell layer development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34165	cerebellar Purkinje cell layer development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35551	hypothalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35478	midbrain development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc5733	hippocampus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35478	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33236	hypothalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6934	cerebellar Purkinje cell layer development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35551	cerebellar Purkinje cell layer development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35478	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34165	thalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34165	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33656	thalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc5733	subthalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34009	subthalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35478	hypothalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35478	pyramidal neuron development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33656	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33656	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33236	subthalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33656	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35551	thalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc5733	pons development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc32840	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34165	pons development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc32840	pyramidal neuron development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc32840	hypothalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33656	pyramidal neuron development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc5733	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc5733	thalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc32840	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33656	hypothalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc33236	hippocampus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35551	pons development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc35551	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_c16788	biological_process	other biological processes	P	Down syndrome critical region protein 3 (Down syndrome critical region protein A)
ruditapes_c16788	vacuolar transport	transport	P	Down syndrome critical region protein 3 (Down syndrome critical region protein A)
ruditapes_lrc14637	myelination in the peripheral nervous system	developmental processes	P	Rho guanine nucleotide exchange factor 10
ruditapes_lrc14637	regulation of Rho protein signal transduction	signal transduction	P	Rho guanine nucleotide exchange factor 10
ruditapes_lrc14637	positive regulation of stress fiber formation	cell organization and biogenesis	P	Rho guanine nucleotide exchange factor 10
ruditapes_lrc14637	centrosome duplication	cell cycle and proliferation	P	Rho guanine nucleotide exchange factor 10
ruditapes_lrc14637	centrosome duplication	cell organization and biogenesis	P	Rho guanine nucleotide exchange factor 10
ruditapes_lrc14637	positive regulation of GTP catabolic process	other metabolic processes	P	Rho guanine nucleotide exchange factor 10
ruditapes2_c938	brain development	developmental processes	P	"Synaptojanin-2 (EC 3.1.3.36) (Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 2)"
ruditapes2_c938	phosphoinositide dephosphorylation	other metabolic processes	P	"Synaptojanin-2 (EC 3.1.3.36) (Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 2)"
ruditapes2_c938	intracellular distribution of mitochondria	cell organization and biogenesis	P	"Synaptojanin-2 (EC 3.1.3.36) (Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 2)"
ruditapes2_c938	inositol phosphate dephosphorylation	other metabolic processes	P	"Synaptojanin-2 (EC 3.1.3.36) (Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 2)"
ruditapes2_c938	phosphoinositide phosphorylation	other metabolic processes	P	"Synaptojanin-2 (EC 3.1.3.36) (Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 2)"
ruditapes_lrc39430	angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	response to mechanical stimulus	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	multicellular organismal development	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	multicellular organismal development	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	blood coagulation	stress response	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	negative regulation of blood vessel endothelial cell migration	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	Tie receptor signaling pathway	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	blood coagulation	stress response	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	leukocyte migration	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	blood vessel morphogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	positive regulation of angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	signal transduction	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	multicellular organismal development	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	cell differentiation	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	organ regeneration	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	positive regulation of angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	response to organic cyclic substance	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	response to glucose stimulus	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	blood vessel morphogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	maternal process involved in pregnancy	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	organ regeneration	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	response to radiation	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	germ cell development	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	positive regulation of angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	response to radiation	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	response to hypoxia	stress response	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	signal transduction	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	negative regulation of cell-substrate adhesion	cell adhesion	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	response to glucose stimulus	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	negative regulation of cell-substrate adhesion	cell adhesion	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	response to activity	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	response to mechanical stimulus	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	Tie receptor signaling pathway	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	germ cell development	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	negative regulation of blood vessel endothelial cell migration	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	cell differentiation	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	negative regulation of angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	negative regulation of positive chemotaxis	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	organ regeneration	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	response to organic cyclic substance	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	response to mechanical stimulus	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	response to hypoxia	stress response	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	negative regulation of angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	negative regulation of blood vessel endothelial cell migration	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	response to activity	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	blood coagulation	stress response	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	maternal process involved in pregnancy	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	response to organic cyclic substance	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	signal transduction	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	leukocyte migration	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	signal transduction	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	leukocyte migration	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	blood coagulation	stress response	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	Tie receptor signaling pathway	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	negative regulation of blood vessel endothelial cell migration	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	maternal process involved in pregnancy	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	negative regulation of positive chemotaxis	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	negative regulation of cell-substrate adhesion	cell adhesion	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	response to glucose stimulus	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	negative regulation of cell-substrate adhesion	cell adhesion	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	leukocyte migration	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	positive regulation of angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	germ cell development	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	response to radiation	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	response to glucose stimulus	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	blood vessel morphogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	organ regeneration	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	response to hypoxia	stress response	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	blood vessel morphogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	response to hypoxia	stress response	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	multicellular organismal development	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	maternal process involved in pregnancy	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	response to activity	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	response to activity	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	cell differentiation	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	cell differentiation	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	germ cell development	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	negative regulation of angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	response to mechanical stimulus	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	response to organic cyclic substance	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc39430	Tie receptor signaling pathway	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	negative regulation of positive chemotaxis	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_lrc32301	negative regulation of angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c4476	negative regulation of positive chemotaxis	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31076	response to radiation	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c13429	transport	transport	P	Importin subunit alpha-6 (Karyopherin subunit alpha-5)
ruditapes_c13429	cytokine-mediated signaling pathway	signal transduction	P	Importin subunit alpha-6 (Karyopherin subunit alpha-5)
ruditapes_c13429	protein import into nucleus	transport	P	Importin subunit alpha-6 (Karyopherin subunit alpha-5)
ruditapes_c13429	NLS-bearing substrate import into nucleus	transport	P	Importin subunit alpha-6 (Karyopherin subunit alpha-5)
ruditapes_c13429	protein transport	transport	P	Importin subunit alpha-6 (Karyopherin subunit alpha-5)
ruditapes_c2031	regulation of actin filament polymerization	protein metabolism	P	Actin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c2031	regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c2031	cell motion	other biological processes	P	Actin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c24468	termination of RNA polymerase I transcription	RNA metabolism	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c24468	termination of RNA polymerase I transcription	cell organization and biogenesis	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c24468	RNA elongation from RNA polymerase III promoter	RNA metabolism	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c24468	transcription from RNA polymerase III promoter	RNA metabolism	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c24468	RNA elongation from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c24468	termination of RNA polymerase III transcription	cell organization and biogenesis	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c24468	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c24468	transcription initiation from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c24468	transcription initiation from RNA polymerase I promoter	cell organization and biogenesis	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c24468	transcription from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c24468	gene expression	other metabolic processes	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c24468	termination of RNA polymerase III transcription	RNA metabolism	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40)
ruditapes_c11352	protein amino acid autophosphorylation	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	calcium ion homeostasis	other biological processes	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	negative regulation of cell proliferation	cell cycle and proliferation	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	regulation of protein stability	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	negative regulation of cell proliferation	cell cycle and proliferation	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	regulation of apoptosis	death	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	protein amino acid autophosphorylation	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	regulation of protein stability	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	protein amino acid phosphorylation	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	"transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	regulation of vitamin D receptor signaling pathway	signal transduction	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	protein ubiquitination	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	regulation of apoptosis	death	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	positive regulation of gene expression	other metabolic processes	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	protein amino acid phosphorylation	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	positive regulation of gene expression	other metabolic processes	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	regulation of protein stability	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	protein amino acid phosphorylation	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	protein ubiquitination	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	regulation of vitamin D receptor signaling pathway	signal transduction	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	protein ubiquitination	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	protein catabolic process	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	protein catabolic process	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	protein catabolic process	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	positive regulation of gene expression	other metabolic processes	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	"transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	regulation of apoptosis	death	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	protein amino acid autophosphorylation	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	regulation of vitamin D receptor signaling pathway	signal transduction	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	negative regulation of cell proliferation	cell cycle and proliferation	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	calcium ion homeostasis	other biological processes	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c17148	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c11352	"transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c31416	calcium ion homeostasis	other biological processes	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM24) (RING finger protein 82) (Tripartite motif-containing protein 24)
ruditapes_c27296	cell division	other biological processes	P	Centrin-3
ruditapes_c27296	cell cycle	cell cycle and proliferation	P	Centrin-3
ruditapes_c27296	mitosis	cell cycle and proliferation	P	Centrin-3
ruditapes_c27296	mitosis	cell organization and biogenesis	P	Centrin-3
ruditapes_c27296	centrosome cycle	cell cycle and proliferation	P	Centrin-3
ruditapes_c27296	centrosome cycle	cell organization and biogenesis	P	Centrin-3
ruditapes2_c3878	skeletal system development	developmental processes	P	Matrilin-3
ruditapes_c22017	sphingolipid metabolic process	other metabolic processes	P	Serine palmitoyltransferase 2 (EC 2.3.1.50) (Long chain base biosynthesis protein 2) (LCB 2) (Long chain base biosynthesis protein 2a) (LCB2a) (Serine-palmitoyl-CoA transferase 2) (SPT 2)
ruditapes_c22017	sphinganine biosynthetic process	other metabolic processes	P	Serine palmitoyltransferase 2 (EC 2.3.1.50) (Long chain base biosynthesis protein 2) (LCB 2) (Long chain base biosynthesis protein 2a) (LCB2a) (Serine-palmitoyl-CoA transferase 2) (SPT 2)
ruditapes_c22017	sphingolipid biosynthetic process	other metabolic processes	P	Serine palmitoyltransferase 2 (EC 2.3.1.50) (Long chain base biosynthesis protein 2) (LCB 2) (Long chain base biosynthesis protein 2a) (LCB2a) (Serine-palmitoyl-CoA transferase 2) (SPT 2)
ruditapes_c22017	biosynthetic process	other metabolic processes	P	Serine palmitoyltransferase 2 (EC 2.3.1.50) (Long chain base biosynthesis protein 2) (LCB 2) (Long chain base biosynthesis protein 2a) (LCB2a) (Serine-palmitoyl-CoA transferase 2) (SPT 2)
ruditapes_c22017	sphingosine biosynthetic process	other metabolic processes	P	Serine palmitoyltransferase 2 (EC 2.3.1.50) (Long chain base biosynthesis protein 2) (LCB 2) (Long chain base biosynthesis protein 2a) (LCB2a) (Serine-palmitoyl-CoA transferase 2) (SPT 2)
ruditapes_c22017	sphingomyelin biosynthetic process	other metabolic processes	P	Serine palmitoyltransferase 2 (EC 2.3.1.50) (Long chain base biosynthesis protein 2) (LCB 2) (Long chain base biosynthesis protein 2a) (LCB2a) (Serine-palmitoyl-CoA transferase 2) (SPT 2)
ruditapes_c22017	ceramide biosynthetic process	other metabolic processes	P	Serine palmitoyltransferase 2 (EC 2.3.1.50) (Long chain base biosynthesis protein 2) (LCB 2) (Long chain base biosynthesis protein 2a) (LCB2a) (Serine-palmitoyl-CoA transferase 2) (SPT 2)
ruditapes_c22017	metabolic process	other metabolic processes	P	Serine palmitoyltransferase 2 (EC 2.3.1.50) (Long chain base biosynthesis protein 2) (LCB 2) (Long chain base biosynthesis protein 2a) (LCB2a) (Serine-palmitoyl-CoA transferase 2) (SPT 2)
ruditapes_c16420	negative regulation of cell migration	other biological processes	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes_c16420	leukotriene biosynthetic process	other metabolic processes	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes_c16420	induction of apoptosis	death	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes_c16420	oxidation reduction	other metabolic processes	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes_c16420	leukotriene metabolic process	other metabolic processes	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes_c16420	regulation of epithelial cell differentiation	developmental processes	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes_c16420	fatty acid metabolic process	other metabolic processes	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes_c16420	negative regulation of cell cycle	cell cycle and proliferation	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes_c16420	lipid metabolic process	other metabolic processes	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes_c16420	negative regulation of cell proliferation	cell cycle and proliferation	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes_c16420	prostate gland development	developmental processes	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes_c16420	negative regulation of growth	other biological processes	P	Arachidonate 15-lipoxygenase B (15-LOX-B) (EC 1.13.11.33) (15-lipoxygenase 2) (15-LOX-2) (Arachidonate 15-lipoxygenase type II)
ruditapes2_c101	DNA recombination	DNA metabolism	P	High mobility group protein B3 (High mobility group protein 2a) (HMG-2a) (High mobility group protein 4) (HMG-4)
ruditapes2_c101	multicellular organismal development	developmental processes	P	High mobility group protein B3 (High mobility group protein 2a) (HMG-2a) (High mobility group protein 4) (HMG-4)
ruditapes_c13176	epidermis development	developmental processes	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	regulation of transcription factor activity	RNA metabolism	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	cell proliferation	cell cycle and proliferation	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	multicellular organismal development	developmental processes	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	transcription from RNA polymerase II promoter	RNA metabolism	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	organ morphogenesis	developmental processes	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	defense response	stress response	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	pattern specification process	developmental processes	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	"transcription, DNA-dependent"	RNA metabolism	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	keratinocyte differentiation	other biological processes	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	thymus development	developmental processes	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	embryonic development	developmental processes	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13176	epithelial cell proliferation	cell cycle and proliferation	P	Forkhead box protein N1 (Winged-helix transcription factor nude)
ruditapes_c13614	monocarboxylic acid transport	transport	P	Monocarboxylate transporter 5 (MCT 5) (Monocarboxylate transporter 4) (MCT 4) (Solute carrier family 16 member 4)
ruditapes_c13614	transport	transport	P	Monocarboxylate transporter 5 (MCT 5) (Monocarboxylate transporter 4) (MCT 4) (Solute carrier family 16 member 4)
ruditapes_c13614	transmembrane transport	transport	P	Monocarboxylate transporter 5 (MCT 5) (Monocarboxylate transporter 4) (MCT 4) (Solute carrier family 16 member 4)
ruditapes_lrc32292	proteolysis	protein metabolism	P	Transmembrane protease serine 2 (EC 3.4.21.-) (Serine protease 10) [Cleaved into: Transmembrane protease serine 2 non-catalytic chain; Transmembrane protease serine 2 catalytic chain]
ruditapes_c28401	leukocyte migration	other biological processes	P	Monocarboxylate transporter 4 (MCT 4) (Solute carrier family 16 member 3)
ruditapes_c28401	transport	transport	P	Monocarboxylate transporter 4 (MCT 4) (Solute carrier family 16 member 3)
ruditapes_c28401	pyruvate metabolic process	other metabolic processes	P	Monocarboxylate transporter 4 (MCT 4) (Solute carrier family 16 member 3)
ruditapes_c28401	transmembrane transport	transport	P	Monocarboxylate transporter 4 (MCT 4) (Solute carrier family 16 member 3)
ruditapes_c28401	monocarboxylic acid transport	transport	P	Monocarboxylate transporter 4 (MCT 4) (Solute carrier family 16 member 3)
ruditapes_c28401	organic anion transport	transport	P	Monocarboxylate transporter 4 (MCT 4) (Solute carrier family 16 member 3)
ruditapes_c28401	blood coagulation	stress response	P	Monocarboxylate transporter 4 (MCT 4) (Solute carrier family 16 member 3)
ruditapes_c9411	platelet degranulation	transport	P	Multidrug resistance-associated protein 4 (ATP-binding cassette sub-family C member 4) (MRP/cMOAT-related ABC transporter) (Multi-specific organic anion transporter B) (MOAT-B)
ruditapes_c9411	chloride transport	transport	P	Multidrug resistance-associated protein 4 (ATP-binding cassette sub-family C member 4) (MRP/cMOAT-related ABC transporter) (Multi-specific organic anion transporter B) (MOAT-B)
ruditapes_c9411	platelet activation	stress response	P	Multidrug resistance-associated protein 4 (ATP-binding cassette sub-family C member 4) (MRP/cMOAT-related ABC transporter) (Multi-specific organic anion transporter B) (MOAT-B)
ruditapes_c9411	ATP catabolic process	other metabolic processes	P	Multidrug resistance-associated protein 4 (ATP-binding cassette sub-family C member 4) (MRP/cMOAT-related ABC transporter) (Multi-specific organic anion transporter B) (MOAT-B)
ruditapes_c9411	transport	transport	P	Multidrug resistance-associated protein 4 (ATP-binding cassette sub-family C member 4) (MRP/cMOAT-related ABC transporter) (Multi-specific organic anion transporter B) (MOAT-B)
ruditapes_c9411	transmembrane transport	transport	P	Multidrug resistance-associated protein 4 (ATP-binding cassette sub-family C member 4) (MRP/cMOAT-related ABC transporter) (Multi-specific organic anion transporter B) (MOAT-B)
ruditapes_c9411	biological_process	other biological processes	P	Multidrug resistance-associated protein 4 (ATP-binding cassette sub-family C member 4) (MRP/cMOAT-related ABC transporter) (Multi-specific organic anion transporter B) (MOAT-B)
ruditapes_c9411	ion transport	transport	P	Multidrug resistance-associated protein 4 (ATP-binding cassette sub-family C member 4) (MRP/cMOAT-related ABC transporter) (Multi-specific organic anion transporter B) (MOAT-B)
ruditapes_c9411	blood coagulation	stress response	P	Multidrug resistance-associated protein 4 (ATP-binding cassette sub-family C member 4) (MRP/cMOAT-related ABC transporter) (Multi-specific organic anion transporter B) (MOAT-B)
ruditapes_c23642	biological_process	other biological processes	P	Next to BRCA1 gene 2 protein (Neighbor of BRCA1 gene 2 protein)
ruditapes2_lrc4285	regulation of G-protein coupled receptor protein signaling pathway	signal transduction	P	Regulator of G-protein signaling 16 (RGS16) (A28-RGS14P) (Retinal-specific RGS) (RGS-r) (hRGS-r) (Retinally abundant regulator of G-protein signaling)
ruditapes2_lrc4285	negative regulation of signal transduction	signal transduction	P	Regulator of G-protein signaling 16 (RGS16) (A28-RGS14P) (Retinal-specific RGS) (RGS-r) (hRGS-r) (Retinally abundant regulator of G-protein signaling)
ruditapes2_lrc4285	visual perception	other biological processes	P	Regulator of G-protein signaling 16 (RGS16) (A28-RGS14P) (Retinal-specific RGS) (RGS-r) (hRGS-r) (Retinally abundant regulator of G-protein signaling)
ruditapes2_lrc4285	positive regulation of GTPase activity	other biological processes	P	Regulator of G-protein signaling 16 (RGS16) (A28-RGS14P) (Retinal-specific RGS) (RGS-r) (hRGS-r) (Retinally abundant regulator of G-protein signaling)
ruditapes_c24904	oxidation reduction	other metabolic processes	P	Lysine-specific demethylase 6A (EC 1.14.11.-) (Histone demethylase UTX) (Ubiquitously-transcribed TPR protein on the X chromosome) (Ubiquitously-transcribed X chromosome tetratricopeptide repeat protein)
ruditapes_c8065	oxidation reduction	other metabolic processes	P	Lysine-specific demethylase 6A (EC 1.14.11.-) (Histone demethylase UTX) (Ubiquitously-transcribed TPR protein on the X chromosome) (Ubiquitously-transcribed X chromosome tetratricopeptide repeat protein)
ruditapes_c8065	chromatin modification	cell organization and biogenesis	P	Lysine-specific demethylase 6A (EC 1.14.11.-) (Histone demethylase UTX) (Ubiquitously-transcribed TPR protein on the X chromosome) (Ubiquitously-transcribed X chromosome tetratricopeptide repeat protein)
ruditapes_c24904	histone H3-K4 methylation	protein metabolism	P	Lysine-specific demethylase 6A (EC 1.14.11.-) (Histone demethylase UTX) (Ubiquitously-transcribed TPR protein on the X chromosome) (Ubiquitously-transcribed X chromosome tetratricopeptide repeat protein)
ruditapes_c24904	chromatin modification	cell organization and biogenesis	P	Lysine-specific demethylase 6A (EC 1.14.11.-) (Histone demethylase UTX) (Ubiquitously-transcribed TPR protein on the X chromosome) (Ubiquitously-transcribed X chromosome tetratricopeptide repeat protein)
ruditapes_c24904	histone H3-K4 methylation	cell organization and biogenesis	P	Lysine-specific demethylase 6A (EC 1.14.11.-) (Histone demethylase UTX) (Ubiquitously-transcribed TPR protein on the X chromosome) (Ubiquitously-transcribed X chromosome tetratricopeptide repeat protein)
ruditapes_c8065	histone H3-K4 methylation	protein metabolism	P	Lysine-specific demethylase 6A (EC 1.14.11.-) (Histone demethylase UTX) (Ubiquitously-transcribed TPR protein on the X chromosome) (Ubiquitously-transcribed X chromosome tetratricopeptide repeat protein)
ruditapes_c8065	histone H3-K4 methylation	cell organization and biogenesis	P	Lysine-specific demethylase 6A (EC 1.14.11.-) (Histone demethylase UTX) (Ubiquitously-transcribed TPR protein on the X chromosome) (Ubiquitously-transcribed X chromosome tetratricopeptide repeat protein)
ruditapes_c21206	translation	protein metabolism	P	60S ribosomal protein L8 (60S ribosomal protein L2) (Fragment)
ruditapes_c29850	translation	protein metabolism	P	60S ribosomal protein L10a (Fragment)
ruditapes_s38320	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Myb-like protein B (Transcription factor Myb2)
ruditapes_s38320	aggregation involved in sorocarp development	stress response	P	Myb-like protein B (Transcription factor Myb2)
ruditapes_s38320	aggregation involved in sorocarp development	developmental processes	P	Myb-like protein B (Transcription factor Myb2)
ruditapes_s38320	"transcription, DNA-dependent"	RNA metabolism	P	Myb-like protein B (Transcription factor Myb2)
ruditapes_s38320	multicellular organismal development	developmental processes	P	Myb-like protein B (Transcription factor Myb2)
ruditapes_c6986	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 2 (EC 2.7.11.1) (PfCDPK2)
ruditapes_c6986	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 2 (EC 2.7.11.1) (PfCDPK2)
ruditapes_c11479	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 2 (EC 2.7.11.1) (PfCDPK2)
ruditapes_c11479	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 2 (EC 2.7.11.1) (PfCDPK2)
ruditapes_c13441	axon extension involved in axon guidance	developmental processes	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	axon extension involved in axon guidance	cell organization and biogenesis	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	negative regulation of dendrite morphogenesis	developmental processes	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	negative regulation of dendrite morphogenesis	cell organization and biogenesis	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	retinal ganglion cell axon guidance	developmental processes	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	retinal ganglion cell axon guidance	cell organization and biogenesis	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	axon extension involved in development	cell organization and biogenesis	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	calcium-dependent cell-cell adhesion	cell adhesion	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	regulation of axon extension involved in axon guidance	developmental processes	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	regulation of axon extension involved in axon guidance	cell organization and biogenesis	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	cell adhesion	cell adhesion	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	axonal fasciculation	cell organization and biogenesis	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	ommatidial rotation	developmental processes	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	ommatidial rotation	cell organization and biogenesis	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	axon target recognition	developmental processes	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	axon target recognition	cell organization and biogenesis	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	axon extension involved in development	developmental processes	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	R7 cell development	developmental processes	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	R8 cell development	developmental processes	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	axon guidance	developmental processes	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	axon guidance	cell organization and biogenesis	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	homophilic cell adhesion	cell adhesion	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c13441	axonal fasciculation	developmental processes	P	Neural-cadherin (Cadherin-N) (dN-cadherin)
ruditapes_c6623	signal transduction	signal transduction	P	Guanine nucleotide-binding protein G(o) subunit alpha
ruditapes_c6623	G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein G(o) subunit alpha
ruditapes_lrc38232	phosphorylation	other metabolic processes	P	Arginine kinase (AK) (EC 2.7.3.3)
ruditapes_lrc35732	phosphorylation	other metabolic processes	P	Arginine kinase (AK) (EC 2.7.3.3)
ruditapes2_c3369	phosphorylation	other metabolic processes	P	Arginine kinase (AK) (EC 2.7.3.3)
ruditapes_lrc33633	phosphorylation	other metabolic processes	P	Arginine kinase (AK) (EC 2.7.3.3)
ruditapes_c829	phosphorylation	other metabolic processes	P	Arginine kinase (AK) (EC 2.7.3.3)
ruditapes_c21212	"transcription, DNA-dependent"	RNA metabolism	P	Polycomb protein esc (Protein extra sex combs)
ruditapes_c21212	multicellular organismal development	developmental processes	P	Polycomb protein esc (Protein extra sex combs)
ruditapes_c21212	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Polycomb protein esc (Protein extra sex combs)
ruditapes_c16221	oxidation reduction	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_c26344	lipid biosynthetic process	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_c16221	oxylipin biosynthetic process	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_c26344	oxidation reduction	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_c16221	fatty acid biosynthetic process	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_c26344	fatty acid biosynthetic process	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_c26344	oxylipin biosynthetic process	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_c26344	metabolic process	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_c16221	metabolic process	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_c16221	lipid biosynthetic process	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_c16221	leukotriene metabolic process	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_c26344	leukotriene metabolic process	other metabolic processes	P	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]
ruditapes_lrc34794	protein folding	protein metabolism	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes_lrc34794	response to stress	stress response	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes_lrc36088	protein folding	protein metabolism	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes_lrc32581	response to stress	stress response	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes2_c994	response to stress	stress response	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes_lrc39708	protein folding	protein metabolism	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes2_lrc3910	protein folding	protein metabolism	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes_lrc36088	response to stress	stress response	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes_lrc32581	protein folding	protein metabolism	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes2_c994	protein folding	protein metabolism	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes_c846	protein folding	protein metabolism	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes2_lrc3910	response to stress	stress response	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes_c846	response to stress	stress response	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes_lrc39708	response to stress	stress response	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes2_c861	biological_process	other biological processes	P	Glutathione S-transferase 3 (EC 2.5.1.18) (CeGST3) (GST class-sigma)
ruditapes_s36359	biological_process	other biological processes	P	Glutathione S-transferase 3 (EC 2.5.1.18) (CeGST3) (GST class-sigma)
ruditapes_c2625	biological_process	other biological processes	P	Glutathione S-transferase 3 (EC 2.5.1.18) (CeGST3) (GST class-sigma)
ruditapes_c24767	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear hormone receptor family member nhr-57
ruditapes_c24767	steroid hormone mediated signaling	signal transduction	P	Nuclear hormone receptor family member nhr-57
ruditapes_c24767	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear hormone receptor family member nhr-57
ruditapes_c21733	lysosome organization	cell organization and biogenesis	P	Putative glucosylceramidase 2 (EC 3.2.1.45)
ruditapes_c21733	sphingolipid metabolic process	other metabolic processes	P	Putative glucosylceramidase 2 (EC 3.2.1.45)
ruditapes_c21733	carbohydrate metabolic process	other metabolic processes	P	Putative glucosylceramidase 2 (EC 3.2.1.45)
ruditapes_c5547	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L3
ruditapes_c5547	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L3
ruditapes_c3869	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L3
ruditapes_c3869	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L3
ruditapes_c5547	translation	protein metabolism	P	60S ribosomal protein L3
ruditapes2_c160	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L3
ruditapes2_c160	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L3
ruditapes_c3869	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L3
ruditapes_c3869	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L3
ruditapes_c3869	translation	protein metabolism	P	60S ribosomal protein L3
ruditapes_c5547	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L3
ruditapes_c5547	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L3
ruditapes2_c160	translation	protein metabolism	P	60S ribosomal protein L3
ruditapes2_c160	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L3
ruditapes2_c160	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L3
ruditapes_c20802	lipid biosynthetic process	other metabolic processes	P	Putative steroid dehydrogenase 4 (EC 1.1.1.-)
ruditapes_c20802	metabolic process	other metabolic processes	P	Putative steroid dehydrogenase 4 (EC 1.1.1.-)
ruditapes_c20802	steroid biosynthetic process	other metabolic processes	P	Putative steroid dehydrogenase 4 (EC 1.1.1.-)
ruditapes_c20802	oxidation reduction	other metabolic processes	P	Putative steroid dehydrogenase 4 (EC 1.1.1.-)
ruditapes_c20956	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear hormone receptor family member nhr-106
ruditapes_c20956	steroid hormone mediated signaling	signal transduction	P	Nuclear hormone receptor family member nhr-106
ruditapes_c20956	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear hormone receptor family member nhr-106
ruditapes_c23273	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein HIRA homolog (Protein sesame) (dHIRA)
ruditapes_c23273	sperm chromatin decondensation	cell organization and biogenesis	P	Protein HIRA homolog (Protein sesame) (dHIRA)
ruditapes_c23273	chromatin remodeling	cell organization and biogenesis	P	Protein HIRA homolog (Protein sesame) (dHIRA)
ruditapes_c23273	"fertilization, exchange of chromosomal proteins"	cell organization and biogenesis	P	Protein HIRA homolog (Protein sesame) (dHIRA)
ruditapes_c23273	chromatin modification	cell organization and biogenesis	P	Protein HIRA homolog (Protein sesame) (dHIRA)
ruditapes_c23273	DNA replication-independent nucleosome assembly	cell organization and biogenesis	P	Protein HIRA homolog (Protein sesame) (dHIRA)
ruditapes_c23273	"transcription, DNA-dependent"	RNA metabolism	P	Protein HIRA homolog (Protein sesame) (dHIRA)
ruditapes_c23525	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Suppressor of presenilin protein 4
ruditapes_c23525	"transcription, DNA-dependent"	RNA metabolism	P	Suppressor of presenilin protein 4
ruditapes_c17170	oxidation reduction	other metabolic processes	P	Putative cytochrome P450 cyp-13B1 (EC 1.14.-.-)
ruditapes_s39521	defense response to Gram-negative bacterium	stress response	P	Major royal jelly protein 1 (MRJP-1) (56-kDa protein 4) (p56kP-4) (Bee-milk protein) (Royalactin) [Cleaved into: Jellein-1 (Jelleine-I); Jellein-2 (Jelleine-II); Jellein-4 (Jelleine-IV)]
ruditapes_s39521	killing of cells of another organism	other biological processes	P	Major royal jelly protein 1 (MRJP-1) (56-kDa protein 4) (p56kP-4) (Bee-milk protein) (Royalactin) [Cleaved into: Jellein-1 (Jelleine-I); Jellein-2 (Jelleine-II); Jellein-4 (Jelleine-IV)]
ruditapes_s39521	defense response to fungus	stress response	P	Major royal jelly protein 1 (MRJP-1) (56-kDa protein 4) (p56kP-4) (Bee-milk protein) (Royalactin) [Cleaved into: Jellein-1 (Jelleine-I); Jellein-2 (Jelleine-II); Jellein-4 (Jelleine-IV)]
ruditapes_s39521	"caste determination, influence by environmental factors"	developmental processes	P	Major royal jelly protein 1 (MRJP-1) (56-kDa protein 4) (p56kP-4) (Bee-milk protein) (Royalactin) [Cleaved into: Jellein-1 (Jelleine-I); Jellein-2 (Jelleine-II); Jellein-4 (Jelleine-IV)]
ruditapes_s39521	defense response to Gram-positive bacterium	stress response	P	Major royal jelly protein 1 (MRJP-1) (56-kDa protein 4) (p56kP-4) (Bee-milk protein) (Royalactin) [Cleaved into: Jellein-1 (Jelleine-I); Jellein-2 (Jelleine-II); Jellein-4 (Jelleine-IV)]
ruditapes_s39521	multicellular organismal development	developmental processes	P	Major royal jelly protein 1 (MRJP-1) (56-kDa protein 4) (p56kP-4) (Bee-milk protein) (Royalactin) [Cleaved into: Jellein-1 (Jelleine-I); Jellein-2 (Jelleine-II); Jellein-4 (Jelleine-IV)]
ruditapes_s39521	defense response to bacterium	stress response	P	Major royal jelly protein 1 (MRJP-1) (56-kDa protein 4) (p56kP-4) (Bee-milk protein) (Royalactin) [Cleaved into: Jellein-1 (Jelleine-I); Jellein-2 (Jelleine-II); Jellein-4 (Jelleine-IV)]
ruditapes2_c3605	glutamine metabolic process	other metabolic processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c3605	cell cycle	cell cycle and proliferation	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c4408	mitochondrion organization	cell organization and biogenesis	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c3605	mitochondrion organization	cell organization and biogenesis	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c3605	imaginal disc development	developmental processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c4408	glutamine metabolic process	other metabolic processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c3605	positive regulation of cell proliferation	cell cycle and proliferation	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c3605	phosphorylation	other metabolic processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c4408	multicellular organismal development	developmental processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c3605	multicellular organismal development	developmental processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c4408	positive regulation of cell proliferation	cell cycle and proliferation	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c4408	cell proliferation	cell cycle and proliferation	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c4408	cell cycle	cell cycle and proliferation	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c4408	imaginal disc development	developmental processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c3605	selenocysteine biosynthetic process	other metabolic processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c4408	selenocysteine biosynthetic process	other metabolic processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c4408	phosphorylation	other metabolic processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes2_c3605	cell proliferation	cell cycle and proliferation	P	"Selenide, water dikinase (EC 2.7.9.3) (Protein patufet) (Selenium donor protein) (Selenophosphate synthase) (dSelD)"
ruditapes_c7226	ecdysone metabolic process	other metabolic processes	P	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxy-2-methylbutyryl-CoA dehydrogenase) (EC 1.1.1.178) (3-hydroxyacyl-CoA dehydrogenase type II) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Scully protein) (Type II HADH)
ruditapes_c7226	ecdysone metabolic process	developmental processes	P	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxy-2-methylbutyryl-CoA dehydrogenase) (EC 1.1.1.178) (3-hydroxyacyl-CoA dehydrogenase type II) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Scully protein) (Type II HADH)
ruditapes_c7226	metabolic process	other metabolic processes	P	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxy-2-methylbutyryl-CoA dehydrogenase) (EC 1.1.1.178) (3-hydroxyacyl-CoA dehydrogenase type II) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Scully protein) (Type II HADH)
ruditapes_c7226	tRNA processing	RNA metabolism	P	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxy-2-methylbutyryl-CoA dehydrogenase) (EC 1.1.1.178) (3-hydroxyacyl-CoA dehydrogenase type II) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Scully protein) (Type II HADH)
ruditapes_c7226	oxidation reduction	other metabolic processes	P	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxy-2-methylbutyryl-CoA dehydrogenase) (EC 1.1.1.178) (3-hydroxyacyl-CoA dehydrogenase type II) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Scully protein) (Type II HADH)
ruditapes_c7226	acyl-CoA metabolic process	other metabolic processes	P	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxy-2-methylbutyryl-CoA dehydrogenase) (EC 1.1.1.178) (3-hydroxyacyl-CoA dehydrogenase type II) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Scully protein) (Type II HADH)
ruditapes_c7226	steroid metabolic process	other metabolic processes	P	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxy-2-methylbutyryl-CoA dehydrogenase) (EC 1.1.1.178) (3-hydroxyacyl-CoA dehydrogenase type II) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Scully protein) (Type II HADH)
ruditapes_c7226	androgen metabolic process	other metabolic processes	P	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxy-2-methylbutyryl-CoA dehydrogenase) (EC 1.1.1.178) (3-hydroxyacyl-CoA dehydrogenase type II) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Scully protein) (Type II HADH)
ruditapes_c7226	fatty acid metabolic process	other metabolic processes	P	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxy-2-methylbutyryl-CoA dehydrogenase) (EC 1.1.1.178) (3-hydroxyacyl-CoA dehydrogenase type II) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Scully protein) (Type II HADH)
ruditapes_c7226	estrogen metabolic process	other metabolic processes	P	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxy-2-methylbutyryl-CoA dehydrogenase) (EC 1.1.1.178) (3-hydroxyacyl-CoA dehydrogenase type II) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Scully protein) (Type II HADH)
ruditapes_c7302	glycolysis	other metabolic processes	P	Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (E3)
ruditapes_c7302	oxidation reduction	other metabolic processes	P	Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (E3)
ruditapes_c7302	cell redox homeostasis	other biological processes	P	Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (E3)
ruditapes_s40353	fibrinolysis	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_s40353	proteolysis	protein metabolism	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_s40353	tissue remodeling	other biological processes	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_s40353	blood coagulation	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c33874	cell redox homeostasis	other biological processes	P	Thioredoxin domain-containing protein 9 (Protein 1-4)
ruditapes2_c143	cell redox homeostasis	other biological processes	P	Thioredoxin domain-containing protein 9 (Protein 1-4)
ruditapes_c34325	cell redox homeostasis	other biological processes	P	Thioredoxin domain-containing protein 9 (Protein 1-4)
ruditapes2_c380	oxidation reduction	other metabolic processes	P	Epididymal secretory glutathione peroxidase (EC 1.11.1.9) (Epididymis-specific glutathione peroxidase-like protein) (EGLP) (Glutathione peroxidase 5) (GPx-5) (GSHPx-5)
ruditapes_c1355	oxidation reduction	other metabolic processes	P	Epididymal secretory glutathione peroxidase (EC 1.11.1.9) (Epididymis-specific glutathione peroxidase-like protein) (EGLP) (Glutathione peroxidase 5) (GPx-5) (GSHPx-5)
ruditapes_c1355	response to oxidative stress	stress response	P	Epididymal secretory glutathione peroxidase (EC 1.11.1.9) (Epididymis-specific glutathione peroxidase-like protein) (EGLP) (Glutathione peroxidase 5) (GPx-5) (GSHPx-5)
ruditapes2_c380	response to oxidative stress	stress response	P	Epididymal secretory glutathione peroxidase (EC 1.11.1.9) (Epididymis-specific glutathione peroxidase-like protein) (EGLP) (Glutathione peroxidase 5) (GPx-5) (GSHPx-5)
ruditapes2_lrc7420	negative regulation of peptidase activity	other biological processes	P	Cystatin-C (Cystatin-3)
ruditapes2_lrc7420	negative regulation of blood vessel remodeling	developmental processes	P	Cystatin-C (Cystatin-3)
ruditapes2_lrc7420	negative regulation of elastin catabolic process	protein metabolism	P	Cystatin-C (Cystatin-3)
ruditapes2_lrc7420	regulation of tissue remodeling	other biological processes	P	Cystatin-C (Cystatin-3)
ruditapes2_lrc7420	negative regulation of collagen catabolic process	other metabolic processes	P	Cystatin-C (Cystatin-3)
ruditapes2_lrc7420	negative regulation of extracellular matrix disassembly	cell organization and biogenesis	P	Cystatin-C (Cystatin-3)
ruditapes2_lrc7420	defense response	stress response	P	Cystatin-C (Cystatin-3)
ruditapes2_lrc7420	fibril organization	cell organization and biogenesis	P	Cystatin-C (Cystatin-3)
ruditapes_c93	regulation of cell growth	other biological processes	P	Connective tissue growth factor (CCN family member 2)
ruditapes_c93	DNA replication	DNA metabolism	P	Connective tissue growth factor (CCN family member 2)
ruditapes_c93	cell adhesion	cell adhesion	P	Connective tissue growth factor (CCN family member 2)
ruditapes_c24315	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Major histocompatibility complex class I-related gene protein (MHC class I-related gene protein)
ruditapes_c24315	antigen processing and presentation	other biological processes	P	Major histocompatibility complex class I-related gene protein (MHC class I-related gene protein)
ruditapes_c24315	immune response	other biological processes	P	Major histocompatibility complex class I-related gene protein (MHC class I-related gene protein)
ruditapes_c12054	cellular amino acid biosynthetic process	other metabolic processes	P	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_c12054	nitrogen compound metabolic process	other metabolic processes	P	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_c12054	glutamate biosynthetic process	other metabolic processes	P	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_c12054	metabolic process	other metabolic processes	P	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_c12054	oxidation reduction	other metabolic processes	P	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_c12054	glutamine metabolic process	other metabolic processes	P	Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_c17217	translation	protein metabolism	P	"30S ribosomal protein S4, chloroplastic (Fragment)"
ruditapes_c20078	oxidation reduction	other metabolic processes	P	Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) (EC 4.1.1.39)
ruditapes_c20078	photorespiration	other metabolic processes	P	Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) (EC 4.1.1.39)
ruditapes_c20078	photosynthesis	other metabolic processes	P	Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) (EC 4.1.1.39)
ruditapes_c20078	reductive pentose-phosphate cycle	other metabolic processes	P	Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) (EC 4.1.1.39)
ruditapes_c20078	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) (EC 4.1.1.39)
ruditapes_c15225	ribosome biogenesis	other biological processes	P	Probable ribosome biogenesis protein RLP24
ruditapes_c15225	translation	protein metabolism	P	Probable ribosome biogenesis protein RLP24
ruditapes2_c4176	protein ubiquitination	protein metabolism	P	U-box domain-containing protein 4 (EC 6.3.2.-) (Plant U-box protein 4)
ruditapes_lrc15303	transport	transport	P	Acyl-CoA-binding protein (ACBP)
ruditapes_c30582	defense response	stress response	P	Probable disease resistance protein At1g61190
ruditapes2_c1143	defense response	stress response	P	Probable disease resistance protein At1g61190
ruditapes2_c1608	biological_process	other biological processes	P	Calmodulin-like protein 5 (Protein MULTICOPY SUPPRESSORS OF SNF4 DEFICIENCY IN YEAST 3)
ruditapes2_c1365	translation	protein metabolism	P	60S ribosomal protein L38
ruditapes_c8561	transport	transport	P	Potassium transporter 2 (AtKT2) (AtKUP2) (AtPOT2)
ruditapes_c8561	potassium ion transport	transport	P	Potassium transporter 2 (AtKT2) (AtKUP2) (AtPOT2)
ruditapes_c8561	ion transport	transport	P	Potassium transporter 2 (AtKT2) (AtKUP2) (AtPOT2)
ruditapes_c20920	galactose metabolic process	other metabolic processes	P	Galactinol synthase 1 (AtGolS1) (GolS-1) (EC 2.4.1.123)
ruditapes_c20920	response to oxidative stress	stress response	P	Galactinol synthase 1 (AtGolS1) (GolS-1) (EC 2.4.1.123)
ruditapes_c20920	response to hydrogen peroxide	stress response	P	Galactinol synthase 1 (AtGolS1) (GolS-1) (EC 2.4.1.123)
ruditapes_c20920	response to high light intensity	other biological processes	P	Galactinol synthase 1 (AtGolS1) (GolS-1) (EC 2.4.1.123)
ruditapes_c20920	response to cold	stress response	P	Galactinol synthase 1 (AtGolS1) (GolS-1) (EC 2.4.1.123)
ruditapes_c20920	response to salt stress	stress response	P	Galactinol synthase 1 (AtGolS1) (GolS-1) (EC 2.4.1.123)
ruditapes_c20920	response to heat	stress response	P	Galactinol synthase 1 (AtGolS1) (GolS-1) (EC 2.4.1.123)
ruditapes_c31624	meiosis	cell cycle and proliferation	P	Protein PRD1 (AtPRD1) (Protein PUTATIVE RECOMBINATION INITIATION DEFECT 1)
ruditapes_c31624	chiasma formation	cell cycle and proliferation	P	Protein PRD1 (AtPRD1) (Protein PUTATIVE RECOMBINATION INITIATION DEFECT 1)
ruditapes_c31624	chiasma formation	cell organization and biogenesis	P	Protein PRD1 (AtPRD1) (Protein PUTATIVE RECOMBINATION INITIATION DEFECT 1)
ruditapes_c31624	meiotic DNA double-strand break formation	cell cycle and proliferation	P	Protein PRD1 (AtPRD1) (Protein PUTATIVE RECOMBINATION INITIATION DEFECT 1)
ruditapes_c31624	meiotic DNA double-strand break formation	DNA metabolism	P	Protein PRD1 (AtPRD1) (Protein PUTATIVE RECOMBINATION INITIATION DEFECT 1)
ruditapes_c1657	calcium-mediated signaling	signal transduction	P	Calmodulin-like protein 8 (AtCaM-8)
ruditapes2_c3203	calcium-mediated signaling	signal transduction	P	Calmodulin-like protein 8 (AtCaM-8)
ruditapes_c1920	calcium-mediated signaling	signal transduction	P	Calmodulin-like protein 8 (AtCaM-8)
ruditapes_s39122	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase-like protein B6 (AtCslB6) (EC 2.4.1.-)
ruditapes_s39122	cell wall organization	cell organization and biogenesis	P	Cellulose synthase-like protein B6 (AtCslB6) (EC 2.4.1.-)
ruditapes2_lrc5260	lipid catabolic process	other metabolic processes	P	"Phospholipase A1-Ibeta2, chloroplastic (EC 3.1.1.-)"
ruditapes2_lrc5260	lipid metabolic process	other metabolic processes	P	"Phospholipase A1-Ibeta2, chloroplastic (EC 3.1.1.-)"
ruditapes_c2598	proton transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (Vacuolar proton pump subunit E)
ruditapes_c2598	ion transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (Vacuolar proton pump subunit E)
ruditapes_c2598	transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (Vacuolar proton pump subunit E)
ruditapes_c2598	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (Vacuolar proton pump subunit E)
ruditapes_lrc25316	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes_lrc25316	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes_lrc25316	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes_c28306	negative regulation of peptidase activity	other biological processes	P	Cysteine protease inhibitor 8 (PCPI-8) (Pcpi8) (Fragment)
ruditapes_c28306	negative regulation of endopeptidase activity	other biological processes	P	Cysteine protease inhibitor 8 (PCPI-8) (Pcpi8) (Fragment)
ruditapes_c19203	polyamine biosynthetic process	other metabolic processes	P	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]
ruditapes_c19203	spermine biosynthetic process	other metabolic processes	P	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]
ruditapes_c19203	spermidine biosynthetic process	other metabolic processes	P	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]
ruditapes_c11626	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Probable dihydroorotase-like protein (Aspartate carbamoyltransferase 42 kDa non-catalytic chain)
ruditapes_lrc23418	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_lrc23418	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c11021	metabolic process	other metabolic processes	P	"UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase (EC 2.6.1.92) (Pseudaminic acid biosynthesis protein C)"
ruditapes_c20226	methylation	other metabolic processes	P	tRNA (cmo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c20226	tRNA processing	RNA metabolism	P	tRNA (cmo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c20226	tRNA wobble uridine modification	RNA metabolism	P	tRNA (cmo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c12152	lysine biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_c12152	cellular amino acid biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_c12152	diaminopimelate biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_c29391	transport	transport	P	Probable sugar efflux transporter
ruditapes_c29391	carbohydrate transport	transport	P	Probable sugar efflux transporter
ruditapes_c29391	transmembrane transport	transport	P	Probable sugar efflux transporter
ruditapes2_c2899	purine base biosynthetic process	other metabolic processes	P	Putative glutamine amidotransferase MTH
ruditapes2_c2899	glutamine metabolic process	other metabolic processes	P	Putative glutamine amidotransferase MTH
ruditapes_c27702	cobalamin biosynthetic process	other metabolic processes	P	Putative cobalt-precorrin-6A synthase [deacetylating] (EC 2.1.1.-)
ruditapes_c28050	transport	transport	P	Uncharacterized transporter MTH
ruditapes_c15054	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c15054	carbamoyl phosphate biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c15054	cellular amino acid biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c15054	arginine biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c15054	glutamine metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c15054	glutamine catabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c7954	oxidation reduction	other metabolic processes	P	2-oxoglutarate synthase subunit KorB (EC 1.2.7.3) (2-ketoglutarate oxidoreductase beta chain) (KOR) (2-oxoglutarate-ferredoxin oxidoreductase subunit beta)
ruditapes_c11420	metabolic process	other metabolic processes	P	DNA polymerase II small subunit (Pol II) (EC 2.7.7.7)
ruditapes_c11420	DNA replication	DNA metabolism	P	DNA polymerase II small subunit (Pol II) (EC 2.7.7.7)
ruditapes_c6562	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 (BPG-independent PGAM 1) (Phosphoglyceromutase 1) (aPGAM 1) (EC 5.4.2.1)"
ruditapes_c6562	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 (BPG-independent PGAM 1) (Phosphoglyceromutase 1) (aPGAM 1) (EC 5.4.2.1)"
ruditapes_c12224	translation	protein metabolism	P	30S ribosomal protein S3Ae
ruditapes_c27598	histidine biosynthetic process	other metabolic processes	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c27598	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c27598	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c27598	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c27598	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c27598	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_s38798	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Ribulose bisphosphate carboxylase (RuBisCO) (EC 4.1.1.39)
ruditapes_s38798	oxidation reduction	other metabolic processes	P	Ribulose bisphosphate carboxylase (RuBisCO) (EC 4.1.1.39)
ruditapes2_c1600	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c1600	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c8214	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c8214	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c1600	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c8214	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c1600	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c1600	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c8214	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c8214	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c2313	oxidation reduction	other metabolic processes	P	Acetyl-CoA decarbonylase/synthase complex subunit alpha 1 (ACDS complex subunit alpha 1) (EC 1.2.99.2) (ACDS complex carbon monoxide dehydrogenase 1) (ACDS CODH 1)
ruditapes_c2313	acetyl-CoA metabolic process	other metabolic processes	P	Acetyl-CoA decarbonylase/synthase complex subunit alpha 1 (ACDS complex subunit alpha 1) (EC 1.2.99.2) (ACDS complex carbon monoxide dehydrogenase 1) (ACDS CODH 1)
ruditapes_lrc34282	aspartyl-tRNA aminoacylation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc34282	aspartyl-tRNA aminoacylation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc34282	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc34282	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_lrc34282	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c17852	phosphorylation	other metabolic processes	P	"Probable phosphoenolpyruvate synthase (PEP synthase) (EC 2.7.9.2) (Pyruvate, water dikinase)"
ruditapes_c20600	tricarboxylic acid cycle	other metabolic processes	P	Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)
ruditapes_c20600	glyoxylate cycle	other metabolic processes	P	Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)
ruditapes_c20600	oxidation reduction	other metabolic processes	P	Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)
ruditapes_c15707	tRNA modification	RNA metabolism	P	tRNA-guanine(15) transglycosylase (EC 2.4.2.48) (7-cyano-7-deazaguanine tRNA-ribosyltransferase) (Archaeal tRNA-guanine transglycosylase)
ruditapes_c15707	queuosine biosynthetic process	RNA metabolism	P	tRNA-guanine(15) transglycosylase (EC 2.4.2.48) (7-cyano-7-deazaguanine tRNA-ribosyltransferase) (Archaeal tRNA-guanine transglycosylase)
ruditapes_c15707	tRNA processing	RNA metabolism	P	tRNA-guanine(15) transglycosylase (EC 2.4.2.48) (7-cyano-7-deazaguanine tRNA-ribosyltransferase) (Archaeal tRNA-guanine transglycosylase)
ruditapes_c24267	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c24267	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c12360	oxidation reduction	other metabolic processes	P	2-oxoglutarate synthase subunit KorB (EC 1.2.7.3) (2-ketoglutarate oxidoreductase beta chain) (KOR) (2-oxoglutarate-ferredoxin oxidoreductase subunit beta)
ruditapes_c4055	protein catabolic process	protein metabolism	P	Archaeal Lon protease (EC 3.4.21.-) (ATP-dependent protease La homolog)
ruditapes_c4055	photosynthesis	other metabolic processes	P	Archaeal Lon protease (EC 3.4.21.-) (ATP-dependent protease La homolog)
ruditapes_c4055	chlorophyll biosynthetic process	other metabolic processes	P	Archaeal Lon protease (EC 3.4.21.-) (ATP-dependent protease La homolog)
ruditapes_c4055	proteolysis	protein metabolism	P	Archaeal Lon protease (EC 3.4.21.-) (ATP-dependent protease La homolog)
ruditapes_c4055	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Archaeal Lon protease (EC 3.4.21.-) (ATP-dependent protease La homolog)
ruditapes_c22585	phosphorylation	other metabolic processes	P	Uncharacterized sugar kinase AF
ruditapes_c23928	ATP catabolic process	other metabolic processes	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23928	response to DNA damage stimulus	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23928	nucleotide-excision repair	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23928	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23928	SOS response	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23928	DNA repair	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23928	DNA repair	DNA metabolism	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c20304	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase YbdM (EC 2.7.11.1)
ruditapes_c20304	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase YbdM (EC 2.7.11.1)
ruditapes_c6804	establishment of competence for transformation	other biological processes	P	Putative competence protein CoiA
ruditapes_c17557	oxidation reduction	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c17557	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c17138	transmembrane transport	transport	P	Bacillibactin exporter
ruditapes_c17138	transport	transport	P	Bacillibactin exporter
ruditapes_c11781	biosynthetic process	other metabolic processes	P	Polyketide synthase PksN (EC 2.3.1.-)
ruditapes_s38111	biosynthetic process	other metabolic processes	P	Polyketide synthase PksN (EC 2.3.1.-)
ruditapes_c11781	metabolic process	other metabolic processes	P	Polyketide synthase PksN (EC 2.3.1.-)
ruditapes_s38111	metabolic process	other metabolic processes	P	Polyketide synthase PksN (EC 2.3.1.-)
ruditapes2_c694	DNA recombination	DNA metabolism	P	SPBc2 prophage-derived recombinase-like protein YomM
ruditapes2_c694	DNA integration	DNA metabolism	P	SPBc2 prophage-derived recombinase-like protein YomM
ruditapes_c6214	cell wall organization	cell organization and biogenesis	P	Putative N-acetylmuramoyl-L-alanine amidase YrvJ (EC 3.5.1.28)
ruditapes_c6214	peptidoglycan catabolic process	other metabolic processes	P	Putative N-acetylmuramoyl-L-alanine amidase YrvJ (EC 3.5.1.28)
ruditapes_c37221	cell wall organization	cell organization and biogenesis	P	Putative N-acetylmuramoyl-L-alanine amidase YrvJ (EC 3.5.1.28)
ruditapes_c37221	peptidoglycan catabolic process	other metabolic processes	P	Putative N-acetylmuramoyl-L-alanine amidase YrvJ (EC 3.5.1.28)
ruditapes2_c4751	peptidoglycan catabolic process	other metabolic processes	P	Putative N-acetylmuramoyl-L-alanine amidase YrvJ (EC 3.5.1.28)
ruditapes2_c4751	cell wall organization	cell organization and biogenesis	P	Putative N-acetylmuramoyl-L-alanine amidase YrvJ (EC 3.5.1.28)
ruditapes_c20589	transport	transport	P	Uncharacterized MFS-type transporter YubD
ruditapes_c20589	transmembrane transport	transport	P	Uncharacterized MFS-type transporter YubD
ruditapes_lrc37132	metabolic process	other metabolic processes	P	Uncharacterized hydrolase YutF (EC 3.-.-.-)
ruditapes2_c2487	sporulation resulting in formation of a cellular spore	other biological processes	P	Sporulation protein YunB
ruditapes_s38530	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YvzC
ruditapes_s38530	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YvzC
ruditapes_c18084	proteolysis	protein metabolism	P	Serine protease EspP (EC 3.4.21.-) [Cleaved into: Secreted autotransporter protein EspP (Extracellular serine protease plasmid-encoded EspP); Autotransporter protein EspP translocator]
ruditapes_c18084	pathogenesis	other biological processes	P	Serine protease EspP (EC 3.4.21.-) [Cleaved into: Secreted autotransporter protein EspP (Extracellular serine protease plasmid-encoded EspP); Autotransporter protein EspP translocator]
ruditapes_c22214	DNA topological change	DNA metabolism	P	DNA gyrase subunit B (EC 5.99.1.3)
ruditapes_c7415	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment)
ruditapes_c7415	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment)
ruditapes_c28290	porphyrin biosynthetic process	other metabolic processes	P	Oxygen-independent coproporphyrinogen-III oxidase (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.99.22)
ruditapes_c28290	oxidation reduction	other metabolic processes	P	Oxygen-independent coproporphyrinogen-III oxidase (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.99.22)
ruditapes_c12438	oxidation reduction	other metabolic processes	P	Putative oxidoreductase YtkK (EC 1.-.-.-)
ruditapes_c12438	metabolic process	other metabolic processes	P	Putative oxidoreductase YtkK (EC 1.-.-.-)
ruditapes_c22357	cyclic nucleotide biosynthetic process	other metabolic processes	P	Uncharacterized protein YtrP
ruditapes_c10114	DNA ligation	DNA metabolism	P	Probable ATP-dependent DNA ligase YkoU (EC 6.5.1.1)
ruditapes_c10114	response to DNA damage stimulus	stress response	P	Probable ATP-dependent DNA ligase YkoU (EC 6.5.1.1)
ruditapes_c10114	DNA repair	stress response	P	Probable ATP-dependent DNA ligase YkoU (EC 6.5.1.1)
ruditapes_c10114	DNA repair	DNA metabolism	P	Probable ATP-dependent DNA ligase YkoU (EC 6.5.1.1)
ruditapes_c10114	sporulation resulting in formation of a cellular spore	other biological processes	P	Probable ATP-dependent DNA ligase YkoU (EC 6.5.1.1)
ruditapes_c10114	DNA recombination	DNA metabolism	P	Probable ATP-dependent DNA ligase YkoU (EC 6.5.1.1)
ruditapes_c16975	methylation	other metabolic processes	P	Putative rRNA methylase YtqB (EC 2.1.1.-)
ruditapes_c24557	gluconeogenesis	other metabolic processes	P	"Probable L-serine dehydratase, beta chain (SDH) (EC 4.3.1.17) (L-serine deaminase) (L-SD)"
ruditapes_c24557	metabolic process	other metabolic processes	P	"Probable L-serine dehydratase, beta chain (SDH) (EC 4.3.1.17) (L-serine deaminase) (L-SD)"
ruditapes_c436	amino acid transport	transport	P	Probable glutamine ABC transporter permease protein GlnM
ruditapes_c436	transport	transport	P	Probable glutamine ABC transporter permease protein GlnM
ruditapes_c18539	cell division	other biological processes	P	Probable cell division protein YtgP
ruditapes_c18539	cell cycle	cell cycle and proliferation	P	Probable cell division protein YtgP
ruditapes_c18539	polysaccharide biosynthetic process	other metabolic processes	P	Probable cell division protein YtgP
ruditapes_c26471	phospholipid biosynthetic process	other metabolic processes	P	Putative lipid kinase YtlR (EC 2.7.1.-)
ruditapes_c26471	phosphorylation	other metabolic processes	P	Putative lipid kinase YtlR (EC 2.7.1.-)
ruditapes_c26471	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Putative lipid kinase YtlR (EC 2.7.1.-)
ruditapes_c26471	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Putative lipid kinase YtlR (EC 2.7.1.-)
ruditapes_lrc35211	cell division	other biological processes	P	Septation ring formation regulator EzrA
ruditapes_lrc35211	cell cycle	cell cycle and proliferation	P	Septation ring formation regulator EzrA
ruditapes_lrc35211	septin ring assembly	cell organization and biogenesis	P	Septation ring formation regulator EzrA
ruditapes_lrc35211	barrier septum formation	cell organization and biogenesis	P	Septation ring formation regulator EzrA
ruditapes_c23341	proteolysis	protein metabolism	P	Carboxy-terminal processing protease CtpB (C-terminal processing protease) (EC 3.4.21.102)
ruditapes_c23341	sporulation resulting in formation of a cellular spore	other biological processes	P	Carboxy-terminal processing protease CtpB (C-terminal processing protease) (EC 3.4.21.102)
ruditapes_c23341	metabolic process	other metabolic processes	P	Carboxy-terminal processing protease CtpB (C-terminal processing protease) (EC 3.4.21.102)
ruditapes_lrc19157	proteolysis	protein metabolism	P	Putative carboxypeptidase YocD (EC 3.4.16.-)
ruditapes_c15060	female pregnancy	other biological processes	P	Claudin-4 (Clostridium perfringens enterotoxin receptor) (CPE-R) (CPE-receptor)
ruditapes_c15060	response to progesterone stimulus	other biological processes	P	Claudin-4 (Clostridium perfringens enterotoxin receptor) (CPE-R) (CPE-receptor)
ruditapes_c15060	calcium-independent cell-cell adhesion	cell adhesion	P	Claudin-4 (Clostridium perfringens enterotoxin receptor) (CPE-R) (CPE-receptor)
ruditapes2_c1802	biological_process	other biological processes	P	Leucine-rich repeat-containing protein 23 (Leucine-rich protein B7)
ruditapes_c9446	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Prohibitin-2 (B-cell receptor-associated protein BAP37) (Repressor of estrogen receptor activity)
ruditapes_c9446	negative regulation of estrogen receptor signaling pathway	signal transduction	P	Prohibitin-2 (B-cell receptor-associated protein BAP37) (Repressor of estrogen receptor activity)
ruditapes_c9446	"transcription, DNA-dependent"	RNA metabolism	P	Prohibitin-2 (B-cell receptor-associated protein BAP37) (Repressor of estrogen receptor activity)
ruditapes_c9446	negative regulation of mammary gland epithelial cell proliferation	cell cycle and proliferation	P	Prohibitin-2 (B-cell receptor-associated protein BAP37) (Repressor of estrogen receptor activity)
ruditapes_c9446	negative regulation of mammary gland epithelial cell proliferation	developmental processes	P	Prohibitin-2 (B-cell receptor-associated protein BAP37) (Repressor of estrogen receptor activity)
ruditapes_c9446	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Prohibitin-2 (B-cell receptor-associated protein BAP37) (Repressor of estrogen receptor activity)
ruditapes_c2140	ribosome biogenesis	other biological processes	P	Ribosomal RNA small subunit methyltransferase NEP1 (EC 2.1.1.-) (18S rRNA (pseudouridine-N1-)-methyltransferase NEP1) (Nucleolar protein EMG1 homolog) (Protein C2f) (Ribosome biogenesis protein NEP1)
ruditapes_c2140	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase NEP1 (EC 2.1.1.-) (18S rRNA (pseudouridine-N1-)-methyltransferase NEP1) (Nucleolar protein EMG1 homolog) (Protein C2f) (Ribosome biogenesis protein NEP1)
ruditapes_c2140	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase NEP1 (EC 2.1.1.-) (18S rRNA (pseudouridine-N1-)-methyltransferase NEP1) (Nucleolar protein EMG1 homolog) (Protein C2f) (Ribosome biogenesis protein NEP1)
ruditapes_s39997	neuron migration	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	cell-cell signaling	cell-cell signaling	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	cell adhesion	cell adhesion	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	apical protein localization	other biological processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	regulation of actin cytoskeleton organization	cell organization and biogenesis	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	regulation of neurotransmitter secretion	transport	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	regulation of neurotransmitter secretion	cell-cell signaling	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	central nervous system development	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	signal transduction	signal transduction	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	homophilic cell adhesion	cell adhesion	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	neuropeptide signaling pathway	signal transduction	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	lateral sprouting involved in lung morphogenesis	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	locomotory behavior	other biological processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	gastrulation with mouth forming second	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	planar dichotomous subdivision of terminal units involved in lung branching morphogenesis	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	neural tube closure	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	G-protein coupled receptor protein signaling pathway	signal transduction	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	hair follicle development	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	establishment of polarity of embryonic epithelium	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	anterior/posterior pattern formation	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	establishment of planar polarity	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	Rho protein signal transduction	signal transduction	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	cell surface receptor linked signal transduction	signal transduction	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	establishment of body hair orientation	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	inner ear morphogenesis	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes_s39997	multicellular organismal development	developmental processes	P	Cadherin EGF LAG seven-pass G-type receptor 1
ruditapes2_c2125	proteolysis	protein metabolism	P	Cathepsin K (EC 3.4.22.38)
ruditapes2_c2125	bone resorption	other biological processes	P	Cathepsin K (EC 3.4.22.38)
ruditapes2_c2125	intramembranous ossification	developmental processes	P	Cathepsin K (EC 3.4.22.38)
ruditapes2_c1307	intramembranous ossification	developmental processes	P	Cathepsin K (EC 3.4.22.38)
ruditapes2_c1307	bone resorption	other biological processes	P	Cathepsin K (EC 3.4.22.38)
ruditapes2_c1307	proteolysis	protein metabolism	P	Cathepsin K (EC 3.4.22.38)
ruditapes_lrc13927	cellular calcium ion homeostasis	other biological processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	negative regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	regulation of cAMP metabolic process	other metabolic processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	ion transport	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	cell cycle arrest	cell cycle and proliferation	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	transmembrane calcium ion transport	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	determination of left/right symmetry	developmental processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	calcium ion transport	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	heart development	developmental processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	detection of mechanical stimulus	other biological processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	JAK-STAT cascade	signal transduction	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	positive regulation of gene expression	other metabolic processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	kidney development	developmental processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	transport	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	embryonic placenta development	developmental processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc13927	release of sequestered calcium ion into cytosol	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c24101	detection of stimulus involved in sensory perception	other biological processes	P	Serine/threonine-protein phosphatase with EF-hands 2 (PPEF-2) (EC 3.1.3.16)
ruditapes_c24101	negative regulation of peptidyl-threonine phosphorylation	protein metabolism	P	Serine/threonine-protein phosphatase with EF-hands 2 (PPEF-2) (EC 3.1.3.16)
ruditapes_c24101	response to stimulus	other biological processes	P	Serine/threonine-protein phosphatase with EF-hands 2 (PPEF-2) (EC 3.1.3.16)
ruditapes_c24101	negative regulation of MAPKKK cascade	signal transduction	P	Serine/threonine-protein phosphatase with EF-hands 2 (PPEF-2) (EC 3.1.3.16)
ruditapes_c24101	visual perception	other biological processes	P	Serine/threonine-protein phosphatase with EF-hands 2 (PPEF-2) (EC 3.1.3.16)
ruditapes_c25674	steroid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 2B member 1 (ST2B1) (Sulfotransferase 2B1) (EC 2.8.2.2) (Alcohol sulfotransferase) (Hydroxysteroid sulfotransferase 2)
ruditapes_c25674	sulfate assimilation	other metabolic processes	P	Sulfotransferase family cytosolic 2B member 1 (ST2B1) (Sulfotransferase 2B1) (EC 2.8.2.2) (Alcohol sulfotransferase) (Hydroxysteroid sulfotransferase 2)
ruditapes_c25674	lipid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 2B member 1 (ST2B1) (Sulfotransferase 2B1) (EC 2.8.2.2) (Alcohol sulfotransferase) (Hydroxysteroid sulfotransferase 2)
ruditapes_lrc36315	biological_process	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1) (Synapse differentiation-induced protein 4)
ruditapes_c5647	biological_process	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1) (Synapse differentiation-induced protein 4)
ruditapes_c1297	biological_process	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1) (Synapse differentiation-induced protein 4)
ruditapes2_c1358	biological_process	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1) (Synapse differentiation-induced protein 4)
ruditapes_c5647	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1) (Synapse differentiation-induced protein 4)
ruditapes_c14603	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1) (Synapse differentiation-induced protein 4)
ruditapes_c14603	biological_process	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1) (Synapse differentiation-induced protein 4)
ruditapes2_c1358	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1) (Synapse differentiation-induced protein 4)
ruditapes_lrc36315	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1) (Synapse differentiation-induced protein 4)
ruditapes_c1297	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1) (Synapse differentiation-induced protein 4)
ruditapes_c24906	detection of mechanical stimulus involved in sensory perception of sound	other biological processes	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	negative regulation of epithelial to mesenchymal transition	developmental processes	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	negative regulation of epithelial to mesenchymal transition	cell organization and biogenesis	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	positive regulation of cell growth	other biological processes	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	positive regulation of gene expression	other metabolic processes	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	negative regulation of epithelial cell proliferation	cell cycle and proliferation	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	positive regulation of plasminogen activation	protein metabolism	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	epithelium development	developmental processes	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	basement membrane disassembly	cell organization and biogenesis	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	proteolysis	protein metabolism	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	negative regulation of apoptosis	death	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	positive regulation by host of viral transcription	RNA metabolism	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c24906	regulation of cell shape	cell organization and biogenesis	P	Serine protease hepsin (EC 3.4.21.106) [Cleaved into: Serine protease hepsin non-catalytic chain; Serine protease hepsin catalytic chain]
ruditapes_c19488	ion transport	transport	P	Chloride transport protein 6 (Chloride channel protein 6) (ClC-6)
ruditapes_c19488	chloride transport	transport	P	Chloride transport protein 6 (Chloride channel protein 6) (ClC-6)
ruditapes_c19488	transport	transport	P	Chloride transport protein 6 (Chloride channel protein 6) (ClC-6)
ruditapes_c19488	transmembrane transport	transport	P	Chloride transport protein 6 (Chloride channel protein 6) (ClC-6)
ruditapes_c22486	biological_process	other biological processes	P	"Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial (EC 5.3.3.-)"
ruditapes_c22486	metabolic process	other metabolic processes	P	"Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial (EC 5.3.3.-)"
ruditapes_c22486	fatty acid metabolic process	other metabolic processes	P	"Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial (EC 5.3.3.-)"
ruditapes_c22486	lipid metabolic process	other metabolic processes	P	"Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial (EC 5.3.3.-)"
ruditapes_c31795	response to radiation	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	response to organic cyclic substance	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	Tie receptor signaling pathway	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	response to mechanical stimulus	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	response to hypoxia	stress response	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	cell differentiation	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	response to activity	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	negative regulation of blood vessel endothelial cell migration	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	negative regulation of positive chemotaxis	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	negative regulation of angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	multicellular organismal development	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	negative regulation of cell-substrate adhesion	cell adhesion	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	response to glucose stimulus	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	blood vessel morphogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	positive regulation of angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	organ regeneration	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	signal transduction	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	germ cell development	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c31795	maternal process involved in pregnancy	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c26872	embryonic limb morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	positive regulation of Ras protein signal transduction	signal transduction	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	Notch signaling pathway	signal transduction	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	"transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	inflammatory response to antigenic stimulus	stress response	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	negative regulation of cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	wound healing	stress response	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	multicellular organismal development	developmental processes	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	cell fate determination	other biological processes	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	cell growth	other biological processes	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	humoral immune response	other biological processes	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	positive regulation of apoptosis	death	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	positive regulation of osteoclast differentiation	developmental processes	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	regulation of developmental process	other biological processes	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	cell differentiation	other biological processes	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	organ morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	determination of left/right symmetry	developmental processes	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	morphogenesis of an epithelial sheet	developmental processes	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c26872	cell cycle arrest	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 2 (Notch 2) (Motch B) [Cleaved into: Notch 2 extracellular truncation; Notch 2 intracellular domain]
ruditapes_c19126	metabolic process	other metabolic processes	P	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 (6PF-2-K/Fru-2,6-P2ase 3) (PFK/FBPase 3) (6PF-2-K/Fru-2,6-P2ase brain-type isozyme) (RB2K) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]"
ruditapes_c19126	"fructose 2,6-bisphosphate metabolic process"	other metabolic processes	P	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 (6PF-2-K/Fru-2,6-P2ase 3) (PFK/FBPase 3) (6PF-2-K/Fru-2,6-P2ase brain-type isozyme) (RB2K) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]"
ruditapes_c19126	fructose metabolic process	other metabolic processes	P	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 (6PF-2-K/Fru-2,6-P2ase 3) (PFK/FBPase 3) (6PF-2-K/Fru-2,6-P2ase brain-type isozyme) (RB2K) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]"
ruditapes_c19126	phosphorylation	other metabolic processes	P	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 (6PF-2-K/Fru-2,6-P2ase 3) (PFK/FBPase 3) (6PF-2-K/Fru-2,6-P2ase brain-type isozyme) (RB2K) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]"
ruditapes_c12406	proteolysis	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 14 (EC 3.4.19.-) (26S proteasome regulatory subunit RPN11) (MAD1)
ruditapes_c7775	positive regulation of endopeptidase activity	other biological processes	P	26S proteasome non-ATPase regulatory subunit 14 (EC 3.4.19.-) (26S proteasome regulatory subunit RPN11) (MAD1)
ruditapes_c12406	positive regulation of endopeptidase activity	other biological processes	P	26S proteasome non-ATPase regulatory subunit 14 (EC 3.4.19.-) (26S proteasome regulatory subunit RPN11) (MAD1)
ruditapes_c7775	proteolysis	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 14 (EC 3.4.19.-) (26S proteasome regulatory subunit RPN11) (MAD1)
ruditapes_c14054	phototransduction	other biological processes	P	Medium-wave-sensitive opsin 1 (Green cone photoreceptor pigment) (Green-sensitive opsin) (M opsin) (Medium wavelength-sensitive cone opsin)
ruditapes_c14054	visual perception	other biological processes	P	Medium-wave-sensitive opsin 1 (Green cone photoreceptor pigment) (Green-sensitive opsin) (M opsin) (Medium wavelength-sensitive cone opsin)
ruditapes_c14054	response to stimulus	other biological processes	P	Medium-wave-sensitive opsin 1 (Green cone photoreceptor pigment) (Green-sensitive opsin) (M opsin) (Medium wavelength-sensitive cone opsin)
ruditapes_c14054	signal transduction	signal transduction	P	Medium-wave-sensitive opsin 1 (Green cone photoreceptor pigment) (Green-sensitive opsin) (M opsin) (Medium wavelength-sensitive cone opsin)
ruditapes_c14054	protein-chromophore linkage	protein metabolism	P	Medium-wave-sensitive opsin 1 (Green cone photoreceptor pigment) (Green-sensitive opsin) (M opsin) (Medium wavelength-sensitive cone opsin)
ruditapes_c14054	G-protein coupled receptor protein signaling pathway	signal transduction	P	Medium-wave-sensitive opsin 1 (Green cone photoreceptor pigment) (Green-sensitive opsin) (M opsin) (Medium wavelength-sensitive cone opsin)
ruditapes_c9647	vesicle fusion with Golgi apparatus	transport	P	BET1 homolog (mBET1) (Golgi vesicular membrane-trafficking protein p18)
ruditapes_c9647	vesicle fusion with Golgi apparatus	cell organization and biogenesis	P	BET1 homolog (mBET1) (Golgi vesicular membrane-trafficking protein p18)
ruditapes_c9647	protein transport	transport	P	BET1 homolog (mBET1) (Golgi vesicular membrane-trafficking protein p18)
ruditapes_c9647	vesicle-mediated transport	transport	P	BET1 homolog (mBET1) (Golgi vesicular membrane-trafficking protein p18)
ruditapes_c9647	transport	transport	P	BET1 homolog (mBET1) (Golgi vesicular membrane-trafficking protein p18)
ruditapes_c9647	ER to Golgi vesicle-mediated transport	transport	P	BET1 homolog (mBET1) (Golgi vesicular membrane-trafficking protein p18)
ruditapes_c17563	detection of stimulus involved in sensory perception	other biological processes	P	Serine/threonine-protein phosphatase with EF-hands 1 (PPEF-1) (EC 3.1.3.16) (DRES10) (Protein phosphatase with EF calcium-binding domain) (PPEF)
ruditapes2_c75	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (Complex I-MWFE) (CI-MWFE) (NADH-ubiquinone oxidoreductase MWFE subunit)
ruditapes2_c1458	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (Complex I-MWFE) (CI-MWFE) (NADH-ubiquinone oxidoreductase MWFE subunit)
ruditapes2_c4631	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (Complex I-MWFE) (CI-MWFE) (NADH-ubiquinone oxidoreductase MWFE subunit)
ruditapes2_c5069	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (Complex I-MWFE) (CI-MWFE) (NADH-ubiquinone oxidoreductase MWFE subunit)
ruditapes2_c4631	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (Complex I-MWFE) (CI-MWFE) (NADH-ubiquinone oxidoreductase MWFE subunit)
ruditapes2_c1458	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (Complex I-MWFE) (CI-MWFE) (NADH-ubiquinone oxidoreductase MWFE subunit)
ruditapes2_c5069	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (Complex I-MWFE) (CI-MWFE) (NADH-ubiquinone oxidoreductase MWFE subunit)
ruditapes2_c75	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (Complex I-MWFE) (CI-MWFE) (NADH-ubiquinone oxidoreductase MWFE subunit)
ruditapes_c19287	multicellular organismal development	developmental processes	P	Ectoderm-neural cortex protein 1 (ENC-1)
ruditapes2_c1036	immune response	other biological processes	P	"Complement component 1 Q subcomponent-binding protein, mitochondrial (GC1q-R protein) (Glycoprotein gC1qBP) (C1qBP)"
ruditapes2_c517	immune response	other biological processes	P	"Complement component 1 Q subcomponent-binding protein, mitochondrial (GC1q-R protein) (Glycoprotein gC1qBP) (C1qBP)"
ruditapes2_c379	spermatogenesis	other biological processes	P	A-kinase anchor protein 14 (AKAP-14) (TAKAP-1.2) (Testis-specific A-kinase-anchoring protein TAKAP-80)
ruditapes_c12183	mRNA processing	RNA metabolism	P	U6 snRNA-associated Sm-like protein LSm2 (Protein G7b) (snRNP core Sm-like protein Sm-x5)
ruditapes_c12183	RNA splicing	RNA metabolism	P	U6 snRNA-associated Sm-like protein LSm2 (Protein G7b) (snRNP core Sm-like protein Sm-x5)
ruditapes_lrc36675	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein basonuclin-1
ruditapes_lrc36675	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein basonuclin-1
ruditapes_c17325	nucleocytoplasmic transport	transport	P	Uncharacterized WD repeat-containing protein C4F10.18
ruditapes2_c1949	transport	transport	P	Glutaredoxin-1
ruditapes2_c1949	electron transport chain	other metabolic processes	P	Glutaredoxin-1
ruditapes2_c1949	cellular response to oxidative stress	stress response	P	Glutaredoxin-1
ruditapes2_c1949	removal of superoxide radicals	other metabolic processes	P	Glutaredoxin-1
ruditapes2_c1949	cell redox homeostasis	other biological processes	P	Glutaredoxin-1
ruditapes2_c1949	cellular response to heat	stress response	P	Glutaredoxin-1
ruditapes2_c1949	cellular response to stress	stress response	P	Glutaredoxin-1
ruditapes_c16157	DNA packaging	cell organization and biogenesis	P	Portal protein 43
ruditapes_lrc39408	DNA replication	DNA metabolism	P	Probable ATP-dependent helicase 44 (EC 3.6.4.-)
ruditapes_c28630	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	metabolic process	other metabolic processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	ion transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	transformation of host cell by virus	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	apoptosis	death	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28630	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_lrc33144	regulation of cell division	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_lrc8151	regulation of cell division	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes2_lrc3930	regulation of cell division	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_lrc32644	regulation of cell division	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_lrc33417	regulation of cell division	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes2_lrc3930	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_lrc33417	regulation of protein localization	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_lrc33144	regulation of protein localization	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_lrc8151	regulation of protein localization	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_lrc33417	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_lrc8151	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_lrc33144	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes2_lrc3930	regulation of protein localization	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_lrc32644	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_lrc32644	regulation of protein localization	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor of activated protein kinase C) (RACK)
ruditapes_c13753	neurotransmitter catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13753	neurotransmitter catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes2_c234	hormone biosynthetic process	other metabolic processes	P	Type I iodothyronine deiodinase (EC 1.97.1.10) (5DI) (DIOI) (Type 1 DI) (Type-I 5'-deiodinase) (Fragment)
ruditapes2_c234	oxidation reduction	other metabolic processes	P	Type I iodothyronine deiodinase (EC 1.97.1.10) (5DI) (DIOI) (Type 1 DI) (Type-I 5'-deiodinase) (Fragment)
ruditapes_lrc28034	retinal ganglion cell axon guidance	developmental processes	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	retinal ganglion cell axon guidance	cell organization and biogenesis	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	branching morphogenesis of a nerve	developmental processes	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	negative chemotaxis	other biological processes	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	axon guidance	developmental processes	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	axon guidance	cell organization and biogenesis	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	protein amino acid phosphorylation	protein metabolism	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	ephrin receptor signaling pathway	signal transduction	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	nervous system development	developmental processes	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	positive regulation of neuron apoptosis	death	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	phosphorylation	other metabolic processes	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	regulation of protein amino acid autophosphorylation	protein metabolism	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	regulation of ERK1 and ERK2 cascade	signal transduction	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	brain development	developmental processes	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	regulation of cell-cell adhesion	cell adhesion	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	apoptosis	death	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	multicellular organismal development	developmental processes	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc28034	regulation of caspase activity	death	P	Ephrin type-A receptor 7 (EC 2.7.10.1) (EPH-like kinase 11) (EK11) (cEK11) (Tyrosine-protein kinase receptor CEPHA7)
ruditapes_lrc39077	response to stimulus	other biological processes	P	Rhodopsin (Fragment)
ruditapes_lrc39077	visual perception	other biological processes	P	Rhodopsin (Fragment)
ruditapes_lrc39077	G-protein coupled receptor protein signaling pathway	signal transduction	P	Rhodopsin (Fragment)
ruditapes_lrc39077	signal transduction	signal transduction	P	Rhodopsin (Fragment)
ruditapes_lrc39077	protein-chromophore linkage	protein metabolism	P	Rhodopsin (Fragment)
ruditapes_lrc39077	phototransduction	other biological processes	P	Rhodopsin (Fragment)
ruditapes_c24978	proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 22 (ADAM 22) (MDC11.2) (Metalloprotease-disintegrin MDC11b)
ruditapes_c23335	spliceosome disassembly	RNA metabolism	P	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 (EC 3.6.4.13)
ruditapes_c23335	spliceosome disassembly	cell organization and biogenesis	P	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 (EC 3.6.4.13)
ruditapes_c23335	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 (EC 3.6.4.13)
ruditapes_c23335	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 (EC 3.6.4.13)
ruditapes_c27793	meiosis	cell cycle and proliferation	P	Meiotically up-regulated gene 94 protein
ruditapes_lrc36628	synapsis	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	synapsis	cell organization and biogenesis	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	meiosis	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	meiosis	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	reciprocal meiotic recombination	DNA metabolism	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	reciprocal meiotic recombination	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	reciprocal meiotic recombination	DNA metabolism	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	cellular morphogenesis during conjugation with cellular fusion	cell organization and biogenesis	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	ascospore formation	other biological processes	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	nuclear migration during conjugation with cellular fusion	cell organization and biogenesis	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	horsetail nuclear movement	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	horsetail nuclear movement	transport	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	nuclear migration during conjugation with cellular fusion	transport	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	nuclear migration during conjugation with cellular fusion	cell organization and biogenesis	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	reciprocal meiotic recombination	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	cellular protein localization	other biological processes	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	ascospore formation	other biological processes	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	meiosis I	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	cellular protein localization	other biological processes	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	nuclear migration during conjugation with cellular fusion	transport	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	horsetail nuclear movement	transport	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	meiosis	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	meiosis I	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	meiosis I	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	cellular protein localization	other biological processes	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	synapsis	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	synapsis	cell organization and biogenesis	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	horsetail nuclear movement	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	horsetail nuclear movement	transport	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	horsetail nuclear movement	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	nuclear migration during conjugation with cellular fusion	cell organization and biogenesis	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	synapsis	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc39609	synapsis	cell organization and biogenesis	P	Microtubule-associated protein ssm4
ruditapes_lrc36628	cellular morphogenesis during conjugation with cellular fusion	cell organization and biogenesis	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	ascospore formation	other biological processes	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	cellular morphogenesis during conjugation with cellular fusion	cell organization and biogenesis	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	reciprocal meiotic recombination	cell cycle and proliferation	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	reciprocal meiotic recombination	DNA metabolism	P	Microtubule-associated protein ssm4
ruditapes_lrc36840	nuclear migration during conjugation with cellular fusion	transport	P	Microtubule-associated protein ssm4
ruditapes_c1595	ATP catabolic process	other metabolic processes	P	Opaque-specific ABC transporter CDR3
ruditapes_c1595	transport	transport	P	Opaque-specific ABC transporter CDR3
ruditapes_c3723	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase 2 (EC 2.7.11.24) (PCM)
ruditapes_c3723	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase 2 (EC 2.7.11.24) (PCM)
ruditapes_c3723	response to pheromone	other biological processes	P	Mitogen-activated protein kinase 2 (EC 2.7.11.24) (PCM)
ruditapes_c3723	signal transduction	signal transduction	P	Mitogen-activated protein kinase 2 (EC 2.7.11.24) (PCM)
ruditapes_c3723	cell cycle arrest in response to pheromone	cell cycle and proliferation	P	Mitogen-activated protein kinase 2 (EC 2.7.11.24) (PCM)
ruditapes2_c1141	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes2_c1141	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes2_c1141	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes2_c1303	chromatin remodeling	cell organization and biogenesis	P	Set1 complex component swd1 (Set1C component swd1) (COMPASS component swd1) (Complex proteins associated with set1 protein swd1)
ruditapes2_c1303	histone methylation	protein metabolism	P	Set1 complex component swd1 (Set1C component swd1) (COMPASS component swd1) (Complex proteins associated with set1 protein swd1)
ruditapes2_c1303	histone methylation	cell organization and biogenesis	P	Set1 complex component swd1 (Set1C component swd1) (COMPASS component swd1) (Complex proteins associated with set1 protein swd1)
ruditapes2_c1303	histone H3-K4 methylation	protein metabolism	P	Set1 complex component swd1 (Set1C component swd1) (COMPASS component swd1) (Complex proteins associated with set1 protein swd1)
ruditapes2_c1303	histone H3-K4 methylation	cell organization and biogenesis	P	Set1 complex component swd1 (Set1C component swd1) (COMPASS component swd1) (Complex proteins associated with set1 protein swd1)
ruditapes_c27268	cellular response to oxidative stress	stress response	P	RNA-binding post-transcriptional regulator cip1 (Csx1-interacting protein 1)
ruditapes_c8717	protein amino acid O-linked mannosylation	protein metabolism	P	"O-glycoside alpha-1,2-mannosyltransferase homolog 2 (EC 2.4.1.-)"
ruditapes_c8717	cell wall mannoprotein biosynthetic process	other metabolic processes	P	"O-glycoside alpha-1,2-mannosyltransferase homolog 2 (EC 2.4.1.-)"
ruditapes_c8717	protein amino acid glycosylation	protein metabolism	P	"O-glycoside alpha-1,2-mannosyltransferase homolog 2 (EC 2.4.1.-)"
ruditapes_c4790	intra-Golgi vesicle-mediated transport	transport	P	Conserved oligomeric Golgi complex subunit 5 (COG complex subunit 5)
ruditapes_c4790	intracellular protein transport	transport	P	Conserved oligomeric Golgi complex subunit 5 (COG complex subunit 5)
ruditapes_c22886	biological_process	other biological processes	P	UPF0588 membrane protein C20F10.02c
ruditapes_s35648	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_s35648	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc5588	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc7355	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_lrc34285	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_s40455	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_s37644	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc3545	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_lrc36771	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_c4287	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_lrc34285	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_c3919	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc7355	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_s37644	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_c3919	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_s37644	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_lrc36771	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_s39608	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_c4287	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc5779	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_c4287	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc5588	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_lrc36771	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_s40455	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_s39608	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc7355	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc5779	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_s39608	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_s40455	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_c3919	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc3545	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc5779	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc3545	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_lrc34285	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes2_lrc5588	conjugation with cellular fusion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_s35648	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (FK506-binding protein) (FKBP)
ruditapes_c25188	phosphoinositide dephosphorylation	other metabolic processes	P	"Inositol-1,4,5-trisphosphate 5-phosphatase 1 (EC 3.1.3.36) (Synaptojanin-like protein 1)"
ruditapes_c25188	lipid metabolic process	other metabolic processes	P	"Inositol-1,4,5-trisphosphate 5-phosphatase 1 (EC 3.1.3.36) (Synaptojanin-like protein 1)"
ruditapes_c25188	endocytosis	transport	P	"Inositol-1,4,5-trisphosphate 5-phosphatase 1 (EC 3.1.3.36) (Synaptojanin-like protein 1)"
ruditapes_c25188	endocytosis	cell organization and biogenesis	P	"Inositol-1,4,5-trisphosphate 5-phosphatase 1 (EC 3.1.3.36) (Synaptojanin-like protein 1)"
ruditapes_c25188	phosphatidylinositol metabolic process	other metabolic processes	P	"Inositol-1,4,5-trisphosphate 5-phosphatase 1 (EC 3.1.3.36) (Synaptojanin-like protein 1)"
ruditapes_c25188	protein transport	transport	P	"Inositol-1,4,5-trisphosphate 5-phosphatase 1 (EC 3.1.3.36) (Synaptojanin-like protein 1)"
ruditapes_c25188	phosphoinositide phosphorylation	other metabolic processes	P	"Inositol-1,4,5-trisphosphate 5-phosphatase 1 (EC 3.1.3.36) (Synaptojanin-like protein 1)"
ruditapes_c25188	inositol lipid-mediated signaling	signal transduction	P	"Inositol-1,4,5-trisphosphate 5-phosphatase 1 (EC 3.1.3.36) (Synaptojanin-like protein 1)"
ruditapes_c25188	transport	transport	P	"Inositol-1,4,5-trisphosphate 5-phosphatase 1 (EC 3.1.3.36) (Synaptojanin-like protein 1)"
ruditapes2_c1350	translation	protein metabolism	P	60S ribosomal protein L16-C
ruditapes_c26279	biological_process	other biological processes	P	Uncharacterized protein C354.08c
ruditapes_c8531	biological_process	other biological processes	P	Uncharacterized protein C354.08c
ruditapes_c30686	biological_process	other biological processes	P	Uncharacterized membrane protein C354.11c
ruditapes_c5697	positive regulation of GTPase activity	other biological processes	P	Probable Rho-GTPase-activating protein 6
ruditapes_c5697	signal transduction	signal transduction	P	Probable Rho-GTPase-activating protein 6
ruditapes_c9470	sterol regulatory element binding protein cleavage	signal transduction	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c9470	sterol regulatory element binding protein cleavage	protein metabolism	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c9470	steroid metabolic process	other metabolic processes	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c9470	lipid metabolic process	other metabolic processes	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c9470	protein stabilization	protein metabolism	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c9470	positive regulation of transcription via sterol regulatory element binding	signal transduction	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c9470	positive regulation of transcription via sterol regulatory element binding	RNA metabolism	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c9470	triglyceride biosynthetic process	other metabolic processes	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c9470	positive regulation of ergosterol biosynthetic process	other metabolic processes	P	Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein)
ruditapes_c20787	ribosome biogenesis	other biological processes	P	Probable nucleolar complex protein 14
ruditapes_c20787	rRNA processing	RNA metabolism	P	Probable nucleolar complex protein 14
ruditapes_c20787	ribosomal small subunit biogenesis	other biological processes	P	Probable nucleolar complex protein 14
ruditapes_c20787	maturation of SSU-rRNA	RNA metabolism	P	Probable nucleolar complex protein 14
ruditapes_s37042	positive regulation of GTPase activity	other biological processes	P	Rho-type GTPase-activating protein 1
ruditapes_s37042	signal transduction	signal transduction	P	Rho-type GTPase-activating protein 1
ruditapes_s37042	regulation of cell shape	cell organization and biogenesis	P	Rho-type GTPase-activating protein 1
ruditapes_s37042	actin cytoskeleton organization	cell organization and biogenesis	P	Rho-type GTPase-activating protein 1
ruditapes_s37042	fungal-type cell wall biogenesis	other biological processes	P	Rho-type GTPase-activating protein 1
ruditapes_s37042	actin cortical patch localization	other biological processes	P	Rho-type GTPase-activating protein 1
ruditapes_s37042	positive regulation of Rho GTPase activity	signal transduction	P	Rho-type GTPase-activating protein 1
ruditapes_c9626	cell adhesion	cell adhesion	P	Leucine-rich repeat transmembrane protein FLRT2 (Fibronectin-like domain-containing leucine-rich transmembrane protein 2)
ruditapes_c9626	biological_process	other biological processes	P	Leucine-rich repeat transmembrane protein FLRT2 (Fibronectin-like domain-containing leucine-rich transmembrane protein 2)
ruditapes_c8112	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 39
ruditapes_c8112	signal transduction	signal transduction	P	G-protein coupled receptor 39
ruditapes_c20428	reciprocal meiotic recombination	cell cycle and proliferation	P	MutS protein homolog 5 (hMSH5)
ruditapes_c20428	reciprocal meiotic recombination	DNA metabolism	P	MutS protein homolog 5 (hMSH5)
ruditapes_c20428	homologous chromosome segregation	cell cycle and proliferation	P	MutS protein homolog 5 (hMSH5)
ruditapes_c20428	meiotic prophase II	cell cycle and proliferation	P	MutS protein homolog 5 (hMSH5)
ruditapes_c20428	meiosis	cell cycle and proliferation	P	MutS protein homolog 5 (hMSH5)
ruditapes_c20428	mismatch repair	stress response	P	MutS protein homolog 5 (hMSH5)
ruditapes_c20428	mismatch repair	DNA metabolism	P	MutS protein homolog 5 (hMSH5)
ruditapes_c20428	chiasma formation	cell cycle and proliferation	P	MutS protein homolog 5 (hMSH5)
ruditapes_c20428	chiasma formation	cell organization and biogenesis	P	MutS protein homolog 5 (hMSH5)
ruditapes_c20428	meiotic mismatch repair	cell cycle and proliferation	P	MutS protein homolog 5 (hMSH5)
ruditapes_c20428	meiotic mismatch repair	stress response	P	MutS protein homolog 5 (hMSH5)
ruditapes_c20428	meiotic mismatch repair	DNA metabolism	P	MutS protein homolog 5 (hMSH5)
ruditapes_c28483	microspike assembly	cell organization and biogenesis	P	Metastasis suppressor protein 1 (Metastasis suppressor YGL-1) (Missing in metastasis protein)
ruditapes_c28483	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Metastasis suppressor protein 1 (Metastasis suppressor YGL-1) (Missing in metastasis protein)
ruditapes_c28483	signal transduction	signal transduction	P	Metastasis suppressor protein 1 (Metastasis suppressor YGL-1) (Missing in metastasis protein)
ruditapes_c28483	cell adhesion	cell adhesion	P	Metastasis suppressor protein 1 (Metastasis suppressor YGL-1) (Missing in metastasis protein)
ruditapes_c28483	actin cytoskeleton organization	cell organization and biogenesis	P	Metastasis suppressor protein 1 (Metastasis suppressor YGL-1) (Missing in metastasis protein)
ruditapes_c28483	cell motion	other biological processes	P	Metastasis suppressor protein 1 (Metastasis suppressor YGL-1) (Missing in metastasis protein)
ruditapes_c28483	filopodium assembly	cell organization and biogenesis	P	Metastasis suppressor protein 1 (Metastasis suppressor YGL-1) (Missing in metastasis protein)
ruditapes_c28483	negative regulation of epithelial cell proliferation	cell cycle and proliferation	P	Metastasis suppressor protein 1 (Metastasis suppressor YGL-1) (Missing in metastasis protein)
ruditapes_c18103	phosphorylation	other metabolic processes	P	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 (EC 2.7.4.21) (EC 2.7.4.24) (Diphosphoinositol pentakisphosphate kinase 2) (Histidine acid phosphatase domain-containing protein 1) (InsP6 and PP-IP5 kinase 2) (VIP1 homolog 2) (hsVIP2)
ruditapes_c18103	inositol metabolic process	other metabolic processes	P	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 (EC 2.7.4.21) (EC 2.7.4.24) (Diphosphoinositol pentakisphosphate kinase 2) (Histidine acid phosphatase domain-containing protein 1) (InsP6 and PP-IP5 kinase 2) (VIP1 homolog 2) (hsVIP2)
ruditapes_c7149	positive regulation of apoptosis	death	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c7149	translation	protein metabolism	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c7149	gene expression	other metabolic processes	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c18677	translation	protein metabolism	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c18677	negative regulation of cell proliferation	cell cycle and proliferation	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c7149	negative regulation of cell proliferation	cell cycle and proliferation	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c7149	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c7149	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c18677	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c18677	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c18677	gene expression	other metabolic processes	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c7149	tRNA aminoacylation for protein translation	protein metabolism	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c7149	tRNA aminoacylation for protein translation	RNA metabolism	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c18677	tRNA aminoacylation for protein translation	protein metabolism	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c18677	tRNA aminoacylation for protein translation	RNA metabolism	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c18677	positive regulation of apoptosis	death	P	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)
ruditapes_c15987	epidermis development	developmental processes	P	Protein-glutamine gamma-glutamyltransferase 5 (EC 2.3.2.13) (Transglutaminase X) (TG(X)) (TGX) (TGase X) (Transglutaminase-5) (TGase-5)
ruditapes_c15987	peptide cross-linking	protein metabolism	P	Protein-glutamine gamma-glutamyltransferase 5 (EC 2.3.2.13) (Transglutaminase X) (TG(X)) (TGX) (TGase X) (Transglutaminase-5) (TGase-5)
ruditapes_c15987	protein modification process	protein metabolism	P	Protein-glutamine gamma-glutamyltransferase 5 (EC 2.3.2.13) (Transglutaminase X) (TG(X)) (TGX) (TGase X) (Transglutaminase-5) (TGase-5)
ruditapes_c8333	release of cytoplasmic sequestered NF-kappaB	signal transduction	P	"Tumor necrosis factor ligand superfamily member 14 (Herpes virus entry mediator ligand) (HVEM-L) (Herpesvirus entry mediator ligand) (CD antigen CD258) [Cleaved into: Tumor necrosis factor ligand superfamily member 14, membrane form; Tumor necrosis factor ligand superfamily member 14, soluble form]"
ruditapes_c8333	release of cytoplasmic sequestered NF-kappaB	transport	P	"Tumor necrosis factor ligand superfamily member 14 (Herpes virus entry mediator ligand) (HVEM-L) (Herpesvirus entry mediator ligand) (CD antigen CD258) [Cleaved into: Tumor necrosis factor ligand superfamily member 14, membrane form; Tumor necrosis factor ligand superfamily member 14, soluble form]"
ruditapes_c8333	induction of apoptosis	death	P	"Tumor necrosis factor ligand superfamily member 14 (Herpes virus entry mediator ligand) (HVEM-L) (Herpesvirus entry mediator ligand) (CD antigen CD258) [Cleaved into: Tumor necrosis factor ligand superfamily member 14, membrane form; Tumor necrosis factor ligand superfamily member 14, soluble form]"
ruditapes_c8333	negative regulation of caspase activity	death	P	"Tumor necrosis factor ligand superfamily member 14 (Herpes virus entry mediator ligand) (HVEM-L) (Herpesvirus entry mediator ligand) (CD antigen CD258) [Cleaved into: Tumor necrosis factor ligand superfamily member 14, membrane form; Tumor necrosis factor ligand superfamily member 14, soluble form]"
ruditapes_c8333	T cell activation	other biological processes	P	"Tumor necrosis factor ligand superfamily member 14 (Herpes virus entry mediator ligand) (HVEM-L) (Herpesvirus entry mediator ligand) (CD antigen CD258) [Cleaved into: Tumor necrosis factor ligand superfamily member 14, membrane form; Tumor necrosis factor ligand superfamily member 14, soluble form]"
ruditapes_c8333	signal transduction	signal transduction	P	"Tumor necrosis factor ligand superfamily member 14 (Herpes virus entry mediator ligand) (HVEM-L) (Herpesvirus entry mediator ligand) (CD antigen CD258) [Cleaved into: Tumor necrosis factor ligand superfamily member 14, membrane form; Tumor necrosis factor ligand superfamily member 14, soluble form]"
ruditapes_c8333	immune response	other biological processes	P	"Tumor necrosis factor ligand superfamily member 14 (Herpes virus entry mediator ligand) (HVEM-L) (Herpesvirus entry mediator ligand) (CD antigen CD258) [Cleaved into: Tumor necrosis factor ligand superfamily member 14, membrane form; Tumor necrosis factor ligand superfamily member 14, soluble form]"
ruditapes_c8333	T cell homeostasis	other biological processes	P	"Tumor necrosis factor ligand superfamily member 14 (Herpes virus entry mediator ligand) (HVEM-L) (Herpesvirus entry mediator ligand) (CD antigen CD258) [Cleaved into: Tumor necrosis factor ligand superfamily member 14, membrane form; Tumor necrosis factor ligand superfamily member 14, soluble form]"
ruditapes_c8333	T cell proliferation	cell cycle and proliferation	P	"Tumor necrosis factor ligand superfamily member 14 (Herpes virus entry mediator ligand) (HVEM-L) (Herpesvirus entry mediator ligand) (CD antigen CD258) [Cleaved into: Tumor necrosis factor ligand superfamily member 14, membrane form; Tumor necrosis factor ligand superfamily member 14, soluble form]"
ruditapes_c8333	T cell costimulation	other biological processes	P	"Tumor necrosis factor ligand superfamily member 14 (Herpes virus entry mediator ligand) (HVEM-L) (Herpesvirus entry mediator ligand) (CD antigen CD258) [Cleaved into: Tumor necrosis factor ligand superfamily member 14, membrane form; Tumor necrosis factor ligand superfamily member 14, soluble form]"
ruditapes_c15689	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Complex I-B8) (CI-B8) (NADH-ubiquinone oxidoreductase B8 subunit)
ruditapes_c15689	respiratory electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Complex I-B8) (CI-B8) (NADH-ubiquinone oxidoreductase B8 subunit)
ruditapes_c15689	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Complex I-B8) (CI-B8) (NADH-ubiquinone oxidoreductase B8 subunit)
ruditapes_c15689	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Complex I-B8) (CI-B8) (NADH-ubiquinone oxidoreductase B8 subunit)
ruditapes_c5284	metabolic process	other metabolic processes	P	Lipid phosphate phosphohydrolase 2 (EC 3.1.3.4) (PAP2-gamma) (PAP2-G) (Phosphatidate phosphohydrolase type 2c) (Phosphatidic acid phosphatase 2c) (PAP-2c) (PAP2c)
ruditapes_c5284	sphingolipid metabolic process	other metabolic processes	P	Lipid phosphate phosphohydrolase 2 (EC 3.1.3.4) (PAP2-gamma) (PAP2-G) (Phosphatidate phosphohydrolase type 2c) (Phosphatidic acid phosphatase 2c) (PAP-2c) (PAP2c)
ruditapes_c5284	sphingolipid biosynthetic process	other metabolic processes	P	Lipid phosphate phosphohydrolase 2 (EC 3.1.3.4) (PAP2-gamma) (PAP2-G) (Phosphatidate phosphohydrolase type 2c) (Phosphatidic acid phosphatase 2c) (PAP-2c) (PAP2c)
ruditapes_c4770	phenol metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (Sulfotransferase 1B2) (ST1B2) (Thyroid hormone sulfotransferase)
ruditapes_c4770	thyroid hormone metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (Sulfotransferase 1B2) (ST1B2) (Thyroid hormone sulfotransferase)
ruditapes_c4770	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (Sulfotransferase 1B2) (ST1B2) (Thyroid hormone sulfotransferase)
ruditapes_c4770	3'-phosphoadenosine 5'-phosphosulfate metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (Sulfotransferase 1B2) (ST1B2) (Thyroid hormone sulfotransferase)
ruditapes_c4770	sulfation	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (Sulfotransferase 1B2) (ST1B2) (Thyroid hormone sulfotransferase)
ruditapes_c4770	steroid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (Sulfotransferase 1B2) (ST1B2) (Thyroid hormone sulfotransferase)
ruditapes_c4770	metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (Sulfotransferase 1B2) (ST1B2) (Thyroid hormone sulfotransferase)
ruditapes_c4770	flavonoid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (Sulfotransferase 1B2) (ST1B2) (Thyroid hormone sulfotransferase)
ruditapes_c4770	biogenic amine metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (Sulfotransferase 1B2) (ST1B2) (Thyroid hormone sulfotransferase)
ruditapes_c4770	lipid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (Sulfotransferase 1B2) (ST1B2) (Thyroid hormone sulfotransferase)
ruditapes_c11750	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-interacting protein 2 (RRP9 homolog) (U3 small nucleolar ribonucleoprotein-associated 55 kDa protein) (U3 snoRNP-associated 55 kDa protein) (U3-55K)
ruditapes_lrc36799	signal transduction	signal transduction	P	Angiopoietin-related protein 7 (Angiopoietin-like factor) (Angiopoietin-like protein 7) (Cornea-derived transcript 6 protein)
ruditapes_lrc36550	response to oxidative stress	stress response	P	Angiopoietin-related protein 7 (Angiopoietin-like factor) (Angiopoietin-like protein 7) (Cornea-derived transcript 6 protein)
ruditapes_lrc36799	response to oxidative stress	stress response	P	Angiopoietin-related protein 7 (Angiopoietin-like factor) (Angiopoietin-like protein 7) (Cornea-derived transcript 6 protein)
ruditapes_lrc36550	signal transduction	signal transduction	P	Angiopoietin-related protein 7 (Angiopoietin-like factor) (Angiopoietin-like protein 7) (Cornea-derived transcript 6 protein)
ruditapes_c21358	cell proliferation	cell cycle and proliferation	P	Nardilysin (EC 3.4.24.61) (N-arginine dibasic convertase) (NRD convertase) (NRD-C)
ruditapes_c21358	regulation of endopeptidase activity	other biological processes	P	Nardilysin (EC 3.4.24.61) (N-arginine dibasic convertase) (NRD convertase) (NRD-C)
ruditapes_c21358	neuromuscular junction development	developmental processes	P	Nardilysin (EC 3.4.24.61) (N-arginine dibasic convertase) (NRD convertase) (NRD-C)
ruditapes_c21358	proteolysis	protein metabolism	P	Nardilysin (EC 3.4.24.61) (N-arginine dibasic convertase) (NRD convertase) (NRD-C)
ruditapes_c21358	cell migration	other biological processes	P	Nardilysin (EC 3.4.24.61) (N-arginine dibasic convertase) (NRD convertase) (NRD-C)
ruditapes_c21358	positive regulation of membrane protein ectodomain proteolysis	protein metabolism	P	Nardilysin (EC 3.4.24.61) (N-arginine dibasic convertase) (NRD convertase) (NRD-C)
ruditapes_c21358	neuromuscular junction development	cell organization and biogenesis	P	Nardilysin (EC 3.4.24.61) (N-arginine dibasic convertase) (NRD convertase) (NRD-C)
ruditapes_c21473	proton transport	transport	P	V-type proton ATPase subunit F 1 (V-ATPase subunit F 1) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F 1)
ruditapes_c21473	ion transport	transport	P	V-type proton ATPase subunit F 1 (V-ATPase subunit F 1) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F 1)
ruditapes_c21473	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit F 1 (V-ATPase subunit F 1) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F 1)
ruditapes_c21473	transport	transport	P	V-type proton ATPase subunit F 1 (V-ATPase subunit F 1) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F 1)
ruditapes2_c4004	embryonic development ending in birth or egg hatching	developmental processes	P	Probable nucleolar GTP-binding protein 1
ruditapes2_c4004	ribosome biogenesis	other biological processes	P	Probable nucleolar GTP-binding protein 1
ruditapes2_c4004	positive regulation of growth rate	other biological processes	P	Probable nucleolar GTP-binding protein 1
ruditapes2_c4004	locomotion	other biological processes	P	Probable nucleolar GTP-binding protein 1
ruditapes2_c4004	reproduction	other biological processes	P	Probable nucleolar GTP-binding protein 1
ruditapes2_c4004	growth	other biological processes	P	Probable nucleolar GTP-binding protein 1
ruditapes2_c4004	nematode larval development	developmental processes	P	Probable nucleolar GTP-binding protein 1
ruditapes_c2307	central nervous system development	developmental processes	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	pole plasm oskar mRNA localization	developmental processes	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	pole plasm oskar mRNA localization	cell organization and biogenesis	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	mitotic spindle organization	cell organization and biogenesis	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	peripheral nervous system development	developmental processes	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	mitosis	cell cycle and proliferation	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	mitosis	cell organization and biogenesis	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	neuron differentiation	developmental processes	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	muscle organ development	developmental processes	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	lymph gland development	developmental processes	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_c2307	mitotic spindle organization	cell cycle and proliferation	P	Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
ruditapes_s34797	negative regulation of ATPase activity	other biological processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_s34797	negative regulation of catalytic activity	other biological processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes_s34797	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor mai-2, mitochondrial"
ruditapes2_c2398	tail tip morphogenesis	other biological processes	P	Plexin-2
ruditapes2_c2398	signal transduction	signal transduction	P	Plexin-2
ruditapes2_c2398	embryonic development ending in birth or egg hatching	developmental processes	P	Plexin-2
ruditapes2_c2398	nematode larval development	developmental processes	P	Plexin-2
ruditapes2_c2398	multicellular organismal development	developmental processes	P	Plexin-2
ruditapes2_c2398	cell differentiation	other biological processes	P	Plexin-2
ruditapes_c22068	"phagocytosis, engulfment"	transport	P	Vinculin
ruditapes_c22068	"phagocytosis, engulfment"	cell organization and biogenesis	P	Vinculin
ruditapes_c22068	cell adhesion	cell adhesion	P	Vinculin
ruditapes_c21139	oxidation reduction	other metabolic processes	P	Ferritin heavy chain (EC 1.16.3.1)
ruditapes_c21139	cellular iron ion homeostasis	other biological processes	P	Ferritin heavy chain (EC 1.16.3.1)
ruditapes_lrc23533	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes_lrc34349	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes_lrc33516	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes_lrc34235	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes2_lrc4938	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes_lrc13269	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes_s37029	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes2_lrc5177	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes2_lrc5155	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes_lrc38099	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes_lrc34472	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes_lrc32429	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes_lrc35917	translation	protein metabolism	P	60S ribosomal protein L14
ruditapes_c7610	specification of organ identity	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	salivary gland boundary specification	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	proximal/distal pattern formation	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	haltere morphogenesis	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	brain development	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	segmentation	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	imaginal disc-derived wing morphogenesis	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	"specification of segmental identity, antennal segment"	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	"specification of segmental identity, head"	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	peripheral nervous system development	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	compound eye photoreceptor fate commitment	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	leg disc proximal/distal pattern formation	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	compound eye development	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	imaginal disc-derived leg morphogenesis	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	multicellular organismal development	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	eye development	developmental processes	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c7610	"protein import into nucleus, translocation"	transport	P	Homeobox protein homothorax (Homeobox protein dorsotonals)
ruditapes_c22111	DNA metabolic process	DNA metabolism	P	"DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA topoisomerase II, alpha isozyme)"
ruditapes_c22111	DNA topological change	DNA metabolism	P	"DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA topoisomerase II, alpha isozyme)"
ruditapes2_c5209	bile acid biosynthetic process	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes_c31973	cholesterol metabolic process	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes_c31973	lipid metabolic process	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes2_c5209	steroid metabolic process	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes_c31973	cholesterol catabolic process	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes_c31973	bile acid biosynthetic process	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes2_c5209	oxidation reduction	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes2_c5209	cholesterol catabolic process	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes_c31973	cholesterol homeostasis	other biological processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes2_c5209	lipid metabolic process	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes_c31973	oxidation reduction	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes_c31973	steroid metabolic process	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes2_c5209	cholesterol homeostasis	other biological processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes2_c5209	cholesterol metabolic process	other metabolic processes	P	Cholesterol 7-alpha-monooxygenase (EC 1.14.13.17) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cytochrome P450 7A1)
ruditapes2_c1651	metabolic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes2_c1651	cholesterol homeostasis	other biological processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes2_c1651	very-low-density lipoprotein particle remodeling	cell organization and biogenesis	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes2_c1651	cholesterol transport	transport	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes2_c1651	high-density lipoprotein particle remodeling	cell organization and biogenesis	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes2_c1651	lipid catabolic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes2_c1651	low-density lipoprotein particle remodeling	cell organization and biogenesis	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes2_c1651	fatty acid biosynthetic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes2_c1651	cholesterol metabolic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes2_c1651	triglyceride homeostasis	other biological processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes2_c1651	triglyceride catabolic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes2_c1651	lipid metabolic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c23757	phosphoinositide 3-kinase cascade	signal transduction	P	5-hydroxytryptamine receptor 2A (5-HT-2) (5-HT-2A) (5-hydroxytryptamine receptor) (Serotonin receptor 2A)
ruditapes_c23757	signal transduction	signal transduction	P	5-hydroxytryptamine receptor 2A (5-HT-2) (5-HT-2A) (5-hydroxytryptamine receptor) (Serotonin receptor 2A)
ruditapes_c23757	phosphatidylinositol biosynthetic process	other metabolic processes	P	5-hydroxytryptamine receptor 2A (5-HT-2) (5-HT-2A) (5-hydroxytryptamine receptor) (Serotonin receptor 2A)
ruditapes_c23757	G-protein coupled receptor protein signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 2A (5-HT-2) (5-HT-2A) (5-hydroxytryptamine receptor) (Serotonin receptor 2A)
ruditapes_c23757	ERK1 and ERK2 cascade	signal transduction	P	5-hydroxytryptamine receptor 2A (5-HT-2) (5-HT-2A) (5-hydroxytryptamine receptor) (Serotonin receptor 2A)
ruditapes_c23757	release of sequestered calcium ion into cytosol	transport	P	5-hydroxytryptamine receptor 2A (5-HT-2) (5-HT-2A) (5-hydroxytryptamine receptor) (Serotonin receptor 2A)
ruditapes_c23757	response to drug	other biological processes	P	5-hydroxytryptamine receptor 2A (5-HT-2) (5-HT-2A) (5-hydroxytryptamine receptor) (Serotonin receptor 2A)
ruditapes_c23757	serotonin receptor signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 2A (5-HT-2) (5-HT-2A) (5-hydroxytryptamine receptor) (Serotonin receptor 2A)
ruditapes_c23032	regulation of transmembrane ion transport	transport	P	Sodium channel protein type 10 subunit alpha (NaNG) (Sodium channel protein type X subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.8)
ruditapes_c23032	transport	transport	P	Sodium channel protein type 10 subunit alpha (NaNG) (Sodium channel protein type X subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.8)
ruditapes_c23032	transmembrane transport	transport	P	Sodium channel protein type 10 subunit alpha (NaNG) (Sodium channel protein type X subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.8)
ruditapes_c23032	ion transport	transport	P	Sodium channel protein type 10 subunit alpha (NaNG) (Sodium channel protein type X subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.8)
ruditapes_c23032	sodium ion transport	transport	P	Sodium channel protein type 10 subunit alpha (NaNG) (Sodium channel protein type X subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.8)
ruditapes_c26170	metabolic process	other metabolic processes	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (SERCA2) (SR Ca(2+)-ATPase 2) (EC 3.6.3.8) (Calcium pump 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_c26170	ion transport	transport	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (SERCA2) (SR Ca(2+)-ATPase 2) (EC 3.6.3.8) (Calcium pump 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_c26170	ATP biosynthetic process	other metabolic processes	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (SERCA2) (SR Ca(2+)-ATPase 2) (EC 3.6.3.8) (Calcium pump 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_c26170	calcium ion transport	transport	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (SERCA2) (SR Ca(2+)-ATPase 2) (EC 3.6.3.8) (Calcium pump 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_c26170	transport	transport	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (SERCA2) (SR Ca(2+)-ATPase 2) (EC 3.6.3.8) (Calcium pump 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_c26170	cation transport	transport	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (SERCA2) (SR Ca(2+)-ATPase 2) (EC 3.6.3.8) (Calcium pump 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_c21656	translation	protein metabolism	P	"50S ribosomal protein L4, chloroplastic"
ruditapes_c18878	translation	protein metabolism	P	"50S ribosomal protein L4, chloroplastic"
ruditapes_c10962	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c10962	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c6926	transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c6926	ion transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c6926	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c6926	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c6926	proton transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c6926	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c27362	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c27362	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c27362	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_lrc6842	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_lrc6842	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_lrc6842	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c17256	abscisic acid mediated signaling	signal transduction	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c22054	abscisic acid mediated signaling	signal transduction	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c17256	oxidation reduction	other metabolic processes	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c17256	negative regulation of programmed cell death	death	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c22054	negative regulation of programmed cell death	death	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c17256	response to ethylene stimulus	other biological processes	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c22054	response to ethylene stimulus	other biological processes	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c22054	respiratory burst during defense response	stress response	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c22054	respiratory burst during defense response	other metabolic processes	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c17256	callose deposition during defense response	stress response	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c22054	defense response to fungus	stress response	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c22054	callose deposition during defense response	stress response	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c17256	defense response to fungus	stress response	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c17256	ethylene mediated signaling pathway	signal transduction	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c22054	ethylene mediated signaling pathway	signal transduction	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c17256	regulation of stomatal movement	other biological processes	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c22054	regulation of stomatal movement	other biological processes	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c17256	hydrogen peroxide biosynthetic process	other metabolic processes	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c22054	oxidation reduction	other metabolic processes	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c17256	respiratory burst during defense response	stress response	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c17256	respiratory burst during defense response	other metabolic processes	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c22054	hydrogen peroxide biosynthetic process	other metabolic processes	P	Respiratory burst oxidase homolog protein F (EC 1.11.1.-) (EC 1.6.3.-) (Cytochrome b245 beta chain homolog RbohAp108) (NADPH oxidase RBOHF) (AtRBOHF)
ruditapes_c23960	hyperosmotic salinity response	stress response	P	Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.12) (Protein RADIALLY SWOLLEN 1) (AtRSW1)
ruditapes_c23960	cell wall organization	cell organization and biogenesis	P	Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.12) (Protein RADIALLY SWOLLEN 1) (AtRSW1)
ruditapes_c23960	primary cell wall biogenesis	other biological processes	P	Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.12) (Protein RADIALLY SWOLLEN 1) (AtRSW1)
ruditapes_c23960	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.12) (Protein RADIALLY SWOLLEN 1) (AtRSW1)
ruditapes_c31588	cell wall organization	cell organization and biogenesis	P	Cellulose synthase A catalytic subunit 2 [UDP-forming] (AtCesA2) (Ath-A) (EC 2.4.1.12)
ruditapes_c31588	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase A catalytic subunit 2 [UDP-forming] (AtCesA2) (Ath-A) (EC 2.4.1.12)
ruditapes_lrc33543	transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes2_c3418	transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes_lrc33832	purine nucleotide transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes_lrc34901	transmembrane transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes_lrc34901	purine nucleotide transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes2_c3418	transmembrane transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes_lrc33832	transmembrane transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes_lrc33543	transmembrane transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes2_c3418	purine nucleotide transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes_lrc33543	purine nucleotide transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes_lrc34901	transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes_lrc33832	transport	transport	P	"ADP,ATP carrier protein 3, mitochondrial (ADP/ATP translocase 3) (Adenine nucleotide translocator 3) (ANT 3)"
ruditapes_c22643	cell death	death	P	MLO-like protein 1 (AtMlo1) (MLO protein homolog 1) (AtMlo-H1)
ruditapes_c22643	defense response	stress response	P	MLO-like protein 1 (AtMlo1) (MLO protein homolog 1) (AtMlo-H1)
ruditapes_c22643	response to biotic stimulus	other biological processes	P	MLO-like protein 1 (AtMlo1) (MLO protein homolog 1) (AtMlo-H1)
ruditapes2_c313	oxidation reduction	other metabolic processes	P	Cytochrome P450 82A4 (EC 1.14.-.-) (Cytochrome P450 CP9)
ruditapes_c19975	translation	protein metabolism	P	"50S ribosomal protein L4, chloroplastic (CL4) (R-protein L4)"
ruditapes_c25372	DNA integration	DNA metabolism	P	Integrase/recombinase xerD homolog
ruditapes_c25372	DNA recombination	DNA metabolism	P	Integrase/recombinase xerD homolog
ruditapes_c8245	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c8245	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c31450	regulation of RNA elongation	RNA metabolism	P	Transcription elongation factor GreA (Transcript cleavage factor GreA)
ruditapes_c31450	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor GreA (Transcript cleavage factor GreA)
ruditapes_c31450	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor GreA (Transcript cleavage factor GreA)
ruditapes_c599	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes_c599	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes_c599	peptidoglycan-based cell wall biogenesis	other biological processes	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes_c599	cell division	other biological processes	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes_c599	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes_c599	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes_c599	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes_c8323	chemotaxis	other biological processes	P	Probable protein-glutamate methylesterase BB
ruditapes_c8323	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable protein-glutamate methylesterase BB
ruditapes_c8323	two-component signal transduction system (phosphorelay)	signal transduction	P	Probable protein-glutamate methylesterase BB
ruditapes2_c3043	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes2_c3043	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes2_c3043	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes2_c3043	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes2_c3043	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c13610	proteolysis	protein metabolism	P	Lon protease 2 (EC 3.4.21.53) (ATP-dependent protease La 2)
ruditapes_c13610	response to stress	stress response	P	Lon protease 2 (EC 3.4.21.53) (ATP-dependent protease La 2)
ruditapes_lrc7739	intracellular protein transport	transport	P	Protein translocase subunit SecF
ruditapes_lrc7739	protein transport	transport	P	Protein translocase subunit SecF
ruditapes_lrc7739	transport	transport	P	Protein translocase subunit SecF
ruditapes_c10317	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c10317	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c10317	DNA replication	DNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c10317	"transcription, DNA-dependent"	RNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c18657	NAD biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes_c18657	biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes_c18657	pyridine nucleotide biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes_s39745	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_s39745	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_s39745	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c26151	tRNA modification	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c26151	GTP catabolic process	other metabolic processes	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c26151	tRNA processing	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c20796	transport	transport	P	Enterochelin esterase (Ferric enterobactin esterase)
ruditapes_c7215	iron ion homeostasis	other biological processes	P	Enterochelin esterase (Ferric enterobactin esterase)
ruditapes_c7215	ion transport	transport	P	Enterochelin esterase (Ferric enterobactin esterase)
ruditapes_c7215	transport	transport	P	Enterochelin esterase (Ferric enterobactin esterase)
ruditapes_c20796	iron ion homeostasis	other biological processes	P	Enterochelin esterase (Ferric enterobactin esterase)
ruditapes_c7215	iron ion transport	transport	P	Enterochelin esterase (Ferric enterobactin esterase)
ruditapes_c20796	ion transport	transport	P	Enterochelin esterase (Ferric enterobactin esterase)
ruditapes_c20796	iron ion transport	transport	P	Enterochelin esterase (Ferric enterobactin esterase)
ruditapes_c17236	oxidation reduction	other metabolic processes	P	"Salicylate 5-hydroxylase, large oxygenase component (S5H large oxygenase component) (EC 1.14.13.-) (Salicylate 5-hydroxylase, oxygenase component NagG) (Salicylate 5-monooxygenase, hydroxylase large subunit)"
ruditapes_c17236	cellular aromatic compound metabolic process	other metabolic processes	P	"Salicylate 5-hydroxylase, large oxygenase component (S5H large oxygenase component) (EC 1.14.13.-) (Salicylate 5-hydroxylase, oxygenase component NagG) (Salicylate 5-monooxygenase, hydroxylase large subunit)"
ruditapes_c17236	aromatic compound catabolic process	other metabolic processes	P	"Salicylate 5-hydroxylase, large oxygenase component (S5H large oxygenase component) (EC 1.14.13.-) (Salicylate 5-hydroxylase, oxygenase component NagG) (Salicylate 5-monooxygenase, hydroxylase large subunit)"
ruditapes_c23792	transport	transport	P	Arginine/ornithine antiporter
ruditapes_c23792	arginine catabolic process	other metabolic processes	P	Arginine/ornithine antiporter
ruditapes_c23792	amino acid transport	transport	P	Arginine/ornithine antiporter
ruditapes_c27909	response to acid	other biological processes	P	Long-chain-fatty-acid--CoA ligase FadD13 (EC 6.2.1.3) (Fatty acyl-CoA ligase) (FACL) (FACL13) (Fatty acyl-CoA synthetase) (ACS) (FACS) (Very-long-chain fatty-acyl-CoA synthetase) (ACSVL)
ruditapes_c27909	metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase FadD13 (EC 6.2.1.3) (Fatty acyl-CoA ligase) (FACL) (FACL13) (Fatty acyl-CoA synthetase) (ACS) (FACS) (Very-long-chain fatty-acyl-CoA synthetase) (ACSVL)
ruditapes_c26259	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 2 (FBPase class 2) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 2)"
ruditapes_c26259	glycerol metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 2 (FBPase class 2) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 2)"
ruditapes_c26259	gluconeogenesis	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 2 (FBPase class 2) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 2)"
ruditapes_c14158	response to antibiotic	other biological processes	P	Uncharacterized protein Rv2030c/MT2089
ruditapes_c14158	nucleoside metabolic process	other metabolic processes	P	Uncharacterized protein Rv2030c/MT2089
ruditapes_lrc33058	cell division	other biological processes	P	ESX-3 secretion system protein EccC3 (ESX conserved component C3) (Type VII secretion system protein EccC3) (T7SS protein EccC3)
ruditapes_lrc33058	growth	other biological processes	P	ESX-3 secretion system protein EccC3 (ESX conserved component C3) (Type VII secretion system protein EccC3) (T7SS protein EccC3)
ruditapes_lrc33058	chromosome segregation	other biological processes	P	ESX-3 secretion system protein EccC3 (ESX conserved component C3) (Type VII secretion system protein EccC3) (T7SS protein EccC3)
ruditapes_lrc33058	cell cycle	cell cycle and proliferation	P	ESX-3 secretion system protein EccC3 (ESX conserved component C3) (Type VII secretion system protein EccC3) (T7SS protein EccC3)
ruditapes_c25390	DNA replication	DNA metabolism	P	Vitamin B12-dependent ribonucleotide reductase (EC 1.17.4.1) (Ribonucleoside-diphosphate reductase NrdJ)
ruditapes_c25390	oxidation reduction	other metabolic processes	P	Vitamin B12-dependent ribonucleotide reductase (EC 1.17.4.1) (Ribonucleoside-diphosphate reductase NrdJ)
ruditapes_c23637	DNA replication	DNA metabolism	P	DNA polymerase III subunit beta (EC 2.7.7.7)
ruditapes_c28617	DNA metabolic process	DNA metabolism	P	DNA topoisomerase 4 subunit A (EC 5.99.1.3) (Topoisomerase IV subunit A)
ruditapes_c28617	DNA topological change	DNA metabolism	P	DNA topoisomerase 4 subunit A (EC 5.99.1.3) (Topoisomerase IV subunit A)
ruditapes_c7696	lactation	developmental processes	P	"Equilibrative nucleoside transporter 1 (Equilibrative nitrobenzylmercaptopurine riboside-sensitive nucleoside transporter) (Equilibrative NBMPR-sensitive nucleoside transporter) (Nucleoside transporter, es-type) (Solute carrier family 29 member 1)"
ruditapes_c7696	transmembrane transport	transport	P	"Equilibrative nucleoside transporter 1 (Equilibrative nitrobenzylmercaptopurine riboside-sensitive nucleoside transporter) (Equilibrative NBMPR-sensitive nucleoside transporter) (Nucleoside transporter, es-type) (Solute carrier family 29 member 1)"
ruditapes_c7696	regulation of excitatory postsynaptic membrane potential	cell-cell signaling	P	"Equilibrative nucleoside transporter 1 (Equilibrative nitrobenzylmercaptopurine riboside-sensitive nucleoside transporter) (Equilibrative NBMPR-sensitive nucleoside transporter) (Nucleoside transporter, es-type) (Solute carrier family 29 member 1)"
ruditapes_c7696	transport	transport	P	"Equilibrative nucleoside transporter 1 (Equilibrative nitrobenzylmercaptopurine riboside-sensitive nucleoside transporter) (Equilibrative NBMPR-sensitive nucleoside transporter) (Nucleoside transporter, es-type) (Solute carrier family 29 member 1)"
ruditapes_c7696	nucleoside transport	transport	P	"Equilibrative nucleoside transporter 1 (Equilibrative nitrobenzylmercaptopurine riboside-sensitive nucleoside transporter) (Equilibrative NBMPR-sensitive nucleoside transporter) (Nucleoside transporter, es-type) (Solute carrier family 29 member 1)"
ruditapes_c7696	sleep	other biological processes	P	"Equilibrative nucleoside transporter 1 (Equilibrative nitrobenzylmercaptopurine riboside-sensitive nucleoside transporter) (Equilibrative NBMPR-sensitive nucleoside transporter) (Nucleoside transporter, es-type) (Solute carrier family 29 member 1)"
ruditapes_c7696	uridine transport	transport	P	"Equilibrative nucleoside transporter 1 (Equilibrative nitrobenzylmercaptopurine riboside-sensitive nucleoside transporter) (Equilibrative NBMPR-sensitive nucleoside transporter) (Nucleoside transporter, es-type) (Solute carrier family 29 member 1)"
ruditapes_c9699	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c9699	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c9699	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c9699	androgen metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c9699	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c22071	mannose metabolic process	other metabolic processes	P	Epididymis-specific alpha-mannosidase (EC 3.2.1.24) (Mannosidase alpha class 2B member 2)
ruditapes_c22071	metabolic process	other metabolic processes	P	Epididymis-specific alpha-mannosidase (EC 3.2.1.24) (Mannosidase alpha class 2B member 2)
ruditapes_c22071	carbohydrate metabolic process	other metabolic processes	P	Epididymis-specific alpha-mannosidase (EC 3.2.1.24) (Mannosidase alpha class 2B member 2)
ruditapes_lrc17086	apoptosis	death	P	DNA fragmentation factor subunit beta (EC 3.-.-.-) (Caspase-activated deoxyribonuclease) (CAD) (Caspase-activated DNase) (DNA fragmentation factor 40 kDa subunit) (DFF-40)
ruditapes_lrc17086	induction of apoptosis	death	P	DNA fragmentation factor subunit beta (EC 3.-.-.-) (Caspase-activated deoxyribonuclease) (CAD) (Caspase-activated DNase) (DNA fragmentation factor 40 kDa subunit) (DFF-40)
ruditapes_lrc17086	apoptotic chromosome condensation	cell organization and biogenesis	P	DNA fragmentation factor subunit beta (EC 3.-.-.-) (Caspase-activated deoxyribonuclease) (CAD) (Caspase-activated DNase) (DNA fragmentation factor 40 kDa subunit) (DFF-40)
ruditapes_lrc17086	apoptotic chromosome condensation	death	P	DNA fragmentation factor subunit beta (EC 3.-.-.-) (Caspase-activated deoxyribonuclease) (CAD) (Caspase-activated DNase) (DNA fragmentation factor 40 kDa subunit) (DFF-40)
ruditapes_lrc17086	DNA fragmentation involved in apoptosis	DNA metabolism	P	DNA fragmentation factor subunit beta (EC 3.-.-.-) (Caspase-activated deoxyribonuclease) (CAD) (Caspase-activated DNase) (DNA fragmentation factor 40 kDa subunit) (DFF-40)
ruditapes_lrc17086	DNA fragmentation involved in apoptosis	cell organization and biogenesis	P	DNA fragmentation factor subunit beta (EC 3.-.-.-) (Caspase-activated deoxyribonuclease) (CAD) (Caspase-activated DNase) (DNA fragmentation factor 40 kDa subunit) (DFF-40)
ruditapes_lrc17086	DNA fragmentation involved in apoptosis	death	P	DNA fragmentation factor subunit beta (EC 3.-.-.-) (Caspase-activated deoxyribonuclease) (CAD) (Caspase-activated DNase) (DNA fragmentation factor 40 kDa subunit) (DFF-40)
ruditapes_c875	acute inflammatory response	stress response	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c6298	response to toxin	other biological processes	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c6298	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	signal transduction	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c6298	acute inflammatory response	stress response	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes_c875	positive regulation of apoptosis	death	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c3801	positive regulation of apoptosis	death	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c3801	response to toxin	other biological processes	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes_c875	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c6298	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c3801	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c3801	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	signal transduction	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c3801	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	stress response	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c3801	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	death	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c6298	positive regulation of apoptosis	death	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes_c875	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	signal transduction	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes_c875	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	stress response	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes_c875	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	death	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c6298	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	stress response	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c6298	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	death	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes2_c3801	acute inflammatory response	stress response	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes_c875	response to toxin	other biological processes	P	Nuclear protein 1 (Candidate of metastasis 1) (Protein p8)
ruditapes_c6905	rRNA transcription	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (A127) (RPA135)
ruditapes_c6905	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (A127) (RPA135)
ruditapes_c7230	calcium ion transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage-gated calcium channel subunit alpha Cav3.1)
ruditapes_c7230	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage-gated calcium channel subunit alpha Cav3.1)
ruditapes_c7230	artery smooth muscle contraction	other biological processes	P	Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage-gated calcium channel subunit alpha Cav3.1)
ruditapes_c7230	positive regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage-gated calcium channel subunit alpha Cav3.1)
ruditapes_c7230	elevation of cytosolic calcium ion concentration	other biological processes	P	Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage-gated calcium channel subunit alpha Cav3.1)
ruditapes_c7230	transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage-gated calcium channel subunit alpha Cav3.1)
ruditapes_c7230	ion transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage-gated calcium channel subunit alpha Cav3.1)
ruditapes_c7230	regulation of transmembrane ion transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage-gated calcium channel subunit alpha Cav3.1)
ruditapes_c7230	positive regulation of calcium ion-dependent exocytosis	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage-gated calcium channel subunit alpha Cav3.1)
ruditapes_c7230	transmembrane calcium ion transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage-gated calcium channel subunit alpha Cav3.1)
ruditapes_c7230	transmembrane transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage-gated calcium channel subunit alpha Cav3.1)
ruditapes_c8800	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NF-kappa-B inhibitor epsilon (NF-kappa-BIE) (I-kappa-B-epsilon) (IkB-E) (IkB-epsilon) (IkappaBepsilon)
ruditapes_c8800	D-serine transport	transport	P	NF-kappa-B inhibitor epsilon (NF-kappa-BIE) (I-kappa-B-epsilon) (IkB-E) (IkB-epsilon) (IkappaBepsilon)
ruditapes_c10502	transmembrane calcium ion transport	transport	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	negative regulation of neuron differentiation	developmental processes	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	negative regulation of cell proliferation	cell cycle and proliferation	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	negative regulation of gene expression	other metabolic processes	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	cardiac muscle cell myoblast differentiation	developmental processes	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	positive regulation of caspase activity	death	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	negative regulation of insulin secretion	transport	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	negative regulation of insulin secretion	cell-cell signaling	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	negative regulation of calcium ion-dependent exocytosis	transport	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	"transcription, DNA-dependent"	RNA metabolism	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	negative regulation of neurogenesis	developmental processes	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	negative regulation of aldosterone biosynthetic process	other metabolic processes	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	positive regulation of apoptosis	death	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c10502	negative regulation by host of viral transcription	RNA metabolism	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes2_c6484	regulation of transmembrane ion transport	transport	P	"Potassium channel subfamily U member 1 (Calcium-activated potassium channel subunit alpha-3) (Calcium-activated potassium channel, subfamily M subunit alpha-3) (Slowpoke homolog 3) (mSlo3) (pH-sensitive maxi potassium channel)"
ruditapes2_c6484	ion transport	transport	P	"Potassium channel subfamily U member 1 (Calcium-activated potassium channel subunit alpha-3) (Calcium-activated potassium channel, subfamily M subunit alpha-3) (Slowpoke homolog 3) (mSlo3) (pH-sensitive maxi potassium channel)"
ruditapes2_c4732	transport	transport	P	"Potassium channel subfamily U member 1 (Calcium-activated potassium channel subunit alpha-3) (Calcium-activated potassium channel, subfamily M subunit alpha-3) (Slowpoke homolog 3) (mSlo3) (pH-sensitive maxi potassium channel)"
ruditapes2_c6484	potassium ion transport	transport	P	"Potassium channel subfamily U member 1 (Calcium-activated potassium channel subunit alpha-3) (Calcium-activated potassium channel, subfamily M subunit alpha-3) (Slowpoke homolog 3) (mSlo3) (pH-sensitive maxi potassium channel)"
ruditapes2_c4732	ion transport	transport	P	"Potassium channel subfamily U member 1 (Calcium-activated potassium channel subunit alpha-3) (Calcium-activated potassium channel, subfamily M subunit alpha-3) (Slowpoke homolog 3) (mSlo3) (pH-sensitive maxi potassium channel)"
ruditapes2_c4732	transmembrane transport	transport	P	"Potassium channel subfamily U member 1 (Calcium-activated potassium channel subunit alpha-3) (Calcium-activated potassium channel, subfamily M subunit alpha-3) (Slowpoke homolog 3) (mSlo3) (pH-sensitive maxi potassium channel)"
ruditapes2_c6484	transport	transport	P	"Potassium channel subfamily U member 1 (Calcium-activated potassium channel subunit alpha-3) (Calcium-activated potassium channel, subfamily M subunit alpha-3) (Slowpoke homolog 3) (mSlo3) (pH-sensitive maxi potassium channel)"
ruditapes2_c4732	potassium ion transport	transport	P	"Potassium channel subfamily U member 1 (Calcium-activated potassium channel subunit alpha-3) (Calcium-activated potassium channel, subfamily M subunit alpha-3) (Slowpoke homolog 3) (mSlo3) (pH-sensitive maxi potassium channel)"
ruditapes2_c4732	regulation of transmembrane ion transport	transport	P	"Potassium channel subfamily U member 1 (Calcium-activated potassium channel subunit alpha-3) (Calcium-activated potassium channel, subfamily M subunit alpha-3) (Slowpoke homolog 3) (mSlo3) (pH-sensitive maxi potassium channel)"
ruditapes2_c6484	transmembrane transport	transport	P	"Potassium channel subfamily U member 1 (Calcium-activated potassium channel subunit alpha-3) (Calcium-activated potassium channel, subfamily M subunit alpha-3) (Slowpoke homolog 3) (mSlo3) (pH-sensitive maxi potassium channel)"
ruditapes_c28942	camera-type eye photoreceptor cell differentiation	developmental processes	P	Prominin-1 (Antigen AC133 homolog) (Prominin-like protein 1) (CD antigen CD133)
ruditapes_lrc29982	retina layer formation	developmental processes	P	Prominin-1 (Antigen AC133 homolog) (Prominin-like protein 1) (CD antigen CD133)
ruditapes_lrc29982	camera-type eye photoreceptor cell differentiation	developmental processes	P	Prominin-1 (Antigen AC133 homolog) (Prominin-like protein 1) (CD antigen CD133)
ruditapes_c28942	retina layer formation	developmental processes	P	Prominin-1 (Antigen AC133 homolog) (Prominin-like protein 1) (CD antigen CD133)
ruditapes_c22333	regulation of chromatin assembly or disassembly	cell organization and biogenesis	P	Serine/threonine-protein kinase tousled-like 2 (EC 2.7.11.1) (PKU-alpha) (Tousled-like kinase 2)
ruditapes_c22333	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase tousled-like 2 (EC 2.7.11.1) (PKU-alpha) (Tousled-like kinase 2)
ruditapes_c22333	spermatogenesis	other biological processes	P	Serine/threonine-protein kinase tousled-like 2 (EC 2.7.11.1) (PKU-alpha) (Tousled-like kinase 2)
ruditapes_c22333	cell differentiation	other biological processes	P	Serine/threonine-protein kinase tousled-like 2 (EC 2.7.11.1) (PKU-alpha) (Tousled-like kinase 2)
ruditapes_c22333	chromatin modification	cell organization and biogenesis	P	Serine/threonine-protein kinase tousled-like 2 (EC 2.7.11.1) (PKU-alpha) (Tousled-like kinase 2)
ruditapes_c22333	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase tousled-like 2 (EC 2.7.11.1) (PKU-alpha) (Tousled-like kinase 2)
ruditapes_c22333	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase tousled-like 2 (EC 2.7.11.1) (PKU-alpha) (Tousled-like kinase 2)
ruditapes_c22333	multicellular organismal development	developmental processes	P	Serine/threonine-protein kinase tousled-like 2 (EC 2.7.11.1) (PKU-alpha) (Tousled-like kinase 2)
ruditapes_c22333	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase tousled-like 2 (EC 2.7.11.1) (PKU-alpha) (Tousled-like kinase 2)
ruditapes_c21036	biological_process	other biological processes	P	Protein NipSnap homolog 1 (NipSnap1)
ruditapes_c26035	negative regulation of RNA elongation	RNA metabolism	P	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)
ruditapes_c26035	regulation of RNA elongation	RNA metabolism	P	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)
ruditapes_c26035	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)
ruditapes_c26035	RNA elongation	RNA metabolism	P	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)
ruditapes_c26035	RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)
ruditapes_c26035	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)
ruditapes_c26035	positive regulation of RNA elongation	RNA metabolism	P	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)
ruditapes_c26035	positive regulation of RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)
ruditapes_c26035	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)
ruditapes_c26035	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)
ruditapes_c26035	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)
ruditapes2_lrc5281	L-arabinose metabolic process	other metabolic processes	P	Otogelin
ruditapes2_lrc5281	blood coagulation	stress response	P	Otogelin
ruditapes_lrc34485	blood coagulation	stress response	P	Otogelin
ruditapes2_lrc5281	cell adhesion	cell adhesion	P	Otogelin
ruditapes_lrc34485	adult locomotory behavior	other biological processes	P	Otogelin
ruditapes_lrc34485	sensory perception of sound	other biological processes	P	Otogelin
ruditapes_lrc34485	cell adhesion	cell adhesion	P	Otogelin
ruditapes2_lrc5281	sensory perception of sound	other biological processes	P	Otogelin
ruditapes2_lrc5281	adult locomotory behavior	other biological processes	P	Otogelin
ruditapes_lrc34485	L-arabinose metabolic process	other metabolic processes	P	Otogelin
ruditapes_c850	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit beta type-5 (EC 3.4.25.1) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome chain 6) (Proteasome epsilon chain) (Proteasome subunit X)
ruditapes_c850	response to oxidative stress	stress response	P	Proteasome subunit beta type-5 (EC 3.4.25.1) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome chain 6) (Proteasome epsilon chain) (Proteasome subunit X)
ruditapes_c850	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-5 (EC 3.4.25.1) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome chain 6) (Proteasome epsilon chain) (Proteasome subunit X)
ruditapes_c850	proteolysis	protein metabolism	P	Proteasome subunit beta type-5 (EC 3.4.25.1) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome chain 6) (Proteasome epsilon chain) (Proteasome subunit X)
ruditapes_c23196	DNA replication	DNA metabolism	P	DNA terminal protein (Bellett protein) (pTP protein)
ruditapes_lrc32063	mRNA processing	RNA metabolism	P	mRNA-capping enzyme catalytic subunit (Virus termination factor large subunit) (VTF large subunit) (mRNA-capping enzyme 97 kDa subunit) (mRNA-capping enzyme D1 subunit) (mRNA-capping enzyme large subunit) [Includes: Polynucleotide 5'-triphosphatase (EC 3.1.3.33) (mRNA 5'-triphosphatase) (TPase); mRNA guanylyltransferase (EC 2.7.7.50) (GTP--RNA guanylyltransferase) (GTase); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) (mRNA cap methyltransferase)]
ruditapes_lrc32063	mRNA capping	RNA metabolism	P	mRNA-capping enzyme catalytic subunit (Virus termination factor large subunit) (VTF large subunit) (mRNA-capping enzyme 97 kDa subunit) (mRNA-capping enzyme D1 subunit) (mRNA-capping enzyme large subunit) [Includes: Polynucleotide 5'-triphosphatase (EC 3.1.3.33) (mRNA 5'-triphosphatase) (TPase); mRNA guanylyltransferase (EC 2.7.7.50) (GTP--RNA guanylyltransferase) (GTase); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) (mRNA cap methyltransferase)]
ruditapes_lrc32063	methylation	other metabolic processes	P	mRNA-capping enzyme catalytic subunit (Virus termination factor large subunit) (VTF large subunit) (mRNA-capping enzyme 97 kDa subunit) (mRNA-capping enzyme D1 subunit) (mRNA-capping enzyme large subunit) [Includes: Polynucleotide 5'-triphosphatase (EC 3.1.3.33) (mRNA 5'-triphosphatase) (TPase); mRNA guanylyltransferase (EC 2.7.7.50) (GTP--RNA guanylyltransferase) (GTase); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) (mRNA cap methyltransferase)]
ruditapes_lrc32063	metabolic process	other metabolic processes	P	mRNA-capping enzyme catalytic subunit (Virus termination factor large subunit) (VTF large subunit) (mRNA-capping enzyme 97 kDa subunit) (mRNA-capping enzyme D1 subunit) (mRNA-capping enzyme large subunit) [Includes: Polynucleotide 5'-triphosphatase (EC 3.1.3.33) (mRNA 5'-triphosphatase) (TPase); mRNA guanylyltransferase (EC 2.7.7.50) (GTP--RNA guanylyltransferase) (GTase); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) (mRNA cap methyltransferase)]
ruditapes_c19789	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-1 (C-HAIRY1) (Hairy and enhancer of split 1)
ruditapes_c19789	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-1 (C-HAIRY1) (Hairy and enhancer of split 1)
ruditapes_c6326	cell differentiation	other biological processes	P	Tolloid-like protein 2 (EC 3.4.24.-) (Metalloprotease xolloid) (Xenopus tolloid)
ruditapes2_c2239	proteolysis	protein metabolism	P	Tolloid-like protein 2 (EC 3.4.24.-) (Metalloprotease xolloid) (Xenopus tolloid)
ruditapes_c6326	multicellular organismal development	developmental processes	P	Tolloid-like protein 2 (EC 3.4.24.-) (Metalloprotease xolloid) (Xenopus tolloid)
ruditapes2_c2239	multicellular organismal development	developmental processes	P	Tolloid-like protein 2 (EC 3.4.24.-) (Metalloprotease xolloid) (Xenopus tolloid)
ruditapes_c5644	cell differentiation	other biological processes	P	Tolloid-like protein 2 (EC 3.4.24.-) (Metalloprotease xolloid) (Xenopus tolloid)
ruditapes_c6326	proteolysis	protein metabolism	P	Tolloid-like protein 2 (EC 3.4.24.-) (Metalloprotease xolloid) (Xenopus tolloid)
ruditapes_c5644	proteolysis	protein metabolism	P	Tolloid-like protein 2 (EC 3.4.24.-) (Metalloprotease xolloid) (Xenopus tolloid)
ruditapes_c5644	multicellular organismal development	developmental processes	P	Tolloid-like protein 2 (EC 3.4.24.-) (Metalloprotease xolloid) (Xenopus tolloid)
ruditapes2_c2239	cell differentiation	other biological processes	P	Tolloid-like protein 2 (EC 3.4.24.-) (Metalloprotease xolloid) (Xenopus tolloid)
ruditapes_c26371	protein deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.4.19.12) (41 kDa ubiquitin-specific protease) (Deubiquitinating enzyme 2) (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2)
ruditapes_c26371	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.4.19.12) (41 kDa ubiquitin-specific protease) (Deubiquitinating enzyme 2) (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2)
ruditapes_c26371	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.4.19.12) (41 kDa ubiquitin-specific protease) (Deubiquitinating enzyme 2) (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2)
ruditapes_c19445	oxidation reduction	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes_c19445	steroid biosynthetic process	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes_c20832	proteolysis	protein metabolism	P	Aminopeptidase N (EC 3.4.11.2) (Aminopeptidase Ey) (EC 3.4.11.20)
ruditapes_lrc38716	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a (Surfeit locus protein 3)
ruditapes_lrc39142	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a (Surfeit locus protein 3)
ruditapes2_lrc4736	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a (Surfeit locus protein 3)
ruditapes2_lrc3703	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a (Surfeit locus protein 3)
ruditapes2_lrc5444	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a (Surfeit locus protein 3)
ruditapes2_lrc5580	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a (Surfeit locus protein 3)
ruditapes2_lrc4396	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a (Surfeit locus protein 3)
ruditapes_lrc30156	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a (Surfeit locus protein 3)
ruditapes_lrc27827	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a (Surfeit locus protein 3)
ruditapes_lrc35961	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a (Surfeit locus protein 3)
ruditapes_lrc35880	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a (Surfeit locus protein 3)
ruditapes_c13217	ATP hydrolysis coupled proton transport	transport	P	V-type ATP synthase subunit F (V-ATPase subunit F)
ruditapes_c13217	transport	transport	P	V-type ATP synthase subunit F (V-ATPase subunit F)
ruditapes_c13217	ion transport	transport	P	V-type ATP synthase subunit F (V-ATPase subunit F)
ruditapes_c13217	proton transport	transport	P	V-type ATP synthase subunit F (V-ATPase subunit F)
ruditapes_c13217	ATP biosynthetic process	other metabolic processes	P	V-type ATP synthase subunit F (V-ATPase subunit F)
ruditapes_c10049	intein-mediated protein splicing	protein metabolism	P	Replication factor C small subunit (RFC small subunit) (Clamp loader small subunit) [Cleaved into: Pho RFC intein]
ruditapes_c10049	DNA repair	stress response	P	Replication factor C small subunit (RFC small subunit) (Clamp loader small subunit) [Cleaved into: Pho RFC intein]
ruditapes_c10049	DNA repair	DNA metabolism	P	Replication factor C small subunit (RFC small subunit) (Clamp loader small subunit) [Cleaved into: Pho RFC intein]
ruditapes_c10049	DNA replication	DNA metabolism	P	Replication factor C small subunit (RFC small subunit) (Clamp loader small subunit) [Cleaved into: Pho RFC intein]
ruditapes_c10049	DNA recombination	DNA metabolism	P	Replication factor C small subunit (RFC small subunit) (Clamp loader small subunit) [Cleaved into: Pho RFC intein]
ruditapes2_c233	cobalamin biosynthetic process	other metabolic processes	P	Probable cobalamin biosynthesis protein CobD
ruditapes_c27804	translation	protein metabolism	P	Putative translation initiation factor eIF-2B subunit 2-like (eIF-2B GDP-GTP exchange factor)
ruditapes_c27804	translational initiation	protein metabolism	P	Putative translation initiation factor eIF-2B subunit 2-like (eIF-2B GDP-GTP exchange factor)
ruditapes_c27804	cellular metabolic process	other metabolic processes	P	Putative translation initiation factor eIF-2B subunit 2-like (eIF-2B GDP-GTP exchange factor)
ruditapes_c3593	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	Aspartate aminotransferase (AspAT) (EC 2.6.1.1) (Transaminase A)
ruditapes_c3593	biosynthetic process	other metabolic processes	P	Aspartate aminotransferase (AspAT) (EC 2.6.1.1) (Transaminase A)
ruditapes2_c3421	DNA topological change	DNA metabolism	P	Reverse gyrase [Cleaved into: Pho r-Gyr intein] [Includes: Helicase (EC 3.6.4.12); Topoisomerase (EC 5.99.1.3)]
ruditapes2_c3421	intein-mediated protein splicing	protein metabolism	P	Reverse gyrase [Cleaved into: Pho r-Gyr intein] [Includes: Helicase (EC 3.6.4.12); Topoisomerase (EC 5.99.1.3)]
ruditapes_c23929	iron-sulfur cluster assembly	other metabolic processes	P	UPF0051 protein PH0883
ruditapes_c27720	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c27720	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c27720	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c27720	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c27720	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_s36296	phosphorylation	other metabolic processes	P	Hydroxyethylthiazole kinase (EC 2.7.1.50) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
ruditapes_s36296	thiamin biosynthetic process	other metabolic processes	P	Hydroxyethylthiazole kinase (EC 2.7.1.50) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
ruditapes_c13503	transport	transport	P	Uncharacterized ABC transporter extracellular-binding protein PH1214
ruditapes_c29406	methylation	other metabolic processes	P	"tRNA (guanine(26)-N(2))-dimethyltransferase (EC 2.1.1.216) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase)"
ruditapes_c29406	tRNA processing	RNA metabolism	P	"tRNA (guanine(26)-N(2))-dimethyltransferase (EC 2.1.1.216) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase)"
ruditapes_c11699	cellular response to stress	stress response	P	LisH domain-containing protein C29A3.03c
ruditapes_c11699	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	LisH domain-containing protein C29A3.03c
ruditapes_c11699	negative regulation of gluconeogenesis	other metabolic processes	P	LisH domain-containing protein C29A3.03c
ruditapes_lrc13054	cellular response to stress	stress response	P	Stress response protein bis1
ruditapes2_lrc3152	DNA replication-independent nucleosome assembly	cell organization and biogenesis	P	Putative nucleosome assembly protein C364.06
ruditapes2_lrc3152	protein import into nucleus	transport	P	Putative nucleosome assembly protein C364.06
ruditapes2_lrc3152	traversing start control point of mitotic cell cycle	cell cycle and proliferation	P	Putative nucleosome assembly protein C364.06
ruditapes2_lrc3152	nucleosome assembly	cell organization and biogenesis	P	Putative nucleosome assembly protein C364.06
ruditapes2_lrc3152	nucleosome disassembly	cell organization and biogenesis	P	Putative nucleosome assembly protein C364.06
ruditapes2_lrc3152	transcription from RNA polymerase II promoter	RNA metabolism	P	Putative nucleosome assembly protein C364.06
ruditapes2_c255	response to antibiotic	other biological processes	P	60S ribosomal protein L44 (60S ribosomal protein L41)
ruditapes2_c255	translation	protein metabolism	P	60S ribosomal protein L44 (60S ribosomal protein L41)
ruditapes2_c255	response to cycloheximide	other biological processes	P	60S ribosomal protein L44 (60S ribosomal protein L41)
ruditapes2_c3276	carbohydrate transport	transport	P	High-affinity hexose transporter ght4 (Hexose transporter 4)
ruditapes2_c3276	cellular response to stress	stress response	P	High-affinity hexose transporter ght4 (Hexose transporter 4)
ruditapes2_c3276	transport	transport	P	High-affinity hexose transporter ght4 (Hexose transporter 4)
ruditapes2_c3276	transmembrane transport	transport	P	High-affinity hexose transporter ght4 (Hexose transporter 4)
ruditapes_c3023	chromatin silencing at silent mating-type cassette	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	cellular protein localization	other biological processes	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	chromatin silencing at centromere	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	chromatin silencing at telomere	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	methylation	other metabolic processes	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	histone H3-K9 methylation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	donor selection	DNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	histone lysine methylation	protein metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	histone lysine methylation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	chromatin modification	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	heterochromatin formation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	sphingolipid biosynthetic process	other metabolic processes	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	chromatin silencing at rDNA	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	meiotic telomere clustering	cell cycle and proliferation	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	meiotic telomere clustering	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	histone H3-K9 methylation	protein metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	horsetail nuclear movement	cell cycle and proliferation	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	horsetail nuclear movement	transport	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	regulation of Ran protein signal transduction	signal transduction	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	attachment of spindle microtubules to kinetochore during mitosis	cell cycle and proliferation	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c3023	attachment of spindle microtubules to kinetochore during mitosis	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-9 specific (EC 2.1.1.43) (Cryptic loci regulator 4) (Histone H3-K9 methyltransferase) (H3-K9-HMTase) (Lysine N-methyltransferase 1)"
ruditapes_c28489	"cell wall 1,3-beta-glucan biosynthetic process"	other metabolic processes	P	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase subunit alpha) (FTase-alpha) (Ras proteins prenyltransferase subunit alpha) (Type I protein geranyl-geranyltransferase subunit alpha) (GGTase-I-alpha)
ruditapes_c28489	protein geranylgeranylation	protein metabolism	P	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase subunit alpha) (FTase-alpha) (Ras proteins prenyltransferase subunit alpha) (Type I protein geranyl-geranyltransferase subunit alpha) (GGTase-I-alpha)
ruditapes_c28489	protein prenylation	protein metabolism	P	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase subunit alpha) (FTase-alpha) (Ras proteins prenyltransferase subunit alpha) (Type I protein geranyl-geranyltransferase subunit alpha) (GGTase-I-alpha)
ruditapes_c28489	protein targeting to membrane	transport	P	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase subunit alpha) (FTase-alpha) (Ras proteins prenyltransferase subunit alpha) (Type I protein geranyl-geranyltransferase subunit alpha) (GGTase-I-alpha)
ruditapes_c13803	cellular amino acid biosynthetic process	other metabolic processes	P	Probable prephenate dehydrogenase [NADP(+)] (PRDH) (EC 1.3.1.13)
ruditapes_c13803	tyrosine biosynthetic process	other metabolic processes	P	Probable prephenate dehydrogenase [NADP(+)] (PRDH) (EC 1.3.1.13)
ruditapes_c13803	aromatic amino acid family biosynthetic process	other metabolic processes	P	Probable prephenate dehydrogenase [NADP(+)] (PRDH) (EC 1.3.1.13)
ruditapes_c13803	oxidation reduction	other metabolic processes	P	Probable prephenate dehydrogenase [NADP(+)] (PRDH) (EC 1.3.1.13)
ruditapes_c30896	ubiquitin-dependent protein catabolic process	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase 12 (EC 3.4.19.12) (Deubiquitinating enzyme 12) (Ubiquitin thioesterase 12) (Ubiquitin-specific-processing protease 12)
ruditapes_c30896	protein deubiquitination	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase 12 (EC 3.4.19.12) (Deubiquitinating enzyme 12) (Ubiquitin thioesterase 12) (Ubiquitin-specific-processing protease 12)
ruditapes_c30896	proteolysis	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase 12 (EC 3.4.19.12) (Deubiquitinating enzyme 12) (Ubiquitin thioesterase 12) (Ubiquitin-specific-processing protease 12)
ruditapes_c15552	biological_process	other biological processes	P	SRR1-like protein
ruditapes_c4785	transcription of nuclear rRNA large RNA polymerase I transcript	RNA metabolism	P	DNA polymerase V (POL V) (EC 2.7.7.7)
ruditapes_c4785	"transcription, DNA-dependent"	RNA metabolism	P	DNA polymerase V (POL V) (EC 2.7.7.7)
ruditapes_c4785	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase V (POL V) (EC 2.7.7.7)
ruditapes_c4785	rRNA transcription	RNA metabolism	P	DNA polymerase V (POL V) (EC 2.7.7.7)
ruditapes_c14813	lipid catabolic process	other metabolic processes	P	Probable lipase C14C8.15 (EC 3.1.1.-)
ruditapes_c14813	ergosterol biosynthetic process	other metabolic processes	P	Probable lipase C14C8.15 (EC 3.1.1.-)
ruditapes_c14813	lipid metabolic process	other metabolic processes	P	Probable lipase C14C8.15 (EC 3.1.1.-)
ruditapes_c22412	protein folding	protein metabolism	P	BAG family molecular chaperone regulator 1A (BAG-1A)
ruditapes_c21836	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase ubr1 (EC 6.3.2.-) (N-end-recognizing protein) (N-recognin-1)
ruditapes_c21836	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase ubr1 (EC 6.3.2.-) (N-end-recognizing protein) (N-recognin-1)
ruditapes_c21836	proteasome localization	other biological processes	P	E3 ubiquitin-protein ligase ubr1 (EC 6.3.2.-) (N-end-recognizing protein) (N-recognin-1)
ruditapes_c21836	regulation of filamentous growth	other biological processes	P	E3 ubiquitin-protein ligase ubr1 (EC 6.3.2.-) (N-end-recognizing protein) (N-recognin-1)
ruditapes_c17370	RNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 6 (U3 snoRNA-associated protein 6)
ruditapes_c17370	maturation of SSU-rRNA	RNA metabolism	P	U3 small nucleolar RNA-associated protein 6 (U3 snoRNA-associated protein 6)
ruditapes_c17370	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 6 (U3 snoRNA-associated protein 6)
ruditapes_c17370	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 6 (U3 snoRNA-associated protein 6)
ruditapes_c28209	cell cycle	cell cycle and proliferation	P	Sjoegren syndrome/scleroderma autoantigen 1 (Autoantigen p27)
ruditapes_c28209	mitosis	cell cycle and proliferation	P	Sjoegren syndrome/scleroderma autoantigen 1 (Autoantigen p27)
ruditapes_c28209	mitosis	cell organization and biogenesis	P	Sjoegren syndrome/scleroderma autoantigen 1 (Autoantigen p27)
ruditapes_c28209	cell division	other biological processes	P	Sjoegren syndrome/scleroderma autoantigen 1 (Autoantigen p27)
ruditapes_c31011	homophilic cell adhesion	cell adhesion	P	Protocadherin-7 (Brain-heart protocadherin) (BH-Pcdh)
ruditapes_c31011	cell adhesion	cell adhesion	P	Protocadherin-7 (Brain-heart protocadherin) (BH-Pcdh)
ruditapes_s38065	signal transduction	signal transduction	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7
ruditapes_s38065	regulation of G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7
ruditapes_s38065	synaptic transmission	cell-cell signaling	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7
ruditapes_s38065	receptor guanylyl cyclase signaling pathway	signal transduction	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7
ruditapes_s38065	energy reserve metabolic process	other metabolic processes	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7
ruditapes_s38065	behavioral fear response	stress response	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7
ruditapes_s38065	locomotory behavior	other biological processes	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7
ruditapes_s38065	regulation of adenylate cyclase activity	other metabolic processes	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7
ruditapes_s38065	G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7
ruditapes_c17758	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 862
ruditapes_c9743	biological_process	other biological processes	P	Zinc finger protein 862
ruditapes_c9743	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 862
ruditapes_c18903	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 862
ruditapes_c17758	biological_process	other biological processes	P	Zinc finger protein 862
ruditapes2_c3011	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 862
ruditapes2_c3011	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 862
ruditapes_c9743	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 862
ruditapes_c18903	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 862
ruditapes_c18903	biological_process	other biological processes	P	Zinc finger protein 862
ruditapes_c17758	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 862
ruditapes2_c3011	biological_process	other biological processes	P	Zinc finger protein 862
ruditapes_c87	RNA processing	RNA metabolism	P	Zinc finger C3H1 domain-containing protein (Coiled-coil domain-containing protein 131) (Proline/serine-rich coiled-coil protein 2)
ruditapes_c22440	transmembrane transport	transport	P	Probable phospholipid-transporting ATPase VA (EC 3.6.3.1) (ATPase class V type 10A) (Aminophospholipid translocase VA)
ruditapes_c22440	phospholipid translocation	transport	P	Probable phospholipid-transporting ATPase VA (EC 3.6.3.1) (ATPase class V type 10A) (Aminophospholipid translocase VA)
ruditapes_c22440	phospholipid translocation	cell organization and biogenesis	P	Probable phospholipid-transporting ATPase VA (EC 3.6.3.1) (ATPase class V type 10A) (Aminophospholipid translocase VA)
ruditapes_c22440	cation transport	transport	P	Probable phospholipid-transporting ATPase VA (EC 3.6.3.1) (ATPase class V type 10A) (Aminophospholipid translocase VA)
ruditapes_c22440	phospholipid transport	transport	P	Probable phospholipid-transporting ATPase VA (EC 3.6.3.1) (ATPase class V type 10A) (Aminophospholipid translocase VA)
ruditapes_c22440	regulation of cell shape	cell organization and biogenesis	P	Probable phospholipid-transporting ATPase VA (EC 3.6.3.1) (ATPase class V type 10A) (Aminophospholipid translocase VA)
ruditapes_c22440	transmembrane ion transport	transport	P	Probable phospholipid-transporting ATPase VA (EC 3.6.3.1) (ATPase class V type 10A) (Aminophospholipid translocase VA)
ruditapes_c29883	histone demethylation	protein metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	histone demethylation	cell organization and biogenesis	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	negative regulation of protein binding	other biological processes	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	histone H3-K4 demethylation	cell organization and biogenesis	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	multicellular organismal development	developmental processes	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	muscle cell development	other biological processes	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	histone H3-K9 demethylation	protein metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	histone H3-K9 demethylation	cell organization and biogenesis	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	chromatin modification	cell organization and biogenesis	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	"negative regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	"negative regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	negative regulation of transcription factor activity	RNA metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	histone H3-K4 demethylation	protein metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	negative regulation of apoptosis	death	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	positive regulation of transcription factor activity	RNA metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	"transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	oxidation reduction	other metabolic processes	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	blood coagulation	stress response	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	negative regulation of DNA binding	other biological processes	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	protein amino acid demethylation	protein metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c29883	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific histone demethylase 1A (EC 1.-.-.-) (BRAF35-HDAC complex protein BHC110) (Flavin-containing amine oxidase domain-containing protein 2)
ruditapes_c13854	positive regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 4 (Akt substrate of 160 kDa) (AS160)
ruditapes_c19862	regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 4 (Akt substrate of 160 kDa) (AS160)
ruditapes_c13854	regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 4 (Akt substrate of 160 kDa) (AS160)
ruditapes_c13854	positive regulation of GTPase activity	other biological processes	P	TBC1 domain family member 4 (Akt substrate of 160 kDa) (AS160)
ruditapes_c19862	positive regulation of GTPase activity	other biological processes	P	TBC1 domain family member 4 (Akt substrate of 160 kDa) (AS160)
ruditapes_c19862	positive regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 4 (Akt substrate of 160 kDa) (AS160)
ruditapes_c21087	peptide hormone processing	protein metabolism	P	Endothelin-converting enzyme 2 (ECE-2) [Includes: Methyltransferase-like region (EC 2.1.1.-); Endothelin-converting enzyme 2 region (EC 3.4.24.71)]
ruditapes_c21087	metabolic process	other metabolic processes	P	Endothelin-converting enzyme 2 (ECE-2) [Includes: Methyltransferase-like region (EC 2.1.1.-); Endothelin-converting enzyme 2 region (EC 3.4.24.71)]
ruditapes_c21087	brain development	developmental processes	P	Endothelin-converting enzyme 2 (ECE-2) [Includes: Methyltransferase-like region (EC 2.1.1.-); Endothelin-converting enzyme 2 region (EC 3.4.24.71)]
ruditapes_c21087	cell-cell signaling	cell-cell signaling	P	Endothelin-converting enzyme 2 (ECE-2) [Includes: Methyltransferase-like region (EC 2.1.1.-); Endothelin-converting enzyme 2 region (EC 3.4.24.71)]
ruditapes_c21087	cardioblast differentiation	developmental processes	P	Endothelin-converting enzyme 2 (ECE-2) [Includes: Methyltransferase-like region (EC 2.1.1.-); Endothelin-converting enzyme 2 region (EC 3.4.24.71)]
ruditapes_c21087	heart development	developmental processes	P	Endothelin-converting enzyme 2 (ECE-2) [Includes: Methyltransferase-like region (EC 2.1.1.-); Endothelin-converting enzyme 2 region (EC 3.4.24.71)]
ruditapes_c21087	methylation	other metabolic processes	P	Endothelin-converting enzyme 2 (ECE-2) [Includes: Methyltransferase-like region (EC 2.1.1.-); Endothelin-converting enzyme 2 region (EC 3.4.24.71)]
ruditapes_c21087	proteolysis	protein metabolism	P	Endothelin-converting enzyme 2 (ECE-2) [Includes: Methyltransferase-like region (EC 2.1.1.-); Endothelin-converting enzyme 2 region (EC 3.4.24.71)]
ruditapes_c25562	regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 12
ruditapes_c25562	positive regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 12
ruditapes_c25562	positive regulation of GTPase activity	other biological processes	P	TBC1 domain family member 12
ruditapes_lrc17618	inflammatory response	stress response	P	Lymphocyte antigen 75 (Ly-75) (C-type lectin domain family 13 member B) (DEC-205) (gp200-MR6) (CD antigen CD205)
ruditapes_lrc17618	endocytosis	transport	P	Lymphocyte antigen 75 (Ly-75) (C-type lectin domain family 13 member B) (DEC-205) (gp200-MR6) (CD antigen CD205)
ruditapes_lrc17618	endocytosis	cell organization and biogenesis	P	Lymphocyte antigen 75 (Ly-75) (C-type lectin domain family 13 member B) (DEC-205) (gp200-MR6) (CD antigen CD205)
ruditapes_lrc17618	immune response	other biological processes	P	Lymphocyte antigen 75 (Ly-75) (C-type lectin domain family 13 member B) (DEC-205) (gp200-MR6) (CD antigen CD205)
ruditapes_c25457	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)
ruditapes_c25457	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)
ruditapes_c25457	heart looping	developmental processes	P	Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)
ruditapes_c25457	cell differentiation	other biological processes	P	Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)
ruditapes_c25457	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)
ruditapes_c25457	determination of left/right symmetry	developmental processes	P	Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)
ruditapes_c25457	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)
ruditapes_c25457	nervous system development	developmental processes	P	Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)
ruditapes_c25457	pattern specification process	developmental processes	P	Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)
ruditapes_c25457	multicellular organismal development	developmental processes	P	Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)
ruditapes_c25457	anterior/posterior pattern formation	developmental processes	P	Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)
ruditapes_c20405	multicellular organismal development	developmental processes	P	Plexin-C1 (Virus-encoded semaphorin protein receptor) (CD antigen CD232)
ruditapes_c20405	axon guidance	developmental processes	P	Plexin-C1 (Virus-encoded semaphorin protein receptor) (CD antigen CD232)
ruditapes_c20405	axon guidance	cell organization and biogenesis	P	Plexin-C1 (Virus-encoded semaphorin protein receptor) (CD antigen CD232)
ruditapes_c20405	signal transduction	signal transduction	P	Plexin-C1 (Virus-encoded semaphorin protein receptor) (CD antigen CD232)
ruditapes_c20405	cell adhesion	cell adhesion	P	Plexin-C1 (Virus-encoded semaphorin protein receptor) (CD antigen CD232)
ruditapes_c13781	spermatogenesis	other biological processes	P	Tudor domain-containing protein 6 (Antigen NY-CO-45) (Cancer/testis antigen 41.2) (CT41.2)
ruditapes_c13781	germ cell development	other biological processes	P	Tudor domain-containing protein 6 (Antigen NY-CO-45) (Cancer/testis antigen 41.2) (CT41.2)
ruditapes_c13781	multicellular organismal development	developmental processes	P	Tudor domain-containing protein 6 (Antigen NY-CO-45) (Cancer/testis antigen 41.2) (CT41.2)
ruditapes_c13781	cell differentiation	other biological processes	P	Tudor domain-containing protein 6 (Antigen NY-CO-45) (Cancer/testis antigen 41.2) (CT41.2)
ruditapes_c9915	nuclear export	transport	P	Nuclear export mediator factor NEMF (Antigen NY-CO-1) (Serologically defined colon cancer antigen 1)
ruditapes_c1773	transport	transport	P	Perilipin-3 (47 kDa mannose 6-phosphate receptor-binding protein) (47 kDa MPR-binding protein) (Cargo selection protein TIP47) (Mannose-6-phosphate receptor-binding protein 1) (Placental protein 17) (PP17)
ruditapes_c1773	vesicle-mediated transport	transport	P	Perilipin-3 (47 kDa mannose 6-phosphate receptor-binding protein) (47 kDa MPR-binding protein) (Cargo selection protein TIP47) (Mannose-6-phosphate receptor-binding protein 1) (Placental protein 17) (PP17)
ruditapes_c5195	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c5195	response to DNA damage stimulus	stress response	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c19431	DNA-dependent DNA replication	DNA metabolism	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c5195	DNA replication	DNA metabolism	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c19431	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c5195	bypass DNA synthesis	stress response	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c5195	bypass DNA synthesis	DNA metabolism	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c5195	DNA-dependent DNA replication	DNA metabolism	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c19431	DNA replication	DNA metabolism	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c19431	bypass DNA synthesis	stress response	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c19431	bypass DNA synthesis	DNA metabolism	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c19431	DNA repair	stress response	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c19431	DNA repair	DNA metabolism	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c19431	response to DNA damage stimulus	stress response	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c5195	DNA repair	stress response	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c5195	DNA repair	DNA metabolism	P	DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (Protein reversionless 3-like) (REV3-like) (hREV3)
ruditapes_c19570	visual perception	other biological processes	P	Sodium/potassium/calcium exchanger 1 (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger)
ruditapes_c19570	transmembrane transport	transport	P	Sodium/potassium/calcium exchanger 1 (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger)
ruditapes_c19570	ion transport	transport	P	Sodium/potassium/calcium exchanger 1 (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger)
ruditapes_c19570	response to stimulus	other biological processes	P	Sodium/potassium/calcium exchanger 1 (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger)
ruditapes_c19570	response to light intensity	other biological processes	P	Sodium/potassium/calcium exchanger 1 (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger)
ruditapes_c19570	calcium ion transport	transport	P	Sodium/potassium/calcium exchanger 1 (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger)
ruditapes_c19570	transport	transport	P	Sodium/potassium/calcium exchanger 1 (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger)
ruditapes2_c2978	intracellular protein transport	transport	P	Sorting nexin-2 (Transformation-related gene 9 protein) (TRG-9)
ruditapes2_c2978	cell communication	other biological processes	P	Sorting nexin-2 (Transformation-related gene 9 protein) (TRG-9)
ruditapes2_c2978	transport	transport	P	Sorting nexin-2 (Transformation-related gene 9 protein) (TRG-9)
ruditapes2_c2978	protein transport	transport	P	Sorting nexin-2 (Transformation-related gene 9 protein) (TRG-9)
ruditapes2_c2978	endocytosis	transport	P	Sorting nexin-2 (Transformation-related gene 9 protein) (TRG-9)
ruditapes2_c2978	endocytosis	cell organization and biogenesis	P	Sorting nexin-2 (Transformation-related gene 9 protein) (TRG-9)
ruditapes_c15569	folic acid transport	transport	P	Thiamine transporter 1 (ThTr-1) (ThTr1) (Solute carrier family 19 member 2) (Thiamine carrier 1) (TC1)
ruditapes_c15569	vitamin metabolic process	other metabolic processes	P	Thiamine transporter 1 (ThTr-1) (ThTr1) (Solute carrier family 19 member 2) (Thiamine carrier 1) (TC1)
ruditapes_c15569	water-soluble vitamin metabolic process	other metabolic processes	P	Thiamine transporter 1 (ThTr-1) (ThTr1) (Solute carrier family 19 member 2) (Thiamine carrier 1) (TC1)
ruditapes_c15569	thiamin transport	transport	P	Thiamine transporter 1 (ThTr-1) (ThTr1) (Solute carrier family 19 member 2) (Thiamine carrier 1) (TC1)
ruditapes_c15569	thiamin and derivative metabolic process	other metabolic processes	P	Thiamine transporter 1 (ThTr-1) (ThTr1) (Solute carrier family 19 member 2) (Thiamine carrier 1) (TC1)
ruditapes_c15569	transport	transport	P	Thiamine transporter 1 (ThTr-1) (ThTr1) (Solute carrier family 19 member 2) (Thiamine carrier 1) (TC1)
ruditapes_c5402	translation	protein metabolism	P	"28S ribosomal protein S14, mitochondrial (MRP-S14) (S14mt)"
ruditapes_c3814	translation	protein metabolism	P	"28S ribosomal protein S14, mitochondrial (MRP-S14) (S14mt)"
ruditapes_c22880	transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim17-B
ruditapes_c22880	protein transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim17-B
ruditapes_c22880	protein targeting to mitochondrion	transport	P	Mitochondrial import inner membrane translocase subunit Tim17-B
ruditapes_c22880	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim17-B
ruditapes_c22880	intracellular protein transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim17-B
ruditapes_c19566	ribosome biogenesis	other biological processes	P	H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (Nucleolar protein family A member 4) (snoRNP protein DKC1)
ruditapes_c19566	telomere maintenance	DNA metabolism	P	H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (Nucleolar protein family A member 4) (snoRNP protein DKC1)
ruditapes_c19566	telomere maintenance	cell organization and biogenesis	P	H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (Nucleolar protein family A member 4) (snoRNP protein DKC1)
ruditapes_c19566	telomere maintenance via telomerase	DNA metabolism	P	H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (Nucleolar protein family A member 4) (snoRNP protein DKC1)
ruditapes_c19566	telomere maintenance via telomerase	cell organization and biogenesis	P	H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (Nucleolar protein family A member 4) (snoRNP protein DKC1)
ruditapes_c19566	rRNA processing	RNA metabolism	P	H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (Nucleolar protein family A member 4) (snoRNP protein DKC1)
ruditapes_c19566	RNA modification	RNA metabolism	P	H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (Nucleolar protein family A member 4) (snoRNP protein DKC1)
ruditapes_c19566	cell proliferation	cell cycle and proliferation	P	H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (Nucleolar protein family A member 4) (snoRNP protein DKC1)
ruditapes_c19566	RNA processing	RNA metabolism	P	H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (Nucleolar protein family A member 4) (snoRNP protein DKC1)
ruditapes_c19566	pseudouridine synthesis	RNA metabolism	P	H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (Nucleolar protein family A member 4) (snoRNP protein DKC1)
ruditapes_c31236	visual perception	other biological processes	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	axon guidance	developmental processes	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	axon guidance	cell organization and biogenesis	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	transmembrane transport	transport	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	dendrite morphogenesis	developmental processes	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	dendrite morphogenesis	cell organization and biogenesis	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	calcium ion transport	transport	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	transport	transport	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	retina development in camera-type eye	developmental processes	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	transmembrane calcium ion transport	transport	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	cellular calcium ion homeostasis	other biological processes	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	detection of light stimulus involved in visual perception	other biological processes	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	ion transport	transport	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	axonogenesis	developmental processes	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	axonogenesis	cell organization and biogenesis	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	regulation of transmembrane ion transport	transport	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes_c31236	response to stimulus	other biological processes	P	Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage-gated calcium channel subunit alpha Cav1.4)
ruditapes2_lrc3905	protein autoubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase TRIM13 (EC 6.3.2.-) (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Leukemia-associated protein 5) (Putative tumor suppressor RFP2) (RING finger protein 77) (Ret finger protein 2) (Tripartite motif-containing protein 13)
ruditapes2_lrc3905	anatomical structure morphogenesis	other biological processes	P	E3 ubiquitin-protein ligase TRIM13 (EC 6.3.2.-) (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Leukemia-associated protein 5) (Putative tumor suppressor RFP2) (RING finger protein 77) (Ret finger protein 2) (Tripartite motif-containing protein 13)
ruditapes2_lrc3905	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	E3 ubiquitin-protein ligase TRIM13 (EC 6.3.2.-) (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Leukemia-associated protein 5) (Putative tumor suppressor RFP2) (RING finger protein 77) (Ret finger protein 2) (Tripartite motif-containing protein 13)
ruditapes2_lrc3905	signal transduction	signal transduction	P	E3 ubiquitin-protein ligase TRIM13 (EC 6.3.2.-) (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Leukemia-associated protein 5) (Putative tumor suppressor RFP2) (RING finger protein 77) (Ret finger protein 2) (Tripartite motif-containing protein 13)
ruditapes2_lrc3905	ER-associated protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase TRIM13 (EC 6.3.2.-) (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Leukemia-associated protein 5) (Putative tumor suppressor RFP2) (RING finger protein 77) (Ret finger protein 2) (Tripartite motif-containing protein 13)
ruditapes2_lrc3905	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase TRIM13 (EC 6.3.2.-) (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Leukemia-associated protein 5) (Putative tumor suppressor RFP2) (RING finger protein 77) (Ret finger protein 2) (Tripartite motif-containing protein 13)
ruditapes2_c707	cellular response to starvation	stress response	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	proteolysis	protein metabolism	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	cell communication	other biological processes	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	autophagic cell death	death	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	decidualization	developmental processes	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	response to gonadotropin stimulus	other biological processes	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	response to glucose stimulus	other biological processes	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	male gonad development	developmental processes	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	nerve development	developmental processes	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	response to glucocorticoid stimulus	other biological processes	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	response to organic cyclic substance	other biological processes	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	spermatogenesis	other biological processes	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	Sertoli cell differentiation	developmental processes	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes2_c707	multicellular organismal aging	developmental processes	P	Cathepsin L2 (EC 3.4.22.43) (Cathepsin U) (Cathepsin V)
ruditapes_c10979	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase)
ruditapes_c10979	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase)
ruditapes2_c4186	translation	protein metabolism	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c3612	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c3612	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c3265	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c3265	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc33899	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc33899	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c3265	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c3265	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c4186	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c4186	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c6299	translation	protein metabolism	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc32551	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc32551	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c3612	translation	protein metabolism	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c1451	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c3265	translation	protein metabolism	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc35497	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc35497	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c1451	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c1451	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c6299	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c6299	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c3612	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c3612	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c1451	translation	protein metabolism	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c1451	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc35497	translation	protein metabolism	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc33899	translation	protein metabolism	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc30594	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc30594	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc25410	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc25410	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc33899	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc33899	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc35497	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc35497	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc32551	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc32551	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc30594	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc25410	translation	protein metabolism	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc32551	translation	protein metabolism	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c6299	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c6299	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc30594	translation	protein metabolism	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc25410	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc25410	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c4186	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c4186	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes_lrc30594	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10 (QM protein homolog) (dQM)
ruditapes2_c2071	metabolic process	other metabolic processes	P	"Hemocyanin G-type, units Oda to Odg"
ruditapes2_c2071	transport	transport	P	"Hemocyanin G-type, units Oda to Odg"
ruditapes2_c2071	oxygen transport	transport	P	"Hemocyanin G-type, units Oda to Odg"
ruditapes2_c2071	oxidation reduction	other metabolic processes	P	"Hemocyanin G-type, units Oda to Odg"
ruditapes_c10399	metabolic process	other metabolic processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	negative regulation of ovulation	other biological processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	morphogenesis of embryonic epithelium	developmental processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	axonogenesis	developmental processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	axonogenesis	cell organization and biogenesis	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	embryonic development ending in birth or egg hatching	developmental processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	multicellular organismal development	developmental processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	protein amino acid phosphorylation	protein metabolism	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	embryonic body morphogenesis	developmental processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	ephrin receptor signaling pathway	signal transduction	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	phosphorylation	other metabolic processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	oocyte maturation	other biological processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	axon guidance	developmental processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	axon guidance	cell organization and biogenesis	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	peptidyl-tyrosine phosphorylation	protein metabolism	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	body morphogenesis	other biological processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c10399	embryonic development	developmental processes	P	Ephrin receptor 1 (EC 2.7.10.1) (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1)
ruditapes_c18322	translation	protein metabolism	P	60S ribosomal protein L37a
ruditapes2_c468	translation	protein metabolism	P	60S ribosomal protein L37a
ruditapes2_c4105	translational elongation	protein metabolism	P	60S acidic ribosomal protein P2
ruditapes_lrc26499	translational elongation	protein metabolism	P	60S acidic ribosomal protein P2
ruditapes2_c215	translational elongation	protein metabolism	P	60S acidic ribosomal protein P2
ruditapes_c20270	cell adhesion	cell adhesion	P	Flotillin-2
ruditapes_c9473	mitosis	cell cycle and proliferation	P	Katanin p80 WD40 repeat-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin)
ruditapes_c9473	mitosis	cell organization and biogenesis	P	Katanin p80 WD40 repeat-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin)
ruditapes_c30728	cell cycle	cell cycle and proliferation	P	Katanin p80 WD40 repeat-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin)
ruditapes_c9473	cell division	other biological processes	P	Katanin p80 WD40 repeat-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin)
ruditapes_c30728	cell division	other biological processes	P	Katanin p80 WD40 repeat-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin)
ruditapes_c30728	mitosis	cell cycle and proliferation	P	Katanin p80 WD40 repeat-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin)
ruditapes_c30728	mitosis	cell organization and biogenesis	P	Katanin p80 WD40 repeat-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin)
ruditapes_c9473	cell cycle	cell cycle and proliferation	P	Katanin p80 WD40 repeat-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin)
ruditapes_c24848	nitric oxide biosynthetic process	other metabolic processes	P	Nitric oxide synthase (NOS) (EC 1.14.13.39)
ruditapes_c24848	oxidation reduction	other metabolic processes	P	Nitric oxide synthase (NOS) (EC 1.14.13.39)
ruditapes_c18440	DNA replication	DNA metabolism	P	Probable DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c18440	receptor-mediated endocytosis	transport	P	Probable DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c18440	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c18440	growth	other biological processes	P	Probable DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c18440	hermaphrodite genitalia development	developmental processes	P	Probable DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c18440	locomotion	other biological processes	P	Probable DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c18440	embryonic development	developmental processes	P	Probable DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c18440	nematode larval development	developmental processes	P	Probable DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c18440	gastrulation with mouth forming first	developmental processes	P	Probable DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c18440	body morphogenesis	other biological processes	P	Probable DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c18440	embryonic development ending in birth or egg hatching	developmental processes	P	Probable DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c16659	oxidation reduction	other metabolic processes	P	Probable phytanoyl-CoA dioxygenase (EC 1.14.11.18) (Phytanic acid oxidase) (Phytanoyl-CoA alpha-hydroxylase) (PhyH)
ruditapes_c10044	oxidation reduction	other metabolic processes	P	Probable phytanoyl-CoA dioxygenase (EC 1.14.11.18) (Phytanic acid oxidase) (Phytanoyl-CoA alpha-hydroxylase) (PhyH)
ruditapes_c11809	oxidation reduction	other metabolic processes	P	Probable phytanoyl-CoA dioxygenase (EC 1.14.11.18) (Phytanic acid oxidase) (Phytanoyl-CoA alpha-hydroxylase) (PhyH)
ruditapes2_c2597	oxidation reduction	other metabolic processes	P	Probable phytanoyl-CoA dioxygenase (EC 1.14.11.18) (Phytanic acid oxidase) (Phytanoyl-CoA alpha-hydroxylase) (PhyH)
ruditapes_c9333	oxidation reduction	other metabolic processes	P	Probable phytanoyl-CoA dioxygenase (EC 1.14.11.18) (Phytanic acid oxidase) (Phytanoyl-CoA alpha-hydroxylase) (PhyH)
ruditapes_c9334	regulation of apoptosis	death	P	Putative inhibitor of apoptosis
ruditapes_c9334	apoptosis	death	P	Putative inhibitor of apoptosis
ruditapes_c11028	regulation of blood pressure	other biological processes	P	Prostaglandin G/H synthase 1 (EC 1.14.99.1) (Cyclooxygenase-1) (COX-1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1) (Prostaglandin-endoperoxide synthase 1)
ruditapes_c11028	prostaglandin biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 1 (EC 1.14.99.1) (Cyclooxygenase-1) (COX-1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1) (Prostaglandin-endoperoxide synthase 1)
ruditapes_c11028	fatty acid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 1 (EC 1.14.99.1) (Cyclooxygenase-1) (COX-1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1) (Prostaglandin-endoperoxide synthase 1)
ruditapes_c11028	response to oxidative stress	stress response	P	Prostaglandin G/H synthase 1 (EC 1.14.99.1) (Cyclooxygenase-1) (COX-1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1) (Prostaglandin-endoperoxide synthase 1)
ruditapes_c11028	prostaglandin metabolic process	other metabolic processes	P	Prostaglandin G/H synthase 1 (EC 1.14.99.1) (Cyclooxygenase-1) (COX-1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1) (Prostaglandin-endoperoxide synthase 1)
ruditapes_c11028	lipid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 1 (EC 1.14.99.1) (Cyclooxygenase-1) (COX-1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1) (Prostaglandin-endoperoxide synthase 1)
ruditapes_c11028	regulation of cell proliferation	cell cycle and proliferation	P	Prostaglandin G/H synthase 1 (EC 1.14.99.1) (Cyclooxygenase-1) (COX-1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1) (Prostaglandin-endoperoxide synthase 1)
ruditapes_c11028	oxidation reduction	other metabolic processes	P	Prostaglandin G/H synthase 1 (EC 1.14.99.1) (Cyclooxygenase-1) (COX-1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1) (Prostaglandin-endoperoxide synthase 1)
ruditapes_c11028	cyclooxygenase pathway	other metabolic processes	P	Prostaglandin G/H synthase 1 (EC 1.14.99.1) (Cyclooxygenase-1) (COX-1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1) (Prostaglandin-endoperoxide synthase 1)
ruditapes_lrc34945	prostaglandin biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes2_lrc5075	response to oxidative stress	stress response	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc34818	prostaglandin biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc34818	fatty acid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc34945	lipid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes2_lrc5075	oxidation reduction	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc38867	response to oxidative stress	stress response	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_s36495	response to oxidative stress	stress response	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc34818	response to oxidative stress	stress response	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes2_lrc5075	fatty acid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes2_lrc5075	prostaglandin biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc34945	fatty acid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_c31285	lipid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc34945	response to oxidative stress	stress response	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc34818	oxidation reduction	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_c31285	oxidation reduction	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_s36495	fatty acid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_s36495	prostaglandin biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc34818	lipid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc38867	prostaglandin biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_s36495	lipid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_s36495	oxidation reduction	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_c31285	fatty acid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_c31285	prostaglandin biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc38867	oxidation reduction	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_c31285	response to oxidative stress	stress response	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes2_lrc5075	lipid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc38867	fatty acid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc38867	lipid biosynthetic process	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_lrc34945	oxidation reduction	other metabolic processes	P	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)
ruditapes_c14289	signal transduction	signal transduction	P	Sperm surface protein Sp17 (Sperm autoantigenic protein 17)
ruditapes_c14289	binding of sperm to zona pellucida	other biological processes	P	Sperm surface protein Sp17 (Sperm autoantigenic protein 17)
ruditapes2_c2381	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes2_c2381	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes2_c2381	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes2_c3091	metabolic process	other metabolic processes	P	Delta-selinene synthase (EC 4.2.3.71) (EC 4.2.3.76) (Agfdsel1)
ruditapes_c8244	histone phosphorylation	protein metabolism	P	Serine/threonine-protein kinase Aurora-3 (AtAur3) (EC 2.7.11.1) (Aurora-like kinase 3)
ruditapes_c8244	histone phosphorylation	cell organization and biogenesis	P	Serine/threonine-protein kinase Aurora-3 (AtAur3) (EC 2.7.11.1) (Aurora-like kinase 3)
ruditapes_c8244	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase Aurora-3 (AtAur3) (EC 2.7.11.1) (Aurora-like kinase 3)
ruditapes_c8244	histone H3-S28 phosphorylation	protein metabolism	P	Serine/threonine-protein kinase Aurora-3 (AtAur3) (EC 2.7.11.1) (Aurora-like kinase 3)
ruditapes_c8244	histone H3-S28 phosphorylation	cell organization and biogenesis	P	Serine/threonine-protein kinase Aurora-3 (AtAur3) (EC 2.7.11.1) (Aurora-like kinase 3)
ruditapes_c8244	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase Aurora-3 (AtAur3) (EC 2.7.11.1) (Aurora-like kinase 3)
ruditapes_c8244	histone H3-S10 phosphorylation	protein metabolism	P	Serine/threonine-protein kinase Aurora-3 (AtAur3) (EC 2.7.11.1) (Aurora-like kinase 3)
ruditapes_c8244	histone H3-S10 phosphorylation	cell organization and biogenesis	P	Serine/threonine-protein kinase Aurora-3 (AtAur3) (EC 2.7.11.1) (Aurora-like kinase 3)
ruditapes_c28077	transport	transport	P	Vacuolar-sorting receptor 5 (AtVSR5) (BP80-like protein e) (AtBP80e) (Epidermal growth factor receptor-like protein 5) (AtELP5)
ruditapes_c28077	protein transport	transport	P	Vacuolar-sorting receptor 5 (AtVSR5) (BP80-like protein e) (AtBP80e) (Epidermal growth factor receptor-like protein 5) (AtELP5)
ruditapes_c29880	phosphorylation	other metabolic processes	P	G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 (EC 2.7.11.1)
ruditapes_c29880	protein amino acid phosphorylation	protein metabolism	P	G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 (EC 2.7.11.1)
ruditapes_c29880	recognition of pollen	other biological processes	P	G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 (EC 2.7.11.1)
ruditapes2_c4277	defense response	stress response	P	Probable disease resistance protein At1g61310
ruditapes_lrc10363	defense response	stress response	P	Probable disease resistance protein At1g61300
ruditapes2_lrc2480	proteolysis	protein metabolism	P	Serine carboxypeptidase-like 9 (Sinapoylglucose--sinapoylglucose O-sinapoyltransferase) (SST) (EC 2.3.1.103) (Sinapoylglucose--sinapoylglucose acyltransferase)
ruditapes_c27417	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SUVR5 (EC 2.1.1.43) (C2H2 zinc finger-SET histone methyltransferase) (Protein C2H2 SET) (Protein SET DOMAIN GROUP 6) (Suppressor of variegation 3-9-related protein 5) (Su(var)3-9-related protein 5)
ruditapes_c27417	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase SUVR5 (EC 2.1.1.43) (C2H2 zinc finger-SET histone methyltransferase) (Protein C2H2 SET) (Protein SET DOMAIN GROUP 6) (Suppressor of variegation 3-9-related protein 5) (Su(var)3-9-related protein 5)
ruditapes_c27417	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SUVR5 (EC 2.1.1.43) (C2H2 zinc finger-SET histone methyltransferase) (Protein C2H2 SET) (Protein SET DOMAIN GROUP 6) (Suppressor of variegation 3-9-related protein 5) (Su(var)3-9-related protein 5)
ruditapes_c27417	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase SUVR5 (EC 2.1.1.43) (C2H2 zinc finger-SET histone methyltransferase) (Protein C2H2 SET) (Protein SET DOMAIN GROUP 6) (Suppressor of variegation 3-9-related protein 5) (Su(var)3-9-related protein 5)
ruditapes_c23351	defense response	stress response	P	Major allergen Pyr c 1 (allergen Pyr c 1)
ruditapes_c23351	response to biotic stimulus	other biological processes	P	Major allergen Pyr c 1 (allergen Pyr c 1)
ruditapes_c9584	transport	transport	P	"K(+) efflux antiporter 2, chloroplastic (AtKEA2)"
ruditapes_c9584	transmembrane transport	transport	P	"K(+) efflux antiporter 2, chloroplastic (AtKEA2)"
ruditapes_c9584	ion transport	transport	P	"K(+) efflux antiporter 2, chloroplastic (AtKEA2)"
ruditapes_c9584	potassium ion transport	transport	P	"K(+) efflux antiporter 2, chloroplastic (AtKEA2)"
ruditapes_c9584	cation transport	transport	P	"K(+) efflux antiporter 2, chloroplastic (AtKEA2)"
ruditapes_lrc32570	translation	protein metabolism	P	60S ribosomal protein L5
ruditapes_c570	protein amino acid phosphorylation	protein metabolism	P	CBL-interacting serine/threonine-protein kinase 6 (EC 2.7.11.1) (SNF1-related kinase 3.14) (SOS2-like protein kinase PKS4) (SOS3-interacting protein 3)
ruditapes_c570	basipetal auxin transport	transport	P	CBL-interacting serine/threonine-protein kinase 6 (EC 2.7.11.1) (SNF1-related kinase 3.14) (SOS2-like protein kinase PKS4) (SOS3-interacting protein 3)
ruditapes_c570	multicellular organismal development	developmental processes	P	CBL-interacting serine/threonine-protein kinase 6 (EC 2.7.11.1) (SNF1-related kinase 3.14) (SOS2-like protein kinase PKS4) (SOS3-interacting protein 3)
ruditapes_c570	response to water deprivation	stress response	P	CBL-interacting serine/threonine-protein kinase 6 (EC 2.7.11.1) (SNF1-related kinase 3.14) (SOS2-like protein kinase PKS4) (SOS3-interacting protein 3)
ruditapes_c570	phosphorylation	other metabolic processes	P	CBL-interacting serine/threonine-protein kinase 6 (EC 2.7.11.1) (SNF1-related kinase 3.14) (SOS2-like protein kinase PKS4) (SOS3-interacting protein 3)
ruditapes_c570	hyperosmotic salinity response	stress response	P	CBL-interacting serine/threonine-protein kinase 6 (EC 2.7.11.1) (SNF1-related kinase 3.14) (SOS2-like protein kinase PKS4) (SOS3-interacting protein 3)
ruditapes_c570	response to abiotic stimulus	other biological processes	P	CBL-interacting serine/threonine-protein kinase 6 (EC 2.7.11.1) (SNF1-related kinase 3.14) (SOS2-like protein kinase PKS4) (SOS3-interacting protein 3)
ruditapes_c570	response to salt stress	stress response	P	CBL-interacting serine/threonine-protein kinase 6 (EC 2.7.11.1) (SNF1-related kinase 3.14) (SOS2-like protein kinase PKS4) (SOS3-interacting protein 3)
ruditapes_c570	signal transduction	signal transduction	P	CBL-interacting serine/threonine-protein kinase 6 (EC 2.7.11.1) (SNF1-related kinase 3.14) (SOS2-like protein kinase PKS4) (SOS3-interacting protein 3)
ruditapes_c22999	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MSH3 (AtMSH3) (MutS protein homolog 3)
ruditapes_c22999	DNA repair	stress response	P	DNA mismatch repair protein MSH3 (AtMSH3) (MutS protein homolog 3)
ruditapes_c22999	DNA repair	DNA metabolism	P	DNA mismatch repair protein MSH3 (AtMSH3) (MutS protein homolog 3)
ruditapes_c22999	mismatch repair	stress response	P	DNA mismatch repair protein MSH3 (AtMSH3) (MutS protein homolog 3)
ruditapes_c22999	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MSH3 (AtMSH3) (MutS protein homolog 3)
ruditapes_lrc9712	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Ethylene-responsive transcription factor ERF060
ruditapes_lrc9712	"transcription, DNA-dependent"	RNA metabolism	P	Ethylene-responsive transcription factor ERF060
ruditapes_lrc9712	ethylene mediated signaling pathway	signal transduction	P	Ethylene-responsive transcription factor ERF060
ruditapes_c4864	translation	protein metabolism	P	60S ribosomal protein L18 (Fragment)
ruditapes_c30703	lipid metabolic process	other metabolic processes	P	GDSL esterase/lipase At2g19010 (EC 3.1.1.-) (Extracellular lipase At2g19010)
ruditapes_c30703	lipid catabolic process	other metabolic processes	P	GDSL esterase/lipase At2g19010 (EC 3.1.1.-) (Extracellular lipase At2g19010)
ruditapes_c21116	transposition	other biological processes	P	Putative transposase aq
ruditapes_c21116	DNA recombination	DNA metabolism	P	Putative transposase aq
ruditapes_c11738	translation	protein metabolism	P	30S ribosomal protein S6
ruditapes_c4873	translation	protein metabolism	P	30S ribosomal protein S16
ruditapes_lrc35472	translation	protein metabolism	P	Peptide deformylase (PDF) (EC 3.5.1.88) (Polypeptide deformylase)
ruditapes_lrc34683	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate lyase (ASL) (EC 4.3.2.2) (Adenylosuccinase) (ASase)
ruditapes_lrc34683	purine ribonucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate lyase (ASL) (EC 4.3.2.2) (Adenylosuccinase) (ASase)
ruditapes_c17642	biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c17642	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c17642	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c17642	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c17642	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c17642	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c17642	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28865	isoprenoid biosynthetic process	other metabolic processes	P	"Farnesyl diphosphate synthase (FPP synthase) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase) (Geranyltranstransferase)"
ruditapes_c18030	RNA metabolic process	RNA metabolism	P	UPF0097 protein aq
ruditapes_c11363	biopolymer modification	other metabolic processes	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c11363	peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid	protein metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c11363	RNA modification	RNA metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c18286	oxidation reduction	other metabolic processes	P	Probable peroxiredoxin (EC 1.11.1.15)
ruditapes_c16589	oxidation reduction	other metabolic processes	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c16589	queuosine biosynthetic process	RNA metabolism	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c20592	glycolysis	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c20592	oxidation reduction	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c20592	glucose metabolic process	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c7837	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes_c12084	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes_c24454	cellular amino acid biosynthetic process	other metabolic processes	P	"5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)"
ruditapes_c24454	oxidation reduction	other metabolic processes	P	"5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)"
ruditapes_c24454	methionine biosynthetic process	other metabolic processes	P	"5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)"
ruditapes_c24454	methionine metabolic process	other metabolic processes	P	"5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)"
ruditapes2_c5180	ciliary or flagellar motility	other biological processes	P	Flagellar P-ring protein (Basal body P-ring protein)
ruditapes_lrc34985	oxidation reduction	other metabolic processes	P	Putative 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) (KPA reductase) (KPR)
ruditapes_lrc34985	pantothenate biosynthetic process	other metabolic processes	P	Putative 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) (KPA reductase) (KPR)
ruditapes_lrc38324	proteolysis	protein metabolism	P	Lipoprotein signal peptidase (EC 3.4.23.36) (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)
ruditapes_c27811	tRNA processing	RNA metabolism	P	tRNA(Ile)-lysidine synthase (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase)
ruditapes_c35046	viral envelope fusion with host membrane	cell organization and biogenesis	P	Uncharacterized protein aq
ruditapes_c30804	oxidation reduction	other metabolic processes	P	"Chlorocatechol 1,2-dioxygenase (EC 1.13.11.-)"
ruditapes_c30804	aromatic compound catabolic process	other metabolic processes	P	"Chlorocatechol 1,2-dioxygenase (EC 1.13.11.-)"
ruditapes_c30804	cellular aromatic compound metabolic process	other metabolic processes	P	"Chlorocatechol 1,2-dioxygenase (EC 1.13.11.-)"
ruditapes_c30804	catechol metabolic process	other metabolic processes	P	"Chlorocatechol 1,2-dioxygenase (EC 1.13.11.-)"
ruditapes_lrc12411	metabolic process	other metabolic processes	P	Bacitracin synthase 3 (BA3) [Includes: ATP-dependent isoleucine adenylase (IleA) (Isoleucine activase); ATP-dependent D-phenylalanine adenylase (D-PheA) (D-phenylalanine activase); ATP-dependent histidine adenylase (HisA) (Histidine activase); ATP-dependent D-aspartate adenylase (D-AspA) (D-aspartate activase); ATP-dependent asparagine adenylase (AsnA) (Asparagine activase); Aspartate racemase (EC 5.1.1.13); Phenylalanine racemase [ATP hydrolyzing] (EC 5.1.1.11)]
ruditapes_lrc12411	biosynthetic process	other metabolic processes	P	Bacitracin synthase 3 (BA3) [Includes: ATP-dependent isoleucine adenylase (IleA) (Isoleucine activase); ATP-dependent D-phenylalanine adenylase (D-PheA) (D-phenylalanine activase); ATP-dependent histidine adenylase (HisA) (Histidine activase); ATP-dependent D-aspartate adenylase (D-AspA) (D-aspartate activase); ATP-dependent asparagine adenylase (AsnA) (Asparagine activase); Aspartate racemase (EC 5.1.1.13); Phenylalanine racemase [ATP hydrolyzing] (EC 5.1.1.11)]
ruditapes_lrc12411	antibiotic biosynthetic process	other metabolic processes	P	Bacitracin synthase 3 (BA3) [Includes: ATP-dependent isoleucine adenylase (IleA) (Isoleucine activase); ATP-dependent D-phenylalanine adenylase (D-PheA) (D-phenylalanine activase); ATP-dependent histidine adenylase (HisA) (Histidine activase); ATP-dependent D-aspartate adenylase (D-AspA) (D-aspartate activase); ATP-dependent asparagine adenylase (AsnA) (Asparagine activase); Aspartate racemase (EC 5.1.1.13); Phenylalanine racemase [ATP hydrolyzing] (EC 5.1.1.11)]
ruditapes_c20988	DNA restriction-modification system	DNA metabolism	P	Type-2 restriction enzyme BglI (R.BglI) (EC 3.1.21.4) (Endonuclease BglI) (Type II restriction enzyme BglI)
ruditapes_c15728	pathogenesis	other biological processes	P	Serine protease pet autotransporter (EC 3.4.21.-) [Cleaved into: Serine protease pet (Plasmid-encoded toxin pet); Serine protease pet translocator]
ruditapes_c15728	proteolysis	protein metabolism	P	Serine protease pet autotransporter (EC 3.4.21.-) [Cleaved into: Serine protease pet (Plasmid-encoded toxin pet); Serine protease pet translocator]
ruditapes_c18399	glutamine metabolic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisH (EC 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH)
ruditapes_c18399	cellular amino acid biosynthetic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisH (EC 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH)
ruditapes_c18399	histidine biosynthetic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisH (EC 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH)
ruditapes2_c2415	oxidation reduction	other metabolic processes	P	Betaine reductase complex component B subunit beta (EC 1.21.4.4) (Selenoprotein PB beta)
ruditapes_c2141	antibiotic biosynthetic process	other metabolic processes	P	Phenazine biosynthesis protein PhzB 1
ruditapes_c2141	pathogenesis	other biological processes	P	Phenazine biosynthesis protein PhzB 1
ruditapes_c12358	signal transduction	signal transduction	P	Ficolin-1 (Collagen/fibrinogen domain-containing protein 1) (Ficolin-A) (Ficolin-alpha) (M-ficolin)
ruditapes_c28696	positive regulation of gene expression	other metabolic processes	P	E3 SUMO-protein ligase PIAS3 (EC 6.3.2.-) (KChAP) (Potassium channel-associated protein) (Protein inhibitor of activated STAT protein 3)
ruditapes_c28696	positive regulation of protein sumoylation	protein metabolism	P	E3 SUMO-protein ligase PIAS3 (EC 6.3.2.-) (KChAP) (Potassium channel-associated protein) (Protein inhibitor of activated STAT protein 3)
ruditapes_c28696	positive regulation of membrane potential	other biological processes	P	E3 SUMO-protein ligase PIAS3 (EC 6.3.2.-) (KChAP) (Potassium channel-associated protein) (Protein inhibitor of activated STAT protein 3)
ruditapes_c28696	protein sumoylation	protein metabolism	P	E3 SUMO-protein ligase PIAS3 (EC 6.3.2.-) (KChAP) (Potassium channel-associated protein) (Protein inhibitor of activated STAT protein 3)
ruditapes_c28696	response to hormone stimulus	other biological processes	P	E3 SUMO-protein ligase PIAS3 (EC 6.3.2.-) (KChAP) (Potassium channel-associated protein) (Protein inhibitor of activated STAT protein 3)
ruditapes_c28696	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 SUMO-protein ligase PIAS3 (EC 6.3.2.-) (KChAP) (Potassium channel-associated protein) (Protein inhibitor of activated STAT protein 3)
ruditapes_c28696	"transcription, DNA-dependent"	RNA metabolism	P	E3 SUMO-protein ligase PIAS3 (EC 6.3.2.-) (KChAP) (Potassium channel-associated protein) (Protein inhibitor of activated STAT protein 3)
ruditapes_c22147	protein transport	transport	P	Tripartite motif-containing protein 3 (Brain-expressed RING finger protein) (RING finger protein 22)
ruditapes_c22147	transport	transport	P	Tripartite motif-containing protein 3 (Brain-expressed RING finger protein) (RING finger protein 22)
ruditapes_c12948	transcription from RNA polymerase II promoter	RNA metabolism	P	General transcription factor IIH subunit 4 (Basic transcription factor 2 52 kDa subunit) (BTF2 p52) (General transcription factor IIH polypeptide 4) (TFIIH basal transcription factor complex p52 subunit)
ruditapes_c12948	"regulation of transcription, DNA-dependent"	RNA metabolism	P	General transcription factor IIH subunit 4 (Basic transcription factor 2 52 kDa subunit) (BTF2 p52) (General transcription factor IIH polypeptide 4) (TFIIH basal transcription factor complex p52 subunit)
ruditapes_c12948	"transcription, DNA-dependent"	RNA metabolism	P	General transcription factor IIH subunit 4 (Basic transcription factor 2 52 kDa subunit) (BTF2 p52) (General transcription factor IIH polypeptide 4) (TFIIH basal transcription factor complex p52 subunit)
ruditapes_c12948	DNA repair	stress response	P	General transcription factor IIH subunit 4 (Basic transcription factor 2 52 kDa subunit) (BTF2 p52) (General transcription factor IIH polypeptide 4) (TFIIH basal transcription factor complex p52 subunit)
ruditapes_c12948	DNA repair	DNA metabolism	P	General transcription factor IIH subunit 4 (Basic transcription factor 2 52 kDa subunit) (BTF2 p52) (General transcription factor IIH polypeptide 4) (TFIIH basal transcription factor complex p52 subunit)
ruditapes_c12948	response to DNA damage stimulus	stress response	P	General transcription factor IIH subunit 4 (Basic transcription factor 2 52 kDa subunit) (BTF2 p52) (General transcription factor IIH polypeptide 4) (TFIIH basal transcription factor complex p52 subunit)
ruditapes_c12948	protein amino acid phosphorylation	protein metabolism	P	General transcription factor IIH subunit 4 (Basic transcription factor 2 52 kDa subunit) (BTF2 p52) (General transcription factor IIH polypeptide 4) (TFIIH basal transcription factor complex p52 subunit)
ruditapes2_c5910	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8) (Proteasome subunit K)
ruditapes_c919	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8) (Proteasome subunit K)
ruditapes_c919	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8) (Proteasome subunit K)
ruditapes2_c5910	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8) (Proteasome subunit K)
ruditapes_c919	proteolysis	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8) (Proteasome subunit K)
ruditapes2_c5910	proteolysis	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8) (Proteasome subunit K)
ruditapes_c30821	keratinization	developmental processes	P	Putative small proline-rich protein 2J
ruditapes_c19533	sodium-dependent organic cation transport	transport	P	Solute carrier family 22 member 5 (CT1) (High-affinity sodium-dependent carnitine cotransporter) (Organic cation/carnitine transporter 2) (UST2r)
ruditapes_c19533	carnitine transport	transport	P	Solute carrier family 22 member 5 (CT1) (High-affinity sodium-dependent carnitine cotransporter) (Organic cation/carnitine transporter 2) (UST2r)
ruditapes_c19533	transmembrane ion transport	transport	P	Solute carrier family 22 member 5 (CT1) (High-affinity sodium-dependent carnitine cotransporter) (Organic cation/carnitine transporter 2) (UST2r)
ruditapes_c19533	transmembrane transport	transport	P	Solute carrier family 22 member 5 (CT1) (High-affinity sodium-dependent carnitine cotransporter) (Organic cation/carnitine transporter 2) (UST2r)
ruditapes_c19533	antibiotic transport	transport	P	Solute carrier family 22 member 5 (CT1) (High-affinity sodium-dependent carnitine cotransporter) (Organic cation/carnitine transporter 2) (UST2r)
ruditapes_c19533	quorum sensing during interaction with host	other biological processes	P	Solute carrier family 22 member 5 (CT1) (High-affinity sodium-dependent carnitine cotransporter) (Organic cation/carnitine transporter 2) (UST2r)
ruditapes_c19533	positive regulation of intestinal epithelial structure maintenance	other biological processes	P	Solute carrier family 22 member 5 (CT1) (High-affinity sodium-dependent carnitine cotransporter) (Organic cation/carnitine transporter 2) (UST2r)
ruditapes_c19533	quaternary ammonium group transport	transport	P	Solute carrier family 22 member 5 (CT1) (High-affinity sodium-dependent carnitine cotransporter) (Organic cation/carnitine transporter 2) (UST2r)
ruditapes_c19533	ion transport	transport	P	Solute carrier family 22 member 5 (CT1) (High-affinity sodium-dependent carnitine cotransporter) (Organic cation/carnitine transporter 2) (UST2r)
ruditapes_c19533	transport	transport	P	Solute carrier family 22 member 5 (CT1) (High-affinity sodium-dependent carnitine cotransporter) (Organic cation/carnitine transporter 2) (UST2r)
ruditapes_c19533	sodium ion transport	transport	P	Solute carrier family 22 member 5 (CT1) (High-affinity sodium-dependent carnitine cotransporter) (Organic cation/carnitine transporter 2) (UST2r)
ruditapes_c22574	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c22574	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes_s40012	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (P1AB) (Virion protein 0); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s40012	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (P1AB) (Virion protein 0); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s40012	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (P1AB) (Virion protein 0); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s40012	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (P1AB) (Virion protein 0); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s40012	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (P1AB) (Virion protein 0); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s40012	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (P1AB) (Virion protein 0); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s40012	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (P1AB) (Virion protein 0); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s40012	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (P1AB) (Virion protein 0); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c3539	ion transport	transport	P	Potassium voltage-gated channel subfamily G member 2 (Potassium channel cKv6.2) (Voltage-gated potassium channel subunit Kv6.2)
ruditapes2_c3539	regulation of transmembrane ion transport	transport	P	Potassium voltage-gated channel subfamily G member 2 (Potassium channel cKv6.2) (Voltage-gated potassium channel subunit Kv6.2)
ruditapes2_c3539	transport	transport	P	Potassium voltage-gated channel subfamily G member 2 (Potassium channel cKv6.2) (Voltage-gated potassium channel subunit Kv6.2)
ruditapes2_c3539	potassium ion transport	transport	P	Potassium voltage-gated channel subfamily G member 2 (Potassium channel cKv6.2) (Voltage-gated potassium channel subunit Kv6.2)
ruditapes2_c3539	transmembrane transport	transport	P	Potassium voltage-gated channel subfamily G member 2 (Potassium channel cKv6.2) (Voltage-gated potassium channel subunit Kv6.2)
ruditapes2_c2788	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-2 (EC 3.4.25.1)
ruditapes2_c2788	proteolysis	protein metabolism	P	Proteasome subunit alpha type-2 (EC 3.4.25.1)
ruditapes2_c2788	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-2 (EC 3.4.25.1)
ruditapes_c21594	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase receptor Tie-2 (EC 2.7.10.1) (Tyrosine kinase with Ig and EGF homology domains-2)
ruditapes_c21594	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Tyrosine-protein kinase receptor Tie-2 (EC 2.7.10.1) (Tyrosine kinase with Ig and EGF homology domains-2)
ruditapes_c19438	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase receptor Tie-2 (EC 2.7.10.1) (Tyrosine kinase with Ig and EGF homology domains-2)
ruditapes_c19438	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Tyrosine-protein kinase receptor Tie-2 (EC 2.7.10.1) (Tyrosine kinase with Ig and EGF homology domains-2)
ruditapes_c19438	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase receptor Tie-2 (EC 2.7.10.1) (Tyrosine kinase with Ig and EGF homology domains-2)
ruditapes_c21594	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase receptor Tie-2 (EC 2.7.10.1) (Tyrosine kinase with Ig and EGF homology domains-2)
ruditapes2_c2781	negative regulation of dopamine receptor signaling pathway	signal transduction	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	positive regulation of multicellular organism growth	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	regulation of dopamine secretion	transport	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	negative regulation of cell migration	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	regulation of synaptic transmission	cell-cell signaling	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	behavioral response to cocaine	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	G-protein coupled receptor protein signaling pathway	signal transduction	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	positive regulation of growth hormone secretion	transport	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	positive regulation of growth hormone secretion	cell-cell signaling	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	regulation of long-term neuronal synaptic plasticity	cell-cell signaling	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	grooming behavior	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	feeding behavior	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	negative regulation of protein secretion	transport	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	negative regulation of protein kinase B signaling cascade	signal transduction	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	regulation of dopamine uptake	transport	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	regulation of dopamine uptake	cell-cell signaling	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	startle response	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	adult walking behavior	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	negative regulation of blood pressure	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	behavioral response to ethanol	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	negative regulation of cell proliferation	cell cycle and proliferation	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	adult behavior	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	positive regulation of dopamine uptake	cell-cell signaling	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	peristalsis	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	regulation of sodium ion transport	transport	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	response to drug	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	pigmentation	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	locomotory behavior	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	response to light stimulus	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	response to cocaine	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	activation of phospholipase C activity by dopamine receptor signaling pathway	signal transduction	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	dopamine receptor signaling pathway	signal transduction	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	nerve-nerve synaptic transmission	cell-cell signaling	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	positive regulation of dopamine uptake	transport	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	response to amphetamine	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	neurological system process involved in regulation of systemic arterial blood pressure	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	response to histamine	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	inhibition of adenylate cyclase activity by dopamine receptor signaling pathway	signal transduction	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	inhibition of adenylate cyclase activity by dopamine receptor signaling pathway	other metabolic processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	circadian regulation of gene expression	other metabolic processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	axonogenesis	developmental processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	axonogenesis	cell organization and biogenesis	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	associative learning	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	positive regulation of neuroblast proliferation	cell cycle and proliferation	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	positive regulation of neuroblast proliferation	developmental processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	signal transduction	signal transduction	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	"elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)"	signal transduction	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	cerebral cortex GABAergic interneuron migration	developmental processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	regulation of cAMP metabolic process	other metabolic processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	adenohypophysis development	developmental processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	response to morphine	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	dopamine metabolic process	other metabolic processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	sensory perception of smell	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	visual learning	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	protein kinase cascade	signal transduction	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	regulation of heart rate	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	protein localization	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	branching morphogenesis of a nerve	developmental processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	prepulse inhibition	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	arachidonic acid secretion	transport	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	"negative regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	"regulation of synaptic transmission, GABAergic"	cell-cell signaling	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	temperature homeostasis	other biological processes	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes2_c2781	regulation of potassium ion transport	transport	P	D(2) dopamine receptor (Dopamine D2 receptor)
ruditapes_c7354	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-3 (EC 3.4.25.1) (Proteasome chain 13) (Proteasome component C10-II) (Proteasome theta chain)
ruditapes_c5043	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-3 (EC 3.4.25.1) (Proteasome chain 13) (Proteasome component C10-II) (Proteasome theta chain)
ruditapes_c7354	proteolysis	protein metabolism	P	Proteasome subunit beta type-3 (EC 3.4.25.1) (Proteasome chain 13) (Proteasome component C10-II) (Proteasome theta chain)
ruditapes_c5043	proteolysis	protein metabolism	P	Proteasome subunit beta type-3 (EC 3.4.25.1) (Proteasome chain 13) (Proteasome component C10-II) (Proteasome theta chain)
ruditapes_c14798	oxidation reduction	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes_c14798	steroid biosynthetic process	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes_c15402	oxidation reduction	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes_c15402	steroid biosynthetic process	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes_c17569	response to xenobiotic stimulus	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17569	neuron maintenance	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17569	response to metal ion	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17569	superoxide metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17569	oxidation reduction	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17569	response to methylmercury	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17569	removal of superoxide radicals	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_lrc12122	prostaglandin biosynthetic process	other metabolic processes	P	Hematopoietic prostaglandin D synthase (H-PGDS) (EC 5.3.99.2) (GST class-sigma) (Glutathione S-transferase) (EC 2.5.1.18) (Glutathione-dependent PGD synthase) (Glutathione-requiring prostaglandin D synthase) (Prostaglandin-H2 D-isomerase)
ruditapes_lrc12122	lipid biosynthetic process	other metabolic processes	P	Hematopoietic prostaglandin D synthase (H-PGDS) (EC 5.3.99.2) (GST class-sigma) (Glutathione S-transferase) (EC 2.5.1.18) (Glutathione-dependent PGD synthase) (Glutathione-requiring prostaglandin D synthase) (Prostaglandin-H2 D-isomerase)
ruditapes_lrc12122	prostaglandin metabolic process	other metabolic processes	P	Hematopoietic prostaglandin D synthase (H-PGDS) (EC 5.3.99.2) (GST class-sigma) (Glutathione S-transferase) (EC 2.5.1.18) (Glutathione-dependent PGD synthase) (Glutathione-requiring prostaglandin D synthase) (Prostaglandin-H2 D-isomerase)
ruditapes_lrc12122	fatty acid biosynthetic process	other metabolic processes	P	Hematopoietic prostaglandin D synthase (H-PGDS) (EC 5.3.99.2) (GST class-sigma) (Glutathione S-transferase) (EC 2.5.1.18) (Glutathione-dependent PGD synthase) (Glutathione-requiring prostaglandin D synthase) (Prostaglandin-H2 D-isomerase)
ruditapes_c9870	polysaccharide catabolic process	other metabolic processes	P	Probable beta-mannosidase A (EC 3.2.1.25) (Mannanase A) (Mannase A)
ruditapes_c9870	carbohydrate metabolic process	other metabolic processes	P	Probable beta-mannosidase A (EC 3.2.1.25) (Mannanase A) (Mannase A)
ruditapes_c9870	metabolic process	other metabolic processes	P	Probable beta-mannosidase A (EC 3.2.1.25) (Mannanase A) (Mannase A)
ruditapes2_lrc4355	cell wall organization	cell organization and biogenesis	P	"Glucoamylase 1 (EC 3.2.1.3) (1,4-alpha-D-glucan glucohydrolase) (Glucan 1,4-alpha-glucosidase)"
ruditapes2_lrc4355	polysaccharide catabolic process	other metabolic processes	P	"Glucoamylase 1 (EC 3.2.1.3) (1,4-alpha-D-glucan glucohydrolase) (Glucan 1,4-alpha-glucosidase)"
ruditapes2_lrc4355	carbohydrate metabolic process	other metabolic processes	P	"Glucoamylase 1 (EC 3.2.1.3) (1,4-alpha-D-glucan glucohydrolase) (Glucan 1,4-alpha-glucosidase)"
ruditapes2_lrc4355	biofilm formation	other biological processes	P	"Glucoamylase 1 (EC 3.2.1.3) (1,4-alpha-D-glucan glucohydrolase) (Glucan 1,4-alpha-glucosidase)"
ruditapes2_lrc4355	metabolic process	other metabolic processes	P	"Glucoamylase 1 (EC 3.2.1.3) (1,4-alpha-D-glucan glucohydrolase) (Glucan 1,4-alpha-glucosidase)"
ruditapes_c16709	lysine biosynthetic process	other metabolic processes	P	L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31) (Alpha-aminoadipate reductase) (Alpha-AR)
ruditapes_c16709	cellular amino acid biosynthetic process	other metabolic processes	P	L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31) (Alpha-aminoadipate reductase) (Alpha-AR)
ruditapes_c16709	oxidation reduction	other metabolic processes	P	L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31) (Alpha-aminoadipate reductase) (Alpha-AR)
ruditapes_c16709	metabolic process	other metabolic processes	P	L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31) (Alpha-aminoadipate reductase) (Alpha-AR)
ruditapes_c25575	autophagic vacuole formation	stress response	P	Autophagy-related protein 9
ruditapes_c25575	autophagic vacuole formation	other metabolic processes	P	Autophagy-related protein 9
ruditapes_c25575	autophagic vacuole formation	cell organization and biogenesis	P	Autophagy-related protein 9
ruditapes_c25575	protein transport	transport	P	Autophagy-related protein 9
ruditapes_c25575	transport	transport	P	Autophagy-related protein 9
ruditapes_c25575	CVT pathway	transport	P	Autophagy-related protein 9
ruditapes_c25575	CVT pathway	other metabolic processes	P	Autophagy-related protein 9
ruditapes_c25575	autophagy	other metabolic processes	P	Autophagy-related protein 9
ruditapes_c25575	macroautophagy	stress response	P	Autophagy-related protein 9
ruditapes_c25575	macroautophagy	other metabolic processes	P	Autophagy-related protein 9
ruditapes_c25575	cellular response to nitrogen starvation	stress response	P	Autophagy-related protein 9
ruditapes_c1407	metabolic process	other metabolic processes	P	PDZ domain-containing protein C1685.05
ruditapes_c1407	proteolysis involved in cellular protein catabolic process	protein metabolism	P	PDZ domain-containing protein C1685.05
ruditapes_c12208	positive regulation of GTPase activity	other biological processes	P	Vacuolar protein sorting-associated protein 9a (Vacuolar protein-targeting protein 9a)
ruditapes_c12208	protein targeting to vacuole	transport	P	Vacuolar protein sorting-associated protein 9a (Vacuolar protein-targeting protein 9a)
ruditapes_c26054	regulation of mitotic cell cycle	cell cycle and proliferation	P	Septation initiation network scaffold protein cdc11 (SIN scaffold protein cdc11) (Cell division control protein 11)
ruditapes_c26054	cellular protein localization	other biological processes	P	Septation initiation network scaffold protein cdc11 (SIN scaffold protein cdc11) (Cell division control protein 11)
ruditapes_c26054	septation initiation signaling	cell cycle and proliferation	P	Septation initiation network scaffold protein cdc11 (SIN scaffold protein cdc11) (Cell division control protein 11)
ruditapes_c26054	septation initiation signaling	signal transduction	P	Septation initiation network scaffold protein cdc11 (SIN scaffold protein cdc11) (Cell division control protein 11)
ruditapes_c26054	septation initiation signaling	cell organization and biogenesis	P	Septation initiation network scaffold protein cdc11 (SIN scaffold protein cdc11) (Cell division control protein 11)
ruditapes_c26054	cytokinesis during cell cycle	cell cycle and proliferation	P	Septation initiation network scaffold protein cdc11 (SIN scaffold protein cdc11) (Cell division control protein 11)
ruditapes_c25167	apoptosis	death	P	Metacaspase-1 (EC 3.4.22.-)
ruditapes_c25167	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Metacaspase-1 (EC 3.4.22.-)
ruditapes_c25167	cellular response to stress	stress response	P	Metacaspase-1 (EC 3.4.22.-)
ruditapes_c25167	proteolysis	protein metabolism	P	Metacaspase-1 (EC 3.4.22.-)
ruditapes_c29936	DNA repair	stress response	P	DNA mismatch repair protein msh6
ruditapes_c29936	DNA repair	DNA metabolism	P	DNA mismatch repair protein msh6
ruditapes_c29936	meiotic mismatch repair	cell cycle and proliferation	P	DNA mismatch repair protein msh6
ruditapes_c29936	meiotic mismatch repair	stress response	P	DNA mismatch repair protein msh6
ruditapes_c29936	meiotic mismatch repair	DNA metabolism	P	DNA mismatch repair protein msh6
ruditapes_c29936	maintenance of DNA repeat elements	cell organization and biogenesis	P	DNA mismatch repair protein msh6
ruditapes_c29936	response to UV	other biological processes	P	DNA mismatch repair protein msh6
ruditapes_c29936	mismatch repair	stress response	P	DNA mismatch repair protein msh6
ruditapes_c29936	mismatch repair	DNA metabolism	P	DNA mismatch repair protein msh6
ruditapes_c29936	reciprocal meiotic recombination	cell cycle and proliferation	P	DNA mismatch repair protein msh6
ruditapes_c29936	reciprocal meiotic recombination	DNA metabolism	P	DNA mismatch repair protein msh6
ruditapes_c29936	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein msh6
ruditapes_c29936	negative regulation of DNA recombination	DNA metabolism	P	DNA mismatch repair protein msh6
ruditapes_c29936	maintenance of DNA repeat elements	DNA metabolism	P	DNA mismatch repair protein msh6
ruditapes_c30690	"nuclear mRNA cis splicing, via spliceosome"	RNA metabolism	P	Protein saf1
ruditapes_c30690	RNA processing	RNA metabolism	P	Protein saf1
ruditapes2_c1840	chromosome segregation	other biological processes	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	mitotic cell cycle spindle assembly checkpoint	cell cycle and proliferation	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	mitotic cell cycle spindle assembly checkpoint	cell organization and biogenesis	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	gene silencing by RNA	other metabolic processes	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	attachment of spindle microtubules to kinetochore during mitosis	cell cycle and proliferation	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	attachment of spindle microtubules to kinetochore during mitosis	cell organization and biogenesis	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	chromatin silencing by small RNA	RNA metabolism	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	DNA damage checkpoint	cell cycle and proliferation	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	DNA damage checkpoint	signal transduction	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	DNA damage checkpoint	stress response	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	sister chromatid biorientation	cell cycle and proliferation	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	sister chromatid biorientation	cell organization and biogenesis	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	mitotic sister chromatid segregation	cell cycle and proliferation	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	mitotic sister chromatid segregation	cell organization and biogenesis	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	chromatin silencing at centromere	RNA metabolism	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes2_c1840	cell cycle	cell cycle and proliferation	P	Poly(A) RNA polymerase cid12 (PAP) (EC 2.7.7.19) (Caffeine-induced death protein 12) (Polynucleotide adenylyltransferase cid12)
ruditapes_c14631	transport	transport	P	Uncharacterized membrane protein C663.14c
ruditapes2_lrc6148	biological_process	other biological processes	P	Uncharacterized membrane protein C70.04c
ruditapes2_lrc5605	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc4774	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc3509	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s39018	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc36514	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc37609	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc5514	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_c4464	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s37365	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_c4464	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc3509	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc6651	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_c4464	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc36514	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s37365	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s35945	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc36514	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc5514	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s37365	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc6651	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc6651	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc37609	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc4774	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s39018	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc37609	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc3965	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc3965	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_c4464	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc36514	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc3509	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc3509	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc5514	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc5605	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc5514	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s37365	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s39018	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc6651	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc3965	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s35945	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s39018	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc3965	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc5605	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc37609	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s35945	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_s35945	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc5605	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc4774	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc4774	respiratory chain complex III assembly	cell organization and biogenesis	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_c16039	two-component signal transduction system (phosphorelay)	signal transduction	P	Peroxide stress-activated histidine kinase mak3 (EC 2.7.13.3) (His-Asp phosphorelay kinase phk2) (Mcs4-associated kinase 3)
ruditapes_c16039	stress-activated protein kinase signaling pathway	signal transduction	P	Peroxide stress-activated histidine kinase mak3 (EC 2.7.13.3) (His-Asp phosphorelay kinase phk2) (Mcs4-associated kinase 3)
ruditapes_c16039	stress-activated protein kinase signaling pathway	stress response	P	Peroxide stress-activated histidine kinase mak3 (EC 2.7.13.3) (His-Asp phosphorelay kinase phk2) (Mcs4-associated kinase 3)
ruditapes_c16039	phosphorylation	other metabolic processes	P	Peroxide stress-activated histidine kinase mak3 (EC 2.7.13.3) (His-Asp phosphorelay kinase phk2) (Mcs4-associated kinase 3)
ruditapes_c16039	protein amino acid phosphorylation	protein metabolism	P	Peroxide stress-activated histidine kinase mak3 (EC 2.7.13.3) (His-Asp phosphorelay kinase phk2) (Mcs4-associated kinase 3)
ruditapes_c16039	regulation of mitotic cell cycle	cell cycle and proliferation	P	Peroxide stress-activated histidine kinase mak3 (EC 2.7.13.3) (His-Asp phosphorelay kinase phk2) (Mcs4-associated kinase 3)
ruditapes_c16039	peptidyl-histidine phosphorylation	protein metabolism	P	Peroxide stress-activated histidine kinase mak3 (EC 2.7.13.3) (His-Asp phosphorelay kinase phk2) (Mcs4-associated kinase 3)
ruditapes_c16039	cellular response to oxidative stress	stress response	P	Peroxide stress-activated histidine kinase mak3 (EC 2.7.13.3) (His-Asp phosphorelay kinase phk2) (Mcs4-associated kinase 3)
ruditapes_c16039	signal transduction	signal transduction	P	Peroxide stress-activated histidine kinase mak3 (EC 2.7.13.3) (His-Asp phosphorelay kinase phk2) (Mcs4-associated kinase 3)
ruditapes_c16039	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Peroxide stress-activated histidine kinase mak3 (EC 2.7.13.3) (His-Asp phosphorelay kinase phk2) (Mcs4-associated kinase 3)
ruditapes_c16039	regulation of conjugation with cellular fusion	other biological processes	P	Peroxide stress-activated histidine kinase mak3 (EC 2.7.13.3) (His-Asp phosphorelay kinase phk2) (Mcs4-associated kinase 3)
ruditapes_c11739	amino acid transport	transport	P	Uncharacterized amino-acid permease C777.04
ruditapes_c11739	transmembrane transport	transport	P	Uncharacterized amino-acid permease C777.04
ruditapes_c11739	transport	transport	P	Uncharacterized amino-acid permease C777.04
ruditapes2_c4534	TOR signaling pathway	signal transduction	P	Target of rapamycin complex 2 subunit bit61 (TORC2 subunit bit61)
ruditapes_c18413	cell wall biogenesis	other biological processes	P	Cell wall synthesis protein KRE9
ruditapes_c18413	cell wall organization	cell organization and biogenesis	P	Cell wall synthesis protein KRE9
ruditapes_c26619	protein targeting to mitochondrion	transport	P	Mitochondrial import inner membrane translocase subunit TIM9
ruditapes_c26619	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit TIM9
ruditapes_c26619	protein import into mitochondrial inner membrane	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit TIM9
ruditapes_c26619	transport	transport	P	Mitochondrial import inner membrane translocase subunit TIM9
ruditapes_c26619	protein transport	transport	P	Mitochondrial import inner membrane translocase subunit TIM9
ruditapes_c26619	protein import into mitochondrial inner membrane	transport	P	Mitochondrial import inner membrane translocase subunit TIM9
ruditapes_c10522	proteasome localization	other biological processes	P	Postreplication repair E3 ubiquitin-protein ligase rad18 (EC 6.3.2.-) (RAD18 homolog)
ruditapes_c10522	postreplication repair	stress response	P	Postreplication repair E3 ubiquitin-protein ligase rad18 (EC 6.3.2.-) (RAD18 homolog)
ruditapes_c10522	postreplication repair	DNA metabolism	P	Postreplication repair E3 ubiquitin-protein ligase rad18 (EC 6.3.2.-) (RAD18 homolog)
ruditapes_c10522	response to DNA damage stimulus	stress response	P	Postreplication repair E3 ubiquitin-protein ligase rad18 (EC 6.3.2.-) (RAD18 homolog)
ruditapes_c10522	protein ubiquitination	protein metabolism	P	Postreplication repair E3 ubiquitin-protein ligase rad18 (EC 6.3.2.-) (RAD18 homolog)
ruditapes_c10522	DNA repair	stress response	P	Postreplication repair E3 ubiquitin-protein ligase rad18 (EC 6.3.2.-) (RAD18 homolog)
ruditapes_c10522	DNA repair	DNA metabolism	P	Postreplication repair E3 ubiquitin-protein ligase rad18 (EC 6.3.2.-) (RAD18 homolog)
ruditapes_c10522	DNA damage checkpoint	cell cycle and proliferation	P	Postreplication repair E3 ubiquitin-protein ligase rad18 (EC 6.3.2.-) (RAD18 homolog)
ruditapes_c10522	DNA damage checkpoint	signal transduction	P	Postreplication repair E3 ubiquitin-protein ligase rad18 (EC 6.3.2.-) (RAD18 homolog)
ruditapes_c10522	DNA damage checkpoint	stress response	P	Postreplication repair E3 ubiquitin-protein ligase rad18 (EC 6.3.2.-) (RAD18 homolog)
ruditapes_c26863	double-strand break repair via nonhomologous end joining	stress response	P	Paired amphipathic helix protein pst3 (SIN3 homolog 3)
ruditapes_c26863	double-strand break repair via nonhomologous end joining	DNA metabolism	P	Paired amphipathic helix protein pst3 (SIN3 homolog 3)
ruditapes_c26863	chromatin silencing	RNA metabolism	P	Paired amphipathic helix protein pst3 (SIN3 homolog 3)
ruditapes_c26863	chromatin remodeling	cell organization and biogenesis	P	Paired amphipathic helix protein pst3 (SIN3 homolog 3)
ruditapes_c26863	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Paired amphipathic helix protein pst3 (SIN3 homolog 3)
ruditapes_c26863	histone deacetylation	protein metabolism	P	Paired amphipathic helix protein pst3 (SIN3 homolog 3)
ruditapes_c26863	histone deacetylation	cell organization and biogenesis	P	Paired amphipathic helix protein pst3 (SIN3 homolog 3)
ruditapes_c10925	DNA replication	DNA metabolism	P	Origin recognition complex subunit 6
ruditapes_c10925	DNA replication initiation	DNA metabolism	P	Origin recognition complex subunit 6
ruditapes_c10925	pre-replicative complex assembly	DNA metabolism	P	Origin recognition complex subunit 6
ruditapes_c10925	pre-replicative complex assembly	cell organization and biogenesis	P	Origin recognition complex subunit 6
ruditapes_c27989	chromatin silencing at silent mating-type cassette	RNA metabolism	P	Cryptic loci regulator protein 1
ruditapes_c27989	chromatin silencing at rDNA	RNA metabolism	P	Cryptic loci regulator protein 1
ruditapes_c27989	chromatin silencing	RNA metabolism	P	Cryptic loci regulator protein 1
ruditapes_c27989	chromatin modification	cell organization and biogenesis	P	Cryptic loci regulator protein 1
ruditapes_c27989	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Cryptic loci regulator protein 1
ruditapes_c27989	chromatin silencing at centromere	RNA metabolism	P	Cryptic loci regulator protein 1
ruditapes_c27261	oxidation reduction	other metabolic processes	P	Ubiquinone biosynthesis protein coq7 (Coenzyme Q biosynthesis protein 7)
ruditapes_c27261	ubiquinone biosynthetic process	other metabolic processes	P	Ubiquinone biosynthesis protein coq7 (Coenzyme Q biosynthesis protein 7)
ruditapes_c31693	protein folding	protein metabolism	P	Uncharacterized protein C18.17c
ruditapes_c31693	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Uncharacterized protein C18.17c
ruditapes_c13317	cellular response to oxidative stress	stress response	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c13317	protein folding	protein metabolism	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c29032	removal of superoxide radicals	other metabolic processes	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c13317	hydrogen peroxide catabolic process	stress response	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c13317	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c13317	regulation of gene expression	other metabolic processes	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c29032	protein folding	protein metabolism	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c29032	cellular response to oxidative stress	stress response	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c29032	cell redox homeostasis	other biological processes	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c13317	removal of superoxide radicals	other metabolic processes	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c13317	cell redox homeostasis	other biological processes	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c29032	hydrogen peroxide catabolic process	stress response	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c29032	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c29032	regulation of gene expression	other metabolic processes	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c29032	oxidation reduction	other metabolic processes	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c13317	oxidation reduction	other metabolic processes	P	Peroxiredoxin tpx1 (EC 1.11.1.15) (Peroxiredoxin tsa1) (Thioredoxin peroxidase)
ruditapes_c8589	transmembrane transport	transport	P	Uncharacterized MFS-type transporter C613.02
ruditapes_c8589	transport	transport	P	Uncharacterized MFS-type transporter C613.02
ruditapes_c9979	fatty acid beta-oxidation	other metabolic processes	P	Acyl-coenzyme A oxidase 1 (Acyl-CoA oxidase 1) (EC 1.3.3.6)
ruditapes_c9979	fatty acid metabolic process	other metabolic processes	P	Acyl-coenzyme A oxidase 1 (Acyl-CoA oxidase 1) (EC 1.3.3.6)
ruditapes_c9979	metabolic process	other metabolic processes	P	Acyl-coenzyme A oxidase 1 (Acyl-CoA oxidase 1) (EC 1.3.3.6)
ruditapes_c9979	oxidation reduction	other metabolic processes	P	Acyl-coenzyme A oxidase 1 (Acyl-CoA oxidase 1) (EC 1.3.3.6)
ruditapes_c9979	lipid metabolic process	other metabolic processes	P	Acyl-coenzyme A oxidase 1 (Acyl-CoA oxidase 1) (EC 1.3.3.6)
ruditapes_c4380	peroxisome organization	cell organization and biogenesis	P	Peroxisomal ATPase pex1 (Peroxin-1) (Peroxisome biogenesis protein pex1)
ruditapes_c4380	organelle organization	cell organization and biogenesis	P	Peroxisomal ATPase pex1 (Peroxin-1) (Peroxisome biogenesis protein pex1)
ruditapes_c4380	ATP catabolic process	other metabolic processes	P	Peroxisomal ATPase pex1 (Peroxin-1) (Peroxisome biogenesis protein pex1)
ruditapes2_c2698	biological_process	other biological processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-2) (Phosphoinositide phospholipase C-like 4) (PLC-L4) (Phospholipase C-like protein 4) (Phospholipase C-eta-2) (PLC-eta2)"
ruditapes2_c2698	lipid catabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-2) (Phosphoinositide phospholipase C-like 4) (PLC-L4) (Phospholipase C-like protein 4) (Phospholipase C-eta-2) (PLC-eta2)"
ruditapes2_c2698	signal transduction	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-2) (Phosphoinositide phospholipase C-like 4) (PLC-L4) (Phospholipase C-like protein 4) (Phospholipase C-eta-2) (PLC-eta2)"
ruditapes2_c2698	phosphatidylinositol metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-2) (Phosphoinositide phospholipase C-like 4) (PLC-L4) (Phospholipase C-like protein 4) (Phospholipase C-eta-2) (PLC-eta2)"
ruditapes2_c2698	lipid metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-2) (Phosphoinositide phospholipase C-like 4) (PLC-L4) (Phospholipase C-like protein 4) (Phospholipase C-eta-2) (PLC-eta2)"
ruditapes_c34994	forebrain morphogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	negative regulation of axon extension involved in axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	negative regulation of axon extension involved in axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	spinal cord development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	nervous system development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	negative chemotaxis	other biological processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	multicellular organismal development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	negative regulation of synaptogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	negative regulation of synaptogenesis	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	negative regulation of synaptogenesis	cell-cell signaling	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	tangential migration from the subventricular zone to the olfactory bulb	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	negative chemotaxis	other biological processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	neuron projection morphogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	neuron projection morphogenesis	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	establishment of nucleus localization	other biological processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	negative regulation of synaptogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	negative regulation of synaptogenesis	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	negative regulation of synaptogenesis	cell-cell signaling	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	nervous system development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	telencephalon cell migration	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	establishment of nucleus localization	other biological processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	retinal ganglion cell axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	retinal ganglion cell axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	multicellular organismal development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	tangential migration from the subventricular zone to the olfactory bulb	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	olfactory bulb development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	motor axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	spinal cord development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	telencephalon cell migration	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	chemorepulsion involved in embryonic olfactory bulb interneuron migration	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	axon extension involved in axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	axon extension involved in axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	motor axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	motor axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	nervous system development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	cell differentiation	other biological processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	tangential migration from the subventricular zone to the olfactory bulb	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	motor axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	negative regulation of axon extension involved in axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	negative regulation of axon extension involved in axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	axonogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	axonogenesis	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	negative chemotaxis	other biological processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	brain development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	dorsal/ventral axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	neuron projection morphogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	neuron projection morphogenesis	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	forebrain morphogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	cell differentiation	other biological processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	retinal ganglion cell axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	retinal ganglion cell axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	olfactory bulb development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	dorsal/ventral axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	motor axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	motor axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	spinal cord development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	cell differentiation	other biological processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	chemorepulsion involved in embryonic olfactory bulb interneuron migration	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	olfactory bulb development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	axon extension involved in axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	axon extension involved in axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	negative regulation of axon extension involved in axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	negative regulation of axon extension involved in axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	forebrain morphogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	brain development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	chemorepulsion involved in embryonic olfactory bulb interneuron migration	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	establishment of nucleus localization	other biological processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	telencephalon cell migration	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	axonogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	axonogenesis	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	multicellular organismal development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	axon extension involved in axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	axon extension involved in axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	axonogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	axonogenesis	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	dorsal/ventral axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	dorsal/ventral axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	negative regulation of synaptogenesis	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	negative regulation of synaptogenesis	cell-cell signaling	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	neuron projection morphogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	neuron projection morphogenesis	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	retinal ganglion cell axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	retinal ganglion cell axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	dorsal/ventral axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c21311	dorsal/ventral axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	brain development	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	axon guidance	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes2_c3329	axon guidance	cell organization and biogenesis	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c34994	negative regulation of synaptogenesis	developmental processes	P	Slit homolog 1 protein (Slit-1) (Multiple epidermal growth factor-like domains protein 4) (Multiple EGF-like domains protein 4)
ruditapes_c18966	negative chemotaxis	other biological processes	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	nervous system development	developmental processes	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	multicellular organismal development	developmental processes	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	axon guidance	developmental processes	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	axon guidance	cell organization and biogenesis	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	cell differentiation	other biological processes	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	cellular response to hormone stimulus	other biological processes	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	response to cortisol stimulus	other biological processes	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	negative regulation of chemokine-mediated signaling pathway	signal transduction	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	axon extension involved in axon guidance	developmental processes	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	axon extension involved in axon guidance	cell organization and biogenesis	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	chemorepulsion involved in embryonic olfactory bulb interneuron migration	developmental processes	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18966	negative regulation of cell growth	other biological processes	P	Slit homolog 3 protein (Slit-3) (Multiple epidermal growth factor-like domains protein 5) (Multiple EGF-like domains protein 5)
ruditapes_c18259	nuclear-transcribed mRNA poly(A) tail shortening	RNA metabolism	P	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) (Leukocyte receptor cluster member 2)
ruditapes_c18259	gene expression	other metabolic processes	P	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) (Leukocyte receptor cluster member 2)
ruditapes_c18259	RNA metabolic process	RNA metabolism	P	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) (Leukocyte receptor cluster member 2)
ruditapes_c18259	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) (Leukocyte receptor cluster member 2)
ruditapes_c18259	"transcription, DNA-dependent"	RNA metabolism	P	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) (Leukocyte receptor cluster member 2)
ruditapes_c18259	mRNA metabolic process	RNA metabolism	P	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) (Leukocyte receptor cluster member 2)
ruditapes_c18259	"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay"	RNA metabolism	P	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) (Leukocyte receptor cluster member 2)
ruditapes_c22074	D-xylose metabolic process	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c22074	xylulose catabolic process	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c22074	phosphorylation	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c22074	carbohydrate metabolic process	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c22074	generation of precursor metabolites and energy	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c17709	signal transduction	signal transduction	P	Zinc finger protein ZPR1 (Zinc finger protein 259)
ruditapes_c17709	cell proliferation	cell cycle and proliferation	P	Zinc finger protein ZPR1 (Zinc finger protein 259)
ruditapes_c17012	cyclic nucleotide biosynthetic process	other metabolic processes	P	Guanylate cyclase soluble subunit beta-2 (GCS-beta-2) (EC 4.6.1.2)
ruditapes_c17012	blood coagulation	stress response	P	Guanylate cyclase soluble subunit beta-2 (GCS-beta-2) (EC 4.6.1.2)
ruditapes_c17012	cGMP biosynthetic process	other metabolic processes	P	Guanylate cyclase soluble subunit beta-2 (GCS-beta-2) (EC 4.6.1.2)
ruditapes2_lrc2359	transport	transport	P	Large neutral amino acids transporter small subunit 3 (L-type amino acid transporter 3) (Prostate cancer overexpressed gene 1 protein) (Solute carrier family 43 member 1)
ruditapes2_lrc2359	neutral amino acid transport	transport	P	Large neutral amino acids transporter small subunit 3 (L-type amino acid transporter 3) (Prostate cancer overexpressed gene 1 protein) (Solute carrier family 43 member 1)
ruditapes2_lrc2359	ion transport	transport	P	Large neutral amino acids transporter small subunit 3 (L-type amino acid transporter 3) (Prostate cancer overexpressed gene 1 protein) (Solute carrier family 43 member 1)
ruditapes2_lrc2359	amino acid transport	transport	P	Large neutral amino acids transporter small subunit 3 (L-type amino acid transporter 3) (Prostate cancer overexpressed gene 1 protein) (Solute carrier family 43 member 1)
ruditapes2_lrc2359	transmembrane transport	transport	P	Large neutral amino acids transporter small subunit 3 (L-type amino acid transporter 3) (Prostate cancer overexpressed gene 1 protein) (Solute carrier family 43 member 1)
ruditapes2_lrc2359	L-amino acid transport	transport	P	Large neutral amino acids transporter small subunit 3 (L-type amino acid transporter 3) (Prostate cancer overexpressed gene 1 protein) (Solute carrier family 43 member 1)
ruditapes_c28437	cell division	other biological processes	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_lrc15100	mRNA processing	RNA metabolism	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_lrc15100	cell migration	other biological processes	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_c28437	cell migration	other biological processes	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_c28437	cytoskeleton organization	cell organization and biogenesis	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_lrc15100	cell cycle	cell cycle and proliferation	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_c28437	cell cycle	cell cycle and proliferation	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_lrc15100	cytoskeleton organization	cell organization and biogenesis	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_lrc15100	regulation of cytokinesis	other biological processes	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_c28437	regulation of cytokinesis	other biological processes	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_lrc15100	regulation of cell shape	cell organization and biogenesis	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_lrc15100	cell division	other biological processes	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_c28437	mRNA processing	RNA metabolism	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_lrc15100	RNA splicing	RNA metabolism	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_c28437	regulation of cell shape	cell organization and biogenesis	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes_c28437	RNA splicing	RNA metabolism	P	Pre-mRNA-processing factor 40 homolog A (Fas ligand-associated factor 1) (Formin-binding protein 11) (Formin-binding protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein 10) (HIP-10) (Huntingtin-interacting protein A) (Renal carcinoma antigen NY-REN-6)
ruditapes2_c645	protein transport	transport	P	Metaxin-2 (Mitochondrial outer membrane import complex protein 2)
ruditapes2_c645	mitochondrial transport	transport	P	Metaxin-2 (Mitochondrial outer membrane import complex protein 2)
ruditapes2_c645	transport	transport	P	Metaxin-2 (Mitochondrial outer membrane import complex protein 2)
ruditapes2_c645	protein targeting to mitochondrion	transport	P	Metaxin-2 (Mitochondrial outer membrane import complex protein 2)
ruditapes2_c645	protein targeting to mitochondrion	cell organization and biogenesis	P	Metaxin-2 (Mitochondrial outer membrane import complex protein 2)
ruditapes2_c1656	proteolysis	protein metabolism	P	Mitochondrial-processing peptidase subunit beta (EC 3.4.24.64) (Beta-MPP) (P-52)
ruditapes2_c45	cell-matrix adhesion	cell adhesion	P	Alpha-tectorin
ruditapes_c6640	sensory perception of sound	other biological processes	P	Alpha-tectorin
ruditapes_c10331	sensory perception of sound	other biological processes	P	Alpha-tectorin
ruditapes2_c45	sensory perception of sound	other biological processes	P	Alpha-tectorin
ruditapes_c10331	cell-matrix adhesion	cell adhesion	P	Alpha-tectorin
ruditapes_c6640	cell-matrix adhesion	cell adhesion	P	Alpha-tectorin
ruditapes_c10347	sensory perception of sound	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c2158	maintenance of organ identity	developmental processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c2158	visual perception	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c10347	maintenance of organ identity	developmental processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c2158	sensory perception of sound	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c6975	inner ear receptor cell differentiation	developmental processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c6975	response to stimulus	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c2158	sensory perception of light stimulus	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c10347	visual perception	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c10347	response to stimulus	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c2158	inner ear receptor cell differentiation	developmental processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c2158	response to stimulus	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c6975	photoreceptor cell maintenance	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c6975	maintenance of organ identity	developmental processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c6975	visual perception	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c6975	sensory perception of light stimulus	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c2158	photoreceptor cell maintenance	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c10347	inner ear receptor cell differentiation	developmental processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c6975	sensory perception of sound	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c10347	photoreceptor cell maintenance	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c10347	sensory perception of light stimulus	other biological processes	P	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)
ruditapes_c7326	signal transduction	signal transduction	P	Leucine-rich repeat-containing G-protein coupled receptor 5 (G-protein coupled receptor 49) (G-protein coupled receptor 67) (G-protein coupled receptor HG38)
ruditapes_c7326	G-protein coupled receptor protein signaling pathway	signal transduction	P	Leucine-rich repeat-containing G-protein coupled receptor 5 (G-protein coupled receptor 49) (G-protein coupled receptor 67) (G-protein coupled receptor HG38)
ruditapes_c16339	cell death	death	P	Ceroid-lipofuscinosis neuronal protein 5 (Protein CLN5)
ruditapes_c16339	protein catabolic process	protein metabolism	P	Ceroid-lipofuscinosis neuronal protein 5 (Protein CLN5)
ruditapes_c16339	lysosomal lumen acidification	cell organization and biogenesis	P	Ceroid-lipofuscinosis neuronal protein 5 (Protein CLN5)
ruditapes_c16339	lysosome organization	cell organization and biogenesis	P	Ceroid-lipofuscinosis neuronal protein 5 (Protein CLN5)
ruditapes_c16339	neuron maturation	developmental processes	P	Ceroid-lipofuscinosis neuronal protein 5 (Protein CLN5)
ruditapes_c16339	neurogenesis	developmental processes	P	Ceroid-lipofuscinosis neuronal protein 5 (Protein CLN5)
ruditapes_c16339	visual perception	other biological processes	P	Ceroid-lipofuscinosis neuronal protein 5 (Protein CLN5)
ruditapes_c16339	brain development	developmental processes	P	Ceroid-lipofuscinosis neuronal protein 5 (Protein CLN5)
ruditapes_c8225	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Heat shock factor-binding protein 1 (Nasopharyngeal carcinoma-associated antigen 13) (NPC-A-13)
ruditapes_c8225	muscle contraction	other biological processes	P	Heat shock factor-binding protein 1 (Nasopharyngeal carcinoma-associated antigen 13) (NPC-A-13)
ruditapes_c30217	biological_process	other biological processes	P	Mammaglobin-B (Lacryglobin) (Lipophilin-C) (Mammaglobin-2) (Secretoglobin family 2A member 1)
ruditapes_c6053	cell morphogenesis involved in neuron differentiation	developmental processes	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c6053	cell morphogenesis involved in neuron differentiation	cell organization and biogenesis	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c6053	central nervous system projection neuron axonogenesis	developmental processes	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c6053	central nervous system projection neuron axonogenesis	cell organization and biogenesis	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c6053	branchiomotor neuron axon guidance	developmental processes	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c6053	branchiomotor neuron axon guidance	cell organization and biogenesis	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c6053	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c6053	regulation of cytoskeleton organization	cell organization and biogenesis	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c6053	regulation of protein localization	other biological processes	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c6053	motor axon guidance	developmental processes	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c6053	motor axon guidance	cell organization and biogenesis	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c6053	"transcription, DNA-dependent"	RNA metabolism	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes2_c2296	defense response to bacterium	stress response	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c826	defense response to Gram-positive bacterium	stress response	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c826	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c826	detection of bacterium	other biological processes	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c826	peptidoglycan catabolic process	other metabolic processes	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c2296	defense response to Gram-positive bacterium	stress response	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c2296	peptidoglycan catabolic process	other metabolic processes	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c2296	detection of bacterium	other biological processes	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c2296	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c2296	immune response	other biological processes	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c826	immune response	other biological processes	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c826	innate immune response	stress response	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c2296	innate immune response	stress response	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes2_c826	defense response to bacterium	stress response	P	Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S)
ruditapes_c12218	skeletal system development	developmental processes	P	C-type lectin domain family 3 member A (C-type lectin superfamily member 1) (Cartilage-derived C-type lectin)
ruditapes2_c1048	signal transduction	signal transduction	P	Ficolin-3 (Collagen/fibrinogen domain-containing lectin 3 p35) (Collagen/fibrinogen domain-containing protein 3) (Hakata antigen)
ruditapes2_c1048	"complement activation, lectin pathway"	stress response	P	Ficolin-3 (Collagen/fibrinogen domain-containing lectin 3 p35) (Collagen/fibrinogen domain-containing protein 3) (Hakata antigen)
ruditapes2_c1048	"complement activation, lectin pathway"	protein metabolism	P	Ficolin-3 (Collagen/fibrinogen domain-containing lectin 3 p35) (Collagen/fibrinogen domain-containing protein 3) (Hakata antigen)
ruditapes2_c1048	innate immune response	stress response	P	Ficolin-3 (Collagen/fibrinogen domain-containing lectin 3 p35) (Collagen/fibrinogen domain-containing protein 3) (Hakata antigen)
ruditapes_c28763	glucose transport	transport	P	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)
ruditapes_c28763	regulation of glucose transport	transport	P	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)
ruditapes_c28763	viral reproduction	other biological processes	P	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)
ruditapes_c28763	hexose transport	transport	P	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)
ruditapes_c28763	transmembrane transport	transport	P	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)
ruditapes_c28763	mRNA transport	transport	P	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)
ruditapes_c28763	protein transport	transport	P	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)
ruditapes_c28763	transport	transport	P	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)
ruditapes_c28763	carbohydrate metabolic process	other metabolic processes	P	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)
ruditapes_c28763	cytokine-mediated signaling pathway	signal transduction	P	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)
ruditapes_c28763	nucleocytoplasmic transport	transport	P	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)
ruditapes_c6616	in utero embryonic development	developmental processes	P	Gap junction beta-3 protein (Connexin-31) (Cx31)
ruditapes_c6616	skin development	developmental processes	P	Gap junction beta-3 protein (Connexin-31) (Cx31)
ruditapes_c6616	placenta development	developmental processes	P	Gap junction beta-3 protein (Connexin-31) (Cx31)
ruditapes_c6616	sensory perception of sound	other biological processes	P	Gap junction beta-3 protein (Connexin-31) (Cx31)
ruditapes_c6616	cell communication	other biological processes	P	Gap junction beta-3 protein (Connexin-31) (Cx31)
ruditapes_lrc24940	spermatogenesis	other biological processes	P	Cartilage-associated protein
ruditapes2_c2376	RNA catabolic process	RNA metabolism	P	Ribonuclease H2 subunit A (RNase H2 subunit A) (EC 3.1.26.4) (Aicardi-Goutieres syndrome 4 protein) (AGS4) (RNase H(35)) (Ribonuclease HI large subunit) (RNase HI large subunit) (Ribonuclease HI subunit A)
ruditapes2_c2376	DNA replication	DNA metabolism	P	Ribonuclease H2 subunit A (RNase H2 subunit A) (EC 3.1.26.4) (Aicardi-Goutieres syndrome 4 protein) (AGS4) (RNase H(35)) (Ribonuclease HI large subunit) (RNase HI large subunit) (Ribonuclease HI subunit A)
ruditapes2_c2376	RNA metabolic process	RNA metabolism	P	Ribonuclease H2 subunit A (RNase H2 subunit A) (EC 3.1.26.4) (Aicardi-Goutieres syndrome 4 protein) (AGS4) (RNase H(35)) (Ribonuclease HI large subunit) (RNase HI large subunit) (Ribonuclease HI subunit A)
ruditapes_c27639	lipid metabolic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c27639	cholesterol biosynthetic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c24830	oxidation reduction	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c24830	steroid biosynthetic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c24830	cholesterol biosynthetic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c27639	lipid biosynthetic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c27639	oxidation reduction	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c24830	cholesterol biosynthetic process via lathosterol	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c27639	steroid biosynthetic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c24830	lipid biosynthetic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c24830	lipid metabolic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c27639	sterol biosynthetic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c24830	fatty acid biosynthetic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c27639	fatty acid biosynthetic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c24830	sterol biosynthetic process	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes_c27639	cholesterol biosynthetic process via lathosterol	other metabolic processes	P	Lathosterol oxidase (EC 1.14.21.6) (C-5 sterol desaturase) (Delta(7)-sterol 5-desaturase) (Lathosterol 5-desaturase) (Sterol-C5-desaturase)
ruditapes2_lrc6827	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes_lrc32600	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes2_c3926	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes_lrc33259	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes_c29881	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes_lrc32486	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes_s38856	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes2_lrc4455	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes_lrc38774	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes_lrc33339	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes_lrc38106	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes_s34222	regulation of cell proliferation	cell cycle and proliferation	P	Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)
ruditapes_c7188	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase 1C4 (ST1C4) (EC 2.8.2.-) (Sulfotransferase 1C2) (SULT1C#2)
ruditapes_c7188	sulfation	other metabolic processes	P	Sulfotransferase 1C4 (ST1C4) (EC 2.8.2.-) (Sulfotransferase 1C2) (SULT1C#2)
ruditapes_c7188	3'-phosphoadenosine 5'-phosphosulfate metabolic process	other metabolic processes	P	Sulfotransferase 1C4 (ST1C4) (EC 2.8.2.-) (Sulfotransferase 1C2) (SULT1C#2)
ruditapes_c28883	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase 1C4 (ST1C4) (EC 2.8.2.-) (Sulfotransferase 1C2) (SULT1C#2)
ruditapes_c28883	sulfation	other metabolic processes	P	Sulfotransferase 1C4 (ST1C4) (EC 2.8.2.-) (Sulfotransferase 1C2) (SULT1C#2)
ruditapes_c28883	3'-phosphoadenosine 5'-phosphosulfate metabolic process	other metabolic processes	P	Sulfotransferase 1C4 (ST1C4) (EC 2.8.2.-) (Sulfotransferase 1C2) (SULT1C#2)
ruditapes_c14121	G-protein coupled receptor protein signaling pathway	signal transduction	P	Gamma-aminobutyric acid type B receptor subunit 2 (GABA-B receptor 2) (GABA-B-R2) (GABA-BR2) (GABABR2) (Gb2) (G-protein coupled receptor 51) (HG20)
ruditapes_c14121	gamma-aminobutyric acid signaling pathway	signal transduction	P	Gamma-aminobutyric acid type B receptor subunit 2 (GABA-B receptor 2) (GABA-B-R2) (GABA-BR2) (GABABR2) (Gb2) (G-protein coupled receptor 51) (HG20)
ruditapes_c14121	synaptic transmission	cell-cell signaling	P	Gamma-aminobutyric acid type B receptor subunit 2 (GABA-B receptor 2) (GABA-B-R2) (GABA-BR2) (GABABR2) (Gb2) (G-protein coupled receptor 51) (HG20)
ruditapes_c14121	signal transduction	signal transduction	P	Gamma-aminobutyric acid type B receptor subunit 2 (GABA-B receptor 2) (GABA-B-R2) (GABA-BR2) (GABABR2) (Gb2) (G-protein coupled receptor 51) (HG20)
ruditapes_c14121	negative regulation of adenylate cyclase activity	other metabolic processes	P	Gamma-aminobutyric acid type B receptor subunit 2 (GABA-B receptor 2) (GABA-B-R2) (GABA-BR2) (GABABR2) (Gb2) (G-protein coupled receptor 51) (HG20)
ruditapes_lrc19146	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc19146	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34939	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc4897	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35437	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35941	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37008	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34430	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5395	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35437	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s39595	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc3900	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc3900	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34085	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34085	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5230	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc39463	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc39463	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34430	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc39463	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37008	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34210	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34210	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34939	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc6162	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37314	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5230	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc19146	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35176	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37008	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35165	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc38852	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35165	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc38852	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc4897	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37314	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37314	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc4897	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s38330	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s38330	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37008	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37008	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35437	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35437	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5395	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34939	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34939	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34430	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34430	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34085	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc38852	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc38852	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc38852	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35437	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc6162	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34210	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s39595	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5230	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5395	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5395	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5395	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35165	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34085	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc19146	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5230	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35941	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s38330	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc39463	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5836	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35176	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35176	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc4897	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc4897	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35437	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34939	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc19146	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5230	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc4897	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc4897	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc6162	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc3900	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34085	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc6162	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc6162	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34939	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34210	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35176	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35941	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5230	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc3900	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc4897	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s39595	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37314	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34430	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5836	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35941	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35941	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s38330	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc38852	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35176	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5836	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5836	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s39595	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5230	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35437	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37314	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35165	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35165	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5395	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc3900	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc3900	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s39595	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34939	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34939	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5230	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5395	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35941	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc6162	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s39595	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34430	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34430	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc19146	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35176	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37314	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc4897	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s39595	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35176	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5230	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34430	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s38330	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35165	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37008	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc19146	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s38330	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34085	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34085	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34210	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34210	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc6162	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc19146	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc19146	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35165	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35941	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35941	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc6162	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc38852	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5836	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5836	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc4897	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5395	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc19146	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5836	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35176	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35176	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc3900	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35165	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35165	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc39463	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc39463	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s39595	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s39595	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34085	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34210	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34939	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s38330	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc3900	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34085	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35176	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc3900	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34085	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc39463	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34430	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37314	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37314	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37008	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37008	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s38330	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37314	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc39463	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34210	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34210	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34210	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37314	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35437	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s39595	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc3900	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5836	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37008	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc38852	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc38852	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc38852	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5836	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s38330	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s38330	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc39463	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc39463	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34430	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35941	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5395	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5395	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc34939	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35437	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35437	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35165	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37008	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35941	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc6162	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc6162	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5836	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc5230	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_c22294	interspecies interaction between organisms	other biological processes	P	Multiple PDZ domain protein (Multi-PDZ domain protein 1)
ruditapes_c27837	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 2J2 (Hs6M1-6) (Olfactory receptor 6-8) (OR6-8) (Olfactory receptor OR6-19)
ruditapes_c27837	signal transduction	signal transduction	P	Olfactory receptor 2J2 (Hs6M1-6) (Olfactory receptor 6-8) (OR6-8) (Olfactory receptor OR6-19)
ruditapes_c27837	response to stimulus	other biological processes	P	Olfactory receptor 2J2 (Hs6M1-6) (Olfactory receptor 6-8) (OR6-8) (Olfactory receptor OR6-19)
ruditapes_c27837	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 2J2 (Hs6M1-6) (Olfactory receptor 6-8) (OR6-8) (Olfactory receptor OR6-19)
ruditapes_c27837	sensory perception of smell	other biological processes	P	Olfactory receptor 2J2 (Hs6M1-6) (Olfactory receptor 6-8) (OR6-8) (Olfactory receptor OR6-19)
ruditapes_c22367	negative regulation of cardiac muscle hypertrophy	other biological processes	P	Glutaredoxin-3 (PKC-interacting cousin of thioredoxin) (PICOT) (PKC-theta-interacting protein) (PKCq-interacting protein) (Thioredoxin-like protein 2)
ruditapes_c22367	regulation of the force of heart contraction	other biological processes	P	Glutaredoxin-3 (PKC-interacting cousin of thioredoxin) (PICOT) (PKC-theta-interacting protein) (PKCq-interacting protein) (Thioredoxin-like protein 2)
ruditapes_c22367	cell redox homeostasis	other biological processes	P	Glutaredoxin-3 (PKC-interacting cousin of thioredoxin) (PICOT) (PKC-theta-interacting protein) (PKCq-interacting protein) (Thioredoxin-like protein 2)
ruditapes_lrc7760	glucose homeostasis	other biological processes	P	Wolframin
ruditapes_lrc7760	negative regulation of apoptosis	death	P	Wolframin
ruditapes_lrc7760	protein maturation by protein folding	protein metabolism	P	Wolframin
ruditapes_lrc7760	calcium ion homeostasis	other biological processes	P	Wolframin
ruditapes_lrc7760	ER-associated protein catabolic process	protein metabolism	P	Wolframin
ruditapes_lrc7760	negative regulation of neuron apoptosis	death	P	Wolframin
ruditapes_lrc7760	renal water homeostasis	other biological processes	P	Wolframin
ruditapes_lrc7760	protein stabilization	protein metabolism	P	Wolframin
ruditapes_lrc7760	endoplasmic reticulum calcium ion homeostasis	other biological processes	P	Wolframin
ruditapes_lrc7760	positive regulation of proteolysis	protein metabolism	P	Wolframin
ruditapes_lrc7760	positive regulation of protein metabolic process	protein metabolism	P	Wolframin
ruditapes_lrc7760	activation of signaling protein activity involved in unfolded protein response	other metabolic processes	P	Wolframin
ruditapes_lrc7760	positive regulation of protein ubiquitination	protein metabolism	P	Wolframin
ruditapes_lrc7760	negative regulation of programmed cell death	death	P	Wolframin
ruditapes_lrc7760	neurological system process	other biological processes	P	Wolframin
ruditapes_lrc7760	sensory perception of sound	other biological processes	P	Wolframin
ruditapes_lrc7760	negative regulation of transcription factor activity	RNA metabolism	P	Wolframin
ruditapes_lrc7760	endoplasmic reticulum unfolded protein response	stress response	P	Wolframin
ruditapes_lrc7760	kidney development	developmental processes	P	Wolframin
ruditapes_lrc7760	regulation of apoptosis	death	P	Wolframin
ruditapes_lrc7760	response to endoplasmic reticulum stress	stress response	P	Wolframin
ruditapes_lrc7760	activation of signaling protein activity involved in unfolded protein response	signal transduction	P	Wolframin
ruditapes_lrc7760	activation of signaling protein activity involved in unfolded protein response	stress response	P	Wolframin
ruditapes_lrc7760	ER overload response	signal transduction	P	Wolframin
ruditapes_lrc7760	ER overload response	stress response	P	Wolframin
ruditapes_lrc7760	visual perception	other biological processes	P	Wolframin
ruditapes_lrc7760	positive regulation of calcium ion transport	transport	P	Wolframin
ruditapes_lrc7760	positive regulation of growth	other biological processes	P	Wolframin
ruditapes_lrc7760	endoplasmic reticulum unfolded protein response	signal transduction	P	Wolframin
ruditapes_c14322	cell cycle	cell cycle and proliferation	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c14322	positive regulation of Rac GTPase activity	signal transduction	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c14322	protein amino acid phosphorylation	protein metabolism	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c14322	protein amino acid autophosphorylation	protein metabolism	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c14322	positive regulation of dendrite morphogenesis	developmental processes	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c14322	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c14322	positive regulation of axon extension	developmental processes	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c14322	positive regulation of axon extension	cell organization and biogenesis	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c14322	neuron migration	developmental processes	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c14322	regulation of dendrite development	developmental processes	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c14322	regulation of dendrite development	cell organization and biogenesis	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c14322	phosphorylation	other metabolic processes	P	Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine-protein kinase 9)
ruditapes_c17711	positive regulation of cell proliferation	cell cycle and proliferation	P	Probable cytosolic iron-sulfur protein assembly protein CIAO1 (WD repeat-containing protein 39)
ruditapes_c17711	chromosome segregation	other biological processes	P	Probable cytosolic iron-sulfur protein assembly protein CIAO1 (WD repeat-containing protein 39)
ruditapes_c17711	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Probable cytosolic iron-sulfur protein assembly protein CIAO1 (WD repeat-containing protein 39)
ruditapes_c17711	iron-sulfur cluster assembly	other metabolic processes	P	Probable cytosolic iron-sulfur protein assembly protein CIAO1 (WD repeat-containing protein 39)
ruditapes_c18050	SRP-dependent cotranslational protein targeting to membrane	transport	P	Signal recognition particle subunit SRP72 (SRP72) (Signal recognition particle 72 kDa protein)
ruditapes_c18050	gene expression	other metabolic processes	P	Signal recognition particle subunit SRP72 (SRP72) (Signal recognition particle 72 kDa protein)
ruditapes_c18050	translation	protein metabolism	P	Signal recognition particle subunit SRP72 (SRP72) (Signal recognition particle 72 kDa protein)
ruditapes_c18050	response to drug	other biological processes	P	Signal recognition particle subunit SRP72 (SRP72) (Signal recognition particle 72 kDa protein)
ruditapes_c18050	cellular protein metabolic process	protein metabolism	P	Signal recognition particle subunit SRP72 (SRP72) (Signal recognition particle 72 kDa protein)
ruditapes_c9051	regulation of cell proliferation	cell cycle and proliferation	P	Protein JTB (Jumping translocation breakpoint protein) (Prostate androgen-regulated protein) (PAR protein)
ruditapes_c9051	negative regulation of apoptosis	death	P	Protein JTB (Jumping translocation breakpoint protein) (Prostate androgen-regulated protein) (PAR protein)
ruditapes_c9051	cell cycle	cell cycle and proliferation	P	Protein JTB (Jumping translocation breakpoint protein) (Prostate androgen-regulated protein) (PAR protein)
ruditapes_c9051	cytokinesis during cell cycle	cell cycle and proliferation	P	Protein JTB (Jumping translocation breakpoint protein) (Prostate androgen-regulated protein) (PAR protein)
ruditapes_c9051	positive regulation of protein kinase activity	other metabolic processes	P	Protein JTB (Jumping translocation breakpoint protein) (Prostate androgen-regulated protein) (PAR protein)
ruditapes_c9051	cell division	other biological processes	P	Protein JTB (Jumping translocation breakpoint protein) (Prostate androgen-regulated protein) (PAR protein)
ruditapes_c9051	mitosis	cell cycle and proliferation	P	Protein JTB (Jumping translocation breakpoint protein) (Prostate androgen-regulated protein) (PAR protein)
ruditapes_c9051	mitosis	cell organization and biogenesis	P	Protein JTB (Jumping translocation breakpoint protein) (Prostate androgen-regulated protein) (PAR protein)
ruditapes_c9051	apoptosis	death	P	Protein JTB (Jumping translocation breakpoint protein) (Prostate androgen-regulated protein) (PAR protein)
ruditapes_c17006	cysteine biosynthetic process	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT)
ruditapes_c17006	cellular amino acid biosynthetic process	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT)
ruditapes_c17006	methionine biosynthetic process	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT)
ruditapes_c17006	sulfate assimilation	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT)
ruditapes2_c6215	translation	protein metabolism	P	60S ribosomal protein L5
ruditapes_lrc32657	chitin metabolic process	other metabolic processes	P	Peritrophin-1 (AgAper-1) (Peritrophic matrix protein 1) (Peritrophin A)
ruditapes_lrc31098	chitin metabolic process	other metabolic processes	P	Peritrophin-1 (AgAper-1) (Peritrophic matrix protein 1) (Peritrophin A)
ruditapes2_c5442	chitin metabolic process	other metabolic processes	P	Peritrophin-1 (AgAper-1) (Peritrophic matrix protein 1) (Peritrophin A)
ruditapes2_c210	chitin metabolic process	other metabolic processes	P	Peritrophin-1 (AgAper-1) (Peritrophic matrix protein 1) (Peritrophin A)
ruditapes_lrc35765	chitin metabolic process	other metabolic processes	P	Peritrophin-1 (AgAper-1) (Peritrophic matrix protein 1) (Peritrophin A)
ruditapes_c8308	chitin metabolic process	other metabolic processes	P	Peritrophin-1 (AgAper-1) (Peritrophic matrix protein 1) (Peritrophin A)
ruditapes_c2254	chitin metabolic process	other metabolic processes	P	Peritrophin-1 (AgAper-1) (Peritrophic matrix protein 1) (Peritrophin A)
ruditapes_c8295	chitin metabolic process	other metabolic processes	P	Peritrophin-1 (AgAper-1) (Peritrophic matrix protein 1) (Peritrophin A)
ruditapes2_c4089	chitin metabolic process	other metabolic processes	P	Peritrophin-1 (AgAper-1) (Peritrophic matrix protein 1) (Peritrophin A)
ruditapes2_c1023	chitin metabolic process	other metabolic processes	P	Peritrophin-1 (AgAper-1) (Peritrophic matrix protein 1) (Peritrophin A)
ruditapes2_c3877	chitin metabolic process	other metabolic processes	P	Peritrophin-1 (AgAper-1) (Peritrophic matrix protein 1) (Peritrophin A)
ruditapes_c31453	metabolic process	other metabolic processes	P	Alpha-amylase-related protein (EC 3.2.1.1)
ruditapes_c31453	carbohydrate metabolic process	other metabolic processes	P	Alpha-amylase-related protein (EC 3.2.1.1)
ruditapes_c23322	RNA-dependent DNA replication	DNA metabolism	P	Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase catalytic subunit) (Telomerase subunit P133)
ruditapes_c36001	phosphorylation	other metabolic processes	P	Casein kinase II subunit alpha (CK II subunit alpha) (EC 2.7.11.1)
ruditapes_c36001	protein amino acid phosphorylation	protein metabolism	P	Casein kinase II subunit alpha (CK II subunit alpha) (EC 2.7.11.1)
ruditapes_c36001	Wnt receptor signaling pathway	signal transduction	P	Casein kinase II subunit alpha (CK II subunit alpha) (EC 2.7.11.1)
ruditapes_c706	RNA interference	other metabolic processes	P	Regulator of nonsense transcripts 1 (EC 3.6.4.-) (ATP-dependent helicase smg-2) (Nonsense mRNA reducing factor 1) (Up-frameshift suppressor 1 homolog)
ruditapes_c706	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Regulator of nonsense transcripts 1 (EC 3.6.4.-) (ATP-dependent helicase smg-2) (Nonsense mRNA reducing factor 1) (Up-frameshift suppressor 1 homolog)
ruditapes_c706	hermaphrodite genitalia development	developmental processes	P	Regulator of nonsense transcripts 1 (EC 3.6.4.-) (ATP-dependent helicase smg-2) (Nonsense mRNA reducing factor 1) (Up-frameshift suppressor 1 homolog)
ruditapes_c706	embryonic genitalia morphogenesis	developmental processes	P	Regulator of nonsense transcripts 1 (EC 3.6.4.-) (ATP-dependent helicase smg-2) (Nonsense mRNA reducing factor 1) (Up-frameshift suppressor 1 homolog)
ruditapes_c14389	neuromuscular synaptic transmission	cell-cell signaling	P	Sodium-dependent acetylcholine transporter (Sodium:neurotransmitter symporter family protein 6)
ruditapes_c14389	neurotransmitter uptake	transport	P	Sodium-dependent acetylcholine transporter (Sodium:neurotransmitter symporter family protein 6)
ruditapes_c14389	neurotransmitter uptake	cell-cell signaling	P	Sodium-dependent acetylcholine transporter (Sodium:neurotransmitter symporter family protein 6)
ruditapes_c14389	locomotion	other biological processes	P	Sodium-dependent acetylcholine transporter (Sodium:neurotransmitter symporter family protein 6)
ruditapes_c14389	acetylcholine transport	transport	P	Sodium-dependent acetylcholine transporter (Sodium:neurotransmitter symporter family protein 6)
ruditapes_c14389	transport	transport	P	Sodium-dependent acetylcholine transporter (Sodium:neurotransmitter symporter family protein 6)
ruditapes_c14389	positive regulation of locomotion	other biological processes	P	Sodium-dependent acetylcholine transporter (Sodium:neurotransmitter symporter family protein 6)
ruditapes_c14389	neurotransmitter transport	transport	P	Sodium-dependent acetylcholine transporter (Sodium:neurotransmitter symporter family protein 6)
ruditapes_c14389	choline transport	transport	P	Sodium-dependent acetylcholine transporter (Sodium:neurotransmitter symporter family protein 6)
ruditapes_lrc36251	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc35817	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_s37989	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_c13542	defense response	stress response	P	Beta-insect excitatory toxin BmK IT-AP (Bm33-I) (BmKITAP) (Insect toxin analgesic peptide)
ruditapes_c1058	translation	protein metabolism	P	Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (eIF-4F 25 kDa subunit) (mRNA cap-binding protein)
ruditapes_c26737	regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (eIF-4F 25 kDa subunit) (mRNA cap-binding protein)
ruditapes_c1058	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (eIF-4F 25 kDa subunit) (mRNA cap-binding protein)
ruditapes_c1058	regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (eIF-4F 25 kDa subunit) (mRNA cap-binding protein)
ruditapes_c26737	translation	protein metabolism	P	Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (eIF-4F 25 kDa subunit) (mRNA cap-binding protein)
ruditapes_c26737	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (eIF-4F 25 kDa subunit) (mRNA cap-binding protein)
ruditapes_c6495	cell redox homeostasis	other biological processes	P	Tryparedoxin (TryX)
ruditapes_c6495	electron transport chain	other metabolic processes	P	Tryparedoxin (TryX)
ruditapes_c6495	transport	transport	P	Tryparedoxin (TryX)
ruditapes_c16210	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta)
ruditapes_c16210	chaperone mediated protein folding independent of cofactor	protein metabolism	P	T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta)
ruditapes_c16210	protein folding	protein metabolism	P	T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta)
ruditapes_c15865	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor AP-1 (Activator protein 1) (AP1) (Proto-oncogene c-Jun) (V-jun avian sarcoma virus 17 oncogene homolog)
ruditapes_c15865	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor AP-1 (Activator protein 1) (AP1) (Proto-oncogene c-Jun) (V-jun avian sarcoma virus 17 oncogene homolog)
ruditapes_c29472	positive regulation of neuron differentiation	developmental processes	P	Alpha-2B adrenergic receptor (Alpha-2B adrenoreceptor) (Alpha-2B adrenoceptor) (Alpha-2BAR) (Fragment)
ruditapes_c29472	signal transduction	signal transduction	P	Alpha-2B adrenergic receptor (Alpha-2B adrenoreceptor) (Alpha-2B adrenoceptor) (Alpha-2BAR) (Fragment)
ruditapes_c29472	angiogenesis	developmental processes	P	Alpha-2B adrenergic receptor (Alpha-2B adrenoreceptor) (Alpha-2B adrenoceptor) (Alpha-2BAR) (Fragment)
ruditapes_c29472	activation of protein kinase B activity	other metabolic processes	P	Alpha-2B adrenergic receptor (Alpha-2B adrenoreceptor) (Alpha-2B adrenoceptor) (Alpha-2BAR) (Fragment)
ruditapes_c29472	MAPKKK cascade	signal transduction	P	Alpha-2B adrenergic receptor (Alpha-2B adrenoreceptor) (Alpha-2B adrenoceptor) (Alpha-2BAR) (Fragment)
ruditapes_c29472	G-protein coupled receptor protein signaling pathway	signal transduction	P	Alpha-2B adrenergic receptor (Alpha-2B adrenoreceptor) (Alpha-2B adrenoceptor) (Alpha-2BAR) (Fragment)
ruditapes_c15763	transport	transport	P	Aquaporin-2 (AQP-2) (ADH water channel) (Aquaporin-CD) (AQP-CD) (Collecting duct water channel protein) (WCH-CD) (Water channel protein for renal collecting duct) (Fragment)
ruditapes_lrc38361	hemoglobin biosynthetic process	protein metabolism	P	Inhibin alpha chain
ruditapes_lrc38361	induction of apoptosis	death	P	Inhibin alpha chain
ruditapes_c8832	negative regulation of positive chemotaxis	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c8832	negative regulation of angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c8832	angiogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c8832	cell differentiation	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c8832	signal transduction	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_c8832	negative regulation of cell-substrate adhesion	cell adhesion	P	Angiopoietin-2 (ANG-2)
ruditapes_c8832	multicellular organismal development	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c8832	negative regulation of blood vessel endothelial cell migration	other biological processes	P	Angiopoietin-2 (ANG-2)
ruditapes_c8832	Tie receptor signaling pathway	signal transduction	P	Angiopoietin-2 (ANG-2)
ruditapes_c8832	blood vessel morphogenesis	developmental processes	P	Angiopoietin-2 (ANG-2)
ruditapes2_c445	metabolic process	other metabolic processes	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes2_c161	oxidation reduction	other metabolic processes	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes2_c445	phospholipid catabolic process	other metabolic processes	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes2_c445	oxidation reduction	other metabolic processes	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes2_c161	response to reactive oxygen species	stress response	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes2_c161	lipid catabolic process	other metabolic processes	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes2_c445	response to reactive oxygen species	stress response	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes2_c161	response to oxidative stress	stress response	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes2_c445	lipid catabolic process	other metabolic processes	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes2_c161	phospholipid catabolic process	other metabolic processes	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes2_c161	metabolic process	other metabolic processes	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes2_c445	response to oxidative stress	stress response	P	Peroxiredoxin-6 (EC 1.11.1.15) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.-) (Antioxidant protein 2) (Ciliary body glutathione peroxidase) (Non-selenium glutathione peroxidase) (NSGPx) (EC 1.11.1.9) (PHGPx)
ruditapes_c26725	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta') (RNA polymerase subunit beta')
ruditapes_c11685	ion transport	transport	P	"ATP synthase epsilon chain, chloroplastic (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)"
ruditapes_c11685	transport	transport	P	"ATP synthase epsilon chain, chloroplastic (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)"
ruditapes_c11685	ATP synthesis coupled proton transport	transport	P	"ATP synthase epsilon chain, chloroplastic (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)"
ruditapes_c11685	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase epsilon chain, chloroplastic (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)"
ruditapes_c11685	ATP biosynthetic process	other metabolic processes	P	"ATP synthase epsilon chain, chloroplastic (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)"
ruditapes_c11685	proton transport	transport	P	"ATP synthase epsilon chain, chloroplastic (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)"
ruditapes_c2354	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c2354	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c2354	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c28218	proton transport	transport	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c28218	ion transport	transport	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c28218	transport	transport	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c28218	ATP biosynthetic process	other metabolic processes	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c22701	response to cold	stress response	P	Galactinol synthase 3 (AtGolS3) (GolS-3) (EC 2.4.1.123)
ruditapes_c22701	response to oxidative stress	stress response	P	Galactinol synthase 3 (AtGolS3) (GolS-3) (EC 2.4.1.123)
ruditapes_c2634	carbohydrate transport	transport	P	Sucrose transport protein SUC3 (Sucrose permease 3) (Sucrose transporter 2) (Sucrose-proton symporter 3)
ruditapes_c2634	response to wounding	stress response	P	Sucrose transport protein SUC3 (Sucrose permease 3) (Sucrose transporter 2) (Sucrose-proton symporter 3)
ruditapes_c2634	transmembrane transport	transport	P	Sucrose transport protein SUC3 (Sucrose permease 3) (Sucrose transporter 2) (Sucrose-proton symporter 3)
ruditapes_c2634	transport	transport	P	Sucrose transport protein SUC3 (Sucrose permease 3) (Sucrose transporter 2) (Sucrose-proton symporter 3)
ruditapes_c2634	sucrose transport	transport	P	Sucrose transport protein SUC3 (Sucrose permease 3) (Sucrose transporter 2) (Sucrose-proton symporter 3)
ruditapes2_c747	regulation of pollen tube growth	developmental processes	P	Probable nucleoredoxin 1 (AtNrx1) (EC 1.8.1.8)
ruditapes2_c747	response to cadmium ion	other biological processes	P	Probable nucleoredoxin 1 (AtNrx1) (EC 1.8.1.8)
ruditapes2_c747	pollen tube growth	developmental processes	P	Probable nucleoredoxin 1 (AtNrx1) (EC 1.8.1.8)
ruditapes2_c747	pollen tube guidance	developmental processes	P	Probable nucleoredoxin 1 (AtNrx1) (EC 1.8.1.8)
ruditapes2_c747	cell redox homeostasis	other biological processes	P	Probable nucleoredoxin 1 (AtNrx1) (EC 1.8.1.8)
ruditapes2_c747	oxidation reduction	other metabolic processes	P	Probable nucleoredoxin 1 (AtNrx1) (EC 1.8.1.8)
ruditapes2_c899	biological_process	other biological processes	P	"UPF0187 protein At2g45870, chloroplastic"
ruditapes_c13602	regulation of actin filament polymerization	protein metabolism	P	Actin-related protein 2/3 complex subunit 1A (Actin-related protein C1) (Actin-related protein C1A) (Arp2/3 complex 41 kDa subunit) (p41-ARC)
ruditapes_c13602	regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 1A (Actin-related protein C1) (Actin-related protein C1A) (Arp2/3 complex 41 kDa subunit) (p41-ARC)
ruditapes_c13602	actin filament organization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 1A (Actin-related protein C1) (Actin-related protein C1A) (Arp2/3 complex 41 kDa subunit) (p41-ARC)
ruditapes_s35824	oxidation reduction	other metabolic processes	P	"Alternative NAD(P)H dehydrogenase 2, mitochondrial (EC 1.6.-.-)"
ruditapes2_c2685	oxidation reduction	other metabolic processes	P	"Alternative NAD(P)H dehydrogenase 2, mitochondrial (EC 1.6.-.-)"
ruditapes_c9348	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 32 (ABC transporter ABCG.32) (AtABCG32) (Probable pleiotropic drug resistance protein 4)
ruditapes_c9348	transport	transport	P	ABC transporter G family member 32 (ABC transporter ABCG.32) (AtABCG32) (Probable pleiotropic drug resistance protein 4)
ruditapes_c9348	cuticle development	developmental processes	P	ABC transporter G family member 32 (ABC transporter ABCG.32) (AtABCG32) (Probable pleiotropic drug resistance protein 4)
ruditapes_c9601	transport	transport	P	Transmembrane emp24 domain-containing protein p24delta8 (p24 family protein delta2b) (p24delta2b) (p24 family protein delta8) (p24delta8)
ruditapes_c22362	ionotropic glutamate receptor signaling pathway	signal transduction	P	Glutamate receptor 2.9 (Ligand-gated ion channel 2.9)
ruditapes_c22362	calcium ion transport	transport	P	Glutamate receptor 2.9 (Ligand-gated ion channel 2.9)
ruditapes_c22362	transport	transport	P	Glutamate receptor 2.9 (Ligand-gated ion channel 2.9)
ruditapes_c22362	calcium-mediated signaling	signal transduction	P	Glutamate receptor 2.9 (Ligand-gated ion channel 2.9)
ruditapes_c22362	ion transport	transport	P	Glutamate receptor 2.9 (Ligand-gated ion channel 2.9)
ruditapes_c22362	transmembrane calcium ion transport	transport	P	Glutamate receptor 2.9 (Ligand-gated ion channel 2.9)
ruditapes_c29153	metabolic process	other metabolic processes	P	"(+)-bornyl diphosphate synthase, chloroplastic (BPPS) (EC 5.5.1.8) ((+)-alpha-pinene synthase) (EC 4.2.3.121) ((+)-camphene synthase) (EC 4.2.3.116) (SBS)"
ruditapes_c21846	oxidation reduction	other metabolic processes	P	Respiratory burst oxidase homolog protein E (EC 1.11.1.-) (EC 1.6.3.-) (NADPH oxidase RBOHE) (AtRBOHE)
ruditapes_c21345	oxidation reduction	other metabolic processes	P	Respiratory burst oxidase homolog protein E (EC 1.11.1.-) (EC 1.6.3.-) (NADPH oxidase RBOHE) (AtRBOHE)
ruditapes2_c3245	defense response to bacterium	stress response	P	Antimicrobial peptide 1
ruditapes2_c3245	defense response to fungus	stress response	P	Antimicrobial peptide 1
ruditapes_c3722	defense response	stress response	P	Antimicrobial peptide 1
ruditapes2_c3245	killing of cells of another organism	other biological processes	P	Antimicrobial peptide 1
ruditapes_c3722	defense response to fungus	stress response	P	Antimicrobial peptide 1
ruditapes_c3722	killing of cells of another organism	other biological processes	P	Antimicrobial peptide 1
ruditapes2_c3245	defense response	stress response	P	Antimicrobial peptide 1
ruditapes_c3722	defense response to bacterium	stress response	P	Antimicrobial peptide 1
ruditapes_c14803	metabolic process	other metabolic processes	P	IAA-amino acid hydrolase ILR1-like 3 (EC 3.5.1.-)
ruditapes2_c1498	cell wall organization	cell organization and biogenesis	P	Pollen-specific leucine-rich repeat extensin-like protein 4 (AtPEX4) (Pollen-specific LRR/EXTENSIN4) (Cell wall hydroxyproline-rich glycoprotein)
ruditapes_c20997	L-ascorbic acid biosynthetic process	other metabolic processes	P	L-galactose dehydrogenase (At-GalDH) (L-GalDH) (EC 1.1.1.316)
ruditapes_lrc32481	protein folding	protein metabolism	P	Calreticulin
ruditapes_c13221	transport	transport	P	AP-4 complex subunit sigma (AP-4 adapter complex subunit sigma) (Adapter-related protein complex 4 subunit sigma) (Sigma subunit of AP-4) (Sigma4-adaptin)
ruditapes_c13221	protein transport	transport	P	AP-4 complex subunit sigma (AP-4 adapter complex subunit sigma) (Adapter-related protein complex 4 subunit sigma) (Sigma subunit of AP-4) (Sigma4-adaptin)
ruditapes_c5276	putrescine biosynthetic process	other metabolic processes	P	Arginine decarboxylase (ADC) (ARGDC) (EC 4.1.1.19)
ruditapes_c5276	spermidine biosynthetic process	other metabolic processes	P	Arginine decarboxylase (ADC) (ARGDC) (EC 4.1.1.19)
ruditapes_c5276	arginine catabolic process	other metabolic processes	P	Arginine decarboxylase (ADC) (ARGDC) (EC 4.1.1.19)
ruditapes_c19707	oligopeptide transport	transport	P	Oligopeptide transporter 7 (AtOPT7)
ruditapes_c19707	protein transport	transport	P	Oligopeptide transporter 7 (AtOPT7)
ruditapes_c19707	transport	transport	P	Oligopeptide transporter 7 (AtOPT7)
ruditapes_c19707	transmembrane transport	transport	P	Oligopeptide transporter 7 (AtOPT7)
ruditapes_c19707	peptide transport	transport	P	Oligopeptide transporter 7 (AtOPT7)
ruditapes_c31766	long-distance posttranscriptional gene silencing	other metabolic processes	P	RNA-dependent RNA polymerase 2 (AtRDRP2) (EC 2.7.7.48) (Protein SILENCING MOVEMENT DEFICIENT 1) (RNA-directed RNA polymerase 2)
ruditapes_c31766	RNA interference	other metabolic processes	P	RNA-dependent RNA polymerase 2 (AtRDRP2) (EC 2.7.7.48) (Protein SILENCING MOVEMENT DEFICIENT 1) (RNA-directed RNA polymerase 2)
ruditapes_c31766	response to salicylic acid stimulus	other biological processes	P	RNA-dependent RNA polymerase 2 (AtRDRP2) (EC 2.7.7.48) (Protein SILENCING MOVEMENT DEFICIENT 1) (RNA-directed RNA polymerase 2)
ruditapes_c31766	gene silencing	other metabolic processes	P	RNA-dependent RNA polymerase 2 (AtRDRP2) (EC 2.7.7.48) (Protein SILENCING MOVEMENT DEFICIENT 1) (RNA-directed RNA polymerase 2)
ruditapes_c31766	gene silencing by RNA	other metabolic processes	P	RNA-dependent RNA polymerase 2 (AtRDRP2) (EC 2.7.7.48) (Protein SILENCING MOVEMENT DEFICIENT 1) (RNA-directed RNA polymerase 2)
ruditapes_c31766	cell-cell signaling	cell-cell signaling	P	RNA-dependent RNA polymerase 2 (AtRDRP2) (EC 2.7.7.48) (Protein SILENCING MOVEMENT DEFICIENT 1) (RNA-directed RNA polymerase 2)
ruditapes_c31766	"RNA interference, production of siRNA"	RNA metabolism	P	RNA-dependent RNA polymerase 2 (AtRDRP2) (EC 2.7.7.48) (Protein SILENCING MOVEMENT DEFICIENT 1) (RNA-directed RNA polymerase 2)
ruditapes_c25178	oxidation reduction	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
ruditapes_c25178	glycerol metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
ruditapes_c25178	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
ruditapes_c8829	metabolic process	other metabolic processes	P	Phosphate acetyltransferase (EC 2.3.1.8) (Phosphotransacetylase)
ruditapes_c22872	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes_lrc31183	protein import	transport	P	Protein translocase subunit SecA
ruditapes_lrc31183	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes_c22872	protein transport	transport	P	Protein translocase subunit SecA
ruditapes_lrc31183	protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c22872	transport	transport	P	Protein translocase subunit SecA
ruditapes_c22872	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes_c22872	protein import	transport	P	Protein translocase subunit SecA
ruditapes_lrc31183	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes_lrc31183	transport	transport	P	Protein translocase subunit SecA
ruditapes2_c1806	cell cycle	cell cycle and proliferation	P	Rod shape-determining protein RodA
ruditapes2_c1806	regulation of cell shape	cell organization and biogenesis	P	Rod shape-determining protein RodA
ruditapes_lrc22505	NAD biosynthetic process	other metabolic processes	P	Probable glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing])
ruditapes_lrc22505	nitrogen compound metabolic process	other metabolic processes	P	Probable glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing])
ruditapes_c24480	DNA repair	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c24480	DNA repair	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c24480	response to DNA damage stimulus	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c24480	DNA recombination	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c24480	SOS response	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes2_c1526	D-gluconate metabolic process	other metabolic processes	P	"6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)"
ruditapes2_c1526	oxidation reduction	other metabolic processes	P	"6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)"
ruditapes2_c1526	pentose-phosphate shunt	other metabolic processes	P	"6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)"
ruditapes_lrc39251	D-gluconate metabolic process	other metabolic processes	P	"6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)"
ruditapes_lrc39251	pentose-phosphate shunt	other metabolic processes	P	"6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)"
ruditapes_lrc39251	oxidation reduction	other metabolic processes	P	"6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)"
ruditapes_c16101	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes_c20562	metabolic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c20562	lysine biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c20562	cellular amino acid biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c20562	diaminopimelate biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c20562	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c9754	lipid biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c9754	lipid A biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c25289	terpenoid biosynthetic process	other metabolic processes	P	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) (MECPP-synthase) (MECPS) (EC 4.6.1.12)"
ruditapes_c25289	isoprenoid biosynthetic process	other metabolic processes	P	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) (MECPP-synthase) (MECPS) (EC 4.6.1.12)"
ruditapes_c9981	heme biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c9981	porphyrin biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c17535	cell division	other biological processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c17535	peptidoglycan biosynthetic process	other metabolic processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c17535	regulation of cell shape	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c17535	cell cycle	cell cycle and proliferation	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c17535	cell wall organization	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_lrc38633	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional enzyme MurC/Ddl [Includes: UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase); D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)]
ruditapes_lrc38633	regulation of cell shape	cell organization and biogenesis	P	Bifunctional enzyme MurC/Ddl [Includes: UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase); D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)]
ruditapes_lrc38633	biosynthetic process	other metabolic processes	P	Bifunctional enzyme MurC/Ddl [Includes: UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase); D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)]
ruditapes_lrc38633	metabolic process	other metabolic processes	P	Bifunctional enzyme MurC/Ddl [Includes: UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase); D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)]
ruditapes_lrc38633	cell wall organization	cell organization and biogenesis	P	Bifunctional enzyme MurC/Ddl [Includes: UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase); D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)]
ruditapes_lrc38633	cell division	other biological processes	P	Bifunctional enzyme MurC/Ddl [Includes: UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase); D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)]
ruditapes_lrc38633	cell cycle	cell cycle and proliferation	P	Bifunctional enzyme MurC/Ddl [Includes: UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase); D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)]
ruditapes_c18990	glycogen biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_c18990	biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_c18990	glucan biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes2_lrc5424	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_s36286	metabolic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_lrc34092	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_lrc36661	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_lrc37282	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_lrc37282	metabolic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_s36286	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_lrc36661	metabolic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes2_lrc5424	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes2_lrc5424	metabolic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_lrc34092	metabolic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_s36286	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_lrc36661	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_lrc34092	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_lrc37282	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase subunit alpha (EC 1.17.4.1) (Ribonucleotide reductase)
ruditapes_c27524	glycogen biosynthetic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c27524	carbohydrate metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c27524	glycogen metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c7898	fatty acid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes_c7898	metabolic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes_c7898	lipid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes_c15408	pathogenesis	other biological processes	P	Endoribonuclease VapD 2 (EC 3.1.-.-) (Virulence-associated protein 2)
ruditapes_c10078	oxidation reduction	other metabolic processes	P	D-beta-hydroxybutyrate dehydrogenase (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase) (3-HBDH)
ruditapes_c10078	metabolic process	other metabolic processes	P	D-beta-hydroxybutyrate dehydrogenase (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase) (3-HBDH)
ruditapes_c5635	oxidation reduction	other metabolic processes	P	Sarcosine reductase complex component B subunit alpha (EC 1.21.4.3) (Selenoprotein PB alpha) [Cleaved into: Sarcosine reductase complex component B beta chain; Sarcosine reductase complex component B alpha chain]
ruditapes_c3438	negative regulation of DNA replication initiation	DNA metabolism	P	Uncharacterized protein HI
ruditapes2_c1065	transport	transport	P	Uncharacterized TonB-dependent receptor HI
ruditapes_lrc15529	biosynthetic process	other metabolic processes	P	Aspartate aminotransferase (AspAT) (EC 2.6.1.1) (Transaminase A)
ruditapes_lrc15529	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	Aspartate aminotransferase (AspAT) (EC 2.6.1.1) (Transaminase A)
ruditapes_c14691	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative anti-sigma factor antagonist TM1081 homolog (ORF3)
ruditapes_c24711	oxidation reduction	other metabolic processes	P	USG-1 protein homolog
ruditapes_c24711	threonine biosynthetic process	other metabolic processes	P	USG-1 protein homolog
ruditapes_c24711	isoleucine biosynthetic process	other metabolic processes	P	USG-1 protein homolog
ruditapes_c24711	cellular amino acid biosynthetic process	other metabolic processes	P	USG-1 protein homolog
ruditapes_c24711	cellular amino acid metabolic process	other metabolic processes	P	USG-1 protein homolog
ruditapes_c24711	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	USG-1 protein homolog
ruditapes_c24711	methionine biosynthetic process	other metabolic processes	P	USG-1 protein homolog
ruditapes_c30893	oxidation reduction	other metabolic processes	P	Benzylsuccinate synthase activating enzyme (EC 1.97.1.-)
ruditapes_c30893	glucose metabolic process	other metabolic processes	P	Benzylsuccinate synthase activating enzyme (EC 1.97.1.-)
ruditapes_c106	chondroitin sulfate biosynthetic process	other metabolic processes	P	Carbohydrate sulfotransferase 3 (EC 2.8.2.17) (Chondroitin 6-O-sulfotransferase 1) (C6ST-1) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 0) (GST-0)
ruditapes_c106	carbohydrate metabolic process	other metabolic processes	P	Carbohydrate sulfotransferase 3 (EC 2.8.2.17) (Chondroitin 6-O-sulfotransferase 1) (C6ST-1) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 0) (GST-0)
ruditapes_c106	T cell homeostasis	other biological processes	P	Carbohydrate sulfotransferase 3 (EC 2.8.2.17) (Chondroitin 6-O-sulfotransferase 1) (C6ST-1) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 0) (GST-0)
ruditapes_c627	epithelial cell migration	other biological processes	P	Protocadherin Fat 2 (Multiple epidermal growth factor-like domains protein 1) (Multiple EGF-like domains protein 1)
ruditapes_c13771	epithelial cell migration	other biological processes	P	Protocadherin Fat 2 (Multiple epidermal growth factor-like domains protein 1) (Multiple EGF-like domains protein 1)
ruditapes_c13771	cell adhesion	cell adhesion	P	Protocadherin Fat 2 (Multiple epidermal growth factor-like domains protein 1) (Multiple EGF-like domains protein 1)
ruditapes_c11095	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 2 (Multiple epidermal growth factor-like domains protein 1) (Multiple EGF-like domains protein 1)
ruditapes_c13771	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 2 (Multiple epidermal growth factor-like domains protein 1) (Multiple EGF-like domains protein 1)
ruditapes_c627	cell adhesion	cell adhesion	P	Protocadherin Fat 2 (Multiple epidermal growth factor-like domains protein 1) (Multiple EGF-like domains protein 1)
ruditapes_c627	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 2 (Multiple epidermal growth factor-like domains protein 1) (Multiple EGF-like domains protein 1)
ruditapes_c11095	epithelial cell migration	other biological processes	P	Protocadherin Fat 2 (Multiple epidermal growth factor-like domains protein 1) (Multiple EGF-like domains protein 1)
ruditapes_c11095	cell adhesion	cell adhesion	P	Protocadherin Fat 2 (Multiple epidermal growth factor-like domains protein 1) (Multiple EGF-like domains protein 1)
ruditapes_c28532	cholesterol metabolic process	other metabolic processes	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes2_c2644	lipid metabolic process	other metabolic processes	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes_c28532	lipid metabolic process	other metabolic processes	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes2_c2644	lipid transport	transport	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes2_c2644	transport	transport	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes_c28532	lipid transport	transport	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes2_c2644	endocytosis	transport	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes2_c2644	endocytosis	cell organization and biogenesis	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes_c28532	multicellular organismal development	developmental processes	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes2_c2644	cholesterol metabolic process	other metabolic processes	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes_c28532	steroid metabolic process	other metabolic processes	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes_c28532	transport	transport	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes2_c2644	steroid metabolic process	other metabolic processes	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes_c28532	endocytosis	transport	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes_c28532	endocytosis	cell organization and biogenesis	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes2_c2644	multicellular organismal development	developmental processes	P	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)
ruditapes_c2666	regulation of pH	other biological processes	P	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)
ruditapes_c2666	transport	transport	P	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)
ruditapes_c2666	anion transport	transport	P	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)
ruditapes_c2666	sodium ion transport	transport	P	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)
ruditapes_c2666	bicarbonate transport	transport	P	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)
ruditapes_c2666	ion transport	transport	P	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)
ruditapes_c18638	transmembrane transport	transport	P	Sodium channel protein type 11 subunit alpha (NaN) (Sensory neuron sodium channel 2) (Sodium channel protein type XI subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.9)
ruditapes_c18638	ion transport	transport	P	Sodium channel protein type 11 subunit alpha (NaN) (Sensory neuron sodium channel 2) (Sodium channel protein type XI subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.9)
ruditapes_c18638	regulation of transmembrane ion transport	transport	P	Sodium channel protein type 11 subunit alpha (NaN) (Sensory neuron sodium channel 2) (Sodium channel protein type XI subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.9)
ruditapes_c18638	sodium ion transport	transport	P	Sodium channel protein type 11 subunit alpha (NaN) (Sensory neuron sodium channel 2) (Sodium channel protein type XI subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.9)
ruditapes_c18638	transport	transport	P	Sodium channel protein type 11 subunit alpha (NaN) (Sensory neuron sodium channel 2) (Sodium channel protein type XI subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.9)
ruditapes_c23720	chromatin modification	cell organization and biogenesis	P	Calcineurin-binding protein cabin-1 (Calcineurin inhibitor) (CAIN)
ruditapes_c23720	negative regulation of cell death	death	P	Calcineurin-binding protein cabin-1 (Calcineurin inhibitor) (CAIN)
ruditapes_c14734	transport	transport	P	"Cytoplasmic dynein 1 intermediate chain 2 (Cytoplasmic dynein intermediate chain 2) (Dynein intermediate chain 2, cytosolic) (DH IC-2)"
ruditapes_c13561	regulation of fat cell differentiation	other biological processes	P	Phosphatidylinositol phosphatase PTPRQ (EC 3.1.3.-) (Protein-tyrosine phosphatase receptor-type expressed by glomerular mesangial cells protein 1) (rPTP-GMC1) (Receptor-type tyrosine-protein phosphatase Q) (PTP-RQ) (R-PTP-Q) (EC 3.1.3.48)
ruditapes_c13561	protein amino acid dephosphorylation	protein metabolism	P	Phosphatidylinositol phosphatase PTPRQ (EC 3.1.3.-) (Protein-tyrosine phosphatase receptor-type expressed by glomerular mesangial cells protein 1) (rPTP-GMC1) (Receptor-type tyrosine-protein phosphatase Q) (PTP-RQ) (R-PTP-Q) (EC 3.1.3.48)
ruditapes_c13561	dephosphorylation	other metabolic processes	P	Phosphatidylinositol phosphatase PTPRQ (EC 3.1.3.-) (Protein-tyrosine phosphatase receptor-type expressed by glomerular mesangial cells protein 1) (rPTP-GMC1) (Receptor-type tyrosine-protein phosphatase Q) (PTP-RQ) (R-PTP-Q) (EC 3.1.3.48)
ruditapes_lrc20915	response to vitamin K	other biological processes	P	Vitamin K-dependent gamma-carboxylase (EC 4.1.1.90) (Gamma-glutamyl carboxylase) (Peptidyl-glutamate 4-carboxylase) (Vitamin K gamma glutamyl carboxylase)
ruditapes_lrc20915	embryonic development	developmental processes	P	Vitamin K-dependent gamma-carboxylase (EC 4.1.1.90) (Gamma-glutamyl carboxylase) (Peptidyl-glutamate 4-carboxylase) (Vitamin K gamma glutamyl carboxylase)
ruditapes_lrc20915	peptidyl-glutamic acid carboxylation	protein metabolism	P	Vitamin K-dependent gamma-carboxylase (EC 4.1.1.90) (Gamma-glutamyl carboxylase) (Peptidyl-glutamate 4-carboxylase) (Vitamin K gamma glutamyl carboxylase)
ruditapes_c19849	cullin deneddylation	protein metabolism	P	COP9 signalosome complex subunit 4 (SGN4) (Signalosome subunit 4) (JAB1-containing signalosome subunit 4)
ruditapes_c13662	response to organic cyclic substance	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c13662	response to organic nitrogen	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c13662	drug transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c26832	response to organic substance	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c26832	ATP catabolic process	other metabolic processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c26832	transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c13662	canalicular bile acid transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c13662	response to lipopolysaccharide	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c13662	response to estradiol stimulus	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c26832	response to organic nitrogen	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c26832	drug transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c12756	response to lipopolysaccharide	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c12756	response to organic cyclic substance	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c12756	transmembrane transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c12756	drug transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c12756	response to estradiol stimulus	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c26832	response to organic cyclic substance	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c12756	canalicular bile acid transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c13662	response to organic substance	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c26832	multidrug transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c26832	transmembrane transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c13662	transmembrane transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c26832	response to estradiol stimulus	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c12756	response to organic substance	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c26832	response to lipopolysaccharide	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c13662	ATP catabolic process	other metabolic processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c13662	transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c12756	multidrug transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c12756	response to organic nitrogen	other biological processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c13662	multidrug transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c26832	canalicular bile acid transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c12756	ATP catabolic process	other metabolic processes	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c12756	transport	transport	P	Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)
ruditapes_c17365	purine nucleoside transport	transport	P	Sodium/nucleoside cotransporter 2 (Concentrative nucleoside transporter 2) (CNT 2) (Na(+)/nucleoside cotransporter 2) (Sodium-coupled nucleoside transporter 2) (Sodium/purine nucleoside cotransporter) (SPNT) (Solute carrier family 28 member 2)
ruditapes_c17365	transport	transport	P	Sodium/nucleoside cotransporter 2 (Concentrative nucleoside transporter 2) (CNT 2) (Na(+)/nucleoside cotransporter 2) (Sodium-coupled nucleoside transporter 2) (Sodium/purine nucleoside cotransporter) (SPNT) (Solute carrier family 28 member 2)
ruditapes_c29078	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c29078	protein ubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c29078	regulation of cell proliferation	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c29078	labyrinthine layer development	developmental processes	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c29078	spongiotrophoblast layer development	developmental processes	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c29078	positive regulation of cell proliferation	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c17455	positive regulation of apoptosis	death	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	forebrain development	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	protein processing	protein metabolism	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	memory	other biological processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	beta-amyloid metabolic process	other metabolic processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	positive regulation of receptor recycling	signal transduction	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	positive regulation of receptor recycling	protein metabolism	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	response to hypoxia	stress response	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	membrane protein ectodomain proteolysis	protein metabolism	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	anagen	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	cell fate specification	other biological processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	somitogenesis	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	Notch signaling pathway	signal transduction	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	embryonic development	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	regulation of synaptic plasticity	cell-cell signaling	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	embryonic limb morphogenesis	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	apoptosis	death	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	negative regulation of apoptosis	death	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	cardiac muscle contraction	other biological processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	brain morphogenesis	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	hemopoietic progenitor cell differentiation	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	skin morphogenesis	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	positive regulation of catalytic activity	other biological processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	thymus development	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	negative regulation of epidermal growth factor receptor activity	signal transduction	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	negative regulation of epidermal growth factor receptor activity	other metabolic processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	regulation of epidermal growth factor receptor activity	other metabolic processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	hair follicle development	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	myeloid leukocyte differentiation	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	T cell receptor signaling pathway	signal transduction	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	positive regulation of coagulation	other biological processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	calcium ion transport	transport	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	T cell activation during immune response	other biological processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	regulation of epidermal growth factor receptor activity	signal transduction	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	learning or memory	other biological processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	negative regulation of ubiquitin-protein ligase activity	other biological processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	proteolysis	protein metabolism	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	cellular protein metabolic process	protein metabolism	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	locomotion	other biological processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	alveolus development	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	negative regulation of protein amino acid phosphorylation	protein metabolism	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	protein maturation	protein metabolism	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	protein transport	transport	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c17455	dorsal/ventral neural tube patterning	developmental processes	P	Presenilin-2 (PS-2) (EC 3.4.23.-) [Cleaved into: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit]
ruditapes_c15327	cytoskeleton organization	cell organization and biogenesis	P	Protein bassoon
ruditapes_s37979	regulation of Rho protein signal transduction	signal transduction	P	"FYVE, RhoGEF and PH domain-containing protein 3"
ruditapes_s37979	filopodium assembly	cell organization and biogenesis	P	"FYVE, RhoGEF and PH domain-containing protein 3"
ruditapes_c20662	signal transduction	signal transduction	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c1115	regulation of apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c1115	apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c20662	apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c1115	induction of apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c20662	regulation of apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c1115	signal transduction	signal transduction	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c20662	induction of apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c29597	embryonic camera-type eye morphogenesis	developmental processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	positive regulation of DNA binding	other biological processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	anterior/posterior pattern formation	developmental processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	lens induction in camera-type eye	developmental processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	neuron differentiation	developmental processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	positive regulation of cell proliferation	cell cycle and proliferation	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	embryonic retina morphogenesis in camera-type eye	developmental processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	retina layer formation	developmental processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	protein amino acid phosphorylation	protein metabolism	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	"transcription, DNA-dependent"	RNA metabolism	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	apoptosis	death	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	phosphorylation	other metabolic processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	lens induction in camera-type eye	cell-cell signaling	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	smoothened signaling pathway	signal transduction	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes_c29597	regulation of tumor necrosis factor-mediated signaling pathway	signal transduction	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2) (Protein kinase Myak)
ruditapes2_c3575	biological_process	other biological processes	P	C1q-related factor (Complement component 1 Q subcomponent-like 1)
ruditapes2_c2400	biological_process	other biological processes	P	C1q-related factor (Complement component 1 Q subcomponent-like 1)
ruditapes_c14607	biological_process	other biological processes	P	C1q-related factor (Complement component 1 Q subcomponent-like 1)
ruditapes_c15094	actin cytoskeleton organization	cell organization and biogenesis	P	Coronin-1B (Coronin-2)
ruditapes_c21439	metabolic process	other metabolic processes	P	LanC-like protein 1 (40 kDa erythrocyte membrane protein) (p40)
ruditapes_c21439	G-protein coupled receptor protein signaling pathway	signal transduction	P	LanC-like protein 1 (40 kDa erythrocyte membrane protein) (p40)
ruditapes_c8344	interspecies interaction between organisms	other biological processes	P	Nuclear export protein (NEP) (Non structural protein 2) (NS2)
ruditapes_c8344	transport	transport	P	Nuclear export protein (NEP) (Non structural protein 2) (NS2)
ruditapes_c8344	RNA export from nucleus	transport	P	Nuclear export protein (NEP) (Non structural protein 2) (NS2)
ruditapes_c29360	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
ruditapes_c24554	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
ruditapes_c29360	evasion by virus of host immune response	stress response	P	Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
ruditapes_c24554	evasion by virus of host immune response	stress response	P	Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
ruditapes_c29360	apoptosis	death	P	Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
ruditapes_c24554	apoptosis	death	P	Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
ruditapes_c8035	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c8035	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c8035	methylation	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c8035	mRNA capping	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c8035	metabolic process	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c8035	mRNA processing	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c23471	pathogenesis	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein)
ruditapes_c23471	interspecies interaction between organisms	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein)
ruditapes_c7793	apoptosis	death	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	ion transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	transformation of host cell by virus	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	metabolic process	other metabolic processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c7793	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c8603	RNA-dependent DNA replication	DNA metabolism	P	Gag-Pol polyprotein [Cleaved into: Matrix protein p10 (MA); p20; Capsid protein p25 (CA); Nucleocapsid protein p14 (NC-pol); Protease p15 (PR) (EC 3.4.23.-); Reverse transcriptase/ribonuclease H p90 (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase p46 (IN)]
ruditapes_c8603	DNA recombination	DNA metabolism	P	Gag-Pol polyprotein [Cleaved into: Matrix protein p10 (MA); p20; Capsid protein p25 (CA); Nucleocapsid protein p14 (NC-pol); Protease p15 (PR) (EC 3.4.23.-); Reverse transcriptase/ribonuclease H p90 (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase p46 (IN)]
ruditapes_c8603	proteolysis	protein metabolism	P	Gag-Pol polyprotein [Cleaved into: Matrix protein p10 (MA); p20; Capsid protein p25 (CA); Nucleocapsid protein p14 (NC-pol); Protease p15 (PR) (EC 3.4.23.-); Reverse transcriptase/ribonuclease H p90 (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase p46 (IN)]
ruditapes_c8603	metabolic process	other metabolic processes	P	Gag-Pol polyprotein [Cleaved into: Matrix protein p10 (MA); p20; Capsid protein p25 (CA); Nucleocapsid protein p14 (NC-pol); Protease p15 (PR) (EC 3.4.23.-); Reverse transcriptase/ribonuclease H p90 (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase p46 (IN)]
ruditapes_c8603	DNA integration	DNA metabolism	P	Gag-Pol polyprotein [Cleaved into: Matrix protein p10 (MA); p20; Capsid protein p25 (CA); Nucleocapsid protein p14 (NC-pol); Protease p15 (PR) (EC 3.4.23.-); Reverse transcriptase/ribonuclease H p90 (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase p46 (IN)]
ruditapes_c3836	metabolic process	other metabolic processes	P	Trypsinogen-like protein 3
ruditapes_c449	metabolic process	other metabolic processes	P	Trypsinogen-like protein 3
ruditapes_c6404	carbohydrate metabolic process	other metabolic processes	P	Carbohydrate sulfotransferase 3 (EC 2.8.2.17) (Chondroitin 6-O-sulfotransferase 1) (C6ST-1) (Nervous system involved sulfotransferase)
ruditapes_c14938	proteolysis	protein metabolism	P	Matrix metalloproteinase-21 (MMP-21) (xMMP) (EC 3.4.24.-)
ruditapes_c14938	metabolic process	other metabolic processes	P	Matrix metalloproteinase-21 (MMP-21) (xMMP) (EC 3.4.24.-)
ruditapes2_c2564	response to pain	stress response	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	multicellular organismal development	developmental processes	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	spinal cord patterning	developmental processes	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	positive regulation of protein kinase activity	other metabolic processes	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	cell adhesion	cell adhesion	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	brain development	developmental processes	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	cell morphogenesis involved in differentiation	cell organization and biogenesis	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	peptidyl-tyrosine phosphorylation	protein metabolism	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	cerebral cortex tangential migration	developmental processes	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	central nervous system development	developmental processes	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	neuron migration	developmental processes	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	axon guidance	developmental processes	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	axon guidance	cell organization and biogenesis	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	ventral spinal cord development	developmental processes	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	positive regulation of small GTPase mediated signal transduction	signal transduction	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	proteolysis	protein metabolism	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes2_c2564	glial cell differentiation	developmental processes	P	Reelin (EC 3.4.21.-) (Fragment)
ruditapes_c5886	protein prenylation	protein metabolism	P	Geranylgeranyl transferase type-2 subunit alpha (EC 2.5.1.60) (GGTase-II-alpha) (Geranylgeranyl transferase type II subunit alpha) (PGGT) (Type II protein geranyl-geranyltransferase subunit alpha) (YPT1/SEC4 proteins geranylgeranyltransferase subunit alpha)
ruditapes_c3793	positive regulation of GTPase activity	other biological processes	P	Rab proteins geranylgeranyltransferase component A (Rab escort protein) (REP)
ruditapes_c3793	intracellular protein transport	transport	P	Rab proteins geranylgeranyltransferase component A (Rab escort protein) (REP)
ruditapes_c21483	metabolic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_c21483	glutamine catabolic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_c21483	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_c21483	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_s38996	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_s38996	metabolic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_s38996	nitrogen compound metabolic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_s38996	carbamoyl phosphate biosynthetic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_s38996	glutamine catabolic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_c21483	carbamoyl phosphate biosynthetic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_c21483	cellular amino acid metabolic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_s38996	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_c21483	nitrogen compound metabolic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_s38996	cellular amino acid metabolic process	other metabolic processes	P	Protein pyrABCN [Includes: Glutamine-dependent carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)]
ruditapes_c18717	metabolic process	other metabolic processes	P	"Glucan 1,3-beta-glucosidase 2 (EC 3.2.1.58) (Exo-1,3-beta-glucanase 2)"
ruditapes_c18717	cell wall organization	cell organization and biogenesis	P	"Glucan 1,3-beta-glucosidase 2 (EC 3.2.1.58) (Exo-1,3-beta-glucanase 2)"
ruditapes_c18717	carbohydrate metabolic process	other metabolic processes	P	"Glucan 1,3-beta-glucosidase 2 (EC 3.2.1.58) (Exo-1,3-beta-glucanase 2)"
ruditapes_c22577	phosphorylation	other metabolic processes	P	6-phosphofructokinase subunit alpha (EC 2.7.1.11) (6PF-1-K subunit alpha) (CaPFK1) (Phosphofructokinase 1) (Phosphohexokinase)
ruditapes_c22577	metabolic process	other metabolic processes	P	6-phosphofructokinase subunit alpha (EC 2.7.1.11) (6PF-1-K subunit alpha) (CaPFK1) (Phosphofructokinase 1) (Phosphohexokinase)
ruditapes_c22577	glycolysis	other metabolic processes	P	6-phosphofructokinase subunit alpha (EC 2.7.1.11) (6PF-1-K subunit alpha) (CaPFK1) (Phosphofructokinase 1) (Phosphohexokinase)
ruditapes_c11	trehalose biosynthetic process	other metabolic processes	P	"Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) (Trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase)"
ruditapes_c13049	kinetochore assembly	cell organization and biogenesis	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	chromatin remodeling at centromere	cell organization and biogenesis	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	histone deacetylation	protein metabolism	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	histone deacetylation	cell organization and biogenesis	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	protein localization to kinetochore	other biological processes	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	DNA repair	stress response	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	CenH3-containing nucleosome assembly at centromere	cell organization and biogenesis	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	mitotic sister chromatid segregation	cell cycle and proliferation	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	mitotic sister chromatid segregation	cell organization and biogenesis	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	negative regulation of G0 to G1 transition	cell cycle and proliferation	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	DNA repair	DNA metabolism	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	chromatin modification	cell organization and biogenesis	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	response to DNA damage stimulus	stress response	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	regulation of histone deacetylation at centromere	protein metabolism	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c13049	regulation of histone deacetylation at centromere	cell organization and biogenesis	P	Histone acetyltransferase type B subunit 2 (Kinetochore protein mis16)
ruditapes_c29665	ribosomal small subunit assembly	cell organization and biogenesis	P	Probable phospholipid-transporting ATPase C887.12 (EC 3.6.3.1)
ruditapes_c29665	phospholipid translocation	transport	P	Probable phospholipid-transporting ATPase C887.12 (EC 3.6.3.1)
ruditapes_c29665	phospholipid translocation	cell organization and biogenesis	P	Probable phospholipid-transporting ATPase C887.12 (EC 3.6.3.1)
ruditapes_c29665	post-Golgi vesicle-mediated transport	transport	P	Probable phospholipid-transporting ATPase C887.12 (EC 3.6.3.1)
ruditapes_c29665	cation transport	transport	P	Probable phospholipid-transporting ATPase C887.12 (EC 3.6.3.1)
ruditapes_c29665	phospholipid transport	transport	P	Probable phospholipid-transporting ATPase C887.12 (EC 3.6.3.1)
ruditapes_c20727	cAMP-mediated signaling	signal transduction	P	Guanine nucleotide-binding protein subunit gamma
ruditapes_c20727	negative regulation of transcription by glucose	RNA metabolism	P	Guanine nucleotide-binding protein subunit gamma
ruditapes_c20727	cellular response to stress	stress response	P	Guanine nucleotide-binding protein subunit gamma
ruditapes_c20727	signal transduction	signal transduction	P	Guanine nucleotide-binding protein subunit gamma
ruditapes_c20727	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit gamma
ruditapes_c20727	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Guanine nucleotide-binding protein subunit gamma
ruditapes_lrc28648	protein amino acid glycosylation	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3 (Oligosaccharyl transferase subunit stt3) (EC 2.4.99.18)
ruditapes_lrc28648	protein amino acid N-linked glycosylation	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3 (Oligosaccharyl transferase subunit stt3) (EC 2.4.99.18)
ruditapes_c9869	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized transcriptional regulatory protein C417.09c
ruditapes_c9869	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized transcriptional regulatory protein C417.09c
ruditapes_c17430	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor cwf11 (Complexed with cdc5 protein 11)
ruditapes_c13779	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor cwf11 (Complexed with cdc5 protein 11)
ruditapes_c13779	"nuclear mRNA cis splicing, via spliceosome"	RNA metabolism	P	Pre-mRNA-splicing factor cwf11 (Complexed with cdc5 protein 11)
ruditapes_c17430	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor cwf11 (Complexed with cdc5 protein 11)
ruditapes_c17430	"nuclear mRNA cis splicing, via spliceosome"	RNA metabolism	P	Pre-mRNA-splicing factor cwf11 (Complexed with cdc5 protein 11)
ruditapes_c13779	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor cwf11 (Complexed with cdc5 protein 11)
ruditapes_c16515	cell wall organization	cell organization and biogenesis	P	Glutathione S-transferase omega-like 2 (EC 2.5.1.18) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1)
ruditapes_c16515	oxidation reduction	other metabolic processes	P	Glutathione S-transferase omega-like 2 (EC 2.5.1.18) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1)
ruditapes_c16515	cellular response to stress	stress response	P	Glutathione S-transferase omega-like 2 (EC 2.5.1.18) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1)
ruditapes_c7064	tRNA modification	RNA metabolism	P	Elongator complex protein 2
ruditapes_c25343	tRNA modification	RNA metabolism	P	Elongator complex protein 2
ruditapes_c24230	biological_process	other biological processes	P	Putative ATP-dependent RNA helicase ucp12 (EC 3.6.4.13)
ruditapes_c22282	biological_process	other biological processes	P	Putative ATP-dependent RNA helicase ucp12 (EC 3.6.4.13)
ruditapes_c5037	mRNA processing	RNA metabolism	P	Serine/threonine-protein kinase ppk4 (EC 2.7.11.1)
ruditapes_c5037	anti-apoptosis	death	P	Serine/threonine-protein kinase ppk4 (EC 2.7.11.1)
ruditapes_c5037	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase ppk4 (EC 2.7.11.1)
ruditapes_c5037	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ppk4 (EC 2.7.11.1)
ruditapes_c5037	endoplasmic reticulum unfolded protein response	signal transduction	P	Serine/threonine-protein kinase ppk4 (EC 2.7.11.1)
ruditapes_c5037	endoplasmic reticulum unfolded protein response	stress response	P	Serine/threonine-protein kinase ppk4 (EC 2.7.11.1)
ruditapes_c956	cellular response to stress	stress response	P	Uncharacterized protein C23C4.05c
ruditapes_c24832	transport	transport	P	Uncharacterized transporter C1773.15
ruditapes_c24832	transmembrane transport	transport	P	Uncharacterized transporter C1773.15
ruditapes_c20199	RNA splicing	RNA metabolism	P	Ubiquitin-like modifier hub1
ruditapes_c20199	"nuclear mRNA cis splicing, via spliceosome"	RNA metabolism	P	Ubiquitin-like modifier hub1
ruditapes_c20199	cellular protein localization	other biological processes	P	Ubiquitin-like modifier hub1
ruditapes_c20199	mRNA processing	RNA metabolism	P	Ubiquitin-like modifier hub1
ruditapes_c26353	ribosome biogenesis	other biological processes	P	Probable nucleolar GTP-binding protein 1
ruditapes_c26353	ribosome export from nucleus	transport	P	Probable nucleolar GTP-binding protein 1
ruditapes_c36111	actin cortical patch assembly	cell organization and biogenesis	P	UBA domain-containing protein 8
ruditapes_c36111	receptor-mediated endocytosis	transport	P	UBA domain-containing protein 8
ruditapes_c36111	receptor-mediated endocytosis	cell organization and biogenesis	P	UBA domain-containing protein 8
ruditapes_c36111	intracellular protein transport	transport	P	UBA domain-containing protein 8
ruditapes_c36111	endocytosis	transport	P	UBA domain-containing protein 8
ruditapes_c36111	endocytosis	cell organization and biogenesis	P	UBA domain-containing protein 8
ruditapes_c10241	meiosis	cell cycle and proliferation	P	Meiotic expression up-regulated protein 27
ruditapes_c30992	kidney development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	regulation of endothelial cell proliferation	cell cycle and proliferation	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	embryonic gut development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	neuron differentiation	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	neural tube development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	anterior/posterior pattern formation	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	anterior/posterior pattern formation	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	embryonic limb morphogenesis	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	embryonic limb morphogenesis	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	vitamin A metabolic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	response to cytokine stimulus	other biological processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	determination of bilateral symmetry	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	neural tube development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	retinal metabolic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	midgut development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	oxidation reduction	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	pancreas development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	liver development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	vitamin A metabolic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	morphogenesis of embryonic epithelium	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	response to vitamin A	other biological processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	neural crest cell development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	metabolic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	embryonic camera-type eye development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	negative regulation of cell proliferation	cell cycle and proliferation	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	camera-type eye development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	blood vessel development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	heart morphogenesis	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	response to vitamin A	other biological processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	9-cis-retinoic acid biosynthetic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	camera-type eye development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	face development	other biological processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	embryonic camera-type eye development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	response to estradiol stimulus	other biological processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	pancreas development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	response to estradiol stimulus	other biological processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	9-cis-retinoic acid biosynthetic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	liver development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	morphogenesis of embryonic epithelium	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	midgut development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	metabolic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	proximal/distal pattern formation	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	oxidation reduction	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	positive regulation of cell proliferation	cell cycle and proliferation	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	negative regulation of cell proliferation	cell cycle and proliferation	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	determination of bilateral symmetry	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	response to cytokine stimulus	other biological processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	retinal metabolic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	regulation of endothelial cell proliferation	cell cycle and proliferation	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	positive regulation of gene expression	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	embryonic gut development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	positive regulation of gene expression	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	positive regulation of cell proliferation	cell cycle and proliferation	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	retinoic acid metabolic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	lung development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	forebrain development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	kidney development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	retinoic acid receptor signaling pathway	signal transduction	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	retinoic acid metabolic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	neuron differentiation	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	embryonic forelimb morphogenesis	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	face development	other biological processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	proximal/distal pattern formation	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	hindbrain development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	positive regulation of apoptosis	death	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	pituitary gland development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	blood vessel development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	lung development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	heart morphogenesis	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	retinoic acid receptor signaling pathway	signal transduction	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	positive regulation of apoptosis	death	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	forebrain development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	hindbrain development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	embryonic forelimb morphogenesis	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c30992	neural crest cell development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes_c7461	pituitary gland development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))
ruditapes2_c1766	nervous system development	developmental processes	P	Actin-like protein 6B (53 kDa BRG1-associated factor B) (Actin-related protein Baf53b) (ArpNalpha) (BRG1-associated factor 53B) (BAF53B)
ruditapes2_c1766	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	Actin-like protein 6B (53 kDa BRG1-associated factor B) (Actin-related protein Baf53b) (ArpNalpha) (BRG1-associated factor 53B) (BAF53B)
ruditapes2_c1766	chromatin modification	cell organization and biogenesis	P	Actin-like protein 6B (53 kDa BRG1-associated factor B) (Actin-related protein Baf53b) (ArpNalpha) (BRG1-associated factor 53B) (BAF53B)
ruditapes2_c1766	"transcription, DNA-dependent"	RNA metabolism	P	Actin-like protein 6B (53 kDa BRG1-associated factor B) (Actin-related protein Baf53b) (ArpNalpha) (BRG1-associated factor 53B) (BAF53B)
ruditapes2_c1766	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Actin-like protein 6B (53 kDa BRG1-associated factor B) (Actin-related protein Baf53b) (ArpNalpha) (BRG1-associated factor 53B) (BAF53B)
ruditapes2_c1766	chromatin remodeling	cell organization and biogenesis	P	Actin-like protein 6B (53 kDa BRG1-associated factor B) (Actin-related protein Baf53b) (ArpNalpha) (BRG1-associated factor 53B) (BAF53B)
ruditapes2_c1766	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Actin-like protein 6B (53 kDa BRG1-associated factor B) (Actin-related protein Baf53b) (ArpNalpha) (BRG1-associated factor 53B) (BAF53B)
ruditapes_c8192	phospholipid transport	transport	P	Probable phospholipid-transporting ATPase VB (EC 3.6.3.1) (ATPase class V type 10B)
ruditapes_c8192	cation transport	transport	P	Probable phospholipid-transporting ATPase VB (EC 3.6.3.1) (ATPase class V type 10B)
ruditapes_c8192	phospholipid translocation	transport	P	Probable phospholipid-transporting ATPase VB (EC 3.6.3.1) (ATPase class V type 10B)
ruditapes_c8192	phospholipid translocation	cell organization and biogenesis	P	Probable phospholipid-transporting ATPase VB (EC 3.6.3.1) (ATPase class V type 10B)
ruditapes_c16500	axon guidance	developmental processes	P	Neurofascin
ruditapes_c16500	axon guidance	cell organization and biogenesis	P	Neurofascin
ruditapes_c16500	peripheral nervous system development	developmental processes	P	Neurofascin
ruditapes_c16500	paranodal junction assembly	developmental processes	P	Neurofascin
ruditapes_c16500	paranodal junction assembly	cell organization and biogenesis	P	Neurofascin
ruditapes_c16500	transmission of nerve impulse	other biological processes	P	Neurofascin
ruditapes_c16500	synapse organization	cell organization and biogenesis	P	Neurofascin
ruditapes_c16500	cell adhesion	cell adhesion	P	Neurofascin
ruditapes_c16500	myelination	developmental processes	P	Neurofascin
ruditapes_c24616	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein furry homolog-like (ALL1-fused gene from chromosome 4p12 protein)
ruditapes_c15454	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein furry homolog-like (ALL1-fused gene from chromosome 4p12 protein)
ruditapes_c15454	"transcription, DNA-dependent"	RNA metabolism	P	Protein furry homolog-like (ALL1-fused gene from chromosome 4p12 protein)
ruditapes_c24616	"transcription, DNA-dependent"	RNA metabolism	P	Protein furry homolog-like (ALL1-fused gene from chromosome 4p12 protein)
ruditapes_c7348	transport	transport	P	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter B) (OATP-B) (Organic anion transporter polypeptide-related protein 2) (OATP-RP2) (OATPRP2) (Solute carrier family 21 member 9)
ruditapes_c7348	organic anion transport	transport	P	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter B) (OATP-B) (Organic anion transporter polypeptide-related protein 2) (OATP-RP2) (OATPRP2) (Solute carrier family 21 member 9)
ruditapes_c25957	transport	transport	P	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter B) (OATP-B) (Organic anion transporter polypeptide-related protein 2) (OATP-RP2) (OATPRP2) (Solute carrier family 21 member 9)
ruditapes_c7348	sodium-independent organic anion transport	transport	P	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter B) (OATP-B) (Organic anion transporter polypeptide-related protein 2) (OATP-RP2) (OATPRP2) (Solute carrier family 21 member 9)
ruditapes_c25957	sodium-independent organic anion transport	transport	P	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter B) (OATP-B) (Organic anion transporter polypeptide-related protein 2) (OATP-RP2) (OATPRP2) (Solute carrier family 21 member 9)
ruditapes_c25957	organic anion transport	transport	P	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter B) (OATP-B) (Organic anion transporter polypeptide-related protein 2) (OATP-RP2) (OATPRP2) (Solute carrier family 21 member 9)
ruditapes_c7348	ion transport	transport	P	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter B) (OATP-B) (Organic anion transporter polypeptide-related protein 2) (OATP-RP2) (OATPRP2) (Solute carrier family 21 member 9)
ruditapes_c7348	transmembrane transport	transport	P	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter B) (OATP-B) (Organic anion transporter polypeptide-related protein 2) (OATP-RP2) (OATPRP2) (Solute carrier family 21 member 9)
ruditapes_c25957	ion transport	transport	P	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter B) (OATP-B) (Organic anion transporter polypeptide-related protein 2) (OATP-RP2) (OATPRP2) (Solute carrier family 21 member 9)
ruditapes_c25957	transmembrane transport	transport	P	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter B) (OATP-B) (Organic anion transporter polypeptide-related protein 2) (OATP-RP2) (OATPRP2) (Solute carrier family 21 member 9)
ruditapes_c26335	protein polyubiquitination	protein metabolism	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog) (hHYD) (Progestin-induced protein)"
ruditapes_c26335	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog) (hHYD) (Progestin-induced protein)"
ruditapes_c26335	ubiquitin-dependent protein catabolic process	protein metabolism	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog) (hHYD) (Progestin-induced protein)"
ruditapes_c26335	cell proliferation	cell cycle and proliferation	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog) (hHYD) (Progestin-induced protein)"
ruditapes_c26335	progesterone receptor signaling pathway	signal transduction	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog) (hHYD) (Progestin-induced protein)"
ruditapes_c26335	protein modification process	protein metabolism	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog) (hHYD) (Progestin-induced protein)"
ruditapes_c26335	protein ubiquitination	protein metabolism	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog) (hHYD) (Progestin-induced protein)"
ruditapes_c26335	"positive regulation of protein import into nucleus, translocation"	transport	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog) (hHYD) (Progestin-induced protein)"
ruditapes_c26335	response to DNA damage stimulus	stress response	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog) (hHYD) (Progestin-induced protein)"
ruditapes_c29039	regulation of ARF GTPase activity	signal transduction	P	Arf-GAP domain and FG repeat-containing protein 2 (HIV-1 Rev-binding protein-like protein) (Rev/Rex activation domain-binding protein related) (RAB-R)
ruditapes_c29039	biological_process	other biological processes	P	Arf-GAP domain and FG repeat-containing protein 2 (HIV-1 Rev-binding protein-like protein) (Rev/Rex activation domain-binding protein related) (RAB-R)
ruditapes_c33042	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c33042	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c33042	respiratory electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c33042	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_s38759	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc4867	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_c3680	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s38759	respiratory electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_c3680	respiratory electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s38759	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc4867	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc5104	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc5104	respiratory electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc4867	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_lrc32806	respiratory electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_lrc32806	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_lrc32806	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_lrc32806	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc5104	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_c3680	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc5104	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc4867	respiratory electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_c3680	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s38759	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_c424	multicellular organismal development	developmental processes	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_c424	regulation of cell cycle	cell cycle and proliferation	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_c424	activation of MAPKK activity	signal transduction	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_c424	activation of MAPKK activity	protein metabolism	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_c424	apoptosis	death	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_c424	cell differentiation	other biological processes	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_c424	DNA repair	DNA metabolism	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_c424	negative regulation of protein kinase activity	other metabolic processes	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_c424	DNA repair	stress response	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_c424	activation of MAPKKK activity	signal transduction	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_c424	activation of MAPKKK activity	other metabolic processes	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_c424	response to stress	stress response	P	Growth arrest and DNA damage-inducible protein GADD45 gamma (Cytokine-responsive protein CR6) (DNA damage-inducible transcript 2 protein) (DDIT-2)
ruditapes2_lrc3732	regulation of small GTPase mediated signal transduction	signal transduction	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes_lrc39818	blood coagulation	stress response	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes_lrc39818	cell differentiation	other biological processes	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes_lrc39818	signal transduction	signal transduction	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes2_lrc3732	blood coagulation	stress response	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes2_lrc3732	signal transduction	signal transduction	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes2_lrc3732	platelet activation	stress response	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes2_lrc3732	Ras protein signal transduction	signal transduction	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes_lrc39818	Ras protein signal transduction	signal transduction	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes2_lrc3732	small GTPase mediated signal transduction	signal transduction	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes_lrc39818	small GTPase mediated signal transduction	signal transduction	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes_lrc39818	regulation of small GTPase mediated signal transduction	signal transduction	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes2_lrc3732	cell differentiation	other biological processes	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes_lrc39818	platelet activation	stress response	P	RAS guanyl-releasing protein 1 (Calcium and DAG-regulated guanine nucleotide exchange factor II) (CalDAG-GEFII) (Ras guanyl-releasing protein)
ruditapes_c10024	signal transduction	signal transduction	P	Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7)
ruditapes_c10024	protein import into nucleus	transport	P	Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7)
ruditapes_c10024	intracellular protein transport	transport	P	Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7)
ruditapes_c10024	transport	transport	P	Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7)
ruditapes_c10024	interspecies interaction between organisms	other biological processes	P	Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7)
ruditapes_c10024	protein transport	transport	P	Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7)
ruditapes2_c244	signal transduction	signal transduction	P	WNT1-inducible-signaling pathway protein 1 (WISP-1) (CCN family member 4) (Wnt-1-induced secreted protein)
ruditapes2_c244	cell adhesion	cell adhesion	P	WNT1-inducible-signaling pathway protein 1 (WISP-1) (CCN family member 4) (Wnt-1-induced secreted protein)
ruditapes2_c244	cell-cell signaling	cell-cell signaling	P	WNT1-inducible-signaling pathway protein 1 (WISP-1) (CCN family member 4) (Wnt-1-induced secreted protein)
ruditapes2_c244	Wnt receptor signaling pathway	signal transduction	P	WNT1-inducible-signaling pathway protein 1 (WISP-1) (CCN family member 4) (Wnt-1-induced secreted protein)
ruditapes2_c244	regulation of cell growth	other biological processes	P	WNT1-inducible-signaling pathway protein 1 (WISP-1) (CCN family member 4) (Wnt-1-induced secreted protein)
ruditapes_c16104	anti-apoptosis	death	P	BAG family molecular chaperone regulator 4 (BAG-4) (Bcl-2-associated athanogene 4) (Silencer of death domains)
ruditapes_c16104	protein folding	protein metabolism	P	BAG family molecular chaperone regulator 4 (BAG-4) (Bcl-2-associated athanogene 4) (Silencer of death domains)
ruditapes2_c331	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein NSA2 homolog (Hairy cell leukemia protein 1) (TGF-beta-inducible nuclear protein 1)
ruditapes2_c331	rRNA processing	RNA metabolism	P	Ribosome biogenesis protein NSA2 homolog (Hairy cell leukemia protein 1) (TGF-beta-inducible nuclear protein 1)
ruditapes_c4328	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein NSA2 homolog (Hairy cell leukemia protein 1) (TGF-beta-inducible nuclear protein 1)
ruditapes_c4328	rRNA processing	RNA metabolism	P	Ribosome biogenesis protein NSA2 homolog (Hairy cell leukemia protein 1) (TGF-beta-inducible nuclear protein 1)
ruditapes_c27686	rRNA processing	RNA metabolism	P	Ribosome biogenesis protein NSA2 homolog (Hairy cell leukemia protein 1) (TGF-beta-inducible nuclear protein 1)
ruditapes_c17676	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein NSA2 homolog (Hairy cell leukemia protein 1) (TGF-beta-inducible nuclear protein 1)
ruditapes_c27686	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein NSA2 homolog (Hairy cell leukemia protein 1) (TGF-beta-inducible nuclear protein 1)
ruditapes_c17676	rRNA processing	RNA metabolism	P	Ribosome biogenesis protein NSA2 homolog (Hairy cell leukemia protein 1) (TGF-beta-inducible nuclear protein 1)
ruditapes_s39216	neuropeptide signaling pathway	signal transduction	P	Latrophilin-2 (Calcium-independent alpha-latrotoxin receptor 2) (CIRL-2) (Latrophilin homolog 1) (Lectomedin-1)
ruditapes_s39216	signal transduction	signal transduction	P	Latrophilin-2 (Calcium-independent alpha-latrotoxin receptor 2) (CIRL-2) (Latrophilin homolog 1) (Lectomedin-1)
ruditapes_s39216	cell surface receptor linked signal transduction	signal transduction	P	Latrophilin-2 (Calcium-independent alpha-latrotoxin receptor 2) (CIRL-2) (Latrophilin homolog 1) (Lectomedin-1)
ruditapes_s39216	G-protein coupled receptor protein signaling pathway	signal transduction	P	Latrophilin-2 (Calcium-independent alpha-latrotoxin receptor 2) (CIRL-2) (Latrophilin homolog 1) (Lectomedin-1)
ruditapes2_c1091	vesicle-mediated transport	transport	P	Vesicle transport protein SFT2B (SFT2 domain-containing protein 2)
ruditapes2_c1091	protein transport	transport	P	Vesicle transport protein SFT2B (SFT2 domain-containing protein 2)
ruditapes2_c1091	transport	transport	P	Vesicle transport protein SFT2B (SFT2 domain-containing protein 2)
ruditapes2_c2223	transcription from RNA polymerase II promoter	RNA metabolism	P	"Nuclear factor of activated T-cells, cytoplasmic 1 (NF-ATc1) (NFATc1) (NFAT transcription complex cytosolic component) (NF-ATc) (NFATc)"
ruditapes2_c2223	"transcription, DNA-dependent"	RNA metabolism	P	"Nuclear factor of activated T-cells, cytoplasmic 1 (NF-ATc1) (NFATc1) (NFAT transcription complex cytosolic component) (NF-ATc) (NFATc)"
ruditapes2_c2223	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Nuclear factor of activated T-cells, cytoplasmic 1 (NF-ATc1) (NFATc1) (NFAT transcription complex cytosolic component) (NF-ATc) (NFATc)"
ruditapes2_c2223	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	"Nuclear factor of activated T-cells, cytoplasmic 1 (NF-ATc1) (NFATc1) (NFAT transcription complex cytosolic component) (NF-ATc) (NFATc)"
ruditapes2_c2223	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	"Nuclear factor of activated T-cells, cytoplasmic 1 (NF-ATc1) (NFATc1) (NFAT transcription complex cytosolic component) (NF-ATc) (NFATc)"
ruditapes_c28086	biological_process	other biological processes	P	N-acetylserotonin O-methyltransferase-like protein (ASMTL)
ruditapes_c16404	biological_process	other biological processes	P	N-acetylserotonin O-methyltransferase-like protein (ASMTL)
ruditapes_c7987	biological_process	other biological processes	P	N-acetylserotonin O-methyltransferase-like protein (ASMTL)
ruditapes2_c572	cell adhesion	cell adhesion	P	Claudin-1 (Senescence-associated epithelial membrane protein)
ruditapes2_c572	calcium-independent cell-cell adhesion	cell adhesion	P	Claudin-1 (Senescence-associated epithelial membrane protein)
ruditapes2_c572	interspecies interaction between organisms	other biological processes	P	Claudin-1 (Senescence-associated epithelial membrane protein)
ruditapes_c22092	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Angiopoietin-related protein 1 (Angiopoietin-3) (ANG-3) (Angiopoietin-like protein 1)
ruditapes_c18001	signal transduction	signal transduction	P	Angiopoietin-related protein 1 (Angiopoietin-3) (ANG-3) (Angiopoietin-like protein 1)
ruditapes_c18001	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Angiopoietin-related protein 1 (Angiopoietin-3) (ANG-3) (Angiopoietin-like protein 1)
ruditapes_c22092	signal transduction	signal transduction	P	Angiopoietin-related protein 1 (Angiopoietin-3) (ANG-3) (Angiopoietin-like protein 1)
ruditapes2_lrc6441	signal transduction	signal transduction	P	Guanylyl cyclase-activating protein 3 (GCAP 3) (Guanylate cyclase activator 1C)
ruditapes2_lrc6441	visual perception	other biological processes	P	Guanylyl cyclase-activating protein 3 (GCAP 3) (Guanylate cyclase activator 1C)
ruditapes_c28116	negative regulation of cell proliferation	cell cycle and proliferation	P	Growth arrest-specific protein 8 (GAS-8) (Growth arrest-specific protein 11) (GAS-11)
ruditapes_c28116	sperm motility	other biological processes	P	Growth arrest-specific protein 8 (GAS-8) (Growth arrest-specific protein 11) (GAS-11)
ruditapes_c12178	cell adhesion	cell adhesion	P	Defective in tip formation protein A (Cell surface protein dtfA)
ruditapes_c12178	cell division	other biological processes	P	Defective in tip formation protein A (Cell surface protein dtfA)
ruditapes_c12178	multicellular organismal development	developmental processes	P	Defective in tip formation protein A (Cell surface protein dtfA)
ruditapes_c12178	cell cycle	cell cycle and proliferation	P	Defective in tip formation protein A (Cell surface protein dtfA)
ruditapes_lrc35171	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_lrc35171	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc5711	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc5711	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_lrc9391	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_lrc32139	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_lrc20700	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_c447	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_lrc32139	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_lrc20700	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc4124	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc4124	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_lrc14758	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_lrc14758	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc4734	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc4734	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc3247	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_c447	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_lrc9391	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_c20371	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_c20371	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc3247	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc4190	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc4190	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc4428	negative regulation of coagulation	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes2_lrc4428	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor dipetalogastin (Dipetalin) (Fragment)
ruditapes_s40090	proteolysis	protein metabolism	P	M1 family aminopeptidase (EC 3.4.11.-) (Pfa-M1)
ruditapes2_c857	electron transport chain	other metabolic processes	P	Thioredoxin (Trx)
ruditapes2_c3098	cell redox homeostasis	other biological processes	P	Thioredoxin (Trx)
ruditapes2_c857	cell redox homeostasis	other biological processes	P	Thioredoxin (Trx)
ruditapes2_c857	glycerol ether metabolic process	other metabolic processes	P	Thioredoxin (Trx)
ruditapes2_c3098	electron transport chain	other metabolic processes	P	Thioredoxin (Trx)
ruditapes2_c372	glycerol ether metabolic process	other metabolic processes	P	Thioredoxin (Trx)
ruditapes2_c372	cell redox homeostasis	other biological processes	P	Thioredoxin (Trx)
ruditapes2_c372	electron transport chain	other metabolic processes	P	Thioredoxin (Trx)
ruditapes2_c3098	transport	transport	P	Thioredoxin (Trx)
ruditapes2_c857	transport	transport	P	Thioredoxin (Trx)
ruditapes2_c3098	glycerol ether metabolic process	other metabolic processes	P	Thioredoxin (Trx)
ruditapes2_c372	transport	transport	P	Thioredoxin (Trx)
ruditapes_c29626	protein targeting to Golgi	transport	P	GRIP and coiled-coil domain-containing protein PFC0235w
ruditapes_c9544	neuropeptide signaling pathway	signal transduction	P	Small cardioactive peptides [Cleaved into: Small cardioactive peptide B (SCP B) (SCPb); Small cardioactive peptide A (SCP A) (SCPa)]
ruditapes_c21236	neuropeptide signaling pathway	signal transduction	P	Crustacean hyperglycemic hormones 1 (Pm-SGP-I) [Cleaved into: CHH precursor-related peptide 1 (CPRP 1); Crustacean hyperglycemic hormone 1 (CHH 1)]
ruditapes_c21236	carbohydrate metabolic process	other metabolic processes	P	Crustacean hyperglycemic hormones 1 (Pm-SGP-I) [Cleaved into: CHH precursor-related peptide 1 (CPRP 1); Crustacean hyperglycemic hormone 1 (CHH 1)]
ruditapes_c21236	glucose metabolic process	other metabolic processes	P	Crustacean hyperglycemic hormones 1 (Pm-SGP-I) [Cleaved into: CHH precursor-related peptide 1 (CPRP 1); Crustacean hyperglycemic hormone 1 (CHH 1)]
ruditapes_c17708	carbohydrate metabolic process	other metabolic processes	P	Beta-glucuronidase (EC 3.2.1.31)
ruditapes_c17708	metabolic process	other metabolic processes	P	Beta-glucuronidase (EC 3.2.1.31)
ruditapes2_c778	negative regulation of catalytic activity	other biological processes	P	Metalloproteinase inhibitor 4 (Tissue inhibitor of metalloproteinases 4) (TIMP-4) (Fragment)
ruditapes_c24082	positive regulation of MAPKKK cascade	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	myeloid progenitor cell differentiation	developmental processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	glycosphingolipid metabolic process	other metabolic processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	hemopoiesis	developmental processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	male gonad development	developmental processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	response to radiation	other biological processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	protein kinase cascade	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	activation of MAPK activity	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	activation of MAPK activity	protein metabolism	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	positive regulation of MAP kinase activity	other metabolic processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	positive regulation of tyrosine phosphorylation of Stat3 protein	protein metabolism	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	positive regulation of cell proliferation	cell cycle and proliferation	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	germ cell programmed cell death	death	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	peptidyl-tyrosine phosphorylation	protein metabolism	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	protein amino acid autophosphorylation	protein metabolism	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	regulation of pigmentation during development	other biological processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	positive regulation of tyrosine phosphorylation of Stat5 protein	protein metabolism	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	protein amino acid phosphorylation	protein metabolism	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	lymphoid progenitor cell differentiation	developmental processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	spermatid development	other biological processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	pigmentation during development	other biological processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	positive regulation of tyrosine phosphorylation of Stat3 protein	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	negative regulation of programmed cell death	death	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	positive regulation of tyrosine phosphorylation of Stat1 protein	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	positive regulation of tyrosine phosphorylation of Stat1 protein	protein metabolism	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	positive regulation of JAK-STAT cascade	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	positive regulation of transcription factor activity	RNA metabolism	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	positive regulation of tyrosine phosphorylation of Stat5 protein	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	pigmentation	other biological processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	phosphorylation	other metabolic processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	positive regulation of gene expression	other metabolic processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	myeloid leukocyte differentiation	developmental processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	cytokine-mediated signaling pathway	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c24082	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c23564	signal transduction	signal transduction	P	Bombesin receptor subtype-3 (BRS-3)
ruditapes_c23564	G-protein coupled receptor protein signaling pathway	signal transduction	P	Bombesin receptor subtype-3 (BRS-3)
ruditapes_c23564	bombesin receptor signaling pathway	signal transduction	P	Bombesin receptor subtype-3 (BRS-3)
ruditapes_c2796	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
ruditapes_c2796	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
ruditapes_c2796	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
ruditapes_c2796	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
ruditapes_c2796	transport	transport	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
ruditapes_lrc25552	electron transport chain	other metabolic processes	P	Cytochrome c
ruditapes_lrc25552	transport	transport	P	Cytochrome c
ruditapes_lrc25552	apoptosis	death	P	Cytochrome c
ruditapes_lrc25552	DNA fragmentation involved in apoptosis	DNA metabolism	P	Cytochrome c
ruditapes_lrc25552	DNA fragmentation involved in apoptosis	cell organization and biogenesis	P	Cytochrome c
ruditapes_lrc25552	DNA fragmentation involved in apoptosis	death	P	Cytochrome c
ruditapes_c20558	electron transport chain	other metabolic processes	P	Cytochrome c
ruditapes_c20558	transport	transport	P	Cytochrome c
ruditapes_c3439	electron transport chain	other metabolic processes	P	"Cytochrome c1, heme protein, mitochondrial (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1)"
ruditapes_c3439	transport	transport	P	"Cytochrome c1, heme protein, mitochondrial (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1)"
ruditapes_c13770	anaerobic respiration	other metabolic processes	P	Cytochrome c3
ruditapes_c13770	electron transport chain	other metabolic processes	P	Cytochrome c3
ruditapes_c13770	transport	transport	P	Cytochrome c3
ruditapes_c21499	transport	transport	P	Cytochrome b5
ruditapes_c21499	electron transport chain	other metabolic processes	P	Cytochrome b5
ruditapes_c3894	electron transport chain	other metabolic processes	P	Cytochrome b5
ruditapes_c3894	transport	transport	P	Cytochrome b5
ruditapes_c3894	response to cadmium ion	other biological processes	P	Cytochrome b5
ruditapes_c25212	transport	transport	P	Plastocyanin
ruditapes_c25212	electron transport chain	other metabolic processes	P	Plastocyanin
ruditapes2_c3082	oxidation reduction	other metabolic processes	P	Dihydrofolate reductase (EC 1.5.1.3)
ruditapes2_c3082	tetrahydrofolate metabolic process	other metabolic processes	P	Dihydrofolate reductase (EC 1.5.1.3)
ruditapes2_c3082	nucleotide biosynthetic process	other metabolic processes	P	Dihydrofolate reductase (EC 1.5.1.3)
ruditapes2_c3082	response to methotrexate	other biological processes	P	Dihydrofolate reductase (EC 1.5.1.3)
ruditapes2_c3082	one-carbon compound metabolic process	other metabolic processes	P	Dihydrofolate reductase (EC 1.5.1.3)
ruditapes2_c3082	glycine biosynthetic process	other metabolic processes	P	Dihydrofolate reductase (EC 1.5.1.3)
ruditapes_c22743	positive regulation of cell division	other biological processes	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	response to reactive oxygen species	stress response	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	protein tetramerization	cell organization and biogenesis	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	cholesterol metabolic process	other metabolic processes	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	triglyceride metabolic process	other metabolic processes	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	hemoglobin metabolic process	protein metabolism	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	hydrogen peroxide catabolic process	other metabolic processes	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	UV protection	other biological processes	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	response to oxidative stress	stress response	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	positive regulation of phosphoinositide 3-kinase cascade	signal transduction	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	negative regulation of apoptosis	death	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	aerobic respiration	other metabolic processes	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	oxidation reduction	other metabolic processes	P	Catalase (EC 1.11.1.6)
ruditapes_c22743	hydrogen peroxide catabolic process	stress response	P	Catalase (EC 1.11.1.6)
ruditapes_c3345	DNA methylation on adenine	DNA metabolism	P	Modification methylase EcoRI (M.EcoRI) (EC 2.1.1.72) (Adenine-specific methyltransferase EcoRI)
ruditapes_c3345	DNA restriction-modification system	DNA metabolism	P	Modification methylase EcoRI (M.EcoRI) (EC 2.1.1.72) (Adenine-specific methyltransferase EcoRI)
ruditapes_c3345	methylation	other metabolic processes	P	Modification methylase EcoRI (M.EcoRI) (EC 2.1.1.72) (Adenine-specific methyltransferase EcoRI)
ruditapes_lrc35442	response to antibiotic	other biological processes	P	Chloramphenicol acetyltransferase (CAT) (EC 2.3.1.28) (Cat-86)
ruditapes2_lrc5803	response to antibiotic	other biological processes	P	Chloramphenicol acetyltransferase (CAT) (EC 2.3.1.28) (Cat-86)
ruditapes_lrc6963	response to antibiotic	other biological processes	P	Chloramphenicol acetyltransferase (CAT) (EC 2.3.1.28) (Cat-86)
ruditapes2_lrc5236	response to antibiotic	other biological processes	P	Chloramphenicol acetyltransferase (CAT) (EC 2.3.1.28) (Cat-86)
ruditapes_lrc32296	response to antibiotic	other biological processes	P	Chloramphenicol acetyltransferase (CAT) (EC 2.3.1.28) (Cat-86)
ruditapes_lrc34610	response to antibiotic	other biological processes	P	Chloramphenicol acetyltransferase (CAT) (EC 2.3.1.28) (Cat-86)
ruditapes_lrc34844	response to antibiotic	other biological processes	P	Chloramphenicol acetyltransferase (CAT) (EC 2.3.1.28) (Cat-86)
ruditapes2_lrc3291	response to antibiotic	other biological processes	P	Chloramphenicol acetyltransferase (CAT) (EC 2.3.1.28) (Cat-86)
ruditapes_lrc33867	response to antibiotic	other biological processes	P	Chloramphenicol acetyltransferase (CAT) (EC 2.3.1.28) (Cat-86)
ruditapes2_c2205	2-oxoglutarate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes2_c2205	gluconeogenesis	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes2_c2205	cellular amino acid metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c22318	2-oxoglutarate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c22318	carbohydrate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c22318	gluconeogenesis	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c22318	aspartate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes2_c2205	glutamate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes2_c2205	biosynthetic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes2_c2205	aspartate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes2_c2205	carbohydrate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c22318	biosynthetic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c22318	cellular amino acid metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c22318	glutamate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c17152	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase transforming protein Src (EC 2.7.10.2) (pp60v-src) (p60-Src) (v-Src)
ruditapes_c17152	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase transforming protein Src (EC 2.7.10.2) (pp60v-src) (p60-Src) (v-Src)
ruditapes2_c2194	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase transforming protein Fps (EC 2.7.10.2)
ruditapes2_c2194	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase transforming protein Fps (EC 2.7.10.2)
ruditapes2_c2194	viral reproduction	other biological processes	P	Tyrosine-protein kinase transforming protein Fps (EC 2.7.10.2)
ruditapes_c11025	lipid catabolic process	other metabolic processes	P	Basic phospholipase A2 taipoxin alpha chain (svPLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_c11025	phospholipid metabolic process	other metabolic processes	P	Basic phospholipase A2 taipoxin alpha chain (svPLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_c20980	lipid biosynthetic process	other metabolic processes	P	"S-acyl fatty acid synthase thioesterase, medium chain (EC 3.1.2.14) (Thioesterase II)"
ruditapes_c20980	biosynthetic process	other metabolic processes	P	"S-acyl fatty acid synthase thioesterase, medium chain (EC 3.1.2.14) (Thioesterase II)"
ruditapes_c20980	fatty acid biosynthetic process	other metabolic processes	P	"S-acyl fatty acid synthase thioesterase, medium chain (EC 3.1.2.14) (Thioesterase II)"
ruditapes_c10778	DNA catabolic process	DNA metabolism	P	Deoxyribonuclease-1 (EC 3.1.21.1) (Deoxyribonuclease I) (DNase I)
ruditapes_c10778	apoptosis	death	P	Deoxyribonuclease-1 (EC 3.1.21.1) (Deoxyribonuclease I) (DNase I)
ruditapes2_c81	cytolysis	death	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c6199	cytolysis	death	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c2395	cell wall macromolecule catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c2869	cytolysis	death	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c81	peptidoglycan catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c3568	peptidoglycan catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c3347	cell wall macromolecule catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c3347	cytolysis	death	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c81	defense response to bacterium	stress response	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c2869	peptidoglycan catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c2395	defense response to bacterium	stress response	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c3347	peptidoglycan catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c3568	cell wall macromolecule catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c3347	metabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c6199	defense response to bacterium	stress response	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c3568	metabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c6199	cell wall macromolecule catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c3347	defense response to bacterium	stress response	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c3568	defense response to bacterium	stress response	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c6199	peptidoglycan catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c2869	metabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c81	metabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c2395	peptidoglycan catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c2869	cell wall macromolecule catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c2395	cytolysis	death	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c2395	metabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c81	cell wall macromolecule catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c3568	cytolysis	death	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c6199	metabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes2_c2869	defense response to bacterium	stress response	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes_c19551	proteolysis	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	response to wounding	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	response to wounding	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	positive regulation of collagen biosynthetic process	other metabolic processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	regulation of cell shape	cell organization and biogenesis	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	peptidyl-glutamic acid carboxylation	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	regulation of cell shape	cell organization and biogenesis	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	negative regulation of fibrinolysis	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	regulation of blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	response to stress	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	cellular protein metabolic process	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	cell surface receptor linked signal transduction	signal transduction	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	proteolysis	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	leukocyte migration	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	fibrinolysis	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	cytosolic calcium ion homeostasis	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	negative regulation of proteolysis	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	negative regulation of proteolysis	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	multicellular organismal development	developmental processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	positive regulation of cell proliferation	cell cycle and proliferation	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	platelet activation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	acute-phase response	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	cytosolic calcium ion homeostasis	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	positive regulation of cell growth	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	negative regulation of fibrinolysis	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	negative regulation of platelet activation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	multicellular organismal development	developmental processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	positive regulation of blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	post-translational protein modification	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	negative regulation of astrocyte differentiation	developmental processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	cell surface receptor linked signal transduction	signal transduction	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	fibrinolysis	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	positive regulation of phosphoinositide 3-kinase cascade	signal transduction	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	positive regulation of cell proliferation	cell cycle and proliferation	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	negative regulation of astrocyte differentiation	developmental processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	peptidyl-glutamic acid carboxylation	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	positive regulation of cell growth	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	cellular protein metabolic process	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	leukocyte migration	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	regulation of blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	metabolic process	other metabolic processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	positive regulation of phosphoinositide 3-kinase cascade	signal transduction	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	platelet activation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	negative regulation of platelet activation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	metabolic process	other metabolic processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	"blood coagulation, intrinsic pathway"	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	response to stress	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	"blood coagulation, intrinsic pathway"	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	positive regulation of blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	post-translational protein modification	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19448	positive regulation of collagen biosynthetic process	other metabolic processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c19551	acute-phase response	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	positive regulation of cell proliferation	cell cycle and proliferation	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	proteolysis	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	acute-phase response	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	cytosolic calcium ion homeostasis	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	negative regulation of astrocyte differentiation	developmental processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	cytosolic calcium ion homeostasis	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	positive regulation of phosphoinositide 3-kinase cascade	signal transduction	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	proteolysis	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	positive regulation of blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	positive regulation of cell growth	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	positive regulation of blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	positive regulation of collagen biosynthetic process	other metabolic processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	regulation of cell shape	cell organization and biogenesis	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	response to wounding	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	metabolic process	other metabolic processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	positive regulation of phosphoinositide 3-kinase cascade	signal transduction	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	negative regulation of proteolysis	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	metabolic process	other metabolic processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	positive regulation of cell growth	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	negative regulation of proteolysis	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	positive regulation of cell proliferation	cell cycle and proliferation	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	cell surface receptor linked signal transduction	signal transduction	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	cell surface receptor linked signal transduction	signal transduction	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	fibrinolysis	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	negative regulation of astrocyte differentiation	developmental processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	acute-phase response	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	fibrinolysis	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	regulation of cell shape	cell organization and biogenesis	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	positive regulation of collagen biosynthetic process	other metabolic processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	platelet activation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c25879	platelet activation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_c14801	response to wounding	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes_lrc36306	digestion	other biological processes	P	Cationic trypsin (EC 3.4.21.4) (Beta-trypsin) [Cleaved into: Alpha-trypsin chain 1; Alpha-trypsin chain 2]
ruditapes_lrc33603	digestion	other biological processes	P	Cationic trypsin (EC 3.4.21.4) (Beta-trypsin) [Cleaved into: Alpha-trypsin chain 1; Alpha-trypsin chain 2]
ruditapes_lrc36306	proteolysis	protein metabolism	P	Cationic trypsin (EC 3.4.21.4) (Beta-trypsin) [Cleaved into: Alpha-trypsin chain 1; Alpha-trypsin chain 2]
ruditapes_lrc33603	proteolysis	protein metabolism	P	Cationic trypsin (EC 3.4.21.4) (Beta-trypsin) [Cleaved into: Alpha-trypsin chain 1; Alpha-trypsin chain 2]
ruditapes_c2669	digestion	other biological processes	P	Trypsin-1 (EC 3.4.21.4) (Trypsin I)
ruditapes_c2669	proteolysis	protein metabolism	P	Trypsin-1 (EC 3.4.21.4) (Trypsin I)
ruditapes2_c3102	proteolysis	protein metabolism	P	Trypsin-1 (EC 3.4.21.4) (Trypsin I)
ruditapes2_c3102	digestion	other biological processes	P	Trypsin-1 (EC 3.4.21.4) (Trypsin I)
ruditapes_c885	proteolysis	protein metabolism	P	Chymotrypsinogen A (EC 3.4.21.1) [Cleaved into: Chymotrypsin A chain A; Chymotrypsin A chain B; Chymotrypsin A chain C]
ruditapes_lrc37163	digestion	other biological processes	P	Chymotrypsinogen A (EC 3.4.21.1) [Cleaved into: Chymotrypsin A chain A; Chymotrypsin A chain B; Chymotrypsin A chain C]
ruditapes_lrc33573	digestion	other biological processes	P	Chymotrypsinogen A (EC 3.4.21.1) [Cleaved into: Chymotrypsin A chain A; Chymotrypsin A chain B; Chymotrypsin A chain C]
ruditapes_lrc37163	proteolysis	protein metabolism	P	Chymotrypsinogen A (EC 3.4.21.1) [Cleaved into: Chymotrypsin A chain A; Chymotrypsin A chain B; Chymotrypsin A chain C]
ruditapes_lrc33573	proteolysis	protein metabolism	P	Chymotrypsinogen A (EC 3.4.21.1) [Cleaved into: Chymotrypsin A chain A; Chymotrypsin A chain B; Chymotrypsin A chain C]
ruditapes_c885	digestion	other biological processes	P	Chymotrypsinogen A (EC 3.4.21.1) [Cleaved into: Chymotrypsin A chain A; Chymotrypsin A chain B; Chymotrypsin A chain C]
ruditapes2_c1327	proteolysis	protein metabolism	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes2_c848	response to glucose stimulus	other biological processes	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	response to stress	stress response	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	response to amine stimulus	other biological processes	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	regulation of catalytic activity	other biological processes	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	autophagy	other metabolic processes	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	proteolysis	protein metabolism	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	negative regulation of cell death	death	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	response to cytokine stimulus	other biological processes	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	response to mechanical stimulus	other biological processes	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	response to ethanol	other biological processes	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	response to wounding	stress response	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	skeletal muscle tissue development	developmental processes	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	response to interleukin-4	other biological processes	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	response to organic cyclic substance	other biological processes	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c848	response to peptide hormone stimulus	other biological processes	P	Cathepsin B (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes_lrc30782	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc30782	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc30782	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc30782	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc30782	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc30782	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc30782	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc30782	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc30782	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35685	methylation	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_lrc35685	'de novo' IMP biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_lrc35685	biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_lrc35685	metabolic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_lrc35685	purine nucleotide biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_lrc35685	purine base biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c17604	DNA repair	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c17604	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c17604	DNA ligation during DNA repair	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c17604	DNA ligation during DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c17604	DNA recombination	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c17604	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c17604	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c2237	negative regulation of peptidase activity	other biological processes	P	Chelonianin (Basic protease inhibitor) (RTPI)
ruditapes_c4736	negative regulation of peptidase activity	other biological processes	P	Chelonianin (Basic protease inhibitor) (RTPI)
ruditapes_c11019	negative regulation of peptidase activity	other biological processes	P	Pancreatic secretory trypsin inhibitor (Serine protease inhibitor Kazal-type 1)
ruditapes2_c425	negative regulation of peptidase activity	other biological processes	P	Pancreatic secretory trypsin inhibitor (Serine protease inhibitor Kazal-type 1)
ruditapes_lrc37349	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Kazal-type 6 (Acrosin inhibitor 2) (Acrosin inhibitor IIA) (BUSI-II)
ruditapes_c5919	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Kazal-type 6 (Acrosin inhibitor 2) (Acrosin inhibitor IIA) (BUSI-II)
ruditapes2_c88	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Kazal-type 6 (Acrosin inhibitor 2) (Acrosin inhibitor IIA) (BUSI-II)
ruditapes2_c663	negative regulation of peptidase activity	other biological processes	P	Ovomucoid
ruditapes_c3751	negative regulation of peptidase activity	other biological processes	P	Ovomucoid
ruditapes_c9299	negative regulation of peptidase activity	other biological processes	P	Ovomucoid (Allergen Gal d I) (allergen Gal d 1)
ruditapes_c10971	negative regulation of peptidase activity	other biological processes	P	Ovomucoid (Allergen Gal d I) (allergen Gal d 1)
ruditapes_lrc35710	negative regulation of peptidase activity	other biological processes	P	Ovomucoid (Allergen Gal d I) (allergen Gal d 1)
ruditapes_c31151	regulation of immune response	other biological processes	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	negative regulation of endopeptidase activity	other biological processes	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	positive regulation of angiogenesis	developmental processes	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	"complement activation, alternative pathway"	protein metabolism	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	signal transduction	signal transduction	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	inflammatory response	stress response	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	positive regulation of type IIa hypersensitivity	stress response	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	positive regulation of phagocytosis	transport	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	positive regulation of phagocytosis	cell organization and biogenesis	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	complement activation	stress response	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	complement activation	protein metabolism	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	"complement activation, alternative pathway"	stress response	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	"complement activation, classical pathway"	protein metabolism	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	immune response	other biological processes	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	positive regulation of activation of membrane attack complex	stress response	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	positive regulation of activation of membrane attack complex	protein metabolism	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	positive regulation of activation of membrane attack complex	death	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	G-protein coupled receptor protein signaling pathway	signal transduction	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	positive regulation vascular endothelial growth factor production	other biological processes	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	innate immune response	stress response	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c31151	"complement activation, classical pathway"	stress response	P	Complement C3 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1) [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Acylation stimulating protein (ASP) (C3adesArg); Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Complement C3f fragment; Complement C3c alpha' chain fragment 2]
ruditapes_c14681	positive regulation of angiogenesis	developmental processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	"complement activation, alternative pathway"	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	"complement activation, alternative pathway"	protein metabolism	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	"complement activation, classical pathway"	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	"complement activation, classical pathway"	protein metabolism	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	negative regulation of macrophage chemotaxis	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	in utero embryonic development	developmental processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	negative regulation of norepinephrine secretion	transport	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	negative regulation of macrophage chemotaxis	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	cytolysis	death	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	"complement activation, classical pathway"	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	"complement activation, classical pathway"	protein metabolism	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	chemotaxis	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	complement activation	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	complement activation	protein metabolism	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	innate immune response	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	positive regulation of angiogenesis	developmental processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	G-protein coupled receptor protein signaling pathway	signal transduction	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	chemotaxis	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	leukocyte migration during inflammatory response	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	positive regulation of chemotaxis	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	glucose homeostasis	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	cell surface receptor linked signal transduction	signal transduction	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	positive regulation vascular endothelial growth factor production	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	complement activation	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	complement activation	protein metabolism	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	negative regulation of dopamine secretion	transport	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	positive regulation of chemotaxis	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	"complement activation, alternative pathway"	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	"complement activation, alternative pathway"	protein metabolism	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	cell surface receptor linked signal transduction	signal transduction	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	activation of MAPK activity	signal transduction	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	activation of MAPK activity	protein metabolism	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	inflammatory response	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	cellular calcium ion homeostasis	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	response to stress	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	cellular calcium ion homeostasis	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	glucose homeostasis	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	innate immune response	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	inflammatory response	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	activation of MAPK activity	signal transduction	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	activation of MAPK activity	protein metabolism	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	induction of apoptosis	death	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	negative regulation of endopeptidase activity	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	induction of apoptosis	death	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	negative regulation of endopeptidase activity	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	negative regulation of norepinephrine secretion	transport	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	cytolysis	death	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	in utero embryonic development	developmental processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	negative regulation of dopamine secretion	transport	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c14681	leukocyte migration during inflammatory response	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	positive regulation vascular endothelial growth factor production	other biological processes	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	G-protein coupled receptor protein signaling pathway	signal transduction	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c29809	response to stress	stress response	P	Complement C5 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c9778	negative regulation of endopeptidase activity	other biological processes	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes2_c2057	keratinocyte differentiation	other biological processes	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes2_c2057	peptide cross-linking	protein metabolism	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes_c9778	negative regulation of peptidase activity	other biological processes	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes_c9778	cell adhesion	cell adhesion	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes2_c2057	cell adhesion	cell adhesion	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes2_c2057	cell-cell adhesion	cell adhesion	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes_c9778	keratinocyte differentiation	other biological processes	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes2_c2057	negative regulation of peptidase activity	other biological processes	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes2_c2057	negative regulation of endopeptidase activity	other biological processes	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes_c9778	cell-cell adhesion	cell adhesion	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes_c9778	peptide cross-linking	protein metabolism	P	Cystatin-A (Cystatin-AS) (Stefin-A)
ruditapes_c24411	adult locomotory behavior	other biological processes	P	Cystatin-B (Cystatin-beta) (Liver thiol proteinase inhibitor) (Stefin-B)
ruditapes_c24411	negative regulation of peptidase activity	other biological processes	P	Cystatin-B (Cystatin-beta) (Liver thiol proteinase inhibitor) (Stefin-B)
ruditapes_c24411	negative regulation of endopeptidase activity	other biological processes	P	Cystatin-B (Cystatin-beta) (Liver thiol proteinase inhibitor) (Stefin-B)
ruditapes_c24411	regulation of apoptosis	death	P	Cystatin-B (Cystatin-beta) (Liver thiol proteinase inhibitor) (Stefin-B)
ruditapes_lrc33471	negative regulation of peptidase activity	other biological processes	P	Bromelain inhibitor (BI) (Bromein) [Cleaved into: Bromelain inhibitor 1 chain B (BI-I B) (Bromelain inhibitor VII light chain) (BI-VII L); Bromelain inhibitor 1 chain A (BI-I A) (Bromelain inhibitor VII heavy chain) (BI-VII H); Bromelain inhibitor 3 chain B (BI-III B); Bromelain inhibitor 3 chain A (BI-III A); Bromelain inhibitor 2 chain B (BI-II B) (Bromelain inhibitor VI light chain) (BI-VI L); Bromelain inhibitor 2 chain A (BI-II A) (Bromelain inhibitor VI heavy chain) (BI-VI H)]
ruditapes_c22181	"regulation of transcription, DNA-dependent"	RNA metabolism	P	p135Gag-Myb-Ets-transforming protein [Cleaved into: Transforming protein v-Myb; Transforming protein v-Ets] (Fragment)
ruditapes_c14115	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Myc proto-oncogene protein (c-Myc)
ruditapes_c14115	positive regulation of cell proliferation	cell cycle and proliferation	P	Myc proto-oncogene protein (c-Myc)
ruditapes_c14115	response to drug	other biological processes	P	Myc proto-oncogene protein (c-Myc)
ruditapes_c14115	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Myc proto-oncogene protein (c-Myc)
ruditapes_c14115	epidermis morphogenesis	developmental processes	P	Myc proto-oncogene protein (c-Myc)
ruditapes_c14115	"transcription, DNA-dependent"	RNA metabolism	P	Myc proto-oncogene protein (c-Myc)
ruditapes_c14115	regulation of telomere maintenance	DNA metabolism	P	Myc proto-oncogene protein (c-Myc)
ruditapes_c14115	regulation of telomere maintenance	cell organization and biogenesis	P	Myc proto-oncogene protein (c-Myc)
ruditapes_c20613	small GTPase mediated signal transduction	signal transduction	P	Ras-like GTP-binding protein RHO
ruditapes_c9632	small GTPase mediated signal transduction	signal transduction	P	Ras-like GTP-binding protein RHO
ruditapes_lrc27132	immune response	other biological processes	P	Ig heavy chain V-III region BUR
ruditapes_lrc27132	innate immune response	stress response	P	Ig heavy chain V-III region BUR
ruditapes_lrc27132	"complement activation, classical pathway"	stress response	P	Ig heavy chain V-III region BUR
ruditapes_lrc27132	"complement activation, classical pathway"	protein metabolism	P	Ig heavy chain V-III region BUR
ruditapes_lrc27132	regulation of immune response	other biological processes	P	Ig heavy chain V-III region BUR
ruditapes_lrc27132	complement activation	stress response	P	Ig heavy chain V-III region BUR
ruditapes_lrc27132	complement activation	protein metabolism	P	Ig heavy chain V-III region BUR
ruditapes2_c1888	immune response	other biological processes	P	Ig heavy chain V-III region WAS
ruditapes2_c1888	innate immune response	stress response	P	Ig heavy chain V-III region WAS
ruditapes2_c1888	"complement activation, classical pathway"	stress response	P	Ig heavy chain V-III region WAS
ruditapes2_c1888	"complement activation, classical pathway"	protein metabolism	P	Ig heavy chain V-III region WAS
ruditapes2_c1888	complement activation	stress response	P	Ig heavy chain V-III region WAS
ruditapes2_c1888	complement activation	protein metabolism	P	Ig heavy chain V-III region WAS
ruditapes2_c1888	regulation of immune response	other biological processes	P	Ig heavy chain V-III region WAS
ruditapes_lrc35654	nucleosome assembly	cell organization and biogenesis	P	Histone H3.3C (Embryonic)
ruditapes2_lrc4546	nucleosome assembly	cell organization and biogenesis	P	Histone H3.3C (Embryonic)
ruditapes_lrc36846	translation	protein metabolism	P	40S ribosomal protein S3-A (S1A)
ruditapes_lrc32643	translation	protein metabolism	P	40S ribosomal protein S3-A (S1A)
ruditapes_lrc36041	translation	protein metabolism	P	60S ribosomal protein L4-B (L1B)
ruditapes_lrc34243	translation	protein metabolism	P	60S ribosomal protein L4-B (L1B)
ruditapes2_c5501	translational elongation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes_lrc21490	translation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes2_c5684	translation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes_lrc35655	translational elongation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes2_c5433	translational elongation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes2_c4099	translational elongation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes_s40414	translational elongation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes2_c5433	translation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes2_c5501	translation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes2_c4099	translation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes2_c5684	translational elongation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes_lrc21490	translational elongation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes_s40414	translation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes_lrc35655	translation	protein metabolism	P	60S acidic ribosomal protein P1 (eL12'/ eL12'-P)
ruditapes_s40190	translation	protein metabolism	P	60S ribosomal protein L35a (L32)
ruditapes2_c209	blood vessel development	developmental processes	P	Collagen alpha-2(I) chain (Alpha-2 type I collagen)
ruditapes2_c209	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-2(I) chain (Alpha-2 type I collagen)
ruditapes2_c209	protein heterotrimerization	cell organization and biogenesis	P	Collagen alpha-2(I) chain (Alpha-2 type I collagen)
ruditapes2_c209	skin morphogenesis	developmental processes	P	Collagen alpha-2(I) chain (Alpha-2 type I collagen)
ruditapes2_c209	regulation of blood pressure	other biological processes	P	Collagen alpha-2(I) chain (Alpha-2 type I collagen)
ruditapes2_c209	Rho protein signal transduction	signal transduction	P	Collagen alpha-2(I) chain (Alpha-2 type I collagen)
ruditapes2_c209	skeletal system development	developmental processes	P	Collagen alpha-2(I) chain (Alpha-2 type I collagen)
ruditapes2_c209	transforming growth factor beta receptor signaling pathway	signal transduction	P	Collagen alpha-2(I) chain (Alpha-2 type I collagen)
ruditapes2_c932	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-1 chain (Fragment)
ruditapes2_c932	microtubule-based process	other biological processes	P	Tubulin alpha-1 chain (Fragment)
ruditapes2_c4281	microtubule-based process	other biological processes	P	Tubulin alpha-1 chain (Fragment)
ruditapes2_lrc3596	microtubule-based movement	other biological processes	P	Tubulin alpha-1 chain (Fragment)
ruditapes2_c4281	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-1 chain (Fragment)
ruditapes2_lrc3596	GTP catabolic process	other metabolic processes	P	Tubulin alpha-1 chain (Fragment)
ruditapes2_lrc3596	microtubule-based process	other biological processes	P	Tubulin alpha-1 chain (Fragment)
ruditapes2_c932	microtubule-based movement	other biological processes	P	Tubulin alpha-1 chain (Fragment)
ruditapes2_c4281	GTP catabolic process	other metabolic processes	P	Tubulin alpha-1 chain (Fragment)
ruditapes2_c4281	microtubule-based movement	other biological processes	P	Tubulin alpha-1 chain (Fragment)
ruditapes2_c932	GTP catabolic process	other metabolic processes	P	Tubulin alpha-1 chain (Fragment)
ruditapes2_lrc3596	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-1 chain (Fragment)
ruditapes_c5648	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes_lrc38746	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes_lrc32775	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc5654	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc3794	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes_c2884	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc3497	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc21114	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc38520	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes2_c1392	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes2_c1392	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc21114	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc3497	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_c2884	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc21114	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_c4628	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc3794	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes2_c4532	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_c5648	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes2_c1392	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes2_c4532	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc33080	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_c4628	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_c2884	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes2_c4532	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc3794	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc5654	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc38746	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc33080	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc3497	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc38746	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_c4628	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc33808	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc38746	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc32775	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc5654	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc5654	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc3794	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc33080	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes2_lrc3497	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes_lrc33080	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_c4628	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes_lrc33808	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc33808	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc21114	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes_c5648	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc32775	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc38520	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc33808	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes_c5648	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc38520	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes2_c4532	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes_c2884	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes2_c1392	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes_lrc32775	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc38520	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_c5538	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c2137	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc38644	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc35676	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc28305	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3505	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc27733	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc38644	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c34989	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc22513	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc28305	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc35676	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc27733	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_s39301	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_c1543	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc22513	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_c1543	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_s40431	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc36436	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc4170	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc38869	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc38869	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c6036	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc27733	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc4170	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c2137	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3972	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c2137	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c5538	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc15708	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc38869	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c6036	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_s40431	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_s40431	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc4170	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc36436	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c6036	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc36436	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3505	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc28305	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_s39301	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc15708	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c34989	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_c1543	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c34989	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3972	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc35676	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_s39301	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc15708	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c5538	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc38644	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3505	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3972	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc22513	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c6008	pharyngeal pumping	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes_c6008	muscle contraction	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3674	muscle thick filament assembly	developmental processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3674	muscle thick filament assembly	cell organization and biogenesis	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3962	muscle contraction	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3674	oviposition	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c4055	oviposition	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3962	oviposition	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes_c6008	inositol lipid-mediated signaling	signal transduction	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes_c6008	locomotion	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3674	muscle contraction	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3674	axonal fasciculation	developmental processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3674	axonal fasciculation	cell organization and biogenesis	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3674	pharyngeal pumping	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3962	locomotion	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3962	inositol lipid-mediated signaling	signal transduction	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c4055	inositol lipid-mediated signaling	signal transduction	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3962	muscle thick filament assembly	cell organization and biogenesis	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes_c6008	axonal fasciculation	developmental processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes_c6008	axonal fasciculation	cell organization and biogenesis	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c4055	locomotion	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes_c6008	muscle thick filament assembly	developmental processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes_c6008	muscle thick filament assembly	cell organization and biogenesis	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c4055	axonal fasciculation	developmental processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c4055	axonal fasciculation	cell organization and biogenesis	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes_c6008	oviposition	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c4055	muscle thick filament assembly	developmental processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c4055	muscle thick filament assembly	cell organization and biogenesis	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3962	muscle thick filament assembly	developmental processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3674	body morphogenesis	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes_c6008	body morphogenesis	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3962	axonal fasciculation	developmental processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3962	axonal fasciculation	cell organization and biogenesis	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3674	inositol lipid-mediated signaling	signal transduction	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3674	locomotion	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c4055	body morphogenesis	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3962	pharyngeal pumping	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c4055	muscle contraction	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c3962	body morphogenesis	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c4055	pharyngeal pumping	other biological processes	P	Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
ruditapes2_c982	muscle contraction	other biological processes	P	"Myosin light chain 1/3, skeletal muscle isoform (MLC1/MLC3) (MLC1F/MLC3F) (Myosin light chain alkali 1/2) (Myosin light chain A1/A2)"
ruditapes2_c2722	actin filament severing	other biological processes	P	Villin-1
ruditapes2_c2722	cytoskeleton organization	cell organization and biogenesis	P	Villin-1
ruditapes2_c2722	positive regulation of cell migration	other biological processes	P	Villin-1
ruditapes2_c2722	positive regulation of epithelial cell migration	other biological processes	P	Villin-1
ruditapes2_c2722	negative regulation of caspase activity	death	P	Villin-1
ruditapes2_c2722	response to bacterium	other biological processes	P	Villin-1
ruditapes2_c2722	cytoplasmic actin-based contraction involved in cell motility	transport	P	Villin-1
ruditapes2_c2722	regulation of actin nucleation	cell organization and biogenesis	P	Villin-1
ruditapes2_c2722	positive regulation of actin filament bundle formation	cell organization and biogenesis	P	Villin-1
ruditapes2_c2722	epidermal growth factor receptor signaling pathway	signal transduction	P	Villin-1
ruditapes2_c2722	regulation of cell shape	cell organization and biogenesis	P	Villin-1
ruditapes2_c2722	actin filament depolymerization	cell organization and biogenesis	P	Villin-1
ruditapes2_c2722	actin filament polymerization	cell organization and biogenesis	P	Villin-1
ruditapes2_c2722	actin filament capping	protein metabolism	P	Villin-1
ruditapes2_c2722	actin filament capping	cell organization and biogenesis	P	Villin-1
ruditapes2_c2578	transport	transport	P	Alpha-S2-casein-like A (Casein alpha S2-like A) (Gamma-casein)
ruditapes_c8558	endocytosis	transport	P	Hepatic lectin
ruditapes_c8558	endocytosis	cell organization and biogenesis	P	Hepatic lectin
ruditapes2_c3489	endocytosis	transport	P	Hepatic lectin
ruditapes2_c3489	endocytosis	cell organization and biogenesis	P	Hepatic lectin
ruditapes_c3420	endocytosis	transport	P	Hepatic lectin
ruditapes_c3420	endocytosis	cell organization and biogenesis	P	Hepatic lectin
ruditapes_lrc34823	endocytosis	transport	P	Hepatic lectin
ruditapes_lrc34823	endocytosis	cell organization and biogenesis	P	Hepatic lectin
ruditapes_c14525	endocytosis	transport	P	Hepatic lectin
ruditapes_c14525	endocytosis	cell organization and biogenesis	P	Hepatic lectin
ruditapes_c10308	endocytosis	transport	P	Hepatic lectin
ruditapes_c10308	endocytosis	cell organization and biogenesis	P	Hepatic lectin
ruditapes2_c5678	innate immune response	stress response	P	Complement C1q subcomponent subunit B
ruditapes_c37586	response to organic substance	other biological processes	P	Complement C1q subcomponent subunit B
ruditapes2_c5678	response to organic substance	other biological processes	P	Complement C1q subcomponent subunit B
ruditapes2_c5678	"complement activation, classical pathway"	stress response	P	Complement C1q subcomponent subunit B
ruditapes2_c5678	"complement activation, classical pathway"	protein metabolism	P	Complement C1q subcomponent subunit B
ruditapes_c37586	brain development	developmental processes	P	Complement C1q subcomponent subunit B
ruditapes_c37586	complement activation	stress response	P	Complement C1q subcomponent subunit B
ruditapes_c37586	complement activation	protein metabolism	P	Complement C1q subcomponent subunit B
ruditapes2_c5678	response to glucocorticoid stimulus	other biological processes	P	Complement C1q subcomponent subunit B
ruditapes2_c5678	brain development	developmental processes	P	Complement C1q subcomponent subunit B
ruditapes_c37586	response to glucocorticoid stimulus	other biological processes	P	Complement C1q subcomponent subunit B
ruditapes2_c5678	aging	other biological processes	P	Complement C1q subcomponent subunit B
ruditapes_c37586	aging	other biological processes	P	Complement C1q subcomponent subunit B
ruditapes2_c5678	complement activation	stress response	P	Complement C1q subcomponent subunit B
ruditapes2_c5678	complement activation	protein metabolism	P	Complement C1q subcomponent subunit B
ruditapes_c37586	"complement activation, classical pathway"	stress response	P	Complement C1q subcomponent subunit B
ruditapes_c37586	"complement activation, classical pathway"	protein metabolism	P	Complement C1q subcomponent subunit B
ruditapes_c37586	innate immune response	stress response	P	Complement C1q subcomponent subunit B
ruditapes_c31469	aerobic respiration	other metabolic processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	negative regulation of lipid storage	other biological processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	glucose homeostasis	other biological processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	positive regulation of glucose metabolic process	other metabolic processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	negative regulation of gluconeogenesis	other metabolic processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	positive regulation of gene expression	other metabolic processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	energy reserve metabolic process	other metabolic processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	locomotor rhythm	other biological processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	mitochondrion morphogenesis	cell organization and biogenesis	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	insulin receptor signaling pathway	signal transduction	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	transport	transport	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	behavior	other biological processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	positive regulation of lipid metabolic process	other metabolic processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	positive regulation of protein kinase B signaling cascade	signal transduction	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	negative regulation of lipid biosynthetic process	other metabolic processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c31469	heat generation	other biological processes	P	Major urinary protein (MUP) (Allergen Rat n I) (Alpha(2)-euglobulin) (Alpha-2u-globulin) (alpha-2u globulin PGCL1) (allergen Rat n 1) [Cleaved into: 15.5 kDa fatty acid-binding protein (15.5 kDa FABP)]
ruditapes_c12477	acute-phase response	stress response	P	Ovotransferrin (Allergen Gal d III) (Conalbumin) (Serum transferrin) (allergen Gal d 3)
ruditapes_c12477	transport	transport	P	Ovotransferrin (Allergen Gal d III) (Conalbumin) (Serum transferrin) (allergen Gal d 3)
ruditapes_c12477	iron ion transport	transport	P	Ovotransferrin (Allergen Gal d III) (Conalbumin) (Serum transferrin) (allergen Gal d 3)
ruditapes_c12477	response to lipopolysaccharide	other biological processes	P	Ovotransferrin (Allergen Gal d III) (Conalbumin) (Serum transferrin) (allergen Gal d 3)
ruditapes_c12477	iron ion homeostasis	other biological processes	P	Ovotransferrin (Allergen Gal d III) (Conalbumin) (Serum transferrin) (allergen Gal d 3)
ruditapes_c12477	cellular iron ion homeostasis	other biological processes	P	Ovotransferrin (Allergen Gal d III) (Conalbumin) (Serum transferrin) (allergen Gal d 3)
ruditapes_c12477	ion transport	transport	P	Ovotransferrin (Allergen Gal d III) (Conalbumin) (Serum transferrin) (allergen Gal d 3)
ruditapes_c20169	negative regulation of cytolysis	death	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c20169	regulation of cell shape	cell organization and biogenesis	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c20169	response to antibiotic	other biological processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c20169	response to drug	other biological processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c10051	negative regulation of cytolysis	death	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c20169	peptidoglycan-based cell wall biogenesis	other biological processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c10051	cell wall organization	cell organization and biogenesis	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c10051	response to drug	other biological processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c10051	peptidoglycan-based cell wall biogenesis	other biological processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c10051	regulation of cell shape	cell organization and biogenesis	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c20169	metabolic process	other metabolic processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c10051	response to antibiotic	other biological processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c20169	peptidoglycan biosynthetic process	other metabolic processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c20169	cell wall organization	cell organization and biogenesis	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c10051	peptidoglycan biosynthetic process	other metabolic processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c10051	metabolic process	other metabolic processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c9105	GTP catabolic process	other metabolic processes	P	"Elongation factor Tu, mitochondrial (tufM)"
ruditapes_c9105	translational elongation	protein metabolism	P	"Elongation factor Tu, mitochondrial (tufM)"
ruditapes_c9105	mitochondrial translation	cell organization and biogenesis	P	"Elongation factor Tu, mitochondrial (tufM)"
ruditapes_c9105	translation	protein metabolism	P	"Elongation factor Tu, mitochondrial (tufM)"
ruditapes_c9105	mitochondrial translation	protein metabolism	P	"Elongation factor Tu, mitochondrial (tufM)"
ruditapes_c14246	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator protein LysR
ruditapes_c14246	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator protein LysR
ruditapes_c6325	DNA replication	DNA metabolism	P	Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1)
ruditapes_c22188	DNA replication	DNA metabolism	P	Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1)
ruditapes_c12271	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein E6
ruditapes_c12271	activation of Cdc42 GTPase activity	signal transduction	P	Protein E6
ruditapes_c6233	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c12271	"transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c6233	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein E6
ruditapes_c6233	activation of Cdc42 GTPase activity	signal transduction	P	Protein E6
ruditapes_c6233	interspecies interaction between organisms	other biological processes	P	Protein E6
ruditapes_c12271	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c12271	evasion by virus of host immune response	stress response	P	Protein E6
ruditapes_c12271	interspecies interaction between organisms	other biological processes	P	Protein E6
ruditapes_c6233	"transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c6233	evasion by virus of host immune response	stress response	P	Protein E6
ruditapes_c5045	metabolic process	other metabolic processes	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c5045	RNA-dependent DNA replication	DNA metabolism	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c5045	DNA replication	DNA metabolism	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c5045	evasion by virus of host immune response	stress response	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c5045	interspecies interaction between organisms	other biological processes	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_lrc27548	DNA replication	DNA metabolism	P	Helicase/primase complex protein (Probable DNA replication protein BSLF1)
ruditapes_c967	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c967	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c967	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c967	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c967	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c967	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c967	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c967	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c967	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c967	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c17180	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c17180	transport	transport	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c17180	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c17180	ion transport	transport	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c17180	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c17180	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c17180	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c17180	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c17180	viral protein processing	protein metabolism	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c17180	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c9556	transport	transport	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c9556	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c9556	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c9556	viral protein processing	protein metabolism	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c9556	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c9556	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c9556	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c9556	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c9556	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c9556	ion transport	transport	P	Genome polyprotein [Cleaved into: Leader protease (Lpro) (EC 3.4.22.46); Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A) (P52); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B-1 (P3B-1) (Genome-linked protein VPg1); Protein 3B-2 (P3B-2) (Genome-linked protein VPg2); Protein 3B-3 (P3B-3) (Genome-linked protein VPg3); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C) (Protease P20B); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48) (P56A)]
ruditapes_c20634	proteolysis	protein metabolism	P	Structural polyprotein (p130) [Cleaved into: Capsid protein (EC 3.4.21.90) (Coat protein) (C); p62 (E3/E2); E3 protein (Spike glycoprotein E3); E2 envelope glycoprotein (Spike glycoprotein E2); 6K protein; E1 envelope glycoprotein (Spike glycoprotein E1)]
ruditapes_c29754	interspecies interaction between organisms	other biological processes	P	Structural polyprotein (p130) [Cleaved into: Capsid protein (EC 3.4.21.90) (Coat protein) (C); p62 (E3/E2); E3 protein (Spike glycoprotein E3); E2 envelope glycoprotein (Spike glycoprotein E2); 6K protein; E1 envelope glycoprotein (Spike glycoprotein E1)]
ruditapes_c29754	proteolysis	protein metabolism	P	Structural polyprotein (p130) [Cleaved into: Capsid protein (EC 3.4.21.90) (Coat protein) (C); p62 (E3/E2); E3 protein (Spike glycoprotein E3); E2 envelope glycoprotein (Spike glycoprotein E2); 6K protein; E1 envelope glycoprotein (Spike glycoprotein E1)]
ruditapes_c20634	interspecies interaction between organisms	other biological processes	P	Structural polyprotein (p130) [Cleaved into: Capsid protein (EC 3.4.21.90) (Coat protein) (C); p62 (E3/E2); E3 protein (Spike glycoprotein E3); E2 envelope glycoprotein (Spike glycoprotein E2); 6K protein; E1 envelope glycoprotein (Spike glycoprotein E1)]
ruditapes_c9891	DNA recombination	DNA metabolism	P	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase (IN)] (Fragment)
ruditapes_c9891	DNA integration	DNA metabolism	P	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase (IN)] (Fragment)
ruditapes_c9891	metabolic process	other metabolic processes	P	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase (IN)] (Fragment)
ruditapes_c18113	metabolic process	other metabolic processes	P	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase (IN)]
ruditapes_c18113	RNA-dependent DNA replication	DNA metabolism	P	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase (IN)]
ruditapes_c18113	DNA integration	DNA metabolism	P	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase (IN)]
ruditapes_c18113	DNA recombination	DNA metabolism	P	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase (IN)]
ruditapes2_lrc7120	viral genome packaging	cell organization and biogenesis	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	entry of virus into host cell	other biological processes	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	virion assembly	cell organization and biogenesis	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	viral genome maturation	cell organization and biogenesis	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	receptor mediated endocytosis of virus by host	transport	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	"transcription, DNA-dependent"	RNA metabolism	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	viral infectious cycle	other biological processes	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	release of virus from host	other biological processes	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	uncoating of virus	other biological processes	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	viral transcription	RNA metabolism	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	receptor mediated endocytosis of virus by host	cell organization and biogenesis	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	viral envelope fusion with host membrane	cell organization and biogenesis	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	viral genome transport in host cell	transport	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	"viral assembly, maturation, egress, and release"	other biological processes	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes2_lrc7120	viral reproduction	other biological processes	P	Polymerase acidic protein (RNA-directed RNA polymerase subunit P2)
ruditapes_c22297	interspecies interaction between organisms	other biological processes	P	Hemagglutinin [Cleaved into: Hemagglutinin HA1 chain; Hemagglutinin HA2 chain]
ruditapes_c22297	viral envelope fusion with host membrane	cell organization and biogenesis	P	Hemagglutinin [Cleaved into: Hemagglutinin HA1 chain; Hemagglutinin HA2 chain]
ruditapes_s39933	interspecies interaction between organisms	other biological processes	P	Hemagglutinin [Cleaved into: Hemagglutinin HA1 chain; Hemagglutinin HA2 chain]
ruditapes_s39933	viral envelope fusion with host membrane	cell organization and biogenesis	P	Hemagglutinin [Cleaved into: Hemagglutinin HA1 chain; Hemagglutinin HA2 chain]
ruditapes2_c140	metabolic process	other metabolic processes	P	Neuraminidase (EC 3.2.1.18)
ruditapes2_c140	carbohydrate metabolic process	other metabolic processes	P	Neuraminidase (EC 3.2.1.18)
ruditapes_c15897	interspecies interaction between organisms	other biological processes	P	Outer capsid protein sigma-3 (Sigma3)
ruditapes_c15897	evasion by virus of host immune response	stress response	P	Outer capsid protein sigma-3 (Sigma3)
ruditapes_c15897	viral infectious cycle	other biological processes	P	Outer capsid protein sigma-3 (Sigma3)
ruditapes_c15897	"transcription, DNA-dependent"	RNA metabolism	P	Outer capsid protein sigma-3 (Sigma3)
ruditapes_c15897	regulation of translation	protein metabolism	P	Outer capsid protein sigma-3 (Sigma3)
ruditapes_c15897	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Outer capsid protein sigma-3 (Sigma3)
ruditapes_c15963	regulation of translation	protein metabolism	P	Non-structural protein 3 (NSP3) (NCVP4) (Non-structural RNA-binding protein 34) (NS34)
ruditapes_c15963	interspecies interaction between organisms	other biological processes	P	Non-structural protein 3 (NSP3) (NCVP4) (Non-structural RNA-binding protein 34) (NS34)
ruditapes_c8106	RNA-dependent DNA replication	DNA metabolism	P	Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)]
ruditapes_c8106	proteolysis	protein metabolism	P	Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)]
ruditapes2_c108	DNA replication	DNA metabolism	P	A protein (GPA)
ruditapes_c11465	DNA replication	DNA metabolism	P	Protein cop
ruditapes_s33108	RNA splicing	RNA metabolism	P	Cytochrome B pre-mRNA-processing protein 2
ruditapes_s33108	Group I intron splicing	RNA metabolism	P	Cytochrome B pre-mRNA-processing protein 2
ruditapes_s33108	mRNA processing	RNA metabolism	P	Cytochrome B pre-mRNA-processing protein 2
ruditapes_c23277	mRNA processing	RNA metabolism	P	"Intron-encoded RNA maturase bI4 (RNA maturase SCbI4) [Cleaved into: Truncated, nonfunctional cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]"
ruditapes_c23277	Group I intron splicing	RNA metabolism	P	"Intron-encoded RNA maturase bI4 (RNA maturase SCbI4) [Cleaved into: Truncated, nonfunctional cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]"
ruditapes_c23277	respiratory electron transport chain	other metabolic processes	P	"Intron-encoded RNA maturase bI4 (RNA maturase SCbI4) [Cleaved into: Truncated, nonfunctional cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]"
ruditapes_c23277	RNA splicing	RNA metabolism	P	"Intron-encoded RNA maturase bI4 (RNA maturase SCbI4) [Cleaved into: Truncated, nonfunctional cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]"
ruditapes_c23277	intron homing	DNA metabolism	P	"Intron-encoded RNA maturase bI4 (RNA maturase SCbI4) [Cleaved into: Truncated, nonfunctional cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]"
ruditapes_c9868	"transposition, DNA-mediated"	DNA metabolism	P	Transposable element Tc1 transposase
ruditapes_c9868	DNA integration	DNA metabolism	P	Transposable element Tc1 transposase
ruditapes_c9868	DNA recombination	DNA metabolism	P	Transposable element Tc1 transposase
ruditapes2_lrc4476	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc36360	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc34291	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5382	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc39285	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33834	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc36360	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c450	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5060	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc34291	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33834	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc36360	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c2915	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c2915	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc36360	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32079	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33888	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32079	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38251	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c2915	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32079	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32079	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5382	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33834	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33834	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3727	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c450	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4476	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4476	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38251	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38251	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38251	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5060	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4476	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4476	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c450	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38610	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38610	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc36360	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc36360	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33834	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38251	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc39285	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5060	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38610	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38610	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38251	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33888	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5382	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32079	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc39285	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38610	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc39285	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38610	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c2915	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c2915	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc39285	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc39285	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc34291	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc34291	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc34291	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32079	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32079	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c2915	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4476	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5382	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33888	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33888	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4476	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3727	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc39285	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c450	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5382	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33888	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33888	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5060	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc34291	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38610	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38610	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc39285	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4476	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc36360	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38251	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c450	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33834	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33834	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5060	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5060	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc39285	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33888	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5382	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5382	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5382	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c2915	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5060	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33888	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc36360	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3727	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5060	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5060	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc36360	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3727	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc34291	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c2915	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c2915	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32079	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3727	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc36360	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32079	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38610	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4476	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38251	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5382	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33834	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5060	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc34291	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc34291	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32079	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33834	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33888	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3727	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc5382	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4476	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38251	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3727	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33888	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc39285	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33834	positive regulation of fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c450	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c450	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38610	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c2915	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3727	Factor XII activation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3727	Factor XII activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc34291	zymogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc38251	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c450	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c450	plasminogen activation	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c450	"blood coagulation, intrinsic pathway"	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3727	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c401	proteolysis	protein metabolism	P	Carboxypeptidase B (EC 3.4.17.2)
ruditapes_c1317	proteolysis	protein metabolism	P	Carboxypeptidase B (EC 3.4.17.2)
ruditapes_c2	proteolysis	protein metabolism	P	Carboxypeptidase B (EC 3.4.17.2)
ruditapes_c4076	proteolysis	protein metabolism	P	Carboxypeptidase B (EC 3.4.17.2)
ruditapes2_lrc5303	proteolysis	protein metabolism	P	Carboxypeptidase B (EC 3.4.17.2)
ruditapes_c6982	glucose metabolic process	other metabolic processes	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	platelet degranulation	transport	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	platelet activation	stress response	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	carbohydrate metabolic process	other metabolic processes	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	blood coagulation	stress response	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	protein homotetramerization	cell organization and biogenesis	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	regulation of cell shape	cell organization and biogenesis	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	ATP biosynthetic process	other metabolic processes	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	"fructose 1,6-bisphosphate metabolic process"	other metabolic processes	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	fructose metabolic process	other metabolic processes	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	glycolysis	other metabolic processes	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	striated muscle contraction	other biological processes	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	actin filament organization	cell organization and biogenesis	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	gluconeogenesis	other metabolic processes	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c6982	muscle maintenance	other biological processes	P	Fructose-bisphosphate aldolase A (EC 4.1.2.13) (Lung cancer antigen NY-LU-1) (Muscle-type aldolase)
ruditapes_c25602	positive regulation of cholesterol storage	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	very-low-density lipoprotein particle assembly	cell organization and biogenesis	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	lipid transport	transport	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	transport	transport	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	response to carbohydrate stimulus	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	cholesterol transport	transport	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	sperm motility	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	spermatogenesis	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	blood coagulation	stress response	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	fertilization	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	response to lipopolysaccharide	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	receptor-mediated endocytosis	transport	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	receptor-mediated endocytosis	cell organization and biogenesis	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	cholesterol metabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	low-density lipoprotein particle clearance	cell organization and biogenesis	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	triglyceride catabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	response to selenium ion	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	cholesterol homeostasis	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	lipoprotein biosynthetic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	positive regulation of lipid storage	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	in utero embryonic development	developmental processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	post-embryonic development	developmental processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	lipoprotein catabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	lipid metabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	nervous system development	developmental processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	positive regulation of foam cell differentiation	developmental processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	response to virus	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	response to organic substance	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	steroid metabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	lipoprotein transport	transport	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	low-density lipoprotein particle remodeling	cell organization and biogenesis	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	lipoprotein metabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	regulation of cholesterol biosynthetic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	artery morphogenesis	developmental processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	lipid catabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	triglyceride mobilization	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c25602	leukocyte migration	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_lrc30836	white fat cell differentiation	other biological processes	P	"Fatty acid-binding protein, adipocyte (3T3-L1 lipid-binding protein) (Adipocyte lipid-binding protein) (ALBP) (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4) (Myelin P2 protein homolog) (P15) (P2 adipocyte protein) (Protein 422)"
ruditapes_lrc30836	transport	transport	P	"Fatty acid-binding protein, adipocyte (3T3-L1 lipid-binding protein) (Adipocyte lipid-binding protein) (ALBP) (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4) (Myelin P2 protein homolog) (P15) (P2 adipocyte protein) (Protein 422)"
ruditapes_lrc30836	cytokine production	other biological processes	P	"Fatty acid-binding protein, adipocyte (3T3-L1 lipid-binding protein) (Adipocyte lipid-binding protein) (ALBP) (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4) (Myelin P2 protein homolog) (P15) (P2 adipocyte protein) (Protein 422)"
ruditapes_lrc30836	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	"Fatty acid-binding protein, adipocyte (3T3-L1 lipid-binding protein) (Adipocyte lipid-binding protein) (ALBP) (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4) (Myelin P2 protein homolog) (P15) (P2 adipocyte protein) (Protein 422)"
ruditapes_lrc30836	positive regulation of inflammatory response	stress response	P	"Fatty acid-binding protein, adipocyte (3T3-L1 lipid-binding protein) (Adipocyte lipid-binding protein) (ALBP) (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4) (Myelin P2 protein homolog) (P15) (P2 adipocyte protein) (Protein 422)"
ruditapes_lrc30836	cholesterol homeostasis	other biological processes	P	"Fatty acid-binding protein, adipocyte (3T3-L1 lipid-binding protein) (Adipocyte lipid-binding protein) (ALBP) (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4) (Myelin P2 protein homolog) (P15) (P2 adipocyte protein) (Protein 422)"
ruditapes_lrc30836	negative regulation of protein kinase activity	other metabolic processes	P	"Fatty acid-binding protein, adipocyte (3T3-L1 lipid-binding protein) (Adipocyte lipid-binding protein) (ALBP) (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4) (Myelin P2 protein homolog) (P15) (P2 adipocyte protein) (Protein 422)"
ruditapes_lrc30836	brown fat cell differentiation	other biological processes	P	"Fatty acid-binding protein, adipocyte (3T3-L1 lipid-binding protein) (Adipocyte lipid-binding protein) (ALBP) (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4) (Myelin P2 protein homolog) (P15) (P2 adipocyte protein) (Protein 422)"
ruditapes_c25234	DNA integration	DNA metabolism	P	Copia protein (Gag-int-pol protein) [Cleaved into: Copia VLP protein; Copia protease (EC 3.4.23.-)]
ruditapes_c25234	proteolysis	protein metabolism	P	Copia protein (Gag-int-pol protein) [Cleaved into: Copia VLP protein; Copia protease (EC 3.4.23.-)]
ruditapes_lrc15846	negative thymic T cell selection	developmental processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	negative regulation of protein kinase activity	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of gamma-delta T cell differentiation	developmental processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	release of sequestered calcium ion into cytosol	transport	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	regulation of S phase	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	T cell receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of T cell proliferation	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	negative regulation of T cell mediated cytotoxicity	death	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	regulation of B cell differentiation	developmental processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of isotype switching to IgG isotypes	developmental processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of isotype switching to IgG isotypes	DNA metabolism	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	heterotypic cell-cell adhesion	cell adhesion	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive thymic T cell selection	developmental processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	regulation of humoral immune response mediated by circulating immunoglobulin	other biological processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	activation of MAPK activity	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	activation of MAPK activity	protein metabolism	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of T cell mediated immunity	other biological processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	negative regulation of cytokine-mediated signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of humoral immune response mediated by circulating immunoglobulin	other biological processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	defense response to virus	stress response	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	B cell proliferation	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	immunoglobulin biosynthetic process	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	B cell differentiation	developmental processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	T cell proliferation	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	leukocyte adhesion	cell adhesion	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	negative regulation of protein amino acid autophosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	B cell receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	negative regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of B cell proliferation	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of MAPKKK cascade	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of T cell differentiation	developmental processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	T cell differentiation	developmental processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	regulation of apoptosis	death	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	response to gamma radiation	other biological processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of antigen receptor-mediated signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	regulation of cell cycle	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of apoptosis	death	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	regulation of B cell receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of alpha-beta T cell proliferation	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_lrc15846	positive regulation of T cell mediated cytotoxicity	death	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c8379	lipoprotein biosynthetic process	other metabolic processes	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	lipoprotein metabolic process	other metabolic processes	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	lipid metabolic process	other metabolic processes	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	phosphatidylcholine biosynthetic process	other metabolic processes	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	cholesterol esterification	other metabolic processes	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	cholesterol homeostasis	other biological processes	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	response to copper ion	other biological processes	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	very-low-density lipoprotein particle remodeling	cell organization and biogenesis	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	reverse cholesterol transport	transport	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	high-density lipoprotein particle remodeling	cell organization and biogenesis	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	response to glucocorticoid stimulus	other biological processes	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	cholesterol metabolic process	other metabolic processes	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	phospholipid metabolic process	other metabolic processes	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	cholesterol transport	transport	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c8379	steroid metabolic process	other metabolic processes	P	Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase)
ruditapes_c30777	"complement activation, classical pathway"	stress response	P	Ig lambda chain V region 4A
ruditapes_c30777	"complement activation, classical pathway"	protein metabolism	P	Ig lambda chain V region 4A
ruditapes_c30777	complement activation	stress response	P	Ig lambda chain V region 4A
ruditapes_c30777	complement activation	protein metabolism	P	Ig lambda chain V region 4A
ruditapes_c30777	regulation of immune response	other biological processes	P	Ig lambda chain V region 4A
ruditapes_c30777	immune response	other biological processes	P	Ig lambda chain V region 4A
ruditapes_c30777	innate immune response	stress response	P	Ig lambda chain V region 4A
ruditapes_c10300	protein homooligomerization	cell organization and biogenesis	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c10300	platelet activation	stress response	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c10300	response to stress	stress response	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c10300	response to wounding	stress response	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c10300	placenta development	developmental processes	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c10300	cell-substrate adhesion	cell adhesion	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c10300	liver development	developmental processes	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c10300	platelet degranulation	transport	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c10300	hemostasis	other biological processes	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c10300	cell adhesion	cell adhesion	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c10300	"blood coagulation, intrinsic pathway"	stress response	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c10300	blood coagulation	stress response	P	von Willebrand factor (vWF) [Cleaved into: von Willebrand antigen 2 (von Willebrand antigen II)]
ruditapes_c11947	proteolysis	protein metabolism	P	Retrovirus-related Pol polyprotein from transposon 17.6 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c11947	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 17.6 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c11947	DNA integration	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 17.6 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c21051	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Regulatory protein GAL4
ruditapes_c21051	galactose metabolic process	other metabolic processes	P	Regulatory protein GAL4
ruditapes_c21051	positive regulation of transcription from RNA polymerase II promoter by galactose	RNA metabolism	P	Regulatory protein GAL4
ruditapes_c21051	"transcription, DNA-dependent"	RNA metabolism	P	Regulatory protein GAL4
ruditapes_c21051	carbohydrate metabolic process	other metabolic processes	P	Regulatory protein GAL4
ruditapes_c24660	DNA repair	stress response	P	"DNA-3-methyladenine glycosylase 2 (EC 3.2.2.21) (3-methyladenine-DNA glycosylase II, inducible) (TAG II) (DNA-3-methyladenine glycosidase II) (DNA-3-methyladenine glycosylase II)"
ruditapes_c24660	DNA repair	DNA metabolism	P	"DNA-3-methyladenine glycosylase 2 (EC 3.2.2.21) (3-methyladenine-DNA glycosylase II, inducible) (TAG II) (DNA-3-methyladenine glycosidase II) (DNA-3-methyladenine glycosylase II)"
ruditapes_c24660	response to DNA damage stimulus	stress response	P	"DNA-3-methyladenine glycosylase 2 (EC 3.2.2.21) (3-methyladenine-DNA glycosylase II, inducible) (TAG II) (DNA-3-methyladenine glycosidase II) (DNA-3-methyladenine glycosylase II)"
ruditapes_c24660	DNA dealkylation	stress response	P	"DNA-3-methyladenine glycosylase 2 (EC 3.2.2.21) (3-methyladenine-DNA glycosylase II, inducible) (TAG II) (DNA-3-methyladenine glycosidase II) (DNA-3-methyladenine glycosylase II)"
ruditapes_c24660	DNA dealkylation	DNA metabolism	P	"DNA-3-methyladenine glycosylase 2 (EC 3.2.2.21) (3-methyladenine-DNA glycosylase II, inducible) (TAG II) (DNA-3-methyladenine glycosidase II) (DNA-3-methyladenine glycosylase II)"
ruditapes_c24660	base-excision repair	stress response	P	"DNA-3-methyladenine glycosylase 2 (EC 3.2.2.21) (3-methyladenine-DNA glycosylase II, inducible) (TAG II) (DNA-3-methyladenine glycosidase II) (DNA-3-methyladenine glycosylase II)"
ruditapes_c24660	base-excision repair	DNA metabolism	P	"DNA-3-methyladenine glycosylase 2 (EC 3.2.2.21) (3-methyladenine-DNA glycosylase II, inducible) (TAG II) (DNA-3-methyladenine glycosidase II) (DNA-3-methyladenine glycosylase II)"
ruditapes_c10570	galactose metabolic process	other metabolic processes	P	Bifunctional protein GAL10 [Includes: UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)]
ruditapes_c10570	cellular metabolic process	other metabolic processes	P	Bifunctional protein GAL10 [Includes: UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)]
ruditapes_c10570	carbohydrate metabolic process	other metabolic processes	P	Bifunctional protein GAL10 [Includes: UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)]
ruditapes_c10570	metabolic process	other metabolic processes	P	Bifunctional protein GAL10 [Includes: UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)]
ruditapes_c10570	galactose catabolic process via UDP-galactose	other metabolic processes	P	Bifunctional protein GAL10 [Includes: UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)]
ruditapes_c35475	biological_process	other biological processes	P	"Myosin-8 (Myosin heavy chain 8) (Myosin heavy chain, skeletal muscle, perinatal) (MyHC-perinatal) (Fragment)"
ruditapes_lrc32451	biological_process	other biological processes	P	"Myosin-8 (Myosin heavy chain 8) (Myosin heavy chain, skeletal muscle, perinatal) (MyHC-perinatal) (Fragment)"
ruditapes_lrc32162	biological_process	other biological processes	P	"Myosin-8 (Myosin heavy chain 8) (Myosin heavy chain, skeletal muscle, perinatal) (MyHC-perinatal) (Fragment)"
ruditapes_c21315	negative regulation of peptidase activity	other biological processes	P	Pancreatic secretory trypsin inhibitor (Serine protease inhibitor Kazal-type 1)
ruditapes_c20225	interspecies interaction between organisms	other biological processes	P	Non-structural protein 1 (NS1) (Non-structural protein 1C)
ruditapes_c20225	evasion by virus of host immune response	stress response	P	Non-structural protein 1 (NS1) (Non-structural protein 1C)
ruditapes_c20225	apoptosis	death	P	Non-structural protein 1 (NS1) (Non-structural protein 1C)
ruditapes_s37545	translational elongation	protein metabolism	P	40S ribosomal protein S17
ruditapes_s38683	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_s37545	ribosomal small subunit assembly	cell organization and biogenesis	P	40S ribosomal protein S17
ruditapes_s38683	biological_process	other biological processes	P	40S ribosomal protein S17
ruditapes_s38683	translational elongation	protein metabolism	P	40S ribosomal protein S17
ruditapes_s37545	biological_process	other biological processes	P	40S ribosomal protein S17
ruditapes_s37545	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_s38683	ribosomal small subunit assembly	cell organization and biogenesis	P	40S ribosomal protein S17
ruditapes_lrc34338	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes2_lrc4901	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes_lrc32772	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes2_lrc5113	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes2_lrc5557	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes2_lrc4338	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes_lrc34740	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes2_lrc4983	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes_lrc26308	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes2_lrc5368	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes_lrc34463	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes2_c1376	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-1 chain
ruditapes2_c1376	microtubule cytoskeleton organization	cell organization and biogenesis	P	Tubulin alpha-1 chain
ruditapes2_c1376	microtubule-based movement	other biological processes	P	Tubulin alpha-1 chain
ruditapes2_c1376	GTP catabolic process	other metabolic processes	P	Tubulin alpha-1 chain
ruditapes2_c1376	microtubule-based process	other biological processes	P	Tubulin alpha-1 chain
ruditapes_c1722	negative regulation of protein kinase activity	other metabolic processes	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	mRNA metabolic process	RNA metabolism	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	response to virus	other biological processes	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	blood vessel endothelial cell migration	other biological processes	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	negative regulation of phosphorylation	other metabolic processes	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	angiogenesis	developmental processes	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	response to unfolded protein	stress response	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	positive regulation of tumor necrosis factor biosynthetic process	other metabolic processes	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	negative regulation of apoptosis	death	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	RNA metabolic process	RNA metabolism	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	cell motion	other biological processes	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	response to stress	stress response	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	positive regulation of interleukin-1 beta production	other biological processes	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	anti-apoptosis	death	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	cell death	death	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	regulation of translational initiation	protein metabolism	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c1722	gene expression	other metabolic processes	P	Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27)
ruditapes_c7455	mitochondrial tryptophanyl-tRNA aminoacylation	protein metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_c7455	mitochondrial tryptophanyl-tRNA aminoacylation	RNA metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_c7455	mitochondrial tryptophanyl-tRNA aminoacylation	cell organization and biogenesis	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_c7455	tRNA aminoacylation for protein translation	protein metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_c7455	tRNA aminoacylation for protein translation	RNA metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_c7455	tryptophanyl-tRNA aminoacylation	protein metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_c7455	tryptophanyl-tRNA aminoacylation	RNA metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_c7455	translation	protein metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_lrc8216	protein folding	protein metabolism	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes_lrc8216	response to stress	stress response	P	Heat shock protein 83 (HSP 82) (Fragment)
ruditapes_c11612	digestion	other biological processes	P	Chymotrypsinogen 2 (EC 3.4.21.1) [Cleaved into: Chymotrypsin 2 chain A; Chymotrypsin 2 chain B; Chymotrypsin 2 chain C]
ruditapes_c11612	proteolysis	protein metabolism	P	Chymotrypsinogen 2 (EC 3.4.21.1) [Cleaved into: Chymotrypsin 2 chain A; Chymotrypsin 2 chain B; Chymotrypsin 2 chain C]
ruditapes_c20966	mitosis	cell cycle and proliferation	P	Cell division control protein 25
ruditapes_c20966	mitosis	cell organization and biogenesis	P	Cell division control protein 25
ruditapes_c31462	cell cycle	cell cycle and proliferation	P	Cell division control protein 25
ruditapes_c20966	replicative cell aging	other biological processes	P	Cell division control protein 25
ruditapes_c31462	cell division	other biological processes	P	Cell division control protein 25
ruditapes_c20966	regulation of cell cycle	cell cycle and proliferation	P	Cell division control protein 25
ruditapes_c31462	traversing start control point of mitotic cell cycle	cell cycle and proliferation	P	Cell division control protein 25
ruditapes_c31462	small GTPase mediated signal transduction	signal transduction	P	Cell division control protein 25
ruditapes_c31462	regulation of cell cycle	cell cycle and proliferation	P	Cell division control protein 25
ruditapes_c31462	Ras protein signal transduction	signal transduction	P	Cell division control protein 25
ruditapes_c20966	Ras protein signal transduction	signal transduction	P	Cell division control protein 25
ruditapes_c31462	regulation of small GTPase mediated signal transduction	signal transduction	P	Cell division control protein 25
ruditapes_c31462	replicative cell aging	other biological processes	P	Cell division control protein 25
ruditapes_c20966	small GTPase mediated signal transduction	signal transduction	P	Cell division control protein 25
ruditapes_c20966	cell cycle	cell cycle and proliferation	P	Cell division control protein 25
ruditapes_c20966	cell division	other biological processes	P	Cell division control protein 25
ruditapes_c31462	mitosis	cell cycle and proliferation	P	Cell division control protein 25
ruditapes_c31462	mitosis	cell organization and biogenesis	P	Cell division control protein 25
ruditapes_c20966	regulation of small GTPase mediated signal transduction	signal transduction	P	Cell division control protein 25
ruditapes_c20966	traversing start control point of mitotic cell cycle	cell cycle and proliferation	P	Cell division control protein 25
ruditapes_c15110	positive regulation of angiogenesis	developmental processes	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	negative regulation of cell proliferation	cell cycle and proliferation	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	positive regulation of cytokine secretion	transport	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	response to copper ion	other biological processes	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	cellular response to heat	stress response	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	fever	stress response	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	immune response	other biological processes	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	positive regulation of cell division	other biological processes	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	cytokine-mediated signaling pathway	signal transduction	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	positive regulation of interleukin-2 biosynthetic process	other metabolic processes	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	inflammatory response	stress response	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	positive regulation vascular endothelial growth factor production	other biological processes	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	positive regulation of mitosis	cell cycle and proliferation	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c15110	positive regulation of mitosis	cell organization and biogenesis	P	Interleukin-1 alpha (IL-1 alpha)
ruditapes_c13632	induction by virus of cell-cell fusion in host	other biological processes	P	Fusion glycoprotein F0 (Protein F) [Cleaved into: Fusion glycoprotein F2; Fusion glycoprotein F1]
ruditapes2_lrc4146	DNA recombination	DNA metabolism	P	Integrase
ruditapes2_lrc4146	DNA integration	DNA metabolism	P	Integrase
ruditapes_c23884	nucleosome assembly	cell organization and biogenesis	P	Histone H4
ruditapes_c26570	acute-phase response	stress response	P	Serum amyloid A-3 protein
ruditapes2_c1177	acute-phase response	stress response	P	Serum amyloid A-3 protein
ruditapes_c2177	acute-phase response	stress response	P	Serum amyloid A-3 protein
ruditapes_c19262	ion transport	transport	P	Anion exchange protein 2 (AE 2) (Anion exchanger 2) (Non-erythroid band 3-like protein) (BND3L) (Solute carrier family 4 member 2)
ruditapes_c19262	bicarbonate transport	transport	P	Anion exchange protein 2 (AE 2) (Anion exchanger 2) (Non-erythroid band 3-like protein) (BND3L) (Solute carrier family 4 member 2)
ruditapes_c19262	transmembrane transport	transport	P	Anion exchange protein 2 (AE 2) (Anion exchanger 2) (Non-erythroid band 3-like protein) (BND3L) (Solute carrier family 4 member 2)
ruditapes_c19262	transmembrane ion transport	transport	P	Anion exchange protein 2 (AE 2) (Anion exchanger 2) (Non-erythroid band 3-like protein) (BND3L) (Solute carrier family 4 member 2)
ruditapes_c19262	chloride transport	transport	P	Anion exchange protein 2 (AE 2) (Anion exchanger 2) (Non-erythroid band 3-like protein) (BND3L) (Solute carrier family 4 member 2)
ruditapes_c19262	anion transport	transport	P	Anion exchange protein 2 (AE 2) (Anion exchanger 2) (Non-erythroid band 3-like protein) (BND3L) (Solute carrier family 4 member 2)
ruditapes_c19262	transport	transport	P	Anion exchange protein 2 (AE 2) (Anion exchanger 2) (Non-erythroid band 3-like protein) (BND3L) (Solute carrier family 4 member 2)
ruditapes2_c226	vesicle-mediated transport	transport	P	Clathrin light chain A (Lca)
ruditapes2_c226	intracellular protein transport	transport	P	Clathrin light chain A (Lca)
ruditapes_c22750	response to virus	other biological processes	P	Interferon alpha-D
ruditapes_c22750	defense response	stress response	P	Interferon alpha-D
ruditapes_lrc13983	blood coagulation	stress response	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	angiogenesis involved in wound healing	stress response	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	angiogenesis involved in wound healing	developmental processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	interspecies interaction between organisms	other biological processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	multicellular organismal development	developmental processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	platelet degranulation	transport	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	positive regulation of endothelial cell migration	other biological processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	cell-substrate junction assembly	cell organization and biogenesis	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	smooth muscle cell migration	other biological processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	negative regulation of lipid transport	transport	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	integrin-mediated signaling pathway	signal transduction	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	platelet activation	stress response	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	cell adhesion	cell adhesion	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	cell-matrix adhesion	cell adhesion	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	regulation of bone resorption	other biological processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	negative regulation of low-density lipoprotein receptor biosynthetic process	other metabolic processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	negative regulation of lipid storage	other biological processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	positive regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	positive regulation of vascular endothelial growth factor receptor signaling pathway	signal transduction	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	leukocyte migration	other biological processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	platelet aggregation	stress response	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	platelet aggregation	cell adhesion	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	positive regulation of osteoblast proliferation	cell cycle and proliferation	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	regulation of cell migration	other biological processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	positive regulation of endothelial cell proliferation	cell cycle and proliferation	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	negative regulation of lipoprotein metabolic process	protein metabolism	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	negative regulation of foam cell differentiation	developmental processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	axon guidance	developmental processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	axon guidance	cell organization and biogenesis	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	activation of protein kinase activity	other metabolic processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	positive regulation of cell migration	other biological processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	tube development	developmental processes	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_lrc13983	wound healing	stress response	P	Integrin beta-3 (Platelet membrane glycoprotein IIIa) (GPIIIa) (CD antigen CD61)
ruditapes_c8446	chronic inflammatory response	stress response	P	"Protein S100-A8 (Calgranulin-A) (Calprotectin L1L subunit) (Cystic fibrosis antigen) (CFAG) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (S100 calcium-binding protein A8) (Urinary stone protein band A) [Cleaved into: Protein S100-A8, N-terminally processed]"
ruditapes_c8446	wound healing	stress response	P	"Protein S100-A8 (Calgranulin-A) (Calprotectin L1L subunit) (Cystic fibrosis antigen) (CFAG) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (S100 calcium-binding protein A8) (Urinary stone protein band A) [Cleaved into: Protein S100-A8, N-terminally processed]"
ruditapes_c8446	inflammatory response	stress response	P	"Protein S100-A8 (Calgranulin-A) (Calprotectin L1L subunit) (Cystic fibrosis antigen) (CFAG) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (S100 calcium-binding protein A8) (Urinary stone protein band A) [Cleaved into: Protein S100-A8, N-terminally processed]"
ruditapes_c8446	response to zinc ion	other biological processes	P	"Protein S100-A8 (Calgranulin-A) (Calprotectin L1L subunit) (Cystic fibrosis antigen) (CFAG) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (S100 calcium-binding protein A8) (Urinary stone protein band A) [Cleaved into: Protein S100-A8, N-terminally processed]"
ruditapes_c8446	chemotaxis	other biological processes	P	"Protein S100-A8 (Calgranulin-A) (Calprotectin L1L subunit) (Cystic fibrosis antigen) (CFAG) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (S100 calcium-binding protein A8) (Urinary stone protein band A) [Cleaved into: Protein S100-A8, N-terminally processed]"
ruditapes_c8446	acute inflammatory response	stress response	P	"Protein S100-A8 (Calgranulin-A) (Calprotectin L1L subunit) (Cystic fibrosis antigen) (CFAG) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (S100 calcium-binding protein A8) (Urinary stone protein band A) [Cleaved into: Protein S100-A8, N-terminally processed]"
ruditapes_c8446	response to lipopolysaccharide	other biological processes	P	"Protein S100-A8 (Calgranulin-A) (Calprotectin L1L subunit) (Cystic fibrosis antigen) (CFAG) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (S100 calcium-binding protein A8) (Urinary stone protein band A) [Cleaved into: Protein S100-A8, N-terminally processed]"
ruditapes_c8446	response to ethanol	other biological processes	P	"Protein S100-A8 (Calgranulin-A) (Calprotectin L1L subunit) (Cystic fibrosis antigen) (CFAG) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (S100 calcium-binding protein A8) (Urinary stone protein band A) [Cleaved into: Protein S100-A8, N-terminally processed]"
ruditapes_c9539	wound healing	stress response	P	Plasminogen activator inhibitor 2 (PAI-2) (Monocyte Arg-serpin) (Placental plasminogen activator inhibitor) (Serpin B2) (Urokinase inhibitor)
ruditapes_c9539	fibrinolysis	stress response	P	Plasminogen activator inhibitor 2 (PAI-2) (Monocyte Arg-serpin) (Placental plasminogen activator inhibitor) (Serpin B2) (Urokinase inhibitor)
ruditapes_c9539	negative regulation of endopeptidase activity	other biological processes	P	Plasminogen activator inhibitor 2 (PAI-2) (Monocyte Arg-serpin) (Placental plasminogen activator inhibitor) (Serpin B2) (Urokinase inhibitor)
ruditapes_c9539	blood coagulation	stress response	P	Plasminogen activator inhibitor 2 (PAI-2) (Monocyte Arg-serpin) (Placental plasminogen activator inhibitor) (Serpin B2) (Urokinase inhibitor)
ruditapes_c9539	anti-apoptosis	death	P	Plasminogen activator inhibitor 2 (PAI-2) (Monocyte Arg-serpin) (Placental plasminogen activator inhibitor) (Serpin B2) (Urokinase inhibitor)
ruditapes_c9539	regulation of proteolysis	protein metabolism	P	Plasminogen activator inhibitor 2 (PAI-2) (Monocyte Arg-serpin) (Placental plasminogen activator inhibitor) (Serpin B2) (Urokinase inhibitor)
ruditapes_c9539	negative regulation of peptidase activity	other biological processes	P	Plasminogen activator inhibitor 2 (PAI-2) (Monocyte Arg-serpin) (Placental plasminogen activator inhibitor) (Serpin B2) (Urokinase inhibitor)
ruditapes_lrc35069	response to freezing	stress response	P	Type-2 ice-structuring protein (Type II antifreeze protein) (AFP)
ruditapes_c15747	carbohydrate metabolic process	other metabolic processes	P	"Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (PEPCK-C) (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase)"
ruditapes_c15747	gluconeogenesis	other metabolic processes	P	"Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (PEPCK-C) (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase)"
ruditapes_s38046	platelet activation	stress response	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_s38046	innate immune response	stress response	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_s38046	"complement activation, classical pathway"	stress response	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_s38046	"complement activation, classical pathway"	protein metabolism	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_s38046	negative regulation of endopeptidase activity	other biological processes	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_s38046	blood circulation	other biological processes	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_s38046	"negative regulation of complement activation, lectin pathway"	stress response	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_s38046	"negative regulation of complement activation, lectin pathway"	protein metabolism	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_s38046	platelet degranulation	transport	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_s38046	"blood coagulation, intrinsic pathway"	stress response	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_s38046	blood coagulation	stress response	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_s38046	negative regulation of peptidase activity	other biological processes	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_c19371	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	regulation of histone methylation	protein metabolism	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	regulation of histone methylation	cell organization and biogenesis	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	chromatin silencing	RNA metabolism	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	chromatin silencing at centromere	RNA metabolism	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	histone H4-K20 trimethylation	protein metabolism	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	histone H4-K20 trimethylation	cell organization and biogenesis	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	establishment of chromatin silencing	RNA metabolism	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	establishment of chromatin silencing	cell organization and biogenesis	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	regulation of apoptosis	death	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	DNA hypermethylation	DNA metabolism	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	chromatin modification	cell organization and biogenesis	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	chromosome organization	cell organization and biogenesis	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	telomere maintenance	DNA metabolism	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	telomere maintenance	cell organization and biogenesis	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	"transcription, DNA-dependent"	RNA metabolism	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c19371	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Heterochromatin protein 1 (HP1) (Non-histone chromosomal protein C1A9 antigen)
ruditapes_c15739	interspecies interaction between organisms	other biological processes	P	Outer capsid protein VP2
ruditapes_lrc28818	acute-phase response	stress response	P	Serum amyloid A-1 protein
ruditapes_lrc28818	cholesterol metabolic process	other metabolic processes	P	Serum amyloid A-1 protein
ruditapes_c13884	RNA-dependent DNA replication	DNA metabolism	P	Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)]
ruditapes_c13884	proteolysis	protein metabolism	P	Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)]
ruditapes2_lrc3869	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_c16409	ion transport	transport	P	"ATP synthase gamma chain, chloroplastic (F-ATPase gamma subunit)"
ruditapes_c16409	transport	transport	P	"ATP synthase gamma chain, chloroplastic (F-ATPase gamma subunit)"
ruditapes_c16409	ATP synthesis coupled proton transport	transport	P	"ATP synthase gamma chain, chloroplastic (F-ATPase gamma subunit)"
ruditapes_c16409	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase gamma chain, chloroplastic (F-ATPase gamma subunit)"
ruditapes_c16409	proton transport	transport	P	"ATP synthase gamma chain, chloroplastic (F-ATPase gamma subunit)"
ruditapes_c16409	ATP biosynthetic process	other metabolic processes	P	"ATP synthase gamma chain, chloroplastic (F-ATPase gamma subunit)"
ruditapes_c1401	fatty acid metabolic process	other metabolic processes	P	Acyl transferase (ACT) (EC 2.3.1.-) (C14ACP-TE) (Myristoyl-ACP-specific thioesterase)
ruditapes_c1401	bioluminescence	other metabolic processes	P	Acyl transferase (ACT) (EC 2.3.1.-) (C14ACP-TE) (Myristoyl-ACP-specific thioesterase)
ruditapes_lrc39163	negative regulation of peptidase activity	other biological processes	P	Ovomucoid (OVM)
ruditapes2_lrc6761	negative regulation of peptidase activity	other biological processes	P	Ovomucoid (OVM)
ruditapes_lrc21367	negative regulation of peptidase activity	other biological processes	P	Ovomucoid (OVM)
ruditapes2_c2937	negative regulation of peptidase activity	other biological processes	P	Ovomucoid (Fragment)
ruditapes2_c558	proteolysis	protein metabolism	P	Thrombin-like enzyme flavoxobin (SVTLE) (EC 3.4.21.74) (Fibrinogen-clotting enzyme) (Habutobin) (Snake venom serine protease 1) (SVSP)
ruditapes2_c558	blood coagulation	stress response	P	Thrombin-like enzyme flavoxobin (SVTLE) (EC 3.4.21.74) (Fibrinogen-clotting enzyme) (Habutobin) (Snake venom serine protease 1) (SVSP)
ruditapes_lrc33428	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33445	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32910	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32780	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c5546	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33849	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35753	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33849	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33445	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33445	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33445	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32587	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c3961	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35343	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32780	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c5546	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32587	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s35306	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33428	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c3961	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32624	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s37714	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32587	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32587	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33849	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33428	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s35306	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35343	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s35306	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s35306	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c5546	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32780	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33849	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32624	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35753	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s37714	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32780	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c3961	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c3961	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32910	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35343	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c5546	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32910	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33428	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33428	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32624	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s37714	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s37714	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35343	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32587	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33849	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33849	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33445	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32910	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s37714	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32910	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32624	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32624	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32780	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32780	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33428	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc33445	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c5546	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s35306	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c3961	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c5546	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35753	proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35343	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35343	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32587	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35753	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32910	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c3961	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35753	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc35753	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s37714	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc32624	transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_s35306	ion transport	transport	P	"ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_lrc34216	plasmid maintenance	other biological processes	P	Putative replication protein A
ruditapes_lrc34216	DNA replication	DNA metabolism	P	Putative replication protein A
ruditapes_c17835	glucuronoside catabolic process	other metabolic processes	P	Beta-glucuronidase (GUS) (EC 3.2.1.31) (Beta-D-glucuronoside glucuronosohydrolase)
ruditapes_c17835	carbohydrate metabolic process	other metabolic processes	P	Beta-glucuronidase (GUS) (EC 3.2.1.31) (Beta-D-glucuronoside glucuronosohydrolase)
ruditapes_c17835	metabolic process	other metabolic processes	P	Beta-glucuronidase (GUS) (EC 3.2.1.31) (Beta-D-glucuronoside glucuronosohydrolase)
ruditapes2_c1936	viral genome replication	other biological processes	P	Putative non-capsid protein NS-1 (NCVP1) (Non-structural protein NS1)
ruditapes_c30139	viral infectious cycle	other biological processes	P	Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7] (Fragment)
ruditapes_c30139	RNA-dependent DNA replication	DNA metabolism	P	Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7] (Fragment)
ruditapes_c30139	interspecies interaction between organisms	other biological processes	P	Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7] (Fragment)
ruditapes_c30139	viral reproduction	other biological processes	P	Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7] (Fragment)
ruditapes_c30139	entry into host cell	other biological processes	P	Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7] (Fragment)
ruditapes_c30139	uncoating of virus	other biological processes	P	Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7] (Fragment)
ruditapes_c30139	provirus integration	DNA metabolism	P	Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7] (Fragment)
ruditapes_c30139	initiation of viral infection	other biological processes	P	Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7] (Fragment)
ruditapes_lrc8854	bioluminescence	other metabolic processes	P	Luciferin-binding protein (LBP)
ruditapes2_c491	viral reproduction	other biological processes	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes2_c491	DNA integration	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c22260	viral reproduction	other biological processes	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes2_c491	RNA-dependent DNA replication	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes2_c491	viral procapsid maturation	cell organization and biogenesis	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes2_c491	proteolysis	protein metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c22260	proteolysis	protein metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c22260	RNA-dependent DNA replication	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes2_c491	DNA recombination	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c22260	DNA recombination	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes2_c491	metabolic process	other metabolic processes	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c22260	viral procapsid maturation	cell organization and biogenesis	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c22260	DNA integration	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c22260	metabolic process	other metabolic processes	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c10608	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	CAD protein (Protein rudimentary) [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c10608	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CAD protein (Protein rudimentary) [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c10608	nitrogen compound metabolic process	other metabolic processes	P	CAD protein (Protein rudimentary) [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c10608	glutamine metabolic process	other metabolic processes	P	CAD protein (Protein rudimentary) [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c10608	metabolic process	other metabolic processes	P	CAD protein (Protein rudimentary) [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c10608	glutamine catabolic process	other metabolic processes	P	CAD protein (Protein rudimentary) [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c10608	carbamoyl phosphate biosynthetic process	other metabolic processes	P	CAD protein (Protein rudimentary) [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c10608	cellular amino acid metabolic process	other metabolic processes	P	CAD protein (Protein rudimentary) [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c7389	regulation of cell cycle	cell cycle and proliferation	P	Hsp90 co-chaperone Cdc37 (Cell division control protein 37) (Hsp90 chaperone protein kinase-targeting subunit)
ruditapes_c7389	spindle pole body duplication in nuclear envelope	cell cycle and proliferation	P	Hsp90 co-chaperone Cdc37 (Cell division control protein 37) (Hsp90 chaperone protein kinase-targeting subunit)
ruditapes_c7389	spindle pole body duplication in nuclear envelope	cell organization and biogenesis	P	Hsp90 co-chaperone Cdc37 (Cell division control protein 37) (Hsp90 chaperone protein kinase-targeting subunit)
ruditapes_c7389	MAPKKK cascade involved in osmosensory signaling pathway	signal transduction	P	Hsp90 co-chaperone Cdc37 (Cell division control protein 37) (Hsp90 chaperone protein kinase-targeting subunit)
ruditapes_c7389	MAPKKK cascade involved in osmosensory signaling pathway	stress response	P	Hsp90 co-chaperone Cdc37 (Cell division control protein 37) (Hsp90 chaperone protein kinase-targeting subunit)
ruditapes_c7389	cell cycle	cell cycle and proliferation	P	Hsp90 co-chaperone Cdc37 (Cell division control protein 37) (Hsp90 chaperone protein kinase-targeting subunit)
ruditapes_c7389	protein stabilization	protein metabolism	P	Hsp90 co-chaperone Cdc37 (Cell division control protein 37) (Hsp90 chaperone protein kinase-targeting subunit)
ruditapes_c7389	regulation of stress-activated MAPK cascade	signal transduction	P	Hsp90 co-chaperone Cdc37 (Cell division control protein 37) (Hsp90 chaperone protein kinase-targeting subunit)
ruditapes_c7389	regulation of stress-activated MAPK cascade	stress response	P	Hsp90 co-chaperone Cdc37 (Cell division control protein 37) (Hsp90 chaperone protein kinase-targeting subunit)
ruditapes_c7389	cell division	other biological processes	P	Hsp90 co-chaperone Cdc37 (Cell division control protein 37) (Hsp90 chaperone protein kinase-targeting subunit)
ruditapes_c5274	phospholipid biosynthetic process	other metabolic processes	P	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (EC 2.7.8.11) (Phosphatidylinositol synthase) (PI synthase) (PtdIns synthase)
ruditapes_c5274	phosphatidylinositol biosynthetic process	other metabolic processes	P	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (EC 2.7.8.11) (Phosphatidylinositol synthase) (PI synthase) (PtdIns synthase)
ruditapes_c13592	cytolysis	death	P	Hemolytic phospholipase C (EC 3.1.4.3) (Heat-labile hemolysin) (PLC-H) (Phosphatidylcholine cholinephosphohydrolase)
ruditapes_c13592	lipid catabolic process	other metabolic processes	P	Hemolytic phospholipase C (EC 3.1.4.3) (Heat-labile hemolysin) (PLC-H) (Phosphatidylcholine cholinephosphohydrolase)
ruditapes_c7328	stem cell differentiation	other biological processes	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c7328	response to chemical stimulus	other biological processes	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c7328	acute-phase response	stress response	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c7328	response to carbon dioxide	other biological processes	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c7328	response to wounding	stress response	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c7328	negative regulation of peptidase activity	other biological processes	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c7328	response to glucocorticoid stimulus	other biological processes	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c7328	inflammatory response	stress response	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c7328	"negative regulation of complement activation, lectin pathway"	stress response	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c7328	"negative regulation of complement activation, lectin pathway"	protein metabolism	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c7328	negative regulation of endopeptidase activity	other biological processes	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c7328	response to nutrient	other biological processes	P	Alpha-2-macroglobulin (Alpha-2-M)
ruditapes_c30525	complement activation	stress response	P	Ig lambda chain V-VI region SUT
ruditapes_c30525	complement activation	protein metabolism	P	Ig lambda chain V-VI region SUT
ruditapes_c30525	"complement activation, classical pathway"	stress response	P	Ig lambda chain V-VI region SUT
ruditapes_c30525	"complement activation, classical pathway"	protein metabolism	P	Ig lambda chain V-VI region SUT
ruditapes_c30525	innate immune response	stress response	P	Ig lambda chain V-VI region SUT
ruditapes_c30525	regulation of immune response	other biological processes	P	Ig lambda chain V-VI region SUT
ruditapes_lrc38876	nucleosome assembly	cell organization and biogenesis	P	Histone H3.3 (Fragment)
ruditapes_c25200	translation	protein metabolism	P	"50S ribosomal protein L23, chloroplastic"
ruditapes_c9705	interspecies interaction between organisms	other biological processes	P	Protein E7
ruditapes_c9705	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein E7
ruditapes_c9705	"transcription, DNA-dependent"	RNA metabolism	P	Protein E7
ruditapes_c31105	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein B (gB) (gB-1) (gB1)
ruditapes_c27603	interspecies interaction between organisms	other biological processes	P	Protein E6
ruditapes_c27603	evasion by virus of host immune response	stress response	P	Protein E6
ruditapes_c27603	"transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c27603	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c20097	interspecies interaction between organisms	other biological processes	P	Protein E6
ruditapes_c20097	evasion by virus of host immune response	stress response	P	Protein E6
ruditapes_c20097	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c20097	"transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes2_lrc4762	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	generation of precursor metabolites and energy	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	negative regulation of cell adhesion involved in substrate-bound cell migration	cell adhesion	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	ADP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	regulation of intracellular pH	other biological processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	lipid metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	receptor-mediated endocytosis	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	receptor-mediated endocytosis	cell organization and biogenesis	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	angiogenesis	developmental processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4762	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c29764	oxygen transport	transport	P	Hemoglobin subunit alpha-2 (Alpha-2-globin) (Hemoglobin alpha-2 chain) (Hemoglobin alpha-minor chain) (Fragment)
ruditapes_c29764	transport	transport	P	Hemoglobin subunit alpha-2 (Alpha-2-globin) (Hemoglobin alpha-2 chain) (Hemoglobin alpha-minor chain) (Fragment)
ruditapes_c8370	"complement activation, classical pathway"	stress response	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	"complement activation, classical pathway"	protein metabolism	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	innate immune response	stress response	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	positive regulation vascular endothelial growth factor production	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	negative regulation of endopeptidase activity	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	negative regulation of dopamine secretion	transport	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	negative regulation of endopeptidase activity	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	glucose homeostasis	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	inflammatory response	stress response	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	cellular calcium ion homeostasis	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	leukocyte migration during inflammatory response	stress response	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	chemotaxis	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	"complement activation, alternative pathway"	stress response	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	"complement activation, alternative pathway"	protein metabolism	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	induction of apoptosis	death	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	positive regulation of angiogenesis	developmental processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	innate immune response	stress response	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	cytolysis	death	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	positive regulation of chemotaxis	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	glucose homeostasis	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	positive regulation of angiogenesis	developmental processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	"complement activation, alternative pathway"	stress response	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	"complement activation, alternative pathway"	protein metabolism	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	negative regulation of macrophage chemotaxis	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	in utero embryonic development	developmental processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	cytolysis	death	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	inflammatory response	stress response	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	cellular calcium ion homeostasis	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	negative regulation of norepinephrine secretion	transport	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	leukocyte migration during inflammatory response	stress response	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	negative regulation of norepinephrine secretion	transport	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	positive regulation of chemotaxis	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	"complement activation, classical pathway"	stress response	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	"complement activation, classical pathway"	protein metabolism	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	induction of apoptosis	death	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	in utero embryonic development	developmental processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	negative regulation of macrophage chemotaxis	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c4290	negative regulation of dopamine secretion	transport	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	positive regulation vascular endothelial growth factor production	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c8370	chemotaxis	other biological processes	P	Complement C5 (Hemolytic complement) [Cleaved into: Complement C5 beta chain; Complement C5 alpha chain; C5a anaphylatoxin; Complement C5 alpha' chain]
ruditapes_c5516	glucose homeostasis	other biological processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c9810	carbohydrate metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c9810	glucose homeostasis	other biological processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c9810	glycogen metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c5516	glucose metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c25232	5-phosphoribose 1-diphosphate biosynthetic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c9810	metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c5516	glycogen metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c25232	carbohydrate metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c9810	5-phosphoribose 1-diphosphate biosynthetic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c25232	glycogen catabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c25232	glucose homeostasis	other biological processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c5516	carbohydrate metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c25232	glycogen metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c5516	metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c9810	glycogen catabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c5516	5-phosphoribose 1-diphosphate biosynthetic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c25232	metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c9810	glucose metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c5516	glycogen catabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_c25232	glucose metabolic process	other metabolic processes	P	"Glycogen phosphorylase, liver form (EC 2.4.1.1)"
ruditapes_lrc19143	metabolic process	other metabolic processes	P	Beta-glucuronidase (EC 3.2.1.31)
ruditapes_lrc19143	carbohydrate metabolic process	other metabolic processes	P	Beta-glucuronidase (EC 3.2.1.31)
ruditapes2_c2697	regulation of cellular respiration	other metabolic processes	P	Transcriptional activator HAP2
ruditapes2_c2697	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator HAP2
ruditapes2_c2697	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator HAP2
ruditapes2_c2697	positive regulation of transcription from RNA polymerase II promoter by carbon catabolites	RNA metabolism	P	Transcriptional activator HAP2
ruditapes_c24629	double-strand break repair via homologous recombination	stress response	P	DNA repair protein RAD1
ruditapes_c24629	double-strand break repair via homologous recombination	DNA metabolism	P	DNA repair protein RAD1
ruditapes_c24629	DNA repair	stress response	P	DNA repair protein RAD1
ruditapes_c24629	DNA repair	DNA metabolism	P	DNA repair protein RAD1
ruditapes_c24629	meiotic mismatch repair	cell cycle and proliferation	P	DNA repair protein RAD1
ruditapes_c24629	meiotic mismatch repair	stress response	P	DNA repair protein RAD1
ruditapes_c24629	"nucleotide-excision repair, DNA incision, 5'-to lesion"	stress response	P	DNA repair protein RAD1
ruditapes_c24629	"nucleotide-excision repair, DNA incision, 5'-to lesion"	DNA metabolism	P	DNA repair protein RAD1
ruditapes_c24629	"double-strand break repair via single-strand annealing, removal of nonhomologous ends"	stress response	P	DNA repair protein RAD1
ruditapes_c24629	"double-strand break repair via single-strand annealing, removal of nonhomologous ends"	DNA metabolism	P	DNA repair protein RAD1
ruditapes_c24629	DNA metabolic process	DNA metabolism	P	DNA repair protein RAD1
ruditapes_c24629	meiotic mismatch repair	DNA metabolism	P	DNA repair protein RAD1
ruditapes_c24629	removal of nonhomologous ends	DNA metabolism	P	DNA repair protein RAD1
ruditapes_c24629	resolution of meiotic joint molecules as recombinants	cell cycle and proliferation	P	DNA repair protein RAD1
ruditapes_c24629	resolution of meiotic joint molecules as recombinants	DNA metabolism	P	DNA repair protein RAD1
ruditapes_c24629	mitotic recombination	DNA metabolism	P	DNA repair protein RAD1
ruditapes_c24629	response to DNA damage stimulus	stress response	P	DNA repair protein RAD1
ruditapes_c25735	budding cell bud growth	other biological processes	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	actin cytoskeleton reorganization	cell organization and biogenesis	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	positive regulation of endocytosis	transport	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	positive regulation of endocytosis	cell organization and biogenesis	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	GTP catabolic process	other metabolic processes	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	small GTPase mediated signal transduction	signal transduction	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	regulation of fungal-type cell wall organization	cell organization and biogenesis	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	regulation of cell size	other biological processes	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	actin cytoskeleton organization	cell organization and biogenesis	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	regulation of exocyst localization	other biological processes	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	"regulation of vacuole fusion, non-autophagic"	cell organization and biogenesis	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	signal transduction	signal transduction	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	regulation of protein localization	other biological processes	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c25735	"regulation of fungal-type cell wall 1,3-alpha-glucan biosynthetic process"	other metabolic processes	P	GTP-binding protein RHO1 (Rho-type GTPase 1)
ruditapes_c22600	proteolysis	protein metabolism	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c22600	tissue remodeling	other biological processes	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c22600	blood coagulation	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c12012	blood coagulation	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c12012	fibrinolysis	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c12012	tissue remodeling	other biological processes	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c12012	proteolysis	protein metabolism	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c22600	fibrinolysis	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_lrc33051	proteolysis	protein metabolism	P	Cationic trypsin (EC 3.4.21.4)
ruditapes_lrc35469	proteolysis	protein metabolism	P	Cationic trypsin (EC 3.4.21.4)
ruditapes_lrc33051	digestion	other biological processes	P	Cationic trypsin (EC 3.4.21.4)
ruditapes_lrc35469	digestion	other biological processes	P	Cationic trypsin (EC 3.4.21.4)
ruditapes_lrc33451	response to lipopolysaccharide	other biological processes	P	Thyroglobulin (Tg)
ruditapes_c2109	hormone biosynthetic process	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_c2109	response to pH	other biological processes	P	Thyroglobulin (Tg)
ruditapes2_c3422	transcytosis	transport	P	Thyroglobulin (Tg)
ruditapes_c27066	response to lipopolysaccharide	other biological processes	P	Thyroglobulin (Tg)
ruditapes_c2109	thyroid hormone metabolic process	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes2_c4395	regulation of myelination	developmental processes	P	Thyroglobulin (Tg)
ruditapes_c27066	thyroid hormone metabolic process	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_c27066	hormone biosynthetic process	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_lrc33451	synaptogenesis	developmental processes	P	Thyroglobulin (Tg)
ruditapes_lrc33451	synaptogenesis	cell organization and biogenesis	P	Thyroglobulin (Tg)
ruditapes_c27066	synaptogenesis	developmental processes	P	Thyroglobulin (Tg)
ruditapes_c27066	synaptogenesis	cell organization and biogenesis	P	Thyroglobulin (Tg)
ruditapes_c2109	synaptogenesis	developmental processes	P	Thyroglobulin (Tg)
ruditapes_c2109	synaptogenesis	cell organization and biogenesis	P	Thyroglobulin (Tg)
ruditapes2_c3422	synaptogenesis	developmental processes	P	Thyroglobulin (Tg)
ruditapes2_c3422	synaptogenesis	cell organization and biogenesis	P	Thyroglobulin (Tg)
ruditapes2_c3422	regulation of myelination	developmental processes	P	Thyroglobulin (Tg)
ruditapes2_c4395	response to lipopolysaccharide	other biological processes	P	Thyroglobulin (Tg)
ruditapes2_c3422	thyroid hormone generation	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_c27066	response to pH	other biological processes	P	Thyroglobulin (Tg)
ruditapes2_c3422	response to pH	other biological processes	P	Thyroglobulin (Tg)
ruditapes_c27066	thyroid hormone generation	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes2_c3422	iodide transport	transport	P	Thyroglobulin (Tg)
ruditapes2_c3422	hormone biosynthetic process	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_lrc33451	response to pH	other biological processes	P	Thyroglobulin (Tg)
ruditapes_c2109	regulation of myelination	developmental processes	P	Thyroglobulin (Tg)
ruditapes_c2109	response to lipopolysaccharide	other biological processes	P	Thyroglobulin (Tg)
ruditapes_c27066	regulation of myelination	developmental processes	P	Thyroglobulin (Tg)
ruditapes2_c3422	thyroid hormone metabolic process	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_c27066	iodide transport	transport	P	Thyroglobulin (Tg)
ruditapes_lrc33451	thyroid hormone generation	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes2_c4395	thyroid gland development	developmental processes	P	Thyroglobulin (Tg)
ruditapes2_c4395	transcytosis	transport	P	Thyroglobulin (Tg)
ruditapes_lrc33451	iodide transport	transport	P	Thyroglobulin (Tg)
ruditapes_lrc33451	hormone biosynthetic process	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_lrc33451	thyroid hormone metabolic process	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_c2109	thyroid gland development	developmental processes	P	Thyroglobulin (Tg)
ruditapes2_c3422	thyroid gland development	developmental processes	P	Thyroglobulin (Tg)
ruditapes2_c4395	thyroid hormone generation	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_c2109	transcytosis	transport	P	Thyroglobulin (Tg)
ruditapes_c27066	transcytosis	transport	P	Thyroglobulin (Tg)
ruditapes_lrc33451	transcytosis	transport	P	Thyroglobulin (Tg)
ruditapes2_c4395	thyroid hormone metabolic process	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_lrc33451	regulation of myelination	developmental processes	P	Thyroglobulin (Tg)
ruditapes_c2109	thyroid hormone generation	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_lrc33451	thyroid gland development	developmental processes	P	Thyroglobulin (Tg)
ruditapes2_c4395	iodide transport	transport	P	Thyroglobulin (Tg)
ruditapes2_c4395	response to pH	other biological processes	P	Thyroglobulin (Tg)
ruditapes2_c3422	response to lipopolysaccharide	other biological processes	P	Thyroglobulin (Tg)
ruditapes2_c4395	synaptogenesis	developmental processes	P	Thyroglobulin (Tg)
ruditapes2_c4395	synaptogenesis	cell organization and biogenesis	P	Thyroglobulin (Tg)
ruditapes_c27066	thyroid gland development	developmental processes	P	Thyroglobulin (Tg)
ruditapes_c2109	iodide transport	transport	P	Thyroglobulin (Tg)
ruditapes2_c4395	hormone biosynthetic process	other metabolic processes	P	Thyroglobulin (Tg)
ruditapes_c25488	interspecies interaction between organisms	other biological processes	P	Outer capsid protein VP2
ruditapes_s33935	transport	transport	P	C-phycocyanin alpha chain
ruditapes_lrc32498	transport	transport	P	C-phycocyanin alpha chain
ruditapes_s34025	protein-chromophore linkage	protein metabolism	P	C-phycocyanin alpha chain
ruditapes_s33935	photosynthesis	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_lrc32533	transport	transport	P	C-phycocyanin alpha chain
ruditapes2_c5736	transport	transport	P	C-phycocyanin alpha chain
ruditapes2_c5736	photosynthesis	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_lrc33526	protein-chromophore linkage	protein metabolism	P	C-phycocyanin alpha chain
ruditapes_s33935	electron transport chain	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_lrc32498	protein-chromophore linkage	protein metabolism	P	C-phycocyanin alpha chain
ruditapes_s34025	transport	transport	P	C-phycocyanin alpha chain
ruditapes2_c6421	electron transport chain	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_lrc32533	photosynthesis	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_s34025	photosynthesis	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes2_c5736	protein-chromophore linkage	protein metabolism	P	C-phycocyanin alpha chain
ruditapes_lrc32498	electron transport chain	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_lrc33526	electron transport chain	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_s33935	protein-chromophore linkage	protein metabolism	P	C-phycocyanin alpha chain
ruditapes_s34025	electron transport chain	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_lrc32533	electron transport chain	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_lrc32533	protein-chromophore linkage	protein metabolism	P	C-phycocyanin alpha chain
ruditapes2_c5736	electron transport chain	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_lrc33526	transport	transport	P	C-phycocyanin alpha chain
ruditapes2_c6421	protein-chromophore linkage	protein metabolism	P	C-phycocyanin alpha chain
ruditapes_lrc32498	photosynthesis	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_lrc33526	photosynthesis	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes2_c6421	transport	transport	P	C-phycocyanin alpha chain
ruditapes2_c6421	photosynthesis	other metabolic processes	P	C-phycocyanin alpha chain
ruditapes_s37671	positive regulation of cell-matrix adhesion	cell adhesion	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of cell migration	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of odontogenesis of dentine-containing tooth	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	mammary gland fat development	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	regulation of ossification	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	osteoclast differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of cell-matrix adhesion	cell adhesion	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	odontogenesis	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of cellular protein metabolic process	protein metabolism	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of macrophage differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of Ras protein signal transduction	signal transduction	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	inflammatory response	stress response	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	branching involved in mammary gland duct morphogenesis	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of cell proliferation	cell cycle and proliferation	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	innate immune response	stress response	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	homeostasis of number of cells within a tissue	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of multicellular organism growth	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	mammary gland fat development	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of osteoclast differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of odontogenesis of dentine-containing tooth	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of protein kinase activity	other metabolic processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of monocyte differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	reproductive developmental process	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	reproductive developmental process	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	macrophage differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	osteoclast differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of foam cell differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of gene expression	other metabolic processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	regulation of ossification	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of monocyte differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of mononuclear cell proliferation	cell cycle and proliferation	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	ossification	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of mononuclear cell proliferation	cell cycle and proliferation	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	odontogenesis	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of cell migration	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	homeostasis of number of cells within a tissue	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	innate immune response	stress response	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of osteoclast differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	macrophage differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of macrophage differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of gene expression	other metabolic processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of Ras protein signal transduction	signal transduction	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	branching involved in mammary gland duct morphogenesis	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of cell proliferation	cell cycle and proliferation	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of multicellular organism growth	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of foam cell differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	positive regulation of protein kinase activity	other metabolic processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c17994	ossification	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	inflammatory response	stress response	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_s37671	positive regulation of cellular protein metabolic process	protein metabolism	P	Macrophage colony-stimulating factor 1 (CSF-1) (MCSF) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c34045	transport	transport	P	"Cytochrome c1, heme protein, mitochondrial (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1)"
ruditapes_c33312	transport	transport	P	"Cytochrome c1, heme protein, mitochondrial (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1)"
ruditapes_c34045	electron transport chain	other metabolic processes	P	"Cytochrome c1, heme protein, mitochondrial (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1)"
ruditapes_c38248	transport	transport	P	"Cytochrome c1, heme protein, mitochondrial (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1)"
ruditapes_c33312	electron transport chain	other metabolic processes	P	"Cytochrome c1, heme protein, mitochondrial (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1)"
ruditapes_c38248	electron transport chain	other metabolic processes	P	"Cytochrome c1, heme protein, mitochondrial (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1)"
ruditapes2_c38	carbohydrate metabolic process	other metabolic processes	P	Probable maltase H (EC 3.2.1.20) (Larval visceral protein H)
ruditapes2_c38	metabolic process	other metabolic processes	P	Probable maltase H (EC 3.2.1.20) (Larval visceral protein H)
ruditapes_c28626	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Major centromere autoantigen B (Centromere protein B) (CENP-B)
ruditapes_c11036	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (p41)
ruditapes_c11036	deoxyribonucleoside diphosphate metabolic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (p41)
ruditapes_c11036	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (p41)
ruditapes_c12836	imaginal disc-derived wing morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	"transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	establishment of imaginal disc-derived wing hair orientation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	establishment of imaginal disc-derived wing hair orientation	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	negative regulation of compound eye photoreceptor development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	Notch signaling pathway	signal transduction	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	regulation of crystal cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	anterior/posterior pattern formation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	mesoderm development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	cell differentiation	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	ectoderm development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	leg disc morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	lateral inhibition	cell-cell signaling	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	germarium-derived female germ-line cyst encapsulation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	"transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	imaginal disc-derived wing vein specification	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	glial cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	border follicle cell migration	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	regulation of developmental process	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	skeletal muscle tissue development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	negative regulation of JNK cascade	signal transduction	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	negative regulation of JNK cascade	stress response	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	bristle morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	foregut morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	R8 cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	glial cell migration	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	regulation of mitotic cell cycle	cell cycle and proliferation	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	regulation of R8 cell spacing in compound eye	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	R8 cell development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	oocyte anterior/posterior axis specification	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	oocyte anterior/posterior axis specification	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	regulation of cardioblast cell fate specification	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	Notch signaling pathway	signal transduction	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	compound eye retinal cell programmed cell death	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	compound eye retinal cell programmed cell death	death	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	open tracheal system development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	R8 cell fate commitment	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	ovarian follicle cell stalk formation	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	cell fate specification	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	dorsal closure	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	ventral cord development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	imaginal disc-derived wing morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	response to symbiont	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	heterophilic cell adhesion	cell adhesion	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	ovarian follicle cell migration	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	cell adhesion	cell adhesion	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	larval lymph gland hemopoiesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	dorsal appendage formation	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	imaginal disc-derived male genitalia morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	oogenesis	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	larval lymph gland hemopoiesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	germarium-derived egg chamber formation	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	open tracheal system development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	lateral inhibition	cell-cell signaling	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	oocyte localization during germarium-derived egg chamber formation	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	R1/R6 cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	establishment of ommatidial polarity	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	neuron development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	lamellocyte differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	muscle cell fate determination	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	anterior/posterior pattern formation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	R8 cell development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	eye-antennal disc development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	R8 cell fate commitment	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	imaginal disc-derived male genitalia morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	imaginal disc-derived wing margin morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	nervous system development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	establishment of ommatidial polarity	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	actin filament organization	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	oocyte localization during germarium-derived egg chamber formation	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	dorsal closure	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	negative regulation of neurogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	positive regulation of S phase of mitotic cell cycle	cell cycle and proliferation	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	"dorsal/ventral lineage restriction, imaginal disc"	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	asymmetric cell division	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	glial cell fate determination	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	negative regulation of JNK cascade	signal transduction	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	negative regulation of JNK cascade	stress response	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	regulation of growth	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	negative regulation of fusion cell fate specification	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	oogenesis	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	motor axon guidance	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	motor axon guidance	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	lymph gland development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	long-term memory	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	ovarian follicle cell migration	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	axon guidance	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	axon guidance	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	positive regulation of Notch signaling pathway	signal transduction	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	regulation of filopodium assembly	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	compound eye cone cell fate commitment	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	embryonic crystal cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	imaginal disc pattern formation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	peripheral nervous system development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	R7 cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	compound eye morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	R1/R6 cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	germ-line stem cell maintenance	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	regulation of cell differentiation	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	R8 cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	positive regulation of cell proliferation	cell cycle and proliferation	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	ovarian follicle cell development	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	crystal cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	ventral cord development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	imaginal disc-derived wing vein specification	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	"negative regulation of terminal cell fate specification, open tracheal system"	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	second mitotic wave during compound eye morphogenesis	cell cycle and proliferation	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	second mitotic wave during compound eye morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	bristle morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	retinal cell programmed cell death	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	retinal cell programmed cell death	death	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	imaginal disc-derived leg joint morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	embryonic hemopoiesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	oocyte anterior/posterior axis specification	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	oocyte anterior/posterior axis specification	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	axon guidance	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	embryonic hemopoiesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	border follicle cell migration	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	leg disc morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	regulation of crystal cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	sensory organ development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	second mitotic wave during compound eye morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	compound eye morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	anesthesia-resistant memory	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	compound eye retinal cell programmed cell death	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	compound eye retinal cell programmed cell death	death	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	axon guidance	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	dorsal appendage formation	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	retinal cell programmed cell death	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	retinal cell programmed cell death	death	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	"negative regulation of terminal cell fate specification, open tracheal system"	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	response to symbiont	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	second mitotic wave during compound eye morphogenesis	cell cycle and proliferation	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	"dorsal/ventral pattern formation, imaginal disc"	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	glial cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	positive regulation of cell proliferation	cell cycle and proliferation	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	establishment of imaginal disc-derived wing hair orientation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	establishment of imaginal disc-derived wing hair orientation	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	skeletal muscle tissue development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	glial cell migration	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	germarium-derived female germ-line cyst encapsulation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	imaginal disc pattern formation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	peripheral nervous system development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	morphogenesis of follicular epithelium	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	foregut morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	multicellular organismal development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	regulation of neurogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	regulation of filopodium assembly	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	negative regulation of compound eye photoreceptor development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	imaginal disc growth	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	wing disc dorsal/ventral pattern formation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	"epithelial cell type specification, open tracheal system"	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	hemocyte proliferation	cell cycle and proliferation	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	hemocyte proliferation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	imaginal disc-derived leg joint morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	sensory organ development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	glial cell fate determination	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	embryonic crystal cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	lymph gland crystal cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	compound eye development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	regulation of R8 cell spacing in compound eye	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	ovarian follicle cell stalk formation	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	compound eye cone cell fate commitment	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	R3/R4 cell fate commitment	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	R3/R4 cell fate commitment	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	regulation of cardioblast cell fate specification	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	eye-antennal disc development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	positive regulation of S phase of mitotic cell cycle	cell cycle and proliferation	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	crystal cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	positive regulation of Notch signaling pathway	signal transduction	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	nervous system development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	stem cell differentiation	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	wing disc proximal/distal pattern formation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	regulation of cell differentiation	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	lamellocyte differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	lymph gland development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	regulation of neurogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	muscle cell fate determination	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	germarium-derived egg chamber formation	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	imaginal disc-derived wing margin morphogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	compound eye development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	negative regulation of fusion cell fate specification	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	stem cell differentiation	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	regulation of growth	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	R7 cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	"dorsal/ventral lineage restriction, imaginal disc"	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	neuron development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	negative regulation of neurogenesis	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	long-term memory	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	actin filament organization	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	multicellular organismal development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	cell fate specification	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	lymph gland crystal cell differentiation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	germ-line stem cell maintenance	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	"epithelial cell type specification, open tracheal system"	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	ovarian follicle cell development	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	mesoderm development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	establishment of ommatidial polarity	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	establishment of ommatidial polarity	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	R3/R4 cell fate commitment	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	R3/R4 cell fate commitment	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	heterophilic cell adhesion	cell adhesion	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	wing disc proximal/distal pattern formation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	"dorsal/ventral pattern formation, imaginal disc"	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	imaginal disc growth	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	wing disc dorsal/ventral pattern formation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	anesthesia-resistant memory	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	morphogenesis of follicular epithelium	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	hemocyte proliferation	cell cycle and proliferation	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	hemocyte proliferation	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	ectoderm development	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	cell adhesion	cell adhesion	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	cell differentiation	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	motor axon guidance	developmental processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c22470	motor axon guidance	cell organization and biogenesis	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	regulation of developmental process	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	regulation of mitotic cell cycle	cell cycle and proliferation	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_c12836	asymmetric cell division	other biological processes	P	Neurogenic locus Notch protein [Cleaved into: Processed neurogenic locus Notch protein]
ruditapes_s39067	transcription termination	RNA metabolism	P	Probable regulatory protein N
ruditapes_s39067	transcription termination	cell organization and biogenesis	P	Probable regulatory protein N
ruditapes_s39067	"transcription, DNA-dependent"	RNA metabolism	P	Probable regulatory protein N
ruditapes_s39067	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable regulatory protein N
ruditapes_c20810	establishment or maintenance of chromatin architecture during transcription	cell organization and biogenesis	P	Regulatory protein ADR1
ruditapes_c23810	negative regulation of chromatin silencing	RNA metabolism	P	Regulatory protein ADR1
ruditapes_c23810	negative regulation of chromatin silencing	cell organization and biogenesis	P	Regulatory protein ADR1
ruditapes_c20810	positive regulation of fatty acid beta-oxidation	other metabolic processes	P	Regulatory protein ADR1
ruditapes_c20810	"transcription, DNA-dependent"	RNA metabolism	P	Regulatory protein ADR1
ruditapes_c20810	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	Regulatory protein ADR1
ruditapes_c20810	ethanol catabolic process	other metabolic processes	P	Regulatory protein ADR1
ruditapes_c20810	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Regulatory protein ADR1
ruditapes_c23810	peroxisome organization	cell organization and biogenesis	P	Regulatory protein ADR1
ruditapes_c20810	peroxisome organization	cell organization and biogenesis	P	Regulatory protein ADR1
ruditapes_c23810	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Regulatory protein ADR1
ruditapes_c20810	negative regulation of chromatin silencing	cell organization and biogenesis	P	Regulatory protein ADR1
ruditapes_c23810	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	Regulatory protein ADR1
ruditapes_c20810	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Regulatory protein ADR1
ruditapes_c23810	"transcription, DNA-dependent"	RNA metabolism	P	Regulatory protein ADR1
ruditapes_c23810	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Regulatory protein ADR1
ruditapes_c23810	positive regulation of fatty acid beta-oxidation	other metabolic processes	P	Regulatory protein ADR1
ruditapes_c23810	establishment or maintenance of chromatin architecture during transcription	cell organization and biogenesis	P	Regulatory protein ADR1
ruditapes_c23810	ethanol catabolic process	other metabolic processes	P	Regulatory protein ADR1
ruditapes_c20810	negative regulation of chromatin silencing	RNA metabolism	P	Regulatory protein ADR1
ruditapes_c21707	protein amino acid N-linked glycosylation	protein metabolism	P	UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC 2.7.8.15) (GlcNAc-1-P transferase) (G1PT) (GPT) (N-acetylglucosamine-1-phosphate transferase) (Tunicamycin resistance protein 1)
ruditapes_c21707	aerobic respiration	other metabolic processes	P	UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC 2.7.8.15) (GlcNAc-1-P transferase) (G1PT) (GPT) (N-acetylglucosamine-1-phosphate transferase) (Tunicamycin resistance protein 1)
ruditapes2_c6727	regulation of protein stability	protein metabolism	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (C-type lectin domain family 4 member H2) (Hepatic lectin H2) (HL-2)
ruditapes2_c6727	lipid homeostasis	other biological processes	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (C-type lectin domain family 4 member H2) (Hepatic lectin H2) (HL-2)
ruditapes2_c6727	glycoprotein metabolic process	other metabolic processes	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (C-type lectin domain family 4 member H2) (Hepatic lectin H2) (HL-2)
ruditapes2_c6727	endocytosis	transport	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (C-type lectin domain family 4 member H2) (Hepatic lectin H2) (HL-2)
ruditapes2_c6727	endocytosis	cell organization and biogenesis	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (C-type lectin domain family 4 member H2) (Hepatic lectin H2) (HL-2)
ruditapes2_c6727	bone mineralization	developmental processes	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (C-type lectin domain family 4 member H2) (Hepatic lectin H2) (HL-2)
ruditapes2_c6727	cell surface receptor linked signal transduction	signal transduction	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (C-type lectin domain family 4 member H2) (Hepatic lectin H2) (HL-2)
ruditapes_c21626	oxidation reduction	other metabolic processes	P	Acyl-CoA desaturase 1 (EC 1.14.19.1) (Delta(9)-desaturase 1) (Delta-9 desaturase 1) (Fatty acid desaturase 1) (Stearoyl-CoA desaturase 1)
ruditapes_c21626	lipid biosynthetic process	other metabolic processes	P	Acyl-CoA desaturase 1 (EC 1.14.19.1) (Delta(9)-desaturase 1) (Delta-9 desaturase 1) (Fatty acid desaturase 1) (Stearoyl-CoA desaturase 1)
ruditapes_c21626	lipid metabolic process	other metabolic processes	P	Acyl-CoA desaturase 1 (EC 1.14.19.1) (Delta(9)-desaturase 1) (Delta-9 desaturase 1) (Fatty acid desaturase 1) (Stearoyl-CoA desaturase 1)
ruditapes_c21626	fatty acid biosynthetic process	other metabolic processes	P	Acyl-CoA desaturase 1 (EC 1.14.19.1) (Delta(9)-desaturase 1) (Delta-9 desaturase 1) (Fatty acid desaturase 1) (Stearoyl-CoA desaturase 1)
ruditapes_lrc38023	response to toxin	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc38023	protein catabolic process	protein metabolism	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc38023	response to cytokine stimulus	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc38023	response to food	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc38023	proteolysis	protein metabolism	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc38023	response to nutrient	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc38023	positive regulation of apoptosis	death	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc38023	response to peptide hormone stimulus	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc38023	digestion	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_s36552	glycolysis	other metabolic processes	P	"Phosphoglycerate kinase, glycosomal (Phosphoglycerate kinase C) (EC 2.7.2.3)"
ruditapes_s36552	phosphorylation	other metabolic processes	P	"Phosphoglycerate kinase, glycosomal (Phosphoglycerate kinase C) (EC 2.7.2.3)"
ruditapes_c19090	nucleotide biosynthetic process	other metabolic processes	P	Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)]
ruditapes_c19090	oxidation reduction	other metabolic processes	P	Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)]
ruditapes_c19090	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)]
ruditapes_c19090	dTMP biosynthetic process	other metabolic processes	P	Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)]
ruditapes_c19090	glycine biosynthetic process	other metabolic processes	P	Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)]
ruditapes_c19090	methylation	other metabolic processes	P	Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)]
ruditapes_c19090	metabolic process	other metabolic processes	P	Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)]
ruditapes_s40263	interspecies interaction between organisms	other biological processes	P	Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); Glycoprotein G1 (GP1); Glycoprotein G2 (GP2)]
ruditapes_c11269	transport	transport	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_c11269	response to drug	other biological processes	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_c11269	fatty acid metabolic process	other metabolic processes	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_c11269	response to insulin stimulus	other biological processes	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_c11269	fatty acid beta-oxidation	other metabolic processes	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_c11269	phosphatidylcholine biosynthetic process	other metabolic processes	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_c11269	long-chain fatty acid transport	transport	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_c11269	response to fatty acid	other biological processes	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_c19756	proteolysis	protein metabolism	P	Serine carboxypeptidase 1 (EC 3.4.16.5) (CP-MI) (Carboxypeptidase C) (Serine carboxypeptidase I) [Cleaved into: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carboxypeptidase I chain B)]
ruditapes_c26987	activation of adenylate cyclase activity	other metabolic processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	heat generation	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	diaphragm contraction	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	receptor-mediated endocytosis	transport	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	receptor-mediated endocytosis	cell organization and biogenesis	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	"synaptic transmission, glutamatergic"	cell-cell signaling	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	regulation of systemic arterial blood pressure by norepinephrine-epinephrine	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of apoptosis	death	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of MAPKKK cascade	signal transduction	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of the force of heart contraction by epinephrine	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of sodium ion transport	transport	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	regulation of excitatory postsynaptic membrane potential	cell-cell signaling	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	brown fat cell differentiation	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	regulation of sensory perception of pain	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of skeletal muscle growth	developmental processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	negative regulation of multicellular organism growth	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	endosome to lysosome transport	transport	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	signal transduction	signal transduction	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	diet induced thermogenesis	other metabolic processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	bone resorption	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	regulation of sodium ion transport	transport	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of potassium ion transport	transport	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	wound healing	stress response	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	negative regulation of ossification	developmental processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	"G-protein signaling, coupled to cAMP nucleotide second messenger"	signal transduction	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	negative regulation of smooth muscle contraction	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	response to cold	stress response	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	negative regulation of inflammatory response	stress response	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	vasodilation by norepinephrine-epinephrine involved in regulation of systemic arterial blood pressure	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of bone mineralization	developmental processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	activation of transmembrane receptor protein tyrosine kinase activity	other metabolic processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	activation of transmembrane receptor protein tyrosine kinase activity	cell organization and biogenesis	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of vasodilation	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of heart contraction	other biological processes	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	desensitization of G-protein coupled receptor protein signaling pathway by arrestin	signal transduction	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	cell surface receptor linked signal transduction	signal transduction	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	positive regulation of cell proliferation	cell cycle and proliferation	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	negative regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	G-protein coupled receptor protein signaling pathway	signal transduction	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c26987	activation of transmembrane receptor protein tyrosine kinase activity	signal transduction	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_lrc32199	transport	transport	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes_c2270	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes_c2270	transport	transport	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes_lrc32199	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes_c10837	proteolysis	protein metabolism	P	Astacin (EC 3.4.24.21) (Crayfish small molecule proteinase)
ruditapes2_c1954	platelet degranulation	transport	P	Proactivator polypeptide [Cleaved into: Saposin-A (Protein A); Saposin-B-Val; Saposin-B (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sphingolipid activator protein 1) (SAP-1) (Sulfatide/GM1 activator); Saposin-C (A1 activator) (Co-beta-glucosidase) (Glucosylceramidase activator) (Sphingolipid activator protein 2) (SAP-2); Saposin-D (Component C) (Protein C)]
ruditapes2_c1954	glycosphingolipid metabolic process	other metabolic processes	P	Proactivator polypeptide [Cleaved into: Saposin-A (Protein A); Saposin-B-Val; Saposin-B (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sphingolipid activator protein 1) (SAP-1) (Sulfatide/GM1 activator); Saposin-C (A1 activator) (Co-beta-glucosidase) (Glucosylceramidase activator) (Sphingolipid activator protein 2) (SAP-2); Saposin-D (Component C) (Protein C)]
ruditapes2_c1954	blood coagulation	stress response	P	Proactivator polypeptide [Cleaved into: Saposin-A (Protein A); Saposin-B-Val; Saposin-B (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sphingolipid activator protein 1) (SAP-1) (Sulfatide/GM1 activator); Saposin-C (A1 activator) (Co-beta-glucosidase) (Glucosylceramidase activator) (Sphingolipid activator protein 2) (SAP-2); Saposin-D (Component C) (Protein C)]
ruditapes2_c1954	lipid transport	transport	P	Proactivator polypeptide [Cleaved into: Saposin-A (Protein A); Saposin-B-Val; Saposin-B (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sphingolipid activator protein 1) (SAP-1) (Sulfatide/GM1 activator); Saposin-C (A1 activator) (Co-beta-glucosidase) (Glucosylceramidase activator) (Sphingolipid activator protein 2) (SAP-2); Saposin-D (Component C) (Protein C)]
ruditapes2_c1954	platelet activation	stress response	P	Proactivator polypeptide [Cleaved into: Saposin-A (Protein A); Saposin-B-Val; Saposin-B (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sphingolipid activator protein 1) (SAP-1) (Sulfatide/GM1 activator); Saposin-C (A1 activator) (Co-beta-glucosidase) (Glucosylceramidase activator) (Sphingolipid activator protein 2) (SAP-2); Saposin-D (Component C) (Protein C)]
ruditapes2_c1954	positive regulation of catalytic activity	other biological processes	P	Proactivator polypeptide [Cleaved into: Saposin-A (Protein A); Saposin-B-Val; Saposin-B (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sphingolipid activator protein 1) (SAP-1) (Sulfatide/GM1 activator); Saposin-C (A1 activator) (Co-beta-glucosidase) (Glucosylceramidase activator) (Sphingolipid activator protein 2) (SAP-2); Saposin-D (Component C) (Protein C)]
ruditapes2_c1954	sphingolipid metabolic process	other metabolic processes	P	Proactivator polypeptide [Cleaved into: Saposin-A (Protein A); Saposin-B-Val; Saposin-B (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sphingolipid activator protein 1) (SAP-1) (Sulfatide/GM1 activator); Saposin-C (A1 activator) (Co-beta-glucosidase) (Glucosylceramidase activator) (Sphingolipid activator protein 2) (SAP-2); Saposin-D (Component C) (Protein C)]
ruditapes2_c1954	lipid metabolic process	other metabolic processes	P	Proactivator polypeptide [Cleaved into: Saposin-A (Protein A); Saposin-B-Val; Saposin-B (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sphingolipid activator protein 1) (SAP-1) (Sulfatide/GM1 activator); Saposin-C (A1 activator) (Co-beta-glucosidase) (Glucosylceramidase activator) (Sphingolipid activator protein 2) (SAP-2); Saposin-D (Component C) (Protein C)]
ruditapes_c5704	response to oxidative stress	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	heart contraction	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	embryo implantation	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	double-strand break repair	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	negative regulation of neuron apoptosis	death	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	response to superoxide	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	positive regulation of catalytic activity	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	neurofilament cytoskeleton organization	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	superoxide anion generation	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	regulation of multicellular organism growth	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	muscle maintenance	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	activation of MAPK activity	protein metabolism	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	cellular iron ion homeostasis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	response to amphetamine	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	hydrogen peroxide biosynthetic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	spermatogenesis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	response to copper ion	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	regulation of protein kinase activity	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	response to hydrogen peroxide	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	activation of MAPK activity	signal transduction	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	myeloid cell homeostasis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	response to axon injury	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	response to drug	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	regulation of mitochondrial membrane potential	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	negative regulation of cholesterol biosynthetic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	negative regulation of apoptosis	death	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	DNA fragmentation involved in apoptosis	DNA metabolism	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	DNA fragmentation involved in apoptosis	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	DNA fragmentation involved in apoptosis	death	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	cell aging	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	locomotory behavior	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	removal of superoxide radicals	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	transmission of nerve impulse	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	ovarian follicle development	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	sensory perception of sound	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	response to reactive oxygen species	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	superoxide metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	oxidation reduction	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	response to ethanol	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	anti-apoptosis	death	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	response to organic substance	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	myelin maintenance in the peripheral nervous system	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	myelin maintenance in the peripheral nervous system	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	response to heat	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	positive regulation of cytokine production	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	relaxation of vascular smooth muscle	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	auditory receptor cell stereocilium organization	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	auditory receptor cell stereocilium organization	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	glutathione metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	retina homeostasis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	response to nutrient levels	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	double-strand break repair	DNA metabolism	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	regulation of blood pressure	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c5704	aging	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c33273	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c33273	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c33273	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c33273	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c2428	carbohydrate metabolic process	other metabolic processes	P	"Glucoamylase 1 (Gluc 1) (EC 3.2.1.3) (1,4-alpha-D-glucan glucohydrolase) (Glucan 1,4-alpha-glucosidase) [Cleaved into: Glucoamylase 2 (Gluc 2); Glucoamylase 3 (Gluc 3)]"
ruditapes_c2428	polysaccharide catabolic process	other metabolic processes	P	"Glucoamylase 1 (Gluc 1) (EC 3.2.1.3) (1,4-alpha-D-glucan glucohydrolase) (Glucan 1,4-alpha-glucosidase) [Cleaved into: Glucoamylase 2 (Gluc 2); Glucoamylase 3 (Gluc 3)]"
ruditapes_c2428	polysaccharide metabolic process	other metabolic processes	P	"Glucoamylase 1 (Gluc 1) (EC 3.2.1.3) (1,4-alpha-D-glucan glucohydrolase) (Glucan 1,4-alpha-glucosidase) [Cleaved into: Glucoamylase 2 (Gluc 2); Glucoamylase 3 (Gluc 3)]"
ruditapes_c2428	metabolic process	other metabolic processes	P	"Glucoamylase 1 (Gluc 1) (EC 3.2.1.3) (1,4-alpha-D-glucan glucohydrolase) (Glucan 1,4-alpha-glucosidase) [Cleaved into: Glucoamylase 2 (Gluc 2); Glucoamylase 3 (Gluc 3)]"
ruditapes_c8426	oligosaccharide catabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	glycosphingolipid metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	cellular calcium ion homeostasis	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	ganglioside catabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	oogenesis	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	cellular calcium ion homeostasis	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	neuromuscular process	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	cellular protein metabolic process	protein metabolism	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	penetration of zona pellucida	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	sexual reproduction	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	myelination	developmental processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	lysosome organization	cell organization and biogenesis	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	lysosome organization	cell organization and biogenesis	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	sensory perception of sound	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	sexual reproduction	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	neuromuscular process controlling balance	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	oogenesis	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	regulation of cellular metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	cell death	death	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	oligosaccharide catabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	locomotory behavior	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	phospholipid biosynthetic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	ganglioside catabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	glycosaminoglycan metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	carbohydrate metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	glycosphingolipid metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	sensory perception of sound	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	N-acetylglucosamine metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	penetration of zona pellucida	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	cellular protein metabolic process	protein metabolism	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	single fertilization	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	locomotory behavior	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	lipid storage	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	carbohydrate metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	neuromuscular process	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	phospholipid biosynthetic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	cell death	death	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	male courtship behavior	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	skeletal system development	developmental processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	myelination	developmental processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	lipid storage	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	N-acetylglucosamine metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	sphingolipid metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	sphingolipid metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	male courtship behavior	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	neuromuscular process controlling balance	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	regulation of cellular metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	single fertilization	other biological processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8426	glycosaminoglycan metabolic process	other metabolic processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes_c8084	skeletal system development	developmental processes	P	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]
ruditapes2_c603	proteolysis	protein metabolism	P	Cathepsin B (EC 3.4.22.1) (BCSB) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c3048	proteolysis	protein metabolism	P	Cathepsin B (EC 3.4.22.1) (BCSB) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes_c9171	proteolysis	protein metabolism	P	Cathepsin B (EC 3.4.22.1) (BCSB) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c3048	regulation of catalytic activity	other biological processes	P	Cathepsin B (EC 3.4.22.1) (BCSB) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes_c1819	proteolysis	protein metabolism	P	Cathepsin B (EC 3.4.22.1) (BCSB) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes_c9171	regulation of catalytic activity	other biological processes	P	Cathepsin B (EC 3.4.22.1) (BCSB) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes2_c603	regulation of catalytic activity	other biological processes	P	Cathepsin B (EC 3.4.22.1) (BCSB) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes_c1819	regulation of catalytic activity	other biological processes	P	Cathepsin B (EC 3.4.22.1) (BCSB) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]
ruditapes_c20409	oxidation reduction	other metabolic processes	P	Alkanal monooxygenase alpha chain (EC 1.14.14.3) (Bacterial luciferase alpha chain)
ruditapes_c20409	bioluminescence	other metabolic processes	P	Alkanal monooxygenase alpha chain (EC 1.14.14.3) (Bacterial luciferase alpha chain)
ruditapes2_c1588	actin filament capping	protein metabolism	P	"Spectrin alpha chain, non-erythrocytic 1 (Alpha-II spectrin) (Fodrin alpha chain)"
ruditapes2_c1588	actin filament capping	cell organization and biogenesis	P	"Spectrin alpha chain, non-erythrocytic 1 (Alpha-II spectrin) (Fodrin alpha chain)"
ruditapes2_lrc2654	aromatic compound catabolic process	other metabolic processes	P	Uncharacterized protein ACIAD1443 (ORF1)
ruditapes_c11090	transport	transport	P	Coenzyme PQQ synthesis protein B (Coenzyme PQQ synthesis protein V) (Pyrroloquinoline quinone biosynthesis protein B)
ruditapes_c11090	pyrroloquinoline quinone biosynthetic process	protein metabolism	P	Coenzyme PQQ synthesis protein B (Coenzyme PQQ synthesis protein V) (Pyrroloquinoline quinone biosynthesis protein B)
ruditapes_c27335	proteolysis	protein metabolism	P	Uncharacterized protein in PQQ-III 3'region (ORF R) (Fragment)
ruditapes_c14707	oxidation reduction	other metabolic processes	P	"Ferritin, lower subunit (Ferritin L)"
ruditapes_c14707	cellular iron ion homeostasis	other biological processes	P	"Ferritin, lower subunit (Ferritin L)"
ruditapes_c14707	iron ion transport	transport	P	"Ferritin, lower subunit (Ferritin L)"
ruditapes_c9111	mitotic chromosome condensation	cell cycle and proliferation	P	DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)
ruditapes_c9111	mitotic chromosome condensation	cell organization and biogenesis	P	DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)
ruditapes_c9111	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)
ruditapes_c9111	DNA topological change	DNA metabolism	P	DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)
ruditapes_c9111	chromatin assembly or disassembly	cell organization and biogenesis	P	DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)
ruditapes_c9111	transcription of nuclear rRNA large RNA polymerase I transcript	RNA metabolism	P	DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)
ruditapes_c21001	cell morphogenesis	cell organization and biogenesis	P	Actin-18 (Actin-3-sub 2)
ruditapes_lrc28223	cell morphogenesis	cell organization and biogenesis	P	Actin-3 (Actin-3-sub 1)
ruditapes_lrc28223	phagocytosis	transport	P	Actin-3 (Actin-3-sub 1)
ruditapes_lrc28223	phagocytosis	cell organization and biogenesis	P	Actin-3 (Actin-3-sub 1)
ruditapes_c9771	beta-amyloid metabolic process	other metabolic processes	P	Neprilysin (EC 3.4.24.11) (Atriopeptidase) (Enkephalinase) (Neutral endopeptidase 24.11) (NEP) (Neutral endopeptidase) (Skin fibroblast elastase) (SFE) (CD antigen CD10)
ruditapes_c9771	proteolysis	protein metabolism	P	Neprilysin (EC 3.4.24.11) (Atriopeptidase) (Enkephalinase) (Neutral endopeptidase 24.11) (NEP) (Neutral endopeptidase) (Skin fibroblast elastase) (SFE) (CD antigen CD10)
ruditapes_c9771	peptide metabolic process	other metabolic processes	P	Neprilysin (EC 3.4.24.11) (Atriopeptidase) (Enkephalinase) (Neutral endopeptidase 24.11) (NEP) (Neutral endopeptidase) (Skin fibroblast elastase) (SFE) (CD antigen CD10)
ruditapes_c24329	fatty acid metabolic process	other metabolic processes	P	"3-ketoacyl-CoA thiolase B, peroxisomal (EC 2.3.1.16) (Acetyl-CoA acyltransferase B) (Beta-ketothiolase B) (Peroxisomal 3-oxoacyl-CoA thiolase B)"
ruditapes_c24329	metabolic process	other metabolic processes	P	"3-ketoacyl-CoA thiolase B, peroxisomal (EC 2.3.1.16) (Acetyl-CoA acyltransferase B) (Beta-ketothiolase B) (Peroxisomal 3-oxoacyl-CoA thiolase B)"
ruditapes_c24329	lipid metabolic process	other metabolic processes	P	"3-ketoacyl-CoA thiolase B, peroxisomal (EC 2.3.1.16) (Acetyl-CoA acyltransferase B) (Beta-ketothiolase B) (Peroxisomal 3-oxoacyl-CoA thiolase B)"
ruditapes_c15432	post-embryonic development	developmental processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	hemopoiesis	developmental processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	age-dependent response to reactive oxygen species	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to hypoxia	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to silicon dioxide	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to manganese ion	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to superoxide	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	hydrogen peroxide biosynthetic process	other metabolic processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	neuron development	developmental processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	hydrogen peroxide metabolic process	other metabolic processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	release of cytochrome c from mitochondria	cell organization and biogenesis	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	release of cytochrome c from mitochondria	death	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	liver development	developmental processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	negative regulation of fat cell differentiation	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to electrical stimulus	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	vasodilation	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	detection of oxygen	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	superoxide anion generation	other metabolic processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	negative regulation of apoptosis	death	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	protein homooligomerization	cell organization and biogenesis	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	regulation of mitochondrial membrane potential	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to drug	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	mitochondrion organization	cell organization and biogenesis	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	removal of superoxide radicals	other metabolic processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to reactive oxygen species	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	regulation of catalytic activity	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	iron ion homeostasis	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to zinc ion	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	superoxide metabolic process	other metabolic processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to axon injury	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	oxidation reduction	other metabolic processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to hydrogen peroxide	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	heart development	developmental processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to selenium ion	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to stress	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	anti-apoptosis	death	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	age-dependent response to oxidative stress	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	regulation of blood pressure	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	locomotory behavior	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to activity	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to lipopolysaccharide	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to hyperoxia	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	erythrophore differentiation	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	vasodilation by acetylcholine involved in regulation of systemic arterial blood pressure	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to cadmium ion	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	respiratory electron transport chain	other metabolic processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to gamma radiation	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	glutathione metabolic process	other metabolic processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to nutrient levels	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	aging	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to L-ascorbic acid	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	apoptosis	death	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c15432	response to oxidative stress	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes2_lrc3162	cell adhesion	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c26513	cell adhesion	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c12215	carbohydrate metabolic process	other metabolic processes	P	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)
ruditapes_c12215	galactose catabolic process	other metabolic processes	P	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)
ruditapes_c12215	galactose metabolic process	other metabolic processes	P	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)
ruditapes_c12215	UDP-glucose catabolic process	other metabolic processes	P	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)
ruditapes_c12215	metabolic process	other metabolic processes	P	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)
ruditapes_c11088	"regulation of alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) (PEN repeat clone P9) (hnRNP core protein A1-A)
ruditapes_c11088	negative regulation of RNA splicing	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) (PEN repeat clone P9) (hnRNP core protein A1-A)
ruditapes_c14166	negative regulation of cell proliferation	cell cycle and proliferation	P	"Uromodulin (Tamm-Horsfall urinary glycoprotein) (THP) [Cleaved into: Uromodulin, secreted form]"
ruditapes_c14166	excretion	transport	P	"Uromodulin (Tamm-Horsfall urinary glycoprotein) (THP) [Cleaved into: Uromodulin, secreted form]"
ruditapes_c14166	cellular defense response	stress response	P	"Uromodulin (Tamm-Horsfall urinary glycoprotein) (THP) [Cleaved into: Uromodulin, secreted form]"
ruditapes_c14166	chemical homeostasis	other biological processes	P	"Uromodulin (Tamm-Horsfall urinary glycoprotein) (THP) [Cleaved into: Uromodulin, secreted form]"
ruditapes_c14166	response to organic substance	other biological processes	P	"Uromodulin (Tamm-Horsfall urinary glycoprotein) (THP) [Cleaved into: Uromodulin, secreted form]"
ruditapes2_lrc5263	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc6051	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s40425	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3885	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34614	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37116	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5170	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36722	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34103	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc33806	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36722	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37850	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s40425	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32955	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s40425	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37116	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3885	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32955	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34742	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5296	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc39082	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc11227	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc38811	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc6051	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3426	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5296	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5170	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s40425	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s35780	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc6051	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc11227	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32955	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5170	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc39082	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34988	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc6051	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3885	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3426	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc35068	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34614	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34742	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36722	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37850	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc11227	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34237	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32955	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32397	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34742	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37116	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36722	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5170	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc6051	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5263	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36512	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3426	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32397	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37116	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc35068	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3885	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5263	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34237	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32397	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc33806	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34237	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc38811	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc38811	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34103	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3885	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc35068	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34742	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37850	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34988	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34237	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc39082	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s38898	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5263	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc35068	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32397	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s38898	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc6051	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s35780	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34988	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc39082	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3426	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc33806	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s35780	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s38898	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s40425	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34614	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc33806	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc35068	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc11227	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5263	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37850	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32397	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34103	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34988	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s35780	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s38898	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc6051	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34237	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34614	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5296	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5263	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36512	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32955	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34614	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc39082	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s38898	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36722	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37116	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34237	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc11227	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc39082	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5296	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34103	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5170	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s35780	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36722	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32955	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc33806	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34614	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5296	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37850	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32397	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3885	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5263	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc38811	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc39082	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3885	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34614	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3426	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5296	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34988	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3885	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36512	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5296	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36722	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s40425	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36512	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37116	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s35780	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34742	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34988	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s35780	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34988	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc38811	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc39082	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36512	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34237	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc35068	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34103	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36512	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5296	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34988	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc38811	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36722	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37116	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36512	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34742	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32397	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s38898	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32955	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32955	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34103	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s38898	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc35068	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5170	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s38898	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3426	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc38811	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc33806	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc33806	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34742	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37850	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36512	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3426	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc3426	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc11227	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34237	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc6051	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34103	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc38811	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5170	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34742	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5263	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc32397	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc11227	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc11227	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34614	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34103	oxidative phosphorylation	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s40425	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s40425	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37850	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37850	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes2_lrc5170	respiratory electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc35068	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc33806	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc37116	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s35780	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc34191	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4473	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32547	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4473	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5332	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32547	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc34191	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32547	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5332	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4473	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5332	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32547	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4473	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5332	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5332	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5332	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc34191	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc34191	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32547	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4473	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4473	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc34191	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc34191	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32547	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P2) (ATPase protein 9) (ATPase subunit c)"
ruditapes_c10160	negative regulation of cell-matrix adhesion	cell adhesion	P	Thrombospondin-1
ruditapes_c10160	chronic inflammatory response	stress response	P	Thrombospondin-1
ruditapes_c10160	positive regulation of phosphorylation	other metabolic processes	P	Thrombospondin-1
ruditapes_lrc18819	cell adhesion	cell adhesion	P	Thrombospondin-1
ruditapes_lrc18819	induction of apoptosis	death	P	Thrombospondin-1
ruditapes_c10160	negative regulation of interleukin-12 production	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of nitric oxide mediated signal transduction	signal transduction	P	Thrombospondin-1
ruditapes_c10160	response to glucose stimulus	other biological processes	P	Thrombospondin-1
ruditapes_c10160	sprouting angiogenesis	developmental processes	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of cGMP-mediated signaling	signal transduction	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of chemotaxis	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	chronic inflammatory response	stress response	P	Thrombospondin-1
ruditapes_c10160	anti-apoptosis	death	P	Thrombospondin-1
ruditapes_c10160	negative regulation of fibrinolysis	stress response	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of fibroblast migration	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of transforming growth factor-beta1 production	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of dendritic cell antigen processing and presentation	other biological processes	P	Thrombospondin-1
ruditapes_c10160	engulfment of apoptotic cell	cell organization and biogenesis	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of angiogenesis	developmental processes	P	Thrombospondin-1
ruditapes_c10160	negative regulation of angiogenesis	developmental processes	P	Thrombospondin-1
ruditapes_c10160	positive regulation of transforming growth factor-beta1 production	other biological processes	P	Thrombospondin-1
ruditapes_c10160	platelet activation	stress response	P	Thrombospondin-1
ruditapes_c10160	positive regulation of macrophage chemotaxis	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	platelet activation	stress response	P	Thrombospondin-1
ruditapes_lrc18819	immune response	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II	other biological processes	P	Thrombospondin-1
ruditapes_c10160	negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II	other biological processes	P	Thrombospondin-1
ruditapes_c10160	engulfment of apoptotic cell	transport	P	Thrombospondin-1
ruditapes_lrc18819	response to drug	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of fibrinolysis	stress response	P	Thrombospondin-1
ruditapes_c10160	immune response	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of blood vessel endothelial cell migration	other biological processes	P	Thrombospondin-1
ruditapes_c10160	negative regulation of plasminogen activation	protein metabolism	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of interleukin-12 production	other biological processes	P	Thrombospondin-1
ruditapes_c10160	positive regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	Thrombospondin-1
ruditapes_c10160	platelet degranulation	transport	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of phosphorylation	other metabolic processes	P	Thrombospondin-1
ruditapes_lrc18819	response to calcium ion	other biological processes	P	Thrombospondin-1
ruditapes_c10160	positive regulation of protein kinase B signaling cascade	signal transduction	P	Thrombospondin-1
ruditapes_lrc18819	response to glucose stimulus	other biological processes	P	Thrombospondin-1
ruditapes_c10160	cell migration	other biological processes	P	Thrombospondin-1
ruditapes_c10160	response to magnesium ion	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	anti-apoptosis	death	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of macrophage chemotaxis	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	engulfment of apoptotic cell	transport	P	Thrombospondin-1
ruditapes_lrc18819	engulfment of apoptotic cell	cell organization and biogenesis	P	Thrombospondin-1
ruditapes_lrc18819	cell migration	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	sprouting angiogenesis	developmental processes	P	Thrombospondin-1
ruditapes_lrc18819	cell cycle arrest	cell cycle and proliferation	P	Thrombospondin-1
ruditapes_lrc18819	activation of MAPK activity	signal transduction	P	Thrombospondin-1
ruditapes_lrc18819	activation of MAPK activity	protein metabolism	P	Thrombospondin-1
ruditapes_c10160	positive regulation of translation	protein metabolism	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of protein kinase B signaling cascade	signal transduction	P	Thrombospondin-1
ruditapes_c10160	response to calcium ion	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	Thrombospondin-1
ruditapes_c10160	negative regulation of apoptosis	death	P	Thrombospondin-1
ruditapes_c10160	positive regulation of macrophage activation	other biological processes	P	Thrombospondin-1
ruditapes_c10160	positive regulation of tumor necrosis factor biosynthetic process	other metabolic processes	P	Thrombospondin-1
ruditapes_lrc18819	inflammatory response	stress response	P	Thrombospondin-1
ruditapes_c10160	cell cycle arrest	cell cycle and proliferation	P	Thrombospondin-1
ruditapes_c10160	positive regulation of cell-substrate adhesion	cell adhesion	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of angiogenesis	developmental processes	P	Thrombospondin-1
ruditapes_c10160	positive regulation of cell migration	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of plasminogen activation	protein metabolism	P	Thrombospondin-1
ruditapes_lrc18819	platelet degranulation	transport	P	Thrombospondin-1
ruditapes_c10160	positive regulation of blood vessel endothelial cell migration	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of apoptosis	death	P	Thrombospondin-1
ruditapes_c10160	induction of apoptosis	death	P	Thrombospondin-1
ruditapes_c10160	positive regulation of angiogenesis	developmental processes	P	Thrombospondin-1
ruditapes_c10160	blood coagulation	stress response	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of blood vessel endothelial cell migration	other biological processes	P	Thrombospondin-1
ruditapes_c10160	activation of MAPK activity	protein metabolism	P	Thrombospondin-1
ruditapes_lrc18819	peptide cross-linking	protein metabolism	P	Thrombospondin-1
ruditapes_c10160	positive regulation of endothelial cell migration	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of endothelial cell migration	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of macrophage activation	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of tumor necrosis factor biosynthetic process	other metabolic processes	P	Thrombospondin-1
ruditapes_c10160	negative regulation of plasma membrane long-chain fatty acid transport	transport	P	Thrombospondin-1
ruditapes_c10160	negative regulation of endothelial cell migration	other biological processes	P	Thrombospondin-1
ruditapes_c10160	cell adhesion	cell adhesion	P	Thrombospondin-1
ruditapes_lrc18819	cellular response to heat	stress response	P	Thrombospondin-1
ruditapes_c10160	response to hypoxia	stress response	P	Thrombospondin-1
ruditapes_c10160	activation of MAPK activity	signal transduction	P	Thrombospondin-1
ruditapes_lrc18819	response to progesterone stimulus	other biological processes	P	Thrombospondin-1
ruditapes_c10160	positive regulation of blood coagulation	stress response	P	Thrombospondin-1
ruditapes_c10160	inflammatory response	stress response	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	Thrombospondin-1
ruditapes_c10160	negative regulation of caspase activity	death	P	Thrombospondin-1
ruditapes_lrc18819	response to hypoxia	stress response	P	Thrombospondin-1
ruditapes_c10160	negative regulation of focal adhesion formation	cell adhesion	P	Thrombospondin-1
ruditapes_c10160	negative regulation of focal adhesion formation	cell organization and biogenesis	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of focal adhesion formation	cell adhesion	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of focal adhesion formation	cell organization and biogenesis	P	Thrombospondin-1
ruditapes_c10160	peptide cross-linking	protein metabolism	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of blood coagulation	stress response	P	Thrombospondin-1
ruditapes_c10160	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of plasma membrane long-chain fatty acid transport	transport	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of endothelial cell migration	other biological processes	P	Thrombospondin-1
ruditapes_c10160	cellular response to heat	stress response	P	Thrombospondin-1
ruditapes_c10160	negative regulation of cGMP-mediated signaling	signal transduction	P	Thrombospondin-1
ruditapes_c10160	positive regulation of fibroblast migration	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	blood coagulation	stress response	P	Thrombospondin-1
ruditapes_c10160	negative regulation of nitric oxide mediated signal transduction	signal transduction	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of fibroblast growth factor receptor signaling pathway	signal transduction	P	Thrombospondin-1
ruditapes_c10160	negative regulation of fibroblast growth factor receptor signaling pathway	signal transduction	P	Thrombospondin-1
ruditapes_c10160	response to progesterone stimulus	other biological processes	P	Thrombospondin-1
ruditapes_c10160	negative regulation of dendritic cell antigen processing and presentation	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of cell-substrate adhesion	cell adhesion	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of cell migration	other biological processes	P	Thrombospondin-1
ruditapes_c10160	positive regulation of chemotaxis	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of caspase activity	death	P	Thrombospondin-1
ruditapes_lrc18819	negative regulation of cell-matrix adhesion	cell adhesion	P	Thrombospondin-1
ruditapes_lrc18819	positive regulation of translation	protein metabolism	P	Thrombospondin-1
ruditapes_c10160	negative regulation of blood vessel endothelial cell migration	other biological processes	P	Thrombospondin-1
ruditapes_c10160	response to drug	other biological processes	P	Thrombospondin-1
ruditapes_lrc18819	response to magnesium ion	other biological processes	P	Thrombospondin-1
ruditapes_c29008	glycerol ether metabolic process	other metabolic processes	P	Protein disulfide-isomerase A4 (EC 5.3.4.1) (Endoplasmic reticulum resident protein 72) (ER protein 72) (ERp-72) (ERp72)
ruditapes_c29008	cell redox homeostasis	other biological processes	P	Protein disulfide-isomerase A4 (EC 5.3.4.1) (Endoplasmic reticulum resident protein 72) (ER protein 72) (ERp-72) (ERp72)
ruditapes_c27887	"cytokinesis, completion of separation"	other biological processes	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c6291	"cytokinesis, completion of separation"	other biological processes	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c6291	cell budding	other biological processes	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c27887	cell budding	other biological processes	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c27887	cell wall organization	cell organization and biogenesis	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c6291	chitin biosynthetic process	other metabolic processes	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c27887	chitin biosynthetic process	other metabolic processes	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c6291	cell wall organization	cell organization and biogenesis	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c8220	evasion by virus of host immune response	stress response	P	Non-structural protein 1 (NS1) (NS1B)
ruditapes_c8220	interspecies interaction between organisms	other biological processes	P	Non-structural protein 1 (NS1) (NS1B)
ruditapes_c7042	neuropeptide signaling pathway	signal transduction	P	FMRF-amide neuropeptides [Cleaved into: FLRF-amide; FMRF-amide]
ruditapes_c9292	proteolysis	protein metabolism	P	Neprilysin (EC 3.4.24.11) (Atriopeptidase) (Enkephalinase) (Neutral endopeptidase 24.11) (NEP) (Neutral endopeptidase) (Skin fibroblast elastase) (SFE) (CD antigen CD10)
ruditapes_c24750	aerobic respiration	other metabolic processes	P	"Cytochrome b-c1 complex subunit Rieske, mitochondrial (EC 1.10.2.2) (Complex III subunit 5) (Rieske iron-sulfur protein) (RISP) (Ubiquinol-cytochrome c reductase iron-sulfur subunit)"
ruditapes_c24750	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit Rieske, mitochondrial (EC 1.10.2.2) (Complex III subunit 5) (Rieske iron-sulfur protein) (RISP) (Ubiquinol-cytochrome c reductase iron-sulfur subunit)"
ruditapes_c24750	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit Rieske, mitochondrial (EC 1.10.2.2) (Complex III subunit 5) (Rieske iron-sulfur protein) (RISP) (Ubiquinol-cytochrome c reductase iron-sulfur subunit)"
ruditapes_c24750	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit Rieske, mitochondrial (EC 1.10.2.2) (Complex III subunit 5) (Rieske iron-sulfur protein) (RISP) (Ubiquinol-cytochrome c reductase iron-sulfur subunit)"
ruditapes_c24750	transport	transport	P	"Cytochrome b-c1 complex subunit Rieske, mitochondrial (EC 1.10.2.2) (Complex III subunit 5) (Rieske iron-sulfur protein) (RISP) (Ubiquinol-cytochrome c reductase iron-sulfur subunit)"
ruditapes2_c2642	protein folding	protein metabolism	P	Endoplasmin (Heat shock 108 kDa protein) (HSP 108) (HSP108) (Heat shock protein 90 kDa beta member 1) (Transferrin-binding protein)
ruditapes2_c2642	response to stress	stress response	P	Endoplasmin (Heat shock 108 kDa protein) (HSP 108) (HSP108) (Heat shock protein 90 kDa beta member 1) (Transferrin-binding protein)
ruditapes_c9338	biological_process	other biological processes	P	Beta-microseminoprotein (Immunoglobulin-binding factor) (IGBF) (PN44) (Prostate secreted seminal plasma protein) (Prostate secretory protein of 94 amino acids) (PSP-94) (PSP94) (Seminal plasma beta-inhibin)
ruditapes_c29228	transport	transport	P	Cation-independent mannose-6-phosphate receptor (CI Man-6-P receptor) (CI-MPR) (M6PR) (300 kDa mannose 6-phosphate receptor) (MPR 300) (Insulin-like growth factor 2 receptor) (Insulin-like growth factor II receptor) (IGF-II receptor) (CD antigen CD222)
ruditapes_c11849	synaptic transmission	cell-cell signaling	P	Muscarinic acetylcholine receptor M4
ruditapes_c11849	muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M4
ruditapes_c11849	signal transduction	signal transduction	P	Muscarinic acetylcholine receptor M4
ruditapes_c11849	cell proliferation	cell cycle and proliferation	P	Muscarinic acetylcholine receptor M4
ruditapes_c11849	G-protein coupled receptor protein signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M4
ruditapes_c11849	inhibition of adenylate cyclase activity by muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M4
ruditapes_c11849	inhibition of adenylate cyclase activity by muscarinic acetylcholine receptor signaling pathway	other metabolic processes	P	Muscarinic acetylcholine receptor M4
ruditapes_c11849	cell surface receptor linked signal transduction	signal transduction	P	Muscarinic acetylcholine receptor M4
ruditapes_c11849	response to organic substance	other biological processes	P	Muscarinic acetylcholine receptor M4
ruditapes_c13388	cell adhesion	cell adhesion	P	Protein FimF
ruditapes2_c2189	photorespiration	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
ruditapes2_c2189	photosynthesis	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
ruditapes2_c2189	reductive pentose-phosphate cycle	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
ruditapes2_c2189	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
ruditapes2_c2189	oxidation reduction	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
ruditapes_s39990	proteolysis	protein metabolism	P	Chymotrypsin-like elastase family member 2A (EC 3.4.21.71) (Elastase-2A)
ruditapes_s39841	proteolysis	protein metabolism	P	Chymotrypsin-like elastase family member 2A (EC 3.4.21.71) (Elastase-2A)
ruditapes2_c894	iron ion transport	transport	P	Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1)
ruditapes2_c894	negative regulation of cell proliferation	cell cycle and proliferation	P	Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1)
ruditapes2_c894	oxidation reduction	other metabolic processes	P	Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1)
ruditapes2_c894	cellular iron ion homeostasis	other biological processes	P	Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1)
ruditapes2_c894	immune response	other biological processes	P	Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1)
ruditapes_c16290	response to lipopolysaccharide	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c32637	response to glucocorticoid stimulus	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s37642	response to antibiotic	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c32637	metabolic process	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c16290	response to antibiotic	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s37642	response to lipopolysaccharide	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c16290	metabolic process	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c32637	response to antibiotic	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s37642	metabolic process	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c32637	response to lipopolysaccharide	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c16290	response to vitamin D	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c6248	metabolic process	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c6248	response to vitamin D	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c16290	response to glucocorticoid stimulus	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s37642	response to vitamin D	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c32637	dephosphorylation	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c6248	dephosphorylation	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c6248	response to glucocorticoid stimulus	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s37642	dephosphorylation	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s37642	response to glucocorticoid stimulus	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c6248	response to antibiotic	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c6248	response to lipopolysaccharide	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c16290	dephosphorylation	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c32637	response to vitamin D	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes2_c2080	bone mineralization	developmental processes	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (Hepatic lectin R2/3) (HL-2) (rHL-2)
ruditapes2_c2080	regulation of protein stability	protein metabolism	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (Hepatic lectin R2/3) (HL-2) (rHL-2)
ruditapes2_c2080	endocytosis	transport	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (Hepatic lectin R2/3) (HL-2) (rHL-2)
ruditapes2_c2080	endocytosis	cell organization and biogenesis	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (Hepatic lectin R2/3) (HL-2) (rHL-2)
ruditapes2_c2080	lipid homeostasis	other biological processes	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (Hepatic lectin R2/3) (HL-2) (rHL-2)
ruditapes2_c2080	glycoprotein metabolic process	other metabolic processes	P	Asialoglycoprotein receptor 2 (ASGP-R 2) (ASGPR 2) (Hepatic lectin R2/3) (HL-2) (rHL-2)
ruditapes_c16881	DNA integration	DNA metabolism	P	Gag-Pol polyprotein (Pr180gag-pol) [Cleaved into: Integrase p46 (IN)] (Fragment)
ruditapes2_c2327	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase ICP0 (EC 6.3.2.-) (Alpha-0 protein) (Immediate-early protein IE110) (Trans-acting transcriptional protein ICP0) (VMW110)
ruditapes2_c2327	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase ICP0 (EC 6.3.2.-) (Alpha-0 protein) (Immediate-early protein IE110) (Trans-acting transcriptional protein ICP0) (VMW110)
ruditapes2_c2327	response to type I interferon	stress response	P	E3 ubiquitin-protein ligase ICP0 (EC 6.3.2.-) (Alpha-0 protein) (Immediate-early protein IE110) (Trans-acting transcriptional protein ICP0) (VMW110)
ruditapes2_c2327	interspecies interaction between organisms	other biological processes	P	E3 ubiquitin-protein ligase ICP0 (EC 6.3.2.-) (Alpha-0 protein) (Immediate-early protein IE110) (Trans-acting transcriptional protein ICP0) (VMW110)
ruditapes2_c2327	reactivation of latent virus	other biological processes	P	E3 ubiquitin-protein ligase ICP0 (EC 6.3.2.-) (Alpha-0 protein) (Immediate-early protein IE110) (Trans-acting transcriptional protein ICP0) (VMW110)
ruditapes2_c2327	positive regulation of protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase ICP0 (EC 6.3.2.-) (Alpha-0 protein) (Immediate-early protein IE110) (Trans-acting transcriptional protein ICP0) (VMW110)
ruditapes2_c2327	protein polyubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase ICP0 (EC 6.3.2.-) (Alpha-0 protein) (Immediate-early protein IE110) (Trans-acting transcriptional protein ICP0) (VMW110)
ruditapes2_c2327	evasion by virus of host immune response	stress response	P	E3 ubiquitin-protein ligase ICP0 (EC 6.3.2.-) (Alpha-0 protein) (Immediate-early protein IE110) (Trans-acting transcriptional protein ICP0) (VMW110)
ruditapes_c7564	organ regeneration	developmental processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to carbohydrate stimulus	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to metal ion	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	heme biosynthetic process	other metabolic processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to hypoxia	stress response	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	tetrapyrrole biosynthetic process	other metabolic processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to organic cyclic substance	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	astrocyte differentiation	developmental processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to estradiol stimulus	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to amino acid stimulus	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to drug	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to zinc ion	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	peptidyl-pyrromethane cofactor linkage	protein metabolism	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to cobalt ion	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to methylmercury	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	porphyrin metabolic process	other metabolic processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to lead ion	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to vitamin	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to nutrient levels	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	response to hormone stimulus	other biological processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c7564	porphyrin biosynthetic process	other metabolic processes	P	Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c23975	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_c23975	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_c23975	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_c23975	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_c23975	proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_c23975	ion transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_c23975	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_c23975	transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_lrc6265	translation	protein metabolism	P	60S ribosomal protein L4-A (L1A)
ruditapes_lrc37060	translation	protein metabolism	P	60S ribosomal protein L4-A (L1A)
ruditapes_c17405	oxidation reduction	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c17405	glycolysis	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c17405	glucose metabolic process	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c19712	oxidation reduction	other metabolic processes	P	Nitrate reductase [NADH] 2 (NR2) (EC 1.7.1.1)
ruditapes_c19712	nitrate assimilation	other metabolic processes	P	Nitrate reductase [NADH] 2 (NR2) (EC 1.7.1.1)
ruditapes_c24303	methionine metabolic process	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Methionine-requiring protein 3) (Sulfate adenylate transferase) (SAT)
ruditapes_c24303	sulfate assimilation	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Methionine-requiring protein 3) (Sulfate adenylate transferase) (SAT)
ruditapes_c24303	methionine biosynthetic process	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Methionine-requiring protein 3) (Sulfate adenylate transferase) (SAT)
ruditapes_c24303	cellular amino acid biosynthetic process	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Methionine-requiring protein 3) (Sulfate adenylate transferase) (SAT)
ruditapes_c24303	cysteine biosynthetic process	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Methionine-requiring protein 3) (Sulfate adenylate transferase) (SAT)
ruditapes_c20178	RNA-dependent DNA replication	DNA metabolism	P	LINE-1 reverse transcriptase homolog (EC 2.7.7.49)
ruditapes_c13738	RNA-dependent DNA replication	DNA metabolism	P	LINE-1 reverse transcriptase homolog (EC 2.7.7.49)
ruditapes_c12518	cell surface receptor linked signal transduction	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	regulation of cell cycle	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	positive regulation of protein kinase activity	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	release of sequestered calcium ion into cytosol	transport	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	axon guidance	developmental processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	T cell differentiation	developmental processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	T cell receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	positive regulation of antigen receptor-mediated signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	negative regulation of protein kinase activity	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	positive regulation of B cell proliferation	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	immunoglobulin biosynthetic process	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	positive regulation of T cell proliferation	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	regulation of S phase	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	defense response to virus	stress response	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	axon guidance	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	B cell proliferation	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	negative regulation of T cell mediated cytotoxicity	death	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	B cell receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c12518	negative regulation of cytokine-mediated signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase C (EC 3.1.3.48) (Leukocyte common antigen) (L-CA) (T200) (CD antigen CD45)
ruditapes_c26294	peptide cross-linking	protein metabolism	P	Protein-glutamine gamma-glutamyltransferase 2 (EC 2.3.2.13) (Tissue transglutaminase) (Transglutaminase C) (TG(C)) (TGC) (TGase C) (Transglutaminase-2) (TGase-2)
ruditapes_c16804	innate immune response	stress response	P	Complement factor H (H factor 1)
ruditapes_c16804	complement activation	stress response	P	Complement factor H (H factor 1)
ruditapes_c16804	complement activation	protein metabolism	P	Complement factor H (H factor 1)
ruditapes_c16804	"complement activation, alternative pathway"	stress response	P	Complement factor H (H factor 1)
ruditapes_c16804	"complement activation, alternative pathway"	protein metabolism	P	Complement factor H (H factor 1)
ruditapes_c16076	innate immune response	stress response	P	C4b-binding protein (C4bp)
ruditapes_c16076	"complement activation, classical pathway"	stress response	P	C4b-binding protein (C4bp)
ruditapes_c16076	"complement activation, classical pathway"	protein metabolism	P	C4b-binding protein (C4bp)
ruditapes_c18542	oxidation reduction	other metabolic processes	P	Nitrate reductase [NADPH] (NR) (EC 1.7.1.3)
ruditapes_c18542	nitrate assimilation	other metabolic processes	P	Nitrate reductase [NADPH] (NR) (EC 1.7.1.3)
ruditapes_c7319	courtship behavior	other biological processes	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	dorsal closure	developmental processes	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	open tracheal system development	developmental processes	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	oogenesis	other biological processes	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	ovarian nurse cell to oocyte transport	transport	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	regulation of actin filament polymerization	protein metabolism	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	ovarian ring canal formation	cell organization and biogenesis	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	determination of adult life span	developmental processes	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	karyosome formation	cell organization and biogenesis	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	DNA endoreduplication	cell cycle and proliferation	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	DNA endoreduplication	DNA metabolism	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	ovarian ring canal formation	transport	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	cellularization	developmental processes	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	head involution	developmental processes	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	salivary gland morphogenesis	developmental processes	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	ovarian fusome organization	cell organization and biogenesis	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	sensitization	other biological processes	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	imaginal disc-derived male genitalia development	developmental processes	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	regulation of actin filament polymerization	cell organization and biogenesis	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	actin cytoskeleton organization	cell organization and biogenesis	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	JNK cascade	signal transduction	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c7319	JNK cascade	stress response	P	Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)
ruditapes_c8433	negative regulation of apoptosis	death	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	viral reproduction	other biological processes	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	regulation of inflammatory response	stress response	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	innate immune response-activating signal transduction	signal transduction	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	innate immune response-activating signal transduction	stress response	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	positive regulation of cell proliferation	cell cycle and proliferation	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	interspecies interaction between organisms	other biological processes	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	regulation of cell shape	cell organization and biogenesis	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	peptidyl-tyrosine phosphorylation	protein metabolism	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	leukocyte migration during immune response	other biological processes	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	regulation of transcription factor activity	RNA metabolism	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	innate immune response	stress response	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	phagocytosis	transport	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	phagocytosis	cell organization and biogenesis	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	exocytosis	transport	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	interferon-gamma-mediated signaling pathway	signal transduction	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	defense response to Gram-positive bacterium	stress response	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	cytokine-mediated signaling pathway	signal transduction	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	positive regulation of actin filament polymerization	cell organization and biogenesis	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	cell adhesion	cell adhesion	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	mesoderm development	developmental processes	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	regulation of phagocytosis	transport	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	regulation of phagocytosis	cell organization and biogenesis	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	respiratory burst after phagocytosis	stress response	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	respiratory burst after phagocytosis	other metabolic processes	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	integrin-mediated signaling pathway	signal transduction	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	lipopolysaccharide-mediated signaling pathway	signal transduction	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	positive regulation of actin filament polymerization	protein metabolism	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	inflammatory response	stress response	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	protein amino acid autophosphorylation	protein metabolism	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	leukocyte degranulation	transport	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c8433	regulation of defense response to virus by virus	stress response	P	Tyrosine-protein kinase HCK (EC 2.7.10.2) (Hematopoietic cell kinase) (Hemopoietic cell kinase) (p59-HCK/p60-HCK) (p59Hck) (p61Hck)
ruditapes_c21214	inflammatory response	stress response	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c7145	innate immune response	stress response	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c21214	negative regulation of endopeptidase activity	other biological processes	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c7145	positive regulation of smooth muscle contraction	other biological processes	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c7145	"complement activation, classical pathway"	stress response	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c7145	complement activation	protein metabolism	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c7145	inflammatory response	stress response	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c21214	complement activation	stress response	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c21214	complement activation	protein metabolism	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c7145	negative regulation of endopeptidase activity	other biological processes	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c7145	"complement activation, classical pathway"	protein metabolism	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c21214	innate immune response	stress response	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c21214	"complement activation, classical pathway"	stress response	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c21214	"complement activation, classical pathway"	protein metabolism	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c21214	positive regulation of smooth muscle contraction	other biological processes	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes_c7145	complement activation	stress response	P	Complement C4 [Cleaved into: Complement C4 beta chain; Complement C4 alpha chain; C4a anaphylatoxin; Complement C4 gamma chain]
ruditapes2_lrc5047	signal transduction	signal transduction	P	Envelope glycoprotein (GP) (M polyprotein) [Cleaved into: Glycoprotein G1; Glycoprotein G2]
ruditapes2_lrc5047	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein (GP) (M polyprotein) [Cleaved into: Glycoprotein G1; Glycoprotein G2]
ruditapes2_lrc5047	evasion by virus of host immune response	stress response	P	Envelope glycoprotein (GP) (M polyprotein) [Cleaved into: Glycoprotein G1; Glycoprotein G2]
ruditapes_c9578	defense response to bacterium	stress response	P	Bacteriocin BCN5
ruditapes_c9578	proteolysis	protein metabolism	P	Bacteriocin BCN5
ruditapes_c9578	cytolysis	death	P	Bacteriocin BCN5
ruditapes_c30601	negative regulation of endopeptidase activity	other biological processes	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	negative regulation of plasminogen activation	protein metabolism	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	response to organic substance	other biological processes	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	fibrinolysis	stress response	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	negative regulation of peptidase activity	other biological processes	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	positive regulation of stress fiber formation	cell organization and biogenesis	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	positive regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	platelet activation	stress response	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	positive regulation of collagen biosynthetic process	other metabolic processes	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	negative regulation of fibrinolysis	stress response	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	positive regulation of JNK cascade	signal transduction	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	positive regulation of JNK cascade	stress response	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	regulation of blood vessel size by renin-angiotensin	other biological processes	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	acute-phase response	stress response	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	collagen fibril organization	cell organization and biogenesis	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	blood coagulation	stress response	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	regulation of proteolysis	protein metabolism	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	platelet degranulation	transport	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	blood vessel morphogenesis	developmental processes	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	positive regulation of ERK1 and ERK2 cascade	signal transduction	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_c30601	positive regulation of cell differentiation	other biological processes	P	Alpha-2-antiplasmin (Alpha-2-AP) (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Serpin F2)
ruditapes_s36240	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s36240	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37213	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37213	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37890	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37213	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37213	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s36240	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37890	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s36240	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37890	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s36240	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37213	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37890	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s36240	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37213	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37890	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37890	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c16897	autophagic cell death	death	P	Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Ecdysone-induced protein 28/29 kDa) (Methionine-S-sulfoxide reductase) (Peptide-methionine (S)-S-oxide reductase)
ruditapes_c16897	salivary gland cell autophagic cell death	developmental processes	P	Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Ecdysone-induced protein 28/29 kDa) (Methionine-S-sulfoxide reductase) (Peptide-methionine (S)-S-oxide reductase)
ruditapes_c16897	salivary gland cell autophagic cell death	death	P	Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Ecdysone-induced protein 28/29 kDa) (Methionine-S-sulfoxide reductase) (Peptide-methionine (S)-S-oxide reductase)
ruditapes_c16897	protein metabolic process	protein metabolism	P	Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Ecdysone-induced protein 28/29 kDa) (Methionine-S-sulfoxide reductase) (Peptide-methionine (S)-S-oxide reductase)
ruditapes_c16897	sulfur amino acid metabolic process	other metabolic processes	P	Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Ecdysone-induced protein 28/29 kDa) (Methionine-S-sulfoxide reductase) (Peptide-methionine (S)-S-oxide reductase)
ruditapes_c16897	oxidation reduction	other metabolic processes	P	Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Ecdysone-induced protein 28/29 kDa) (Methionine-S-sulfoxide reductase) (Peptide-methionine (S)-S-oxide reductase)
ruditapes_c26658	protein amino acid phosphorylation	protein metabolism	P	DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (EC 2.7.7.6) (DNA-directed RNA polymerase II subunit A) (DNA-directed RNA polymerase III largest subunit)
ruditapes_c26658	transcription from RNA polymerase II promoter	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (EC 2.7.7.6) (DNA-directed RNA polymerase II subunit A) (DNA-directed RNA polymerase III largest subunit)
ruditapes_c26658	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (EC 2.7.7.6) (DNA-directed RNA polymerase II subunit A) (DNA-directed RNA polymerase III largest subunit)
ruditapes_lrc22132	steroid biosynthetic process	other metabolic processes	P	"Farnesyl pyrophosphate synthase (FPP synthase) (FPS) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase) (Dimethylallyltranstransferase) (EC 2.5.1.1) (Farnesyl diphosphate synthase) (Geranyltranstransferase)"
ruditapes_lrc22132	lipid biosynthetic process	other metabolic processes	P	"Farnesyl pyrophosphate synthase (FPP synthase) (FPS) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase) (Dimethylallyltranstransferase) (EC 2.5.1.1) (Farnesyl diphosphate synthase) (Geranyltranstransferase)"
ruditapes_lrc22132	sterol biosynthetic process	other metabolic processes	P	"Farnesyl pyrophosphate synthase (FPP synthase) (FPS) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase) (Dimethylallyltranstransferase) (EC 2.5.1.1) (Farnesyl diphosphate synthase) (Geranyltranstransferase)"
ruditapes_lrc22132	cholesterol biosynthetic process	other metabolic processes	P	"Farnesyl pyrophosphate synthase (FPP synthase) (FPS) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase) (Dimethylallyltranstransferase) (EC 2.5.1.1) (Farnesyl diphosphate synthase) (Geranyltranstransferase)"
ruditapes_lrc22132	isoprenoid biosynthetic process	other metabolic processes	P	"Farnesyl pyrophosphate synthase (FPP synthase) (FPS) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase) (Dimethylallyltranstransferase) (EC 2.5.1.1) (Farnesyl diphosphate synthase) (Geranyltranstransferase)"
ruditapes_c15315	learning or memory	other biological processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	response to organic cyclic substance	other biological processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	steroid metabolic process	other metabolic processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	lipid metabolic process	other metabolic processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	response to peptide hormone stimulus	other biological processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	positive regulation of cell proliferation	cell cycle and proliferation	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	sphingolipid metabolic process	other metabolic processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	female pregnancy	other biological processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	skin development	developmental processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	epidermis development	developmental processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	glycosphingolipid metabolic process	other metabolic processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	response to estrogen stimulus	other biological processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	response to pH	other biological processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	metabolic process	other metabolic processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_c15315	steroid catabolic process	other metabolic processes	P	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)
ruditapes_lrc38344	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4390	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32164	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	microtubule-based process	other biological processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33408	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	establishment or maintenance of polarity of follicular epithelium	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5371	establishment or maintenance of polarity of follicular epithelium	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	protein amino acid phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4727	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc6394	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc35350	"regulation of tube architecture, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37660	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc37565	protein amino acid autophosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc15447	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc38344	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	peptidyl-serine phosphorylation	protein metabolism	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc33505	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc32860	"epithelial cell migration, open tracheal system"	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc5651	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	mitosis	cell cycle and proliferation	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4623	mitosis	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4111	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_lrc34251	adherens junction organization	cell organization and biogenesis	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc2606	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes2_lrc4875	open tracheal system development	developmental processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Abnormal wing disks protein) (Killer of prune protein)
ruditapes_c20684	nodulation	other biological processes	P	Nodulation protein 10 (Nodulation protein X) (Probable sugar acetylase)
ruditapes_c24728	phosphorylation	other metabolic processes	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c24728	cell proliferation	cell cycle and proliferation	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c24728	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c24728	regulation of TOR signaling pathway	signal transduction	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c24728	cell growth	other biological processes	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c24728	negative regulation of gene expression	other metabolic processes	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c24728	cell differentiation	other biological processes	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c24728	regulation of phosphate transport	transport	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c24728	regulation of ERK1 and ERK2 cascade	signal transduction	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c24728	protein amino acid phosphorylation	protein metabolism	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c24728	columnar/cuboidal epithelial cell development	developmental processes	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c24728	spermatogenesis	other biological processes	P	Proto-oncogene tyrosine-protein kinase ROS (EC 2.7.10.1) (Proto-oncogene c-Ros) (Proto-oncogene c-Ros-1) (Receptor tyrosine kinase c-ros oncogene 1) (c-Ros receptor tyrosine kinase)
ruditapes_c19410	chromatin silencing	RNA metabolism	P	Lamin Dm0
ruditapes_c19410	"terminal branching, open tracheal system"	developmental processes	P	Lamin Dm0
ruditapes_c19410	compound eye morphogenesis	developmental processes	P	Lamin Dm0
ruditapes_c19410	mitotic nuclear envelope reassembly	cell organization and biogenesis	P	Lamin Dm0
ruditapes_c19410	nuclear migration	other biological processes	P	Lamin Dm0
ruditapes_c19410	gonad morphogenesis	developmental processes	P	Lamin Dm0
ruditapes_c19410	nuclear envelope organization	cell organization and biogenesis	P	Lamin Dm0
ruditapes_c19410	chitin-based cuticle development	developmental processes	P	Lamin Dm0
ruditapes_c19410	mitotic nuclear envelope reassembly	cell cycle and proliferation	P	Lamin Dm0
ruditapes_c19410	digestive tract morphogenesis	developmental processes	P	Lamin Dm0
ruditapes_c19410	central nervous system development	developmental processes	P	Lamin Dm0
ruditapes_c19410	nucleus organization	cell organization and biogenesis	P	Lamin Dm0
ruditapes_c656	transport	transport	P	Purpurin
ruditapes_c14100	multicellular organismal development	developmental processes	P	Protein toll
ruditapes_c14100	signal transduction	signal transduction	P	Protein toll
ruditapes_c14100	cell adhesion	cell adhesion	P	Protein toll
ruditapes_c14100	innate immune response	stress response	P	Protein toll
ruditapes2_lrc3839	nucleosome assembly	cell organization and biogenesis	P	Histone H2A.V (H2A.F/Z) (Fragment)
ruditapes_lrc36530	nucleosome assembly	cell organization and biogenesis	P	Histone H2A.V (H2A.F/Z) (Fragment)
ruditapes2_lrc2144	nucleosome assembly	cell organization and biogenesis	P	Histone H2A.V (H2A.F/Z) (Fragment)
ruditapes2_lrc4108	nucleosome assembly	cell organization and biogenesis	P	Histone H2A.V (H2A.F/Z) (Fragment)
ruditapes_lrc18777	nucleosome assembly	cell organization and biogenesis	P	Histone H2A.V (H2A.F/Z) (Fragment)
ruditapes2_lrc4833	nucleosome assembly	cell organization and biogenesis	P	Histone H2A.V (H2A.F/Z) (Fragment)
ruditapes_c6944	metabolic process	other metabolic processes	P	2-oxoisovalerate dehydrogenase subunit alpha (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha)
ruditapes_c6944	oxidation reduction	other metabolic processes	P	2-oxoisovalerate dehydrogenase subunit alpha (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha)
ruditapes_c20928	fatty acid metabolic process	other metabolic processes	P	"3-ketoacyl-CoA thiolase, peroxisomal (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Peroxisomal 3-oxoacyl-CoA thiolase)"
ruditapes_c20928	metabolic process	other metabolic processes	P	"3-ketoacyl-CoA thiolase, peroxisomal (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Peroxisomal 3-oxoacyl-CoA thiolase)"
ruditapes_c20928	lipid metabolic process	other metabolic processes	P	"3-ketoacyl-CoA thiolase, peroxisomal (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Peroxisomal 3-oxoacyl-CoA thiolase)"
ruditapes_c20928	cellular lipid metabolic process	other metabolic processes	P	"3-ketoacyl-CoA thiolase, peroxisomal (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Peroxisomal 3-oxoacyl-CoA thiolase)"
ruditapes_c20928	fatty acid beta-oxidation using acyl-CoA oxidase	other metabolic processes	P	"3-ketoacyl-CoA thiolase, peroxisomal (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Peroxisomal 3-oxoacyl-CoA thiolase)"
ruditapes_c20928	generation of precursor metabolites and energy	other metabolic processes	P	"3-ketoacyl-CoA thiolase, peroxisomal (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Peroxisomal 3-oxoacyl-CoA thiolase)"
ruditapes2_c9	central nervous system development	developmental processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of MAPKKK cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	organ regeneration	developmental processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of tumor necrosis factor-mediated signaling pathway	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	response to toxin	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of stress-activated MAPK cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of stress-activated MAPK cascade	stress response	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	response to amino acid stimulus	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	regulation of ERK1 and ERK2 cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	response to ethanol	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	response to estradiol stimulus	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of acute inflammatory response	stress response	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of leukocyte proliferation	cell cycle and proliferation	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	response to reactive oxygen species	stress response	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of leukocyte proliferation	cell cycle and proliferation	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of acute inflammatory response	stress response	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	anti-apoptosis	death	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	response to amino acid stimulus	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	regulation of stress-activated MAPK cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	regulation of stress-activated MAPK cascade	stress response	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of tumor necrosis factor production	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	regulation of ERK1 and ERK2 cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	regulation of phosphorylation	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	response to nutrient levels	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	xenobiotic metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	response to estradiol stimulus	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	response to ethanol	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	cellular response to insulin stimulus	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of stress-activated MAPK cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of stress-activated MAPK cascade	stress response	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of JUN kinase activity	protein metabolism	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	oligodendrocyte development	developmental processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	regulation of phosphorylation	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	response to reactive oxygen species	stress response	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of MAP kinase activity	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of JUN kinase activity	protein metabolism	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of JUN kinase activity	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of JUN kinase activity	stress response	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	oligodendrocyte development	developmental processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	cellular response to insulin stimulus	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	xenobiotic metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of JUN kinase activity	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of JUN kinase activity	stress response	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of MAP kinase activity	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of tumor necrosis factor production	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	regulation of stress-activated MAPK cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	regulation of stress-activated MAPK cascade	stress response	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	response to nutrient levels	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of apoptosis	death	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of protein kinase activity	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	response to toxin	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	anti-apoptosis	death	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of necrotic cell death	death	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	organ regeneration	developmental processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of nitric-oxide synthase biosynthetic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	response to L-ascorbic acid	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	positive regulation of superoxide release	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of interleukin-1 beta production	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of biosynthetic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of nitric-oxide synthase biosynthetic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of MAPKKK cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of tumor necrosis factor-mediated signaling pathway	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of protein kinase activity	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	central nervous system development	developmental processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	response to L-ascorbic acid	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	negative regulation of apoptosis	death	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of interleukin-1 beta production	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of necrotic cell death	death	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c391	negative regulation of biosynthetic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes2_c9	positive regulation of superoxide release	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) (GSTP1-1)
ruditapes_c28036	positive regulation of insulin secretion	transport	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	positive regulation of insulin secretion	cell-cell signaling	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	positive regulation of catalytic activity	other biological processes	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	positive regulation of actin filament polymerization	protein metabolism	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	positive regulation of actin filament polymerization	cell organization and biogenesis	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	phosphorylation	other metabolic processes	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	macrophage activation during immune response	other biological processes	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	positive regulation of MAPKKK cascade	signal transduction	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	release of sequestered calcium ion into cytosol	transport	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	lipopolysaccharide-mediated signaling pathway	signal transduction	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	positive regulation of epithelial cell migration	other biological processes	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	positive regulation of mucus secretion	transport	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	regulation of lipid metabolic process	other metabolic processes	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	cell adhesion	cell adhesion	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	"positive regulation of synaptic transmission, GABAergic"	cell-cell signaling	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	positive regulation of cell-substrate adhesion	cell adhesion	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	response to morphine	other biological processes	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	protein amino acid phosphorylation	protein metabolism	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	cell division	other biological processes	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	positive regulation of lipid catabolic process	other metabolic processes	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	positive regulation of fibroblast migration	other biological processes	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c28036	cell cycle	cell cycle and proliferation	P	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon)
ruditapes_c15433	positive regulation of cell proliferation	cell cycle and proliferation	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	cellular process	other biological processes	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	response to lipopolysaccharide	other biological processes	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	positive regulation of chronic inflammatory response to antigenic stimulus	stress response	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	cell proliferation	cell cycle and proliferation	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	lymph node development	developmental processes	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	immune response	other biological processes	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	transformed cell apoptosis	death	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	defense response to Gram-positive bacterium	stress response	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	positive regulation of apoptosis	death	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	positive regulation of interferon-gamma production	other biological processes	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	response to hypoxia	stress response	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	response to nutrient	other biological processes	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	positive regulation of humoral immune response mediated by circulating immunoglobulin	other biological processes	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	humoral immune response	other biological processes	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	response to drug	other biological processes	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c15433	inflammatory response	stress response	P	Lymphotoxin-alpha (LT-alpha) (TNF-beta) (Tumor necrosis factor ligand superfamily member 1)
ruditapes_c14312	cell projection organization	cell organization and biogenesis	P	25 kDa calcium-binding protein (TCBP-25) [Cleaved into: 10 kDa calcium-binding protein (TCBP-10)]
ruditapes_c38574	dephosphorylation	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c38557	metabolic process	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c38574	response to glucocorticoid stimulus	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c38574	metabolic process	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35698	response to lipopolysaccharide	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c38557	response to lipopolysaccharide	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c38574	response to lipopolysaccharide	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c38557	dephosphorylation	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35698	response to antibiotic	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c38574	response to antibiotic	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35698	response to vitamin D	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c38557	response to vitamin D	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35209	response to vitamin D	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c38557	response to antibiotic	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35698	dephosphorylation	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s39305	response to glucocorticoid stimulus	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s39305	response to lipopolysaccharide	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35698	response to glucocorticoid stimulus	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35209	metabolic process	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35698	metabolic process	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35209	response to glucocorticoid stimulus	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s39305	metabolic process	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c38574	response to vitamin D	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35209	response to antibiotic	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c38557	response to glucocorticoid stimulus	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35209	dephosphorylation	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s39305	response to antibiotic	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_c35209	response to lipopolysaccharide	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s39305	response to vitamin D	other biological processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes_s39305	dephosphorylation	other metabolic processes	P	"Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase 2) (Alkaline phosphatase liver/bone/kidney isozyme)"
ruditapes2_c1625	interspecies interaction between organisms	other biological processes	P	Glycoprotein C (gC) (Glycoprotein V) (gpV)
ruditapes2_c1625	evasion by virus of host immune response	stress response	P	Glycoprotein C (gC) (Glycoprotein V) (gpV)
ruditapes2_c1393	viral capsid assembly	cell organization and biogenesis	P	Capsid assembly protein 21
ruditapes2_c1393	virion assembly	cell organization and biogenesis	P	Capsid assembly protein 21
ruditapes2_lrc6849	cell migration	other biological processes	P	"Myosin, essential light chain (EMLC) (Myosin light chain alkali)"
ruditapes2_lrc6849	sorocarp development	stress response	P	"Myosin, essential light chain (EMLC) (Myosin light chain alkali)"
ruditapes2_lrc6849	cell motion	other biological processes	P	"Myosin, essential light chain (EMLC) (Myosin light chain alkali)"
ruditapes2_lrc6849	sorocarp development	developmental processes	P	"Myosin, essential light chain (EMLC) (Myosin light chain alkali)"
ruditapes2_lrc6849	cytokinesis	other biological processes	P	"Myosin, essential light chain (EMLC) (Myosin light chain alkali)"
ruditapes_s38473	"SRP-dependent cotranslational protein targeting to membrane, translocation"	transport	P	Heat shock protein SSA3
ruditapes_s38473	response to stress	stress response	P	Heat shock protein SSA3
ruditapes_s38473	ATP catabolic process	other metabolic processes	P	Heat shock protein SSA3
ruditapes_c4904	isoleucyl-tRNA aminoacylation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c4904	isoleucyl-tRNA aminoacylation	RNA metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c4904	translation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c4904	tRNA aminoacylation for protein translation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c4904	tRNA aminoacylation for protein translation	RNA metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c3522	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c3522	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes_c37767	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c37767	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c3522	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c37767	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes_c24979	ion transport	transport	P	Acetylcholine receptor subunit alpha-like 1
ruditapes_c24979	transport	transport	P	Acetylcholine receptor subunit alpha-like 1
ruditapes_c3930	carbohydrate metabolic process	other metabolic processes	P	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)
ruditapes_c3930	galactose metabolic process	other metabolic processes	P	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)
ruditapes_c30436	interspecies interaction between organisms	other biological processes	P	Structural polyprotein (p130) [Cleaved into: Capsid protein (EC 3.4.21.90) (Coat protein) (C); p62 (E3/E2); E3 protein (Spike glycoprotein E3); E2 envelope glycoprotein (Spike glycoprotein E2); 6K protein; E1 envelope glycoprotein (Spike glycoprotein E1)]
ruditapes_c30436	proteolysis	protein metabolism	P	Structural polyprotein (p130) [Cleaved into: Capsid protein (EC 3.4.21.90) (Coat protein) (C); p62 (E3/E2); E3 protein (Spike glycoprotein E3); E2 envelope glycoprotein (Spike glycoprotein E2); 6K protein; E1 envelope glycoprotein (Spike glycoprotein E1)]
ruditapes_c29083	positive regulation of Ras protein signal transduction	signal transduction	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of macrophage differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of multicellular organism growth	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of cell-matrix adhesion	cell adhesion	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of cellular protein metabolic process	protein metabolism	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	cell differentiation	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of monocyte differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	ossification	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	cell proliferation	cell cycle and proliferation	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of odontogenesis of dentine-containing tooth	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of protein kinase activity	other metabolic processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	homeostasis of number of cells within a tissue	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of cell proliferation	cell cycle and proliferation	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	regulation of ossification	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	odontogenesis	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	reproductive developmental process	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	osteoclast differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of mononuclear cell proliferation	cell cycle and proliferation	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of foam cell differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of gene expression	other metabolic processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of osteoclast differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	hemopoiesis	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	macrophage differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	innate immune response	stress response	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	mammary gland fat development	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	inflammatory response	stress response	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	positive regulation of cell migration	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	regulation of foam cell differentiation	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	branching involved in mammary gland duct morphogenesis	developmental processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes_c29083	monocyte activation	other biological processes	P	Macrophage colony-stimulating factor 1 (CSF-1) (M-CSF) (MCSF) (Lanimostim) [Cleaved into: Processed macrophage colony-stimulating factor 1]
ruditapes2_lrc3246	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-8 chain (Fragment)
ruditapes_c1452	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-8 chain (Fragment)
ruditapes_c1452	GTP catabolic process	other metabolic processes	P	Tubulin alpha-8 chain (Fragment)
ruditapes2_lrc3246	microtubule-based process	other biological processes	P	Tubulin alpha-8 chain (Fragment)
ruditapes2_lrc3246	microtubule-based movement	other biological processes	P	Tubulin alpha-8 chain (Fragment)
ruditapes2_lrc3246	GTP catabolic process	other metabolic processes	P	Tubulin alpha-8 chain (Fragment)
ruditapes_c1452	microtubule-based movement	other biological processes	P	Tubulin alpha-8 chain (Fragment)
ruditapes_c1452	microtubule-based process	other biological processes	P	Tubulin alpha-8 chain (Fragment)
ruditapes_s39315	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain] (Fragments)
ruditapes_lrc34795	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain] (Fragments)
ruditapes2_lrc5005	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain] (Fragments)
ruditapes_c1946	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain] (Fragments)
ruditapes_c4406	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain] (Fragments)
ruditapes_c2052	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain] (Fragments)
ruditapes2_lrc4424	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain] (Fragments)
ruditapes_c4444	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain] (Fragments)
ruditapes_lrc34021	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain] (Fragments)
ruditapes_lrc33803	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain] (Fragments)
ruditapes_s35422	microtubule-based process	other biological processes	P	Tubulin beta-4 chain (Beta-tubulin class-III)
ruditapes_s35422	GTP catabolic process	other metabolic processes	P	Tubulin beta-4 chain (Beta-tubulin class-III)
ruditapes_s35422	microtubule-based movement	other biological processes	P	Tubulin beta-4 chain (Beta-tubulin class-III)
ruditapes_s35422	protein polymerization	cell organization and biogenesis	P	Tubulin beta-4 chain (Beta-tubulin class-III)
ruditapes_c10875	pancreatic juice secretion	transport	P	Secretin
ruditapes_c27624	biosynthetic process	other metabolic processes	P	Anthranilate synthase component 1 (EC 4.1.3.27) (Anthranilate synthase component I)
ruditapes_lrc21414	metabolic process	other metabolic processes	P	Killer toxin subunits alpha/beta (RF2 protein) [Cleaved into: Killer toxin subunit alpha; Killer toxin subunit beta (EC 3.2.1.14) (Endochitinase)]
ruditapes_lrc21414	cell wall macromolecule catabolic process	other metabolic processes	P	Killer toxin subunits alpha/beta (RF2 protein) [Cleaved into: Killer toxin subunit alpha; Killer toxin subunit beta (EC 3.2.1.14) (Endochitinase)]
ruditapes_lrc21414	chitin catabolic process	other metabolic processes	P	Killer toxin subunits alpha/beta (RF2 protein) [Cleaved into: Killer toxin subunit alpha; Killer toxin subunit beta (EC 3.2.1.14) (Endochitinase)]
ruditapes_lrc21414	carbohydrate metabolic process	other metabolic processes	P	Killer toxin subunits alpha/beta (RF2 protein) [Cleaved into: Killer toxin subunit alpha; Killer toxin subunit beta (EC 3.2.1.14) (Endochitinase)]
ruditapes_lrc21414	polysaccharide catabolic process	other metabolic processes	P	Killer toxin subunits alpha/beta (RF2 protein) [Cleaved into: Killer toxin subunit alpha; Killer toxin subunit beta (EC 3.2.1.14) (Endochitinase)]
ruditapes2_c1720	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c1720	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c1720	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c1720	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c1720	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c2042	unidirectional conjugation	other biological processes	P	Protein virD4
ruditapes2_c2042	conjugation	other biological processes	P	Protein virD4
ruditapes_c10120	response to lead ion	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	response to nutrient	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	response to starvation	stress response	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	response to hypoxia	stress response	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	response to hormone stimulus	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	response to sucrose stimulus	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	response to drug	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	metabolic process	other metabolic processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	response to organic substance	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	response to nickel ion	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	carbohydrate metabolic process	other metabolic processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	response to ethanol	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	polysaccharide digestion	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c10120	response to estrogen stimulus	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c8598	carbohydrate metabolic process	other metabolic processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c24624	metabolic process	other metabolic processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c24624	carbohydrate metabolic process	other metabolic processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c8598	metabolic process	other metabolic processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c25994	DNA replication	DNA metabolism	P	DNA polymerase catalytic subunit (EC 2.7.7.7) (EC 3.1.26.4)
ruditapes_c25994	metabolic process	other metabolic processes	P	DNA polymerase catalytic subunit (EC 2.7.7.7) (EC 3.1.26.4)
ruditapes_c25994	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase catalytic subunit (EC 2.7.7.7) (EC 3.1.26.4)
ruditapes_lrc22696	negative regulation of peptidase activity	other biological processes	P	Bdellin B-3 (Fragment)
ruditapes_s37143	negative regulation of peptidase activity	other biological processes	P	Bdellin B-3 (Fragment)
ruditapes_lrc36440	negative regulation of peptidase activity	other biological processes	P	Bdellin B-3 (Fragment)
ruditapes_c6971	induction by virus of cell-cell fusion in host	other biological processes	P	Fusion glycoprotein F0 [Cleaved into: Fusion glycoprotein F2; Fusion glycoprotein F1]
ruditapes_lrc38131	cellular process	other biological processes	P	Methionine aminopeptidase (MAP) (EC 3.4.11.18) (Peptidase M)
ruditapes_lrc38131	proteolysis	protein metabolism	P	Methionine aminopeptidase (MAP) (EC 3.4.11.18) (Peptidase M)
ruditapes_lrc38721	proteolysis	protein metabolism	P	Methionine aminopeptidase (MAP) (EC 3.4.11.18) (Peptidase M)
ruditapes_lrc38721	cellular process	other biological processes	P	Methionine aminopeptidase (MAP) (EC 3.4.11.18) (Peptidase M)
ruditapes_s38067	cellular process	other biological processes	P	Methionine aminopeptidase (MAP) (EC 3.4.11.18) (Peptidase M)
ruditapes_s38067	proteolysis	protein metabolism	P	Methionine aminopeptidase (MAP) (EC 3.4.11.18) (Peptidase M)
ruditapes_s35549	transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_s35549	proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_s35549	ATP synthesis coupled proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_s35549	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_s35549	ATP biosynthetic process	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_s35549	ion transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c29006	diaminopimelate biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c29006	methionine biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c29006	oxidation reduction	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c29006	lysine biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c29006	cellular amino acid metabolic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c29006	threonine biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c29006	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c29006	isoleucine biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c29006	cellular amino acid biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes2_lrc4131	flagellum organization	cell organization and biogenesis	P	Basal-body rod modification protein FlgD
ruditapes_c28269	cytolysis	death	P	RTX-II toxin-activating lysine-acyltransferase ApxIIC (EC 2.3.1.-) (APX-IIC) (Cytolysin IIC) (CLY-IIC) (HLY-IIC) (RTX-II toxin determinant C) (Toxin RTX-II-activating protein C)
ruditapes_c28269	toxin metabolic process	other metabolic processes	P	RTX-II toxin-activating lysine-acyltransferase ApxIIC (EC 2.3.1.-) (APX-IIC) (Cytolysin IIC) (CLY-IIC) (HLY-IIC) (RTX-II toxin determinant C) (Toxin RTX-II-activating protein C)
ruditapes_s38446	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_s38446	tricarboxylic acid cycle	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_s40217	protein transport	transport	P	Oligopeptide transport system permease protein AmiD
ruditapes_s40217	peptide transport	transport	P	Oligopeptide transport system permease protein AmiD
ruditapes_s40217	transport	transport	P	Oligopeptide transport system permease protein AmiD
ruditapes_c6914	DNA repair	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c6914	DNA repair	DNA metabolism	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c6914	ATP catabolic process	other metabolic processes	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c6914	response to DNA damage stimulus	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c6914	nucleotide-excision repair	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c6914	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c6914	SOS response	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c21986	phosphorylation	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c21986	organic acid metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c21986	metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c6420	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cold shock-like protein CspF (CSP-F)
ruditapes_c6420	"transcription, DNA-dependent"	RNA metabolism	P	Cold shock-like protein CspF (CSP-F)
ruditapes_c20262	oxidation reduction	other metabolic processes	P	Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
ruditapes_c20262	nitrate assimilation	other metabolic processes	P	Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
ruditapes_c20262	anaerobic respiration	other metabolic processes	P	Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
ruditapes_c16451	protein folding	protein metabolism	P	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (PPIase) (EC 5.2.1.8) (Metallochaperone SlyD)
ruditapes_c16451	protein peptidyl-prolyl isomerization	protein metabolism	P	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (PPIase) (EC 5.2.1.8) (Metallochaperone SlyD)
ruditapes_c19813	"transcription, DNA-dependent"	RNA metabolism	P	Cold-shock DEAD box protein A (EC 3.6.4.13) (ATP-dependent RNA helicase DeaD)
ruditapes_c19813	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cold-shock DEAD box protein A (EC 3.6.4.13) (ATP-dependent RNA helicase DeaD)
ruditapes_c14921	response to copper ion	other biological processes	P	Protein YobA
ruditapes_c14194	transport	transport	P	Putative arginine/ornithine antiporter
ruditapes_c14194	amino acid transport	transport	P	Putative arginine/ornithine antiporter
ruditapes_lrc36325	electron transport chain	other metabolic processes	P	"Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit (Anaerobic formate dehydrogenase iron-sulfur subunit) (Formate dehydrogenase-N subunit beta) (FDH-N subunit beta)"
ruditapes_lrc36325	transport	transport	P	"Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit (Anaerobic formate dehydrogenase iron-sulfur subunit) (Formate dehydrogenase-N subunit beta) (FDH-N subunit beta)"
ruditapes_lrc36325	cellular respiration	other metabolic processes	P	"Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit (Anaerobic formate dehydrogenase iron-sulfur subunit) (Formate dehydrogenase-N subunit beta) (FDH-N subunit beta)"
ruditapes_c14710	transport	transport	P	Miniconductance mechanosensitive channel
ruditapes_c14710	ion transport	transport	P	Miniconductance mechanosensitive channel
ruditapes_c14710	transmembrane transport	transport	P	Miniconductance mechanosensitive channel
ruditapes_c6709	"transcription, DNA-dependent"	RNA metabolism	P	Poly(A) polymerase I (PAP I) (EC 2.7.7.19) (Plasmid copy number protein)
ruditapes_c6709	RNA modification	RNA metabolism	P	Poly(A) polymerase I (PAP I) (EC 2.7.7.19) (Plasmid copy number protein)
ruditapes_c6709	RNA processing	RNA metabolism	P	Poly(A) polymerase I (PAP I) (EC 2.7.7.19) (Plasmid copy number protein)
ruditapes_c6709	mRNA polyadenylation	RNA metabolism	P	Poly(A) polymerase I (PAP I) (EC 2.7.7.19) (Plasmid copy number protein)
ruditapes_c6709	mRNA processing	RNA metabolism	P	Poly(A) polymerase I (PAP I) (EC 2.7.7.19) (Plasmid copy number protein)
ruditapes_c6709	plasmid maintenance	other biological processes	P	Poly(A) polymerase I (PAP I) (EC 2.7.7.19) (Plasmid copy number protein)
ruditapes_c26742	oxidation reduction	other metabolic processes	P	Hydrogenase-2 large chain (HYD2) (EC 1.12.99.6) (Membrane-bound hydrogenase 2 large subunit) (NiFe hydrogenase)
ruditapes2_c1904	oxidation reduction	other metabolic processes	P	Hydrogenase-2 large chain (HYD2) (EC 1.12.99.6) (Membrane-bound hydrogenase 2 large subunit) (NiFe hydrogenase)
ruditapes2_c2808	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator RutR (Rut operon repressor)
ruditapes2_c2808	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator RutR (Rut operon repressor)
ruditapes2_c2808	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator RutR (Rut operon repressor)
ruditapes2_c2808	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator RutR (Rut operon repressor)
ruditapes_c12415	two-component signal transduction system (phosphorelay)	signal transduction	P	Positive transcription regulator EvgA
ruditapes_c12415	"transcription, DNA-dependent"	RNA metabolism	P	Positive transcription regulator EvgA
ruditapes_c12415	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Positive transcription regulator EvgA
ruditapes_c13697	metabolic process	other metabolic processes	P	Probable phosphoribulokinase (PRK) (PRKase) (EC 2.7.1.19) (Phosphopentokinase)
ruditapes_c13697	carbohydrate metabolic process	other metabolic processes	P	Probable phosphoribulokinase (PRK) (PRKase) (EC 2.7.1.19) (Phosphopentokinase)
ruditapes_c13697	phosphorylation	other metabolic processes	P	Probable phosphoribulokinase (PRK) (PRKase) (EC 2.7.1.19) (Phosphopentokinase)
ruditapes2_c3024	tricarboxylic acid cycle	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes2_c3024	metabolic process	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes2_c3024	glycolysis	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes2_c3024	oxidation reduction	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c27378	transport	transport	P	Inner membrane ABC transporter permease protein YejB
ruditapes_c27378	microcin transport	transport	P	Inner membrane ABC transporter permease protein YejB
ruditapes2_c631	oxidation reduction	other metabolic processes	P	Uncharacterized protein YieF
ruditapes_c27006	DNA replication	DNA metabolism	P	DNA polymerase III subunit alpha (EC 2.7.7.7)
ruditapes_c28382	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Sensory/regulatory protein RpfC (EC 2.7.13.3)
ruditapes_c28382	pathogenesis	other biological processes	P	Sensory/regulatory protein RpfC (EC 2.7.13.3)
ruditapes_c28382	signal transduction	signal transduction	P	Sensory/regulatory protein RpfC (EC 2.7.13.3)
ruditapes_c28382	peptidyl-histidine phosphorylation	protein metabolism	P	Sensory/regulatory protein RpfC (EC 2.7.13.3)
ruditapes_c28382	"transcription, DNA-dependent"	RNA metabolism	P	Sensory/regulatory protein RpfC (EC 2.7.13.3)
ruditapes_c28382	two-component signal transduction system (phosphorelay)	signal transduction	P	Sensory/regulatory protein RpfC (EC 2.7.13.3)
ruditapes_c28382	phosphorylation	other metabolic processes	P	Sensory/regulatory protein RpfC (EC 2.7.13.3)
ruditapes_lrc22443	biological_process	other biological processes	P	Phosphoinositide 3-kinase regulatory subunit 4 (PI3-kinase regulatory subunit 4) (EC 2.7.11.1)
ruditapes_lrc22443	phosphorylation	other metabolic processes	P	Phosphoinositide 3-kinase regulatory subunit 4 (PI3-kinase regulatory subunit 4) (EC 2.7.11.1)
ruditapes_lrc22443	protein amino acid phosphorylation	protein metabolism	P	Phosphoinositide 3-kinase regulatory subunit 4 (PI3-kinase regulatory subunit 4) (EC 2.7.11.1)
ruditapes_c16383	oxygen transport	transport	P	Hemoglobin subunit alpha-A (Alpha-A-globin) (Hemoglobin alpha-A chain)
ruditapes_c16383	transport	transport	P	Hemoglobin subunit alpha-A (Alpha-A-globin) (Hemoglobin alpha-A chain)
ruditapes2_c225	signal transduction	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1)
ruditapes_c1382	synaptic transmission	cell-cell signaling	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1)
ruditapes2_c225	neuropeptide signaling pathway	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1)
ruditapes_c1382	neuropeptide signaling pathway	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1)
ruditapes2_c225	synaptic transmission	cell-cell signaling	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1)
ruditapes_c1382	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1)
ruditapes2_c225	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1)
ruditapes_c1382	activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1)
ruditapes_c1382	signal transduction	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1)
ruditapes2_c225	activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1)
ruditapes_c4789	cell cycle	cell cycle and proliferation	P	Chromosome transmission fidelity protein 18
ruditapes_c4789	DNA replication	DNA metabolism	P	Chromosome transmission fidelity protein 18
ruditapes_s37089	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase A1 (PPIase A1) (EC 5.2.1.8) (Cyclophilin A1) (Cyclosporin A-binding protein) (Rotamase A1)
ruditapes_s37089	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase A1 (PPIase A1) (EC 5.2.1.8) (Cyclophilin A1) (Cyclosporin A-binding protein) (Rotamase A1)
ruditapes2_c2138	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase A2 (PPIase A2) (EC 5.2.1.8) (Cyclophilin A2) (Cyclosporin A-binding protein) (Rotamase A2)
ruditapes2_c2138	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase A2 (PPIase A2) (EC 5.2.1.8) (Cyclophilin A2) (Cyclosporin A-binding protein) (Rotamase A2)
ruditapes_s38503	"transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein Hox-B2 (Homeobox protein Hox-2.8)
ruditapes_s38503	skeletal system morphogenesis	developmental processes	P	Homeobox protein Hox-B2 (Homeobox protein Hox-2.8)
ruditapes_s38503	rhombomere 4 development	developmental processes	P	Homeobox protein Hox-B2 (Homeobox protein Hox-2.8)
ruditapes_s38503	facial nerve structural organization	developmental processes	P	Homeobox protein Hox-B2 (Homeobox protein Hox-2.8)
ruditapes_s38503	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein Hox-B2 (Homeobox protein Hox-2.8)
ruditapes_s38503	anterior/posterior pattern formation	developmental processes	P	Homeobox protein Hox-B2 (Homeobox protein Hox-2.8)
ruditapes_s38503	neural nucleus development	other biological processes	P	Homeobox protein Hox-B2 (Homeobox protein Hox-2.8)
ruditapes_s38503	multicellular organismal development	developmental processes	P	Homeobox protein Hox-B2 (Homeobox protein Hox-2.8)
ruditapes_s38503	morphogenesis of an epithelial sheet	developmental processes	P	Homeobox protein Hox-B2 (Homeobox protein Hox-2.8)
ruditapes_s38503	rhombomere 3 development	developmental processes	P	Homeobox protein Hox-B2 (Homeobox protein Hox-2.8)
ruditapes_s38503	dorsal/ventral pattern formation	developmental processes	P	Homeobox protein Hox-B2 (Homeobox protein Hox-2.8)
ruditapes_s35803	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 (Ubiquitin A-52 residue ribosomal protein fusion product 1) [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52)]
ruditapes2_lrc5042	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 (Ubiquitin A-52 residue ribosomal protein fusion product 1) [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52)]
ruditapes2_lrc4924	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 (Ubiquitin A-52 residue ribosomal protein fusion product 1) [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52)]
ruditapes2_lrc5470	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 (Ubiquitin A-52 residue ribosomal protein fusion product 1) [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52)]
ruditapes2_lrc5109	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 (Ubiquitin A-52 residue ribosomal protein fusion product 1) [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52)]
ruditapes2_lrc4336	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 (Ubiquitin A-52 residue ribosomal protein fusion product 1) [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52)]
ruditapes_lrc34596	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 (Ubiquitin A-52 residue ribosomal protein fusion product 1) [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52)]
ruditapes_c14695	translation	protein metabolism	P	"39S ribosomal protein L22, mitochondrial (L22mt) (MRP-L22)"
ruditapes_c19304	protein transport	transport	P	Low calcium response locus protein D
ruditapes_c19304	transport	transport	P	Low calcium response locus protein D
ruditapes_c19304	pathogenesis	other biological processes	P	Low calcium response locus protein D
ruditapes_c19304	protein secretion	transport	P	Low calcium response locus protein D
ruditapes_lrc38321	interspecies interaction between organisms	other biological processes	P	Glycoprotein G (Fragment)
ruditapes_c11265	translation	protein metabolism	P	"30S ribosomal protein S14, chloroplastic"
ruditapes_c26760	dephosphorylation	other metabolic processes	P	Dual specificity phosphatase DUPD1 (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c26760	protein amino acid dephosphorylation	protein metabolism	P	Dual specificity phosphatase DUPD1 (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c20786	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase At1g18390 (EC 2.7.11.1)
ruditapes_c20786	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase At1g18390 (EC 2.7.11.1)
ruditapes_c7783	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 52
ruditapes_c7783	signal transduction	signal transduction	P	Probable G-protein coupled receptor 52
ruditapes_c7783	biological_process	other biological processes	P	Probable G-protein coupled receptor 52
ruditapes2_c1758	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes2_c1758	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes2_c1758	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c25832	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 13 (Lethal protein 19) (Mediator complex subunit 13)
ruditapes_c25832	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 13 (Lethal protein 19) (Mediator complex subunit 13)
ruditapes_c25832	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 13 (Lethal protein 19) (Mediator complex subunit 13)
ruditapes_c13483	protein amino acid phosphorylation	protein metabolism	P	Cyclin-dependent kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 8) (Mediator complex subunit cdk-8) (Mediator of RNA polymerase II transcription subunit cdk-8)
ruditapes_c13483	cell cycle	cell cycle and proliferation	P	Cyclin-dependent kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 8) (Mediator complex subunit cdk-8) (Mediator of RNA polymerase II transcription subunit cdk-8)
ruditapes_c13483	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclin-dependent kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 8) (Mediator complex subunit cdk-8) (Mediator of RNA polymerase II transcription subunit cdk-8)
ruditapes_c13483	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Cyclin-dependent kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 8) (Mediator complex subunit cdk-8) (Mediator of RNA polymerase II transcription subunit cdk-8)
ruditapes_c13483	"transcription, DNA-dependent"	RNA metabolism	P	Cyclin-dependent kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 8) (Mediator complex subunit cdk-8) (Mediator of RNA polymerase II transcription subunit cdk-8)
ruditapes_c13483	phosphorylation	other metabolic processes	P	Cyclin-dependent kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 8) (Mediator complex subunit cdk-8) (Mediator of RNA polymerase II transcription subunit cdk-8)
ruditapes_c9628	cell adhesion	cell adhesion	P	Immunoglobulin superfamily member 11 (IgSF11) (Brain and testis-specific immunoglobulin superfamily protein) (Bt-IGSF)
ruditapes_c9628	regulation of growth	other biological processes	P	Immunoglobulin superfamily member 11 (IgSF11) (Brain and testis-specific immunoglobulin superfamily protein) (Bt-IGSF)
ruditapes_c6343	blood coagulation	stress response	P	Disintegrin VB7B
ruditapes_c6343	cell adhesion	cell adhesion	P	Disintegrin VB7B
ruditapes_c2269	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes_c2269	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes_c2269	ubiquitin-dependent protein catabolic process	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes_c2269	RNA metabolic process	RNA metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes_c2269	viral reproduction	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes_c10959	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes_c10959	viral reproduction	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes_c10959	RNA metabolic process	RNA metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes2_c782	RNA metabolic process	RNA metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes2_c782	viral reproduction	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes_c10959	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes2_c782	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes2_c782	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9)]
ruditapes_c14256	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c14256	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c29506	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c14256	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c14256	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c14256	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c29506	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c29506	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c29506	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c29506	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c4836	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); Non-structural protein 11 (nsp11)]
ruditapes_c21908	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); Non-structural protein 11 (nsp11)]
ruditapes_c4836	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); Non-structural protein 11 (nsp11)]
ruditapes_c4836	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); Non-structural protein 11 (nsp11)]
ruditapes_c21908	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); Non-structural protein 11 (nsp11)]
ruditapes_c4836	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); Non-structural protein 11 (nsp11)]
ruditapes_c21908	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); Non-structural protein 11 (nsp11)]
ruditapes_c4836	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); Non-structural protein 11 (nsp11)]
ruditapes_c21908	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); Non-structural protein 11 (nsp11)]
ruditapes_c21908	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); Non-structural protein 11 (nsp11)]
ruditapes_c4831	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c4831	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c4831	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c10668	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c4831	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c10668	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c4831	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c10668	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c10668	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c10668	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes2_c3637	proteolysis	protein metabolism	P	Non-structural polyprotein 1A [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine protease p27 (p27) (EC 3.4.21.-); Protein p20']
ruditapes2_c3637	RNA biosynthetic process	RNA metabolism	P	Non-structural polyprotein 1A [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine protease p27 (p27) (EC 3.4.21.-); Protein p20']
ruditapes_c16728	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c16728	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c16728	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c16728	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c16728	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c10699	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c16891	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c26642	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c14365	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c26642	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c14365	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c10699	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c14365	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c10699	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c10699	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c14365	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c16891	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c26642	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c16891	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c10699	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c26642	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c14365	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c26642	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c16891	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c16891	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c15017	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_lrc33780	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c15017	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_lrc33780	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c15017	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c15017	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_lrc33780	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c15017	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_lrc33780	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_lrc33780	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c25867	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); Non-structural protein 11 (nsp11)]
ruditapes_c25867	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); Non-structural protein 11 (nsp11)]
ruditapes_c25867	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); Non-structural protein 11 (nsp11)]
ruditapes_c25867	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); Non-structural protein 11 (nsp11)]
ruditapes_c25867	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); Non-structural protein 11 (nsp11)]
ruditapes_c13360	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); Non-structural protein 11 (nsp11)]
ruditapes_c13360	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); Non-structural protein 11 (nsp11)]
ruditapes_c13360	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); Non-structural protein 11 (nsp11)]
ruditapes_c13360	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); Non-structural protein 11 (nsp11)]
ruditapes_c13360	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); Non-structural protein 11 (nsp11)]
ruditapes_c7962	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c7962	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c7962	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c7962	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c7962	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
ruditapes_c4959	viral genome replication	other biological processes	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO) (p195); Non-structural protein 4 (nsp4) (Peptide HD2) (p41); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p33); Non-structural protein 6 (nsp6) (p34); Non-structural protein 7 (nsp7) (p9); Non-structural protein 8 (nsp8) (p24); Non-structural protein 9 (nsp9) (p10); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p16); Non-structural protein 11 (nsp11)]
ruditapes_c4959	viral protein processing	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO) (p195); Non-structural protein 4 (nsp4) (Peptide HD2) (p41); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p33); Non-structural protein 6 (nsp6) (p34); Non-structural protein 7 (nsp7) (p9); Non-structural protein 8 (nsp8) (p24); Non-structural protein 9 (nsp9) (p10); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p16); Non-structural protein 11 (nsp11)]
ruditapes_c4959	proteolysis	protein metabolism	P	Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO) (p195); Non-structural protein 4 (nsp4) (Peptide HD2) (p41); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p33); Non-structural protein 6 (nsp6) (p34); Non-structural protein 7 (nsp7) (p9); Non-structural protein 8 (nsp8) (p24); Non-structural protein 9 (nsp9) (p10); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p16); Non-structural protein 11 (nsp11)]
ruditapes_c13894	ubiquitin-dependent protein catabolic process	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c13894	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c9353	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c23708	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c9353	viral reproduction	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c9353	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c9353	ubiquitin-dependent protein catabolic process	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c13894	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c13894	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c23708	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c23708	RNA metabolic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c23708	viral reproduction	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c23708	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c23708	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c23708	ubiquitin-dependent protein catabolic process	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c13894	RNA metabolic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c13894	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c13894	viral reproduction	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c13894	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c9353	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c9353	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c13894	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c23708	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c23708	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c9353	RNA metabolic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c9353	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c9353	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes2_lrc5426	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes2_lrc5426	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes2_lrc5426	RNA metabolic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes2_lrc5426	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes2_lrc5426	viral reproduction	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes2_lrc5426	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes2_lrc5426	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes2_lrc5426	ubiquitin-dependent protein catabolic process	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes2_lrc5426	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); Non-structural protein 2 (nsp2); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (M-PRO) (nsp3) (p27); Non-structural protein 4 (nsp4); Non-structural protein 5 (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp10) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp11) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp12); Non-structural protein 13 (nsp13); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp14); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp15)]
ruditapes_c19426	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c19426	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c19426	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c19426	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c19426	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c19426	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c19426	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c19426	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_s36765	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_s36765	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_s36765	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_s36765	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_s36765	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_s36765	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_s36765	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_s36765	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c460	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c460	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c460	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c460	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c460	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c460	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c460	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c460	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c36371	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c36371	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c36371	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c36371	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c36371	regulation of Rho protein signal transduction	signal transduction	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c36371	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c36371	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c36371	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c36371	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c9513	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c22223	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc35214	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc4708	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c9513	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc31871	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc35214	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc35214	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc5322	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc35214	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c9513	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc5322	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc35214	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc4708	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c22223	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc5322	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c22223	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc31871	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc4708	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc35214	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc5322	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc5322	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc4708	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc4708	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc31871	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c9513	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c9513	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc31871	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c22223	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc5322	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c9513	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc31871	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c22223	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c22223	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc35214	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc35214	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc5322	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc4708	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc31871	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc5322	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc4708	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c9513	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c22223	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c22223	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc31871	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c9513	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_lrc4708	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc31871	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p41); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c2228	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c2228	regulation of Rho protein signal transduction	signal transduction	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c2228	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c2228	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c2228	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c2228	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c2228	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c2228	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes2_c2228	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p28); Non-structural protein 2 (nsp2) (p65); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL1-PRO/PL2-PRO) (PL1/PL2) (Papain-like proteinases 1/2) (p210); Non-structural protein 4 (nsp4) (Peptide HD2) (p44); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p27); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p10); Non-structural protein 8 (nsp8) (p22); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p15); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p67); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15) (p35); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c18999	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c18999	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c18999	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c8822	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c8822	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c18999	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c8822	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c8822	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c8822	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c18999	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c18999	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c8822	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c8822	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c8822	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c18999	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c18999	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c16560	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c16560	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c16560	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c16560	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c16560	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c16560	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c16560	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c16560	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (p9); Non-structural protein 2 (nsp2) (p87); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5) (p34); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7) (p5); Non-structural protein 8 (nsp8) (p23); Non-structural protein 9 (nsp9) (p12); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL) (p14); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12) (p100); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13) (p66) (p66-HEL); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_lrc32518	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_s33716	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes2_lrc4156	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_s34464	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_lrc33432	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_s39923	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_s37325	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_lrc32320	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_lrc33523	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_lrc36285	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_lrc11644	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes2_lrc6297	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_s38093	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_s32586	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_lrc32673	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_s35971	pathogenesis	other biological processes	P	Omega-conotoxin-like S6.6
ruditapes_c18107	oxidation reduction	other metabolic processes	P	NAD(P)H-quinone oxidoreductase subunit L (EC 1.6.5.-) (NAD(P)H dehydrogenase I subunit L) (NDH-1 subunit L) (NDH-L)
ruditapes_c18107	transport	transport	P	NAD(P)H-quinone oxidoreductase subunit L (EC 1.6.5.-) (NAD(P)H dehydrogenase I subunit L) (NDH-1 subunit L) (NDH-L)
ruditapes_c14781	biological_process	other biological processes	P	"Pentatricopeptide repeat-containing protein At4g19191, mitochondrial"
ruditapes_c11628	lipid catabolic process	other metabolic processes	P	Lysophospholipase 1 (EC 3.1.1.5) (Phospholipase B 1)
ruditapes_c11628	phospholipid catabolic process	other metabolic processes	P	Lysophospholipase 1 (EC 3.1.1.5) (Phospholipase B 1)
ruditapes_c11628	metabolic process	other metabolic processes	P	Lysophospholipase 1 (EC 3.1.1.5) (Phospholipase B 1)
ruditapes_c31885	"transcription, DNA-dependent"	RNA metabolism	P	Probable DNA-directed RNA polymerase subunit 1 homolog (EC 2.7.7.6)
ruditapes_c12588	DNA repair	stress response	P	Probable AP endonuclease (APE) (EC 3.1.21.-)
ruditapes_c12588	DNA repair	DNA metabolism	P	Probable AP endonuclease (APE) (EC 3.1.21.-)
ruditapes_c12588	response to DNA damage stimulus	stress response	P	Probable AP endonuclease (APE) (EC 3.1.21.-)
ruditapes_c9256	metabolic process	other metabolic processes	P	NifS-like protein
ruditapes_c1164	taxis	other biological processes	P	Protein MGF 360-8L
ruditapes_c16372	taxis	other biological processes	P	Protein MGF 360-9L
ruditapes_s40043	taxis	other biological processes	P	Protein MGF 360-11L
ruditapes_c25816	taxis	other biological processes	P	Protein MGF 360-21R
ruditapes_c19263	taxis	other biological processes	P	Protein MGF 360-21R
ruditapes_c3135	transport	transport	P	Solute carrier family 25 member 38-B
ruditapes_c3135	erythrocyte differentiation	developmental processes	P	Solute carrier family 25 member 38-B
ruditapes_c3135	transmembrane transport	transport	P	Solute carrier family 25 member 38-B
ruditapes2_c4989	cell cycle	cell cycle and proliferation	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes2_c4989	cell division	other biological processes	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes2_c4989	protein folding	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes2_c4989	protein peptidyl-prolyl isomerization	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes2_c4989	protein transport	transport	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c53	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c2583	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c2583	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c53	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c2583	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c53	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c2828	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c2828	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c2828	response to oxidative stress	stress response	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c2828	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c2828	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c29345	signal transduction	signal transduction	P	Growth factor receptor-bound protein 10 (GRB10 adapter protein)
ruditapes_c29345	negative regulation of glycogen biosynthetic process	other metabolic processes	P	Growth factor receptor-bound protein 10 (GRB10 adapter protein)
ruditapes_c29345	insulin receptor signaling pathway	signal transduction	P	Growth factor receptor-bound protein 10 (GRB10 adapter protein)
ruditapes_c29345	biological_process	other biological processes	P	Growth factor receptor-bound protein 10 (GRB10 adapter protein)
ruditapes_c29345	response to insulin stimulus	other biological processes	P	Growth factor receptor-bound protein 10 (GRB10 adapter protein)
ruditapes_c29345	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Growth factor receptor-bound protein 10 (GRB10 adapter protein)
ruditapes_c29345	positive regulation of vascular endothelial growth factor receptor signaling pathway	signal transduction	P	Growth factor receptor-bound protein 10 (GRB10 adapter protein)
ruditapes_c29345	positive regulation of phosphorylation	other metabolic processes	P	Growth factor receptor-bound protein 10 (GRB10 adapter protein)
ruditapes_lrc28490	metabolic process	other metabolic processes	P	Putative uncharacterized protein YPL276W
ruditapes_c1770	oxidation reduction	other metabolic processes	P	Putative uncharacterized protein YPL276W
ruditapes_c1770	metabolic process	other metabolic processes	P	Putative uncharacterized protein YPL276W
ruditapes_lrc28490	oxidation reduction	other metabolic processes	P	Putative uncharacterized protein YPL276W
ruditapes_c21940	response to arsenic	other biological processes	P	Putative arsenate reductase-like protein
ruditapes_c21940	oxidation reduction	other metabolic processes	P	Putative arsenate reductase-like protein
ruditapes_s37442	cytolysis	death	P	Thrombin-like enzyme bhalternin (SVTLE) (EC 3.4.21.-) (Fibrinogen-clotting enzyme) (Snake venom serine protease) (SVSP)
ruditapes_s37442	proteolysis	protein metabolism	P	Thrombin-like enzyme bhalternin (SVTLE) (EC 3.4.21.-) (Fibrinogen-clotting enzyme) (Snake venom serine protease) (SVSP)
ruditapes_s37442	blood coagulation	stress response	P	Thrombin-like enzyme bhalternin (SVTLE) (EC 3.4.21.-) (Fibrinogen-clotting enzyme) (Snake venom serine protease) (SVSP)
ruditapes_c19669	cell cycle	cell cycle and proliferation	P	Chromosome transmission fidelity protein 8 homolog
ruditapes_c19669	DNA replication	DNA metabolism	P	Chromosome transmission fidelity protein 8 homolog
ruditapes_c28222	transport	transport	P	Cation/H(+) antiporter 6B (Protein CATION/H+ EXCHANGER 6b) (AtCHX6b)
ruditapes_c28222	ion transport	transport	P	Cation/H(+) antiporter 6B (Protein CATION/H+ EXCHANGER 6b) (AtCHX6b)
ruditapes_c28222	cation transport	transport	P	Cation/H(+) antiporter 6B (Protein CATION/H+ EXCHANGER 6b) (AtCHX6b)
ruditapes_c28222	potassium ion transport	transport	P	Cation/H(+) antiporter 6B (Protein CATION/H+ EXCHANGER 6b) (AtCHX6b)
ruditapes_c28222	transmembrane transport	transport	P	Cation/H(+) antiporter 6B (Protein CATION/H+ EXCHANGER 6b) (AtCHX6b)
ruditapes_c9042	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 883
ruditapes_c9042	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 883
ruditapes_s37628	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-15B
ruditapes_s37628	sequestering of actin monomers	protein metabolism	P	Thymosin beta-15B
ruditapes_s37628	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-15B
ruditapes2_c2649	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-15B
ruditapes2_c2649	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-15B
ruditapes2_c2649	sequestering of actin monomers	protein metabolism	P	Thymosin beta-15B
ruditapes_s37628	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-15B
ruditapes2_c2649	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-15B
ruditapes_lrc28238	DNA repair	stress response	P	Polyubiquitin [Cleaved into: Ubiquitin-related; Ubiquitin]
ruditapes_lrc28238	DNA repair	DNA metabolism	P	Polyubiquitin [Cleaved into: Ubiquitin-related; Ubiquitin]
ruditapes_lrc28238	response to DNA damage stimulus	stress response	P	Polyubiquitin [Cleaved into: Ubiquitin-related; Ubiquitin]
ruditapes_c16060	Wnt receptor signaling pathway	signal transduction	P	Nephrocystin-3
ruditapes_c7447	Wnt receptor signaling pathway	signal transduction	P	Nephrocystin-3
ruditapes_c22893	Wnt receptor signaling pathway	signal transduction	P	Nephrocystin-3
ruditapes2_c2625	iron ion transport	transport	P	Ferritin (EC 1.16.3.1)
ruditapes2_c2625	oxidation reduction	other metabolic processes	P	Ferritin (EC 1.16.3.1)
ruditapes2_c2625	cellular iron ion homeostasis	other biological processes	P	Ferritin (EC 1.16.3.1)
ruditapes_c9417	"spread of virus within host, cell to cell"	other biological processes	P	P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Movement protein P3N-PIPO (Pretty interesting potyviridae ORF) (PIPO)]
ruditapes_c9417	transport	transport	P	P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Movement protein P3N-PIPO (Pretty interesting potyviridae ORF) (PIPO)]
ruditapes_c29115	"spread of virus within host, cell to cell"	other biological processes	P	P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Movement protein P3N-PIPO (Pretty interesting potyviridae ORF) (PIPO)]
ruditapes_c29115	transport	transport	P	P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Movement protein P3N-PIPO (Pretty interesting potyviridae ORF) (PIPO)]
ruditapes_c24851	transport	transport	P	P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Movement protein P3N-PIPO (Pretty interesting potyviridae ORF) (PIPO)]
ruditapes_c24851	"spread of virus within host, cell to cell"	other biological processes	P	P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Movement protein P3N-PIPO (Pretty interesting potyviridae ORF) (PIPO)]
ruditapes_c15567	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Accessory protein p30II
ruditapes_c15567	"transcription, DNA-dependent"	RNA metabolism	P	Accessory protein p30II
ruditapes_c15567	apoptosis	death	P	Accessory protein p30II
ruditapes2_c1558	regulation of protein secretion	transport	P	Chaperone protein sicP
ruditapes2_c1558	pathogenesis	other biological processes	P	Chaperone protein sicP
ruditapes2_c6831	gluconeogenesis	other metabolic processes	P	"Acetate non-utilizing protein 9, mitochondrial"
ruditapes_lrc24601	cell division	other biological processes	P	Cofilin (Actin-depolymerizing factor 1)
ruditapes_lrc24601	cell cycle	cell cycle and proliferation	P	Cofilin (Actin-depolymerizing factor 1)
ruditapes_c2348	transport	transport	P	Chitin synthase export chaperone
ruditapes_c2348	cell wall organization	cell organization and biogenesis	P	Chitin synthase export chaperone
ruditapes_c2348	protein transport	transport	P	Chitin synthase export chaperone
ruditapes_c9103	DNA ligation during DNA repair	stress response	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c9103	DNA ligation during DNA repair	DNA metabolism	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c9103	DNA repair	stress response	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c9103	DNA repair	DNA metabolism	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c9103	response to DNA damage stimulus	stress response	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c9103	DNA replication	DNA metabolism	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c9103	DNA recombination	DNA metabolism	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c15342	oxidation reduction	other metabolic processes	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_c15342	"transcription, DNA-dependent"	RNA metabolism	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_c15342	chromatin modification	cell organization and biogenesis	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_c15342	"regulation of transcription, DNA-dependent"	RNA metabolism	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_c15342	histone H3-K36 demethylation	protein metabolism	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_c15342	histone H3-K36 demethylation	cell organization and biogenesis	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_c16879	double-strand break repair via nonhomologous end joining	stress response	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70)
ruditapes_c16879	double-strand break repair via nonhomologous end joining	DNA metabolism	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70)
ruditapes_c16879	DNA recombination	DNA metabolism	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70)
ruditapes_c16879	DNA repair	stress response	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70)
ruditapes_c16879	DNA repair	DNA metabolism	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70)
ruditapes_c16879	response to DNA damage stimulus	stress response	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70)
ruditapes_c6508	oxidation reduction	other metabolic processes	P	Probable NADPH reductase TAH18 (EC 1.-.-.-)
ruditapes_s38559	rRNA processing	RNA metabolism	P	Nucleolar protein 58
ruditapes_s38559	ribosome biogenesis	other biological processes	P	Nucleolar protein 58
ruditapes_c14884	conjugation	other biological processes	P	Plasma membrane fusion protein PRM1
ruditapes_c19954	protein transport	transport	P	Cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related protein 4)
ruditapes_c19954	transport	transport	P	Cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related protein 4)
ruditapes_c19954	proteolysis	protein metabolism	P	Cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related protein 4)
ruditapes_c19954	autophagy	other metabolic processes	P	Cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related protein 4)
ruditapes_c8222	DNA replication	DNA metabolism	P	DNA replication complex GINS protein PSF3
ruditapes_c25741	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor CWC2
ruditapes_c25741	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor CWC2
ruditapes_c25741	cell cycle	cell cycle and proliferation	P	Pre-mRNA-splicing factor CWC2
ruditapes_c25032	transcription initiation from RNA polymerase II promoter	RNA metabolism	P	Transcription initiation factor IIA subunit 2 (General transcription factor IIA subunit 2) (Transcription initiation factor IIA small chain)
ruditapes_c25032	transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	Transcription initiation factor IIA subunit 2 (General transcription factor IIA subunit 2) (Transcription initiation factor IIA small chain)
ruditapes_c25032	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor IIA subunit 2 (General transcription factor IIA subunit 2) (Transcription initiation factor IIA small chain)
ruditapes_c25032	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor IIA subunit 2 (General transcription factor IIA subunit 2) (Transcription initiation factor IIA small chain)
ruditapes_c14453	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase STE7 homolog (EC 2.7.12.2)
ruditapes_c14453	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase STE7 homolog (EC 2.7.12.2)
ruditapes_c19884	proteolysis	protein metabolism	P	Candidapepsin-1 (EC 3.4.23.24) (ACP 1) (Aspartate protease 1) (Secreted aspartic protease 1)
ruditapes_c18649	phosphorylation	other metabolic processes	P	Epidermal growth factor receptor (Egfr) (EC 2.7.10.1)
ruditapes_c18649	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Epidermal growth factor receptor (Egfr) (EC 2.7.10.1)
ruditapes_c18649	multicellular organismal development	developmental processes	P	Epidermal growth factor receptor (Egfr) (EC 2.7.10.1)
ruditapes_c18649	protein amino acid phosphorylation	protein metabolism	P	Epidermal growth factor receptor (Egfr) (EC 2.7.10.1)
ruditapes_c12758	pathogenesis	other biological processes	P	Conotoxin Bu4
ruditapes_c28601	fatty acid metabolic process	other metabolic processes	P	"Acyl-coenzyme A oxidase 3, peroxisomal (AOX 3) (Acyl-CoA oxidase 3) (EC 1.3.3.6) (Medium-chain acyl-CoA oxidase) (AtCX3)"
ruditapes_c28601	fatty acid beta-oxidation	other metabolic processes	P	"Acyl-coenzyme A oxidase 3, peroxisomal (AOX 3) (Acyl-CoA oxidase 3) (EC 1.3.3.6) (Medium-chain acyl-CoA oxidase) (AtCX3)"
ruditapes_c28601	lipid metabolic process	other metabolic processes	P	"Acyl-coenzyme A oxidase 3, peroxisomal (AOX 3) (Acyl-CoA oxidase 3) (EC 1.3.3.6) (Medium-chain acyl-CoA oxidase) (AtCX3)"
ruditapes_c28601	metabolic process	other metabolic processes	P	"Acyl-coenzyme A oxidase 3, peroxisomal (AOX 3) (Acyl-CoA oxidase 3) (EC 1.3.3.6) (Medium-chain acyl-CoA oxidase) (AtCX3)"
ruditapes_c28601	oxidation reduction	other metabolic processes	P	"Acyl-coenzyme A oxidase 3, peroxisomal (AOX 3) (Acyl-CoA oxidase 3) (EC 1.3.3.6) (Medium-chain acyl-CoA oxidase) (AtCX3)"
ruditapes_lrc36004	protein refolding	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes_lrc36004	cellular protein metabolic process	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes_lrc36004	protein folding	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes_c28183	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28183	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28183	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28183	biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28183	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28183	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28183	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c27869	lactose metabolic process	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes_c27869	carbohydrate metabolic process	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes_c27869	lactose catabolic process via tagatose-6-phosphate	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes_c27869	phosphorylation	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes_c12209	tryptophanyl-tRNA aminoacylation	protein metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_c12209	tryptophanyl-tRNA aminoacylation	RNA metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_c12209	translation	protein metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_c12209	tRNA aminoacylation for protein translation	protein metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_c12209	tRNA aminoacylation for protein translation	RNA metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_lrc16783	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 26 (Zfp-26) (Protein mKR3)
ruditapes2_c134	transcription from RNA polymerase III promoter	RNA metabolism	P	60 kDa SS-A/Ro ribonucleoprotein (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (Ro 60 kDa autoantigen) (Sjoegren syndrome antigen A2) (Sjoegren syndrome type A antigen) (SS-A) (TROVE domain family member 2)
ruditapes2_c3109	transcription from RNA polymerase III promoter	RNA metabolism	P	60 kDa SS-A/Ro ribonucleoprotein (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (Ro 60 kDa autoantigen) (Sjoegren syndrome antigen A2) (Sjoegren syndrome type A antigen) (SS-A) (TROVE domain family member 2)
ruditapes_c1148	transcription from RNA polymerase III promoter	RNA metabolism	P	60 kDa SS-A/Ro ribonucleoprotein (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (Ro 60 kDa autoantigen) (Sjoegren syndrome antigen A2) (Sjoegren syndrome type A antigen) (SS-A) (TROVE domain family member 2)
ruditapes_c11917	transcription from RNA polymerase III promoter	RNA metabolism	P	60 kDa SS-A/Ro ribonucleoprotein (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (Ro 60 kDa autoantigen) (Sjoegren syndrome antigen A2) (Sjoegren syndrome type A antigen) (SS-A) (TROVE domain family member 2)
ruditapes_lrc29003	transport	transport	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_lrc29003	translation	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_lrc29003	mRNA transport	transport	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_lrc29003	translational frameshifting	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_lrc29003	peptidyl-lysine modification to hypusine	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_lrc29003	protein transport	transport	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_lrc29003	positive regulation of translational termination	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_lrc29003	positive regulation of translational termination	cell organization and biogenesis	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_lrc29003	apoptosis	death	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_lrc29003	positive regulation of translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_lrc29003	positive regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_lrc29003	translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)
ruditapes_c24860	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein HB3 (Fragment)
ruditapes_c24860	multicellular organismal development	developmental processes	P	Homeobox protein HB3 (Fragment)
ruditapes2_c3967	negative regulation of peptidase activity	other biological processes	P	Ovoinhibitor
ruditapes_c12371	DNA packaging	cell organization and biogenesis	P	Portal protein UL6
ruditapes_c24314	negative regulation of peptidase activity	other biological processes	P	Kunitz-type proteinase inhibitor 5 II (SA5 II)
ruditapes_c7844	oxidation reduction	other metabolic processes	P	Xanthine dehydrogenase (XD) (EC 1.17.1.4) (Protein rosy locus)
ruditapes_c7844	tryptophan metabolic process	other metabolic processes	P	Xanthine dehydrogenase (XD) (EC 1.17.1.4) (Protein rosy locus)
ruditapes_c7844	glycerophospholipid metabolic process	other metabolic processes	P	Xanthine dehydrogenase (XD) (EC 1.17.1.4) (Protein rosy locus)
ruditapes_c7844	compound eye pigmentation	other biological processes	P	Xanthine dehydrogenase (XD) (EC 1.17.1.4) (Protein rosy locus)
ruditapes_c7844	purine base metabolic process	other metabolic processes	P	Xanthine dehydrogenase (XD) (EC 1.17.1.4) (Protein rosy locus)
ruditapes_c7844	arginine metabolic process	other metabolic processes	P	Xanthine dehydrogenase (XD) (EC 1.17.1.4) (Protein rosy locus)
ruditapes_c7844	xanthine catabolic process	other metabolic processes	P	Xanthine dehydrogenase (XD) (EC 1.17.1.4) (Protein rosy locus)
ruditapes_c7844	pyrimidine base metabolic process	other metabolic processes	P	Xanthine dehydrogenase (XD) (EC 1.17.1.4) (Protein rosy locus)
ruditapes_c7844	determination of adult life span	developmental processes	P	Xanthine dehydrogenase (XD) (EC 1.17.1.4) (Protein rosy locus)
ruditapes_c26855	enterobactin biosynthetic process	other metabolic processes	P	"Enterobactin synthase component E (Enterochelin synthase E) [Includes: 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58) (Dihydroxybenzoic acid-activating enzyme); S-dihydroxybenzoyltransferase (EC 2.3.1.-)]"
ruditapes_c26855	metabolic process	other metabolic processes	P	"Enterobactin synthase component E (Enterochelin synthase E) [Includes: 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58) (Dihydroxybenzoic acid-activating enzyme); S-dihydroxybenzoyltransferase (EC 2.3.1.-)]"
ruditapes_c26855	siderophore biosynthetic process	other metabolic processes	P	"Enterobactin synthase component E (Enterochelin synthase E) [Includes: 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58) (Dihydroxybenzoic acid-activating enzyme); S-dihydroxybenzoyltransferase (EC 2.3.1.-)]"
ruditapes_c23165	proteolysis	protein metabolism	P	Protease (EC 3.4.22.39) (Adenain) (Adenovirus protease) (AVP) (Adenovirus proteinase) (Endoprotease)
ruditapes_c21198	DNA integration	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c9444	proteolysis	protein metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c9444	DNA integration	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c13538	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c10393	DNA integration	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c9444	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c10393	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c10393	proteolysis	protein metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c21198	proteolysis	protein metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c13538	DNA integration	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c13538	proteolysis	protein metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c10093	DNA integration	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c10093	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c21198	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c10093	proteolysis	protein metabolism	P	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c14669	viral infectious cycle	other biological processes	P	MLV-related proviral Env polyprotein [Cleaved into: Surface protein (SU); Transmembrane protein (TM)]
ruditapes_c11822	polysaccharide catabolic process	other metabolic processes	P	Beta-glucosidase A (EC 3.2.1.21) (Amygdalase) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase)
ruditapes_c11822	metabolic process	other metabolic processes	P	Beta-glucosidase A (EC 3.2.1.21) (Amygdalase) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase)
ruditapes_c11822	cellulose catabolic process	other metabolic processes	P	Beta-glucosidase A (EC 3.2.1.21) (Amygdalase) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase)
ruditapes_c11822	carbohydrate metabolic process	other metabolic processes	P	Beta-glucosidase A (EC 3.2.1.21) (Amygdalase) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase)
ruditapes_c13277	DNA integration	DNA metabolism	P	Shufflon-specific DNA recombinase
ruditapes_c13277	DNA recombination	DNA metabolism	P	Shufflon-specific DNA recombinase
ruditapes_c3216	glomerular basement membrane development	developmental processes	P	Nidogen-1 (NID-1) (Entactin)
ruditapes_c3216	glomerular basement membrane development	cell organization and biogenesis	P	Nidogen-1 (NID-1) (Entactin)
ruditapes_c3216	extracellular matrix organization	cell organization and biogenesis	P	Nidogen-1 (NID-1) (Entactin)
ruditapes_c3216	cell-matrix adhesion	cell adhesion	P	Nidogen-1 (NID-1) (Entactin)
ruditapes_c3216	cell adhesion	cell adhesion	P	Nidogen-1 (NID-1) (Entactin)
ruditapes_c3216	positive regulation of cell-substrate adhesion	cell adhesion	P	Nidogen-1 (NID-1) (Entactin)
ruditapes_c10210	negative regulation of heart contraction	other biological processes	P	FMRFamide-related peptides [Cleaved into: FMRFamide A; Corticotropin-releasing factor-like; AAMDRY-amide; DPKQDFMRF-amide; TPAEDFMRF-amide; SDNFMRF-amide; SPKQDFMRF-amide; PDNFMRF-amide; SAPQDFVRS-amide; MDSNFIRF-amide]
ruditapes_c10210	neuropeptide signaling pathway	signal transduction	P	FMRFamide-related peptides [Cleaved into: FMRFamide A; Corticotropin-releasing factor-like; AAMDRY-amide; DPKQDFMRF-amide; TPAEDFMRF-amide; SDNFMRF-amide; SPKQDFMRF-amide; PDNFMRF-amide; SAPQDFVRS-amide; MDSNFIRF-amide]
ruditapes_c18205	positive regulation of apoptosis	death	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	cell adhesion	cell adhesion	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	negative regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	negative regulation of nerve growth factor receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	negative regulation of cytokine-mediated signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	regulation of synapse structure and activity	cell-cell signaling	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	positive regulation of dendrite morphogenesis	developmental processes	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	negative regulation of insulin receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	nervous system development	developmental processes	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	homophilic cell adhesion	cell adhesion	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	negative regulation of cell projection organization	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	negative regulation of cell proliferation	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	transmembrane receptor protein tyrosine phosphatase signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c18205	positive regulation of neuron apoptosis	death	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes2_c5362	respiratory electron transport chain	other metabolic processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes2_c3760	respiratory gaseous exchange	other biological processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes2_c5313	respiratory gaseous exchange	other biological processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes_lrc32289	respiratory gaseous exchange	other biological processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes_lrc35533	respiratory electron transport chain	other metabolic processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes_lrc32190	respiratory gaseous exchange	other biological processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes_lrc35533	respiratory gaseous exchange	other biological processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes_lrc32190	respiratory electron transport chain	other metabolic processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes_lrc32289	respiratory electron transport chain	other metabolic processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes2_c3760	respiratory electron transport chain	other metabolic processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes2_c5362	respiratory gaseous exchange	other biological processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes2_c5313	respiratory electron transport chain	other metabolic processes	P	"Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide Vb)"
ruditapes_c34955	response to organic nitrogen	other biological processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c6317	response to lipopolysaccharide	other biological processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c6317	xenobiotic metabolic process	other metabolic processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes2_c72	protein homotrimerization	cell organization and biogenesis	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c34955	response to drug	other biological processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes2_c72	Leydig cell differentiation	developmental processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes2_c72	response to drug	other biological processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c6317	response to organic nitrogen	other biological processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes2_c72	response to organic nitrogen	other biological processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c6317	glutathione metabolic process	other metabolic processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c6317	Leydig cell differentiation	developmental processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c34955	response to lipopolysaccharide	other biological processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c34955	protein homotrimerization	cell organization and biogenesis	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes2_c72	response to lipopolysaccharide	other biological processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c34955	glutathione metabolic process	other metabolic processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c6317	protein homotrimerization	cell organization and biogenesis	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c6317	response to drug	other biological processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c34955	xenobiotic metabolic process	other metabolic processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes2_c72	glutathione metabolic process	other metabolic processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes2_c72	xenobiotic metabolic process	other metabolic processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_c34955	Leydig cell differentiation	developmental processes	P	Microsomal glutathione S-transferase 1 (Microsomal GST-1) (EC 2.5.1.18) (Microsomal GST-I)
ruditapes_lrc14510	activation of adenylate cyclase activity	other metabolic processes	P	Acrosin (EC 3.4.21.10) [Cleaved into: Acrosin light chain; Acrosin heavy chain] (Fragment)
ruditapes_lrc14510	single fertilization	other biological processes	P	Acrosin (EC 3.4.21.10) [Cleaved into: Acrosin light chain; Acrosin heavy chain] (Fragment)
ruditapes_lrc14510	penetration of zona pellucida	other biological processes	P	Acrosin (EC 3.4.21.10) [Cleaved into: Acrosin light chain; Acrosin heavy chain] (Fragment)
ruditapes_lrc14510	proteolysis	protein metabolism	P	Acrosin (EC 3.4.21.10) [Cleaved into: Acrosin light chain; Acrosin heavy chain] (Fragment)
ruditapes_lrc14510	acrosome reaction	other biological processes	P	Acrosin (EC 3.4.21.10) [Cleaved into: Acrosin light chain; Acrosin heavy chain] (Fragment)
ruditapes_s35425	cell adhesion	cell adhesion	P	Fasciclin-1 (Fasciclin I) (FAS I) (FCN)
ruditapes_c13635	interspecies interaction between organisms	other biological processes	P	Secretory glycoprotein GP57-65 (A antigen) (Glycoprotein A) (GA)
ruditapes_c10842	phosphorylation	other metabolic processes	P	"Alkaline phosphatase, placental-like (EC 3.1.3.1) (ALP-1) (Alkaline phosphatase Nagao isozyme) (Germ cell alkaline phosphatase) (GCAP) (Placental alkaline phosphatase-like) (PLAP-like)"
ruditapes_c10842	dephosphorylation	other metabolic processes	P	"Alkaline phosphatase, placental-like (EC 3.1.3.1) (ALP-1) (Alkaline phosphatase Nagao isozyme) (Germ cell alkaline phosphatase) (GCAP) (Placental alkaline phosphatase-like) (PLAP-like)"
ruditapes_c10842	metabolic process	other metabolic processes	P	"Alkaline phosphatase, placental-like (EC 3.1.3.1) (ALP-1) (Alkaline phosphatase Nagao isozyme) (Germ cell alkaline phosphatase) (GCAP) (Placental alkaline phosphatase-like) (PLAP-like)"
ruditapes_c21584	translation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS) (Potentially protective 63 kDa antigen)"
ruditapes_c21584	tRNA aminoacylation for protein translation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS) (Potentially protective 63 kDa antigen)"
ruditapes_c21584	tRNA aminoacylation for protein translation	RNA metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS) (Potentially protective 63 kDa antigen)"
ruditapes_c21584	asparaginyl-tRNA aminoacylation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS) (Potentially protective 63 kDa antigen)"
ruditapes_c21584	asparaginyl-tRNA aminoacylation	RNA metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS) (Potentially protective 63 kDa antigen)"
ruditapes_c10140	response to hypoxia	stress response	P	"40S ribosomal protein S12, mitochondrial (MRP-S12) (S12mt) (MT-RPS12) (Protein technical knockout locus)"
ruditapes_c10140	mechanosensory behavior	other biological processes	P	"40S ribosomal protein S12, mitochondrial (MRP-S12) (S12mt) (MT-RPS12) (Protein technical knockout locus)"
ruditapes_c10140	male courtship behavior	other biological processes	P	"40S ribosomal protein S12, mitochondrial (MRP-S12) (S12mt) (MT-RPS12) (Protein technical knockout locus)"
ruditapes_c10140	response to mechanical stimulus	other biological processes	P	"40S ribosomal protein S12, mitochondrial (MRP-S12) (S12mt) (MT-RPS12) (Protein technical knockout locus)"
ruditapes_c10140	translation	protein metabolism	P	"40S ribosomal protein S12, mitochondrial (MRP-S12) (S12mt) (MT-RPS12) (Protein technical knockout locus)"
ruditapes_c10140	sensory perception of sound	other biological processes	P	"40S ribosomal protein S12, mitochondrial (MRP-S12) (S12mt) (MT-RPS12) (Protein technical knockout locus)"
ruditapes_c10140	courtship behavior	other biological processes	P	"40S ribosomal protein S12, mitochondrial (MRP-S12) (S12mt) (MT-RPS12) (Protein technical knockout locus)"
ruditapes_c14981	cell division	other biological processes	P	G2/mitotic-specific cyclin cdc13
ruditapes_c14981	mitosis	cell cycle and proliferation	P	G2/mitotic-specific cyclin cdc13
ruditapes_c14981	mitosis	cell organization and biogenesis	P	G2/mitotic-specific cyclin cdc13
ruditapes_c14981	regulation of cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin cdc13
ruditapes_c14981	microtubule cytoskeleton organization	cell organization and biogenesis	P	G2/mitotic-specific cyclin cdc13
ruditapes_c14981	signal transduction	signal transduction	P	G2/mitotic-specific cyclin cdc13
ruditapes_c14981	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	G2/mitotic-specific cyclin cdc13
ruditapes_c14981	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	G2/mitotic-specific cyclin cdc13
ruditapes_c14981	cellular protein localization	other biological processes	P	G2/mitotic-specific cyclin cdc13
ruditapes_c14981	negative regulation of G0 to G1 transition	cell cycle and proliferation	P	G2/mitotic-specific cyclin cdc13
ruditapes_c14981	cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin cdc13
ruditapes_c14981	regulation of G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin cdc13
ruditapes_c20441	pathogenesis	other biological processes	P	Botulinum neurotoxin type B (BoNT/B) (EC 3.4.24.69) (Bontoxilysin-B) [Cleaved into: Botulinum neurotoxin B light chain; Botulinum neurotoxin B heavy chain]
ruditapes_c20441	inhibition of neurotransmitter uptake	transport	P	Botulinum neurotoxin type B (BoNT/B) (EC 3.4.24.69) (Bontoxilysin-B) [Cleaved into: Botulinum neurotoxin B light chain; Botulinum neurotoxin B heavy chain]
ruditapes_c20441	neurotransmitter secretion	cell-cell signaling	P	Botulinum neurotoxin type B (BoNT/B) (EC 3.4.24.69) (Bontoxilysin-B) [Cleaved into: Botulinum neurotoxin B light chain; Botulinum neurotoxin B heavy chain]
ruditapes_c20441	proteolysis	protein metabolism	P	Botulinum neurotoxin type B (BoNT/B) (EC 3.4.24.69) (Bontoxilysin-B) [Cleaved into: Botulinum neurotoxin B light chain; Botulinum neurotoxin B heavy chain]
ruditapes_c20441	synaptic transmission	cell-cell signaling	P	Botulinum neurotoxin type B (BoNT/B) (EC 3.4.24.69) (Bontoxilysin-B) [Cleaved into: Botulinum neurotoxin B light chain; Botulinum neurotoxin B heavy chain]
ruditapes_c20441	neurotransmitter secretion	transport	P	Botulinum neurotoxin type B (BoNT/B) (EC 3.4.24.69) (Bontoxilysin-B) [Cleaved into: Botulinum neurotoxin B light chain; Botulinum neurotoxin B heavy chain]
ruditapes_c20441	inhibition of neurotransmitter uptake	cell-cell signaling	P	Botulinum neurotoxin type B (BoNT/B) (EC 3.4.24.69) (Bontoxilysin-B) [Cleaved into: Botulinum neurotoxin B light chain; Botulinum neurotoxin B heavy chain]
ruditapes_c15819	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase 2 (EC 1.1.1.1)
ruditapes_c29010	tRNA aminoacylation for protein translation	protein metabolism	P	"Leucine--tRNA ligase, cytoplasmic (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)"
ruditapes_c29010	tRNA aminoacylation for protein translation	RNA metabolism	P	"Leucine--tRNA ligase, cytoplasmic (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)"
ruditapes_c29010	leucyl-tRNA aminoacylation	protein metabolism	P	"Leucine--tRNA ligase, cytoplasmic (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)"
ruditapes_c29010	leucyl-tRNA aminoacylation	RNA metabolism	P	"Leucine--tRNA ligase, cytoplasmic (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)"
ruditapes_c29010	translation	protein metabolism	P	"Leucine--tRNA ligase, cytoplasmic (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)"
ruditapes_c25579	defense response	stress response	P	Phormicin (Insect defensin A/B)
ruditapes_c25579	innate immune response	stress response	P	Phormicin (Insect defensin A/B)
ruditapes_c25579	defense response to bacterium	stress response	P	Phormicin (Insect defensin A/B)
ruditapes_c18315	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-CoA carboxylase (ACC) (EC 6.4.1.2) [Includes: Biotin carboxylase (EC 6.3.4.14)]
ruditapes_c18315	metabolic process	other metabolic processes	P	Acetyl-CoA carboxylase (ACC) (EC 6.4.1.2) [Includes: Biotin carboxylase (EC 6.3.4.14)]
ruditapes_c18315	lipid biosynthetic process	other metabolic processes	P	Acetyl-CoA carboxylase (ACC) (EC 6.4.1.2) [Includes: Biotin carboxylase (EC 6.3.4.14)]
ruditapes_s36065	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Galectin-1 (Gal-1) (14 kDa lectin) (Beta-galactoside-binding lectin L-14-I) (Galaptin) (Lactose-binding lectin 1) (Lectin galactoside-binding soluble 1) (S-Lac lectin 1)
ruditapes_s36065	signal transduction	signal transduction	P	Galectin-1 (Gal-1) (14 kDa lectin) (Beta-galactoside-binding lectin L-14-I) (Galaptin) (Lactose-binding lectin 1) (Lectin galactoside-binding soluble 1) (S-Lac lectin 1)
ruditapes_s36065	myoblast differentiation	developmental processes	P	Galectin-1 (Gal-1) (14 kDa lectin) (Beta-galactoside-binding lectin L-14-I) (Galaptin) (Lactose-binding lectin 1) (Lectin galactoside-binding soluble 1) (S-Lac lectin 1)
ruditapes_c26131	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-1 chain
ruditapes_c26131	microtubule-based movement	other biological processes	P	Tubulin alpha-1 chain
ruditapes_c26131	GTP catabolic process	other metabolic processes	P	Tubulin alpha-1 chain
ruditapes_c26131	microtubule-based process	other biological processes	P	Tubulin alpha-1 chain
ruditapes_c13823	embryonic development	developmental processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c3564	reproduction	other biological processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c13823	nematode larval development	developmental processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c3564	growth	other biological processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c3564	embryonic development	developmental processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c3564	positive regulation of growth rate	other biological processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c13823	growth	other biological processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c3564	embryonic development ending in birth or egg hatching	developmental processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c13823	determination of adult life span	developmental processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c13823	reproduction	other biological processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c13823	response to stress	stress response	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c3564	protein folding	protein metabolism	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c3564	endoplasmic reticulum unfolded protein response	signal transduction	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c3564	endoplasmic reticulum unfolded protein response	stress response	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c13823	endoplasmic reticulum unfolded protein response	signal transduction	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c13823	endoplasmic reticulum unfolded protein response	stress response	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c13823	protein folding	protein metabolism	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c3564	response to stress	stress response	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c3564	nematode larval development	developmental processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c13823	positive regulation of growth rate	other biological processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c13823	embryonic development ending in birth or egg hatching	developmental processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c3564	determination of adult life span	developmental processes	P	"Heat shock 70 kDa protein F, mitochondrial"
ruditapes_c39751	reverse cholesterol transport	transport	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	triglyceride catabolic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	cholesterol homeostasis	other biological processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	chylomicron remnant clearance	cell organization and biogenesis	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	intermediate-density lipoprotein particle remodeling	cell organization and biogenesis	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	phosphatidylcholine catabolic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	lipid catabolic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	low-density lipoprotein particle remodeling	cell organization and biogenesis	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	triglyceride homeostasis	other biological processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	lipid metabolic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	metabolic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	cholesterol transport	transport	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	very-low-density lipoprotein particle remodeling	cell organization and biogenesis	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	cholesterol metabolic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	fatty acid biosynthetic process	other metabolic processes	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c39751	high-density lipoprotein particle remodeling	cell organization and biogenesis	P	Hepatic triacylglycerol lipase (HL) (Hepatic lipase) (EC 3.1.1.3) (Lipase member C)
ruditapes_c10400	phosphorylation	other metabolic processes	P	"Pyruvate, phosphate dikinase 1, chloroplastic (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase 1)"
ruditapes_c10400	photosynthesis	other metabolic processes	P	"Pyruvate, phosphate dikinase 1, chloroplastic (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase 1)"
ruditapes_c10400	response to light stimulus	other biological processes	P	"Pyruvate, phosphate dikinase 1, chloroplastic (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase 1)"
ruditapes_c10400	starch biosynthetic process	other metabolic processes	P	"Pyruvate, phosphate dikinase 1, chloroplastic (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase 1)"
ruditapes_c10400	lipid biosynthetic process	other metabolic processes	P	"Pyruvate, phosphate dikinase 1, chloroplastic (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase 1)"
ruditapes_s34982	transmembrane transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 1 (Glucose transporter type 1, erythrocyte/brain) (GLUT-1)"
ruditapes_s34982	glucose transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 1 (Glucose transporter type 1, erythrocyte/brain) (GLUT-1)"
ruditapes_s34982	carbohydrate transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 1 (Glucose transporter type 1, erythrocyte/brain) (GLUT-1)"
ruditapes_s34982	response to osmotic stress	stress response	P	"Solute carrier family 2, facilitated glucose transporter member 1 (Glucose transporter type 1, erythrocyte/brain) (GLUT-1)"
ruditapes_s34982	xenobiotic transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 1 (Glucose transporter type 1, erythrocyte/brain) (GLUT-1)"
ruditapes_s34982	cellular response to glucose starvation	stress response	P	"Solute carrier family 2, facilitated glucose transporter member 1 (Glucose transporter type 1, erythrocyte/brain) (GLUT-1)"
ruditapes_s34982	transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 1 (Glucose transporter type 1, erythrocyte/brain) (GLUT-1)"
ruditapes_c24135	leukocyte migration	other biological processes	P	Integrin alpha-M (CD11 antigen-like family member B) (CR-3 alpha chain) (Cell surface glycoprotein MAC-1 subunit alpha) (Leukocyte adhesion receptor MO1) (Neutrophil adherence receptor) (CD antigen CD11b)
ruditapes_c24135	blood coagulation	stress response	P	Integrin alpha-M (CD11 antigen-like family member B) (CR-3 alpha chain) (Cell surface glycoprotein MAC-1 subunit alpha) (Leukocyte adhesion receptor MO1) (Neutrophil adherence receptor) (CD antigen CD11b)
ruditapes_c24135	cell adhesion	cell adhesion	P	Integrin alpha-M (CD11 antigen-like family member B) (CR-3 alpha chain) (Cell surface glycoprotein MAC-1 subunit alpha) (Leukocyte adhesion receptor MO1) (Neutrophil adherence receptor) (CD antigen CD11b)
ruditapes_c24135	integrin-mediated signaling pathway	signal transduction	P	Integrin alpha-M (CD11 antigen-like family member B) (CR-3 alpha chain) (Cell surface glycoprotein MAC-1 subunit alpha) (Leukocyte adhesion receptor MO1) (Neutrophil adherence receptor) (CD antigen CD11b)
ruditapes_c17473	membrane fusion	cell organization and biogenesis	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c17473	pathogenesis	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c17473	interspecies interaction between organisms	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c17473	viral envelope fusion with host membrane	cell organization and biogenesis	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c17473	"virion attachment, binding of host cell surface receptor"	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c26803	"cytoadherence to microvasculature, mediated by parasite protein"	other biological processes	P	Adhesin P1 (Attachment protein) (Cytadhesin P1)
ruditapes_c16042	evasion of host defenses by virus	other biological processes	P	Early E3 15.3 kDa protein
ruditapes_c7632	regulation of defense response to virus by virus	stress response	P	Early E3 18.5 kDa glycoprotein (E3-19K) (E3gp 19 kDa) (E19) (Early E3 19.2 kDa glycoprotein) (GP19K)
ruditapes_c7632	interspecies interaction between organisms	other biological processes	P	Early E3 18.5 kDa glycoprotein (E3-19K) (E3gp 19 kDa) (E19) (Early E3 19.2 kDa glycoprotein) (GP19K)
ruditapes_c7632	evasion by virus of host immune response	stress response	P	Early E3 18.5 kDa glycoprotein (E3-19K) (E3gp 19 kDa) (E19) (Early E3 19.2 kDa glycoprotein) (GP19K)
ruditapes_c648	response to lead ion	other biological processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c648	oxidation reduction	other metabolic processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c648	tetrahydrobiopterin biosynthetic process	other metabolic processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c648	metabolic process	other metabolic processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c648	response to aluminum ion	other biological processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c648	L-phenylalanine catabolic process	other metabolic processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c648	liver development	developmental processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c648	response to glucagon stimulus	other biological processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c19911	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein LINE-1 (Long interspersed element-1) (L1) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c17285	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein LINE-1 (Long interspersed element-1) (L1) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c19276	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein LINE-1 (Long interspersed element-1) (L1) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c1607	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein LINE-1 (Long interspersed element-1) (L1) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c8272	oxidation reduction	other metabolic processes	P	Cytochrome P450 2C4 (EC 1.14.14.1) (CYPIIC4) (Cytochrome P450 PBc4) (P1-88) (Progesterone 21-hydroxylase)
ruditapes_c4812	oxidation reduction	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_c4812	glucose metabolic process	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_c4812	carbohydrate metabolic process	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_c7910	autophagic cell death	death	P	Lysosome-associated membrane glycoprotein 1 (LAMP-1) (Lysosome-associated membrane protein 1) (120 kDa lysosomal membrane glycoprotein) (CD107 antigen-like family member A) (LGP-120) (Lysosomal membrane glycoprotein A) (LGP-A) (P2B) (CD antigen CD107a)
ruditapes_c7910	spermatogenesis	other biological processes	P	Lysosome-associated membrane glycoprotein 1 (LAMP-1) (Lysosome-associated membrane protein 1) (120 kDa lysosomal membrane glycoprotein) (CD107 antigen-like family member A) (LGP-120) (Lysosomal membrane glycoprotein A) (LGP-A) (P2B) (CD antigen CD107a)
ruditapes_c12857	autophagy	other metabolic processes	P	Lysosome-associated membrane glycoprotein 1 (LAMP-1) (Lysosome-associated membrane protein 1) (120 kDa lysosomal membrane glycoprotein) (CD107 antigen-like family member A) (LGP-120) (Lysosomal membrane glycoprotein A) (LGP-A) (P2B) (CD antigen CD107a)
ruditapes_c12857	spermatogenesis	other biological processes	P	Lysosome-associated membrane glycoprotein 1 (LAMP-1) (Lysosome-associated membrane protein 1) (120 kDa lysosomal membrane glycoprotein) (CD107 antigen-like family member A) (LGP-120) (Lysosomal membrane glycoprotein A) (LGP-A) (P2B) (CD antigen CD107a)
ruditapes_c12857	autophagic cell death	death	P	Lysosome-associated membrane glycoprotein 1 (LAMP-1) (Lysosome-associated membrane protein 1) (120 kDa lysosomal membrane glycoprotein) (CD107 antigen-like family member A) (LGP-120) (Lysosomal membrane glycoprotein A) (LGP-A) (P2B) (CD antigen CD107a)
ruditapes_c7910	autophagy	other metabolic processes	P	Lysosome-associated membrane glycoprotein 1 (LAMP-1) (Lysosome-associated membrane protein 1) (120 kDa lysosomal membrane glycoprotein) (CD107 antigen-like family member A) (LGP-120) (Lysosomal membrane glycoprotein A) (LGP-A) (P2B) (CD antigen CD107a)
ruditapes_c16679	transport	transport	P	Cation-dependent mannose-6-phosphate receptor (CD Man-6-P receptor) (CD-MPR) (46 kDa mannose 6-phosphate receptor) (MPR 46)
ruditapes_c16679	mannose transport	transport	P	Cation-dependent mannose-6-phosphate receptor (CD Man-6-P receptor) (CD-MPR) (46 kDa mannose 6-phosphate receptor) (MPR 46)
ruditapes_c24456	female pregnancy	other biological processes	P	Pregnancy-specific beta-1-glycoprotein 2 (PS-beta-G-2) (PSBG-2) (Pregnancy-specific glycoprotein 2) (Pregnancy-specific beta-1 glycoprotein E) (PS-beta-E)
ruditapes_c24456	cell migration	other biological processes	P	Pregnancy-specific beta-1-glycoprotein 2 (PS-beta-G-2) (PSBG-2) (Pregnancy-specific glycoprotein 2) (Pregnancy-specific beta-1 glycoprotein E) (PS-beta-E)
ruditapes_c16423	multicellular organismal development	developmental processes	P	RING finger protein DG17 (Probable TNF receptor-associated factor DDB
ruditapes_c16423	protein ubiquitination	protein metabolism	P	RING finger protein DG17 (Probable TNF receptor-associated factor DDB
ruditapes_c1745	response to virus	other biological processes	P	Neutrophil cationic peptide 1 type A (GNCP-1A) [Cleaved into: Neutrophil cationic peptide 1 (Corticostatic peptide GP-CS1) (CP-1) (GPNP) (Neutrophil defensin)]
ruditapes_c1745	defense response	stress response	P	Neutrophil cationic peptide 1 type A (GNCP-1A) [Cleaved into: Neutrophil cationic peptide 1 (Corticostatic peptide GP-CS1) (CP-1) (GPNP) (Neutrophil defensin)]
ruditapes_c1745	killing of cells of another organism	other biological processes	P	Neutrophil cationic peptide 1 type A (GNCP-1A) [Cleaved into: Neutrophil cationic peptide 1 (Corticostatic peptide GP-CS1) (CP-1) (GPNP) (Neutrophil defensin)]
ruditapes_c1745	defense response to bacterium	stress response	P	Neutrophil cationic peptide 1 type A (GNCP-1A) [Cleaved into: Neutrophil cationic peptide 1 (Corticostatic peptide GP-CS1) (CP-1) (GPNP) (Neutrophil defensin)]
ruditapes_c1745	defense response to fungus	stress response	P	Neutrophil cationic peptide 1 type A (GNCP-1A) [Cleaved into: Neutrophil cationic peptide 1 (Corticostatic peptide GP-CS1) (CP-1) (GPNP) (Neutrophil defensin)]
ruditapes2_c258	protein folding	protein metabolism	P	Heat shock protein HSP 90-alpha
ruditapes_c3931	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	Heat shock protein HSP 90-alpha
ruditapes_c3931	response to stress	stress response	P	Heat shock protein HSP 90-alpha
ruditapes_c4265	protein folding	protein metabolism	P	Heat shock protein HSP 90-alpha
ruditapes2_lrc4275	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	Heat shock protein HSP 90-alpha
ruditapes_c4548	protein folding	protein metabolism	P	Heat shock protein HSP 90-alpha
ruditapes2_c3117	protein folding	protein metabolism	P	Heat shock protein HSP 90-alpha
ruditapes2_lrc4275	response to stress	stress response	P	Heat shock protein HSP 90-alpha
ruditapes2_c3117	response to stress	stress response	P	Heat shock protein HSP 90-alpha
ruditapes_c4548	response to stress	stress response	P	Heat shock protein HSP 90-alpha
ruditapes2_c3117	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	Heat shock protein HSP 90-alpha
ruditapes2_lrc4275	protein folding	protein metabolism	P	Heat shock protein HSP 90-alpha
ruditapes_c4265	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	Heat shock protein HSP 90-alpha
ruditapes_c4548	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	Heat shock protein HSP 90-alpha
ruditapes2_c258	response to stress	stress response	P	Heat shock protein HSP 90-alpha
ruditapes_c1528	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	Heat shock protein HSP 90-alpha
ruditapes2_c258	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	Heat shock protein HSP 90-alpha
ruditapes_c3931	protein folding	protein metabolism	P	Heat shock protein HSP 90-alpha
ruditapes_c1528	protein folding	protein metabolism	P	Heat shock protein HSP 90-alpha
ruditapes_c4265	response to stress	stress response	P	Heat shock protein HSP 90-alpha
ruditapes_c1528	response to stress	stress response	P	Heat shock protein HSP 90-alpha
ruditapes_c30308	response to stress	stress response	P	Heat shock 70 kDa protein (HSP70) (Fragment)
ruditapes2_c2531	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit A'' (Subunit C) (EC 2.7.7.6)
ruditapes_c23803	methanogenesis	other metabolic processes	P	Methyl-coenzyme M reductase operon protein D
ruditapes_c9996	RNA-dependent DNA replication	DNA metabolism	P	Reverse transcriptase-like protein
ruditapes_c24749	hydrogen peroxide catabolic process	stress response	P	Eosinophil peroxidase (EPO) (EC 1.11.1.7) [Cleaved into: Eosinophil peroxidase light chain; Eosinophil peroxidase heavy chain]
ruditapes_c24749	hydrogen peroxide catabolic process	other metabolic processes	P	Eosinophil peroxidase (EPO) (EC 1.11.1.7) [Cleaved into: Eosinophil peroxidase light chain; Eosinophil peroxidase heavy chain]
ruditapes_c24749	response to oxidative stress	stress response	P	Eosinophil peroxidase (EPO) (EC 1.11.1.7) [Cleaved into: Eosinophil peroxidase light chain; Eosinophil peroxidase heavy chain]
ruditapes_c24749	oxidation reduction	other metabolic processes	P	Eosinophil peroxidase (EPO) (EC 1.11.1.7) [Cleaved into: Eosinophil peroxidase light chain; Eosinophil peroxidase heavy chain]
ruditapes2_c3205	lipid transport	transport	P	Apolipoprotein B (Fragment)
ruditapes2_c3205	transport	transport	P	Apolipoprotein B (Fragment)
ruditapes2_c3205	steroid metabolic process	other metabolic processes	P	Apolipoprotein B (Fragment)
ruditapes2_c3205	lipid metabolic process	other metabolic processes	P	Apolipoprotein B (Fragment)
ruditapes2_c3205	cholesterol metabolic process	other metabolic processes	P	Apolipoprotein B (Fragment)
ruditapes_c31506	cell-substrate junction assembly	cell organization and biogenesis	P	Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
ruditapes_c31506	cell-cell adhesion mediated by integrin	cell adhesion	P	Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
ruditapes_c31506	positive regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
ruditapes_c31506	"wound healing, spreading of epidermal cells"	stress response	P	Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
ruditapes_c31506	heterophilic cell adhesion	cell adhesion	P	Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
ruditapes_c31506	cell adhesion	cell adhesion	P	Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
ruditapes_c31506	memory	other biological processes	P	Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
ruditapes_c31506	integrin-mediated signaling pathway	signal transduction	P	Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
ruditapes_c31506	leukocyte adhesion	cell adhesion	P	Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
ruditapes_lrc37934	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc37934	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc37934	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc37934	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc37934	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c1518	negative regulation of microtubule polymerization	protein metabolism	P	Nuclear fusion protein BIK1
ruditapes_c1518	negative regulation of microtubule polymerization	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	mitosis	cell cycle and proliferation	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	mitosis	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	mitotic anaphase B	cell cycle and proliferation	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	mitotic anaphase B	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	karyogamy during conjugation with cellular fusion	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	mitotic spindle elongation	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes_c1518	karyogamy during conjugation with cellular fusion	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes_c1518	mitotic spindle elongation	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	cell cycle	cell cycle and proliferation	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	mitotic spindle elongation	cell cycle and proliferation	P	Nuclear fusion protein BIK1
ruditapes_c1518	mitotic anaphase B	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	mitotic spindle organization in nucleus	cell cycle and proliferation	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	mitotic spindle organization in nucleus	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes_c1518	cell cycle	cell cycle and proliferation	P	Nuclear fusion protein BIK1
ruditapes_c1518	mitotic spindle elongation	cell cycle and proliferation	P	Nuclear fusion protein BIK1
ruditapes_c1518	nuclear migration during conjugation with cellular fusion	transport	P	Nuclear fusion protein BIK1
ruditapes_c1518	nuclear migration during conjugation with cellular fusion	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes_c1518	mitotic anaphase B	cell cycle and proliferation	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	negative regulation of microtubule polymerization	protein metabolism	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	negative regulation of microtubule polymerization	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes_c1518	mitosis	cell cycle and proliferation	P	Nuclear fusion protein BIK1
ruditapes_c1518	mitosis	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	cell division	other biological processes	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	nuclear migration during conjugation with cellular fusion	transport	P	Nuclear fusion protein BIK1
ruditapes2_lrc2955	nuclear migration during conjugation with cellular fusion	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes_c1518	mitotic spindle organization in nucleus	cell cycle and proliferation	P	Nuclear fusion protein BIK1
ruditapes_c1518	mitotic spindle organization in nucleus	cell organization and biogenesis	P	Nuclear fusion protein BIK1
ruditapes_c1518	cell division	other biological processes	P	Nuclear fusion protein BIK1
ruditapes_c12102	transport	transport	P	Cation-independent mannose-6-phosphate receptor (CI Man-6-P receptor) (CI-MPR) (M6PR) (300 kDa mannose 6-phosphate receptor) (MPR 300) (Insulin-like growth factor 2 receptor) (Insulin-like growth factor II receptor) (IGF-II receptor) (M6P/IGF2 receptor) (M6P/IGF2R) (CD antigen CD222)
ruditapes_c12102	receptor-mediated endocytosis	transport	P	Cation-independent mannose-6-phosphate receptor (CI Man-6-P receptor) (CI-MPR) (M6PR) (300 kDa mannose 6-phosphate receptor) (MPR 300) (Insulin-like growth factor 2 receptor) (Insulin-like growth factor II receptor) (IGF-II receptor) (M6P/IGF2 receptor) (M6P/IGF2R) (CD antigen CD222)
ruditapes_c12102	receptor-mediated endocytosis	cell organization and biogenesis	P	Cation-independent mannose-6-phosphate receptor (CI Man-6-P receptor) (CI-MPR) (M6PR) (300 kDa mannose 6-phosphate receptor) (MPR 300) (Insulin-like growth factor 2 receptor) (Insulin-like growth factor II receptor) (IGF-II receptor) (M6P/IGF2 receptor) (M6P/IGF2R) (CD antigen CD222)
ruditapes_c12102	insulin-like growth factor receptor signaling pathway	signal transduction	P	Cation-independent mannose-6-phosphate receptor (CI Man-6-P receptor) (CI-MPR) (M6PR) (300 kDa mannose 6-phosphate receptor) (MPR 300) (Insulin-like growth factor 2 receptor) (Insulin-like growth factor II receptor) (IGF-II receptor) (M6P/IGF2 receptor) (M6P/IGF2R) (CD antigen CD222)
ruditapes_c12102	signal transduction	signal transduction	P	Cation-independent mannose-6-phosphate receptor (CI Man-6-P receptor) (CI-MPR) (M6PR) (300 kDa mannose 6-phosphate receptor) (MPR 300) (Insulin-like growth factor 2 receptor) (Insulin-like growth factor II receptor) (IGF-II receptor) (M6P/IGF2 receptor) (M6P/IGF2R) (CD antigen CD222)
ruditapes_c14785	ion transport	transport	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes2_c805	proton transport	transport	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes_c14785	proton transport	transport	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes2_c805	ion transport	transport	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes2_c805	transport	transport	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes2_c805	ATP catabolic process	other metabolic processes	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes_c14785	ATP catabolic process	other metabolic processes	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes_c14785	transport	transport	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes_c14785	metabolic process	other metabolic processes	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes_c14785	cation transport	transport	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes2_c805	cation transport	transport	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes2_c805	ATP biosynthetic process	other metabolic processes	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes2_c805	metabolic process	other metabolic processes	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes_c14785	ATP biosynthetic process	other metabolic processes	P	Probable proton ATPase 1A (EC 3.6.3.6) (LdH1A)
ruditapes2_c2561	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 13 (Function unknown 81 protein) (TAFII-19) (TAFII19) (TBP-associated factor 13) (TBP-associated factor 19 kDa)
ruditapes2_c2561	transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription initiation factor TFIID subunit 13 (Function unknown 81 protein) (TAFII-19) (TAFII19) (TBP-associated factor 13) (TBP-associated factor 19 kDa)
ruditapes2_c2561	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 13 (Function unknown 81 protein) (TAFII-19) (TAFII19) (TBP-associated factor 13) (TBP-associated factor 19 kDa)
ruditapes2_c2561	transcriptional preinitiation complex assembly	RNA metabolism	P	Transcription initiation factor TFIID subunit 13 (Function unknown 81 protein) (TAFII-19) (TAFII19) (TBP-associated factor 13) (TBP-associated factor 19 kDa)
ruditapes2_c2561	transcriptional preinitiation complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 13 (Function unknown 81 protein) (TAFII-19) (TAFII19) (TBP-associated factor 13) (TBP-associated factor 19 kDa)
ruditapes_c10145	cell adhesion	cell adhesion	P	Fimbrial protein P9-2 (Pilin)
ruditapes2_c4168	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin)
ruditapes2_c4168	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin)
ruditapes2_c4168	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin)
ruditapes2_c4168	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin)
ruditapes_c205	proteolysis	protein metabolism	P	Endothiapepsin (EC 3.4.23.22) (Aspartate protease)
ruditapes_c10148	transport	transport	P	Tctex1 domain-containing protein 3 (LC2) (T-complex testis-specific protein 2) (T-complex testis-specific protein 3) (T-complex-associated testis-expressed protein 3) (Tcte-3) (T-complex-associated testis-expressed protein 4) (TCTEX-4) (TCTEX-2)
ruditapes_lrc8460	translation	protein metabolism	P	60S ribosomal protein L18
ruditapes2_lrc6520	respiratory electron transport chain	other metabolic processes	P	"Cytochrome c oxidase subunit 6A1, mitochondrial (Cytochrome c oxidase polypeptide VIa-liver) (Cytochrome c oxidase subunit VIA-liver) (COX VIa-L)"
ruditapes2_lrc6520	generation of precursor metabolites and energy	other metabolic processes	P	"Cytochrome c oxidase subunit 6A1, mitochondrial (Cytochrome c oxidase polypeptide VIa-liver) (Cytochrome c oxidase subunit VIA-liver) (COX VIa-L)"
ruditapes2_lrc4613	respiratory electron transport chain	other metabolic processes	P	"Cytochrome c oxidase subunit 6A1, mitochondrial (Cytochrome c oxidase polypeptide VIa-liver) (Cytochrome c oxidase subunit VIA-liver) (COX VIa-L)"
ruditapes2_lrc4613	generation of precursor metabolites and energy	other metabolic processes	P	"Cytochrome c oxidase subunit 6A1, mitochondrial (Cytochrome c oxidase polypeptide VIa-liver) (Cytochrome c oxidase subunit VIA-liver) (COX VIa-L)"
ruditapes_c24663	muscle organ development	developmental processes	P	Collagen alpha-3(VI) chain
ruditapes_c24663	cell adhesion	cell adhesion	P	Collagen alpha-3(VI) chain
ruditapes_c24663	axon guidance	cell organization and biogenesis	P	Collagen alpha-3(VI) chain
ruditapes_c24663	response to glucose stimulus	other biological processes	P	Collagen alpha-3(VI) chain
ruditapes_c24663	negative regulation of peptidase activity	other biological processes	P	Collagen alpha-3(VI) chain
ruditapes_c24663	axon guidance	developmental processes	P	Collagen alpha-3(VI) chain
ruditapes_c5129	transport	transport	P	"Phosphate carrier protein, mitochondrial (Phosphate transport protein) (PTP) (Solute carrier family 25 member 3)"
ruditapes_c4025	translation	protein metabolism	P	Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)
ruditapes_c4025	translational elongation	protein metabolism	P	Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)
ruditapes_c30408	metabolic process	other metabolic processes	P	"Arylamine N-acetyltransferase, liver isozyme (Arylamine acetylase) (EC 2.3.1.5)"
ruditapes_c27486	metabolic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment)"
ruditapes_c27486	biosynthetic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment)"
ruditapes_c27486	starch biosynthetic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment)"
ruditapes_c27486	glycogen biosynthetic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment)"
ruditapes_c14685	activation of JUN kinase activity	signal transduction	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	activation of JUN kinase activity	stress response	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	activation of JUN kinase activity	protein metabolism	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	positive regulation of mast cell degranulation	transport	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	immune response	other biological processes	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	cell surface receptor linked signal transduction	signal transduction	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	serotonin secretion	transport	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	serotonin secretion	cell-cell signaling	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	leukotriene biosynthetic process	other metabolic processes	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	positive regulation of calcium-mediated signaling	signal transduction	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	positive regulation of granulocyte macrophage colony-stimulating factor biosynthetic process	other metabolic processes	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	positive regulation of interleukin-3 biosynthetic process	other metabolic processes	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	positive regulation of type I hypersensitivity	stress response	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	positive regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	signal transduction	signal transduction	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	activation of MAPK activity	signal transduction	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c14685	activation of MAPK activity	protein metabolism	P	High affinity immunoglobulin epsilon receptor subunit alpha (Fc-epsilon RI-alpha) (FcERI) (IgE Fc receptor subunit alpha)
ruditapes_c1632	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein (GP) (M polyprotein) [Cleaved into: Glycoprotein G2 (Gn); Non-structural protein NSm; Glycoprotein G1 (Gc)]
ruditapes_c1632	virus-host interaction	other biological processes	P	Envelope glycoprotein (GP) (M polyprotein) [Cleaved into: Glycoprotein G2 (Gn); Non-structural protein NSm; Glycoprotein G1 (Gc)]
ruditapes_c30141	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_c9988	photorespiration	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
ruditapes_c9988	oxidation reduction	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
ruditapes_c9988	photosynthesis	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
ruditapes_c9988	reductive pentose-phosphate cycle	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
ruditapes_c9988	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
ruditapes_c20982	transport	transport	P	Probable proton ATPase 1B (EC 3.6.3.6) (LdH1B)
ruditapes_c20982	ATP catabolic process	other metabolic processes	P	Probable proton ATPase 1B (EC 3.6.3.6) (LdH1B)
ruditapes_c20982	ATP biosynthetic process	other metabolic processes	P	Probable proton ATPase 1B (EC 3.6.3.6) (LdH1B)
ruditapes_c20982	ion transport	transport	P	Probable proton ATPase 1B (EC 3.6.3.6) (LdH1B)
ruditapes_c20982	proton transport	transport	P	Probable proton ATPase 1B (EC 3.6.3.6) (LdH1B)
ruditapes_c20982	cation transport	transport	P	Probable proton ATPase 1B (EC 3.6.3.6) (LdH1B)
ruditapes_c20982	metabolic process	other metabolic processes	P	Probable proton ATPase 1B (EC 3.6.3.6) (LdH1B)
ruditapes_c582	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c582	metabolic process	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_c1168	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c582	mRNA processing	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c582	methylation	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_c1168	mRNA processing	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c582	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_c1168	methylation	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c582	mRNA capping	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_c1168	mRNA capping	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_c1168	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_c1168	metabolic process	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c19839	methylation	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c31696	metabolic process	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c19839	metabolic process	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c31696	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c19839	mRNA capping	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_lrc3362	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_lrc3362	methylation	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c19839	mRNA processing	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_lrc3362	mRNA processing	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c19839	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c31696	mRNA capping	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_lrc3362	mRNA capping	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c31696	mRNA processing	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c31696	methylation	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_lrc3362	metabolic process	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c19839	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_lrc3362	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c31696	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c28602	polysaccharide catabolic process	other metabolic processes	P	Beta-glucosidase (EC 3.2.1.21) (Amygdalase) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase)
ruditapes_c28602	cellulose catabolic process	other metabolic processes	P	Beta-glucosidase (EC 3.2.1.21) (Amygdalase) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase)
ruditapes_c28602	carbohydrate metabolic process	other metabolic processes	P	Beta-glucosidase (EC 3.2.1.21) (Amygdalase) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase)
ruditapes_c28602	metabolic process	other metabolic processes	P	Beta-glucosidase (EC 3.2.1.21) (Amygdalase) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase)
ruditapes_c9828	lipid biosynthetic process	other metabolic processes	P	"Malonyl-CoA decarboxylase, mitochondrial (MCD) (EC 4.1.1.9)"
ruditapes_c9828	acetyl-CoA biosynthetic process	other metabolic processes	P	"Malonyl-CoA decarboxylase, mitochondrial (MCD) (EC 4.1.1.9)"
ruditapes_c9828	fatty acid biosynthetic process	other metabolic processes	P	"Malonyl-CoA decarboxylase, mitochondrial (MCD) (EC 4.1.1.9)"
ruditapes_c23565	pathogenesis	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c23565	membrane fusion	cell organization and biogenesis	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c23565	"virion attachment, binding of host cell surface receptor"	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c23565	interspecies interaction between organisms	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c23565	viral envelope fusion with host membrane	cell organization and biogenesis	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes2_c3392	establishment of competence for transformation	other biological processes	P	DNA-entry nuclease (EC 3.-.-.-) (Competence-specific nuclease)
ruditapes2_c3320	establishment of competence for transformation	other biological processes	P	DNA-entry nuclease (EC 3.-.-.-) (Competence-specific nuclease)
ruditapes2_c5202	establishment of competence for transformation	other biological processes	P	DNA-entry nuclease (EC 3.-.-.-) (Competence-specific nuclease)
ruditapes2_c4208	establishment of competence for transformation	other biological processes	P	DNA-entry nuclease (EC 3.-.-.-) (Competence-specific nuclease)
ruditapes_c16907	DNA replication	DNA metabolism	P	DNA repair protein REV1 (EC 2.7.7.-) (Reversionless protein 1)
ruditapes_c16907	DNA repair	stress response	P	DNA repair protein REV1 (EC 2.7.7.-) (Reversionless protein 1)
ruditapes_c16907	DNA repair	DNA metabolism	P	DNA repair protein REV1 (EC 2.7.7.-) (Reversionless protein 1)
ruditapes_c16907	error-prone postreplication DNA repair	stress response	P	DNA repair protein REV1 (EC 2.7.7.-) (Reversionless protein 1)
ruditapes_c16907	error-prone postreplication DNA repair	DNA metabolism	P	DNA repair protein REV1 (EC 2.7.7.-) (Reversionless protein 1)
ruditapes_c16907	response to DNA damage stimulus	stress response	P	DNA repair protein REV1 (EC 2.7.7.-) (Reversionless protein 1)
ruditapes2_c3946	electron transport chain	other metabolic processes	P	Rubredoxin-1 (Rdxs)
ruditapes2_c3946	transport	transport	P	Rubredoxin-1 (Rdxs)
ruditapes_c12896	proton transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c12896	ion transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c12896	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c12896	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c12896	transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c12896	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c1980	apoptosis	death	P	Programmed cell death protein 6 (ALG-257) (PMP41) (Probable calcium-binding protein ALG-2)
ruditapes_c1980	activation of caspase activity	death	P	Programmed cell death protein 6 (ALG-257) (PMP41) (Probable calcium-binding protein ALG-2)
ruditapes_c1980	response to calcium ion	other biological processes	P	Programmed cell death protein 6 (ALG-257) (PMP41) (Probable calcium-binding protein ALG-2)
ruditapes_c23627	immune response	other biological processes	P	Growth-regulated alpha protein (C-X-C motif chemokine 1) (Platelet-derived growth factor-inducible protein KC) (Secretory protein N51) [Cleaved into: KC(5-72) (Hematopoietic synergistic factor) (HSF) (KC-T)]
ruditapes_c23627	inflammatory response	stress response	P	Growth-regulated alpha protein (C-X-C motif chemokine 1) (Platelet-derived growth factor-inducible protein KC) (Secretory protein N51) [Cleaved into: KC(5-72) (Hematopoietic synergistic factor) (HSF) (KC-T)]
ruditapes_c23627	neutrophil chemotaxis	other biological processes	P	Growth-regulated alpha protein (C-X-C motif chemokine 1) (Platelet-derived growth factor-inducible protein KC) (Secretory protein N51) [Cleaved into: KC(5-72) (Hematopoietic synergistic factor) (HSF) (KC-T)]
ruditapes_c17754	protein transport	transport	P	Vacuolar membrane protein PEP5 (Carboxypeptidase Y-deficient protein 5) (Vacuolar biogenesis protein END1) (Vacuolar morphogenesis protein 1) (Vacuolar protein sorting-associated protein 11) (Vacuolar protein-targeting protein 11)
ruditapes_c17754	transport	transport	P	Vacuolar membrane protein PEP5 (Carboxypeptidase Y-deficient protein 5) (Vacuolar biogenesis protein END1) (Vacuolar morphogenesis protein 1) (Vacuolar protein sorting-associated protein 11) (Vacuolar protein-targeting protein 11)
ruditapes_c17754	"vacuole fusion, non-autophagic"	cell organization and biogenesis	P	Vacuolar membrane protein PEP5 (Carboxypeptidase Y-deficient protein 5) (Vacuolar biogenesis protein END1) (Vacuolar morphogenesis protein 1) (Vacuolar protein sorting-associated protein 11) (Vacuolar protein-targeting protein 11)
ruditapes_c17754	"regulation of vacuole fusion, non-autophagic"	cell organization and biogenesis	P	Vacuolar membrane protein PEP5 (Carboxypeptidase Y-deficient protein 5) (Vacuolar biogenesis protein END1) (Vacuolar morphogenesis protein 1) (Vacuolar protein sorting-associated protein 11) (Vacuolar protein-targeting protein 11)
ruditapes_c17754	vesicle docking during exocytosis	transport	P	Vacuolar membrane protein PEP5 (Carboxypeptidase Y-deficient protein 5) (Vacuolar biogenesis protein END1) (Vacuolar morphogenesis protein 1) (Vacuolar protein sorting-associated protein 11) (Vacuolar protein-targeting protein 11)
ruditapes_c17754	Golgi to endosome transport	transport	P	Vacuolar membrane protein PEP5 (Carboxypeptidase Y-deficient protein 5) (Vacuolar biogenesis protein END1) (Vacuolar morphogenesis protein 1) (Vacuolar protein sorting-associated protein 11) (Vacuolar protein-targeting protein 11)
ruditapes_c17754	late endosome to vacuole transport	transport	P	Vacuolar membrane protein PEP5 (Carboxypeptidase Y-deficient protein 5) (Vacuolar biogenesis protein END1) (Vacuolar morphogenesis protein 1) (Vacuolar protein sorting-associated protein 11) (Vacuolar protein-targeting protein 11)
ruditapes_c7711	peptide metabolic process	other metabolic processes	P	Peptidyl-glycine alpha-amidating monooxygenase B (PAM-B) (Peptide C-terminal alpha-amidating enzyme II) (AE-II) (Peptidyl-glycine alpha-amidating monooxygenase II) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase B (PHM-B) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase B (EC 4.3.2.5) (Peptidylamidoglycolate lyase-B) (PAL-B)]
ruditapes_c7711	metabolic process	other metabolic processes	P	Peptidyl-glycine alpha-amidating monooxygenase B (PAM-B) (Peptide C-terminal alpha-amidating enzyme II) (AE-II) (Peptidyl-glycine alpha-amidating monooxygenase II) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase B (PHM-B) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase B (EC 4.3.2.5) (Peptidylamidoglycolate lyase-B) (PAL-B)]
ruditapes_c7711	oxidation reduction	other metabolic processes	P	Peptidyl-glycine alpha-amidating monooxygenase B (PAM-B) (Peptide C-terminal alpha-amidating enzyme II) (AE-II) (Peptidyl-glycine alpha-amidating monooxygenase II) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase B (PHM-B) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase B (EC 4.3.2.5) (Peptidylamidoglycolate lyase-B) (PAL-B)]
ruditapes_c28927	interspecies interaction between organisms	other biological processes	P	Large T antigen (LT) (LT-AG) (EC 3.6.4.-)
ruditapes_c28927	evasion by virus of host immune response	stress response	P	Large T antigen (LT) (LT-AG) (EC 3.6.4.-)
ruditapes_c28927	DNA replication	DNA metabolism	P	Large T antigen (LT) (LT-AG) (EC 3.6.4.-)
ruditapes_lrc39087	interspecies interaction between organisms	other biological processes	P	Middle T antigen (MT) (MT-AG)
ruditapes2_c166	cell adhesion	cell adhesion	P	Contactin-1 (Neural cell surface protein F3)
ruditapes2_c166	Notch signaling pathway	signal transduction	P	Contactin-1 (Neural cell surface protein F3)
ruditapes2_c166	positive regulation of gene expression	other metabolic processes	P	Contactin-1 (Neural cell surface protein F3)
ruditapes_c7170	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor AP-1 (Proto-oncogene c-Jun)
ruditapes_c7170	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor AP-1 (Proto-oncogene c-Jun)
ruditapes2_c1251	telomere maintenance via telomerase	DNA metabolism	P	DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)
ruditapes2_c1251	telomere maintenance via telomerase	cell organization and biogenesis	P	DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)
ruditapes2_c1251	regulation of DNA recombination	DNA metabolism	P	DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)
ruditapes2_c1251	mitotic sister chromatid cohesion	cell cycle and proliferation	P	DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)
ruditapes2_c1251	mitotic sister chromatid cohesion	cell organization and biogenesis	P	DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)
ruditapes2_c1251	DNA topological change	DNA metabolism	P	DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)
ruditapes2_c1251	reciprocal meiotic recombination	cell cycle and proliferation	P	DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)
ruditapes2_c1251	reciprocal meiotic recombination	DNA metabolism	P	DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)
ruditapes_c14745	response to drug	other biological processes	P	Cytochrome P450 2B3 (EC 1.14.14.1) (CYPIIB3)
ruditapes_c14745	oxidation reduction	other metabolic processes	P	Cytochrome P450 2B3 (EC 1.14.14.1) (CYPIIB3)
ruditapes_c14745	response to organic cyclic substance	other biological processes	P	Cytochrome P450 2B3 (EC 1.14.14.1) (CYPIIB3)
ruditapes_c27856	type I interferon-mediated signaling pathway	signal transduction	P	Interferon-induced transmembrane protein 1 (Dispanin subfamily A member 2a) (DSPA2a) (Interferon-induced protein 17) (Interferon-inducible protein 9-27) (Leu-13 antigen) (CD antigen CD225)
ruditapes_c27856	negative regulation of cell proliferation	cell cycle and proliferation	P	Interferon-induced transmembrane protein 1 (Dispanin subfamily A member 2a) (DSPA2a) (Interferon-induced protein 17) (Interferon-inducible protein 9-27) (Leu-13 antigen) (CD antigen CD225)
ruditapes_c27856	response to virus	other biological processes	P	Interferon-induced transmembrane protein 1 (Dispanin subfamily A member 2a) (DSPA2a) (Interferon-induced protein 17) (Interferon-inducible protein 9-27) (Leu-13 antigen) (CD antigen CD225)
ruditapes_c27856	regulation of immune response	other biological processes	P	Interferon-induced transmembrane protein 1 (Dispanin subfamily A member 2a) (DSPA2a) (Interferon-induced protein 17) (Interferon-inducible protein 9-27) (Leu-13 antigen) (CD antigen CD225)
ruditapes_c27856	cell surface receptor linked signal transduction	signal transduction	P	Interferon-induced transmembrane protein 1 (Dispanin subfamily A member 2a) (DSPA2a) (Interferon-induced protein 17) (Interferon-inducible protein 9-27) (Leu-13 antigen) (CD antigen CD225)
ruditapes_c27856	cytokine-mediated signaling pathway	signal transduction	P	Interferon-induced transmembrane protein 1 (Dispanin subfamily A member 2a) (DSPA2a) (Interferon-induced protein 17) (Interferon-inducible protein 9-27) (Leu-13 antigen) (CD antigen CD225)
ruditapes_c27856	response to biotic stimulus	other biological processes	P	Interferon-induced transmembrane protein 1 (Dispanin subfamily A member 2a) (DSPA2a) (Interferon-induced protein 17) (Interferon-inducible protein 9-27) (Leu-13 antigen) (CD antigen CD225)
ruditapes_c27856	innate immune response	stress response	P	Interferon-induced transmembrane protein 1 (Dispanin subfamily A member 2a) (DSPA2a) (Interferon-induced protein 17) (Interferon-inducible protein 9-27) (Leu-13 antigen) (CD antigen CD225)
ruditapes_c28286	glutamate catabolic process to 2-oxoglutarate	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	glycerol biosynthetic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	glutamate catabolic process to aspartate	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	oxaloacetate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	response to glucocorticoid stimulus	other biological processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	biosynthetic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	cellular amino acid metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	cellular response to insulin stimulus	other biological processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	2-oxoglutarate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	aspartate biosynthetic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	glutamate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	fatty acid homeostasis	other biological processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	aspartate catabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	aspartate metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c28286	dicarboxylic acid metabolic process	other metabolic processes	P	"Aspartate aminotransferase, cytoplasmic (cAspAT) (EC 2.6.1.1) (EC 2.6.1.3) (Cysteine aminotransferase, cytoplasmic) (Cysteine transaminase, cytoplasmic) (cCAT) (Glutamate oxaloacetate transaminase 1) (Transaminase A)"
ruditapes_c12510	metabolic process	other metabolic processes	P	Tryptophan synthase (EC 4.2.1.20)
ruditapes_c12510	aromatic amino acid family biosynthetic process	other metabolic processes	P	Tryptophan synthase (EC 4.2.1.20)
ruditapes_c12510	tryptophan metabolic process	other metabolic processes	P	Tryptophan synthase (EC 4.2.1.20)
ruditapes_c12510	tryptophan biosynthetic process	other metabolic processes	P	Tryptophan synthase (EC 4.2.1.20)
ruditapes_c12510	cellular amino acid biosynthetic process	other metabolic processes	P	Tryptophan synthase (EC 4.2.1.20)
ruditapes_c8160	axonogenesis	developmental processes	P	"2',3'-cyclic-nucleotide 3'-phosphodiesterase (CNP) (CNPase) (EC 3.1.4.37)"
ruditapes_c8160	axonogenesis	cell organization and biogenesis	P	"2',3'-cyclic-nucleotide 3'-phosphodiesterase (CNP) (CNPase) (EC 3.1.4.37)"
ruditapes_c8160	response to toxin	other biological processes	P	"2',3'-cyclic-nucleotide 3'-phosphodiesterase (CNP) (CNPase) (EC 3.1.4.37)"
ruditapes_c8160	microtubule cytoskeleton organization	cell organization and biogenesis	P	"2',3'-cyclic-nucleotide 3'-phosphodiesterase (CNP) (CNPase) (EC 3.1.4.37)"
ruditapes_c8160	cyclic nucleotide catabolic process	other metabolic processes	P	"2',3'-cyclic-nucleotide 3'-phosphodiesterase (CNP) (CNPase) (EC 3.1.4.37)"
ruditapes_c8160	metabolic process	other metabolic processes	P	"2',3'-cyclic-nucleotide 3'-phosphodiesterase (CNP) (CNPase) (EC 3.1.4.37)"
ruditapes_c8160	adult locomotory behavior	other biological processes	P	"2',3'-cyclic-nucleotide 3'-phosphodiesterase (CNP) (CNPase) (EC 3.1.4.37)"
ruditapes_c8160	RNA metabolic process	RNA metabolism	P	"2',3'-cyclic-nucleotide 3'-phosphodiesterase (CNP) (CNPase) (EC 3.1.4.37)"
ruditapes_lrc35964	proteolysis	protein metabolism	P	Digestive cysteine proteinase 1 (EC 3.4.22.-)
ruditapes_s34094	proteolysis	protein metabolism	P	Digestive cysteine proteinase 1 (EC 3.4.22.-)
ruditapes_c11992	blood coagulation	stress response	P	Lysosome-associated membrane glycoprotein 2 (LAMP-2) (Lysosome-associated membrane protein 2) (CD107 antigen-like family member B) (CD antigen CD107b)
ruditapes_c26059	platelet activation	stress response	P	Lysosome-associated membrane glycoprotein 2 (LAMP-2) (Lysosome-associated membrane protein 2) (CD107 antigen-like family member B) (CD antigen CD107b)
ruditapes_c26059	platelet degranulation	transport	P	Lysosome-associated membrane glycoprotein 2 (LAMP-2) (Lysosome-associated membrane protein 2) (CD107 antigen-like family member B) (CD antigen CD107b)
ruditapes_c11992	platelet degranulation	transport	P	Lysosome-associated membrane glycoprotein 2 (LAMP-2) (Lysosome-associated membrane protein 2) (CD107 antigen-like family member B) (CD antigen CD107b)
ruditapes_c26059	blood coagulation	stress response	P	Lysosome-associated membrane glycoprotein 2 (LAMP-2) (Lysosome-associated membrane protein 2) (CD107 antigen-like family member B) (CD antigen CD107b)
ruditapes_c11992	platelet activation	stress response	P	Lysosome-associated membrane glycoprotein 2 (LAMP-2) (Lysosome-associated membrane protein 2) (CD107 antigen-like family member B) (CD antigen CD107b)
ruditapes_c5999	maintenance of dauer	developmental processes	P	Protein glp-1
ruditapes_c5999	embryonic pattern specification	developmental processes	P	Protein glp-1
ruditapes2_c3057	maintenance of dauer	developmental processes	P	Protein glp-1
ruditapes2_c3057	regulation of meiosis	cell cycle and proliferation	P	Protein glp-1
ruditapes2_c3057	embryonic development ending in birth or egg hatching	developmental processes	P	Protein glp-1
ruditapes2_c3057	Notch signaling pathway	signal transduction	P	Protein glp-1
ruditapes2_c3057	positive regulation of growth rate	other biological processes	P	Protein glp-1
ruditapes_c5999	reproduction	other biological processes	P	Protein glp-1
ruditapes2_c3057	determination of adult life span	developmental processes	P	Protein glp-1
ruditapes2_c3057	regulation of cell proliferation	cell cycle and proliferation	P	Protein glp-1
ruditapes2_c3057	cell fate specification	other biological processes	P	Protein glp-1
ruditapes_c5999	determination of adult life span	developmental processes	P	Protein glp-1
ruditapes_c5999	multicellular organismal development	developmental processes	P	Protein glp-1
ruditapes2_c3057	reproduction	other biological processes	P	Protein glp-1
ruditapes_c5999	positive regulation of growth rate	other biological processes	P	Protein glp-1
ruditapes_c5999	regulation of meiosis	cell cycle and proliferation	P	Protein glp-1
ruditapes2_c3057	multicellular organismal development	developmental processes	P	Protein glp-1
ruditapes2_c3057	cell differentiation	other biological processes	P	Protein glp-1
ruditapes_c5999	cell differentiation	other biological processes	P	Protein glp-1
ruditapes2_c3057	embryonic pattern specification	developmental processes	P	Protein glp-1
ruditapes_c5999	embryonic development ending in birth or egg hatching	developmental processes	P	Protein glp-1
ruditapes_c5999	Notch signaling pathway	signal transduction	P	Protein glp-1
ruditapes_c5999	regulation of cell proliferation	cell cycle and proliferation	P	Protein glp-1
ruditapes2_c3057	pharyngeal muscle development	developmental processes	P	Protein glp-1
ruditapes_c5999	nematode larval development	developmental processes	P	Protein glp-1
ruditapes2_c3057	nematode larval development	developmental processes	P	Protein glp-1
ruditapes_c5999	body morphogenesis	other biological processes	P	Protein glp-1
ruditapes_c5999	pharyngeal muscle development	developmental processes	P	Protein glp-1
ruditapes2_c3057	body morphogenesis	other biological processes	P	Protein glp-1
ruditapes_c5999	cell fate specification	other biological processes	P	Protein glp-1
ruditapes_c23724	DNA repair	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23724	DNA repair	DNA metabolism	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23724	response to DNA damage stimulus	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23724	ATP catabolic process	other metabolic processes	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23724	SOS response	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23724	nucleotide-excision repair	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c23724	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c24242	invasive growth in response to glucose limitation	other biological processes	P	Protein STE12
ruditapes_c24242	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein STE12
ruditapes_c24242	positive regulation of transcription from RNA polymerase II promoter by pheromones	RNA metabolism	P	Protein STE12
ruditapes_c24242	"transcription, DNA-dependent"	RNA metabolism	P	Protein STE12
ruditapes_c24242	conjugation with cellular fusion	other biological processes	P	Protein STE12
ruditapes_c24242	pseudohyphal growth	other biological processes	P	Protein STE12
ruditapes_c24242	response to pheromone	other biological processes	P	Protein STE12
ruditapes_c24242	negative regulation of transcription from RNA polymerase II promoter by pheromones	RNA metabolism	P	Protein STE12
ruditapes_c10602	transport	transport	P	Sodium transport ATPase 1 (EC 3.6.3.7)
ruditapes_c10602	hyperosmotic response	stress response	P	Sodium transport ATPase 1 (EC 3.6.3.7)
ruditapes_c10602	cellular response to glucose starvation	stress response	P	Sodium transport ATPase 1 (EC 3.6.3.7)
ruditapes_c10602	potassium ion transport	transport	P	Sodium transport ATPase 1 (EC 3.6.3.7)
ruditapes_c10602	response to salt stress	stress response	P	Sodium transport ATPase 1 (EC 3.6.3.7)
ruditapes_c10602	cation transport	transport	P	Sodium transport ATPase 1 (EC 3.6.3.7)
ruditapes_c10602	ATP biosynthetic process	other metabolic processes	P	Sodium transport ATPase 1 (EC 3.6.3.7)
ruditapes_c10602	ion transport	transport	P	Sodium transport ATPase 1 (EC 3.6.3.7)
ruditapes_c10602	transmembrane transport	transport	P	Sodium transport ATPase 1 (EC 3.6.3.7)
ruditapes_c10602	metabolic process	other metabolic processes	P	Sodium transport ATPase 1 (EC 3.6.3.7)
ruditapes_c10602	sodium ion transport	transport	P	Sodium transport ATPase 1 (EC 3.6.3.7)
ruditapes_c5289	GTP catabolic process	other metabolic processes	P	Tubulin beta-2 chain (Beta-2-tubulin)
ruditapes_c5289	microtubule-based movement	other biological processes	P	Tubulin beta-2 chain (Beta-2-tubulin)
ruditapes_c5289	microtubule-based process	other biological processes	P	Tubulin beta-2 chain (Beta-2-tubulin)
ruditapes_c5289	protein polymerization	cell organization and biogenesis	P	Tubulin beta-2 chain (Beta-2-tubulin)
ruditapes_c4333	cell adhesion	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes2_c2566	cell adhesion	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes2_lrc6154	cell adhesion	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes2_c5154	cell adhesion	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_lrc33128	cell adhesion	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c28811	cell adhesion	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c6998	heart development	developmental processes	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c6998	response to wounding	stress response	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c3312	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c3312	glial cell migration	developmental processes	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c3312	axon regeneration	stress response	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c6998	cell recognition	other biological processes	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c3312	heart development	developmental processes	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c6998	multicellular organismal development	developmental processes	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c3312	response to wounding	stress response	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c3312	cell recognition	other biological processes	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c3312	multicellular organismal development	developmental processes	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c6998	axon regeneration	stress response	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c6998	axon regeneration	developmental processes	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c6998	axon regeneration	cell organization and biogenesis	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c6998	glial cell migration	developmental processes	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c6998	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c3312	axon regeneration	developmental processes	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c3312	axon regeneration	cell organization and biogenesis	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_lrc34855	ion transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes2_lrc3482	proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes2_lrc3482	ion transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc35901	transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc35901	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc35901	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc34855	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc34855	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc34855	transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes2_lrc3482	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes2_lrc3482	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc34855	proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc35901	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes2_lrc3482	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes2_lrc3482	transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc35901	proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc35901	ion transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc34855	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_c20505	proteolysis	protein metabolism	P	Acylamino-acid-releasing enzyme (AARE) (EC 3.4.19.1) (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
ruditapes2_c1914	multicellular organismal development	developmental processes	P	Homeotic protein female sterile (Fragile-chorion membrane protein)
ruditapes2_c1914	terminal region determination	developmental processes	P	Homeotic protein female sterile (Fragile-chorion membrane protein)
ruditapes2_c1914	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeotic protein female sterile (Fragile-chorion membrane protein)
ruditapes_c23513	plasmid partitioning	other biological processes	P	Trans-acting factor C (REP2)
ruditapes2_lrc3396	electron transport chain	other metabolic processes	P	"Electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes2_lrc3396	oxidation reduction	other metabolic processes	P	"Electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes_c19627	oxidation reduction	other metabolic processes	P	"Electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes_c19627	electron transport chain	other metabolic processes	P	"Electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes2_lrc3396	respiratory electron transport chain	other metabolic processes	P	"Electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes_c19627	transport	transport	P	"Electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes2_lrc3396	transport	transport	P	"Electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes_c19627	respiratory electron transport chain	other metabolic processes	P	"Electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes_c11818	"photosynthesis, light harvesting"	other metabolic processes	P	"Chlorophyll a-b binding protein 1, chloroplastic (LHCII type I CAB-1) (LHCP)"
ruditapes_c11818	protein-chromophore linkage	protein metabolism	P	"Chlorophyll a-b binding protein 1, chloroplastic (LHCII type I CAB-1) (LHCP)"
ruditapes_c11818	photosynthesis	other metabolic processes	P	"Chlorophyll a-b binding protein 1, chloroplastic (LHCII type I CAB-1) (LHCP)"
ruditapes_s34767	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s34767	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s34767	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s34767	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s34767	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s34767	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s34767	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s34767	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s34767	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_s39342	skeletal system development	developmental processes	P	Collagen alpha-1(III) chain
ruditapes_s39342	collagen biosynthetic process	other metabolic processes	P	Collagen alpha-1(III) chain
ruditapes_s39342	response to cytokine stimulus	other biological processes	P	Collagen alpha-1(III) chain
ruditapes_s39342	blood vessel development	developmental processes	P	Collagen alpha-1(III) chain
ruditapes_s39342	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(III) chain
ruditapes_s39342	heart development	developmental processes	P	Collagen alpha-1(III) chain
ruditapes_s39342	wound healing	stress response	P	Collagen alpha-1(III) chain
ruditapes_s39342	skin development	developmental processes	P	Collagen alpha-1(III) chain
ruditapes_s39342	peptide cross-linking	protein metabolism	P	Collagen alpha-1(III) chain
ruditapes_s39342	response to radiation	other biological processes	P	Collagen alpha-1(III) chain
ruditapes_s39342	transforming growth factor beta receptor signaling pathway	signal transduction	P	Collagen alpha-1(III) chain
ruditapes_s39342	fibril organization	cell organization and biogenesis	P	Collagen alpha-1(III) chain
ruditapes_s39342	gut development	developmental processes	P	Collagen alpha-1(III) chain
ruditapes_s39342	cell-matrix adhesion	cell adhesion	P	Collagen alpha-1(III) chain
ruditapes_s39342	negative regulation of immune response	other biological processes	P	Collagen alpha-1(III) chain
ruditapes_s39342	integrin-mediated signaling pathway	signal transduction	P	Collagen alpha-1(III) chain
ruditapes_c18503	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain (Fibrochimerin)
ruditapes2_lrc3424	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain (Fibrochimerin)
ruditapes_c7670	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain (Fibrochimerin)
ruditapes2_lrc5055	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain (Fibrochimerin)
ruditapes2_lrc6086	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain (Fibrochimerin)
ruditapes_lrc33987	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain (Fibrochimerin)
ruditapes2_c3893	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain (Fibrochimerin)
ruditapes_c9900	translation	protein metabolism	P	50S ribosomal protein L18P
ruditapes_c24769	translation	protein metabolism	P	30S ribosomal protein S12
ruditapes_c29219	ventral midline development	developmental processes	P	Protein TKR (Tyrosine kinase-related) (dTKR)
ruditapes_c30933	inner ear development	developmental processes	P	Complement C1q subcomponent subunit B
ruditapes_c30933	"complement activation, classical pathway"	stress response	P	Complement C1q subcomponent subunit B
ruditapes_c30933	"complement activation, classical pathway"	protein metabolism	P	Complement C1q subcomponent subunit B
ruditapes_c30933	innate immune response	stress response	P	Complement C1q subcomponent subunit B
ruditapes2_lrc4348	translation	protein metabolism	P	60S ribosomal protein L4 (L1) (Fragment)
ruditapes2_lrc6194	translation	protein metabolism	P	40S ribosomal protein S14
ruditapes2_lrc6194	biological_process	other biological processes	P	40S ribosomal protein S14
ruditapes2_lrc4116	biological_process	other biological processes	P	40S ribosomal protein S14
ruditapes2_lrc4116	translation	protein metabolism	P	40S ribosomal protein S14
ruditapes_c27873	oxidation reduction	other metabolic processes	P	L-ascorbate oxidase (ASO) (Ascorbase) (EC 1.10.3.3)
ruditapes2_c2038	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase 1B (EC 1.1.1.1) (Alcohol dehydrogenase subunit beta)
ruditapes_lrc24257	"regulation of transcription, DNA-dependent"	RNA metabolism	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	chromatin remodeling	cell organization and biogenesis	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	"transcription, DNA-dependent"	RNA metabolism	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	DNA repair	stress response	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	"nucleotide-excision repair, DNA damage recognition"	DNA metabolism	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	"nucleotide-excision repair, DNA damage recognition"	cell organization and biogenesis	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	DNA repair	DNA metabolism	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	response to DNA damage stimulus	stress response	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	chromatin silencing at silent mating-type cassette	RNA metabolism	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	DNA replication	DNA metabolism	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_lrc24257	"nucleotide-excision repair, DNA damage recognition"	stress response	P	ARS-binding factor 1 (Bidirectionally acting factor 1) (DNA replication enhancer-binding protein OBF1) (SFB-B)
ruditapes_c19830	cytokinesis	other biological processes	P	Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 2)
ruditapes_c19830	contractile ring contraction involved in cytokinesis	cell cycle and proliferation	P	Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 2)
ruditapes_c19830	chitin biosynthetic process	other metabolic processes	P	Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 2)
ruditapes_c19830	cell wall organization	cell organization and biogenesis	P	Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 2)
ruditapes_c5272	evasion by virus of host immune response	stress response	P	Nucleoprotein (Nucleocapsid protein) (Protein N)
ruditapes_c30951	transcription from RNA polymerase II promoter	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit)
ruditapes_c30951	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit)
ruditapes_c1800	transcription from RNA polymerase II promoter	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit)
ruditapes_c4100	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit)
ruditapes_c4100	transcription from RNA polymerase II promoter	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit)
ruditapes_c1800	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (EC 2.7.7.6) (DNA-directed RNA polymerase III largest subunit)
ruditapes_c8779	biological_process	other biological processes	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c2895	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c8779	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c8779	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c2895	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c8779	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c2895	biological_process	other biological processes	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c2895	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c8779	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c2895	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc31706	oxygen transport	transport	P	Arylphorin subunit beta
ruditapes_lrc31706	transport	transport	P	Arylphorin subunit beta
ruditapes_lrc33447	cell adhesion	cell adhesion	P	Muscle-specific protein 20
ruditapes_lrc33447	regulation of cell shape	cell organization and biogenesis	P	Muscle-specific protein 20
ruditapes_lrc33447	myoblast fusion	developmental processes	P	Muscle-specific protein 20
ruditapes_lrc33447	myoblast fusion	cell organization and biogenesis	P	Muscle-specific protein 20
ruditapes_c23575	RNA-dependent DNA replication	DNA metabolism	P	Transposon TX1 uncharacterized 149 kDa protein (ORF 2)
ruditapes_c16615	RNA-dependent DNA replication	DNA metabolism	P	Transposon TX1 uncharacterized 149 kDa protein (ORF 2)
ruditapes_c12641	RNA-dependent DNA replication	DNA metabolism	P	Transposon TX1 uncharacterized 149 kDa protein (ORF 2)
ruditapes_lrc36635	response to calcium ion	other biological processes	P	Fibrinogen alpha chain [Cleaved into: Fibrinopeptide A; Fibrinogen alpha chain]
ruditapes_lrc36635	platelet activation	stress response	P	Fibrinogen alpha chain [Cleaved into: Fibrinopeptide A; Fibrinogen alpha chain]
ruditapes_lrc36635	protein polymerization	cell organization and biogenesis	P	Fibrinogen alpha chain [Cleaved into: Fibrinopeptide A; Fibrinogen alpha chain]
ruditapes_lrc36635	blood coagulation	stress response	P	Fibrinogen alpha chain [Cleaved into: Fibrinopeptide A; Fibrinogen alpha chain]
ruditapes_lrc36635	signal transduction	signal transduction	P	Fibrinogen alpha chain [Cleaved into: Fibrinopeptide A; Fibrinogen alpha chain]
ruditapes2_c1220	phospholipid metabolic process	other metabolic processes	P	Basic phospholipase A2 nigexine (svPLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes2_c1220	lipid catabolic process	other metabolic processes	P	Basic phospholipase A2 nigexine (svPLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_c15380	autophagic cell death	death	P	Lysosome-associated membrane glycoprotein 1 (LAMP-1) (Lysosome-associated membrane protein 1) (120 kDa lysosomal membrane glycoprotein) (LGP-120) (CD107 antigen-like family member A) (CD antigen CD107a)
ruditapes_c15380	autophagy	other metabolic processes	P	Lysosome-associated membrane glycoprotein 1 (LAMP-1) (Lysosome-associated membrane protein 1) (120 kDa lysosomal membrane glycoprotein) (LGP-120) (CD107 antigen-like family member A) (CD antigen CD107a)
ruditapes_c8799	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
ruditapes_c8799	urea cycle	other metabolic processes	P	Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
ruditapes_c8799	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
ruditapes2_c2019	oxidation reduction	other metabolic processes	P	Cytochrome P450 4A6 (CYPIVA6) (Cytochrome P450-KA-1) (Lauric acid omega-hydroxylase) (EC 1.14.15.3)
ruditapes_c21416	locomotion	other biological processes	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	cell-cell signaling involved in cell fate specification	cell-cell signaling	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	nematode larval development	developmental processes	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	receptor-mediated endocytosis	transport	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	receptor-mediated endocytosis	cell organization and biogenesis	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	oviposition	other biological processes	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	reproduction	other biological processes	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	Notch signaling pathway	signal transduction	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	embryonic development ending in birth or egg hatching	developmental processes	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	vulval development	developmental processes	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	dauer exit	developmental processes	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	cell differentiation	other biological processes	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	cell fate specification	other biological processes	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	multicellular organismal development	developmental processes	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c21416	hermaphrodite genitalia development	developmental processes	P	Protein lin-12 (Abnormal cell lineage protein 12)
ruditapes_c13636	lipid metabolic process	other metabolic processes	P	"Enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17) (Enoyl-CoA hydratase 1) (Short-chain enoyl-CoA hydratase) (SCEH)"
ruditapes_c13636	fatty acid beta-oxidation	other metabolic processes	P	"Enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17) (Enoyl-CoA hydratase 1) (Short-chain enoyl-CoA hydratase) (SCEH)"
ruditapes_c13636	fatty acid metabolic process	other metabolic processes	P	"Enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17) (Enoyl-CoA hydratase 1) (Short-chain enoyl-CoA hydratase) (SCEH)"
ruditapes_c13636	metabolic process	other metabolic processes	P	"Enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17) (Enoyl-CoA hydratase 1) (Short-chain enoyl-CoA hydratase) (SCEH)"
ruditapes_c9595	protein amino acid autophosphorylation	protein metabolism	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c8789	phosphorylation	other metabolic processes	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c9595	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c9595	actin cytoskeleton reorganization	cell organization and biogenesis	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c9595	phosphorylation	other metabolic processes	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c8789	protein amino acid autophosphorylation	protein metabolism	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c8789	actin cytoskeleton reorganization	cell organization and biogenesis	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c8789	protein amino acid phosphorylation	protein metabolism	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c9595	male sex determination	developmental processes	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c8789	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c9595	protein amino acid phosphorylation	protein metabolism	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c8789	male sex determination	developmental processes	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor) [Cleaved into: Insulin receptor-related protein alpha chain; Insulin receptor-related protein beta chain]
ruditapes_c24876	fever	stress response	P	Interleukin-1 beta (IL-1 beta) (Lymphocyte proliferation-potentiating factor)
ruditapes_c24876	inflammatory response	stress response	P	Interleukin-1 beta (IL-1 beta) (Lymphocyte proliferation-potentiating factor)
ruditapes_c24876	immune response	other biological processes	P	Interleukin-1 beta (IL-1 beta) (Lymphocyte proliferation-potentiating factor)
ruditapes_c24876	positive regulation of cell division	other biological processes	P	Interleukin-1 beta (IL-1 beta) (Lymphocyte proliferation-potentiating factor)
ruditapes_c10408	cAMP catabolic process	other metabolic processes	P	"cAMP-specific 3',5'-cyclic phosphodiesterase 4B (EC 3.1.4.17) (DPDE4)"
ruditapes_c10408	signal transduction	signal transduction	P	"cAMP-specific 3',5'-cyclic phosphodiesterase 4B (EC 3.1.4.17) (DPDE4)"
ruditapes_c10408	metabolic process	other metabolic processes	P	"cAMP-specific 3',5'-cyclic phosphodiesterase 4B (EC 3.1.4.17) (DPDE4)"
ruditapes_c24102	oxidation reduction	other metabolic processes	P	Thyroid peroxidase (TPO) (EC 1.11.1.8)
ruditapes_c24102	hydrogen peroxide catabolic process	stress response	P	Thyroid peroxidase (TPO) (EC 1.11.1.8)
ruditapes_c24102	hydrogen peroxide catabolic process	other metabolic processes	P	Thyroid peroxidase (TPO) (EC 1.11.1.8)
ruditapes_c24102	thyroid hormone generation	other metabolic processes	P	Thyroid peroxidase (TPO) (EC 1.11.1.8)
ruditapes_c24102	hormone biosynthetic process	other metabolic processes	P	Thyroid peroxidase (TPO) (EC 1.11.1.8)
ruditapes_c24102	response to oxidative stress	stress response	P	Thyroid peroxidase (TPO) (EC 1.11.1.8)
ruditapes_c2422	biological_process	other biological processes	P	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1) (Fragment)
ruditapes_c2422	negative regulation of peptidase activity	other biological processes	P	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1) (Fragment)
ruditapes_c24496	negative regulation of peptidase activity	other biological processes	P	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1) (Fragment)
ruditapes_c24496	biological_process	other biological processes	P	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1) (Fragment)
ruditapes_c4973	biological_process	other biological processes	P	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1) (Fragment)
ruditapes2_c307	negative regulation of peptidase activity	other biological processes	P	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1) (Fragment)
ruditapes2_c307	biological_process	other biological processes	P	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1) (Fragment)
ruditapes_c4973	negative regulation of peptidase activity	other biological processes	P	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1) (Fragment)
ruditapes_c22232	oxidation reduction	other metabolic processes	P	Lambda-crystallin (EC 1.1.1.45) (L-gulonate 3-dehydrogenase) (Gul3DH)
ruditapes_c10043	fatty acid metabolic process	other metabolic processes	P	Lambda-crystallin (EC 1.1.1.45) (L-gulonate 3-dehydrogenase) (Gul3DH)
ruditapes_c10043	oxidation reduction	other metabolic processes	P	Lambda-crystallin (EC 1.1.1.45) (L-gulonate 3-dehydrogenase) (Gul3DH)
ruditapes_c22232	fatty acid metabolic process	other metabolic processes	P	Lambda-crystallin (EC 1.1.1.45) (L-gulonate 3-dehydrogenase) (Gul3DH)
ruditapes_c23509	cadmium ion transport	transport	P	Bile pigment transporter 1
ruditapes_c23509	bilirubin transport	transport	P	Bile pigment transporter 1
ruditapes_c23509	transmembrane cadmium ion transport	transport	P	Bile pigment transporter 1
ruditapes_c23509	transport	transport	P	Bile pigment transporter 1
ruditapes_c23509	ATP catabolic process	other metabolic processes	P	Bile pigment transporter 1
ruditapes_c23509	transmembrane transport	transport	P	Bile pigment transporter 1
ruditapes_c6203	transport	transport	P	Serum albumin B (74 kDa serum albumin)
ruditapes_c27450	metabolic process	other metabolic processes	P	"Propionyl-CoA carboxylase alpha chain, mitochondrial (PCCase subunit alpha) (EC 6.4.1.3) (Propanoyl-CoA:carbon dioxide ligase subunit alpha)"
ruditapes_c27450	fatty acid catabolic process	other metabolic processes	P	"Propionyl-CoA carboxylase alpha chain, mitochondrial (PCCase subunit alpha) (EC 6.4.1.3) (Propanoyl-CoA:carbon dioxide ligase subunit alpha)"
ruditapes_c27450	cellular amino acid catabolic process	other metabolic processes	P	"Propionyl-CoA carboxylase alpha chain, mitochondrial (PCCase subunit alpha) (EC 6.4.1.3) (Propanoyl-CoA:carbon dioxide ligase subunit alpha)"
ruditapes2_c2665	carbohydrate metabolic process	other metabolic processes	P	"Alpha-amylase 3 (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c2665	metabolic process	other metabolic processes	P	"Alpha-amylase 3 (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c15429	nucleosome positioning	cell organization and biogenesis	P	General transcriptional corepressor CYC8 (Glucose repression mediator protein CYC8)
ruditapes_c15429	"transcription, DNA-dependent"	RNA metabolism	P	General transcriptional corepressor CYC8 (Glucose repression mediator protein CYC8)
ruditapes_c15429	"regulation of transcription, DNA-dependent"	RNA metabolism	P	General transcriptional corepressor CYC8 (Glucose repression mediator protein CYC8)
ruditapes_c15429	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	General transcriptional corepressor CYC8 (Glucose repression mediator protein CYC8)
ruditapes_c5930	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc39288	oxidation reduction	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc6003	oxidation reduction	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_c5930	oxidation reduction	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc6003	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc6003	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_c5930	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc39288	oxidative phosphorylation	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc39288	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc39288	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc6003	transport	transport	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_c5930	oxidative phosphorylation	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_c5930	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc39288	aerobic respiration	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc39288	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_c5930	aerobic respiration	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc6003	aerobic respiration	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_lrc39288	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc6003	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes2_lrc6003	oxidative phosphorylation	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_c5930	respiratory electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (QP-C) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)
ruditapes_c22980	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c22980	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c22980	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c22980	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c22980	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c22980	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c7792	interspecies interaction between organisms	other biological processes	P	Nuclear shuttle protein (NSP) (29.4 kDa protein) (Protein BR1) (Protein BV1)
ruditapes_c7792	transport	transport	P	Nuclear shuttle protein (NSP) (29.4 kDa protein) (Protein BR1) (Protein BV1)
ruditapes_c7792	"spread of virus within host, cell to cell"	other biological processes	P	Nuclear shuttle protein (NSP) (29.4 kDa protein) (Protein BR1) (Protein BV1)
ruditapes_c7792	DNA transport	transport	P	Nuclear shuttle protein (NSP) (29.4 kDa protein) (Protein BR1) (Protein BV1)
ruditapes_c29713	DNA restriction-modification system	DNA metabolism	P	5-methylcytosine-specific restriction enzyme B (EC 3.1.21.-) (EcoKMcrBC)
ruditapes_c29713	ATP catabolic process	other metabolic processes	P	5-methylcytosine-specific restriction enzyme B (EC 3.1.21.-) (EcoKMcrBC)
ruditapes_lrc20384	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	organ morphogenesis	developmental processes	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	MAPKKK cascade	signal transduction	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	positive regulation of gene expression	other metabolic processes	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	fibroblast growth factor receptor signaling pathway	signal transduction	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	small GTPase mediated signal transduction	signal transduction	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	synaptic transmission	cell-cell signaling	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	anti-apoptosis	death	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	nerve growth factor receptor signaling pathway	signal transduction	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	response to peptide hormone stimulus	other biological processes	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	positive regulation of ERK1 and ERK2 cascade	signal transduction	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	activation of MAPKK activity	protein metabolism	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	signal transduction	signal transduction	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	negative regulation of neuron apoptosis	death	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	negative regulation of apoptosis	death	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	response to cAMP	other biological processes	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_lrc20384	activation of MAPKK activity	signal transduction	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
ruditapes_c4309	regulation of angiotensin levels in blood	protein metabolism	P	Mast cell carboxypeptidase A (MC-CPA) (EC 3.4.17.1) (Carboxypeptidase A3)
ruditapes_c4309	proteolysis	protein metabolism	P	Mast cell carboxypeptidase A (MC-CPA) (EC 3.4.17.1) (Carboxypeptidase A3)
ruditapes_c717	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes_c717	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c717	response to bacterium	other biological processes	P	Elongation factor 2 (EF-2)
ruditapes_c717	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_lrc33880	translation	protein metabolism	P	60S ribosomal protein L5-A
ruditapes_lrc33492	translation	protein metabolism	P	60S ribosomal protein L5-A
ruditapes_c8708	exogenous drug catabolic process	other metabolic processes	P	Cytochrome P450 4B1 (EC 1.14.14.1) (CYPIVB1) (Cytochrome P450 L-2) (Cytochrome P450 isozyme 5)
ruditapes_c8708	oxidation reduction	other metabolic processes	P	Cytochrome P450 4B1 (EC 1.14.14.1) (CYPIVB1) (Cytochrome P450 L-2) (Cytochrome P450 isozyme 5)
ruditapes_c8708	cellular aromatic compound metabolic process	other metabolic processes	P	Cytochrome P450 4B1 (EC 1.14.14.1) (CYPIVB1) (Cytochrome P450 L-2) (Cytochrome P450 isozyme 5)
ruditapes_c8708	fluorene metabolic process	other metabolic processes	P	Cytochrome P450 4B1 (EC 1.14.14.1) (CYPIVB1) (Cytochrome P450 L-2) (Cytochrome P450 isozyme 5)
ruditapes_c8708	biphenyl metabolic process	other metabolic processes	P	Cytochrome P450 4B1 (EC 1.14.14.1) (CYPIVB1) (Cytochrome P450 L-2) (Cytochrome P450 isozyme 5)
ruditapes_c10503	interspecies interaction between organisms	other biological processes	P	Aminopeptidase N (AP-N) (pAPN) (EC 3.4.11.2) (Alanyl aminopeptidase) (Aminopeptidase M) (AP-M) (Microsomal aminopeptidase) (gp130) (CD antigen CD13)
ruditapes_c10503	proteolysis	protein metabolism	P	Aminopeptidase N (AP-N) (pAPN) (EC 3.4.11.2) (Alanyl aminopeptidase) (Aminopeptidase M) (AP-M) (Microsomal aminopeptidase) (gp130) (CD antigen CD13)
ruditapes_c10503	multicellular organismal development	developmental processes	P	Aminopeptidase N (AP-N) (pAPN) (EC 3.4.11.2) (Alanyl aminopeptidase) (Aminopeptidase M) (AP-M) (Microsomal aminopeptidase) (gp130) (CD antigen CD13)
ruditapes_c10503	angiogenesis	developmental processes	P	Aminopeptidase N (AP-N) (pAPN) (EC 3.4.11.2) (Alanyl aminopeptidase) (Aminopeptidase M) (AP-M) (Microsomal aminopeptidase) (gp130) (CD antigen CD13)
ruditapes_c10503	cell differentiation	other biological processes	P	Aminopeptidase N (AP-N) (pAPN) (EC 3.4.11.2) (Alanyl aminopeptidase) (Aminopeptidase M) (AP-M) (Microsomal aminopeptidase) (gp130) (CD antigen CD13)
ruditapes_c37655	complement activation	stress response	P	Calcium-dependent serine proteinase (CASP) (EC 3.4.21.-) [Cleaved into: Calcium-dependent serine proteinase heavy chain; Calcium-dependent serine proteinase light chain]
ruditapes_c37655	complement activation	protein metabolism	P	Calcium-dependent serine proteinase (CASP) (EC 3.4.21.-) [Cleaved into: Calcium-dependent serine proteinase heavy chain; Calcium-dependent serine proteinase light chain]
ruditapes_c37655	proteolysis	protein metabolism	P	Calcium-dependent serine proteinase (CASP) (EC 3.4.21.-) [Cleaved into: Calcium-dependent serine proteinase heavy chain; Calcium-dependent serine proteinase light chain]
ruditapes_c3009	positive regulation of cell proliferation	cell cycle and proliferation	P	Interleukin-9 (IL-9) (Cytokine P40) (T-cell growth factor P40)
ruditapes_c3009	positive regulation of cell growth	other biological processes	P	Interleukin-9 (IL-9) (Cytokine P40) (T-cell growth factor P40)
ruditapes_c3009	immune response	other biological processes	P	Interleukin-9 (IL-9) (Cytokine P40) (T-cell growth factor P40)
ruditapes_c3009	positive regulation of interleukin-5 biosynthetic process	other metabolic processes	P	Interleukin-9 (IL-9) (Cytokine P40) (T-cell growth factor P40)
ruditapes_c3009	inflammatory response	stress response	P	Interleukin-9 (IL-9) (Cytokine P40) (T-cell growth factor P40)
ruditapes2_c183	protein stabilization	protein metabolism	P	Calreticulin (CRP55) (Calregulin) (Endoplasmic reticulum resident protein 60) (ERp60) (HACBP)
ruditapes2_c183	protein folding	protein metabolism	P	Calreticulin (CRP55) (Calregulin) (Endoplasmic reticulum resident protein 60) (ERp60) (HACBP)
ruditapes_c2980	protein stabilization	protein metabolism	P	Calreticulin (CRP55) (Calregulin) (Endoplasmic reticulum resident protein 60) (ERp60) (HACBP)
ruditapes_c2980	protein folding	protein metabolism	P	Calreticulin (CRP55) (Calregulin) (Endoplasmic reticulum resident protein 60) (ERp60) (HACBP)
ruditapes_c12269	lipid catabolic process	other metabolic processes	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	steroid metabolic process	other metabolic processes	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	female pregnancy	other biological processes	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	lipid metabolic process	other metabolic processes	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	transcription initiation from RNA polymerase I promoter	RNA metabolism	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	metabolic process	other metabolic processes	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	response to drug	other biological processes	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	transcription initiation from RNA polymerase I promoter	cell organization and biogenesis	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	cholesterol metabolic process	other metabolic processes	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	diacylglycerol catabolic process	other metabolic processes	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	triglyceride catabolic process	other metabolic processes	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	termination of RNA polymerase I transcription	RNA metabolism	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c12269	termination of RNA polymerase I transcription	cell organization and biogenesis	P	Hormone-sensitive lipase (HSL) (EC 3.1.1.79)
ruditapes_c9284	cellulose catabolic process	other metabolic processes	P	"Putative endoglucanase X (EGX) (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Fragment)"
ruditapes_c9284	metabolic process	other metabolic processes	P	"Putative endoglucanase X (EGX) (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Fragment)"
ruditapes_c9284	polysaccharide catabolic process	other metabolic processes	P	"Putative endoglucanase X (EGX) (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Fragment)"
ruditapes_c9284	carbohydrate metabolic process	other metabolic processes	P	"Putative endoglucanase X (EGX) (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Fragment)"
ruditapes_c24460	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	"Voltage-dependent L-type calcium channel subunit alpha-1C (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) (CACB-receptor) (Voltage-gated calcium channel subunit alpha Cav1.2)"
ruditapes_c24460	transmembrane calcium ion transport	transport	P	"Voltage-dependent L-type calcium channel subunit alpha-1C (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) (CACB-receptor) (Voltage-gated calcium channel subunit alpha Cav1.2)"
ruditapes_c24460	transmembrane transport	transport	P	"Voltage-dependent L-type calcium channel subunit alpha-1C (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) (CACB-receptor) (Voltage-gated calcium channel subunit alpha Cav1.2)"
ruditapes_c24460	elevation of cytosolic calcium ion concentration	other biological processes	P	"Voltage-dependent L-type calcium channel subunit alpha-1C (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) (CACB-receptor) (Voltage-gated calcium channel subunit alpha Cav1.2)"
ruditapes_c24460	regulation of transmembrane ion transport	transport	P	"Voltage-dependent L-type calcium channel subunit alpha-1C (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) (CACB-receptor) (Voltage-gated calcium channel subunit alpha Cav1.2)"
ruditapes_c24460	transport	transport	P	"Voltage-dependent L-type calcium channel subunit alpha-1C (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) (CACB-receptor) (Voltage-gated calcium channel subunit alpha Cav1.2)"
ruditapes_c24460	calcium ion transport	transport	P	"Voltage-dependent L-type calcium channel subunit alpha-1C (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) (CACB-receptor) (Voltage-gated calcium channel subunit alpha Cav1.2)"
ruditapes_c24460	ion transport	transport	P	"Voltage-dependent L-type calcium channel subunit alpha-1C (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) (CACB-receptor) (Voltage-gated calcium channel subunit alpha Cav1.2)"
ruditapes_s37691	transport	transport	P	Sodium channel protein type 5 subunit alpha (Sodium channel protein cardiac muscle subunit alpha) (Sodium channel protein type V subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.5)
ruditapes_s37691	sodium ion transport	transport	P	Sodium channel protein type 5 subunit alpha (Sodium channel protein cardiac muscle subunit alpha) (Sodium channel protein type V subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.5)
ruditapes_s37691	regulation of transmembrane ion transport	transport	P	Sodium channel protein type 5 subunit alpha (Sodium channel protein cardiac muscle subunit alpha) (Sodium channel protein type V subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.5)
ruditapes_s37691	transmembrane transport	transport	P	Sodium channel protein type 5 subunit alpha (Sodium channel protein cardiac muscle subunit alpha) (Sodium channel protein type V subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.5)
ruditapes_s37691	ion transport	transport	P	Sodium channel protein type 5 subunit alpha (Sodium channel protein cardiac muscle subunit alpha) (Sodium channel protein type V subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.5)
ruditapes_c17438	metabolic process	other metabolic processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 3 (E-NPP 3) (Phosphodiesterase I beta) (PD-Ibeta) (Phosphodiesterase I/nucleotide pyrophosphatase 3) (CD antigen CD203c) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyrophosphatase (NPPase) (EC 3.6.1.9)]
ruditapes_c17438	immune response	other biological processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 3 (E-NPP 3) (Phosphodiesterase I beta) (PD-Ibeta) (Phosphodiesterase I/nucleotide pyrophosphatase 3) (CD antigen CD203c) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyrophosphatase (NPPase) (EC 3.6.1.9)]
ruditapes_c14969	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c14969	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c14969	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_lrc38689	proteolysis	protein metabolism	P	Protease 1 (EC 3.4.21.50) (API) (Lysyl endopeptidase) (Protease I)
ruditapes_c14532	carbohydrate transport	transport	P	Maltose permease MAL61 (Maltose transport protein MAL61)
ruditapes_c14532	transport	transport	P	Maltose permease MAL61 (Maltose transport protein MAL61)
ruditapes_c14532	maltose metabolic process	other metabolic processes	P	Maltose permease MAL61 (Maltose transport protein MAL61)
ruditapes_c14532	transmembrane transport	transport	P	Maltose permease MAL61 (Maltose transport protein MAL61)
ruditapes_c16476	dephosphorylation	other metabolic processes	P	Intestinal-type alkaline phosphatase 1 (IAP-1) (Intestinal alkaline phosphatase 1) (EC 3.1.3.1) (Intestinal alkaline phosphatase I) (IAP-I)
ruditapes_c16476	metabolic process	other metabolic processes	P	Intestinal-type alkaline phosphatase 1 (IAP-1) (Intestinal alkaline phosphatase 1) (EC 3.1.3.1) (Intestinal alkaline phosphatase I) (IAP-I)
ruditapes_c16476	phosphorus metabolic process	other metabolic processes	P	Intestinal-type alkaline phosphatase 1 (IAP-1) (Intestinal alkaline phosphatase 1) (EC 3.1.3.1) (Intestinal alkaline phosphatase I) (IAP-I)
ruditapes_c11819	apoptosis	death	P	Envelope small membrane protein (E protein) (sM protein)
ruditapes_c16308	nucleosome assembly	cell organization and biogenesis	P	Histone H1.2 (Histone H1-like protein 2)
ruditapes_c16472	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 40 (Cirhin interaction protein) (CIRIP) (Gate keeper of apoptosis-activating protein) (GAAP) (Human immunodeficiency virus type I enhancer-binding protein 1) (HIV-EP1) (Major histocompatibility complex-binding protein 1) (MBP-1) (Positive regulatory domain II-binding factor 1) (PRDII-BF1)
ruditapes_c16472	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 40 (Cirhin interaction protein) (CIRIP) (Gate keeper of apoptosis-activating protein) (GAAP) (Human immunodeficiency virus type I enhancer-binding protein 1) (HIV-EP1) (Major histocompatibility complex-binding protein 1) (MBP-1) (Positive regulatory domain II-binding factor 1) (PRDII-BF1)
ruditapes_c16472	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 40 (Cirhin interaction protein) (CIRIP) (Gate keeper of apoptosis-activating protein) (GAAP) (Human immunodeficiency virus type I enhancer-binding protein 1) (HIV-EP1) (Major histocompatibility complex-binding protein 1) (MBP-1) (Positive regulatory domain II-binding factor 1) (PRDII-BF1)
ruditapes_c16472	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Zinc finger protein 40 (Cirhin interaction protein) (CIRIP) (Gate keeper of apoptosis-activating protein) (GAAP) (Human immunodeficiency virus type I enhancer-binding protein 1) (HIV-EP1) (Major histocompatibility complex-binding protein 1) (MBP-1) (Positive regulatory domain II-binding factor 1) (PRDII-BF1)
ruditapes_c20210	mRNA transport	transport	P	Protein Rev (Regulator of expression of viral proteins)
ruditapes_c20210	transport	transport	P	Protein Rev (Regulator of expression of viral proteins)
ruditapes_c20210	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein Rev (Regulator of expression of viral proteins)
ruditapes_c7529	nucleosome assembly	cell organization and biogenesis	P	Histone H1-delta
ruditapes_c226	gene expression	other metabolic processes	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	translational elongation	protein metabolism	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	viral reproduction	other biological processes	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	translational termination	protein metabolism	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	translational termination	cell organization and biogenesis	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	RNA metabolic process	RNA metabolism	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	mRNA metabolic process	RNA metabolism	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	viral transcription	RNA metabolism	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	viral infectious cycle	other biological processes	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	SRP-dependent cotranslational protein targeting to membrane	transport	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	translation	protein metabolism	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	cellular protein metabolic process	protein metabolism	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c226	translational initiation	protein metabolism	P	40S ribosomal protein S2 (40S ribosomal protein S4) (Protein LLRep3)
ruditapes_c6175	pathogenesis	other biological processes	P	Protein p74
ruditapes_c6175	viral infectious cycle	other biological processes	P	Protein p74
ruditapes_c348	transport	transport	P	"Phosphate carrier protein, mitochondrial (Phosphate transport protein) (PTP) (Solute carrier family 25 member 3)"
ruditapes_c15172	protein amino acid phosphorylation	protein metabolism	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c15172	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c15172	multicellular organismal development	developmental processes	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c15172	phosphorylation	other metabolic processes	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c26450	cGMP biosynthetic process	other metabolic processes	P	Speract receptor (EC 4.6.1.2) (Guanylate cyclase)
ruditapes_c26450	cyclic nucleotide biosynthetic process	other metabolic processes	P	Speract receptor (EC 4.6.1.2) (Guanylate cyclase)
ruditapes_c26450	protein amino acid phosphorylation	protein metabolism	P	Speract receptor (EC 4.6.1.2) (Guanylate cyclase)
ruditapes_c17111	platelet degranulation	transport	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	blood vessel morphogenesis	developmental processes	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	cell adhesion	cell adhesion	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	heterophilic cell adhesion	cell adhesion	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	regulation of cellular extravasation	other biological processes	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	inflammatory response	stress response	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	defense response to Gram-negative bacterium	stress response	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	response to lipopolysaccharide	other biological processes	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	blood coagulation	stress response	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	response to organic cyclic substance	other biological processes	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	positive regulation of cell adhesion	cell adhesion	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	leukocyte adhesion	cell adhesion	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	positive regulation of leukocyte migration	other biological processes	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	leukocyte tethering or rolling	cell adhesion	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	positive regulation of platelet activation	stress response	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	leukocyte migration	other biological processes	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	cell-cell adhesion	cell adhesion	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_c17111	platelet activation	stress response	P	P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
ruditapes_lrc37279	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c29835	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38987	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36568	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc37279	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36568	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc37279	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36568	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c29835	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38987	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38987	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c29835	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36568	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc37279	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c29835	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38987	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (L-34 galactoside-binding lectin) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c25521	pathogenesis	other biological processes	P	Toxin A
ruditapes_c23379	isoprenoid biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c23379	lipid biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c23379	cholesterol biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c23379	coenzyme A metabolic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c23379	oxidation reduction	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c23379	sterol biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c23379	steroid biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c21915	response to drug	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	positive regulation of proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	autolysis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	response to calcium ion	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	metabolic process	other metabolic processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	negative regulation of apoptosis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	response to muscle activity	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	protein complex assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	myofibril assembly	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	myofibril assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	positive regulation of satellite cell activation involved in skeletal muscle regeneration	stress response	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	positive regulation of satellite cell activation involved in skeletal muscle regeneration	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	sarcomere organization	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	sarcomere organization	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c21915	regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_s39925	proteolysis	protein metabolism	P	Coagulation factor IX (EC 3.4.21.22) (Christmas factor) [Cleaved into: Coagulation factor IXa light chain; Coagulation factor IXa heavy chain] (Fragment)
ruditapes_s39925	blood coagulation	stress response	P	Coagulation factor IX (EC 3.4.21.22) (Christmas factor) [Cleaved into: Coagulation factor IXa light chain; Coagulation factor IXa heavy chain] (Fragment)
ruditapes_c21085	proteolysis	protein metabolism	P	Coagulation factor IX (EC 3.4.21.22) (Christmas factor) (Fragment)
ruditapes_c21085	blood coagulation	stress response	P	Coagulation factor IX (EC 3.4.21.22) (Christmas factor) (Fragment)
ruditapes_c21085	metabolic process	other metabolic processes	P	Coagulation factor IX (EC 3.4.21.22) (Christmas factor) (Fragment)
ruditapes_c16796	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 59 (Zfp-59) (Zinc finger protein Mfg-2)
ruditapes2_c1055	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM (Retrovirus-related Pol polyprotein from type II retrotransposable element R2DM) [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c24357	proteolysis	protein metabolism	P	Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM (Retrovirus-related Pol polyprotein from type II retrotransposable element R2DM) [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c24357	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM (Retrovirus-related Pol polyprotein from type II retrotransposable element R2DM) [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes2_c1055	proteolysis	protein metabolism	P	Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM (Retrovirus-related Pol polyprotein from type II retrotransposable element R2DM) [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c12243	RNA-dependent DNA replication	DNA metabolism	P	Putative 115 kDa protein in type-1 retrotransposable element R1DM (ORF 2) (Putative 115 kDa protein in type I retrotransposable element R1DM)
ruditapes_c12414	RNA-dependent DNA replication	DNA metabolism	P	Putative 115 kDa protein in type-1 retrotransposable element R1DM (ORF 2) (Putative 115 kDa protein in type I retrotransposable element R1DM)
ruditapes_c9917	insulin processing	protein metabolism	P	Neuroendocrine convertase 2 (NEC 2) (EC 3.4.21.94) (KEX2-like endoprotease 2) (Prohormone convertase 2) (Proprotein convertase 2) (PC2)
ruditapes_c9917	nervous system development	developmental processes	P	Neuroendocrine convertase 2 (NEC 2) (EC 3.4.21.94) (KEX2-like endoprotease 2) (Prohormone convertase 2) (Proprotein convertase 2) (PC2)
ruditapes_c9917	protein processing	protein metabolism	P	Neuroendocrine convertase 2 (NEC 2) (EC 3.4.21.94) (KEX2-like endoprotease 2) (Prohormone convertase 2) (Proprotein convertase 2) (PC2)
ruditapes_c9917	protein autoprocessing	protein metabolism	P	Neuroendocrine convertase 2 (NEC 2) (EC 3.4.21.94) (KEX2-like endoprotease 2) (Prohormone convertase 2) (Proprotein convertase 2) (PC2)
ruditapes_c9917	proteolysis	protein metabolism	P	Neuroendocrine convertase 2 (NEC 2) (EC 3.4.21.94) (KEX2-like endoprotease 2) (Prohormone convertase 2) (Proprotein convertase 2) (PC2)
ruditapes_c9917	islet amyloid polypeptide processing	protein metabolism	P	Neuroendocrine convertase 2 (NEC 2) (EC 3.4.21.94) (KEX2-like endoprotease 2) (Prohormone convertase 2) (Proprotein convertase 2) (PC2)
ruditapes_c9917	enkephalin processing	protein metabolism	P	Neuroendocrine convertase 2 (NEC 2) (EC 3.4.21.94) (KEX2-like endoprotease 2) (Prohormone convertase 2) (Proprotein convertase 2) (PC2)
ruditapes_c9917	peptide hormone processing	protein metabolism	P	Neuroendocrine convertase 2 (NEC 2) (EC 3.4.21.94) (KEX2-like endoprotease 2) (Prohormone convertase 2) (Proprotein convertase 2) (PC2)
ruditapes_c24442	aromatic amino acid family biosynthetic process	other metabolic processes	P	Tryptophan synthase beta chain (EC 4.2.1.20)
ruditapes_c24442	tryptophan metabolic process	other metabolic processes	P	Tryptophan synthase beta chain (EC 4.2.1.20)
ruditapes_c24442	cellular amino acid biosynthetic process	other metabolic processes	P	Tryptophan synthase beta chain (EC 4.2.1.20)
ruditapes_c24442	metabolic process	other metabolic processes	P	Tryptophan synthase beta chain (EC 4.2.1.20)
ruditapes_c24442	tryptophan biosynthetic process	other metabolic processes	P	Tryptophan synthase beta chain (EC 4.2.1.20)
ruditapes_c18116	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c18116	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c18116	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c19189	axon target recognition	developmental processes	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	axon target recognition	cell organization and biogenesis	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	cell adhesion	cell adhesion	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	retinal ganglion cell axon guidance	developmental processes	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	retinal ganglion cell axon guidance	cell organization and biogenesis	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	oogenesis	other biological processes	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	regulation of cell shape	cell organization and biogenesis	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	dephosphorylation	other metabolic processes	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	synaptic growth at neuromuscular junction	developmental processes	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	axon guidance	developmental processes	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	axon guidance	cell organization and biogenesis	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	R7 cell development	developmental processes	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	embryonic development via the syncytial blastoderm	developmental processes	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	protein amino acid dephosphorylation	protein metabolism	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	nervous system development	developmental processes	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	photoreceptor cell morphogenesis	developmental processes	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	photoreceptor cell morphogenesis	cell organization and biogenesis	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	motor axon guidance	developmental processes	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes_c19189	motor axon guidance	cell organization and biogenesis	P	Tyrosine-protein phosphatase Lar (EC 3.1.3.48) (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
ruditapes2_lrc6067	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine protein kinase UL97 (EC 2.7.1.-) (Ganciclovir kinase) (HSRF3 protein)
ruditapes2_lrc6067	viral reproduction	other biological processes	P	Serine/threonine protein kinase UL97 (EC 2.7.1.-) (Ganciclovir kinase) (HSRF3 protein)
ruditapes2_lrc6067	phosphorylation	other metabolic processes	P	Serine/threonine protein kinase UL97 (EC 2.7.1.-) (Ganciclovir kinase) (HSRF3 protein)
ruditapes_c11606	regulation of gene expression	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	response to lipopolysaccharide	other biological processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	follicular B cell differentiation	developmental processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	B cell receptor signaling pathway	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	inositol trisphosphate biosynthetic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	activation of store-operated calcium channel activity	transport	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	platelet activation	stress response	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	elevation of cytosolic calcium ion concentration	other biological processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	lipid catabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	blood coagulation	stress response	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	response to magnesium ion	other biological processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	phosphatidylinositol biosynthetic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	release of sequestered calcium ion into cytosol	transport	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	response to ATP	other biological processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	B cell differentiation	developmental processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	lipid metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	calcium-mediated signaling	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	negative regulation of programmed cell death	death	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	T cell receptor signaling pathway	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	phospholipid catabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c11606	signal transduction	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 (EC 3.1.4.11) (Phosphoinositide phospholipase C-gamma-2) (Phospholipase C-IV) (PLC-IV) (Phospholipase C-gamma-2) (PLC-gamma-2)"
ruditapes_c13875	negative regulation of peptidase activity	other biological processes	P	Elastase inhibitor
ruditapes2_lrc3761	negative regulation of peptidase activity	other biological processes	P	Elastase inhibitor
ruditapes_lrc12852	imaginal disc-derived wing morphogenesis	developmental processes	P	Protein kinase DC2 (EC 2.7.11.1)
ruditapes_lrc12852	phosphorylation	other metabolic processes	P	Protein kinase DC2 (EC 2.7.11.1)
ruditapes_lrc12852	protein amino acid phosphorylation	protein metabolism	P	Protein kinase DC2 (EC 2.7.11.1)
ruditapes_c16055	peroxisomal long-chain fatty acid import	transport	P	ATP-binding cassette sub-family D member 3 (70 kDa peroxisomal membrane protein) (PMP70)
ruditapes_c16055	response to chemical stimulus	other biological processes	P	ATP-binding cassette sub-family D member 3 (70 kDa peroxisomal membrane protein) (PMP70)
ruditapes_c16055	transport	transport	P	ATP-binding cassette sub-family D member 3 (70 kDa peroxisomal membrane protein) (PMP70)
ruditapes_c16055	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family D member 3 (70 kDa peroxisomal membrane protein) (PMP70)
ruditapes_c16055	response to drug	other biological processes	P	ATP-binding cassette sub-family D member 3 (70 kDa peroxisomal membrane protein) (PMP70)
ruditapes_c16055	transmembrane transport	transport	P	ATP-binding cassette sub-family D member 3 (70 kDa peroxisomal membrane protein) (PMP70)
ruditapes_c30910	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 182 (Zinc finger protein 21) (Zinc finger protein KOX14)
ruditapes_c30910	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 182 (Zinc finger protein 21) (Zinc finger protein KOX14)
ruditapes_c36518	translation	protein metabolism	P	60S ribosomal protein L35
ruditapes_c38334	translation	protein metabolism	P	60S ribosomal protein L35
ruditapes_c422	translation	protein metabolism	P	60S ribosomal protein L35
ruditapes_s38158	translation	protein metabolism	P	60S ribosomal protein L35
ruditapes_c34966	translation	protein metabolism	P	60S ribosomal protein L35
ruditapes_c30722	regulation of small GTPase mediated signal transduction	signal transduction	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10) (Ras-like protein family member 7A)
ruditapes_c30722	positive regulation of filopodium assembly	cell organization and biogenesis	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10) (Ras-like protein family member 7A)
ruditapes_c30722	regulation of actin cytoskeleton organization	cell organization and biogenesis	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10) (Ras-like protein family member 7A)
ruditapes_c30722	cellular response to insulin stimulus	other biological processes	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10) (Ras-like protein family member 7A)
ruditapes_c30722	regulation of cell shape	cell organization and biogenesis	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10) (Ras-like protein family member 7A)
ruditapes_c30722	cortical actin cytoskeleton organization	cell organization and biogenesis	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10) (Ras-like protein family member 7A)
ruditapes_c30722	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10) (Ras-like protein family member 7A)
ruditapes_c30722	insulin receptor signaling pathway	signal transduction	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10) (Ras-like protein family member 7A)
ruditapes_c30722	GTP catabolic process	other metabolic processes	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10) (Ras-like protein family member 7A)
ruditapes_c30722	small GTPase mediated signal transduction	signal transduction	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10) (Ras-like protein family member 7A)
ruditapes_c30722	positive regulation of glucose import	transport	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10) (Ras-like protein family member 7A)
ruditapes_c27963	meiosis	cell cycle and proliferation	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c27963	cell cycle	cell cycle and proliferation	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c27963	nuclear migration during conjugation with cellular fusion	cell organization and biogenesis	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c27963	cell division	other biological processes	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c27963	mitosis	cell organization and biogenesis	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c27963	karyogamy	cell organization and biogenesis	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c27963	nuclear migration during conjugation with cellular fusion	transport	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c27963	karyogamy during conjugation with cellular fusion	cell organization and biogenesis	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c27963	mitosis	cell cycle and proliferation	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c27963	mitotic sister chromatid cohesion	cell cycle and proliferation	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c27963	mitotic sister chromatid cohesion	cell organization and biogenesis	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c27963	microtubule-based movement	other biological processes	P	Kinesin-like protein KAR3 (Nuclear fusion protein)
ruditapes_c14484	DNA replication	DNA metabolism	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c14484	metabolic process	other metabolic processes	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c14484	RNA-dependent DNA replication	DNA metabolism	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c19740	response to cocaine	other biological processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	positive regulation of protein amino acid dephosphorylation	protein metabolism	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	response to drug	other biological processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	cell death	death	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	cell death	death	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	glycosphingolipid metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	positive regulation of apoptosis	death	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	nervous system development	developmental processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	signal transduction	signal transduction	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	negative regulation of MAP kinase activity	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	sphingomyelin metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	negative regulation of MAP kinase activity	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	sphingolipid metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	ceramide biosynthetic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	sphingomyelin catabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	sphingomyelin catabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	response to drug	other biological processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	positive regulation of apoptosis	death	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	ceramide biosynthetic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	sphingomyelin metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	sphingolipid metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	positive regulation of protein amino acid dephosphorylation	protein metabolism	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	response to cocaine	other biological processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	signal transduction	signal transduction	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c19740	nervous system development	developmental processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c16504	glycosphingolipid metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase (EC 3.1.4.12) (Acid sphingomyelinase) (aSMase)
ruditapes_c21249	oxidation reduction	other metabolic processes	P	Alanine dehydrogenase (EC 1.4.1.1)
ruditapes2_lrc6813	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P1) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6813	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P1) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6813	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P1) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6813	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P1) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6813	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P1) (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6813	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATP synthase proteolipid P1) (ATPase protein 9) (ATPase subunit c)"
ruditapes_c15067	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase (EC 2.7.11.1)
ruditapes_c15067	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase (EC 2.7.11.1)
ruditapes_c16524	metabolic process	other metabolic processes	P	Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)]
ruditapes_c16524	oxidation reduction	other metabolic processes	P	Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)]
ruditapes_c16524	riboflavin biosynthetic process	other metabolic processes	P	Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)]
ruditapes_c8520	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	"molting cycle, chitin-based cuticle"	other biological processes	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	oogenesis	other biological processes	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	"ecdysis, chitin-based cuticle"	other biological processes	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	"transcription, DNA-dependent"	RNA metabolism	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	intracellular receptor-mediated signaling pathway	signal transduction	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	steroid hormone mediated signaling	signal transduction	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	antimicrobial humoral response	other biological processes	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	multicellular organismal development	developmental processes	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	regulation of ecdysteroid metabolic process	other metabolic processes	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	regulation of ecdysteroid metabolic process	developmental processes	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	ecdysone-mediated induction of salivary gland cell autophagic cell death	developmental processes	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c8520	ecdysone-mediated induction of salivary gland cell autophagic cell death	death	P	"Ecdysone-induced protein 75B, isoforms C/D (E75-A) (Nuclear receptor subfamily 1 group D member 3, isoforms C/D)"
ruditapes_c1367	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_c1367	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_c1367	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_c1367	response to oxidative stress	stress response	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_c10277	negative regulation of peptidase activity	other biological processes	P	Tick anticoagulant peptide (TAP)
ruditapes2_lrc5523	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin A) (Cyclosporin A-binding protein) (Rotamase A) (SP18)
ruditapes2_lrc5523	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin A) (Cyclosporin A-binding protein) (Rotamase A) (SP18)
ruditapes2_lrc5523	regulation of viral genome replication	other biological processes	P	Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin A) (Cyclosporin A-binding protein) (Rotamase A) (SP18)
ruditapes_c25675	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c25675	glyceraldehyde-3-phosphate metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c25675	glucose metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c25675	multicellular organismal development	developmental processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c25675	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c25675	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c25675	embryonic development	developmental processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c25675	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_lrc19458	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_lrc19458	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_lrc19458	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_lrc19458	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_lrc19458	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c1619	vesicle-mediated transport	transport	P	Clathrin light chain (CLC)
ruditapes2_c1619	endocytosis	transport	P	Clathrin light chain (CLC)
ruditapes2_c1619	endocytosis	cell organization and biogenesis	P	Clathrin light chain (CLC)
ruditapes2_c1619	intracellular protein transport	transport	P	Clathrin light chain (CLC)
ruditapes_c17122	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	glycosphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c17122	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c17122	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	sphingolipid catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c17122	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c17122	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c17122	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c17122	glycolipid catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c17122	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c17122	glycosphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c17122	sphingolipid catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c1969	glycolipid catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c17122	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_c17122	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) [Cleaved into: Ganglioside GM2 activator isoform short]
ruditapes_s35641	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40396	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36973	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37567	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc37076	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c3823	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37317	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40228	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2527	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35532	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37567	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37567	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37317	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36973	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2527	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2613	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c3823	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37567	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40396	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc37076	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40396	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37317	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c3823	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s36872	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2613	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2527	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc37076	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40396	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36973	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40396	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc37076	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40396	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2613	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35532	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35532	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s36872	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c3823	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35532	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s35641	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40228	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2527	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2527	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36973	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2613	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c3823	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37317	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40228	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37891	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s35641	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37891	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40228	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2613	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40228	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35532	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37317	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s35641	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37891	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37567	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35532	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s40228	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2613	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37891	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36973	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc37076	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s36872	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37567	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s36872	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c2527	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36973	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37891	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc37076	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37317	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s36872	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s35641	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37891	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c3823	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s36872	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s35641	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (Galactoside-binding protein) (GALBP) (IgE-binding protein) (L-31) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c987	lipid metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	estrogen metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	response to chemical stimulus	other biological processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes2_c987	regulation of blood pressure	other biological processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	response to chemical stimulus	other biological processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	lipid metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes2_c987	catecholamine metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	lipid metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	response to stress	stress response	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	response to stress	stress response	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	sulfation	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes2_c987	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes2_c987	steroid metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	drug metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	estrogen metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	drug metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes2_c987	4-nitrophenol metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	catecholamine metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	regulation of blood pressure	other biological processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	regulation of blood pressure	other biological processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes2_c987	sulfation	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	steroid metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	steroid metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	response to glucocorticoid stimulus	other biological processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	catecholamine metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c3506	4-nitrophenol metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	4-nitrophenol metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes2_c987	response to chemical stimulus	other biological processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	sulfation	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c22768	response to glucocorticoid stimulus	other biological processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes2_c987	estrogen metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes2_c987	response to glucocorticoid stimulus	other biological processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes2_c987	drug metabolic process	other metabolic processes	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes2_c987	response to stress	stress response	P	Sulfotransferase 1A1 (ST1A1) (EC 2.8.2.1) (Aryl sulfotransferase) (Aryl sulfotransferase IV) (ASTIV) (Minoxidil sulfotransferase) (Mx-ST) (PST-1) (Phenol sulfotransferase) (Sulfokinase) (Tyrosine-ester sulfotransferase)
ruditapes_c16407	protein amino acid phosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c16833	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c16407	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c16833	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c29402	insulin receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c16833	protein amino acid phosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c16833	insulin receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c16407	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c29402	protein amino acid phosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c29402	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c16407	insulin receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c29402	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48) (LCA-related phosphatase) (PTPTY-28)
ruditapes_c16665	transport	transport	P	Ras-related protein Rab-7a
ruditapes_c16665	epidermal growth factor ligand processing	signal transduction	P	Ras-related protein Rab-7a
ruditapes_c16665	epidermal growth factor ligand processing	protein metabolism	P	Ras-related protein Rab-7a
ruditapes_c16665	protein transport	transport	P	Ras-related protein Rab-7a
ruditapes_c16665	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-7a
ruditapes_c16665	GTP catabolic process	other metabolic processes	P	Ras-related protein Rab-7a
ruditapes_c16665	endosome to lysosome transport	transport	P	Ras-related protein Rab-7a
ruditapes_c13583	sarcomere organization	developmental processes	P	"Alpha-actinin, sarcomeric (F-actin cross-linking protein)"
ruditapes_c13583	sarcomere organization	cell organization and biogenesis	P	"Alpha-actinin, sarcomeric (F-actin cross-linking protein)"
ruditapes_c13583	actin cytoskeleton reorganization	cell organization and biogenesis	P	"Alpha-actinin, sarcomeric (F-actin cross-linking protein)"
ruditapes_c13583	flight behavior	other biological processes	P	"Alpha-actinin, sarcomeric (F-actin cross-linking protein)"
ruditapes_s39387	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 (CEP52) [Cleaved into: Ubiquitin; 60S ribosomal protein L40]
ruditapes_lrc21440	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 (CEP52) [Cleaved into: Ubiquitin; 60S ribosomal protein L40]
ruditapes_lrc38641	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 (CEP52) [Cleaved into: Ubiquitin; 60S ribosomal protein L40]
ruditapes_c20663	eye-antennal disc development	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	sensory organ development	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	imaginal disc-derived leg joint morphogenesis	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	multicellular organismal development	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	compound eye development	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	lymph gland crystal cell differentiation	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	Notch signaling pathway	signal transduction	P	Protein serrate (Protein beaded)
ruditapes_c20663	imaginal disc-derived wing morphogenesis	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	cell differentiation	other biological processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	cuticle pattern formation	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	salivary gland morphogenesis	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	larval salivary gland morphogenesis	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	germ-line stem cell maintenance	other biological processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	"dorsal/ventral lineage restriction, imaginal disc"	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	crystal cell differentiation	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	larval lymph gland hemopoiesis	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	cell communication	other biological processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	regulation of crystal cell differentiation	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	negative regulation of Notch signaling pathway	signal transduction	P	Protein serrate (Protein beaded)
ruditapes_c20663	salivary gland development	developmental processes	P	Protein serrate (Protein beaded)
ruditapes_c20663	lateral inhibition	cell-cell signaling	P	Protein serrate (Protein beaded)
ruditapes_c37826	cellular alcohol metabolic process	other metabolic processes	P	Glucose dehydrogenase [acceptor] (EC 1.1.99.10) [Cleaved into: Glucose dehydrogenase [acceptor] short protein]
ruditapes_c37826	oxidation reduction	other metabolic processes	P	Glucose dehydrogenase [acceptor] (EC 1.1.99.10) [Cleaved into: Glucose dehydrogenase [acceptor] short protein]
ruditapes_c16487	pathogenesis	other biological processes	P	Toxin B
ruditapes_s39589	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase FKBP1A (PPIase FKBP1A) (EC 5.2.1.8) (12 kDa FK506-binding protein) (12 kDa FKBP) (FKBP-12) (Calstabin-1) (FK506-binding protein 1A) (FKBP-1A) (Immunophilin FKBP12) (Rotamase)
ruditapes_s39589	T cell activation	other biological processes	P	Peptidyl-prolyl cis-trans isomerase FKBP1A (PPIase FKBP1A) (EC 5.2.1.8) (12 kDa FK506-binding protein) (12 kDa FKBP) (FKBP-12) (Calstabin-1) (FK506-binding protein 1A) (FKBP-1A) (Immunophilin FKBP12) (Rotamase)
ruditapes_s39589	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase FKBP1A (PPIase FKBP1A) (EC 5.2.1.8) (12 kDa FK506-binding protein) (12 kDa FKBP) (FKBP-12) (Calstabin-1) (FK506-binding protein 1A) (FKBP-1A) (Immunophilin FKBP12) (Rotamase)
ruditapes_s39589	peptidyl-proline modification	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase FKBP1A (PPIase FKBP1A) (EC 5.2.1.8) (12 kDa FK506-binding protein) (12 kDa FKBP) (FKBP-12) (Calstabin-1) (FK506-binding protein 1A) (FKBP-1A) (Immunophilin FKBP12) (Rotamase)
ruditapes_s39589	regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Peptidyl-prolyl cis-trans isomerase FKBP1A (PPIase FKBP1A) (EC 5.2.1.8) (12 kDa FK506-binding protein) (12 kDa FKBP) (FKBP-12) (Calstabin-1) (FK506-binding protein 1A) (FKBP-1A) (Immunophilin FKBP12) (Rotamase)
ruditapes_s39589	negative regulation of protein phosphatase type 2B activity	other metabolic processes	P	Peptidyl-prolyl cis-trans isomerase FKBP1A (PPIase FKBP1A) (EC 5.2.1.8) (12 kDa FK506-binding protein) (12 kDa FKBP) (FKBP-12) (Calstabin-1) (FK506-binding protein 1A) (FKBP-1A) (Immunophilin FKBP12) (Rotamase)
ruditapes_lrc39310	apoptosis	death	P	"ADP,ATP carrier protein 2 (ADP/ATP translocase 2) (Adenine nucleotide translocator 2) (ANT 2) (Petite colonies protein 9)"
ruditapes_lrc39310	transport	transport	P	"ADP,ATP carrier protein 2 (ADP/ATP translocase 2) (Adenine nucleotide translocator 2) (ANT 2) (Petite colonies protein 9)"
ruditapes_lrc39310	heme transport	transport	P	"ADP,ATP carrier protein 2 (ADP/ATP translocase 2) (Adenine nucleotide translocator 2) (ANT 2) (Petite colonies protein 9)"
ruditapes_lrc39310	mitochondrial transport	transport	P	"ADP,ATP carrier protein 2 (ADP/ATP translocase 2) (Adenine nucleotide translocator 2) (ANT 2) (Petite colonies protein 9)"
ruditapes_lrc39310	ADP transport	transport	P	"ADP,ATP carrier protein 2 (ADP/ATP translocase 2) (Adenine nucleotide translocator 2) (ANT 2) (Petite colonies protein 9)"
ruditapes_lrc39310	anaerobic respiration	other metabolic processes	P	"ADP,ATP carrier protein 2 (ADP/ATP translocase 2) (Adenine nucleotide translocator 2) (ANT 2) (Petite colonies protein 9)"
ruditapes_lrc39310	aerobic respiration	other metabolic processes	P	"ADP,ATP carrier protein 2 (ADP/ATP translocase 2) (Adenine nucleotide translocator 2) (ANT 2) (Petite colonies protein 9)"
ruditapes_lrc39310	transmembrane transport	transport	P	"ADP,ATP carrier protein 2 (ADP/ATP translocase 2) (Adenine nucleotide translocator 2) (ANT 2) (Petite colonies protein 9)"
ruditapes_lrc39310	ATP transport	transport	P	"ADP,ATP carrier protein 2 (ADP/ATP translocase 2) (Adenine nucleotide translocator 2) (ANT 2) (Petite colonies protein 9)"
ruditapes_c4909	aromatic amino acid family biosynthetic process	other metabolic processes	P	Anthranilate synthase component 1 (EC 4.1.3.27) (Anthranilate synthase component I)
ruditapes_c4909	biosynthetic process	other metabolic processes	P	Anthranilate synthase component 1 (EC 4.1.3.27) (Anthranilate synthase component I)
ruditapes_c4909	tryptophan biosynthetic process	other metabolic processes	P	Anthranilate synthase component 1 (EC 4.1.3.27) (Anthranilate synthase component I)
ruditapes_c4909	cellular amino acid biosynthetic process	other metabolic processes	P	Anthranilate synthase component 1 (EC 4.1.3.27) (Anthranilate synthase component I)
ruditapes_c810	cellular amino acid biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c810	tryptophan biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c810	metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c810	tryptophan metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c810	aromatic amino acid family biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_c1943	cytosolic calcium ion homeostasis	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	fibrinolysis	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	acute-phase response	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	negative regulation of astrocyte differentiation	developmental processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	wound healing	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	positive regulation of collagen biosynthetic process	other metabolic processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	proteolysis	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	positive regulation of blood coagulation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	metabolic process	other metabolic processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	positive regulation of phosphoinositide 3-kinase cascade	signal transduction	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	response to wounding	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	regulation of cell shape	cell organization and biogenesis	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	response to stress	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	positive regulation of cell proliferation	cell cycle and proliferation	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	negative regulation of proteolysis	protein metabolism	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	cell surface receptor linked signal transduction	signal transduction	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	positive regulation of cell growth	other biological processes	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c1943	platelet activation	stress response	P	Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]
ruditapes2_c635	actin cytoskeleton organization	cell organization and biogenesis	P	Profilin
ruditapes_c28533	cytoskeleton organization	cell organization and biogenesis	P	Profilin
ruditapes_c28533	actin cytoskeleton organization	cell organization and biogenesis	P	Profilin
ruditapes2_c635	cytoskeleton organization	cell organization and biogenesis	P	Profilin
ruditapes_c22704	electron transport chain	other metabolic processes	P	Ferredoxin-1 (Fd-1)
ruditapes_c22704	transport	transport	P	Ferredoxin-1 (Fd-1)
ruditapes_s37188	RNA biosynthetic process	RNA metabolism	P	Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase) [Cleaved into: Replicase small subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 3.6.4.13) (126 kDa protein) (Methyltransferase/RNA helicase) (MT/HEL)]
ruditapes_s37188	mRNA methylation	RNA metabolism	P	Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase) [Cleaved into: Replicase small subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 3.6.4.13) (126 kDa protein) (Methyltransferase/RNA helicase) (MT/HEL)]
ruditapes_s37188	viral genome replication	other biological processes	P	Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase) [Cleaved into: Replicase small subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 3.6.4.13) (126 kDa protein) (Methyltransferase/RNA helicase) (MT/HEL)]
ruditapes_s37188	"transcription, DNA-dependent"	RNA metabolism	P	Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase) [Cleaved into: Replicase small subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 3.6.4.13) (126 kDa protein) (Methyltransferase/RNA helicase) (MT/HEL)]
ruditapes_s37188	RNA processing	RNA metabolism	P	Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase) [Cleaved into: Replicase small subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 3.6.4.13) (126 kDa protein) (Methyltransferase/RNA helicase) (MT/HEL)]
ruditapes_c11963	DNA integration	DNA metabolism	P	Transposase for transposon Tn552 (ORF 480)
ruditapes_c11963	transposition	other biological processes	P	Transposase for transposon Tn552 (ORF 480)
ruditapes_c11963	DNA recombination	DNA metabolism	P	Transposase for transposon Tn552 (ORF 480)
ruditapes_c6225	alkaloid metabolic process	other metabolic processes	P	Strictosidine synthase (EC 4.3.3.2)
ruditapes_c6225	biosynthetic process	other metabolic processes	P	Strictosidine synthase (EC 4.3.3.2)
ruditapes_c23043	intracellular protein transport	transport	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c23043	vesicle-mediated transport	transport	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c23043	transport	transport	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c23043	endocytosis	transport	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c23043	endocytosis	cell organization and biogenesis	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c23043	protein transport	transport	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_lrc9546	wing disc anterior/posterior pattern formation	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	"anterior/posterior lineage restriction, imaginal disc"	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	eye-antennal disc morphogenesis	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	germ-line stem cell division	other biological processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	negative regulation of smoothened signaling pathway	signal transduction	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	regulation of mitotic cell cycle	cell cycle and proliferation	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	gonad development	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	ovarian follicle cell development	other biological processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	regulation of protein import into nucleus	transport	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	lipid homeostasis	other biological processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	somatic stem cell division	other biological processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	anterior/posterior pattern formation	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	smoothened signaling pathway	signal transduction	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	imaginal disc-derived wing morphogenesis	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	Bolwig's organ morphogenesis	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	proteolysis	protein metabolism	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	segment polarity determination	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	embryonic pattern specification	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	oogenesis	other biological processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	multicellular organismal development	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	axon guidance	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	axon guidance	cell organization and biogenesis	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	dephosphorylation	other metabolic processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	determination of genital disc primordium	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_lrc9546	peripheral nervous system development	developmental processes	P	Protein patched (Hedgehog receptor)
ruditapes_c18635	viral genome replication	other biological processes	P	Non-capsid protein NS-1 (Non-structural protein NS1)
ruditapes_c18635	DNA replication	DNA metabolism	P	Non-capsid protein NS-1 (Non-structural protein NS1)
ruditapes_c21353	neutrophil chemotaxis	other biological processes	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_c21353	positive regulation of neuron apoptosis	death	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_lrc35799	cellular extravasation	other biological processes	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_c21353	vasodilation	other biological processes	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_c21353	cellular extravasation	other biological processes	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_lrc35799	cell chemotaxis	other biological processes	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_c21353	cell chemotaxis	other biological processes	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_lrc35799	neutrophil chemotaxis	other biological processes	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_lrc35799	integrin-mediated signaling pathway	signal transduction	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_c21353	activation of MAPK activity	signal transduction	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_c21353	activation of MAPK activity	protein metabolism	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_lrc35799	cell adhesion	cell adhesion	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_lrc35799	activation of MAPK activity	signal transduction	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_lrc35799	activation of MAPK activity	protein metabolism	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_c21353	integrin-mediated signaling pathway	signal transduction	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_lrc35799	vasodilation	other biological processes	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_c21353	cell adhesion	cell adhesion	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_c21353	neuron projection morphogenesis	developmental processes	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_c21353	neuron projection morphogenesis	cell organization and biogenesis	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_lrc35799	positive regulation of neuron apoptosis	death	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_lrc35799	neuron projection morphogenesis	developmental processes	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_lrc35799	neuron projection morphogenesis	cell organization and biogenesis	P	Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a)
ruditapes_s37802	translational elongation	protein metabolism	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	translational termination	protein metabolism	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	translational termination	cell organization and biogenesis	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	viral reproduction	other biological processes	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	viral transcription	RNA metabolism	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	translational initiation	protein metabolism	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	viral infectious cycle	other biological processes	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	translation	protein metabolism	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_s37802	gene expression	other metabolic processes	P	60S ribosomal protein L17 (60S ribosomal protein L23) (PD-1)
ruditapes_c25770	translation	protein metabolism	P	"Putative 50S ribosomal protein L23, chloroplastic"
ruditapes_c1686	translation	protein metabolism	P	"39S ribosomal protein L3, mitochondrial (L3mt) (MRP-L3)"
ruditapes_c5559	translation	protein metabolism	P	"39S ribosomal protein L3, mitochondrial (L3mt) (MRP-L3)"
ruditapes2_lrc4701	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc4701	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc4701	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc22915	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3379	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c6217	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc4701	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c1581	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc25392	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3379	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc22915	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc22915	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c1581	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c1581	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc25392	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc25392	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc16569	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc16569	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc16569	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc16569	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc25392	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc22915	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c6217	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c6217	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c6217	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3379	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3379	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c1581	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c5084	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3105	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc31148	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc31148	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c5084	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc31148	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c5084	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_s37764	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_s37764	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c37744	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3255	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3255	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_s37764	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc33589	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c37744	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c2743	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3105	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3105	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3255	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c37744	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_c4329	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_s37764	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c2743	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3105	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c5084	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c2743	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc31148	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_lrc3255	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c2743	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_c4329	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_c4329	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes2_c4329	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc33589	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc33589	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c37744	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_lrc33589	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin) (Fragment)
ruditapes_c23562	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Gastrula zinc finger protein XlCGF28.1 (Fragment)
ruditapes_c23562	"transcription, DNA-dependent"	RNA metabolism	P	Gastrula zinc finger protein XlCGF28.1 (Fragment)
ruditapes_c6646	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Oocyte zinc finger protein XlCOF19 (Fragment)
ruditapes_c6646	"transcription, DNA-dependent"	RNA metabolism	P	Oocyte zinc finger protein XlCOF19 (Fragment)
ruditapes_c18747	"transcription, DNA-dependent"	RNA metabolism	P	Oocyte zinc finger protein XlCOF20 (Fragment)
ruditapes_c18747	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Oocyte zinc finger protein XlCOF20 (Fragment)
ruditapes_c4845	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-4 (T beta 4) (Thymosin beta 4Xen)
ruditapes_c1997	sequestering of actin monomers	protein metabolism	P	Thymosin beta-4 (T beta 4) (Thymosin beta 4Xen)
ruditapes_c1997	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-4 (T beta 4) (Thymosin beta 4Xen)
ruditapes_c1997	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-4 (T beta 4) (Thymosin beta 4Xen)
ruditapes_c1997	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-4 (T beta 4) (Thymosin beta 4Xen)
ruditapes_c4845	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-4 (T beta 4) (Thymosin beta 4Xen)
ruditapes_c4845	sequestering of actin monomers	protein metabolism	P	Thymosin beta-4 (T beta 4) (Thymosin beta 4Xen)
ruditapes_c4845	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-4 (T beta 4) (Thymosin beta 4Xen)
ruditapes_lrc38501	establishment of cell polarity	cell organization and biogenesis	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_lrc38501	neural fold formation	developmental processes	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_lrc38501	positive regulation of actin filament depolymerization	protein metabolism	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_lrc38501	positive regulation of actin filament depolymerization	cell organization and biogenesis	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_lrc38501	cell motion	other biological processes	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_lrc38501	protein amino acid phosphorylation	protein metabolism	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_lrc38501	cytokinesis	other biological processes	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_lrc38501	cytoskeleton organization	cell organization and biogenesis	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_lrc38501	response to amino acid stimulus	other biological processes	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_lrc38501	actin filament organization	cell organization and biogenesis	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_lrc38501	regulation of cell morphogenesis	cell organization and biogenesis	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_lrc38501	neural crest cell migration	developmental processes	P	"Cofilin-1 (Cofilin, non-muscle isoform)"
ruditapes_c11714	cell surface receptor linked signal transduction	signal transduction	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c24567	cell surface receptor linked signal transduction	signal transduction	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c11714	protein amino acid phosphorylation	protein metabolism	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c24567	receptor guanylyl cyclase signaling pathway	signal transduction	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c24567	protein amino acid phosphorylation	protein metabolism	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c24567	negative regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c11714	dopamine metabolic process	other metabolic processes	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c11714	receptor guanylyl cyclase signaling pathway	signal transduction	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c24567	cyclic nucleotide biosynthetic process	other metabolic processes	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c11714	positive regulation of cGMP biosynthetic process	other metabolic processes	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c11714	regulation of blood vessel size	other biological processes	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c24567	dopamine metabolic process	other metabolic processes	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c11714	cGMP biosynthetic process	other metabolic processes	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c11714	cyclic nucleotide biosynthetic process	other metabolic processes	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c24567	cGMP biosynthetic process	other metabolic processes	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c11714	negative regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c24567	regulation of blood vessel size	other biological processes	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c24567	positive regulation of cGMP biosynthetic process	other metabolic processes	P	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)
ruditapes_c5492	signal transduction	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes_c13575	positive regulation of Ras GTPase activity	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes_c5492	regulation of small GTPase mediated signal transduction	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes_c22995	regulation of adenylate cyclase activity	other metabolic processes	P	Inhibitory regulator protein IRA1
ruditapes_c5492	positive regulation of Ras GTPase activity	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes_c5492	negative regulation of Ras protein signal transduction	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes_c13575	negative regulation of Ras protein signal transduction	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes_c22995	positive regulation of Ras GTPase activity	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes_c13575	regulation of adenylate cyclase activity	other metabolic processes	P	Inhibitory regulator protein IRA1
ruditapes_c22995	negative regulation of cAMP biosynthetic process	other metabolic processes	P	Inhibitory regulator protein IRA1
ruditapes_c13575	regulation of small GTPase mediated signal transduction	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes_c13575	negative regulation of cAMP biosynthetic process	other metabolic processes	P	Inhibitory regulator protein IRA1
ruditapes_c5492	regulation of adenylate cyclase activity	other metabolic processes	P	Inhibitory regulator protein IRA1
ruditapes_c5492	negative regulation of cAMP biosynthetic process	other metabolic processes	P	Inhibitory regulator protein IRA1
ruditapes_c5492	positive regulation of GTPase activity	other biological processes	P	Inhibitory regulator protein IRA1
ruditapes_c22995	regulation of small GTPase mediated signal transduction	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes_c13575	signal transduction	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes_c13575	positive regulation of GTPase activity	other biological processes	P	Inhibitory regulator protein IRA1
ruditapes_c22995	negative regulation of Ras protein signal transduction	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes_c22995	positive regulation of GTPase activity	other biological processes	P	Inhibitory regulator protein IRA1
ruditapes_c22995	signal transduction	signal transduction	P	Inhibitory regulator protein IRA1
ruditapes2_c2131	response to drug	other biological processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	central nervous system development	developmental processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	heart development	developmental processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	response to estradiol stimulus	other biological processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	peptide metabolic process	other metabolic processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	protein modification process	protein metabolism	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	response to hypoxia	stress response	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	peptide metabolic process	other metabolic processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	response to hypoxia	stress response	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	response to copper ion	other biological processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	protein modification process	protein metabolism	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	limb development	developmental processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	central nervous system development	developmental processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	metabolic process	other metabolic processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	response to glucocorticoid stimulus	other biological processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	response to copper ion	other biological processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	response to pH	other biological processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	response to estradiol stimulus	other biological processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	response to pH	other biological processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	limb development	developmental processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	response to glucocorticoid stimulus	other biological processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	metabolic process	other metabolic processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	response to drug	other biological processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	oxidation reduction	other metabolic processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes2_c2131	heart development	developmental processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c26677	oxidation reduction	other metabolic processes	P	Peptidyl-glycine alpha-amidating monooxygenase (PAM) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase (PHM) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (EC 4.3.2.5) (Peptidylamidoglycolate lyase) (PAL)]
ruditapes_c16093	protein amino acid glycosylation	protein metabolism	P	Tetraspanin-8 (Tspan-8) (Transmembrane 4 superfamily member 3) (Tumor-associated antigen CO-029)
ruditapes_c16093	signal transduction	signal transduction	P	Tetraspanin-8 (Tspan-8) (Transmembrane 4 superfamily member 3) (Tumor-associated antigen CO-029)
ruditapes_c16093	negative regulation of blood coagulation	stress response	P	Tetraspanin-8 (Tspan-8) (Transmembrane 4 superfamily member 3) (Tumor-associated antigen CO-029)
ruditapes2_c2700	lipid biosynthetic process	other metabolic processes	P	Fatty acid synthase (EC 2.3.1.85) [Includes: [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100); 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.10); Oleoyl-[acyl-carrier-protein] hydrolase (EC 3.1.2.14)]
ruditapes2_c2700	biosynthetic process	other metabolic processes	P	Fatty acid synthase (EC 2.3.1.85) [Includes: [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100); 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.10); Oleoyl-[acyl-carrier-protein] hydrolase (EC 3.1.2.14)]
ruditapes2_c2700	metabolic process	other metabolic processes	P	Fatty acid synthase (EC 2.3.1.85) [Includes: [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100); 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.10); Oleoyl-[acyl-carrier-protein] hydrolase (EC 3.1.2.14)]
ruditapes2_c2700	oxidation reduction	other metabolic processes	P	Fatty acid synthase (EC 2.3.1.85) [Includes: [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100); 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.10); Oleoyl-[acyl-carrier-protein] hydrolase (EC 3.1.2.14)]
ruditapes2_c2700	fatty acid biosynthetic process	other metabolic processes	P	Fatty acid synthase (EC 2.3.1.85) [Includes: [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100); 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.10); Oleoyl-[acyl-carrier-protein] hydrolase (EC 3.1.2.14)]
ruditapes_c18210	iron ion transport	transport	P	Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1)
ruditapes_c18210	cellular iron ion homeostasis	other biological processes	P	Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1)
ruditapes_c18210	oxidation reduction	other metabolic processes	P	Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1)
ruditapes_c15222	regulation of embryonic development	developmental processes	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	branching involved in salivary gland morphogenesis	developmental processes	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	neuron projection development	developmental processes	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	neuron projection development	cell organization and biogenesis	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	establishment of epithelial cell apical/basal polarity	developmental processes	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	establishment of epithelial cell apical/basal polarity	cell organization and biogenesis	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	morphogenesis of an epithelial sheet	developmental processes	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	cell surface receptor linked signal transduction	signal transduction	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	regulation of cell migration	other biological processes	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	tissue development	developmental processes	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	branching involved in lung morphogenesis	developmental processes	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	regulation of cell adhesion	cell adhesion	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	retina development in camera-type eye	developmental processes	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes_c15222	cell adhesion	cell adhesion	P	Laminin subunit alpha-1 (Laminin A chain) (Laminin-1 subunit alpha) (Laminin-3 subunit alpha) (S-laminin subunit alpha) (S-LAM alpha)
ruditapes2_c765	response to estradiol stimulus	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of interleukin-1 beta production	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	organ regeneration	developmental processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	response to reactive oxygen species	stress response	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	metabolic process	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of acute inflammatory response	stress response	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of acute inflammatory response	stress response	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	xenobiotic metabolic process	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	oligodendrocyte development	developmental processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	response to nutrient levels	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	regulation of stress-activated MAPK cascade	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	regulation of stress-activated MAPK cascade	stress response	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	regulation of ERK1 and ERK2 cascade	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	oligodendrocyte development	developmental processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of JUN kinase activity	protein metabolism	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	cellular response to insulin stimulus	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of leukocyte proliferation	cell cycle and proliferation	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	response to amino acid stimulus	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	xenobiotic metabolic process	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of tumor necrosis factor production	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of stress-activated MAPK cascade	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of stress-activated MAPK cascade	stress response	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of JUN kinase activity	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of JUN kinase activity	stress response	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of MAP kinase activity	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	response to ethanol	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	response to L-ascorbic acid	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	response to nutrient levels	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	response to estradiol stimulus	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	response to toxin	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of interleukin-1 beta production	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of MAP kinase activity	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	response to reactive oxygen species	stress response	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	cellular response to insulin stimulus	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of nitric-oxide synthase biosynthetic process	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of tumor necrosis factor production	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	anti-apoptosis	death	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	regulation of stress-activated MAPK cascade	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	regulation of stress-activated MAPK cascade	stress response	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of JUN kinase activity	protein metabolism	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of stress-activated MAPK cascade	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of stress-activated MAPK cascade	stress response	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of necrotic cell death	death	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of apoptosis	death	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of apoptosis	death	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	regulation of ERK1 and ERK2 cascade	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of biosynthetic process	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of nitric-oxide synthase biosynthetic process	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of JUN kinase activity	signal transduction	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of JUN kinase activity	stress response	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	response to toxin	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	negative regulation of leukocyte proliferation	cell cycle and proliferation	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	organ regeneration	developmental processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	positive regulation of superoxide release	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of necrotic cell death	death	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	negative regulation of biosynthetic process	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	response to amino acid stimulus	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_lrc33478	response to L-ascorbic acid	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	response to ethanol	other biological processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	anti-apoptosis	death	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	positive regulation of superoxide release	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes2_c765	metabolic process	other metabolic processes	P	Glutathione S-transferase P 1 (Gst P1) (EC 2.5.1.18) (GST YF-YF) (GST class-pi) (GST-piB) (Preadipocyte growth factor)
ruditapes_c26139	negative regulation of cAMP biosynthetic process	other metabolic processes	P	Inhibitory regulator protein IRA2
ruditapes_c26139	regulation of small GTPase mediated signal transduction	signal transduction	P	Inhibitory regulator protein IRA2
ruditapes_c26139	positive regulation of Ras GTPase activity	signal transduction	P	Inhibitory regulator protein IRA2
ruditapes_c26139	response to stress	stress response	P	Inhibitory regulator protein IRA2
ruditapes_c26139	negative regulation of Ras protein signal transduction	signal transduction	P	Inhibitory regulator protein IRA2
ruditapes_c26139	positive regulation of GTPase activity	other biological processes	P	Inhibitory regulator protein IRA2
ruditapes_c26139	signal transduction	signal transduction	P	Inhibitory regulator protein IRA2
ruditapes_lrc29500	carbohydrate metabolic process	other metabolic processes	P	Acidic endochitinase (EC 3.2.1.14)
ruditapes_lrc29500	chitin catabolic process	other metabolic processes	P	Acidic endochitinase (EC 3.2.1.14)
ruditapes_lrc29500	polysaccharide catabolic process	other metabolic processes	P	Acidic endochitinase (EC 3.2.1.14)
ruditapes_lrc29500	response to salt stress	stress response	P	Acidic endochitinase (EC 3.2.1.14)
ruditapes_lrc29500	response to cold	stress response	P	Acidic endochitinase (EC 3.2.1.14)
ruditapes_lrc29500	response to wounding	stress response	P	Acidic endochitinase (EC 3.2.1.14)
ruditapes_lrc29500	response to light intensity	other biological processes	P	Acidic endochitinase (EC 3.2.1.14)
ruditapes_lrc29500	cellular response to water deprivation	stress response	P	Acidic endochitinase (EC 3.2.1.14)
ruditapes_lrc29500	metabolic process	other metabolic processes	P	Acidic endochitinase (EC 3.2.1.14)
ruditapes_c1797	nucleosome assembly	cell organization and biogenesis	P	Histone H2A
ruditapes_lrc32115	nucleosome assembly	cell organization and biogenesis	P	Histone H2A
ruditapes2_c2593	nucleosome assembly	cell organization and biogenesis	P	Histone H2A
ruditapes2_c1410	nucleosome assembly	cell organization and biogenesis	P	Histone H2A
ruditapes_lrc36668	nucleosome assembly	cell organization and biogenesis	P	Histone H2A
ruditapes_c28158	"spread of virus within host, cell to cell"	other biological processes	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c13248	proteolysis	protein metabolism	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c1674	"spread of virus within host, cell to cell"	other biological processes	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c13248	"spread of virus within host, cell to cell"	other biological processes	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c28158	proteolysis	protein metabolism	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c1674	proteolysis	protein metabolism	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c1674	RNA-dependent DNA replication	DNA metabolism	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c28158	RNA-dependent DNA replication	DNA metabolism	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c13248	RNA-dependent DNA replication	DNA metabolism	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c1674	transport	transport	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c28158	transport	transport	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c13248	transport	transport	P	Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c15461	microtubule cytoskeleton organization	cell organization and biogenesis	P	Neurofilament heavy polypeptide (NF-H) (200 kDa neurofilament protein) (Neurofilament triplet H protein)
ruditapes_c15461	intermediate filament cytoskeleton organization	cell organization and biogenesis	P	Neurofilament heavy polypeptide (NF-H) (200 kDa neurofilament protein) (Neurofilament triplet H protein)
ruditapes_lrc10445	cellular amino acid biosynthetic process	other metabolic processes	P	"Asparagine synthetase, nodule [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase)"
ruditapes_lrc10445	asparagine biosynthetic process	other metabolic processes	P	"Asparagine synthetase, nodule [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase)"
ruditapes_lrc10445	glutamine metabolic process	other metabolic processes	P	"Asparagine synthetase, nodule [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase)"
ruditapes_c7137	signal transduction	signal transduction	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes_c7137	G-protein coupled receptor protein signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes_c7137	regulation of feeding behavior	other biological processes	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes_c7137	inhibition of adenylate cyclase activity by serotonin receptor signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes_c7137	inhibition of adenylate cyclase activity by serotonin receptor signaling pathway	other metabolic processes	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes_c7137	serotonin receptor signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes2_c3122	cell-cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	atrial septum morphogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of phospholipase activity	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of BMP signaling pathway	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of cell differentiation	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	extracellular matrix organization	cell organization and biogenesis	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	extracellular matrix organization	cell organization and biogenesis	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of cell migration	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	cell-cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of BMP signaling pathway	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of phospholipase activity	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of protein kinase activity	other metabolic processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	regulation of ERK1 and ERK2 cascade	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	chondroblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of osteoblast proliferation	cell cycle and proliferation	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of cell differentiation	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	regulation of cell growth	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	chondroblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of osteoblast proliferation	cell cycle and proliferation	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	cell-cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	negative regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	negative regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of cell-substrate adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of cell migration	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of caspase activity	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of BMP signaling pathway	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	atrial septum morphogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	extracellular matrix organization	cell organization and biogenesis	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	negative regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	negative regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	chorio-allantoic fusion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	atrial septum morphogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of cell-substrate adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	chondroblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	labyrinthine layer blood vessel development	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	labyrinthine layer blood vessel development	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of osteoblast proliferation	cell cycle and proliferation	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	chorio-allantoic fusion	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	regulation of ERK1 and ERK2 cascade	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	regulation of cell growth	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	labyrinthine layer blood vessel development	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	intussusceptive angiogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	labyrinthine layer blood vessel development	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	labyrinthine layer blood vessel development	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of osteoblast proliferation	cell cycle and proliferation	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of caspase activity	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of cell migration	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	cell-cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of caspase activity	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of BMP signaling pathway	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	regulation of cell growth	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	atrial septum morphogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	intussusceptive angiogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of cell differentiation	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of phospholipase activity	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of cell differentiation	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	regulation of ERK1 and ERK2 cascade	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of protein kinase activity	other metabolic processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	cell-cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	chorio-allantoic fusion	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	chorio-allantoic fusion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of cell migration	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of cell differentiation	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	chondroblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	negative regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of cell-substrate adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	intussusceptive angiogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of cell-substrate adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of cell migration	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of phospholipase activity	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	labyrinthine layer blood vessel development	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	atrial septum morphogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	extracellular matrix organization	cell organization and biogenesis	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of cell migration	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	chondroblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	regulation of cell growth	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	regulation of ERK1 and ERK2 cascade	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of phospholipase activity	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	chondroblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	atrial septum morphogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	intussusceptive angiogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of phospholipase activity	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of osteoblast proliferation	cell cycle and proliferation	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of caspase activity	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of BMP signaling pathway	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of caspase activity	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of protein kinase activity	other metabolic processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	regulation of cell growth	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	atrial septum morphogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of cell-substrate adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of cell differentiation	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of cell migration	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	intussusceptive angiogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	chondroblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	chorio-allantoic fusion	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	chorio-allantoic fusion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	extracellular matrix organization	cell organization and biogenesis	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of cell differentiation	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	regulation of cell growth	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of cell-substrate adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	intussusceptive angiogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	negative regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	chorio-allantoic fusion	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	chorio-allantoic fusion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of protein kinase activity	other metabolic processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	positive regulation of protein kinase activity	other metabolic processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	chorio-allantoic fusion	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	chorio-allantoic fusion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of osteoblast proliferation	cell cycle and proliferation	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	regulation of ERK1 and ERK2 cascade	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of osteoblast proliferation	cell cycle and proliferation	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	cell-cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of protein kinase activity	other metabolic processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of BMP signaling pathway	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	extracellular matrix organization	cell organization and biogenesis	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	regulation of ERK1 and ERK2 cascade	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of phospholipase activity	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	cell-cell adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of caspase activity	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	regulation of cell growth	other biological processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	chorio-allantoic fusion	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	chorio-allantoic fusion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c36557	intussusceptive angiogenesis	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	regulation of ERK1 and ERK2 cascade	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	negative regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	chorio-allantoic fusion	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	chorio-allantoic fusion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3122	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	positive regulation of cell-substrate adhesion	cell adhesion	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c3393	positive regulation of protein kinase activity	other metabolic processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of apoptosis	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c37487	labyrinthine layer blood vessel development	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c5475	positive regulation of osteoblast differentiation	developmental processes	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of caspase activity	death	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	extracellular matrix organization	cell organization and biogenesis	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes2_c138	positive regulation of BMP signaling pathway	signal transduction	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c4086	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Protein CYR61 (CCN family member 1) (Protein CEF-10)
ruditapes_c27026	ionotropic glutamate receptor signaling pathway	signal transduction	P	Probable glutamate receptor (Kainate-binding protein)
ruditapes_c27026	transport	transport	P	Probable glutamate receptor (Kainate-binding protein)
ruditapes_c27026	ion transport	transport	P	Probable glutamate receptor (Kainate-binding protein)
ruditapes_lrc32792	acute-phase response	stress response	P	Serum amyloid A-3 protein
ruditapes_c5883	cell redox homeostasis	other biological processes	P	Alkyl hydroperoxide reductase subunit F (EC 1.8.1.-) (Alkyl hydroperoxide reductase F52A protein)
ruditapes_c5883	oxidation reduction	other metabolic processes	P	Alkyl hydroperoxide reductase subunit F (EC 1.8.1.-) (Alkyl hydroperoxide reductase F52A protein)
ruditapes_lrc20984	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc20984	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc20984	transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc20984	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc20984	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc20984	proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_lrc20984	ion transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b)"
ruditapes_c17463	transport	transport	P	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
ruditapes_c17463	oxidation reduction	other metabolic processes	P	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
ruditapes_c17463	electron transport chain	other metabolic processes	P	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
ruditapes_c17463	metabolic process	other metabolic processes	P	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
ruditapes_c17463	nitrogen fixation	other metabolic processes	P	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
ruditapes_c13874	metabolic process	other metabolic processes	P	UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase)
ruditapes_c28639	glycolysis	other metabolic processes	P	Pyruvate kinase (PK) (EC 2.7.1.40) (Fragment)
ruditapes_c28639	phosphorylation	other metabolic processes	P	Pyruvate kinase (PK) (EC 2.7.1.40) (Fragment)
ruditapes2_lrc5266	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc5266	transport	transport	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc5266	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc5266	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc5266	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc5266	ion transport	transport	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc5266	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc5266	viral protein processing	protein metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc5266	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc5266	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c16629	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc3591	viral protein processing	protein metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc3591	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc3591	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc3591	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc3591	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c16629	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc3591	ion transport	transport	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc3591	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c16629	viral protein processing	protein metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c16629	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c16629	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c16629	ion transport	transport	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc3591	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c16629	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c16629	transport	transport	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc3591	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_lrc3591	transport	transport	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c16629	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c16629	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_c4850	response to nutrient	other biological processes	P	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Cytochrome c oxidase polypeptide IV) (Cytochrome c oxidase subunit IV isoform 1) (COX IV-1)"
ruditapes_c30523	metabolic process	other metabolic processes	P	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase (EC 6.3.2.26) (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase) (ACV synthetase) (ACVS)
ruditapes_c30523	biosynthetic process	other metabolic processes	P	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase (EC 6.3.2.26) (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase) (ACV synthetase) (ACVS)
ruditapes_c30523	antibiotic biosynthetic process	other metabolic processes	P	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase (EC 6.3.2.26) (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase) (ACV synthetase) (ACVS)
ruditapes_c16112	regulation of lipid transport	transport	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	cholesterol efflux	transport	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	negative regulation of phosphatidylcholine catabolic process	other metabolic processes	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	phospholipid efflux	transport	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	lipoprotein metabolic process	other metabolic processes	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	triglyceride metabolic process	other metabolic processes	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	negative regulation of receptor-mediated endocytosis	transport	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	negative regulation of receptor-mediated endocytosis	cell organization and biogenesis	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	negative regulation of cholesterol transport	transport	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	cholesterol metabolic process	other metabolic processes	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	negative regulation of lipoprotein lipase activity	other biological processes	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	very-low-density lipoprotein particle clearance	cell organization and biogenesis	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	negative regulation of lipid metabolic process	other metabolic processes	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	chylomicron remnant clearance	cell organization and biogenesis	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	negative regulation of very-low-density lipoprotein particle clearance	cell organization and biogenesis	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	transport	transport	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	lipid transport	transport	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	plasma lipoprotein particle remodeling	cell organization and biogenesis	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	negative regulation of fatty acid biosynthetic process	other metabolic processes	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c16112	negative regulation of lipid catabolic process	other metabolic processes	P	Apolipoprotein C-I (Apo-CIB) (ApoC-IB) (Apolipoprotein C1) (Liver regeneration-related protein LRRG04) [Cleaved into: Truncated apolipoprotein C-I (Apo-CIB') (ApoC-IB')]
ruditapes_c976	carbohydrate metabolic process	other metabolic processes	P	SITS-binding protein (SP105)
ruditapes_s36458	cellular iron ion homeostasis	other biological processes	P	"Ferritin-1, chloroplastic (EC 1.16.3.1) (SFerH-1) (SOF-35)"
ruditapes_s36458	oxidation reduction	other metabolic processes	P	"Ferritin-1, chloroplastic (EC 1.16.3.1) (SFerH-1) (SOF-35)"
ruditapes_s36458	iron ion transport	transport	P	"Ferritin-1, chloroplastic (EC 1.16.3.1) (SFerH-1) (SOF-35)"
ruditapes_c13788	glutamine metabolic process	other metabolic processes	P	Protein PYR1-3 [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c13788	glutamine catabolic process	other metabolic processes	P	Protein PYR1-3 [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c13788	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Protein PYR1-3 [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c13788	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Protein PYR1-3 [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c13788	cellular amino acid metabolic process	other metabolic processes	P	Protein PYR1-3 [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c13788	carbamoyl phosphate biosynthetic process	other metabolic processes	P	Protein PYR1-3 [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c13788	nitrogen compound metabolic process	other metabolic processes	P	Protein PYR1-3 [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c13788	metabolic process	other metabolic processes	P	Protein PYR1-3 [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c15964	proteolysis	protein metabolism	P	Mitochondrial-processing peptidase subunit alpha (EC 3.4.24.64) (Alpha-MPP) (P-55)
ruditapes_c17783	response to salt stress	stress response	P	Annexin A7 (Annexin VII) (Annexin-7) (Synexin)
ruditapes_c17783	cell proliferation	cell cycle and proliferation	P	Annexin A7 (Annexin VII) (Annexin-7) (Synexin)
ruditapes_c17783	cellular water homeostasis	other biological processes	P	Annexin A7 (Annexin VII) (Annexin-7) (Synexin)
ruditapes_c17783	hemostasis	other biological processes	P	Annexin A7 (Annexin VII) (Annexin-7) (Synexin)
ruditapes_c17783	regulation of cell shape	cell organization and biogenesis	P	Annexin A7 (Annexin VII) (Annexin-7) (Synexin)
ruditapes_c17783	social behavior	other biological processes	P	Annexin A7 (Annexin VII) (Annexin-7) (Synexin)
ruditapes_c17783	cellular calcium ion homeostasis	other biological processes	P	Annexin A7 (Annexin VII) (Annexin-7) (Synexin)
ruditapes_c5621	metabolic process	other metabolic processes	P	Glutathione S-transferase 2 (EC 2.5.1.18) (GST class-mu) (GST-CL2) (GSTM1-1)
ruditapes_c28474	transport	transport	P	Probable non-specific lipid-transfer protein (LTP) (Aleurone-specific 10 kDa protein) (B-FABP)
ruditapes_c28474	lipid transport	transport	P	Probable non-specific lipid-transfer protein (LTP) (Aleurone-specific 10 kDa protein) (B-FABP)
ruditapes_c23242	ATP catabolic process	other metabolic processes	P	Lipopolysaccharide export system ATP-binding protein LptB (EC 3.6.3.-) (Fragment)
ruditapes_c23242	transport	transport	P	Lipopolysaccharide export system ATP-binding protein LptB (EC 3.6.3.-) (Fragment)
ruditapes_c9221	two-component signal transduction system (phosphorelay)	signal transduction	P	Drug sensory protein A (EC 2.7.13.3)
ruditapes_c9221	response to herbicide	stress response	P	Drug sensory protein A (EC 2.7.13.3)
ruditapes_c9221	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Drug sensory protein A (EC 2.7.13.3)
ruditapes_c9221	signal transduction	signal transduction	P	Drug sensory protein A (EC 2.7.13.3)
ruditapes_c9221	phosphorylation	other metabolic processes	P	Drug sensory protein A (EC 2.7.13.3)
ruditapes_c9221	peptidyl-histidine phosphorylation	protein metabolism	P	Drug sensory protein A (EC 2.7.13.3)
ruditapes_c7171	"dosage compensation, by inactivation of X chromosome"	other metabolic processes	P	Protein suppressor of variegation 3-7
ruditapes_c30781	carboxylic acid metabolic process	other metabolic processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	gamma-aminobutyric acid biosynthetic process	other metabolic processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	larval locomotory behavior	other biological processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	response to mechanical stimulus	other biological processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	neurotransmitter biosynthetic process	cell-cell signaling	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	neurotransmitter receptor metabolic process	other metabolic processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	neurotransmitter receptor metabolic process	cell-cell signaling	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	synaptogenesis	developmental processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	synaptogenesis	cell organization and biogenesis	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	neurotransmitter biosynthetic process	other metabolic processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	neuromuscular junction development	developmental processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	neuromuscular junction development	cell organization and biogenesis	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c30781	glutamate catabolic process	other metabolic processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c20279	axon extension	developmental processes	P	Neuroglian
ruditapes_c20279	axon extension	cell organization and biogenesis	P	Neuroglian
ruditapes_c20279	mushroom body development	developmental processes	P	Neuroglian
ruditapes_c20279	nerve maturation	developmental processes	P	Neuroglian
ruditapes_c20279	imaginal disc morphogenesis	developmental processes	P	Neuroglian
ruditapes_c20279	cell adhesion	cell adhesion	P	Neuroglian
ruditapes_c20279	dendrite morphogenesis	cell organization and biogenesis	P	Neuroglian
ruditapes_c20279	axon ensheathment	developmental processes	P	Neuroglian
ruditapes_c20279	epidermal growth factor receptor signaling pathway	signal transduction	P	Neuroglian
ruditapes_c20279	synapse organization	cell organization and biogenesis	P	Neuroglian
ruditapes_c20279	neuron adhesion	cell adhesion	P	Neuroglian
ruditapes_c20279	septate junction assembly	cell organization and biogenesis	P	Neuroglian
ruditapes_c20279	dendrite morphogenesis	developmental processes	P	Neuroglian
ruditapes_c20279	"regulation of tube size, open tracheal system"	developmental processes	P	Neuroglian
ruditapes_c20279	axonogenesis	developmental processes	P	Neuroglian
ruditapes_c20279	axonogenesis	cell organization and biogenesis	P	Neuroglian
ruditapes_c20279	multicellular organismal development	developmental processes	P	Neuroglian
ruditapes_c20279	melanotic encapsulation of foreign target	stress response	P	Neuroglian
ruditapes_c20279	melanotic encapsulation of foreign target	other metabolic processes	P	Neuroglian
ruditapes_lrc26990	translation	protein metabolism	P	40S ribosomal protein S15 (RIG protein)
ruditapes_c17045	oxidation reduction	other metabolic processes	P	"Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) (3,4-PCD)"
ruditapes_c17045	aromatic compound catabolic process	other metabolic processes	P	"Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) (3,4-PCD)"
ruditapes_c17045	cellular aromatic compound metabolic process	other metabolic processes	P	"Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) (3,4-PCD)"
ruditapes_c21620	protocatechuate catabolic process	other metabolic processes	P	"Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) (3,4-PCD)"
ruditapes_c21620	oxidation reduction	other metabolic processes	P	"Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) (3,4-PCD)"
ruditapes_c21620	cellular aromatic compound metabolic process	other metabolic processes	P	"Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) (3,4-PCD)"
ruditapes_c21620	aromatic compound catabolic process	other metabolic processes	P	"Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) (3,4-PCD)"
ruditapes_c8901	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c8901	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c8901	transport	transport	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c8901	respiratory electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c23947	cytolysis	death	P	Phospholipase C (PLC) (EC 3.1.4.3) (Cbp) (Phosphatidylcholine cholinephosphohydrolase)
ruditapes_c8255	glycolysis	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c8255	glucose metabolic process	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c8255	oxidation reduction	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c8255	response to stress	stress response	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c15284	ribosome biogenesis	other biological processes	P	ATP-dependent RNA helicase HCA4 (EC 3.6.4.13) (DEAD box protein 4) (Helicase CA4) (Helicase UF1)
ruditapes_c15284	rRNA processing	RNA metabolism	P	ATP-dependent RNA helicase HCA4 (EC 3.6.4.13) (DEAD box protein 4) (Helicase CA4) (Helicase UF1)
ruditapes_c13426	translation	protein metabolism	P	Eukaryotic translation initiation factor 2 subunit alpha (eIF-2-alpha)
ruditapes_c13426	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 2 subunit alpha (eIF-2-alpha)
ruditapes_c6169	photosynthesis	other metabolic processes	P	Uncharacterized protein in pufB 5'region (Fragment)
ruditapes_c6169	oxidation reduction	other metabolic processes	P	Uncharacterized protein in pufB 5'region (Fragment)
ruditapes_c6169	chlorophyll biosynthetic process	other metabolic processes	P	Uncharacterized protein in pufB 5'region (Fragment)
ruditapes_c31409	neurotransmitter receptor metabolic process	other metabolic processes	P	Glutamine synthetase 2 cytoplasmic (EC 6.3.1.2) (Glutamate--ammonia ligase 2)
ruditapes_c31409	neurotransmitter receptor metabolic process	cell-cell signaling	P	Glutamine synthetase 2 cytoplasmic (EC 6.3.1.2) (Glutamate--ammonia ligase 2)
ruditapes_c31409	nitrogen compound metabolic process	other metabolic processes	P	Glutamine synthetase 2 cytoplasmic (EC 6.3.1.2) (Glutamate--ammonia ligase 2)
ruditapes_c31409	synaptogenesis	developmental processes	P	Glutamine synthetase 2 cytoplasmic (EC 6.3.1.2) (Glutamate--ammonia ligase 2)
ruditapes_c31409	synaptogenesis	cell organization and biogenesis	P	Glutamine synthetase 2 cytoplasmic (EC 6.3.1.2) (Glutamate--ammonia ligase 2)
ruditapes_c31409	glutamine biosynthetic process	other metabolic processes	P	Glutamine synthetase 2 cytoplasmic (EC 6.3.1.2) (Glutamate--ammonia ligase 2)
ruditapes_c31409	glutamate catabolic process	other metabolic processes	P	Glutamine synthetase 2 cytoplasmic (EC 6.3.1.2) (Glutamate--ammonia ligase 2)
ruditapes_c22434	ribosomal large subunit biogenesis	other biological processes	P	Protein MAK11 (Maintenance of killer protein 11)
ruditapes_c22434	ribosome biogenesis	other biological processes	P	Protein MAK11 (Maintenance of killer protein 11)
ruditapes_c22434	"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	Protein MAK11 (Maintenance of killer protein 11)
ruditapes_c22434	"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	Protein MAK11 (Maintenance of killer protein 11)
ruditapes_c22434	ribosomal large subunit assembly	cell organization and biogenesis	P	Protein MAK11 (Maintenance of killer protein 11)
ruditapes_lrc26843	oxygen transport	transport	P	Sex-specific storage-protein 2 (SP 2) (Arylphorin)
ruditapes_lrc26843	transport	transport	P	Sex-specific storage-protein 2 (SP 2) (Arylphorin)
ruditapes_c36871	positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	regulation of amino acid metabolic process	other metabolic processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	cellular nitrogen compound metabolic process	other metabolic processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	M/G1 transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	M/G1 transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	M/G1 transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	gene expression	other metabolic processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	gene expression	other metabolic processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	regulation of apoptosis	death	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	apoptosis	death	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	interspecies interaction between organisms	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	regulation of apoptosis	death	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	cellular nitrogen compound metabolic process	other metabolic processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	gene expression	other metabolic processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	apoptosis	death	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	cell cycle checkpoint	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	regulation of apoptosis	death	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	mRNA metabolic process	RNA metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	proteolysis	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	mRNA metabolic process	RNA metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	cellular nitrogen compound metabolic process	other metabolic processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	protein polyubiquitination	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	regulation of amino acid metabolic process	other metabolic processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	S phase of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	regulation of amino acid metabolic process	other metabolic processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	RNA metabolic process	RNA metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	S phase of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	viral reproduction	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	viral reproduction	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent"	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	RNA metabolic process	RNA metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	interspecies interaction between organisms	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	viral reproduction	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent"	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	proteolysis	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	mRNA metabolic process	RNA metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent"	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	interspecies interaction between organisms	other biological processes	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	RNA metabolic process	RNA metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	proteolysis	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	apoptosis	death	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	protein polyubiquitination	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	cell cycle checkpoint	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	S phase of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_s37424	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	protein polyubiquitination	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	cell cycle checkpoint	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c36871	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c38075	regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome component C5) (Proteasome gamma chain)
ruditapes_c14299	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Early transcription factor 82 kDa subunit (ETF large subunit) (VETF A7 subunit) (Vaccinia virus early transcription factor large subunit) (VETF large subunit)
ruditapes_c14299	"transcription, DNA-dependent"	RNA metabolism	P	Early transcription factor 82 kDa subunit (ETF large subunit) (VETF A7 subunit) (Vaccinia virus early transcription factor large subunit) (VETF large subunit)
ruditapes_c14299	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Early transcription factor 82 kDa subunit (ETF large subunit) (VETF A7 subunit) (Vaccinia virus early transcription factor large subunit) (VETF large subunit)
ruditapes_c27231	germ cell migration	other biological processes	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_c27231	axon guidance	developmental processes	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_c27231	axon guidance	cell organization and biogenesis	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_c27231	histone methylation	protein metabolism	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_c27231	histone methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_c27231	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_c27231	histone H3-K4 methylation	protein metabolism	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_c27231	histone H3-K4 methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_c27231	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_c27231	"transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_c27231	multicellular organismal development	developmental processes	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_c27231	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase trithorax (EC 2.1.1.43) (Lysine N-methyltransferase 2A)
ruditapes_lrc31623	transport	transport	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_lrc31623	aerobic respiration	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_lrc31623	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_lrc31623	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes2_c2384	positive regulation of killing of cells of another organism	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes2_c2187	positive regulation of nitric-oxide synthase activity	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes2_c2384	positive regulation of nitric-oxide synthase activity	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes_c7180	positive regulation of humoral immune response mediated by circulating immunoglobulin	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes2_c2384	positive regulation of nitric-oxide synthase biosynthetic process	other metabolic processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes2_c2187	positive regulation of nitric-oxide synthase biosynthetic process	other metabolic processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes_c7180	positive regulation of nitric-oxide synthase activity	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes_c9472	positive regulation of killing of cells of another organism	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes2_c3437	positive regulation of humoral immune response mediated by circulating immunoglobulin	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes_c9472	positive regulation of humoral immune response mediated by circulating immunoglobulin	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes2_c3437	positive regulation of nitric-oxide synthase activity	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes_c7180	positive regulation of nitric-oxide synthase biosynthetic process	other metabolic processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes2_c3437	positive regulation of killing of cells of another organism	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes2_c3437	positive regulation of nitric-oxide synthase biosynthetic process	other metabolic processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes_c9472	positive regulation of nitric-oxide synthase activity	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes2_c2187	positive regulation of killing of cells of another organism	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes_c7180	positive regulation of killing of cells of another organism	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes_c9472	positive regulation of nitric-oxide synthase biosynthetic process	other metabolic processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes2_c2187	positive regulation of humoral immune response mediated by circulating immunoglobulin	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes2_c2384	positive regulation of humoral immune response mediated by circulating immunoglobulin	other biological processes	P	Low affinity immunoglobulin epsilon Fc receptor (Fc-epsilon-RII) (Lymphocyte IgE receptor) (CD antigen CD23)
ruditapes_lrc36274	acute-phase response	stress response	P	Serum amyloid A-1 protein
ruditapes2_lrc5035	acute-phase response	stress response	P	Serum amyloid A-1 protein
ruditapes2_lrc2113	acute-phase response	stress response	P	Serum amyloid A-1 protein
ruditapes2_lrc5081	acute-phase response	stress response	P	Serum amyloid A-1 protein
ruditapes2_c1518	acute-phase response	stress response	P	Serum amyloid A-1 protein
ruditapes_lrc36910	acute-phase response	stress response	P	Serum amyloid A-1 protein
ruditapes_lrc34824	acute-phase response	stress response	P	Serum amyloid A-1 protein
ruditapes_c6010	acute-phase response	stress response	P	Serum amyloid A-2 protein
ruditapes2_lrc4164	acute-phase response	stress response	P	Serum amyloid A-2 protein
ruditapes2_lrc3154	acute-phase response	stress response	P	Serum amyloid A-2 protein
ruditapes_lrc32288	acute-phase response	stress response	P	Serum amyloid A-2 protein
ruditapes_c21112	glutathione biosynthetic process	other metabolic processes	P	Gamma-glutamyltranspeptidase 1 (GGT 1) (EC 2.3.2.2) (Gamma-glutamyltransferase 1) (Glutathione hydrolase 1) (EC 3.4.19.13) (Leukotriene-C4 hydrolase) (EC 3.4.19.14) (CD antigen CD224) [Cleaved into: Gamma-glutamyltranspeptidase 1 heavy chain; Gamma-glutamyltranspeptidase 1 light chain]
ruditapes_c21112	regulation of immune system process	other biological processes	P	Gamma-glutamyltranspeptidase 1 (GGT 1) (EC 2.3.2.2) (Gamma-glutamyltransferase 1) (Glutathione hydrolase 1) (EC 3.4.19.13) (Leukotriene-C4 hydrolase) (EC 3.4.19.14) (CD antigen CD224) [Cleaved into: Gamma-glutamyltranspeptidase 1 heavy chain; Gamma-glutamyltranspeptidase 1 light chain]
ruditapes_c21112	regulation of inflammatory response	stress response	P	Gamma-glutamyltranspeptidase 1 (GGT 1) (EC 2.3.2.2) (Gamma-glutamyltransferase 1) (Glutathione hydrolase 1) (EC 3.4.19.13) (Leukotriene-C4 hydrolase) (EC 3.4.19.14) (CD antigen CD224) [Cleaved into: Gamma-glutamyltranspeptidase 1 heavy chain; Gamma-glutamyltranspeptidase 1 light chain]
ruditapes_c21112	cysteine biosynthetic process	other metabolic processes	P	Gamma-glutamyltranspeptidase 1 (GGT 1) (EC 2.3.2.2) (Gamma-glutamyltransferase 1) (Glutathione hydrolase 1) (EC 3.4.19.13) (Leukotriene-C4 hydrolase) (EC 3.4.19.14) (CD antigen CD224) [Cleaved into: Gamma-glutamyltranspeptidase 1 heavy chain; Gamma-glutamyltranspeptidase 1 light chain]
ruditapes_c21112	spermatogenesis	other biological processes	P	Gamma-glutamyltranspeptidase 1 (GGT 1) (EC 2.3.2.2) (Gamma-glutamyltransferase 1) (Glutathione hydrolase 1) (EC 3.4.19.13) (Leukotriene-C4 hydrolase) (EC 3.4.19.14) (CD antigen CD224) [Cleaved into: Gamma-glutamyltranspeptidase 1 heavy chain; Gamma-glutamyltranspeptidase 1 light chain]
ruditapes_c16924	"DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	"DNA damage response, signal transduction by p53 class mediator"	stress response	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	follicular dendritic cell differentiation	other biological processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	defense response to protozoan	stress response	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	humoral immune response mediated by circulating immunoglobulin	other biological processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	"transcription, DNA-dependent"	RNA metabolism	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	negative regulation of interleukin-8 biosynthetic process	other metabolic processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	marginal zone B cell differentiation	developmental processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	T-helper 2 cell differentiation	developmental processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	negative regulation of apoptosis	death	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	"regulation of transcription, DNA-dependent"	RNA metabolism	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	antimicrobial humoral response	other biological processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	positive regulation of translation	protein metabolism	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	regulation of NF-kappaB import into nucleus	transport	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	response to virus	other biological processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	spleen development	developmental processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	germinal center formation	other biological processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	positive regulation of interferon-gamma production	other biological processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	regulation of apoptosis	death	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	I-kappaB kinase/NF-kappaB cascade	signal transduction	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	regulation of DNA binding	other biological processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	maintenance of protein location in nucleus	other biological processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	extracellular matrix organization	cell organization and biogenesis	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	T-helper 1 type immune response	other biological processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	"protein import into nucleus, translocation"	transport	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	response to UV-C	other biological processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	negative regulation of tumor necrosis factor biosynthetic process	other metabolic processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	response to DNA damage stimulus	stress response	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	defense response to bacterium	stress response	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	positive regulation of interleukin-10 biosynthetic process	other metabolic processes	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	signal transduction	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	stress response	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes_c16924	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	death	P	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)
ruditapes2_c2435	'de novo' IMP biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthetic protein ADE1 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)]
ruditapes2_c2435	metabolic process	other metabolic processes	P	Bifunctional purine biosynthetic protein ADE1 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)]
ruditapes2_c2435	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthetic protein ADE1 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)]
ruditapes2_c2435	purine base biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthetic protein ADE1 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)]
ruditapes_c27968	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin)
ruditapes_c27968	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin)
ruditapes_c27968	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin)
ruditapes_c27968	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin)
ruditapes_lrc36386	signal transduction	signal transduction	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	positive regulation of satellite cell activation involved in skeletal muscle regeneration	stress response	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	positive regulation of satellite cell activation involved in skeletal muscle regeneration	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	sarcomere organization	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	response to muscle activity	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	protein complex assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	apoptosis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	muscle maintenance	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	muscle organ development	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	autolysis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	negative regulation of apoptosis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	positive regulation of satellite cell activation involved in skeletal muscle regeneration	stress response	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	positive regulation of satellite cell activation involved in skeletal muscle regeneration	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	myofibril assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	positive regulation of proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	sarcomere organization	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	sarcomere organization	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	response to calcium ion	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	myofibril assembly	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	negative regulation of apoptosis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	myofibril assembly	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	myofibril assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	signal transduction	signal transduction	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	positive regulation of proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	muscle organ development	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	response to drug	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	response to muscle activity	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	response to drug	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	apoptosis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	response to calcium ion	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	muscle maintenance	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	sarcomere organization	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c297	autolysis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	protein complex assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc36386	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_c22581	proteolysis	protein metabolism	P	Retrovirus-related Pol polyprotein from transposon 297 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c22581	DNA integration	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 297 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c22581	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon 297 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c20414	endoderm development	developmental processes	P	Embryonic growth/differentiation factor 1 (GDF-1)
ruditapes_c20414	signal transduction	signal transduction	P	Embryonic growth/differentiation factor 1 (GDF-1)
ruditapes_c20414	mesoderm development	developmental processes	P	Embryonic growth/differentiation factor 1 (GDF-1)
ruditapes_c20414	growth	other biological processes	P	Embryonic growth/differentiation factor 1 (GDF-1)
ruditapes_c20414	in utero embryonic development	developmental processes	P	Embryonic growth/differentiation factor 1 (GDF-1)
ruditapes_c26547	aromatic compound catabolic process	other metabolic processes	P	(S)-mandelate dehydrogenase (EC 1.1.99.31) (L(+)-mandelate dehydrogenase) (MDH)
ruditapes2_c5924	aromatic compound catabolic process	other metabolic processes	P	(S)-mandelate dehydrogenase (EC 1.1.99.31) (L(+)-mandelate dehydrogenase) (MDH)
ruditapes2_c5924	oxidation reduction	other metabolic processes	P	(S)-mandelate dehydrogenase (EC 1.1.99.31) (L(+)-mandelate dehydrogenase) (MDH)
ruditapes_c26547	oxidation reduction	other metabolic processes	P	(S)-mandelate dehydrogenase (EC 1.1.99.31) (L(+)-mandelate dehydrogenase) (MDH)
ruditapes_c26547	mandelate metabolic process	other metabolic processes	P	(S)-mandelate dehydrogenase (EC 1.1.99.31) (L(+)-mandelate dehydrogenase) (MDH)
ruditapes2_c5924	mandelate metabolic process	other metabolic processes	P	(S)-mandelate dehydrogenase (EC 1.1.99.31) (L(+)-mandelate dehydrogenase) (MDH)
ruditapes2_c2174	mRNA stabilization	RNA metabolism	P	Polyadenylate-binding protein 1-A (PABP-1-A) (Poly(A)-binding protein 1-A) (xPABP1-A) (Cytoplasmic poly(A)-binding protein 1-A)
ruditapes2_c2174	mRNA processing	RNA metabolism	P	Polyadenylate-binding protein 1-A (PABP-1-A) (Poly(A)-binding protein 1-A) (xPABP1-A) (Cytoplasmic poly(A)-binding protein 1-A)
ruditapes2_c2174	translation	protein metabolism	P	Polyadenylate-binding protein 1-A (PABP-1-A) (Poly(A)-binding protein 1-A) (xPABP1-A) (Cytoplasmic poly(A)-binding protein 1-A)
ruditapes2_c2174	regulation of translation	protein metabolism	P	Polyadenylate-binding protein 1-A (PABP-1-A) (Poly(A)-binding protein 1-A) (xPABP1-A) (Cytoplasmic poly(A)-binding protein 1-A)
ruditapes2_c2174	negative regulation of nuclear-transcribed mRNA poly(A) tail shortening	RNA metabolism	P	Polyadenylate-binding protein 1-A (PABP-1-A) (Poly(A)-binding protein 1-A) (xPABP1-A) (Cytoplasmic poly(A)-binding protein 1-A)
ruditapes_c37533	protein amino acid ADP-ribosylation	protein metabolism	P	T-cell ecto-ADP-ribosyltransferase 2 (EC 2.4.2.31) (ADP-ribosyltransferase C2 and C3 toxin-like 2) (ARTC2) (Alloantigen Rt6.2) (Mono(ADP-ribosyl)transferase 2B) (T-cell NAD(P)(+)--arginine ADP-ribosyltransferase 2) (T-cell mono(ADP-ribosyl)transferase 2) (T-cell surface protein Rt6.2)
ruditapes_c37533	peptidyl-arginine ADP-ribosylation	protein metabolism	P	T-cell ecto-ADP-ribosyltransferase 2 (EC 2.4.2.31) (ADP-ribosyltransferase C2 and C3 toxin-like 2) (ARTC2) (Alloantigen Rt6.2) (Mono(ADP-ribosyl)transferase 2B) (T-cell NAD(P)(+)--arginine ADP-ribosyltransferase 2) (T-cell mono(ADP-ribosyl)transferase 2) (T-cell surface protein Rt6.2)
ruditapes_c9533	viral reproduction	other biological processes	P	36 kDa major membrane protein F5
ruditapes_c29173	sporulation resulting in formation of a cellular spore	other biological processes	P	C-factor (C signal)
ruditapes_c10075	metabolic process	other metabolic processes	P	C-factor (C signal)
ruditapes_c10075	oxidation reduction	other metabolic processes	P	C-factor (C signal)
ruditapes_c29173	metabolic process	other metabolic processes	P	C-factor (C signal)
ruditapes_c10075	sporulation resulting in formation of a cellular spore	other biological processes	P	C-factor (C signal)
ruditapes_c29173	oxidation reduction	other metabolic processes	P	C-factor (C signal)
ruditapes_c12734	spermidine biosynthetic process	other metabolic processes	P	Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19)
ruditapes_c12734	arginine catabolic process	other metabolic processes	P	Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19)
ruditapes_c12734	putrescine biosynthetic process	other metabolic processes	P	Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19)
ruditapes_c12734	polyamine biosynthetic process	other metabolic processes	P	Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19)
ruditapes_c11334	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c11334	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c11334	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c8463	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Metallothionein expression activator
ruditapes_lrc9079	regulation of transcription during G1 phase of mitotic cell cycle	cell cycle and proliferation	P	Metallothionein expression activator
ruditapes_lrc9079	regulation of transcription during G1 phase of mitotic cell cycle	RNA metabolism	P	Metallothionein expression activator
ruditapes_c8463	"transcription, DNA-dependent"	RNA metabolism	P	Metallothionein expression activator
ruditapes_lrc9079	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Metallothionein expression activator
ruditapes_c8463	regulation of transcription during G1 phase of mitotic cell cycle	cell cycle and proliferation	P	Metallothionein expression activator
ruditapes_c8463	regulation of transcription during G1 phase of mitotic cell cycle	RNA metabolism	P	Metallothionein expression activator
ruditapes_lrc9079	"transcription, DNA-dependent"	RNA metabolism	P	Metallothionein expression activator
ruditapes_c23139	response to stress	stress response	P	Low calcium response locus protein H
ruditapes_c4379	metabolic process	other metabolic processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes_c3839	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes_c3839	response to estrogen stimulus	other biological processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes2_c3034	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes_c4379	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes_c4379	establishment of blood-nerve barrier	developmental processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes_c4379	response to estrogen stimulus	other biological processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes_c3839	establishment of blood-nerve barrier	developmental processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes2_c3034	metabolic process	other metabolic processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes2_c3034	response to estrogen stimulus	other biological processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes2_c3034	establishment of blood-nerve barrier	developmental processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes_c3839	metabolic process	other metabolic processes	P	Glutathione S-transferase Mu 3 (EC 2.5.1.18) (GST class-mu 3) (GSTM3-3) (hGSTM3-3)
ruditapes_c12818	DNA methylation on adenine	DNA metabolism	P	Retron EC67 DNA adenine methylase (EC 2.1.1.72) (M.Eco67Dam) (ORF1-EC67 DAM)
ruditapes_c12818	methylation	other metabolic processes	P	Retron EC67 DNA adenine methylase (EC 2.1.1.72) (M.Eco67Dam) (ORF1-EC67 DAM)
ruditapes_c12818	DNA replication	DNA metabolism	P	Retron EC67 DNA adenine methylase (EC 2.1.1.72) (M.Eco67Dam) (ORF1-EC67 DAM)
ruditapes2_c2681	RNA-dependent DNA replication	DNA metabolism	P	RNA-directed DNA polymerase from mobile element jockey (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c12969	RNA-dependent DNA replication	DNA metabolism	P	RNA-directed DNA polymerase from mobile element jockey (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c19067	RNA-dependent DNA replication	DNA metabolism	P	RNA-directed DNA polymerase from mobile element jockey (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c16815	RNA-dependent DNA replication	DNA metabolism	P	RNA-directed DNA polymerase from mobile element jockey (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c14150	RNA-dependent DNA replication	DNA metabolism	P	RNA-directed DNA polymerase from mobile element jockey (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c22322	phosphorylation	other metabolic processes	P	NAD(+) kinase (EC 2.7.1.23) (Unknown transcript 1 protein)
ruditapes_c22322	NADP biosynthetic process	other metabolic processes	P	NAD(+) kinase (EC 2.7.1.23) (Unknown transcript 1 protein)
ruditapes_c22322	metabolic process	other metabolic processes	P	NAD(+) kinase (EC 2.7.1.23) (Unknown transcript 1 protein)
ruditapes_c22322	cellular iron ion homeostasis	other biological processes	P	NAD(+) kinase (EC 2.7.1.23) (Unknown transcript 1 protein)
ruditapes_c18270	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta)
ruditapes2_lrc4215	DNA integration	DNA metabolism	P	Integrase
ruditapes2_lrc4215	DNA recombination	DNA metabolism	P	Integrase
ruditapes_c34283	"G-protein signaling, coupled to cAMP nucleotide second messenger"	signal transduction	P	fMet-Leu-Phe receptor (fMLP receptor) (N-formyl peptide receptor) (FPR) (N-formylpeptide chemoattractant receptor)
ruditapes_c34283	chemotaxis	other biological processes	P	fMet-Leu-Phe receptor (fMLP receptor) (N-formyl peptide receptor) (FPR) (N-formylpeptide chemoattractant receptor)
ruditapes_c34283	cell motion	other biological processes	P	fMet-Leu-Phe receptor (fMLP receptor) (N-formyl peptide receptor) (FPR) (N-formylpeptide chemoattractant receptor)
ruditapes_c34283	nitric oxide mediated signal transduction	signal transduction	P	fMet-Leu-Phe receptor (fMLP receptor) (N-formyl peptide receptor) (FPR) (N-formylpeptide chemoattractant receptor)
ruditapes_c34283	activation of MAPK activity	signal transduction	P	fMet-Leu-Phe receptor (fMLP receptor) (N-formyl peptide receptor) (FPR) (N-formylpeptide chemoattractant receptor)
ruditapes_c34283	activation of MAPK activity	protein metabolism	P	fMet-Leu-Phe receptor (fMLP receptor) (N-formyl peptide receptor) (FPR) (N-formylpeptide chemoattractant receptor)
ruditapes_c34283	G-protein coupled receptor protein signaling pathway	signal transduction	P	fMet-Leu-Phe receptor (fMLP receptor) (N-formyl peptide receptor) (FPR) (N-formylpeptide chemoattractant receptor)
ruditapes_c34283	signal transduction	signal transduction	P	fMet-Leu-Phe receptor (fMLP receptor) (N-formyl peptide receptor) (FPR) (N-formylpeptide chemoattractant receptor)
ruditapes_c20024	translation	protein metabolism	P	30S ribosomal protein S4 (BS4)
ruditapes_c20843	ommatidial rotation	developmental processes	P	Protein scabrous
ruditapes_c20843	ommatidial rotation	cell organization and biogenesis	P	Protein scabrous
ruditapes_c20843	regulation of R8 cell spacing in compound eye	developmental processes	P	Protein scabrous
ruditapes_c20843	Notch signaling pathway	signal transduction	P	Protein scabrous
ruditapes_c20843	multicellular organismal development	developmental processes	P	Protein scabrous
ruditapes_c20843	compound eye development	developmental processes	P	Protein scabrous
ruditapes_c20843	signal transduction	signal transduction	P	Protein scabrous
ruditapes_c20843	cell differentiation	other biological processes	P	Protein scabrous
ruditapes_c20843	imaginal disc-derived wing margin morphogenesis	developmental processes	P	Protein scabrous
ruditapes_c20843	lateral inhibition	cell-cell signaling	P	Protein scabrous
ruditapes_c20843	female meiosis chromosome segregation	cell cycle and proliferation	P	Protein scabrous
ruditapes_c20843	R8 cell fate commitment	developmental processes	P	Protein scabrous
ruditapes_c20843	nervous system development	developmental processes	P	Protein scabrous
ruditapes_c28869	ion transport	transport	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c28869	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c28869	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c28869	transport	transport	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c28869	viral protein processing	protein metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c28869	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c28869	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c28869	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c28869	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c28869	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3 (NS2-3); Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes2_c1241	translation	protein metabolism	P	60S ribosomal protein L6 (Neoplasm-related protein C140)
ruditapes_lrc36687	proton transport	transport	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein)"
ruditapes_lrc36687	ion transport	transport	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein)"
ruditapes_lrc36687	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein)"
ruditapes_lrc36687	transport	transport	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein)"
ruditapes_lrc36687	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein)"
ruditapes_lrc36687	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein)"
ruditapes_c8852	cell adhesion	cell adhesion	P	Fimbria adhesin protein
ruditapes_c5293	proteolysis	protein metabolism	P	Proteasome subunit alpha type-4 (EC 3.4.25.1) (Macropain subunit C9) (Multicatalytic endopeptidase complex subunit C9) (Proteasome component C9) (Proteasome subunit L)
ruditapes_c3529	proteolysis	protein metabolism	P	Proteasome subunit alpha type-4 (EC 3.4.25.1) (Macropain subunit C9) (Multicatalytic endopeptidase complex subunit C9) (Proteasome component C9) (Proteasome subunit L)
ruditapes_c5293	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-4 (EC 3.4.25.1) (Macropain subunit C9) (Multicatalytic endopeptidase complex subunit C9) (Proteasome component C9) (Proteasome subunit L)
ruditapes_c3529	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-4 (EC 3.4.25.1) (Macropain subunit C9) (Multicatalytic endopeptidase complex subunit C9) (Proteasome component C9) (Proteasome subunit L)
ruditapes_c3529	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-4 (EC 3.4.25.1) (Macropain subunit C9) (Multicatalytic endopeptidase complex subunit C9) (Proteasome component C9) (Proteasome subunit L)
ruditapes_c5293	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-4 (EC 3.4.25.1) (Macropain subunit C9) (Multicatalytic endopeptidase complex subunit C9) (Proteasome component C9) (Proteasome subunit L)
ruditapes_c29976	signal transduction	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (PLC-85) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-2) (PLC-delta-2) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c29976	lipid catabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (PLC-85) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-2) (PLC-delta-2) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c29976	lipid metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (PLC-85) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-2) (PLC-delta-2) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes2_c1221	negative regulation of follicle-stimulating hormone secretion	transport	P	Follistatin (FS) (Activin-binding protein)
ruditapes2_c1221	negative regulation of follicle-stimulating hormone secretion	cell-cell signaling	P	Follistatin (FS) (Activin-binding protein)
ruditapes2_c1221	negative regulation of activin receptor signaling pathway	signal transduction	P	Follistatin (FS) (Activin-binding protein)
ruditapes2_c1221	hemopoietic progenitor cell differentiation	developmental processes	P	Follistatin (FS) (Activin-binding protein)
ruditapes2_c1221	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Follistatin (FS) (Activin-binding protein)
ruditapes2_c1221	positive regulation of hair follicle development	developmental processes	P	Follistatin (FS) (Activin-binding protein)
ruditapes_c9324	metabolic process	other metabolic processes	P	Phytoene synthase (EC 2.5.1.32)
ruditapes_c9324	biosynthetic process	other metabolic processes	P	Phytoene synthase (EC 2.5.1.32)
ruditapes_c9324	carotenoid biosynthetic process	other metabolic processes	P	Phytoene synthase (EC 2.5.1.32)
ruditapes_c30073	photosynthesis	other metabolic processes	P	Phytoene desaturase (lycopene-forming) (EC 1.3.99.31) (4-step phytoene desaturase) (Phytoene dehydrogenase)
ruditapes_c30073	chlorophyll biosynthetic process	other metabolic processes	P	Phytoene desaturase (lycopene-forming) (EC 1.3.99.31) (4-step phytoene desaturase) (Phytoene dehydrogenase)
ruditapes_c30073	carotenoid biosynthetic process	other metabolic processes	P	Phytoene desaturase (lycopene-forming) (EC 1.3.99.31) (4-step phytoene desaturase) (Phytoene dehydrogenase)
ruditapes_c30073	oxidation reduction	other metabolic processes	P	Phytoene desaturase (lycopene-forming) (EC 1.3.99.31) (4-step phytoene desaturase) (Phytoene dehydrogenase)
ruditapes_c19111	regulation of cell proliferation	cell cycle and proliferation	P	Gastrin-releasing peptide receptor (GRP-R) (GRP-preferring bombesin receptor)
ruditapes_c19111	signal transduction	signal transduction	P	Gastrin-releasing peptide receptor (GRP-R) (GRP-preferring bombesin receptor)
ruditapes_c19111	G-protein coupled receptor protein signaling pathway	signal transduction	P	Gastrin-releasing peptide receptor (GRP-R) (GRP-preferring bombesin receptor)
ruditapes_c19111	social behavior	other biological processes	P	Gastrin-releasing peptide receptor (GRP-R) (GRP-preferring bombesin receptor)
ruditapes_c19111	learning or memory	other biological processes	P	Gastrin-releasing peptide receptor (GRP-R) (GRP-preferring bombesin receptor)
ruditapes_c19111	bombesin receptor signaling pathway	signal transduction	P	Gastrin-releasing peptide receptor (GRP-R) (GRP-preferring bombesin receptor)
ruditapes2_c3045	interspecies interaction between organisms	other biological processes	P	Protein E6
ruditapes2_c3045	evasion by virus of host immune response	stress response	P	Protein E6
ruditapes2_c3045	"transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes2_c3045	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c10222	elevation of cytosolic calcium ion concentration	other biological processes	P	Thyrotropin-releasing hormone receptor (TRH-R) (Thyroliberin receptor)
ruditapes_c10222	signal transduction	signal transduction	P	Thyrotropin-releasing hormone receptor (TRH-R) (Thyroliberin receptor)
ruditapes_c10222	G-protein coupled receptor protein signaling pathway	signal transduction	P	Thyrotropin-releasing hormone receptor (TRH-R) (Thyroliberin receptor)
ruditapes_lrc37069	oxidation reduction	other metabolic processes	P	Epididymal secretory glutathione peroxidase (EC 1.11.1.9) (Epididymis-specific glutathione peroxidase-like protein) (EGLP) (Glutathione peroxidase 5) (GPx-5) (GSHPx-5) (Major androgen-regulated protein) (arMEP24)
ruditapes2_c41	response to oxidative stress	stress response	P	Epididymal secretory glutathione peroxidase (EC 1.11.1.9) (Epididymis-specific glutathione peroxidase-like protein) (EGLP) (Glutathione peroxidase 5) (GPx-5) (GSHPx-5) (Major androgen-regulated protein) (arMEP24)
ruditapes2_c41	oxidation reduction	other metabolic processes	P	Epididymal secretory glutathione peroxidase (EC 1.11.1.9) (Epididymis-specific glutathione peroxidase-like protein) (EGLP) (Glutathione peroxidase 5) (GPx-5) (GSHPx-5) (Major androgen-regulated protein) (arMEP24)
ruditapes_lrc37069	response to oxidative stress	stress response	P	Epididymal secretory glutathione peroxidase (EC 1.11.1.9) (Epididymis-specific glutathione peroxidase-like protein) (EGLP) (Glutathione peroxidase 5) (GPx-5) (GSHPx-5) (Major androgen-regulated protein) (arMEP24)
ruditapes_c12161	"synaptic transmission, cholinergic"	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	receptor internalization	transport	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	receptor internalization	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	receptor internalization	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	retina development in camera-type eye	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	neurotransmitter receptor biosynthetic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	neurotransmitter receptor biosynthetic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	regulation of receptor recycling	signal transduction	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	regulation of receptor recycling	protein metabolism	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	synaptogenesis	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	acetylcholine catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	acetylcholine catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	regulation of axonogenesis	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	regulation of axonogenesis	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	protein tetramerization	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	neurotransmitter catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	neurotransmitter catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	choline metabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	regulation of dendrite morphogenesis	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	regulation of dendrite morphogenesis	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12161	synaptogenesis	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes2_c1685	oxidation reduction	other metabolic processes	P	Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1)
ruditapes2_c1685	metabolic process	other metabolic processes	P	Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1)
ruditapes2_c1685	glycolysis	other metabolic processes	P	Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1)
ruditapes_c37145	metabolic process	other metabolic processes	P	"Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) (S complex, 36 kDa subunit)"
ruditapes_c37145	oxidation reduction	other metabolic processes	P	"Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) (S complex, 36 kDa subunit)"
ruditapes_c37145	glycolysis	other metabolic processes	P	"Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) (S complex, 36 kDa subunit)"
ruditapes_c7404	protein complex assembly	cell organization and biogenesis	P	Cartilage matrix protein (Matrilin-1)
ruditapes_c12888	interspecies interaction between organisms	other biological processes	P	Replication enhancer protein (REn) (Protein AC3) (Protein AL3)
ruditapes_c12888	viral reproduction	other biological processes	P	Replication enhancer protein (REn) (Protein AC3) (Protein AL3)
ruditapes_c17612	oxidation reduction	other metabolic processes	P	Prostaglandin F synthase (EC 1.1.1.188) (Prostaglandin F2-alpha synthase)
ruditapes_c38619	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c5707	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c5707	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c33845	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c6453	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c33845	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c6453	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c5707	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c33845	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c38619	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c5707	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c33845	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c33845	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c38619	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c5707	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c6453	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c6453	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c5707	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c6453	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c6453	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c5707	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c33845	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c38619	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c38619	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c33845	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c6453	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c38619	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c33845	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c33845	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c38619	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c6453	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c5707	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c38619	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c5707	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c6453	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c6453	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c5707	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c33845	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c38619	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c38619	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c29616	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c29616	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c29616	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c29616	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c29616	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c29616	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c29616	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c29616	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c29616	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c29616	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c29616	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c11804	L-fucose catabolic process	other metabolic processes	P	"Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (ELAM-1 ligand fucosyltransferase) (Fucosyltransferase 4) (Fucosyltransferase IV) (Fuc-TIV) (FucT-IV) (Galactoside 3-L-fucosyltransferase)"
ruditapes_c11804	carbohydrate metabolic process	other metabolic processes	P	"Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (ELAM-1 ligand fucosyltransferase) (Fucosyltransferase 4) (Fucosyltransferase IV) (Fuc-TIV) (FucT-IV) (Galactoside 3-L-fucosyltransferase)"
ruditapes_c11804	protein amino acid glycosylation	protein metabolism	P	"Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (ELAM-1 ligand fucosyltransferase) (Fucosyltransferase 4) (Fucosyltransferase IV) (Fuc-TIV) (FucT-IV) (Galactoside 3-L-fucosyltransferase)"
ruditapes2_c4635	collagen metabolic process	other metabolic processes	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c3213	cell adhesion	cell adhesion	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c35414	cell adhesion	cell adhesion	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c34312	cell adhesion	cell adhesion	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c3213	signal transduction	signal transduction	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c34312	elastic fiber assembly	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c39385	collagen metabolic process	other metabolic processes	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c35414	elastic fiber assembly	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c3213	elastic fiber assembly	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c39385	cell adhesion	cell adhesion	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes2_c4635	actin cytoskeleton organization	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c39385	elastic fiber assembly	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes2_c4635	elastic fiber assembly	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c34312	collagen metabolic process	other metabolic processes	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c34312	actin cytoskeleton organization	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c3213	actin cytoskeleton organization	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c39385	signal transduction	signal transduction	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c35414	actin cytoskeleton organization	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c29721	actin cytoskeleton organization	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c35414	collagen metabolic process	other metabolic processes	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c29721	signal transduction	signal transduction	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c39385	actin cytoskeleton organization	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes2_c4635	cell adhesion	cell adhesion	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes2_c4635	signal transduction	signal transduction	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c29721	collagen metabolic process	other metabolic processes	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c3213	collagen metabolic process	other metabolic processes	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c29721	cell adhesion	cell adhesion	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c35414	signal transduction	signal transduction	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c34312	signal transduction	signal transduction	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c29721	elastic fiber assembly	cell organization and biogenesis	P	Tenascin-X (TN-X) (Hexabrachion-like protein)
ruditapes_c10335	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-10 (ORA1)
ruditapes_c10335	protein transport	transport	P	Ras-related protein Rab-10 (ORA1)
ruditapes_c12819	mitochondrial translational initiation	protein metabolism	P	"ATPase expression protein 2, mitochondrial"
ruditapes_c12819	mitochondrial translational initiation	cell organization and biogenesis	P	"ATPase expression protein 2, mitochondrial"
ruditapes_c12819	regulation of translation	protein metabolism	P	"ATPase expression protein 2, mitochondrial"
ruditapes2_c2387	protein amino acid phosphorylation	protein metabolism	P	Fibroblast growth factor receptor 1 (FGFR-1) (EC 2.7.10.1)
ruditapes2_c2387	positive regulation of cell proliferation	cell cycle and proliferation	P	Fibroblast growth factor receptor 1 (FGFR-1) (EC 2.7.10.1)
ruditapes2_c2387	fibroblast growth factor receptor signaling pathway	signal transduction	P	Fibroblast growth factor receptor 1 (FGFR-1) (EC 2.7.10.1)
ruditapes2_c2387	phosphorylation	other metabolic processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (EC 2.7.10.1)
ruditapes2_c1319	phosphorylation	other metabolic processes	P	Nitrogen permease reactivator protein (EC 2.7.11.1) (Serine/threonine-protein kinase NPR1)
ruditapes2_c1319	protein amino acid phosphorylation	protein metabolism	P	Nitrogen permease reactivator protein (EC 2.7.11.1) (Serine/threonine-protein kinase NPR1)
ruditapes2_c1319	regulation of nitrogen utilization	other metabolic processes	P	Nitrogen permease reactivator protein (EC 2.7.11.1) (Serine/threonine-protein kinase NPR1)
ruditapes_c16289	cytokinesis	other biological processes	P	Exocyst complex component SEC15
ruditapes_c16289	vesicle fusion	transport	P	Exocyst complex component SEC15
ruditapes_c16289	vesicle fusion	cell organization and biogenesis	P	Exocyst complex component SEC15
ruditapes_c16289	protein transport	transport	P	Exocyst complex component SEC15
ruditapes_c16289	vesicle docking during exocytosis	transport	P	Exocyst complex component SEC15
ruditapes_c16289	Golgi to plasma membrane transport	transport	P	Exocyst complex component SEC15
ruditapes_c16289	bipolar cellular bud site selection	cell organization and biogenesis	P	Exocyst complex component SEC15
ruditapes_c16289	exocytosis	transport	P	Exocyst complex component SEC15
ruditapes_c16289	transport	transport	P	Exocyst complex component SEC15
ruditapes_c26283	signal transduction	signal transduction	P	Tyramine/octopamine receptor (Tyr/Oct-Dro)
ruditapes_c26283	octopamine/tyramine signaling pathway	signal transduction	P	Tyramine/octopamine receptor (Tyr/Oct-Dro)
ruditapes_c26283	G-protein coupled receptor protein signaling pathway	signal transduction	P	Tyramine/octopamine receptor (Tyr/Oct-Dro)
ruditapes_c26283	sensory perception of smell	other biological processes	P	Tyramine/octopamine receptor (Tyr/Oct-Dro)
ruditapes_c12315	response to wounding	stress response	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	"negative regulation of synaptic transmission, cholinergic"	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	synaptogenesis	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	synaptogenesis	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	neurotransmitter receptor biosynthetic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	neurotransmitter receptor biosynthetic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	nervous system development	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	cell proliferation	cell cycle and proliferation	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	protein tetramerization	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	acetylcholine catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	acetylcholine catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	retina development in camera-type eye	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	DNA replication	DNA metabolism	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	muscle organ development	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	synaptic transmission	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	choline metabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	positive regulation of protein secretion	transport	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	regulation of receptor recycling	signal transduction	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	regulation of receptor recycling	protein metabolism	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	neurotransmitter catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	neurotransmitter catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	receptor internalization	transport	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	receptor internalization	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	receptor internalization	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	cell adhesion	cell adhesion	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	"synaptic transmission, cholinergic"	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	neurotransmitter biosynthetic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	neurotransmitter biosynthetic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	regulation of dendrite morphogenesis	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	regulation of dendrite morphogenesis	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	osteoblast development	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	amyloid precursor protein metabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	regulation of axonogenesis	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	regulation of axonogenesis	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	acetylcholine catabolic process in synaptic cleft	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c12315	acetylcholine catabolic process in synaptic cleft	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c7114	metabolic process	other metabolic processes	P	Iduronate 2-sulfatase (EC 3.1.6.13) (Alpha-L-iduronate sulfate sulfatase) (Idursulfase) [Cleaved into: Iduronate 2-sulfatase 42 kDa chain; Iduronate 2-sulfatase 14 kDa chain]
ruditapes_c8317	ATP synthesis coupled electron transport	other metabolic processes	P	NAD-reducing hydrogenase HoxS subunit gamma (EC 1.12.1.2)
ruditapes_c8317	oxidation reduction	other metabolic processes	P	NAD-reducing hydrogenase HoxS subunit gamma (EC 1.12.1.2)
ruditapes_c16654	oxidation reduction	other metabolic processes	P	NAD-reducing hydrogenase HoxS subunit beta (EC 1.12.1.2)
ruditapes_c1286	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Probable DNA polymerase (EC 2.7.7.7)
ruditapes_c27453	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Probable DNA polymerase (EC 2.7.7.7)
ruditapes_c1286	DNA replication	DNA metabolism	P	Probable DNA polymerase (EC 2.7.7.7)
ruditapes_c27453	DNA replication	DNA metabolism	P	Probable DNA polymerase (EC 2.7.7.7)
ruditapes_c17127	rRNA processing	RNA metabolism	P	60S ribosomal protein L5
ruditapes_lrc34578	translation	protein metabolism	P	60S ribosomal protein L5
ruditapes_lrc34578	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L5
ruditapes_c17127	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L5
ruditapes_c17127	translation	protein metabolism	P	60S ribosomal protein L5
ruditapes_lrc34578	rRNA processing	RNA metabolism	P	60S ribosomal protein L5
ruditapes_c20068	wing disc dorsal/ventral pattern formation	developmental processes	P	Annexin-B9 (Annexin IX) (Annexin-9)
ruditapes_c27885	protein modification process	protein metabolism	P	Ubiquitin-activating enzyme E1 1
ruditapes_c27885	protein ubiquitination	protein metabolism	P	Ubiquitin-activating enzyme E1 1
ruditapes_c6979	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Cellulase A) (Endo-1,4-beta-glucanase A)"
ruditapes_c17736	metabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Cellulase A) (Endo-1,4-beta-glucanase A)"
ruditapes_c6979	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Cellulase A) (Endo-1,4-beta-glucanase A)"
ruditapes_c6979	cellulose catabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Cellulase A) (Endo-1,4-beta-glucanase A)"
ruditapes_c6979	metabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Cellulase A) (Endo-1,4-beta-glucanase A)"
ruditapes_c17736	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Cellulase A) (Endo-1,4-beta-glucanase A)"
ruditapes_c17736	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Cellulase A) (Endo-1,4-beta-glucanase A)"
ruditapes_c17736	cellulose catabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Cellulase A) (Endo-1,4-beta-glucanase A)"
ruditapes_c21748	bacteriocin immunity	other metabolic processes	P	Colicin-E1* immunity protein (ImmE1) (Microcin-E1* immunity protein)
ruditapes_c27451	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3] (Fragment)
ruditapes_c13765	pathogenesis	other biological processes	P	Apical membrane antigen 1 (Merozoite surface antigen)
ruditapes_c16823	regulation of blood vessel size	other biological processes	P	Ventricular natriuretic peptide (VNP)
ruditapes_c7273	cellulose catabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Spore germination protein 270-6)"
ruditapes_c7273	metabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Spore germination protein 270-6)"
ruditapes_c8650	sporulation resulting in formation of a cellular spore	other biological processes	P	"Endoglucanase (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Spore germination protein 270-6)"
ruditapes_c8650	cellulose catabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Spore germination protein 270-6)"
ruditapes_c8650	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Spore germination protein 270-6)"
ruditapes_c8650	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Spore germination protein 270-6)"
ruditapes_c7273	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Spore germination protein 270-6)"
ruditapes_c8650	metabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Spore germination protein 270-6)"
ruditapes_c7273	sporulation resulting in formation of a cellular spore	other biological processes	P	"Endoglucanase (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Spore germination protein 270-6)"
ruditapes_c7273	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (Cellulase) (Endo-1,4-beta-glucanase) (Spore germination protein 270-6)"
ruditapes_c1530	negative regulation of cell differentiation	other biological processes	P	Protein Wnt-4
ruditapes_c1530	branching morphogenesis of a tube	developmental processes	P	Protein Wnt-4
ruditapes_c1530	embryonic epithelial tube formation	developmental processes	P	Protein Wnt-4
ruditapes_c1530	kidney development	developmental processes	P	Protein Wnt-4
ruditapes_c1530	smooth muscle cell differentiation	other biological processes	P	Protein Wnt-4
ruditapes_c1530	regulation of cell-cell adhesion	cell adhesion	P	Protein Wnt-4
ruditapes_c1530	anatomical structure development	other biological processes	P	Protein Wnt-4
ruditapes_c1530	endoderm development	developmental processes	P	Protein Wnt-4
ruditapes_c1530	cell-cell signaling	cell-cell signaling	P	Protein Wnt-4
ruditapes_c1530	cell differentiation	other biological processes	P	Protein Wnt-4
ruditapes_c1530	negative regulation of gene expression	other metabolic processes	P	Protein Wnt-4
ruditapes_c1530	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein Wnt-4
ruditapes_c1530	androgen biosynthetic process	other metabolic processes	P	Protein Wnt-4
ruditapes_c1530	hormone metabolic process	other metabolic processes	P	Protein Wnt-4
ruditapes_c1530	positive regulation of collagen biosynthetic process	other metabolic processes	P	Protein Wnt-4
ruditapes_c1530	branching involved in ureteric bud morphogenesis	developmental processes	P	Protein Wnt-4
ruditapes_c1530	signal transduction	signal transduction	P	Protein Wnt-4
ruditapes_c1530	liver development	developmental processes	P	Protein Wnt-4
ruditapes_c1530	epithelial to mesenchymal transition	developmental processes	P	Protein Wnt-4
ruditapes_c1530	epithelial to mesenchymal transition	cell organization and biogenesis	P	Protein Wnt-4
ruditapes_c1530	Wnt receptor signaling pathway	signal transduction	P	Protein Wnt-4
ruditapes_c1530	tube morphogenesis	developmental processes	P	Protein Wnt-4
ruditapes_c1530	response to estradiol stimulus	other biological processes	P	Protein Wnt-4
ruditapes_c1530	negative regulation of steroid biosynthetic process	other metabolic processes	P	Protein Wnt-4
ruditapes_c1530	positive regulation of aldosterone biosynthetic process	other metabolic processes	P	Protein Wnt-4
ruditapes_c1530	mesonephros development	developmental processes	P	Protein Wnt-4
ruditapes_c1530	positive regulation of meiosis	cell cycle and proliferation	P	Protein Wnt-4
ruditapes_c1530	oocyte development	other biological processes	P	Protein Wnt-4
ruditapes_c1530	anterior/posterior pattern formation	developmental processes	P	Protein Wnt-4
ruditapes_c1530	metanephros development	developmental processes	P	Protein Wnt-4
ruditapes_c1530	positive regulation of bone mineralization	developmental processes	P	Protein Wnt-4
ruditapes_c1530	negative regulation of fibroblast growth factor receptor signaling pathway	signal transduction	P	Protein Wnt-4
ruditapes_c1530	sex differentiation	other biological processes	P	Protein Wnt-4
ruditapes_c1530	female sex determination	developmental processes	P	Protein Wnt-4
ruditapes_c1530	female gonad development	developmental processes	P	Protein Wnt-4
ruditapes_c1530	positive regulation of osteoblast differentiation	developmental processes	P	Protein Wnt-4
ruditapes_c1530	thyroid stimulating hormone secreting cell differentiation	developmental processes	P	Protein Wnt-4
ruditapes_c1530	somatotropin secreting cell differentiation	developmental processes	P	Protein Wnt-4
ruditapes_c1530	multicellular organismal development	developmental processes	P	Protein Wnt-4
ruditapes_c1530	protein palmitoylation	protein metabolism	P	Protein Wnt-4
ruditapes_c1530	cell fate commitment	other biological processes	P	Protein Wnt-4
ruditapes_c1530	Wnt receptor signaling pathway through beta-catenin	signal transduction	P	Protein Wnt-4
ruditapes_c1530	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein Wnt-4
ruditapes_c1530	mesenchymal to epithelial transition	cell organization and biogenesis	P	Protein Wnt-4
ruditapes_c1530	immature T cell proliferation in the thymus	cell cycle and proliferation	P	Protein Wnt-4
ruditapes_c1530	immature T cell proliferation in the thymus	developmental processes	P	Protein Wnt-4
ruditapes_c1530	gamete generation	other biological processes	P	Protein Wnt-4
ruditapes_c1530	axis specification	developmental processes	P	Protein Wnt-4
ruditapes_c1530	mesenchymal to epithelial transition	developmental processes	P	Protein Wnt-4
ruditapes_c1530	male gonad development	developmental processes	P	Protein Wnt-4
ruditapes_c1530	adrenal gland development	developmental processes	P	Protein Wnt-4
ruditapes_c1530	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein Wnt-4
ruditapes_c1530	T cell differentiation in the thymus	developmental processes	P	Protein Wnt-4
ruditapes2_c3807	visual perception	other biological processes	P	Visinin
ruditapes2_c3807	response to stimulus	other biological processes	P	Visinin
ruditapes_c29498	keratinocyte differentiation	other biological processes	P	Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Epidermal TGase) (Transglutaminase K) (TG(K)) (TGK) (TGase K) (Transglutaminase-1) (TGase-1)
ruditapes_c29498	peptide cross-linking	protein metabolism	P	Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Epidermal TGase) (Transglutaminase K) (TG(K)) (TGK) (TGase K) (Transglutaminase-1) (TGase-1)
ruditapes_c29498	cell envelope organization	cell organization and biogenesis	P	Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Epidermal TGase) (Transglutaminase K) (TG(K)) (TGK) (TGase K) (Transglutaminase-1) (TGase-1)
ruditapes_c24708	keratinocyte differentiation	other biological processes	P	Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Epidermal TGase) (Transglutaminase K) (TG(K)) (TGK) (TGase K) (Transglutaminase-1) (TGase-1)
ruditapes_c24708	peptide cross-linking	protein metabolism	P	Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Epidermal TGase) (Transglutaminase K) (TG(K)) (TGK) (TGase K) (Transglutaminase-1) (TGase-1)
ruditapes_c24708	protein modification process	protein metabolism	P	Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Epidermal TGase) (Transglutaminase K) (TG(K)) (TGK) (TGase K) (Transglutaminase-1) (TGase-1)
ruditapes_c24708	cell envelope organization	cell organization and biogenesis	P	Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Epidermal TGase) (Transglutaminase K) (TG(K)) (TGK) (TGase K) (Transglutaminase-1) (TGase-1)
ruditapes_c29498	protein modification process	protein metabolism	P	Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Epidermal TGase) (Transglutaminase K) (TG(K)) (TGK) (TGase K) (Transglutaminase-1) (TGase-1)
ruditapes_c24708	keratinization	developmental processes	P	Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Epidermal TGase) (Transglutaminase K) (TG(K)) (TGK) (TGase K) (Transglutaminase-1) (TGase-1)
ruditapes_c29498	keratinization	developmental processes	P	Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Epidermal TGase) (Transglutaminase K) (TG(K)) (TGK) (TGase K) (Transglutaminase-1) (TGase-1)
ruditapes_c21863	behavioral response to pain	stress response	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	regulation of inhibitory postsynaptic membrane potential	cell-cell signaling	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	ionotropic glutamate receptor signaling pathway	signal transduction	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	membrane depolarization	other biological processes	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	"synaptic transmission, glutamatergic"	cell-cell signaling	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	signal transduction	signal transduction	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	regulation of synaptic plasticity	cell-cell signaling	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	"positive regulation of synaptic transmission, GABAergic"	cell-cell signaling	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	"negative regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	positive regulation of gamma-aminobutyric acid secretion	transport	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	positive regulation of gamma-aminobutyric acid secretion	cell-cell signaling	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	synaptic transmission	cell-cell signaling	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	ion transport	transport	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	regulation of membrane potential	other biological processes	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	regulation of short-term neuronal synaptic plasticity	cell-cell signaling	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	"negative regulation of synaptic transmission, GABAergic"	cell-cell signaling	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	regulation of excitatory postsynaptic membrane potential	cell-cell signaling	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	nervous system development	developmental processes	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	transport	transport	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c21863	adult behavior	other biological processes	P	"Glutamate receptor ionotropic, kainate 1 (GluK1) (Glutamate receptor 5) (GluR-5) (GluR5)"
ruditapes_c27356	metabolic process	other metabolic processes	P	Arylacetamide deacetylase (EC 3.1.1.3)
ruditapes_c27356	positive regulation of triglyceride catabolic process	other metabolic processes	P	Arylacetamide deacetylase (EC 3.1.1.3)
ruditapes_c19136	photosynthesis	other metabolic processes	P	Uncharacterized protein YifB
ruditapes_c19136	chlorophyll biosynthetic process	other metabolic processes	P	Uncharacterized protein YifB
ruditapes_c30109	biological_process	other biological processes	P	Alcohol sulfotransferase A (EC 2.8.2.2) (Androsterone-sulfating sulfotransferase) (AD-ST) (Hydroxysteroid sulfotransferase A) (STA) (ST-40) (Senescence marker protein 2A) (Sulfotransferase 2A2) (ST2A2)
ruditapes_c30109	steroid metabolic process	other metabolic processes	P	Alcohol sulfotransferase A (EC 2.8.2.2) (Androsterone-sulfating sulfotransferase) (AD-ST) (Hydroxysteroid sulfotransferase A) (STA) (ST-40) (Senescence marker protein 2A) (Sulfotransferase 2A2) (ST2A2)
ruditapes_c30109	lipid metabolic process	other metabolic processes	P	Alcohol sulfotransferase A (EC 2.8.2.2) (Androsterone-sulfating sulfotransferase) (AD-ST) (Hydroxysteroid sulfotransferase A) (STA) (ST-40) (Senescence marker protein 2A) (Sulfotransferase 2A2) (ST2A2)
ruditapes_c13434	tRNA processing	RNA metabolism	P	Ribonuclease P protein component (RNase P protein) (RNaseP protein) (EC 3.1.26.5) (Protein C5)
ruditapes_c28902	endocytosis	transport	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes_c28902	endocytosis	cell organization and biogenesis	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes_c28902	receptor-mediated endocytosis	transport	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes_c28902	receptor-mediated endocytosis	cell organization and biogenesis	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes_c24736	endocytosis	transport	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes_c24736	endocytosis	cell organization and biogenesis	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes_c24736	receptor-mediated endocytosis	transport	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes_c24736	receptor-mediated endocytosis	cell organization and biogenesis	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes2_c6161	receptor-mediated endocytosis	transport	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes2_c6161	receptor-mediated endocytosis	cell organization and biogenesis	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes2_c6161	endocytosis	transport	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes2_c6161	endocytosis	cell organization and biogenesis	P	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)
ruditapes_c20439	nitrate assimilation	other metabolic processes	P	Nitrite reductase [NAD(P)H] (EC 1.7.1.4)
ruditapes_c20439	oxidation reduction	other metabolic processes	P	Nitrite reductase [NAD(P)H] (EC 1.7.1.4)
ruditapes_c23944	glycolysis	other metabolic processes	P	L-lactate dehydrogenase B (LDH-B) (EC 1.1.1.27) (Fragment)
ruditapes_c23944	oxidation reduction	other metabolic processes	P	L-lactate dehydrogenase B (LDH-B) (EC 1.1.1.27) (Fragment)
ruditapes_c23944	carbohydrate metabolic process	other metabolic processes	P	L-lactate dehydrogenase B (LDH-B) (EC 1.1.1.27) (Fragment)
ruditapes_c23944	response to stress	stress response	P	L-lactate dehydrogenase B (LDH-B) (EC 1.1.1.27) (Fragment)
ruditapes_c23944	cellular carbohydrate metabolic process	other metabolic processes	P	L-lactate dehydrogenase B (LDH-B) (EC 1.1.1.27) (Fragment)
ruditapes2_c1391	proteolysis	protein metabolism	P	"Cytochrome b-c1 complex subunit 2, mitochondrial (Complex III subunit 2) (Core protein II) (Ubiquinol-cytochrome-c reductase complex core protein 2)"
ruditapes2_c1391	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 2, mitochondrial (Complex III subunit 2) (Core protein II) (Ubiquinol-cytochrome-c reductase complex core protein 2)"
ruditapes2_c1391	transport	transport	P	"Cytochrome b-c1 complex subunit 2, mitochondrial (Complex III subunit 2) (Core protein II) (Ubiquinol-cytochrome-c reductase complex core protein 2)"
ruditapes_c3610	transport	transport	P	RNA2 polyprotein (Genome polyprotein M) (P2) [Cleaved into: Movement protein (MP); Large coat protein (LCP) (Coat protein VP37); Small coat protein (SCP) (Coat protein VP23)]
ruditapes_c3610	"spread of virus within host, cell to cell"	other biological processes	P	RNA2 polyprotein (Genome polyprotein M) (P2) [Cleaved into: Movement protein (MP); Large coat protein (LCP) (Coat protein VP37); Small coat protein (SCP) (Coat protein VP23)]
ruditapes_c17914	ATP catabolic process	other metabolic processes	P	"Dynein beta chain, ciliary"
ruditapes_c17914	cell projection organization	cell organization and biogenesis	P	"Dynein beta chain, ciliary"
ruditapes_c17914	microtubule-based movement	other biological processes	P	"Dynein beta chain, ciliary"
ruditapes_c29087	electron transport chain	other metabolic processes	P	Cytochrome c1
ruditapes_c29087	transport	transport	P	Cytochrome c1
ruditapes2_c1821	cellular metabolic process	other metabolic processes	P	Uncharacterized protein in petC 3'region (Fragment)
ruditapes2_c1821	cellular biosynthetic process	other metabolic processes	P	Uncharacterized protein in petC 3'region (Fragment)
ruditapes_c22911	antibiotic biosynthetic process	other metabolic processes	P	Microcin B17-processing protein McbD
ruditapes_c12984	vasoconstriction	other biological processes	P	Kell blood group glycoprotein (EC 3.4.24.-) (CD antigen CD238)
ruditapes_c12984	proteolysis	protein metabolism	P	Kell blood group glycoprotein (EC 3.4.24.-) (CD antigen CD238)
ruditapes_c5371	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (CYP-S1) (Cyclophilin B) (Rotamase B) (S-cyclophilin) (SCYLP)
ruditapes_c5371	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (CYP-S1) (Cyclophilin B) (Rotamase B) (S-cyclophilin) (SCYLP)
ruditapes_c19923	positive regulation of translational termination	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (Hypusine-containing protein HP2) (eIF-4D)
ruditapes_c19923	positive regulation of translational termination	cell organization and biogenesis	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (Hypusine-containing protein HP2) (eIF-4D)
ruditapes_c19923	translational frameshifting	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (Hypusine-containing protein HP2) (eIF-4D)
ruditapes_c19923	peptidyl-lysine modification to hypusine	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (Hypusine-containing protein HP2) (eIF-4D)
ruditapes_c19923	positive regulation of translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (Hypusine-containing protein HP2) (eIF-4D)
ruditapes_c19923	translation	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (Hypusine-containing protein HP2) (eIF-4D)
ruditapes_c19923	translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (Hypusine-containing protein HP2) (eIF-4D)
ruditapes_c19923	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (Hypusine-containing protein HP2) (eIF-4D)
ruditapes_c19923	positive regulation of translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (Hypusine-containing protein HP2) (eIF-4D)
ruditapes_c19516	anion transport	transport	P	Anion exchange protein 3 (AE 3) (Anion exchanger 3) (Band 3-related protein 3) (B3RP-3) (Neuronal band 3-like protein) (Solute carrier family 4 member 3)
ruditapes_c19516	transport	transport	P	Anion exchange protein 3 (AE 3) (Anion exchanger 3) (Band 3-related protein 3) (B3RP-3) (Neuronal band 3-like protein) (Solute carrier family 4 member 3)
ruditapes2_lrc6098	ion transport	transport	P	Anion exchange protein 3 (AE 3) (Anion exchanger 3) (Band 3-related protein 3) (B3RP-3) (Neuronal band 3-like protein) (Solute carrier family 4 member 3)
ruditapes_c19516	ion transport	transport	P	Anion exchange protein 3 (AE 3) (Anion exchanger 3) (Band 3-related protein 3) (B3RP-3) (Neuronal band 3-like protein) (Solute carrier family 4 member 3)
ruditapes2_lrc6098	transport	transport	P	Anion exchange protein 3 (AE 3) (Anion exchanger 3) (Band 3-related protein 3) (B3RP-3) (Neuronal band 3-like protein) (Solute carrier family 4 member 3)
ruditapes2_lrc6098	anion transport	transport	P	Anion exchange protein 3 (AE 3) (Anion exchanger 3) (Band 3-related protein 3) (B3RP-3) (Neuronal band 3-like protein) (Solute carrier family 4 member 3)
ruditapes_c4802	metabolic process	other metabolic processes	P	"NAD-dependent malic enzyme, mitochondrial (NAD-ME) (EC 1.1.1.38) (Malic enzyme 2)"
ruditapes_c4802	malate metabolic process	other metabolic processes	P	"NAD-dependent malic enzyme, mitochondrial (NAD-ME) (EC 1.1.1.38) (Malic enzyme 2)"
ruditapes_c4802	oxidation reduction	other metabolic processes	P	"NAD-dependent malic enzyme, mitochondrial (NAD-ME) (EC 1.1.1.38) (Malic enzyme 2)"
ruditapes_c2928	malate metabolic process	other metabolic processes	P	"NAD-dependent malic enzyme, mitochondrial (NAD-ME) (EC 1.1.1.38) (Malic enzyme 2)"
ruditapes_c2928	metabolic process	other metabolic processes	P	"NAD-dependent malic enzyme, mitochondrial (NAD-ME) (EC 1.1.1.38) (Malic enzyme 2)"
ruditapes_c2928	oxidation reduction	other metabolic processes	P	"NAD-dependent malic enzyme, mitochondrial (NAD-ME) (EC 1.1.1.38) (Malic enzyme 2)"
ruditapes2_c2111	phosphorylation	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes2_c2111	lactose metabolic process	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes2_c2111	carbohydrate metabolic process	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes2_c2111	lactose catabolic process via tagatose-6-phosphate	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes_lrc33733	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes2_lrc6791	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes_lrc33919	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes2_lrc5302	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes_c33768	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes2_lrc4780	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes2_lrc4954	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes_lrc34105	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes_s38725	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes2_lrc5941	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes2_lrc5465	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes_lrc38631	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes_lrc34984	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes_lrc33291	translation	protein metabolism	P	40S ribosomal protein S20 (S22)
ruditapes_c14384	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase zeta (R-PTP-zeta) (EC 3.1.3.48) (Protein-tyrosine phosphatase receptor type Z polypeptide 1) (Protein-tyrosine phosphatase receptor type Z polypeptide 2) (R-PTP-zeta-2)
ruditapes_c14384	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase zeta (R-PTP-zeta) (EC 3.1.3.48) (Protein-tyrosine phosphatase receptor type Z polypeptide 1) (Protein-tyrosine phosphatase receptor type Z polypeptide 2) (R-PTP-zeta-2)
ruditapes_c14384	central nervous system development	developmental processes	P	Receptor-type tyrosine-protein phosphatase zeta (R-PTP-zeta) (EC 3.1.3.48) (Protein-tyrosine phosphatase receptor type Z polypeptide 1) (Protein-tyrosine phosphatase receptor type Z polypeptide 2) (R-PTP-zeta-2)
ruditapes_c14384	axonogenesis	developmental processes	P	Receptor-type tyrosine-protein phosphatase zeta (R-PTP-zeta) (EC 3.1.3.48) (Protein-tyrosine phosphatase receptor type Z polypeptide 1) (Protein-tyrosine phosphatase receptor type Z polypeptide 2) (R-PTP-zeta-2)
ruditapes_c14384	axonogenesis	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase zeta (R-PTP-zeta) (EC 3.1.3.48) (Protein-tyrosine phosphatase receptor type Z polypeptide 1) (Protein-tyrosine phosphatase receptor type Z polypeptide 2) (R-PTP-zeta-2)
ruditapes2_c2502	anion transport	transport	P	Band 3 anion transport protein (Anion exchange protein 1) (AE 1) (Anion exchanger 1) (Solute carrier family 4 member 1) (CD antigen CD233)
ruditapes2_c2502	transport	transport	P	Band 3 anion transport protein (Anion exchange protein 1) (AE 1) (Anion exchanger 1) (Solute carrier family 4 member 1) (CD antigen CD233)
ruditapes2_c2502	transmembrane ion transport	transport	P	Band 3 anion transport protein (Anion exchange protein 1) (AE 1) (Anion exchanger 1) (Solute carrier family 4 member 1) (CD antigen CD233)
ruditapes2_c2502	bicarbonate transport	transport	P	Band 3 anion transport protein (Anion exchange protein 1) (AE 1) (Anion exchanger 1) (Solute carrier family 4 member 1) (CD antigen CD233)
ruditapes2_c2502	ion transport	transport	P	Band 3 anion transport protein (Anion exchange protein 1) (AE 1) (Anion exchanger 1) (Solute carrier family 4 member 1) (CD antigen CD233)
ruditapes2_c2502	chloride transport	transport	P	Band 3 anion transport protein (Anion exchange protein 1) (AE 1) (Anion exchanger 1) (Solute carrier family 4 member 1) (CD antigen CD233)
ruditapes_c16276	blood coagulation	stress response	P	Achelase-2 (EC 3.4.21.-) (Achelase II)
ruditapes_c16276	proteolysis	protein metabolism	P	Achelase-2 (EC 3.4.21.-) (Achelase II)
ruditapes_c31096	sulfate transport	transport	P	Sulfate permease 2 (Sulfate permease II)
ruditapes_c31096	transmembrane transport	transport	P	Sulfate permease 2 (Sulfate permease II)
ruditapes_c31096	transport	transport	P	Sulfate permease 2 (Sulfate permease II)
ruditapes_c7728	endosome organization	cell organization and biogenesis	P	Neurogenic protein big brain
ruditapes_c7728	transport	transport	P	Neurogenic protein big brain
ruditapes_c7728	multicellular organismal development	developmental processes	P	Neurogenic protein big brain
ruditapes_c7728	endosomal lumen acidification	cell organization and biogenesis	P	Neurogenic protein big brain
ruditapes_c7728	cell-cell adhesion	cell adhesion	P	Neurogenic protein big brain
ruditapes_c7728	nervous system development	developmental processes	P	Neurogenic protein big brain
ruditapes_c7728	ectoderm development	developmental processes	P	Neurogenic protein big brain
ruditapes_c7728	ion transport	transport	P	Neurogenic protein big brain
ruditapes_c7728	mesoderm development	developmental processes	P	Neurogenic protein big brain
ruditapes_c7728	Notch signaling pathway	signal transduction	P	Neurogenic protein big brain
ruditapes_c7728	cell differentiation	other biological processes	P	Neurogenic protein big brain
ruditapes_c7728	transmembrane transport	transport	P	Neurogenic protein big brain
ruditapes_c7728	ovarian follicle cell development	other biological processes	P	Neurogenic protein big brain
ruditapes_c7728	water transport	transport	P	Neurogenic protein big brain
ruditapes_c26223	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase fused (EC 2.7.11.1)
ruditapes_c26223	germarium-derived egg chamber formation	other biological processes	P	Serine/threonine-protein kinase fused (EC 2.7.11.1)
ruditapes_c26223	multicellular organismal development	developmental processes	P	Serine/threonine-protein kinase fused (EC 2.7.11.1)
ruditapes_c26223	positive regulation of hh target transcription factor activity	signal transduction	P	Serine/threonine-protein kinase fused (EC 2.7.11.1)
ruditapes_c26223	positive regulation of hh target transcription factor activity	RNA metabolism	P	Serine/threonine-protein kinase fused (EC 2.7.11.1)
ruditapes_c26223	segment polarity determination	developmental processes	P	Serine/threonine-protein kinase fused (EC 2.7.11.1)
ruditapes_c26223	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase fused (EC 2.7.11.1)
ruditapes_c26223	positive regulation of transcription factor import into nucleus	transport	P	Serine/threonine-protein kinase fused (EC 2.7.11.1)
ruditapes_c26223	regulation of protein stability	protein metabolism	P	Serine/threonine-protein kinase fused (EC 2.7.11.1)
ruditapes_c26223	smoothened signaling pathway	signal transduction	P	Serine/threonine-protein kinase fused (EC 2.7.11.1)
ruditapes_c26223	regulation of proteolysis	protein metabolism	P	Serine/threonine-protein kinase fused (EC 2.7.11.1)
ruditapes2_c2022	central nervous system development	developmental processes	P	Neurotactin
ruditapes2_c2022	cell adhesion	cell adhesion	P	Neurotactin
ruditapes2_c2022	axon guidance	developmental processes	P	Neurotactin
ruditapes2_c2022	axon guidance	cell organization and biogenesis	P	Neurotactin
ruditapes2_c2022	axonogenesis	developmental processes	P	Neurotactin
ruditapes2_c2022	axonogenesis	cell organization and biogenesis	P	Neurotactin
ruditapes2_c2022	axonal fasciculation	developmental processes	P	Neurotactin
ruditapes2_c2022	axonal fasciculation	cell organization and biogenesis	P	Neurotactin
ruditapes_c4473	inflammatory response	stress response	P	Complement C3 (Fragment)
ruditapes_c4473	"complement activation, alternative pathway"	stress response	P	Complement C3 (Fragment)
ruditapes_c4473	"complement activation, alternative pathway"	protein metabolism	P	Complement C3 (Fragment)
ruditapes_c4473	innate immune response	stress response	P	Complement C3 (Fragment)
ruditapes_c4473	"complement activation, classical pathway"	stress response	P	Complement C3 (Fragment)
ruditapes_c4473	"complement activation, classical pathway"	protein metabolism	P	Complement C3 (Fragment)
ruditapes2_lrc4283	oxidation reduction	other metabolic processes	P	"NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (CI-31kD) (Complex I-30kD)"
ruditapes2_lrc4283	electron transport chain	other metabolic processes	P	"NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (CI-31kD) (Complex I-30kD)"
ruditapes2_lrc4283	transport	transport	P	"NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (CI-31kD) (Complex I-30kD)"
ruditapes_c20356	negative regulation of anti-apoptosis	death	P	Phosphatidylinositol 3-kinase regulatory subunit beta (PI3-kinase regulatory subunit beta) (PI3K regulatory subunit beta) (PtdIns-3-kinase regulatory subunit beta) (Phosphatidylinositol 3-kinase 85 kDa regulatory subunit beta) (PI3-kinase subunit p85-beta) (PtdIns-3-kinase regulatory subunit p85-beta)
ruditapes_c8605	signal transduction	signal transduction	P	Phosphatidylinositol 3-kinase regulatory subunit beta (PI3-kinase regulatory subunit beta) (PI3K regulatory subunit beta) (PtdIns-3-kinase regulatory subunit beta) (Phosphatidylinositol 3-kinase 85 kDa regulatory subunit beta) (PI3-kinase subunit p85-beta) (PtdIns-3-kinase regulatory subunit p85-beta)
ruditapes_c20356	signal transduction	signal transduction	P	Phosphatidylinositol 3-kinase regulatory subunit beta (PI3-kinase regulatory subunit beta) (PI3K regulatory subunit beta) (PtdIns-3-kinase regulatory subunit beta) (Phosphatidylinositol 3-kinase 85 kDa regulatory subunit beta) (PI3-kinase subunit p85-beta) (PtdIns-3-kinase regulatory subunit p85-beta)
ruditapes_c8605	negative regulation of anti-apoptosis	death	P	Phosphatidylinositol 3-kinase regulatory subunit beta (PI3-kinase regulatory subunit beta) (PI3K regulatory subunit beta) (PtdIns-3-kinase regulatory subunit beta) (Phosphatidylinositol 3-kinase 85 kDa regulatory subunit beta) (PI3-kinase subunit p85-beta) (PtdIns-3-kinase regulatory subunit p85-beta)
ruditapes_c29286	DNA restriction-modification system	DNA metabolism	P	Type-2 restriction enzyme Sau96I (R.Sau96I) (EC 3.1.21.4) (Endonuclease Sau96I) (Type II restriction enzyme Sau96I)
ruditapes_c16287	charged-tRNA amino acid modification	protein metabolism	P	tRNA A64-2'-O-ribosylphosphate transferase (EC 2.4.2.-) (Initiator tRNA phosphoribosyl-transferase)
ruditapes_c16287	charged-tRNA amino acid modification	RNA metabolism	P	tRNA A64-2'-O-ribosylphosphate transferase (EC 2.4.2.-) (Initiator tRNA phosphoribosyl-transferase)
ruditapes_c16287	tRNA processing	RNA metabolism	P	tRNA A64-2'-O-ribosylphosphate transferase (EC 2.4.2.-) (Initiator tRNA phosphoribosyl-transferase)
ruditapes_c20241	"negative regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	"negative regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	protein localization in nucleus	other biological processes	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	protein complex assembly	cell organization and biogenesis	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	negative regulation of apoptosis	death	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	traversing start control point of mitotic cell cycle	cell cycle and proliferation	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	establishment of protein localization	other biological processes	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	protein destabilization	protein metabolism	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	positive regulation of cell cycle	cell cycle and proliferation	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	response to antibiotic	other biological processes	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	regulation of protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_c20241	positive regulation of mitotic cell cycle	cell cycle and proliferation	P	E3 ubiquitin-protein ligase Mdm2 (EC 6.3.2.-) (Double minute 2 protein) (Oncoprotein Mdm2) (p53-binding protein Mdm2)
ruditapes_lrc33510	cytolysis	death	P	Bacteriocin lactocin-S
ruditapes_lrc33510	defense response to bacterium	stress response	P	Bacteriocin lactocin-S
ruditapes_c9174	proteolysis	protein metabolism	P	Tail-specific protease (EC 3.4.21.102) (C-terminal-processing peptidase) (PRC protein) (Protease Re)
ruditapes_c9174	protein catabolic process	protein metabolism	P	Tail-specific protease (EC 3.4.21.102) (C-terminal-processing peptidase) (PRC protein) (Protease Re)
ruditapes_s39403	cell division	other biological processes	P	Serine/threonine-protein phosphatase PP1-2 (EC 3.1.3.16) (Suppressor protein SDS21)
ruditapes_s39403	mitosis	cell cycle and proliferation	P	Serine/threonine-protein phosphatase PP1-2 (EC 3.1.3.16) (Suppressor protein SDS21)
ruditapes_s39403	mitosis	cell organization and biogenesis	P	Serine/threonine-protein phosphatase PP1-2 (EC 3.1.3.16) (Suppressor protein SDS21)
ruditapes_s39403	microtubule cytoskeleton organization	cell organization and biogenesis	P	Serine/threonine-protein phosphatase PP1-2 (EC 3.1.3.16) (Suppressor protein SDS21)
ruditapes_s39403	rRNA processing	RNA metabolism	P	Serine/threonine-protein phosphatase PP1-2 (EC 3.1.3.16) (Suppressor protein SDS21)
ruditapes_s39403	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein phosphatase PP1-2 (EC 3.1.3.16) (Suppressor protein SDS21)
ruditapes_s38265	protein amino acid phosphorylation	protein metabolism	P	Heat-stable enterotoxin receptor (STA receptor) (EC 4.6.1.2) (Guanylyl cyclase C) (GC-C) (Intestinal guanylate cyclase)
ruditapes_s38265	response to toxin	other biological processes	P	Heat-stable enterotoxin receptor (STA receptor) (EC 4.6.1.2) (Guanylyl cyclase C) (GC-C) (Intestinal guanylate cyclase)
ruditapes_s38265	cyclic nucleotide biosynthetic process	other metabolic processes	P	Heat-stable enterotoxin receptor (STA receptor) (EC 4.6.1.2) (Guanylyl cyclase C) (GC-C) (Intestinal guanylate cyclase)
ruditapes_s38265	cGMP biosynthetic process	other metabolic processes	P	Heat-stable enterotoxin receptor (STA receptor) (EC 4.6.1.2) (Guanylyl cyclase C) (GC-C) (Intestinal guanylate cyclase)
ruditapes_s38265	regulation of cell proliferation	cell cycle and proliferation	P	Heat-stable enterotoxin receptor (STA receptor) (EC 4.6.1.2) (Guanylyl cyclase C) (GC-C) (Intestinal guanylate cyclase)
ruditapes_c20686	carbohydrate metabolic process	other metabolic processes	P	"Glucan endo-1,3-beta-glucosidase A1 (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase A1)"
ruditapes_c20686	cell wall organization	cell organization and biogenesis	P	"Glucan endo-1,3-beta-glucosidase A1 (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase A1)"
ruditapes_c20686	metabolic process	other metabolic processes	P	"Glucan endo-1,3-beta-glucosidase A1 (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase A1)"
ruditapes_lrc34066	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (Complex I subunit B13) (Complex I-13kD-B) (CI-13kD-B) (NADH-ubiquinone oxidoreductase 13 kDa-B subunit)
ruditapes_lrc34066	respiratory electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (Complex I subunit B13) (Complex I-13kD-B) (CI-13kD-B) (NADH-ubiquinone oxidoreductase 13 kDa-B subunit)
ruditapes_lrc34066	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (Complex I subunit B13) (Complex I-13kD-B) (CI-13kD-B) (NADH-ubiquinone oxidoreductase 13 kDa-B subunit)
ruditapes_c1195	ion transport	transport	P	V-type proton ATPase 16 kDa proteolipid subunit (V-ATPase 16 kDa proteolipid subunit) (Vacuolar proton pump 16 kDa proteolipid subunit)
ruditapes_c1195	transport	transport	P	V-type proton ATPase 16 kDa proteolipid subunit (V-ATPase 16 kDa proteolipid subunit) (Vacuolar proton pump 16 kDa proteolipid subunit)
ruditapes_c1195	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase 16 kDa proteolipid subunit (V-ATPase 16 kDa proteolipid subunit) (Vacuolar proton pump 16 kDa proteolipid subunit)
ruditapes_c1195	proton transport	transport	P	V-type proton ATPase 16 kDa proteolipid subunit (V-ATPase 16 kDa proteolipid subunit) (Vacuolar proton pump 16 kDa proteolipid subunit)
ruditapes_c20502	menaquinone biosynthetic process	other metabolic processes	P	Putative esterase YtxM (EC 3.1.-.-)
ruditapes_c9552	transport	transport	P	Sodium-dependent noradrenaline transporter (Norepinephrine transporter) (NET) (Solute carrier family 6 member 2)
ruditapes_c9552	neurotransmitter transport	transport	P	Sodium-dependent noradrenaline transporter (Norepinephrine transporter) (NET) (Solute carrier family 6 member 2)
ruditapes_c9552	monoamine transport	transport	P	Sodium-dependent noradrenaline transporter (Norepinephrine transporter) (NET) (Solute carrier family 6 member 2)
ruditapes_c9552	transmembrane transport	transport	P	Sodium-dependent noradrenaline transporter (Norepinephrine transporter) (NET) (Solute carrier family 6 member 2)
ruditapes_c9552	synaptic transmission	cell-cell signaling	P	Sodium-dependent noradrenaline transporter (Norepinephrine transporter) (NET) (Solute carrier family 6 member 2)
ruditapes2_lrc5510	mesodermal cell migration	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	salivary gland boundary specification	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	gut mesoderm development	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	nervous system development	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	axon midline choice point recognition	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	axon midline choice point recognition	cell organization and biogenesis	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	mesoderm migration	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	cell differentiation	other biological processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	"epithelial cell migration, open tracheal system"	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	induction of negative chemotaxis	other biological processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	embryonic heart tube development	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	positive regulation of cell-cell adhesion	cell adhesion	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	dendrite morphogenesis	cell organization and biogenesis	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	regulation of epithelial cell migration	other biological processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	gonad development	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	glial cell migration	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	neuron migration	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	neuron differentiation	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	axon guidance	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	axon guidance	cell organization and biogenesis	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	multicellular organismal development	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_lrc5510	dendrite morphogenesis	developmental processes	P	Protein slit (dSlit) [Cleaved into: Protein slit N-product; Protein slit C-product]
ruditapes2_c1602	muscle organ development	developmental processes	P	Laminin subunit alpha-2 (Laminin M chain) (Laminin-12 subunit alpha) (Laminin-2 subunit alpha) (Laminin-4 subunit alpha) (Merosin heavy chain)
ruditapes2_c1602	"positive regulation of synaptic transmission, cholinergic"	cell-cell signaling	P	Laminin subunit alpha-2 (Laminin M chain) (Laminin-12 subunit alpha) (Laminin-2 subunit alpha) (Laminin-4 subunit alpha) (Merosin heavy chain)
ruditapes2_c1602	cell adhesion	cell adhesion	P	Laminin subunit alpha-2 (Laminin M chain) (Laminin-12 subunit alpha) (Laminin-2 subunit alpha) (Laminin-4 subunit alpha) (Merosin heavy chain)
ruditapes2_c1602	regulation of cell adhesion	cell adhesion	P	Laminin subunit alpha-2 (Laminin M chain) (Laminin-12 subunit alpha) (Laminin-2 subunit alpha) (Laminin-4 subunit alpha) (Merosin heavy chain)
ruditapes2_c1602	regulation of cell migration	other biological processes	P	Laminin subunit alpha-2 (Laminin M chain) (Laminin-12 subunit alpha) (Laminin-2 subunit alpha) (Laminin-4 subunit alpha) (Merosin heavy chain)
ruditapes2_c1602	regulation of embryonic development	developmental processes	P	Laminin subunit alpha-2 (Laminin M chain) (Laminin-12 subunit alpha) (Laminin-2 subunit alpha) (Laminin-4 subunit alpha) (Merosin heavy chain)
ruditapes2_c5530	translation	protein metabolism	P	60S ribosomal protein L17 (Amino acid starvation-induced protein) (ASI) (L23)
ruditapes_lrc38315	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc37417	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc38711	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc35175	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc38315	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc34773	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc34427	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc34744	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_s36897	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc35175	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_s38599	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc34427	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_s36897	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc35078	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc38711	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc37417	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_c4558	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc35078	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc35855	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_s36897	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc34773	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc38711	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc35855	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc38315	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc34744	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc35855	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc35175	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_c4558	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc34427	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_c4558	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc34744	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc35078	electron transport chain	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc37417	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_s38599	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_lrc34773	transport	transport	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_s38599	nitrogen fixation	other metabolic processes	P	Cytochrome c-552 (Cytochrome c552)
ruditapes_c17689	transport	transport	P	Acriflavine resistance protein F (Protein EnvD)
ruditapes_c17689	cell division	other biological processes	P	Acriflavine resistance protein F (Protein EnvD)
ruditapes_c17689	cell cycle	cell cycle and proliferation	P	Acriflavine resistance protein F (Protein EnvD)
ruditapes_lrc22863	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc1987	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc3867	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4152	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc6880	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc24138	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc1647	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc29818	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc24060	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc16116	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc1603	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc3956	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc3779	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4134	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc27015	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4147	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc31028	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc26060	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4178	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc27015	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc26157	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc29873	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc20616	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc27360	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4223	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc16102	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4128	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc17281	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4366	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_s35988	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc14795	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc3779	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4280	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4006	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc25844	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc3867	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc22863	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc16892	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc25673	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc1987	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc3420	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc15397	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc29818	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc6880	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4199	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc16116	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4178	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc24060	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc20616	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4134	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc3956	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc15397	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc1603	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4147	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc26060	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc1647	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc14795	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc24138	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc31028	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4128	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc17281	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc29873	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4223	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4280	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc27360	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc25844	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc16892	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4199	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4366	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_s35988	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc26157	DNA recombination	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4152	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc16102	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc3420	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_lrc25673	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes2_lrc4006	DNA integration	DNA metabolism	P	Prophage DLP12 integrase (Prophage QSR' integrase)
ruditapes_c12435	viral genome replication	other biological processes	P	ATP-dependent DNA helicase P143 (EC 3.6.4.12)
ruditapes_c12435	DNA replication	DNA metabolism	P	ATP-dependent DNA helicase P143 (EC 3.6.4.12)
ruditapes_c28447	multicellular organismal development	developmental processes	P	Stromelysin-3 (SL-3) (ST3) (EC 3.4.24.-) (Matrix metalloproteinase-11) (MMP-11)
ruditapes_c28447	collagen catabolic process	other metabolic processes	P	Stromelysin-3 (SL-3) (ST3) (EC 3.4.24.-) (Matrix metalloproteinase-11) (MMP-11)
ruditapes_c28447	proteolysis	protein metabolism	P	Stromelysin-3 (SL-3) (ST3) (EC 3.4.24.-) (Matrix metalloproteinase-11) (MMP-11)
ruditapes2_c736	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (Cyclophilin B) (Rotamase B) (S-cyclophilin) (SCYLP)
ruditapes_c4268	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (Cyclophilin B) (Rotamase B) (S-cyclophilin) (SCYLP)
ruditapes_c4268	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (Cyclophilin B) (Rotamase B) (S-cyclophilin) (SCYLP)
ruditapes2_c736	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (Cyclophilin B) (Rotamase B) (S-cyclophilin) (SCYLP)
ruditapes_c26657	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-9A
ruditapes_c26657	GTP catabolic process	other metabolic processes	P	Ras-related protein Rab-9A
ruditapes_c26657	protein transport	transport	P	Ras-related protein Rab-9A
ruditapes_c26657	positive regulation of exocytosis	transport	P	Ras-related protein Rab-9A
ruditapes_c26657	transport	transport	P	Ras-related protein Rab-9A
ruditapes_c21668	transmembrane transport	transport	P	"Probable aquaporin TIP-type RB7-18C (RT-TIP) (TobRB7) (Tonoplast intrinsic protein, root-specific RB7-18C)"
ruditapes_c21668	water transport	transport	P	"Probable aquaporin TIP-type RB7-18C (RT-TIP) (TobRB7) (Tonoplast intrinsic protein, root-specific RB7-18C)"
ruditapes_c21668	transport	transport	P	"Probable aquaporin TIP-type RB7-18C (RT-TIP) (TobRB7) (Tonoplast intrinsic protein, root-specific RB7-18C)"
ruditapes_lrc15579	pathogenesis	other biological processes	P	Protein U54
ruditapes_c2553	lipid catabolic process	other metabolic processes	P	Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase)
ruditapes_c2553	metabolic process	other metabolic processes	P	Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase)
ruditapes_c2554	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-2 (EC 3.4.25.1) (Macropain subunit C3) (Multicatalytic endopeptidase complex subunit C3) (xC3) (Proteasome component C3)
ruditapes_c2554	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-2 (EC 3.4.25.1) (Macropain subunit C3) (Multicatalytic endopeptidase complex subunit C3) (xC3) (Proteasome component C3)
ruditapes_c2554	proteolysis	protein metabolism	P	Proteasome subunit alpha type-2 (EC 3.4.25.1) (Macropain subunit C3) (Multicatalytic endopeptidase complex subunit C3) (xC3) (Proteasome component C3)
ruditapes_c31563	response to stress	stress response	P	Growth arrest and DNA damage-inducible protein GADD45 alpha (DNA damage-inducible transcript 1 protein) (DDIT-1)
ruditapes_c31563	regulation of cell cycle	cell cycle and proliferation	P	Growth arrest and DNA damage-inducible protein GADD45 alpha (DNA damage-inducible transcript 1 protein) (DDIT-1)
ruditapes_c31563	response to DNA damage stimulus	stress response	P	Growth arrest and DNA damage-inducible protein GADD45 alpha (DNA damage-inducible transcript 1 protein) (DDIT-1)
ruditapes_c31563	cell cycle	cell cycle and proliferation	P	Growth arrest and DNA damage-inducible protein GADD45 alpha (DNA damage-inducible transcript 1 protein) (DDIT-1)
ruditapes_c31563	cell cycle arrest	cell cycle and proliferation	P	Growth arrest and DNA damage-inducible protein GADD45 alpha (DNA damage-inducible transcript 1 protein) (DDIT-1)
ruditapes_c25771	transport	transport	P	Degenerin deg-1 (Degeneration of certain neurons protein 1)
ruditapes_c25771	response to amino acid stimulus	other biological processes	P	Degenerin deg-1 (Degeneration of certain neurons protein 1)
ruditapes_c25771	response to acid	other biological processes	P	Degenerin deg-1 (Degeneration of certain neurons protein 1)
ruditapes_c25771	cell death	death	P	Degenerin deg-1 (Degeneration of certain neurons protein 1)
ruditapes_c25771	ion transport	transport	P	Degenerin deg-1 (Degeneration of certain neurons protein 1)
ruditapes_c25771	sodium ion transport	transport	P	Degenerin deg-1 (Degeneration of certain neurons protein 1)
ruditapes_c15983	microtubule-based process	other biological processes	P	Tubulin alpha-2 chain
ruditapes_c15983	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-2 chain
ruditapes_c15983	GTP catabolic process	other metabolic processes	P	Tubulin alpha-2 chain
ruditapes_c15983	microtubule-based movement	other biological processes	P	Tubulin alpha-2 chain
ruditapes2_lrc3597	viral envelope fusion with host membrane	cell organization and biogenesis	P	Protein A26
ruditapes_c16592	potassium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-2 (Na(+)/K(+) ATPase alpha-2 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-2)
ruditapes_c16592	cation transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-2 (Na(+)/K(+) ATPase alpha-2 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-2)
ruditapes_c16592	regulation of striated muscle contraction	other biological processes	P	Sodium/potassium-transporting ATPase subunit alpha-2 (Na(+)/K(+) ATPase alpha-2 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-2)
ruditapes_c16592	sodium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-2 (Na(+)/K(+) ATPase alpha-2 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-2)
ruditapes_c16592	transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-2 (Na(+)/K(+) ATPase alpha-2 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-2)
ruditapes_c16592	neurotransmitter uptake	cell-cell signaling	P	Sodium/potassium-transporting ATPase subunit alpha-2 (Na(+)/K(+) ATPase alpha-2 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-2)
ruditapes_c16592	monovalent inorganic cation transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-2 (Na(+)/K(+) ATPase alpha-2 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-2)
ruditapes_c16592	ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-2 (Na(+)/K(+) ATPase alpha-2 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-2)
ruditapes_c16592	ATP biosynthetic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit alpha-2 (Na(+)/K(+) ATPase alpha-2 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-2)
ruditapes_c16592	metabolic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit alpha-2 (Na(+)/K(+) ATPase alpha-2 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-2)
ruditapes_c16592	neurotransmitter uptake	transport	P	Sodium/potassium-transporting ATPase subunit alpha-2 (Na(+)/K(+) ATPase alpha-2 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-2)
ruditapes_c21430	response to wounding	stress response	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c21430	axon regeneration in the peripheral nervous system	stress response	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	neuromuscular junction development	developmental processes	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	neuromuscular junction development	cell organization and biogenesis	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c21430	neuromuscular junction development	developmental processes	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c21430	neuromuscular junction development	cell organization and biogenesis	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	mesenchymal-epithelial cell signaling involved in prostate gland development	cell-cell signaling	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c21430	positive regulation of cell proliferation	cell cycle and proliferation	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	positive regulation of cell proliferation	cell cycle and proliferation	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	positive regulation of gene expression	other metabolic processes	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	cell adhesion	cell adhesion	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	mesenchymal-epithelial cell signaling involved in prostate gland development	developmental processes	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	axon regeneration in the peripheral nervous system	stress response	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	axon regeneration in the peripheral nervous system	developmental processes	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	axon regeneration in the peripheral nervous system	cell organization and biogenesis	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	response to wounding	stress response	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c21430	positive regulation of gene expression	other metabolic processes	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c21430	cell adhesion	cell adhesion	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c21430	signal transduction	signal transduction	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c21430	mesenchymal-epithelial cell signaling involved in prostate gland development	developmental processes	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c21430	mesenchymal-epithelial cell signaling involved in prostate gland development	cell-cell signaling	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c21430	axon regeneration in the peripheral nervous system	developmental processes	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c21430	axon regeneration in the peripheral nervous system	cell organization and biogenesis	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c24036	signal transduction	signal transduction	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (Tenascin-C) (TN-C)
ruditapes_c38066	metabolic process	other metabolic processes	P	Intestinal-type alkaline phosphatase (IAP) (Intestinal alkaline phosphatase) (EC 3.1.3.1) (Alkaline phosphatase 3)
ruditapes_c38066	dephosphorylation	other metabolic processes	P	Intestinal-type alkaline phosphatase (IAP) (Intestinal alkaline phosphatase) (EC 3.1.3.1) (Alkaline phosphatase 3)
ruditapes_c20931	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	G2/mitotic-specific cyclin-A
ruditapes_c20931	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	G2/mitotic-specific cyclin-A
ruditapes_c20931	cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-A
ruditapes_c20931	regulation of G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-A
ruditapes_c20931	mitosis	cell cycle and proliferation	P	G2/mitotic-specific cyclin-A
ruditapes_c20931	mitosis	cell organization and biogenesis	P	G2/mitotic-specific cyclin-A
ruditapes_c20931	cell division	other biological processes	P	G2/mitotic-specific cyclin-A
ruditapes_c20931	regulation of cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-A
ruditapes_c23297	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein B (gB) (gB-2) (gB2)
ruditapes_s40207	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c368	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_s40207	autophagic cell death	death	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c368	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c368	autophagic cell death	death	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_s40207	salivary gland cell autophagic cell death	developmental processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c3229	salivary gland cell autophagic cell death	developmental processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c3229	salivary gland cell autophagic cell death	death	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c3229	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc35144	salivary gland cell autophagic cell death	death	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_s40207	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c3229	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc35144	autophagic cell death	death	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc35144	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_s40207	salivary gland cell autophagic cell death	death	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c3229	autophagic cell death	death	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c368	salivary gland cell autophagic cell death	developmental processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c368	salivary gland cell autophagic cell death	death	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc35144	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc35144	salivary gland cell autophagic cell death	developmental processes	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_c7106	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Thiaminase-2 (EC 3.5.99.2) (Thiaminase II) (Transcriptional activator TenA)
ruditapes_c7106	"transcription, DNA-dependent"	RNA metabolism	P	Thiaminase-2 (EC 3.5.99.2) (Thiaminase II) (Transcriptional activator TenA)
ruditapes_c7106	thiamin catabolic process	other metabolic processes	P	Thiaminase-2 (EC 3.5.99.2) (Thiaminase II) (Transcriptional activator TenA)
ruditapes_c31830	metabolic process	other metabolic processes	P	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase (IN)]
ruditapes_c31830	DNA recombination	DNA metabolism	P	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase (IN)]
ruditapes_c31830	RNA-dependent DNA replication	DNA metabolism	P	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase (IN)]
ruditapes_c31830	DNA integration	DNA metabolism	P	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4); Integrase (IN)]
ruditapes_c23097	epithelial cell proliferation	cell cycle and proliferation	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c17945	extracellular matrix organization	cell organization and biogenesis	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c20202	cell-cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c19240	camera-type eye morphogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c10488	cell-cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c16054	camera-type eye morphogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c23097	cell-cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c17945	cell-cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c16054	extracellular matrix organization	cell organization and biogenesis	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c10488	extracellular matrix organization	cell organization and biogenesis	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c20202	cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c19240	cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c27556	epithelial cell proliferation	cell cycle and proliferation	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c23097	extracellular matrix organization	cell organization and biogenesis	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c16054	cell-cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c27556	camera-type eye morphogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c16054	epithelial cell proliferation	cell cycle and proliferation	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c27556	cell-cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c27556	extracellular matrix organization	cell organization and biogenesis	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c20202	angiogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c19240	angiogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c17945	cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c19240	cell-cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c10488	cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c17945	epithelial cell proliferation	cell cycle and proliferation	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c17945	angiogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c10488	angiogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c16054	cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c27556	angiogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c20202	extracellular matrix organization	cell organization and biogenesis	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c19240	extracellular matrix organization	cell organization and biogenesis	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c10488	epithelial cell proliferation	cell cycle and proliferation	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c19240	epithelial cell proliferation	cell cycle and proliferation	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c23097	camera-type eye morphogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c20202	camera-type eye morphogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c17945	camera-type eye morphogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c16054	angiogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c10488	camera-type eye morphogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c20202	epithelial cell proliferation	cell cycle and proliferation	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c23097	angiogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c27556	cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c23097	cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c3592	pathogenesis	other biological processes	P	Glycoprotein gp2 (Glycoprotein X) (GpX) (Fragment)
ruditapes_c3592	viral reproduction	other biological processes	P	Glycoprotein gp2 (Glycoprotein X) (GpX) (Fragment)
ruditapes_s35474	chemotaxis	other biological processes	P	N-formyl peptide receptor 2 (FMLP-related receptor I) (FMLP-R-I) (Formyl peptide receptor-like 1) (HM63) (Lipoxin A4 receptor) (LXA4 receptor) (RFP)
ruditapes_s35474	G-protein coupled receptor protein signaling pathway	signal transduction	P	N-formyl peptide receptor 2 (FMLP-related receptor I) (FMLP-R-I) (Formyl peptide receptor-like 1) (HM63) (Lipoxin A4 receptor) (LXA4 receptor) (RFP)
ruditapes_s35474	cell adhesion	cell adhesion	P	N-formyl peptide receptor 2 (FMLP-related receptor I) (FMLP-R-I) (Formyl peptide receptor-like 1) (HM63) (Lipoxin A4 receptor) (LXA4 receptor) (RFP)
ruditapes_s35474	cell motion	other biological processes	P	N-formyl peptide receptor 2 (FMLP-related receptor I) (FMLP-R-I) (Formyl peptide receptor-like 1) (HM63) (Lipoxin A4 receptor) (LXA4 receptor) (RFP)
ruditapes_s35474	inflammatory response	stress response	P	N-formyl peptide receptor 2 (FMLP-related receptor I) (FMLP-R-I) (Formyl peptide receptor-like 1) (HM63) (Lipoxin A4 receptor) (LXA4 receptor) (RFP)
ruditapes_s35474	signal transduction	signal transduction	P	N-formyl peptide receptor 2 (FMLP-related receptor I) (FMLP-R-I) (Formyl peptide receptor-like 1) (HM63) (Lipoxin A4 receptor) (LXA4 receptor) (RFP)
ruditapes_c25190	signal transduction	signal transduction	P	C-X-C chemokine receptor type 7 (CXC-R7) (CXCR-7) (Chemokine orphan receptor 1) (G-protein coupled receptor 159) (G-protein coupled receptor RDC1 homolog) (RDC-1)
ruditapes_c25190	negative regulation of apoptosis	death	P	C-X-C chemokine receptor type 7 (CXC-R7) (CXCR-7) (Chemokine orphan receptor 1) (G-protein coupled receptor 159) (G-protein coupled receptor RDC1 homolog) (RDC-1)
ruditapes_c25190	cell adhesion	cell adhesion	P	C-X-C chemokine receptor type 7 (CXC-R7) (CXCR-7) (Chemokine orphan receptor 1) (G-protein coupled receptor 159) (G-protein coupled receptor RDC1 homolog) (RDC-1)
ruditapes_c25190	G-protein coupled receptor protein signaling pathway	signal transduction	P	C-X-C chemokine receptor type 7 (CXC-R7) (CXCR-7) (Chemokine orphan receptor 1) (G-protein coupled receptor 159) (G-protein coupled receptor RDC1 homolog) (RDC-1)
ruditapes_c25190	interspecies interaction between organisms	other biological processes	P	C-X-C chemokine receptor type 7 (CXC-R7) (CXCR-7) (Chemokine orphan receptor 1) (G-protein coupled receptor 159) (G-protein coupled receptor RDC1 homolog) (RDC-1)
ruditapes_c25190	multicellular organismal development	developmental processes	P	C-X-C chemokine receptor type 7 (CXC-R7) (CXCR-7) (Chemokine orphan receptor 1) (G-protein coupled receptor 159) (G-protein coupled receptor RDC1 homolog) (RDC-1)
ruditapes_c25190	chemokine-mediated signaling pathway	signal transduction	P	C-X-C chemokine receptor type 7 (CXC-R7) (CXCR-7) (Chemokine orphan receptor 1) (G-protein coupled receptor 159) (G-protein coupled receptor RDC1 homolog) (RDC-1)
ruditapes_c14765	transport	transport	P	Potassium voltage-gated channel subfamily C member 1 (NGK2) (RAW2) (Voltage-gated potassium channel subunit Kv3.1) (Voltage-gated potassium channel subunit Kv4)
ruditapes_c14765	potassium ion transport	transport	P	Potassium voltage-gated channel subfamily C member 1 (NGK2) (RAW2) (Voltage-gated potassium channel subunit Kv3.1) (Voltage-gated potassium channel subunit Kv4)
ruditapes_c14765	transmembrane transport	transport	P	Potassium voltage-gated channel subfamily C member 1 (NGK2) (RAW2) (Voltage-gated potassium channel subunit Kv3.1) (Voltage-gated potassium channel subunit Kv4)
ruditapes_c14765	regulation of transmembrane ion transport	transport	P	Potassium voltage-gated channel subfamily C member 1 (NGK2) (RAW2) (Voltage-gated potassium channel subunit Kv3.1) (Voltage-gated potassium channel subunit Kv4)
ruditapes_c14765	ion transport	transport	P	Potassium voltage-gated channel subfamily C member 1 (NGK2) (RAW2) (Voltage-gated potassium channel subunit Kv3.1) (Voltage-gated potassium channel subunit Kv4)
ruditapes_c12514	mitotic spindle organization	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	mitotic spindle organization	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	centrosome organization	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	centrosome separation	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	centrosome separation	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	"negative regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	"negative regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	protein ubiquitination	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	response to DNA damage stimulus	stress response	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	signal transduction	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	stress response	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	death	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	DNA repair	stress response	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12514	DNA repair	DNA metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c22070	DNA methylation	DNA metabolism	P	Modification methylase KpnI (M.KpnI) (EC 2.1.1.72) (Adenine-specific methyltransferase KpnI)
ruditapes_c22070	methylation	other metabolic processes	P	Modification methylase KpnI (M.KpnI) (EC 2.1.1.72) (Adenine-specific methyltransferase KpnI)
ruditapes_c22070	DNA restriction-modification system	DNA metabolism	P	Modification methylase KpnI (M.KpnI) (EC 2.1.1.72) (Adenine-specific methyltransferase KpnI)
ruditapes_c22070	DNA methylation on adenine	DNA metabolism	P	Modification methylase KpnI (M.KpnI) (EC 2.1.1.72) (Adenine-specific methyltransferase KpnI)
ruditapes_c17702	DNA restriction-modification system	DNA metabolism	P	Type-2 restriction enzyme HgiEI (R.HgiEI) (EC 3.1.21.4) (Endonuclease HgiEI) (Type II restriction enzyme HgiEI)
ruditapes_c1129	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc33170	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	regulation of protein amino acid phosphorylation	protein metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7247	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_lrc35124	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c4994	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c3170	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	synaptogenesis	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c1129	synaptogenesis	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_lrc6012	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c19962	branched chain family amino acid biosynthetic process	other metabolic processes	P	"Threonine dehydratase biosynthetic, chloroplastic (EC 4.3.1.19) (Threonine deaminase) (TD)"
ruditapes_c19962	isoleucine biosynthetic process	other metabolic processes	P	"Threonine dehydratase biosynthetic, chloroplastic (EC 4.3.1.19) (Threonine deaminase) (TD)"
ruditapes_c19962	metabolic process	other metabolic processes	P	"Threonine dehydratase biosynthetic, chloroplastic (EC 4.3.1.19) (Threonine deaminase) (TD)"
ruditapes_c19962	cellular amino acid metabolic process	other metabolic processes	P	"Threonine dehydratase biosynthetic, chloroplastic (EC 4.3.1.19) (Threonine deaminase) (TD)"
ruditapes_c19962	cellular amino acid biosynthetic process	other metabolic processes	P	"Threonine dehydratase biosynthetic, chloroplastic (EC 4.3.1.19) (Threonine deaminase) (TD)"
ruditapes_c10587	epithelial cell proliferation	cell cycle and proliferation	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c9175	cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c9175	angiogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c10587	cell adhesion	cell adhesion	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c9175	camera-type eye morphogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c9175	epithelial cell proliferation	cell cycle and proliferation	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c10587	angiogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c10587	camera-type eye morphogenesis	developmental processes	P	Collagen alpha-2(VIII) chain (Endothelial collagen)
ruditapes_c16649	rRNA transport	transport	P	Thiosulfate sulfurtransferase (EC 2.8.1.1) (Rhodanese)
ruditapes_c16967	rRNA transport	transport	P	Thiosulfate sulfurtransferase (EC 2.8.1.1) (Rhodanese)
ruditapes_c29695	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase HAL4/SAT4 (EC 2.7.11.1) (Halotolerance protein 4)
ruditapes_c29695	cellular cation homeostasis	other biological processes	P	Serine/threonine-protein kinase HAL4/SAT4 (EC 2.7.11.1) (Halotolerance protein 4)
ruditapes_c29695	protein amino acid dephosphorylation	protein metabolism	P	Serine/threonine-protein kinase HAL4/SAT4 (EC 2.7.11.1) (Halotolerance protein 4)
ruditapes_c29695	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase HAL4/SAT4 (EC 2.7.11.1) (Halotolerance protein 4)
ruditapes_c29695	cellular protein localization	other biological processes	P	Serine/threonine-protein kinase HAL4/SAT4 (EC 2.7.11.1) (Halotolerance protein 4)
ruditapes_c10253	transport	transport	P	Intracellular protein transport protein USO1 (Int-1)
ruditapes_c10253	protein transport	transport	P	Intracellular protein transport protein USO1 (Int-1)
ruditapes_c10253	Golgi vesicle transport	transport	P	Intracellular protein transport protein USO1 (Int-1)
ruditapes_c10253	vesicle fusion with Golgi apparatus	transport	P	Intracellular protein transport protein USO1 (Int-1)
ruditapes_c10253	vesicle fusion with Golgi apparatus	cell organization and biogenesis	P	Intracellular protein transport protein USO1 (Int-1)
ruditapes_c10253	ER to Golgi vesicle-mediated transport	transport	P	Intracellular protein transport protein USO1 (Int-1)
ruditapes_c10253	Golgi vesicle docking	transport	P	Intracellular protein transport protein USO1 (Int-1)
ruditapes_c10253	intracellular protein transport	transport	P	Intracellular protein transport protein USO1 (Int-1)
ruditapes_c24146	response to tellurium ion	other biological processes	P	Tellurite methyltransferase (EC 2.1.1.265) (Chalcogen-detoxifying protein TehB) (Selenite methyltransferase) (Tellurite resistance protein TehB)
ruditapes_c24146	response to antibiotic	other biological processes	P	Tellurite methyltransferase (EC 2.1.1.265) (Chalcogen-detoxifying protein TehB) (Selenite methyltransferase) (Tellurite resistance protein TehB)
ruditapes_c24146	methylation	other metabolic processes	P	Tellurite methyltransferase (EC 2.1.1.265) (Chalcogen-detoxifying protein TehB) (Selenite methyltransferase) (Tellurite resistance protein TehB)
ruditapes_c19041	neuropeptide signaling pathway	signal transduction	P	Protachykinin (Gamma-preprotachykinin) (Gamma-PPT) [Cleaved into: Substance P (SP); Neuropeptide gamma (Carassin); Neurokinin A (NKA); C-terminal-flanking peptide]
ruditapes_c19041	tachykinin receptor signaling pathway	signal transduction	P	Protachykinin (Gamma-preprotachykinin) (Gamma-PPT) [Cleaved into: Substance P (SP); Neuropeptide gamma (Carassin); Neurokinin A (NKA); C-terminal-flanking peptide]
ruditapes_c19041	synaptic transmission	cell-cell signaling	P	Protachykinin (Gamma-preprotachykinin) (Gamma-PPT) [Cleaved into: Substance P (SP); Neuropeptide gamma (Carassin); Neurokinin A (NKA); C-terminal-flanking peptide]
ruditapes_c4293	metabolic process	other metabolic processes	P	Arylsulfatase (AS) (EC 3.1.6.1) (Aryl-sulfate sulphohydrolase)
ruditapes_c16658	L-fucose catabolic process	other metabolic processes	P	Lactaldehyde dehydrogenase (EC 1.2.1.22) (Aldehyde dehydrogenase A) (Glycolaldehyde dehydrogenase) (EC 1.2.1.21)
ruditapes_c16658	D-arabinose catabolic process	other metabolic processes	P	Lactaldehyde dehydrogenase (EC 1.2.1.22) (Aldehyde dehydrogenase A) (Glycolaldehyde dehydrogenase) (EC 1.2.1.21)
ruditapes_c16658	rhamnose catabolic process	other metabolic processes	P	Lactaldehyde dehydrogenase (EC 1.2.1.22) (Aldehyde dehydrogenase A) (Glycolaldehyde dehydrogenase) (EC 1.2.1.21)
ruditapes_c16658	oxidation reduction	other metabolic processes	P	Lactaldehyde dehydrogenase (EC 1.2.1.22) (Aldehyde dehydrogenase A) (Glycolaldehyde dehydrogenase) (EC 1.2.1.21)
ruditapes_c16658	metabolic process	other metabolic processes	P	Lactaldehyde dehydrogenase (EC 1.2.1.22) (Aldehyde dehydrogenase A) (Glycolaldehyde dehydrogenase) (EC 1.2.1.21)
ruditapes_c15595	axial cellular bud site selection	cell organization and biogenesis	P	Bud site selection protein 3
ruditapes_c15595	regulation of Rho protein signal transduction	signal transduction	P	Bud site selection protein 3
ruditapes_c15595	cellular bud site selection	cell organization and biogenesis	P	Bud site selection protein 3
ruditapes_c15595	cell cycle	cell cycle and proliferation	P	Bud site selection protein 3
ruditapes_c15595	cytokinesis	other biological processes	P	Bud site selection protein 3
ruditapes_c28287	response to DNA damage stimulus	stress response	P	DNA polymerase IV (POL IV) (EC 2.7.7.7)
ruditapes_c28287	double-strand break repair via nonhomologous end joining	stress response	P	DNA polymerase IV (POL IV) (EC 2.7.7.7)
ruditapes_c28287	double-strand break repair via nonhomologous end joining	DNA metabolism	P	DNA polymerase IV (POL IV) (EC 2.7.7.7)
ruditapes_c28287	DNA repair	stress response	P	DNA polymerase IV (POL IV) (EC 2.7.7.7)
ruditapes_c28287	DNA repair	DNA metabolism	P	DNA polymerase IV (POL IV) (EC 2.7.7.7)
ruditapes_c28287	double-strand break repair	stress response	P	DNA polymerase IV (POL IV) (EC 2.7.7.7)
ruditapes_c28287	double-strand break repair	DNA metabolism	P	DNA polymerase IV (POL IV) (EC 2.7.7.7)
ruditapes_c28287	"base-excision repair, gap-filling"	stress response	P	DNA polymerase IV (POL IV) (EC 2.7.7.7)
ruditapes_c28287	"base-excision repair, gap-filling"	DNA metabolism	P	DNA polymerase IV (POL IV) (EC 2.7.7.7)
ruditapes_c15568	regulation of cell size	other biological processes	P	Uncharacterized membrane protein YCR061W
ruditapes_c28651	cytoplasmic mRNA processing body assembly	cell organization and biogenesis	P	DNA topoisomerase 2-associated protein PAT1 (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
ruditapes_c28651	formation of translation preinitiation complex	protein metabolism	P	DNA topoisomerase 2-associated protein PAT1 (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
ruditapes_c28651	formation of translation preinitiation complex	cell organization and biogenesis	P	DNA topoisomerase 2-associated protein PAT1 (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
ruditapes_c28651	chromosome segregation	other biological processes	P	DNA topoisomerase 2-associated protein PAT1 (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
ruditapes_c28651	regulation of translational initiation	protein metabolism	P	DNA topoisomerase 2-associated protein PAT1 (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
ruditapes_c28651	regulation of translation	protein metabolism	P	DNA topoisomerase 2-associated protein PAT1 (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
ruditapes_c28651	cell cycle	cell cycle and proliferation	P	DNA topoisomerase 2-associated protein PAT1 (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
ruditapes_c28651	deadenylation-dependent decapping of nuclear-transcribed mRNA	RNA metabolism	P	DNA topoisomerase 2-associated protein PAT1 (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
ruditapes_c28651	cell division	other biological processes	P	DNA topoisomerase 2-associated protein PAT1 (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
ruditapes_c28651	negative regulation of translational initiation	protein metabolism	P	DNA topoisomerase 2-associated protein PAT1 (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
ruditapes_c28651	mRNA processing	RNA metabolism	P	DNA topoisomerase 2-associated protein PAT1 (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
ruditapes_c29110	"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay"	RNA metabolism	P	General negative regulator of transcription subunit 1 (Cell division cycle protein 39)
ruditapes_c29110	"regulation of transcription, DNA-dependent"	RNA metabolism	P	General negative regulator of transcription subunit 1 (Cell division cycle protein 39)
ruditapes_c29110	pseudohyphal growth	other biological processes	P	General negative regulator of transcription subunit 1 (Cell division cycle protein 39)
ruditapes_c29110	RNA elongation from RNA polymerase II promoter	RNA metabolism	P	General negative regulator of transcription subunit 1 (Cell division cycle protein 39)
ruditapes_c29110	nuclear-transcribed mRNA poly(A) tail shortening	RNA metabolism	P	General negative regulator of transcription subunit 1 (Cell division cycle protein 39)
ruditapes_c29110	"transcription, DNA-dependent"	RNA metabolism	P	General negative regulator of transcription subunit 1 (Cell division cycle protein 39)
ruditapes_c29110	response to pheromone during conjugation with cellular fusion	other biological processes	P	General negative regulator of transcription subunit 1 (Cell division cycle protein 39)
ruditapes_c29110	regulation of cell cycle	cell cycle and proliferation	P	General negative regulator of transcription subunit 1 (Cell division cycle protein 39)
ruditapes_c29110	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	General negative regulator of transcription subunit 1 (Cell division cycle protein 39)
ruditapes_c29110	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	General negative regulator of transcription subunit 1 (Cell division cycle protein 39)
ruditapes2_c213	purine base metabolic process	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes2_c213	oxidation reduction	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes_c10155	transport	transport	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH dehydrogenase flavoprotein 1) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes2_c793	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH dehydrogenase flavoprotein 1) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes2_c793	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH dehydrogenase flavoprotein 1) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes_c10155	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH dehydrogenase flavoprotein 1) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes2_c793	transport	transport	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH dehydrogenase flavoprotein 1) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes_c10155	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH dehydrogenase flavoprotein 1) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes_c17767	imaginal disc-derived wing vein morphogenesis	developmental processes	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c17767	amnioserosa formation	developmental processes	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c17767	positive regulation of BMP signaling pathway	signal transduction	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c17767	embryonic pattern specification	developmental processes	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c17767	torso signaling pathway	signal transduction	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c17767	terminal region determination	developmental processes	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c17767	"maternal specification of dorsal/ventral axis, oocyte, soma encoded"	developmental processes	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c17767	"maternal specification of dorsal/ventral axis, oocyte, soma encoded"	cell organization and biogenesis	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c17767	multicellular organismal development	developmental processes	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c17767	protein processing	protein metabolism	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c17767	regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c17767	proteolysis	protein metabolism	P	Dorsal-ventral patterning protein tolloid (EC 3.4.24.-)
ruditapes_c9535	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c23877	immune response	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c9535	antigen processing and presentation	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c23877	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c9535	proteolysis	protein metabolism	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c23877	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent"	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c23877	antigen processing and presentation	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c9535	immune response	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c23877	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c9535	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent"	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c23877	proteolysis	protein metabolism	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c9535	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c9535	adaptive immune response	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c23877	adaptive immune response	other biological processes	P	Cathepsin S (EC 3.4.22.27)
ruditapes2_c525	proteolysis	protein metabolism	P	Oryzain alpha chain (EC 3.4.22.-)
ruditapes_s39423	proteolysis	protein metabolism	P	Oryzain alpha chain (EC 3.4.22.-)
ruditapes_c35243	proteolysis	protein metabolism	P	Digestive cysteine proteinase 2 (EC 3.4.22.-)
ruditapes_c7023	proteolysis	protein metabolism	P	Digestive cysteine proteinase 2 (EC 3.4.22.-)
ruditapes_c1257	proteolysis	protein metabolism	P	Digestive cysteine proteinase 2 (EC 3.4.22.-)
ruditapes_c5318	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes_lrc35790	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes_c11131	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes_s38388	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes_c30014	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes_c38681	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes_c10814	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes2_lrc4931	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes2_c4541	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes2_c6057	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes_lrc38727	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes_c8441	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes2_lrc5196	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes_s34852	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes2_c3495	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes_lrc35122	proteolysis	protein metabolism	P	Digestive cysteine proteinase 3 (EC 3.4.22.-)
ruditapes_c1438	negative regulation of catalytic activity	other biological processes	P	Metalloproteinase inhibitor 2 (Tissue inhibitor of metalloproteinases 2) (TIMP-2)
ruditapes_c28622	regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	apoptosis	death	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	mRNA metabolic process	RNA metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent"	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	S phase of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	apoptosis	death	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	M/G1 transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	protein polyubiquitination	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	gene expression	other metabolic processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	regulation of apoptosis	death	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	M/G1 transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	regulation of apoptosis	death	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent"	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	interspecies interaction between organisms	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	interspecies interaction between organisms	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	viral reproduction	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	cell cycle checkpoint	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	cellular nitrogen compound metabolic process	other metabolic processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	cellular nitrogen compound metabolic process	other metabolic processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	RNA metabolic process	RNA metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	apoptosis	death	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	mRNA metabolic process	RNA metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	proteolysis	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	proteolysis	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	regulation of amino acid metabolic process	other metabolic processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	cell cycle checkpoint	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	mRNA metabolic process	RNA metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	regulation of amino acid metabolic process	other metabolic processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	protein polyubiquitination	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	cellular nitrogen compound metabolic process	other metabolic processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	RNA metabolic process	RNA metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	RNA metabolic process	RNA metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	regulation of amino acid metabolic process	other metabolic processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	viral reproduction	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	viral reproduction	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	gene expression	other metabolic processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent"	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	S phase of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	regulation of apoptosis	death	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	proteolysis	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	S phase of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	protein polyubiquitination	protein metabolism	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c36540	cell cycle checkpoint	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c28622	gene expression	other metabolic processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	M/G1 transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes_c5320	interspecies interaction between organisms	other biological processes	P	Proteasome subunit alpha type-3 (EC 3.4.25.1) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (Proteasome component C8)
ruditapes2_c3448	endothelial cell migration	other biological processes	P	Protein S100-P (Migration-inducing gene 9 protein) (MIG9) (Protein S100-E) (S100 calcium-binding protein P)
ruditapes_lrc17952	oogenesis	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	spermatid development	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	chromosome organization	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	regulation of R7 cell differentiation	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	cell division	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	female germ-line stem cell division	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	regulation of protein stability	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	cyclin catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	meiosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	male meiosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	compound eye morphogenesis	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	mitosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	mitosis	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	cell division	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	regulation of protein stability	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	male meiosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	cyclin catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	female germ-line stem cell division	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	spermatid development	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	cell cycle	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	male meiosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	cell division	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	chromosome organization	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	protein ubiquitination	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	neuron remodeling	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	regulation of protein stability	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	female germ-line stem cell division	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	protein ubiquitination	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	germ-line stem cell maintenance	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	cell division	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	compound eye photoreceptor cell differentiation	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	cyclin catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	protein ubiquitination	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	mitosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	mitosis	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	regulation of protein stability	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	oogenesis	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	mitosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	mitosis	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	regulation of R7 cell differentiation	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	compound eye photoreceptor cell differentiation	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	female germ-line stem cell division	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	meiosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	cell cycle	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	male meiosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	mitosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	mitosis	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	germ-line stem cell maintenance	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	chromosome organization	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	compound eye photoreceptor cell differentiation	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	spermatid development	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	male meiosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	oogenesis	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	regulation of R7 cell differentiation	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	chromosome organization	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	compound eye morphogenesis	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	spermatid development	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	neuron remodeling	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	germ-line stem cell maintenance	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	chromosome organization	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	cyclin catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	neuron remodeling	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	oogenesis	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	cell cycle	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	female germ-line stem cell division	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	compound eye morphogenesis	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	germ-line stem cell maintenance	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	meiosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	mitosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	mitosis	cell organization and biogenesis	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	regulation of R7 cell differentiation	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	cell cycle	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	cyclin catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	cell division	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	meiosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	compound eye morphogenesis	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	germ-line stem cell maintenance	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	neuron remodeling	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	spermatid development	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	oogenesis	other biological processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_lrc17952	compound eye photoreceptor cell differentiation	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	regulation of R7 cell differentiation	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	cell cycle	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	meiosis	cell cycle and proliferation	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c3208	compound eye photoreceptor cell differentiation	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	protein ubiquitination	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	neuron remodeling	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	regulation of protein stability	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c12050	protein ubiquitination	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c904	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes2_c11	compound eye morphogenesis	developmental processes	P	Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Protein effete) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)
ruditapes_c26993	metabolic process	other metabolic processes	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7)
ruditapes_c26993	DNA repair	stress response	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7)
ruditapes_c26993	DNA repair	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7)
ruditapes_c26993	response to DNA damage stimulus	stress response	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7)
ruditapes_c26993	DNA replication	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7)
ruditapes_c26993	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7)
ruditapes_c24799	oxidation reduction	other metabolic processes	P	3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 3 (3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type III) (3-beta-HSD III) [Includes: 3-beta-hydroxy-Delta(5)-steroid dehydrogenase (EC 1.1.1.145) (3-beta-hydroxy-5-ene steroid dehydrogenase) (Progesterone reductase); Steroid Delta-isomerase (EC 5.3.3.1) (Delta-5-3-ketosteroid isomerase)]
ruditapes_c24799	metabolic process	other metabolic processes	P	3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 3 (3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type III) (3-beta-HSD III) [Includes: 3-beta-hydroxy-Delta(5)-steroid dehydrogenase (EC 1.1.1.145) (3-beta-hydroxy-5-ene steroid dehydrogenase) (Progesterone reductase); Steroid Delta-isomerase (EC 5.3.3.1) (Delta-5-3-ketosteroid isomerase)]
ruditapes_c24799	steroid biosynthetic process	other metabolic processes	P	3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 3 (3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type III) (3-beta-HSD III) [Includes: 3-beta-hydroxy-Delta(5)-steroid dehydrogenase (EC 1.1.1.145) (3-beta-hydroxy-5-ene steroid dehydrogenase) (Progesterone reductase); Steroid Delta-isomerase (EC 5.3.3.1) (Delta-5-3-ketosteroid isomerase)]
ruditapes_c27452	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)
ruditapes_c27452	viral genome replication	other biological processes	P	RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)
ruditapes_c27452	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)
ruditapes2_c924	metabolic process	other metabolic processes	P	Non-cyanogenic beta-glucosidase (EC 3.2.1.21)
ruditapes2_c924	carbohydrate metabolic process	other metabolic processes	P	Non-cyanogenic beta-glucosidase (EC 3.2.1.21)
ruditapes_c23496	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase F (EGF) (EC 3.2.1.4) (Cellulase F) (Endo-1,4-beta-glucanase)"
ruditapes_c23496	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase F (EGF) (EC 3.2.1.4) (Cellulase F) (Endo-1,4-beta-glucanase)"
ruditapes_c23496	cellulose catabolic process	other metabolic processes	P	"Endoglucanase F (EGF) (EC 3.2.1.4) (Cellulase F) (Endo-1,4-beta-glucanase)"
ruditapes_c23496	metabolic process	other metabolic processes	P	"Endoglucanase F (EGF) (EC 3.2.1.4) (Cellulase F) (Endo-1,4-beta-glucanase)"
ruditapes_lrc32271	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c37285	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32271	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c37285	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c4665	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3169	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c4665	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3169	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c37285	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c4665	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32271	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3169	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c3169	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c37285	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_c4665	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc32271	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c12716	pathogenesis	other biological processes	P	Deoxyribonuclease (DNase) (EC 3.1.21.1) (Streptodornase)
ruditapes2_lrc5184	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_s38993	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_s38993	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_s38993	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes_s38993	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc5184	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc5184	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes2_lrc5184	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_c17171	intracellular protein transport	transport	P	Rab proteins geranylgeranyltransferase component A 2 (Choroideremia-like protein) (Rab escort protein 2) (REP-2)
ruditapes_c17171	positive regulation of GTPase activity	other biological processes	P	Rab proteins geranylgeranyltransferase component A 2 (Choroideremia-like protein) (Rab escort protein 2) (REP-2)
ruditapes_c17171	visual perception	other biological processes	P	Rab proteins geranylgeranyltransferase component A 2 (Choroideremia-like protein) (Rab escort protein 2) (REP-2)
ruditapes_c11287	carbohydrate transport	transport	P	Fructose permease IIC component (EIIC-Fru) (PTS system fructose-specific EIIC component) (p28)
ruditapes_c11287	phosphoenolpyruvate-dependent sugar phosphotransferase system	signal transduction	P	Fructose permease IIC component (EIIC-Fru) (PTS system fructose-specific EIIC component) (p28)
ruditapes_c11287	phosphoenolpyruvate-dependent sugar phosphotransferase system	transport	P	Fructose permease IIC component (EIIC-Fru) (PTS system fructose-specific EIIC component) (p28)
ruditapes_c11287	transport	transport	P	Fructose permease IIC component (EIIC-Fru) (PTS system fructose-specific EIIC component) (p28)
ruditapes2_c775	"transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase sigma factor RpoD (Sigma-70)
ruditapes2_c775	transcription initiation	cell organization and biogenesis	P	RNA polymerase sigma factor RpoD (Sigma-70)
ruditapes2_c775	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase sigma factor RpoD (Sigma-70)
ruditapes2_c775	transcription initiation	RNA metabolism	P	RNA polymerase sigma factor RpoD (Sigma-70)
ruditapes_c26194	polysaccharide biosynthetic process	other metabolic processes	P	Exopolysaccharide production protein ExoZ
ruditapes_c26194	nodulation	other biological processes	P	Exopolysaccharide production protein ExoZ
ruditapes_c8678	metabolic process	other metabolic processes	P	Envelope protein F13 homolog (43 kDa protein) (p43K)
ruditapes_c8568	ion transport	transport	P	Glutamate receptor
ruditapes_c8568	transport	transport	P	Glutamate receptor
ruditapes_c8568	ionotropic glutamate receptor signaling pathway	signal transduction	P	Glutamate receptor
ruditapes_c10912	transformation of host cell by virus	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	apoptosis	death	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	ion transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c10912	metabolic process	other metabolic processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c16384	conjugation with cellular fusion	other biological processes	P	Protein ste6
ruditapes_c16384	small GTPase mediated signal transduction	signal transduction	P	Protein ste6
ruditapes_c16384	regulation of small GTPase mediated signal transduction	signal transduction	P	Protein ste6
ruditapes_c30948	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Serine-arginine protein 55 (SRP55) (52 kDa bracketing protein) (B52 protein) (Protein enhancer of deformed)
ruditapes_c30948	mRNA processing	RNA metabolism	P	Serine-arginine protein 55 (SRP55) (52 kDa bracketing protein) (B52 protein) (Protein enhancer of deformed)
ruditapes_c30948	"regulation of nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Serine-arginine protein 55 (SRP55) (52 kDa bracketing protein) (B52 protein) (Protein enhancer of deformed)
ruditapes_c30948	"regulation of alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Serine-arginine protein 55 (SRP55) (52 kDa bracketing protein) (B52 protein) (Protein enhancer of deformed)
ruditapes_c30948	mitosis	cell cycle and proliferation	P	Serine-arginine protein 55 (SRP55) (52 kDa bracketing protein) (B52 protein) (Protein enhancer of deformed)
ruditapes_c30948	mitosis	cell organization and biogenesis	P	Serine-arginine protein 55 (SRP55) (52 kDa bracketing protein) (B52 protein) (Protein enhancer of deformed)
ruditapes_c30948	RNA splicing	RNA metabolism	P	Serine-arginine protein 55 (SRP55) (52 kDa bracketing protein) (B52 protein) (Protein enhancer of deformed)
ruditapes2_c619	flavonoid biosynthetic process	other metabolic processes	P	NAD(P)H-dependent 6'-deoxychalcone synthase (EC 2.3.1.170)
ruditapes2_c619	oxidation reduction	other metabolic processes	P	NAD(P)H-dependent 6'-deoxychalcone synthase (EC 2.3.1.170)
ruditapes_c16747	ion transport	transport	P	Gamma-aminobutyric acid receptor subunit beta (GABA(A) receptor)
ruditapes_c16747	chloride transport	transport	P	Gamma-aminobutyric acid receptor subunit beta (GABA(A) receptor)
ruditapes_c16747	transport	transport	P	Gamma-aminobutyric acid receptor subunit beta (GABA(A) receptor)
ruditapes_c28092	cyclic nucleotide biosynthetic process	other metabolic processes	P	Adenylate cyclase type 4 (EC 4.6.1.1) (ATP pyrophosphate-lyase 4) (Adenylate cyclase type IV) (Adenylyl cyclase 4)
ruditapes_c28092	cAMP biosynthetic process	other metabolic processes	P	Adenylate cyclase type 4 (EC 4.6.1.1) (ATP pyrophosphate-lyase 4) (Adenylate cyclase type IV) (Adenylyl cyclase 4)
ruditapes2_c2790	rRNA processing	RNA metabolism	P	40S ribosomal protein S7-A (RP30) (RP40)
ruditapes2_c2790	ribosome biogenesis	other biological processes	P	40S ribosomal protein S7-A (RP30) (RP40)
ruditapes2_c2790	ribosomal small subunit biogenesis	other biological processes	P	40S ribosomal protein S7-A (RP30) (RP40)
ruditapes2_c2790	translation	protein metabolism	P	40S ribosomal protein S7-A (RP30) (RP40)
ruditapes_s38962	translation	protein metabolism	P	"Ribosomal protein S3, mitochondrial"
ruditapes_c10234	translation	protein metabolism	P	"Ribosomal protein S19, mitochondrial"
ruditapes_c5351	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase D (PPIase D) (EC 5.2.1.8) (40 kDa peptidyl-prolyl cis-trans isomerase) (Cyclophilin-40) (CYP-40) (Cyclophilin-related protein) (Estrogen receptor-binding cyclophilin) (Rotamase D)
ruditapes_c5351	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase D (PPIase D) (EC 5.2.1.8) (40 kDa peptidyl-prolyl cis-trans isomerase) (Cyclophilin-40) (CYP-40) (Cyclophilin-related protein) (Estrogen receptor-binding cyclophilin) (Rotamase D)
ruditapes2_c562	wound healing	stress response	P	Protein S100-A8 (Calgranulin-A) (Chemotactic cytokine CP-10) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (Pro-inflammatory S100 cytokine) (S100 calcium-binding protein A8)
ruditapes2_c562	chronic inflammatory response	stress response	P	Protein S100-A8 (Calgranulin-A) (Chemotactic cytokine CP-10) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (Pro-inflammatory S100 cytokine) (S100 calcium-binding protein A8)
ruditapes2_c562	response to lipopolysaccharide	other biological processes	P	Protein S100-A8 (Calgranulin-A) (Chemotactic cytokine CP-10) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (Pro-inflammatory S100 cytokine) (S100 calcium-binding protein A8)
ruditapes2_c562	acute inflammatory response	stress response	P	Protein S100-A8 (Calgranulin-A) (Chemotactic cytokine CP-10) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (Pro-inflammatory S100 cytokine) (S100 calcium-binding protein A8)
ruditapes2_c562	response to ethanol	other biological processes	P	Protein S100-A8 (Calgranulin-A) (Chemotactic cytokine CP-10) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (Pro-inflammatory S100 cytokine) (S100 calcium-binding protein A8)
ruditapes2_c562	chemotaxis	other biological processes	P	Protein S100-A8 (Calgranulin-A) (Chemotactic cytokine CP-10) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (Pro-inflammatory S100 cytokine) (S100 calcium-binding protein A8)
ruditapes2_c562	response to zinc ion	other biological processes	P	Protein S100-A8 (Calgranulin-A) (Chemotactic cytokine CP-10) (Leukocyte L1 complex light chain) (Migration inhibitory factor-related protein 8) (MRP-8) (p8) (Pro-inflammatory S100 cytokine) (S100 calcium-binding protein A8)
ruditapes_c16988	phosphorylation	other metabolic processes	P	Aliphatic amidase expression-regulating protein
ruditapes_c16988	amino acid transport	transport	P	Aliphatic amidase expression-regulating protein
ruditapes_c408	transmembrane transport	transport	P	"ADP,ATP carrier protein (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT)"
ruditapes_c408	transport	transport	P	"ADP,ATP carrier protein (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT)"
ruditapes2_c278	translation	protein metabolism	P	40S ribosomal protein S26
ruditapes_lrc23197	translation	protein metabolism	P	40S ribosomal protein S26
ruditapes2_c4832	translation	protein metabolism	P	40S ribosomal protein S26
ruditapes_s35775	translation	protein metabolism	P	40S ribosomal protein S26
ruditapes_c23022	cell adhesion	cell adhesion	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes_lrc18776	hyperosmotic response	stress response	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	response to other organism	other biological processes	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	chemotaxis to cAMP	other biological processes	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	negative regulation of actin filament depolymerization	cell organization and biogenesis	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	cell motion	other biological processes	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	phagocytosis	transport	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	phagocytosis	cell organization and biogenesis	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	actin filament organization	cell organization and biogenesis	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	endocytosis	transport	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	endocytosis	cell organization and biogenesis	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	negative regulation of actin nucleation	cell organization and biogenesis	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	response to bacterium	other biological processes	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	cytokinesis	other biological processes	P	Coronin-A (Coronin) (p55)
ruditapes_lrc18776	negative regulation of actin filament depolymerization	protein metabolism	P	Coronin-A (Coronin) (p55)
ruditapes2_c1171	positive regulation of cholesterol efflux	transport	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes2_c1171	response to toxin	other biological processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes2_c1171	positive regulation of binding	other biological processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes2_c1171	carboxylic acid catabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes2_c1171	negative regulation of plasma lipoprotein oxidation	protein metabolism	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes2_c1171	positive regulation of transporter activity	transport	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes2_c1171	organophosphate catabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes2_c1171	cholesterol metabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes2_c1171	response to external stimulus	other biological processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes2_c1171	phosphatidylcholine metabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes2_c1171	aromatic compound catabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes2_c1171	lipid metabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)
ruditapes_lrc26338	viral genome replication	other biological processes	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_lrc26338	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_lrc26338	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_s38097	one-carbon compound metabolic process	other metabolic processes	P	Methane monooxygenase component A beta chain (EC 1.14.13.25) (Methane hydroxylase)
ruditapes_s38097	oxidation reduction	other metabolic processes	P	Methane monooxygenase component A beta chain (EC 1.14.13.25) (Methane hydroxylase)
ruditapes_s38097	cellular aromatic compound metabolic process	other metabolic processes	P	Methane monooxygenase component A beta chain (EC 1.14.13.25) (Methane hydroxylase)
ruditapes_c18730	defense response to bacterium	stress response	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes_c18730	cytolysis	death	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes_c18730	peptidoglycan catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes_c18730	cell wall macromolecule catabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes_c18730	metabolic process	other metabolic processes	P	Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
ruditapes_c24738	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein p5.6; Protein p32; NTPase (EC 3.6.1.15) (p39); Protein p30; Viral genome-linked protein (VPg) (p13); Protease-polymerase p76 (Pro-Pol) (EC 2.7.7.48) (EC 3.4.22.66)]
ruditapes_c24738	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein p5.6; Protein p32; NTPase (EC 3.6.1.15) (p39); Protein p30; Viral genome-linked protein (VPg) (p13); Protease-polymerase p76 (Pro-Pol) (EC 2.7.7.48) (EC 3.4.22.66)]
ruditapes_c24738	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein p5.6; Protein p32; NTPase (EC 3.6.1.15) (p39); Protein p30; Viral genome-linked protein (VPg) (p13); Protease-polymerase p76 (Pro-Pol) (EC 2.7.7.48) (EC 3.4.22.66)]
ruditapes_c24738	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein p5.6; Protein p32; NTPase (EC 3.6.1.15) (p39); Protein p30; Viral genome-linked protein (VPg) (p13); Protease-polymerase p76 (Pro-Pol) (EC 2.7.7.48) (EC 3.4.22.66)]
ruditapes_c24738	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein p5.6; Protein p32; NTPase (EC 3.6.1.15) (p39); Protein p30; Viral genome-linked protein (VPg) (p13); Protease-polymerase p76 (Pro-Pol) (EC 2.7.7.48) (EC 3.4.22.66)]
ruditapes_c31597	DNA replication	DNA metabolism	P	Non-capsid protein NS-1 (NCVP1) (Non-structural protein NS1)
ruditapes_c31597	viral genome replication	other biological processes	P	Non-capsid protein NS-1 (NCVP1) (Non-structural protein NS1)
ruditapes2_c1038	metabolic process	other metabolic processes	P	"Retinal dehydrogenase 1 (RALDH 1) (RalDH1) (EC 1.2.1.36) (ALDH-E1) (ALHDII) (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic)"
ruditapes_c3450	metabolic process	other metabolic processes	P	"Retinal dehydrogenase 1 (RALDH 1) (RalDH1) (EC 1.2.1.36) (ALDH-E1) (ALHDII) (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic)"
ruditapes_c2045	oxidation reduction	other metabolic processes	P	"Retinal dehydrogenase 1 (RALDH 1) (RalDH1) (EC 1.2.1.36) (ALDH-E1) (ALHDII) (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic)"
ruditapes2_c212	oxidation reduction	other metabolic processes	P	"Retinal dehydrogenase 1 (RALDH 1) (RalDH1) (EC 1.2.1.36) (ALDH-E1) (ALHDII) (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic)"
ruditapes_c2045	metabolic process	other metabolic processes	P	"Retinal dehydrogenase 1 (RALDH 1) (RalDH1) (EC 1.2.1.36) (ALDH-E1) (ALHDII) (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic)"
ruditapes2_c212	metabolic process	other metabolic processes	P	"Retinal dehydrogenase 1 (RALDH 1) (RalDH1) (EC 1.2.1.36) (ALDH-E1) (ALHDII) (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic)"
ruditapes_c3450	oxidation reduction	other metabolic processes	P	"Retinal dehydrogenase 1 (RALDH 1) (RalDH1) (EC 1.2.1.36) (ALDH-E1) (ALHDII) (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic)"
ruditapes2_c1038	oxidation reduction	other metabolic processes	P	"Retinal dehydrogenase 1 (RALDH 1) (RalDH1) (EC 1.2.1.36) (ALDH-E1) (ALHDII) (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic)"
ruditapes_c31122	transport	transport	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes_c31248	interspecies interaction between organisms	other biological processes	P	Polyprotein P3 (P194 protein) [Cleaved into: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase/Ribonuclease H (RT) (EC 2.7.7.49) (EC 3.1.26.4) (p55)]
ruditapes_c31248	transport	transport	P	Polyprotein P3 (P194 protein) [Cleaved into: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase/Ribonuclease H (RT) (EC 2.7.7.49) (EC 3.1.26.4) (p55)]
ruditapes_c31248	"spread of virus within host, cell to cell"	other biological processes	P	Polyprotein P3 (P194 protein) [Cleaved into: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase/Ribonuclease H (RT) (EC 2.7.7.49) (EC 3.1.26.4) (p55)]
ruditapes_c31248	proteolysis	protein metabolism	P	Polyprotein P3 (P194 protein) [Cleaved into: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase/Ribonuclease H (RT) (EC 2.7.7.49) (EC 3.1.26.4) (p55)]
ruditapes_c31248	RNA-dependent DNA replication	DNA metabolism	P	Polyprotein P3 (P194 protein) [Cleaved into: Putative movement protein (MP); Capsid protein (Coat protein) (CP); Protease (PR) (EC 3.4.23.-); Reverse transcriptase/Ribonuclease H (RT) (EC 2.7.7.49) (EC 3.1.26.4) (p55)]
ruditapes_c12484	response to stress	stress response	P	Heat shock 70 kDa protein
ruditapes2_c235	translation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes2_c235	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes2_c235	translational elongation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes2_c489	locomotion	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c20875	embryonic development ending in birth or egg hatching	developmental processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_s37988	nematode larval development	developmental processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c20875	secretion by cell	transport	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c20875	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes2_c489	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes2_c489	secretion by cell	transport	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_s37988	growth	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_s37988	receptor-mediated endocytosis	cell organization and biogenesis	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c20875	locomotion	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes2_c489	embryonic development ending in birth or egg hatching	developmental processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c20875	body morphogenesis	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c20875	nematode larval development	developmental processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_s37988	locomotion	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes2_c489	body morphogenesis	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes2_c489	nematode larval development	developmental processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_s37988	embryonic development ending in birth or egg hatching	developmental processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c20875	growth	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_s37988	receptor-mediated endocytosis	transport	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_s37988	negative regulation of multicellular organism growth	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_s37988	secretion by cell	transport	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_s37988	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes2_c489	growth	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c20875	receptor-mediated endocytosis	transport	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c20875	receptor-mediated endocytosis	cell organization and biogenesis	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes2_c489	negative regulation of multicellular organism growth	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes2_c489	receptor-mediated endocytosis	transport	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes2_c489	receptor-mediated endocytosis	cell organization and biogenesis	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c20875	negative regulation of multicellular organism growth	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_s37988	body morphogenesis	other biological processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (Protein dumpy-14) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c7993	cell adhesion	cell adhesion	P	Lysosome membrane protein 2 (85 kDa lysosomal membrane sialoglycoprotein) (LGP85) (CD36 antigen-like 2) (Lysosome membrane protein II) (LIMP II) (Scavenger receptor class B member 2) (CD antigen CD36)
ruditapes_c7993	protein targeting to lysosome	transport	P	Lysosome membrane protein 2 (85 kDa lysosomal membrane sialoglycoprotein) (LGP85) (CD36 antigen-like 2) (Lysosome membrane protein II) (LIMP II) (Scavenger receptor class B member 2) (CD antigen CD36)
ruditapes_c8263	lipid storage	other biological processes	P	Eukaryotic initiation factor 4A (eIF-4A) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A) (Initiation factor 1)
ruditapes_c8263	locomotion	other biological processes	P	Eukaryotic initiation factor 4A (eIF-4A) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A) (Initiation factor 1)
ruditapes_c8263	determination of adult life span	developmental processes	P	Eukaryotic initiation factor 4A (eIF-4A) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A) (Initiation factor 1)
ruditapes_c8263	growth	other biological processes	P	Eukaryotic initiation factor 4A (eIF-4A) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A) (Initiation factor 1)
ruditapes_c8263	embryonic development ending in birth or egg hatching	developmental processes	P	Eukaryotic initiation factor 4A (eIF-4A) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A) (Initiation factor 1)
ruditapes_c8263	nematode larval development	developmental processes	P	Eukaryotic initiation factor 4A (eIF-4A) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A) (Initiation factor 1)
ruditapes_c8263	reproduction	other biological processes	P	Eukaryotic initiation factor 4A (eIF-4A) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A) (Initiation factor 1)
ruditapes_c8263	positive regulation of growth rate	other biological processes	P	Eukaryotic initiation factor 4A (eIF-4A) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A) (Initiation factor 1)
ruditapes_c8263	translation	protein metabolism	P	Eukaryotic initiation factor 4A (eIF-4A) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A) (Initiation factor 1)
ruditapes_c8263	translational initiation	protein metabolism	P	Eukaryotic initiation factor 4A (eIF-4A) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A) (Initiation factor 1)
ruditapes_c21063	cell cycle	cell cycle and proliferation	P	Mitogen-activated protein kinase 6 (MAP kinase 6) (MAPK 6) (EC 2.7.11.24) (Extracellular signal-regulated kinase 3) (ERK-3) (p55-MAPK)
ruditapes_c21063	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase 6 (MAP kinase 6) (MAPK 6) (EC 2.7.11.24) (Extracellular signal-regulated kinase 3) (ERK-3) (p55-MAPK)
ruditapes_c21063	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase 6 (MAP kinase 6) (MAPK 6) (EC 2.7.11.24) (Extracellular signal-regulated kinase 3) (ERK-3) (p55-MAPK)
ruditapes_c3012	carbohydrate metabolic process	other metabolic processes	P	Alpha-galactosidase (EC 3.2.1.22) (Melibiase)
ruditapes_c3012	metabolic process	other metabolic processes	P	Alpha-galactosidase (EC 3.2.1.22) (Melibiase)
ruditapes_c15537	lipopolysaccharide biosynthetic process	other metabolic processes	P	Lipopolysaccharide biosynthesis protein RffA
ruditapes_c21728	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c21728	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c21728	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c21728	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c17614	response to drug	other biological processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c17614	response to copper ion	other biological processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c17614	response to osmotic stress	stress response	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c17614	oxidation reduction	other metabolic processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c17614	sperm motility	other biological processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c17614	response to hormone stimulus	other biological processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c17614	response to cadmium ion	other biological processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c17614	response to nutrient levels	other biological processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c23342	transport	transport	P	Sodium-dependent dopamine transporter (DA transporter) (DAT) (Solute carrier family 6 member 3)
ruditapes_c23342	neurotransmitter transport	transport	P	Sodium-dependent dopamine transporter (DA transporter) (DAT) (Solute carrier family 6 member 3)
ruditapes_c26081	metabolic process	other metabolic processes	P	Hexokinase-3 (EC 2.7.1.1) (Hexokinase type III) (HK III)
ruditapes_c26081	biological_process	other biological processes	P	Hexokinase-3 (EC 2.7.1.1) (Hexokinase type III) (HK III)
ruditapes_c26081	glycolysis	other metabolic processes	P	Hexokinase-3 (EC 2.7.1.1) (Hexokinase type III) (HK III)
ruditapes_c26081	phosphorylation	other metabolic processes	P	Hexokinase-3 (EC 2.7.1.1) (Hexokinase type III) (HK III)
ruditapes_c26081	carbohydrate metabolic process	other metabolic processes	P	Hexokinase-3 (EC 2.7.1.1) (Hexokinase type III) (HK III)
ruditapes_lrc27997	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Fragment)
ruditapes_lrc27997	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Fragment)
ruditapes_lrc27997	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Fragment)
ruditapes_lrc27997	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Fragment)
ruditapes_lrc27997	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Fragment)
ruditapes_lrc27997	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Fragment)
ruditapes_s37924	translation	protein metabolism	P	40S ribosomal protein S2
ruditapes_s37924	formation of translation preinitiation complex	protein metabolism	P	40S ribosomal protein S2
ruditapes_s37924	formation of translation preinitiation complex	cell organization and biogenesis	P	40S ribosomal protein S2
ruditapes_s37924	ribosomal small subunit assembly	cell organization and biogenesis	P	40S ribosomal protein S2
ruditapes_c10509	cell surface receptor linked signal transduction	signal transduction	P	"Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol 1,4,5-trisphosphate 3-kinase B) (IP3 3-kinase B) (IP3K B) (InsP 3-kinase B)"
ruditapes_c10509	MAPKKK cascade	signal transduction	P	"Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol 1,4,5-trisphosphate 3-kinase B) (IP3 3-kinase B) (IP3K B) (InsP 3-kinase B)"
ruditapes_c10509	phosphorylation	other metabolic processes	P	"Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol 1,4,5-trisphosphate 3-kinase B) (IP3 3-kinase B) (IP3K B) (InsP 3-kinase B)"
ruditapes_c10509	positive regulation of alpha-beta T cell differentiation	developmental processes	P	"Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol 1,4,5-trisphosphate 3-kinase B) (IP3 3-kinase B) (IP3K B) (InsP 3-kinase B)"
ruditapes_c10509	thymic T cell selection	developmental processes	P	"Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol 1,4,5-trisphosphate 3-kinase B) (IP3 3-kinase B) (IP3K B) (InsP 3-kinase B)"
ruditapes_c10509	positive thymic T cell selection	developmental processes	P	"Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol 1,4,5-trisphosphate 3-kinase B) (IP3 3-kinase B) (IP3K B) (InsP 3-kinase B)"
ruditapes_c10509	T cell differentiation	developmental processes	P	"Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol 1,4,5-trisphosphate 3-kinase B) (IP3 3-kinase B) (IP3K B) (InsP 3-kinase B)"
ruditapes_c10509	positive regulation of Ras protein signal transduction	signal transduction	P	"Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol 1,4,5-trisphosphate 3-kinase B) (IP3 3-kinase B) (IP3K B) (InsP 3-kinase B)"
ruditapes_c10509	signal transduction	signal transduction	P	"Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol 1,4,5-trisphosphate 3-kinase B) (IP3 3-kinase B) (IP3K B) (InsP 3-kinase B)"
ruditapes_c30184	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-4 (EC 3.4.25.1) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome beta chain) (Proteasome chain 3) (Fragment)
ruditapes_c30184	proteolysis	protein metabolism	P	Proteasome subunit beta type-4 (EC 3.4.25.1) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome beta chain) (Proteasome chain 3) (Fragment)
ruditapes2_c1142	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-4 (EC 3.4.25.1) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome beta chain) (Proteasome chain 3) (Fragment)
ruditapes2_c1142	proteolysis	protein metabolism	P	Proteasome subunit beta type-4 (EC 3.4.25.1) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome beta chain) (Proteasome chain 3) (Fragment)
ruditapes_c24531	negative regulation of neuron apoptosis	death	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf)
ruditapes_c24531	response to cAMP	other biological processes	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf)
ruditapes_c24531	signal transduction	signal transduction	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf)
ruditapes_c24531	negative regulation of apoptosis	death	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf)
ruditapes_c24531	MAPKKK cascade	signal transduction	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf)
ruditapes_c24531	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf)
ruditapes_c24531	response to peptide hormone stimulus	other biological processes	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf)
ruditapes_c24531	positive regulation of ERK1 and ERK2 cascade	signal transduction	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf)
ruditapes_c24531	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf)
ruditapes_c24531	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf)
ruditapes2_c1210	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit beta type-5 (EC 3.4.25.1) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome chain 6) (Proteasome epsilon chain) (Proteasome subunit X)
ruditapes2_c1210	proteolysis	protein metabolism	P	Proteasome subunit beta type-5 (EC 3.4.25.1) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome chain 6) (Proteasome epsilon chain) (Proteasome subunit X)
ruditapes2_c1210	response to oxidative stress	stress response	P	Proteasome subunit beta type-5 (EC 3.4.25.1) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome chain 6) (Proteasome epsilon chain) (Proteasome subunit X)
ruditapes2_c1210	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-5 (EC 3.4.25.1) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome chain 6) (Proteasome epsilon chain) (Proteasome subunit X)
ruditapes_c21412	Wnt receptor signaling pathway	signal transduction	P	Protein Wnt-3 (Fragment)
ruditapes_c21412	multicellular organismal development	developmental processes	P	Protein Wnt-3 (Fragment)
ruditapes_c7358	cell adhesion	cell adhesion	P	Limulus clotting factor C (FC) (EC 3.4.21.84) [Cleaved into: Limulus clotting factor C heavy chain; Limulus clotting factor C light chain; Limulus clotting factor C chain A; Limulus clotting factor C chain B]
ruditapes_c7358	proteolysis	protein metabolism	P	Limulus clotting factor C (FC) (EC 3.4.21.84) [Cleaved into: Limulus clotting factor C heavy chain; Limulus clotting factor C light chain; Limulus clotting factor C chain A; Limulus clotting factor C chain B]
ruditapes_c7358	hemolymph coagulation	stress response	P	Limulus clotting factor C (FC) (EC 3.4.21.84) [Cleaved into: Limulus clotting factor C heavy chain; Limulus clotting factor C light chain; Limulus clotting factor C chain A; Limulus clotting factor C chain B]
ruditapes2_c1961	phosphorylation	other metabolic processes	P	Protein kinase 2 (PK2) (EC 2.7.11.1)
ruditapes2_c1961	protein amino acid phosphorylation	protein metabolism	P	Protein kinase 2 (PK2) (EC 2.7.11.1)
ruditapes2_c1961	chemotaxis	other biological processes	P	Protein kinase 2 (PK2) (EC 2.7.11.1)
ruditapes_c22868	protein amino acid dephosphorylation	protein metabolism	P	Tyrosine-protein phosphatase 1 (EC 3.1.3.48) (Fragment)
ruditapes_c17283	protein amino acid dephosphorylation	protein metabolism	P	Tyrosine-protein phosphatase 10 (EC 3.1.3.48) (Fragment)
ruditapes_c1419	oxidation reduction	other metabolic processes	P	NADP-dependent malic enzyme (NADP-ME) (EC 1.1.1.40)
ruditapes_c1419	malate metabolic process	other metabolic processes	P	NADP-dependent malic enzyme (NADP-ME) (EC 1.1.1.40)
ruditapes_c24112	activation of phospholipase C activity by serotonin receptor signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 2A (5-HT receptor 2A) (Serotonin receptor 2A)
ruditapes_c24112	inhibition of adenylate cyclase activity by serotonin receptor signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 2A (5-HT receptor 2A) (Serotonin receptor 2A)
ruditapes_c24112	inhibition of adenylate cyclase activity by serotonin receptor signaling pathway	other metabolic processes	P	5-hydroxytryptamine receptor 2A (5-HT receptor 2A) (Serotonin receptor 2A)
ruditapes_c24112	signal transduction	signal transduction	P	5-hydroxytryptamine receptor 2A (5-HT receptor 2A) (Serotonin receptor 2A)
ruditapes_c24112	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	5-hydroxytryptamine receptor 2A (5-HT receptor 2A) (Serotonin receptor 2A)
ruditapes_c24112	anesthesia-resistant memory	other biological processes	P	5-hydroxytryptamine receptor 2A (5-HT receptor 2A) (Serotonin receptor 2A)
ruditapes_c24112	G-protein coupled receptor protein signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 2A (5-HT receptor 2A) (Serotonin receptor 2A)
ruditapes_c7463	oxidation reduction	other metabolic processes	P	Quinone oxidoreductase 1 (EC 1.6.5.5) (NADPH:quinone reductase 1) (Zeta-crystallin homolog protein)
ruditapes_c22625	translation	protein metabolism	P	Putative peptide chain release factor homolog (RF-H)
ruditapes_c22625	translational termination	protein metabolism	P	Putative peptide chain release factor homolog (RF-H)
ruditapes_c22625	translational termination	cell organization and biogenesis	P	Putative peptide chain release factor homolog (RF-H)
ruditapes_lrc35014	limb bud formation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	skeletal system morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	chondrocyte differentiation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	tissue homeostasis	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	proteoglycan metabolic process	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	inner ear development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	notochord development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	visual perception	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	bone development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	skeletal system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	notochord development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	endochondral ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	inner ear morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	central nervous system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	regulation of gene expression	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	embryonic skeletal joint morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	regulation of gene expression	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	inner ear development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	sensory perception of sound	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	cartilage development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	skeletal system morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	limb bud formation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	limb morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	visual perception	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	chondrocyte differentiation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	cartilage development involved in endochondral bone morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	visual perception	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	embryonic skeletal joint morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	skeletal system morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	negative regulation of apoptosis	death	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	heart morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	cartilage development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	tissue homeostasis	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	proteoglycan metabolic process	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	bone development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	inner ear morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	limb bud formation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	palate development	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	cartilage condensation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	cartilage condensation	cell adhesion	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	bone development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	negative regulation of apoptosis	death	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	limb morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	tissue homeostasis	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	cartilage development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	notochord development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	cartilage condensation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	cartilage condensation	cell adhesion	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	sensory perception of sound	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	endochondral ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	endochondral ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	inner ear morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	inner ear development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	limb bud formation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	limb morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	skeletal system morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	skeletal system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	heart morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	visual perception	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	tissue homeostasis	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	sensory perception of sound	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	palate development	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	negative regulation of apoptosis	death	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	negative regulation of apoptosis	death	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	proteoglycan metabolic process	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	cartilage condensation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	cartilage condensation	cell adhesion	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	cartilage development involved in endochondral bone morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	cartilage development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	regulation of gene expression	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	central nervous system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	cartilage development involved in endochondral bone morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	chondrocyte differentiation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	chondrocyte differentiation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	central nervous system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	inner ear development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	bone development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	cartilage condensation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	cartilage condensation	cell adhesion	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	embryonic skeletal joint morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	sensory perception of sound	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	cartilage development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	palate development	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	tissue homeostasis	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	heart morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	bone development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	cartilage development involved in endochondral bone morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	skeletal system morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	central nervous system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	limb bud formation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	cartilage development involved in endochondral bone morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	negative regulation of apoptosis	death	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	endochondral ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	regulation of gene expression	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	inner ear development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	palate development	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	limb morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	skeletal system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	skeletal system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	proteoglycan metabolic process	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	notochord development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	sensory perception of sound	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	notochord development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	limb bud formation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	palate development	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	cartilage condensation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	cartilage condensation	cell adhesion	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	inner ear morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	heart morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	chondrocyte differentiation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	embryonic skeletal joint morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	regulation of gene expression	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	skeletal system morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	limb morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	tissue homeostasis	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	heart morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	proteoglycan metabolic process	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	chondrocyte differentiation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	cartilage development involved in endochondral bone morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	bone development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	visual perception	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	central nervous system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	negative regulation of apoptosis	death	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	palate development	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	embryonic skeletal joint morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	limb morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	proteoglycan metabolic process	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	embryonic skeletal joint morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	heart morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	inner ear morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	sensory perception of sound	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	skeletal system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	regulation of gene expression	other metabolic processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	notochord development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32147	endochondral ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	inner ear morphogenesis	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	central nervous system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc35014	visual perception	other biological processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	cartilage development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	inner ear development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes2_c4784	skeletal system development	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	cartilage condensation	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc37346	cartilage condensation	cell adhesion	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c1567	endochondral ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_lrc32352	ossification	developmental processes	P	Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]
ruditapes_c3905	response to cadmium ion	other biological processes	P	Pathogenesis-related protein 5 (PR-5)
ruditapes_c3905	defense response	stress response	P	Pathogenesis-related protein 5 (PR-5)
ruditapes_c3905	response to biotic stimulus	other biological processes	P	Pathogenesis-related protein 5 (PR-5)
ruditapes_c3905	systemic acquired resistance	stress response	P	Pathogenesis-related protein 5 (PR-5)
ruditapes_lrc36808	systemic acquired resistance	stress response	P	Pathogenesis-related protein 5 (PR-5)
ruditapes_lrc36808	response to biotic stimulus	other biological processes	P	Pathogenesis-related protein 5 (PR-5)
ruditapes_lrc36808	response to cadmium ion	other biological processes	P	Pathogenesis-related protein 5 (PR-5)
ruditapes_lrc36808	regulation of anthocyanin biosynthetic process	other metabolic processes	P	Pathogenesis-related protein 5 (PR-5)
ruditapes_c3905	response to virus	other biological processes	P	Pathogenesis-related protein 5 (PR-5)
ruditapes_lrc36808	defense response	stress response	P	Pathogenesis-related protein 5 (PR-5)
ruditapes_lrc36808	response to virus	other biological processes	P	Pathogenesis-related protein 5 (PR-5)
ruditapes_c3905	regulation of anthocyanin biosynthetic process	other metabolic processes	P	Pathogenesis-related protein 5 (PR-5)
ruditapes2_lrc5624	oxygen transport	transport	P	Arylphorin subunit C223
ruditapes2_lrc5624	transport	transport	P	Arylphorin subunit C223
ruditapes_c32067	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase (CDPK) (EC 2.7.11.1)
ruditapes_c32067	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase (CDPK) (EC 2.7.11.1)
ruditapes_c15504	positive regulation of cell adhesion	cell adhesion	P	CD63 antigen (Mast cell antigen AD1) (CD antigen CD63)
ruditapes_c15504	positive regulation of endocytosis	transport	P	CD63 antigen (Mast cell antigen AD1) (CD antigen CD63)
ruditapes_c15504	positive regulation of endocytosis	cell organization and biogenesis	P	CD63 antigen (Mast cell antigen AD1) (CD antigen CD63)
ruditapes_c15504	negative regulation of epithelial cell migration	other biological processes	P	CD63 antigen (Mast cell antigen AD1) (CD antigen CD63)
ruditapes_c15504	epithelial cell differentiation	developmental processes	P	CD63 antigen (Mast cell antigen AD1) (CD antigen CD63)
ruditapes2_c5179	negative regulation of peptidase activity	other biological processes	P	Murinoglobulin-1 (MuG1)
ruditapes2_c5179	negative regulation of endopeptidase activity	other biological processes	P	Murinoglobulin-1 (MuG1)
ruditapes_c13376	prolyl-tRNA aminoacylation	protein metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c13376	prolyl-tRNA aminoacylation	RNA metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c21306	glutamyl-tRNA aminoacylation	protein metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c21306	glutamyl-tRNA aminoacylation	RNA metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c21306	prolyl-tRNA aminoacylation	protein metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c21306	prolyl-tRNA aminoacylation	RNA metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c13376	tRNA aminoacylation	RNA metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c13376	metabolic process	other metabolic processes	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c13376	tRNA aminoacylation for protein translation	protein metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c13376	tRNA aminoacylation for protein translation	RNA metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c13376	translation	protein metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c21306	translation	protein metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c21306	metabolic process	other metabolic processes	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c21306	tRNA aminoacylation	RNA metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c21306	tRNA aminoacylation for protein translation	protein metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c21306	tRNA aminoacylation for protein translation	RNA metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c13376	glutamyl-tRNA aminoacylation	protein metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c13376	glutamyl-tRNA aminoacylation	RNA metabolism	P	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]
ruditapes_c14217	membrane fusion	cell organization and biogenesis	P	Grancalcin
ruditapes2_c1795	cell-matrix adhesion	cell adhesion	P	Ependymin-1 (Ependymin I) (EPD-I)
ruditapes_c24971	protein transport	transport	P	Protein transport protein SEC20
ruditapes_c24971	vesicle-mediated transport	transport	P	Protein transport protein SEC20
ruditapes_c24971	vesicle fusion with endoplasmic reticulum	transport	P	Protein transport protein SEC20
ruditapes_c24971	vesicle fusion with endoplasmic reticulum	cell organization and biogenesis	P	Protein transport protein SEC20
ruditapes_c24971	transport	transport	P	Protein transport protein SEC20
ruditapes_c24971	"retrograde vesicle-mediated transport, Golgi to ER"	transport	P	Protein transport protein SEC20
ruditapes2_c334	negative regulation of JUN kinase activity	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	negative regulation of JUN kinase activity	stress response	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	negative regulation of JUN kinase activity	protein metabolism	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	negative regulation of interleukin-1 beta production	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	negative regulation of MAP kinase activity	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	negative regulation of protein kinase activity	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	negative regulation of apoptosis	death	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	negative regulation of biosynthetic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	negative regulation of nitric-oxide synthase biosynthetic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	negative regulation of tumor necrosis factor production	other biological processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes2_c334	xenobiotic metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes_c17350	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase mu (Protein-tyrosine phosphatase mu) (R-PTP-mu) (EC 3.1.3.48)
ruditapes_c17350	cell adhesion	cell adhesion	P	Receptor-type tyrosine-protein phosphatase mu (Protein-tyrosine phosphatase mu) (R-PTP-mu) (EC 3.1.3.48)
ruditapes_c17350	positive regulation of vasodilation	other biological processes	P	Receptor-type tyrosine-protein phosphatase mu (Protein-tyrosine phosphatase mu) (R-PTP-mu) (EC 3.1.3.48)
ruditapes_c17350	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase mu (Protein-tyrosine phosphatase mu) (R-PTP-mu) (EC 3.1.3.48)
ruditapes_c15821	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c15821	"transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c12258	neurogenesis	developmental processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to glucocorticoid stimulus	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	pancreas development	developmental processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	peptide biosynthetic process	other metabolic processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to organic cyclic substance	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to calcium ion	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to fatty acid	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to glucose stimulus	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to axon injury	stress response	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	proteolysis	protein metabolism	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	protein autoprocessing	protein metabolism	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	protein processing	protein metabolism	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	positive regulation of protein secretion	transport	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	embryonic development	developmental processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to drug	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to drug	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	embryonic development	developmental processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to inorganic substance	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to interleukin-1	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to peptide hormone stimulus	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to nutrient levels	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to glucocorticoid stimulus	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to chlorate	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to fatty acid	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to chlorate	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	protein processing	protein metabolism	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	protein autoprocessing	protein metabolism	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to glucose stimulus	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to axon injury	stress response	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to lipopolysaccharide	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to calcium ion	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	positive regulation of protein secretion	transport	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to interleukin-1	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to lipopolysaccharide	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to peptide hormone stimulus	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	proteolysis	protein metabolism	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	peptide hormone processing	protein metabolism	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to inorganic substance	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to morphine	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to morphine	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	neurogenesis	developmental processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	pancreas development	developmental processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	peptide biosynthetic process	other metabolic processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	peptide hormone processing	protein metabolism	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	response to nutrient levels	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	pituitary gland development	developmental processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c12258	response to organic cyclic substance	other biological processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c10265	pituitary gland development	developmental processes	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Prohormone convertase 1) (Proprotein convertase 1) (PC1)
ruditapes_c8657	metabolic process	other metabolic processes	P	Stromelysin-1 (SL-1) (EC 3.4.24.17) (Matrix metalloproteinase-3) (MMP-3) (Transin-1)
ruditapes_c8657	collagen catabolic process	other metabolic processes	P	Stromelysin-1 (SL-1) (EC 3.4.24.17) (Matrix metalloproteinase-3) (MMP-3) (Transin-1)
ruditapes_c8657	proteolysis	protein metabolism	P	Stromelysin-1 (SL-1) (EC 3.4.24.17) (Matrix metalloproteinase-3) (MMP-3) (Transin-1)
ruditapes_c25046	signal transduction	signal transduction	P	Guanine nucleotide-binding protein subunit alpha
ruditapes_c25046	G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit alpha
ruditapes_c29458	regulation of pH	other biological processes	P	Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)
ruditapes_c29458	cation transport	transport	P	Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)
ruditapes_c29458	metabolic process	other metabolic processes	P	Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)
ruditapes_c29458	ion transport	transport	P	Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)
ruditapes_c29458	proton transport	transport	P	Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)
ruditapes_c29458	ATP biosynthetic process	other metabolic processes	P	Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)
ruditapes_c29458	ATP catabolic process	other metabolic processes	P	Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)
ruditapes_c29458	transport	transport	P	Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)
ruditapes_c25239	ATP biosynthetic process	other metabolic processes	P	Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)
ruditapes_c25239	proton transport	transport	P	Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)
ruditapes_c25239	transport	transport	P	Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)
ruditapes_c25239	ion transport	transport	P	Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)
ruditapes_c25239	metabolic process	other metabolic processes	P	Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)
ruditapes_c25239	cation transport	transport	P	Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)
ruditapes_c25239	ATP catabolic process	other metabolic processes	P	Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)
ruditapes_c24911	pathogenesis	other biological processes	P	Omega-conotoxin SVIB (SNX-183)
ruditapes_c2192	polysaccharide catabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_c2192	carbohydrate metabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_c2192	metabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_lrc35066	metabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_lrc35066	chitin metabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_lrc35066	carbohydrate metabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_c2192	chitin metabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_c1277	chitin metabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_lrc35066	chitin catabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_lrc35066	polysaccharide catabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_c2192	chitin catabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_c1277	carbohydrate metabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_c1277	metabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_c1277	polysaccharide catabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_c1277	chitin catabolic process	other metabolic processes	P	Endochitinase (EC 3.2.1.14) (MF1 antigen)
ruditapes_c23809	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)
ruditapes_c23809	viral genome replication	other biological processes	P	RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)
ruditapes_c23809	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)
ruditapes_c7235	transcription initiation	RNA metabolism	P	Transcription initiation factor IIB (General transcription factor TFIIB)
ruditapes_c7235	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor IIB (General transcription factor TFIIB)
ruditapes_c7235	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor IIB (General transcription factor TFIIB)
ruditapes_c7235	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor IIB (General transcription factor TFIIB)
ruditapes_c7235	translational initiation	protein metabolism	P	Transcription initiation factor IIB (General transcription factor TFIIB)
ruditapes_s40349	regulation of apoptosis	death	P	"Peptidyl-prolyl cis-trans isomerase F, mitochondrial (PPIase F) (EC 5.2.1.8) (Cyclophilin D) (CyP-D) (CypD) (Cyclophilin F) (Rotamase F)"
ruditapes_s40349	protein peptidyl-prolyl isomerization	protein metabolism	P	"Peptidyl-prolyl cis-trans isomerase F, mitochondrial (PPIase F) (EC 5.2.1.8) (Cyclophilin D) (CyP-D) (CypD) (Cyclophilin F) (Rotamase F)"
ruditapes_s40349	apoptotic mitochondrial changes	cell organization and biogenesis	P	"Peptidyl-prolyl cis-trans isomerase F, mitochondrial (PPIase F) (EC 5.2.1.8) (Cyclophilin D) (CyP-D) (CypD) (Cyclophilin F) (Rotamase F)"
ruditapes_s40349	apoptotic mitochondrial changes	death	P	"Peptidyl-prolyl cis-trans isomerase F, mitochondrial (PPIase F) (EC 5.2.1.8) (Cyclophilin D) (CyP-D) (CypD) (Cyclophilin F) (Rotamase F)"
ruditapes_s40349	protein folding	protein metabolism	P	"Peptidyl-prolyl cis-trans isomerase F, mitochondrial (PPIase F) (EC 5.2.1.8) (Cyclophilin D) (CyP-D) (CypD) (Cyclophilin F) (Rotamase F)"
ruditapes_s40349	regulation of mitochondrial membrane permeability	transport	P	"Peptidyl-prolyl cis-trans isomerase F, mitochondrial (PPIase F) (EC 5.2.1.8) (Cyclophilin D) (CyP-D) (CypD) (Cyclophilin F) (Rotamase F)"
ruditapes_s40349	regulation of mitochondrial membrane permeability	cell organization and biogenesis	P	"Peptidyl-prolyl cis-trans isomerase F, mitochondrial (PPIase F) (EC 5.2.1.8) (Cyclophilin D) (CyP-D) (CypD) (Cyclophilin F) (Rotamase F)"
ruditapes_c29485	gluconeogenesis	other metabolic processes	P	Phosphoenolpyruvate carboxykinase [GTP] (PEPCK) (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase)
ruditapes_c23167	single fertilization	other biological processes	P	ADP-ribosyl cyclase (ADRC) (EC 3.2.2.5) (NAD glycohydrolase) (NAD(+) nucleosidase) (NADase)
ruditapes_c3007	oxidation reduction	other metabolic processes	P	Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PsaA)
ruditapes_c3007	protein-chromophore linkage	protein metabolism	P	Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PsaA)
ruditapes_c3007	transport	transport	P	Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PsaA)
ruditapes_c3007	photosynthesis	other metabolic processes	P	Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PsaA)
ruditapes_c3007	electron transport chain	other metabolic processes	P	Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PsaA)
ruditapes_s40032	translation	protein metabolism	P	40S ribosomal protein S9
ruditapes_s40032	biological_process	other biological processes	P	40S ribosomal protein S9
ruditapes_c1408	regulation of epithelial to mesenchymal transition	developmental processes	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	regulation of epithelial to mesenchymal transition	cell organization and biogenesis	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	ephrin receptor signaling pathway	signal transduction	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	regulation of microtubule cytoskeleton organization	cell organization and biogenesis	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	regulation of focal adhesion formation	cell adhesion	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	axonal fasciculation	developmental processes	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	axonal fasciculation	cell organization and biogenesis	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	cell migration	other biological processes	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	phosphorylation	other metabolic processes	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	regulation of focal adhesion formation	cell organization and biogenesis	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	regulation of actin cytoskeleton organization	cell organization and biogenesis	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	regulation of Rho GTPase activity	signal transduction	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	apoptosis	death	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	protein amino acid phosphorylation	protein metabolism	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c1408	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Ephrin type-A receptor 3 (EC 2.7.10.1) (EPH-like kinase 4) (EK4) (cEK4) (Tyrosine-protein kinase receptor ETK1)
ruditapes_c25485	bioluminescence	other metabolic processes	P	Long-chain-fatty-acid--luciferin-component ligase (EC 6.2.1.19) (Acyl-protein synthetase)
ruditapes_c18666	rhodopsin mediated phototransduction	other biological processes	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	response to stimulus	other biological processes	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	sensory perception of taste	other biological processes	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	sensory perception of umami taste	other biological processes	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	sensory perception of bitter taste	other biological processes	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	GTP catabolic process	other metabolic processes	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	detection of chemical stimulus involved in sensory perception of bitter taste	other biological processes	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	signal transduction	signal transduction	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	sensory perception of sweet taste	other biological processes	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	visual perception	other biological processes	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	response to nicotine	other biological processes	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_c18666	"G-protein signaling, coupled to cAMP nucleotide second messenger"	signal transduction	P	Guanine nucleotide-binding protein G(t) subunit alpha-3 (Gustducin alpha-3 chain)
ruditapes_lrc28900	open tracheal system development	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	sevenless signaling pathway	signal transduction	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	sevenless signaling pathway	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	mitotic cell cycle	cell cycle and proliferation	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	dephosphorylation	other metabolic processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	"determination of anterior/posterior axis, embryo"	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	mesoderm development	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	fibroblast growth factor receptor signaling pathway	signal transduction	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	torso signaling pathway	signal transduction	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	"dorsal/ventral axis specification, ovarian follicular epithelium"	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	"dorsal/ventral axis specification, ovarian follicular epithelium"	cell organization and biogenesis	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	terminal region determination	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	ventral midline development	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	"primary branching, open tracheal system"	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	"epithelial cell migration, open tracheal system"	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	R7 cell fate commitment	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	regulation of compound eye photoreceptor development	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	imaginal disc development	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	protein amino acid dephosphorylation	protein metabolism	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	epidermal growth factor receptor signaling pathway	signal transduction	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_lrc28900	multicellular organismal development	developmental processes	P	Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)
ruditapes_c18697	cell proliferation	cell cycle and proliferation	P	Leukocyte tyrosine kinase receptor (EC 2.7.10.1) (Protein tyrosine kinase 1)
ruditapes_c18697	protein amino acid phosphorylation	protein metabolism	P	Leukocyte tyrosine kinase receptor (EC 2.7.10.1) (Protein tyrosine kinase 1)
ruditapes_c18697	positive regulation of neuron projection development	developmental processes	P	Leukocyte tyrosine kinase receptor (EC 2.7.10.1) (Protein tyrosine kinase 1)
ruditapes_c18697	positive regulation of neuron projection development	cell organization and biogenesis	P	Leukocyte tyrosine kinase receptor (EC 2.7.10.1) (Protein tyrosine kinase 1)
ruditapes_c18697	signal transduction	signal transduction	P	Leukocyte tyrosine kinase receptor (EC 2.7.10.1) (Protein tyrosine kinase 1)
ruditapes_c18697	phosphorylation	other metabolic processes	P	Leukocyte tyrosine kinase receptor (EC 2.7.10.1) (Protein tyrosine kinase 1)
ruditapes_c18697	phosphoinositide 3-kinase cascade	signal transduction	P	Leukocyte tyrosine kinase receptor (EC 2.7.10.1) (Protein tyrosine kinase 1)
ruditapes_c18697	apoptosis	death	P	Leukocyte tyrosine kinase receptor (EC 2.7.10.1) (Protein tyrosine kinase 1)
ruditapes_c18697	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Leukocyte tyrosine kinase receptor (EC 2.7.10.1) (Protein tyrosine kinase 1)
ruditapes2_c2633	axon guidance	developmental processes	P	Collagen alpha-5(IV) chain
ruditapes2_c2633	axon guidance	cell organization and biogenesis	P	Collagen alpha-5(IV) chain
ruditapes_c23356	response to stimulus	other biological processes	P	Opsin Rh4 (Inner R7 photoreceptor cells opsin)
ruditapes_c23356	visual perception	other biological processes	P	Opsin Rh4 (Inner R7 photoreceptor cells opsin)
ruditapes_c23356	signal transduction	signal transduction	P	Opsin Rh4 (Inner R7 photoreceptor cells opsin)
ruditapes_c23356	protein-chromophore linkage	protein metabolism	P	Opsin Rh4 (Inner R7 photoreceptor cells opsin)
ruditapes_c23356	G-protein coupled receptor protein signaling pathway	signal transduction	P	Opsin Rh4 (Inner R7 photoreceptor cells opsin)
ruditapes_c23356	phototransduction	other biological processes	P	Opsin Rh4 (Inner R7 photoreceptor cells opsin)
ruditapes_c16791	oxidation reduction	other metabolic processes	P	Catalase (EC 1.11.1.6)
ruditapes_c16791	hydrogen peroxide catabolic process	stress response	P	Catalase (EC 1.11.1.6)
ruditapes_c16791	hydrogen peroxide catabolic process	other metabolic processes	P	Catalase (EC 1.11.1.6)
ruditapes_c16791	response to oxidative stress	stress response	P	Catalase (EC 1.11.1.6)
ruditapes2_c2661	transport	transport	P	Thioredoxin (Trx)
ruditapes2_c2661	glycerol ether metabolic process	other metabolic processes	P	Thioredoxin (Trx)
ruditapes2_c2661	cell redox homeostasis	other biological processes	P	Thioredoxin (Trx)
ruditapes2_c2661	electron transport chain	other metabolic processes	P	Thioredoxin (Trx)
ruditapes_c30177	glycerol ether metabolic process	other metabolic processes	P	Thioredoxin-2 (Trx-2) (Fragment)
ruditapes_c30177	cell redox homeostasis	other biological processes	P	Thioredoxin-2 (Trx-2) (Fragment)
ruditapes_c30177	electron transport chain	other metabolic processes	P	Thioredoxin-2 (Trx-2) (Fragment)
ruditapes_c30177	transport	transport	P	Thioredoxin-2 (Trx-2) (Fragment)
ruditapes2_c1857	transport	transport	P	Thioredoxin (Trx)
ruditapes2_c1857	positive regulation of DNA binding	other biological processes	P	Thioredoxin (Trx)
ruditapes2_c1857	response to radiation	other biological processes	P	Thioredoxin (Trx)
ruditapes2_c1857	"transcription, DNA-dependent"	RNA metabolism	P	Thioredoxin (Trx)
ruditapes2_c1857	"regulation of protein import into nucleus, translocation"	transport	P	Thioredoxin (Trx)
ruditapes2_c1857	glycerol ether metabolic process	other metabolic processes	P	Thioredoxin (Trx)
ruditapes2_c1857	electron transport chain	other metabolic processes	P	Thioredoxin (Trx)
ruditapes2_c1857	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Thioredoxin (Trx)
ruditapes2_c1857	cell redox homeostasis	other biological processes	P	Thioredoxin (Trx)
ruditapes2_c1857	oxidation reduction	other metabolic processes	P	Thioredoxin (Trx)
ruditapes_c23388	mRNA polyadenylation	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (Polynucleotide adenylyltransferase)
ruditapes_c23388	RNA 3'-end processing	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (Polynucleotide adenylyltransferase)
ruditapes_c25941	mRNA polyadenylation	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (Polynucleotide adenylyltransferase)
ruditapes_c25941	RNA 3'-end processing	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (Polynucleotide adenylyltransferase)
ruditapes_c23388	"transcription, DNA-dependent"	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (Polynucleotide adenylyltransferase)
ruditapes_c23388	RNA polyadenylation	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (Polynucleotide adenylyltransferase)
ruditapes_c25941	mRNA processing	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (Polynucleotide adenylyltransferase)
ruditapes_c25941	"transcription, DNA-dependent"	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (Polynucleotide adenylyltransferase)
ruditapes_c23388	mRNA processing	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (Polynucleotide adenylyltransferase)
ruditapes_c25941	RNA polyadenylation	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (Polynucleotide adenylyltransferase)
ruditapes_s40094	translation	protein metabolism	P	Ubiquitin-40S ribosomal protein S27a [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc15460	translation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes_lrc15460	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes_lrc15460	translational elongation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes_c36087	translation	protein metabolism	P	Elongation factor 1-beta'
ruditapes_c36087	translational elongation	protein metabolism	P	Elongation factor 1-beta'
ruditapes2_c2744	induction of apoptosis via death domain receptors	death	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	JNK cascade	signal transduction	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	JNK cascade	stress response	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	defense response to bacterium	stress response	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of chemokine production	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	sequestering of triglyceride	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	leukocyte tethering or rolling	cell adhesion	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	induction of necroptosis by extracellular signals	death	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of protein kinase B signaling cascade	signal transduction	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of heterotypic cell-cell adhesion	developmental processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of heterotypic cell-cell adhesion	cell adhesion	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	multicellular organismal development	developmental processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of JNK cascade	signal transduction	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of JNK cascade	stress response	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of protein complex assembly	cell organization and biogenesis	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	negative regulation of glucose import	transport	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of osteoclast differentiation	developmental processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	regulation of insulin secretion	transport	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	regulation of insulin secretion	cell-cell signaling	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	leukocyte migration	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	negative regulation of cytokine secretion during immune response	transport	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	negative regulation of lipid catabolic process	other metabolic processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	defense response to Gram-positive bacterium	stress response	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	regulation of osteoclast differentiation	developmental processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	immune response	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	embryonic gut development	developmental processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	glucose metabolic process	other metabolic processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of interleukin-6 production	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	osteoclast differentiation	developmental processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of chronic inflammatory response to antigenic stimulus	stress response	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of protein transport	transport	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	tumor necrosis factor-mediated signaling pathway	signal transduction	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	extracellular matrix organization	cell organization and biogenesis	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	negative regulation of apoptosis	death	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	cellular extravasation	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	apoptosis	death	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	regulation of branching involved in salivary gland morphogenesis	developmental processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	negative regulation of interleukin-6 production	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of chemokine biosynthetic process	other metabolic processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of membrane protein ectodomain proteolysis	protein metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	response to virus	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	chronic inflammatory response to antigenic stimulus	stress response	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of protein amino acid phosphorylation	protein metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	defense response	stress response	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	necrotic cell death	death	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of translational initiation by iron	protein metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	epithelial cell proliferation involved in salivary gland morphogenesis	cell cycle and proliferation	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	epithelial cell proliferation involved in salivary gland morphogenesis	developmental processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	transformed cell apoptosis	death	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	induction of apoptosis	death	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	activation of MAPKKK activity	signal transduction	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	activation of MAPKKK activity	other metabolic processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of calcidiol 1-monooxygenase activity	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of cytokine secretion	transport	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of hair follicle development	developmental processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	organ morphogenesis	developmental processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	activation of MAPK activity	signal transduction	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	activation of MAPK activity	protein metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	inflammatory response	stress response	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of interferon-gamma production	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	regulation of cell proliferation	cell cycle and proliferation	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of protein complex disassembly	cell organization and biogenesis	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of MAP kinase activity	other metabolic processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	regulation of immunoglobulin secretion	transport	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	response to glucocorticoid stimulus	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of humoral immune response mediated by circulating immunoglobulin	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of vitamin D biosynthetic process	other metabolic processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of transcription factor activity	RNA metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	activation of caspase activity	death	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	regulation of protein amino acid phosphorylation	protein metabolism	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	receptor biosynthetic process	other metabolic processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	"protein import into nucleus, translocation"	transport	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of NF-kappaB import into nucleus	transport	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	humoral immune response	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of fever	stress response	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of cytokine production	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	negative regulation of viral genome replication	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	anti-apoptosis	death	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	positive regulation of NFAT protein import into nucleus	transport	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	induction of apoptosis by extracellular signals	death	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes2_c2744	regulation of protein secretion	transport	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes_c26551	regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4E-1 (eIF-4E-1) (eIF4E-1) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) (mRNA cap-binding protein)
ruditapes_c26551	translation	protein metabolism	P	Eukaryotic translation initiation factor 4E-1 (eIF-4E-1) (eIF4E-1) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) (mRNA cap-binding protein)
ruditapes_c26551	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 4E-1 (eIF-4E-1) (eIF4E-1) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) (mRNA cap-binding protein)
ruditapes_c25507	positive regulation of apoptosis	death	P	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]
ruditapes_c25507	luteolysis	developmental processes	P	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]
ruditapes_c25507	apoptosis	death	P	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]
ruditapes_c25507	brain development	developmental processes	P	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]
ruditapes_c25507	proteolysis	protein metabolism	P	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]
ruditapes_c25507	aging	other biological processes	P	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]
ruditapes_c25507	induction of apoptosis	death	P	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]
ruditapes_c25507	regulation of apoptosis	death	P	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]
ruditapes_c25507	positive regulation of neuron apoptosis	death	P	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]
ruditapes_c25507	protein processing	protein metabolism	P	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]
ruditapes_c16949	negative regulation of endopeptidase activity	other biological processes	P	Serine protease inhibitor A3C (Serpin A3C) (Kallikrein-binding protein) (KBP)
ruditapes_c16949	response to peptide hormone stimulus	other biological processes	P	Serine protease inhibitor A3C (Serpin A3C) (Kallikrein-binding protein) (KBP)
ruditapes_c16949	regulation of proteolysis	protein metabolism	P	Serine protease inhibitor A3C (Serpin A3C) (Kallikrein-binding protein) (KBP)
ruditapes_c16949	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor A3C (Serpin A3C) (Kallikrein-binding protein) (KBP)
ruditapes_c16949	response to cytokine stimulus	other biological processes	P	Serine protease inhibitor A3C (Serpin A3C) (Kallikrein-binding protein) (KBP)
ruditapes_c13028	axis specification	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	chordate embryonic development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	gastrulation	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	muscle organ development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	multicellular organismal development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	cell differentiation	other biological processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	cell migration involved in gastrulation	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	anterior/posterior pattern formation	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	neurogenesis	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	"transcription, DNA-dependent"	RNA metabolism	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	pronephros development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	"regulation of transcription, DNA-dependent"	RNA metabolism	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	nervous system development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	regionalization	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	notochord development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes_c13028	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (Xlim1) (x-Lhx1) (xLIM-1)
ruditapes2_c821	reproduction	other biological processes	P	Elongation factor 2 (EF-2)
ruditapes_c1495	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes2_c821	growth	other biological processes	P	Elongation factor 2 (EF-2)
ruditapes2_c821	hermaphrodite genitalia development	developmental processes	P	Elongation factor 2 (EF-2)
ruditapes2_c821	apoptosis	death	P	Elongation factor 2 (EF-2)
ruditapes_c1495	apoptosis	death	P	Elongation factor 2 (EF-2)
ruditapes2_c821	embryonic development ending in birth or egg hatching	developmental processes	P	Elongation factor 2 (EF-2)
ruditapes_c1880	oogenesis	other biological processes	P	Elongation factor 2 (EF-2)
ruditapes_c1495	embryonic development ending in birth or egg hatching	developmental processes	P	Elongation factor 2 (EF-2)
ruditapes_c1880	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c1495	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c1495	oogenesis	other biological processes	P	Elongation factor 2 (EF-2)
ruditapes2_c821	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c1495	nematode larval development	developmental processes	P	Elongation factor 2 (EF-2)
ruditapes_c1880	embryonic development ending in birth or egg hatching	developmental processes	P	Elongation factor 2 (EF-2)
ruditapes_c1880	growth	other biological processes	P	Elongation factor 2 (EF-2)
ruditapes_c1880	reproduction	other biological processes	P	Elongation factor 2 (EF-2)
ruditapes_c1880	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c1880	nematode larval development	developmental processes	P	Elongation factor 2 (EF-2)
ruditapes2_c821	nematode larval development	developmental processes	P	Elongation factor 2 (EF-2)
ruditapes2_c821	oogenesis	other biological processes	P	Elongation factor 2 (EF-2)
ruditapes_c1495	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes2_c821	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes_c1880	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes_c1880	hermaphrodite genitalia development	developmental processes	P	Elongation factor 2 (EF-2)
ruditapes_c1495	growth	other biological processes	P	Elongation factor 2 (EF-2)
ruditapes_c1880	apoptosis	death	P	Elongation factor 2 (EF-2)
ruditapes2_c821	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c1495	reproduction	other biological processes	P	Elongation factor 2 (EF-2)
ruditapes_c1495	hermaphrodite genitalia development	developmental processes	P	Elongation factor 2 (EF-2)
ruditapes2_c2796	translational elongation	protein metabolism	P	Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)
ruditapes2_c2796	translation	protein metabolism	P	Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)
ruditapes_c25806	type I interferon-mediated signaling pathway	signal transduction	P	2'-5'-oligoadenylate synthase 2 ((2-5')oligo(A) synthase 2) (2-5A synthase 2) (EC 2.7.7.84) (p69 OAS / p71 OAS) (p69OAS / p71OAS)
ruditapes_c25806	RNA catabolic process	RNA metabolism	P	2'-5'-oligoadenylate synthase 2 ((2-5')oligo(A) synthase 2) (2-5A synthase 2) (EC 2.7.7.84) (p69 OAS / p71 OAS) (p69OAS / p71OAS)
ruditapes_c25806	interferon-gamma-mediated signaling pathway	signal transduction	P	2'-5'-oligoadenylate synthase 2 ((2-5')oligo(A) synthase 2) (2-5A synthase 2) (EC 2.7.7.84) (p69 OAS / p71 OAS) (p69OAS / p71OAS)
ruditapes_c25806	purine nucleotide biosynthetic process	other metabolic processes	P	2'-5'-oligoadenylate synthase 2 ((2-5')oligo(A) synthase 2) (2-5A synthase 2) (EC 2.7.7.84) (p69 OAS / p71 OAS) (p69OAS / p71OAS)
ruditapes_c25806	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	2'-5'-oligoadenylate synthase 2 ((2-5')oligo(A) synthase 2) (2-5A synthase 2) (EC 2.7.7.84) (p69 OAS / p71 OAS) (p69OAS / p71OAS)
ruditapes_c25806	immune response	other biological processes	P	2'-5'-oligoadenylate synthase 2 ((2-5')oligo(A) synthase 2) (2-5A synthase 2) (EC 2.7.7.84) (p69 OAS / p71 OAS) (p69OAS / p71OAS)
ruditapes_c25806	cytokine-mediated signaling pathway	signal transduction	P	2'-5'-oligoadenylate synthase 2 ((2-5')oligo(A) synthase 2) (2-5A synthase 2) (EC 2.7.7.84) (p69 OAS / p71 OAS) (p69OAS / p71OAS)
ruditapes_c21964	DNA restriction-modification system	DNA metabolism	P	Type-2 restriction enzyme TthHB8I (R.TthHB8I) (EC 3.1.21.4) (Endonuclease TthHB8I) (Type II restriction enzyme TthHB8I)
ruditapes2_c2372	carbohydrate metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c2372	metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c10390	"regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA-binding protein D-ETS-4
ruditapes2_lrc4941	digestion	other biological processes	P	Trypsin 3A1 (EC 3.4.21.4)
ruditapes2_lrc4941	proteolysis	protein metabolism	P	Trypsin 3A1 (EC 3.4.21.4)
ruditapes_c13352	glycerol ether metabolic process	other metabolic processes	P	Protein disulfide-isomerase (PDI) (EC 5.3.4.1)
ruditapes_c13352	cell redox homeostasis	other biological processes	P	Protein disulfide-isomerase (PDI) (EC 5.3.4.1)
ruditapes2_c3901	respiratory electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes2_c3901	transport	transport	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes2_c3901	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes2_c3901	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c11872	ATP synthesis coupled electron transport	other metabolic processes	P	"NADH-quinone oxidoreductase chain 12 (EC 1.6.99.5) (NADH dehydrogenase I, chain 12) (NDH-1, chain 12)"
ruditapes_c11872	oxidation reduction	other metabolic processes	P	"NADH-quinone oxidoreductase chain 12 (EC 1.6.99.5) (NADH dehydrogenase I, chain 12) (NDH-1, chain 12)"
ruditapes_c7745	carbohydrate metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c30115	carbohydrate metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c8780	metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c7745	metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c8780	carbohydrate metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c11847	metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c11847	carbohydrate metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c30115	metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c28891	visual perception	other biological processes	P	"cGMP-gated cation channel alpha-1 (Cyclic nucleotide-gated cation channel 1) (Cyclic nucleotide-gated channel alpha-1) (CNG channel alpha-1) (CNG-1) (CNG1) (Cyclic nucleotide-gated channel, photoreceptor) (Rod photoreceptor cGMP-gated channel subunit alpha)"
ruditapes_c28891	ion transport	transport	P	"cGMP-gated cation channel alpha-1 (Cyclic nucleotide-gated cation channel 1) (Cyclic nucleotide-gated channel alpha-1) (CNG channel alpha-1) (CNG-1) (CNG1) (Cyclic nucleotide-gated channel, photoreceptor) (Rod photoreceptor cGMP-gated channel subunit alpha)"
ruditapes_c28891	response to stimulus	other biological processes	P	"cGMP-gated cation channel alpha-1 (Cyclic nucleotide-gated cation channel 1) (Cyclic nucleotide-gated channel alpha-1) (CNG channel alpha-1) (CNG-1) (CNG1) (Cyclic nucleotide-gated channel, photoreceptor) (Rod photoreceptor cGMP-gated channel subunit alpha)"
ruditapes_c28891	transport	transport	P	"cGMP-gated cation channel alpha-1 (Cyclic nucleotide-gated cation channel 1) (Cyclic nucleotide-gated channel alpha-1) (CNG channel alpha-1) (CNG-1) (CNG1) (Cyclic nucleotide-gated channel, photoreceptor) (Rod photoreceptor cGMP-gated channel subunit alpha)"
ruditapes_c28891	transmembrane transport	transport	P	"cGMP-gated cation channel alpha-1 (Cyclic nucleotide-gated cation channel 1) (Cyclic nucleotide-gated channel alpha-1) (CNG channel alpha-1) (CNG-1) (CNG1) (Cyclic nucleotide-gated channel, photoreceptor) (Rod photoreceptor cGMP-gated channel subunit alpha)"
ruditapes_c11455	viral infectious cycle	other biological processes	P	Genome polyprotein [Cleaved into: Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1)] (Fragment)
ruditapes_c11455	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1)] (Fragment)
ruditapes_c29304	ion transport	transport	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	flight behavior	other biological processes	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	visual perception	other biological processes	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	response to stimulus	other biological processes	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	inositol phosphate-mediated signaling	signal transduction	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	response to oxidative stress	stress response	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	cellular calcium ion homeostasis	other biological processes	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	"molting cycle, chitin-based cuticle"	other biological processes	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	multicellular organismal development	developmental processes	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	transmembrane transport	transport	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	calcium ion transport	transport	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	larval feeding behavior	other biological processes	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	transmembrane calcium ion transport	transport	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	mushroom body development	developmental processes	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	sensory perception of smell	other biological processes	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	stabilization of membrane potential	other biological processes	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	nuclear division	cell organization and biogenesis	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	release of sequestered calcium ion into cytosol	transport	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	transport	transport	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c29304	sensory perception of taste	other biological processes	P	"Inositol 1,4,5-trisphosphate receptor (InsP3 receptor) (IP3R) (InsP3R)"
ruditapes_c25899	transport	transport	P	"Inositol 1,4,5-trisphosphate receptor type 2 (IP3 receptor isoform 2) (IP3R 2) (InsP3R2) (Type 2 inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3 receptor)"
ruditapes_c25899	calcium ion transport	transport	P	"Inositol 1,4,5-trisphosphate receptor type 2 (IP3 receptor isoform 2) (IP3R 2) (InsP3R2) (Type 2 inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3 receptor)"
ruditapes_c25899	transmembrane transport	transport	P	"Inositol 1,4,5-trisphosphate receptor type 2 (IP3 receptor isoform 2) (IP3R 2) (InsP3R2) (Type 2 inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3 receptor)"
ruditapes_c25899	inositol phosphate-mediated signaling	signal transduction	P	"Inositol 1,4,5-trisphosphate receptor type 2 (IP3 receptor isoform 2) (IP3R 2) (InsP3R2) (Type 2 inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3 receptor)"
ruditapes_c25899	transmembrane calcium ion transport	transport	P	"Inositol 1,4,5-trisphosphate receptor type 2 (IP3 receptor isoform 2) (IP3R 2) (InsP3R2) (Type 2 inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3 receptor)"
ruditapes_c25899	response to hypoxia	stress response	P	"Inositol 1,4,5-trisphosphate receptor type 2 (IP3 receptor isoform 2) (IP3R 2) (InsP3R2) (Type 2 inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3 receptor)"
ruditapes_c25899	ion transport	transport	P	"Inositol 1,4,5-trisphosphate receptor type 2 (IP3 receptor isoform 2) (IP3R 2) (InsP3R2) (Type 2 inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3 receptor)"
ruditapes2_c1331	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L12
ruditapes2_c1331	translational termination	protein metabolism	P	60S ribosomal protein L12
ruditapes2_c1331	translational termination	cell organization and biogenesis	P	60S ribosomal protein L12
ruditapes2_c1331	translational elongation	protein metabolism	P	60S ribosomal protein L12
ruditapes2_c1331	translational initiation	protein metabolism	P	60S ribosomal protein L12
ruditapes2_c1331	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L12
ruditapes2_c1331	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L12
ruditapes2_c1331	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L12
ruditapes2_c1331	viral reproduction	other biological processes	P	60S ribosomal protein L12
ruditapes2_c1331	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L12
ruditapes2_c1331	viral infectious cycle	other biological processes	P	60S ribosomal protein L12
ruditapes2_c1331	gene expression	other metabolic processes	P	60S ribosomal protein L12
ruditapes2_c1331	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes2_c1331	viral transcription	RNA metabolism	P	60S ribosomal protein L12
ruditapes_lrc35548	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta) (p30)
ruditapes_lrc35548	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta) (p30)
ruditapes_c8095	interspecies interaction between organisms	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1] (Fragment)
ruditapes_c8095	pathogenesis	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1] (Fragment)
ruditapes_c8095	viral envelope fusion with host membrane	cell organization and biogenesis	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1] (Fragment)
ruditapes_c21981	viral infectious cycle	other biological processes	P	Outer capsid protein VP4 (Hemagglutinin) [Cleaved into: Outer capsid protein VP8*; Outer capsid protein VP5*]
ruditapes_c21981	interspecies interaction between organisms	other biological processes	P	Outer capsid protein VP4 (Hemagglutinin) [Cleaved into: Outer capsid protein VP8*; Outer capsid protein VP5*]
ruditapes_c18486	cell cycle	cell cycle and proliferation	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	"DNA replication, removal of RNA primer"	RNA metabolism	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	"DNA replication, removal of RNA primer"	DNA metabolism	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	regulation of mitotic cell cycle	cell cycle and proliferation	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	mitosis	cell cycle and proliferation	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	mitosis	cell organization and biogenesis	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	telomere maintenance	cell organization and biogenesis	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	cell division	other biological processes	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	DNA strand elongation during DNA replication	DNA metabolism	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	cellular protein localization	other biological processes	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	DNA replication	DNA metabolism	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	DNA synthesis during DNA repair	stress response	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	DNA synthesis during DNA repair	DNA metabolism	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c18486	telomere maintenance	DNA metabolism	P	DNA polymerase delta subunit 3 (Cell division control protein 27)
ruditapes_c23206	protein amino acid phosphorylation	protein metabolism	P	G1/S-specific cyclin-D3
ruditapes_c23206	regulation of cell cycle	cell cycle and proliferation	P	G1/S-specific cyclin-D3
ruditapes_c23206	T cell proliferation	cell cycle and proliferation	P	G1/S-specific cyclin-D3
ruditapes_c23206	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	G1/S-specific cyclin-D3
ruditapes_c23206	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	G1/S-specific cyclin-D3
ruditapes_c23206	cell division	other biological processes	P	G1/S-specific cyclin-D3
ruditapes_c23206	cell cycle	cell cycle and proliferation	P	G1/S-specific cyclin-D3
ruditapes_c23206	signal transduction	signal transduction	P	G1/S-specific cyclin-D3
ruditapes_c23206	positive regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	G1/S-specific cyclin-D3
ruditapes_c23206	positive regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	G1/S-specific cyclin-D3
ruditapes_c23206	positive regulation of protein amino acid phosphorylation	protein metabolism	P	G1/S-specific cyclin-D3
ruditapes_c15612	pathogenesis	other biological processes	P	Omega-agatoxin-Aa4a (Omega-AGTX-Aa4a) (Omega-agatoxin IVA) (Omega-Aga-IVA) (Omega-agatoxin-4A)
ruditapes2_c595	detoxification of mercury ion	other biological processes	P	Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)
ruditapes2_c595	response to mercury ion	other biological processes	P	Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)
ruditapes_c16081	response to mercury ion	other biological processes	P	Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)
ruditapes2_c595	cell redox homeostasis	other biological processes	P	Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)
ruditapes2_c595	oxidation reduction	other metabolic processes	P	Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)
ruditapes_c16081	detoxification of mercury ion	other biological processes	P	Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)
ruditapes_c16081	oxidation reduction	other metabolic processes	P	Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)
ruditapes_c16081	cell redox homeostasis	other biological processes	P	Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)
ruditapes_c7863	mRNA processing	RNA metabolism	P	"Serine/arginine-rich splicing factor 2 (Protein PR264) (Splicing component, 35 kDa) (Splicing factor SC35) (SC-35) (Splicing factor, arginine/serine-rich 2)"
ruditapes_c7863	RNA splicing	RNA metabolism	P	"Serine/arginine-rich splicing factor 2 (Protein PR264) (Splicing component, 35 kDa) (Splicing factor SC35) (SC-35) (Splicing factor, arginine/serine-rich 2)"
ruditapes_c21169	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Furin-like protease 2 (Furin-2) (EC 3.4.21.75)
ruditapes_c21169	protein amino acid phosphorylation	protein metabolism	P	Furin-like protease 2 (Furin-2) (EC 3.4.21.75)
ruditapes_c8354	protein amino acid phosphorylation	protein metabolism	P	Furin-like protease 2 (Furin-2) (EC 3.4.21.75)
ruditapes_c8354	proteolysis	protein metabolism	P	Furin-like protease 2 (Furin-2) (EC 3.4.21.75)
ruditapes_c8354	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Furin-like protease 2 (Furin-2) (EC 3.4.21.75)
ruditapes_c21169	proteolysis	protein metabolism	P	Furin-like protease 2 (Furin-2) (EC 3.4.21.75)
ruditapes_c21264	cell wall organization	cell organization and biogenesis	P	Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 2)
ruditapes_c21264	chitin biosynthetic process	other metabolic processes	P	Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 2)
ruditapes_c19314	pathogenesis	other biological processes	P	Chitin synthase 3 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 3) (Class-IV chitin synthase 3)
ruditapes_c19314	cell wall organization	cell organization and biogenesis	P	Chitin synthase 3 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 3) (Class-IV chitin synthase 3)
ruditapes_c19314	hyphal growth	other biological processes	P	Chitin synthase 3 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 3) (Class-IV chitin synthase 3)
ruditapes_c19314	cell wall chitin biosynthetic process	other metabolic processes	P	Chitin synthase 3 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 3) (Class-IV chitin synthase 3)
ruditapes_c8348	cell wall organization	cell organization and biogenesis	P	Chitin synthase A (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase A) (Class-II chitin synthase A)
ruditapes_c18434	chitin biosynthetic process	other metabolic processes	P	Chitin synthase A (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase A) (Class-II chitin synthase A)
ruditapes_c18434	cell wall organization	cell organization and biogenesis	P	Chitin synthase A (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase A) (Class-II chitin synthase A)
ruditapes_c25881	chitin biosynthetic process	other metabolic processes	P	Chitin synthase A (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase A) (Class-II chitin synthase A)
ruditapes_c8348	chitin biosynthetic process	other metabolic processes	P	Chitin synthase A (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase A) (Class-II chitin synthase A)
ruditapes_c25881	cell wall organization	cell organization and biogenesis	P	Chitin synthase A (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase A) (Class-II chitin synthase A)
ruditapes2_c1161	chitin biosynthetic process	other metabolic processes	P	Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 2) (Class-II chitin synthase 2) (Fragment)
ruditapes2_c1161	cell wall organization	cell organization and biogenesis	P	Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 2) (Class-II chitin synthase 2) (Fragment)
ruditapes_c7482	cell wall organization	cell organization and biogenesis	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c7482	chitin biosynthetic process	other metabolic processes	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c14836	chitin biosynthetic process	other metabolic processes	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c14836	cell wall organization	cell organization and biogenesis	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1)
ruditapes_c10733	cell wall organization	cell organization and biogenesis	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1) (Class-II chitin synthase 1)
ruditapes_c10733	chitin biosynthetic process	other metabolic processes	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1) (Class-II chitin synthase 1)
ruditapes_c18109	mitotic cell cycle	cell cycle and proliferation	P	CAP-Gly domain-containing linker protein 1 (Cytoplasmic linker protein 1) (Cytoplasmic linker protein 170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament-associated protein) (Restin)
ruditapes_c18109	M phase of mitotic cell cycle	cell cycle and proliferation	P	CAP-Gly domain-containing linker protein 1 (Cytoplasmic linker protein 1) (Cytoplasmic linker protein 170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament-associated protein) (Restin)
ruditapes_c18109	mitosis	cell organization and biogenesis	P	CAP-Gly domain-containing linker protein 1 (Cytoplasmic linker protein 1) (Cytoplasmic linker protein 170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament-associated protein) (Restin)
ruditapes_c18109	mitotic prometaphase	cell cycle and proliferation	P	CAP-Gly domain-containing linker protein 1 (Cytoplasmic linker protein 1) (Cytoplasmic linker protein 170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament-associated protein) (Restin)
ruditapes_c18109	mitotic prometaphase	cell organization and biogenesis	P	CAP-Gly domain-containing linker protein 1 (Cytoplasmic linker protein 1) (Cytoplasmic linker protein 170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament-associated protein) (Restin)
ruditapes_c18109	positive regulation of microtubule polymerization	protein metabolism	P	CAP-Gly domain-containing linker protein 1 (Cytoplasmic linker protein 1) (Cytoplasmic linker protein 170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament-associated protein) (Restin)
ruditapes_c18109	positive regulation of microtubule polymerization	cell organization and biogenesis	P	CAP-Gly domain-containing linker protein 1 (Cytoplasmic linker protein 1) (Cytoplasmic linker protein 170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament-associated protein) (Restin)
ruditapes_c18109	mitosis	cell cycle and proliferation	P	CAP-Gly domain-containing linker protein 1 (Cytoplasmic linker protein 1) (Cytoplasmic linker protein 170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament-associated protein) (Restin)
ruditapes_c28582	nematode larval development	developmental processes	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	inductive cell migration	other biological processes	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	proton transport	transport	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	dendrite development	cell organization and biogenesis	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	receptor-mediated endocytosis	transport	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	locomotion	other biological processes	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	ATP synthesis coupled proton transport	transport	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	ATP synthesis coupled proton transport	other metabolic processes	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	negative regulation of locomotion	other biological processes	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	dendrite development	developmental processes	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	transport	transport	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	positive regulation of programmed cell death	death	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	hermaphrodite genitalia development	developmental processes	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	embryonic development ending in birth or egg hatching	developmental processes	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	apoptosis	death	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	reproduction	other biological processes	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	positive regulation of growth rate	other biological processes	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	ATP hydrolysis coupled proton transport	transport	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	response to hypoxia	stress response	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	ion transport	transport	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	"synaptic transmission, cholinergic"	cell-cell signaling	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c28582	oogenesis	other biological processes	P	Probable V-type proton ATPase 116 kDa subunit a (V-ATPase 116 kDa isoform a) (Uncoordinated protein 32) (Vacuolar proton translocating ATPase 116 kDa subunit a)
ruditapes_c11394	receptor-mediated endocytosis	transport	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c11394	receptor-mediated endocytosis	cell organization and biogenesis	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c11394	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c11394	hermaphrodite genitalia development	developmental processes	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c11394	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c11394	apoptosis	death	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c11394	embryonic development ending in birth or egg hatching	developmental processes	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c11394	oogenesis	other biological processes	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c11394	positive regulation of growth rate	other biological processes	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c11394	locomotion	other biological processes	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c11394	reproduction	other biological processes	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes2_c7075	vasodilation	other biological processes	P	Maxadilan
ruditapes2_c7075	regulation of blood vessel size	other biological processes	P	Maxadilan
ruditapes_c17482	DNA replication	DNA metabolism	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Cell division control protein 54)
ruditapes_c17482	pre-replicative complex assembly	DNA metabolism	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Cell division control protein 54)
ruditapes_c17482	pre-replicative complex assembly	cell organization and biogenesis	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Cell division control protein 54)
ruditapes_c17482	double-strand break repair via break-induced replication	stress response	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Cell division control protein 54)
ruditapes_c17482	double-strand break repair via break-induced replication	DNA metabolism	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Cell division control protein 54)
ruditapes_c17482	DNA unwinding during replication	DNA metabolism	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Cell division control protein 54)
ruditapes_c17482	DNA strand elongation during DNA replication	DNA metabolism	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Cell division control protein 54)
ruditapes_c17482	cell cycle	cell cycle and proliferation	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Cell division control protein 54)
ruditapes_c17482	S phase of mitotic cell cycle	cell cycle and proliferation	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Cell division control protein 54)
ruditapes_c17482	DNA replication initiation	DNA metabolism	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Cell division control protein 54)
ruditapes_c15409	signal transduction	signal transduction	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 (G gamma-II)
ruditapes_c15409	behavioral fear response	stress response	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 (G gamma-II)
ruditapes_c15409	receptor guanylyl cyclase signaling pathway	signal transduction	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 (G gamma-II)
ruditapes_c15409	regulation of adenylate cyclase activity	other metabolic processes	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 (G gamma-II)
ruditapes_c15409	locomotory behavior	other biological processes	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 (G gamma-II)
ruditapes_c15409	G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 (G gamma-II)
ruditapes_c38395	signal transduction	signal transduction	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c38395	regulation of muscle contraction	other biological processes	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c38395	forebrain development	developmental processes	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c38395	G-protein coupled receptor protein signaling pathway	signal transduction	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c38395	synaptic transmission	cell-cell signaling	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c38395	peristalsis	other biological processes	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c38395	inhibition of adenylate cyclase activity by G-protein signaling	other metabolic processes	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c38395	spermatogenesis	other biological processes	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c38395	cerebellum development	developmental processes	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c38395	neuropeptide signaling pathway	signal transduction	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c38395	response to starvation	stress response	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c38395	inhibition of adenylate cyclase activity by G-protein signaling	signal transduction	P	Somatostatin receptor type 2 (SS-2-R) (SS2-R) (SS2R) (SRIF-1)
ruditapes_c23450	GPI anchor biosynthetic process	protein metabolism	P	GPI mannosyltransferase 3 (EC 2.4.1.-) (GPI mannosyltransferase III) (GPI-MT-III) (Glycosylphosphatidylinositol-anchor biosynthesis protein 10)
ruditapes_c15792	GPI anchor biosynthetic process	protein metabolism	P	GPI mannosyltransferase 3 (EC 2.4.1.-) (GPI mannosyltransferase III) (GPI-MT-III) (Glycosylphosphatidylinositol-anchor biosynthesis protein 10)
ruditapes_c6964	cyclic nucleotide biosynthetic process	other metabolic processes	P	Adenylate cyclase type 5 (EC 4.6.1.1) (ATP pyrophosphate-lyase 5) (Adenylate cyclase type V) (Adenylyl cyclase 5) (Ca(2+)-inhibitable adenylyl cyclase)
ruditapes_c6964	cAMP biosynthetic process	other metabolic processes	P	Adenylate cyclase type 5 (EC 4.6.1.1) (ATP pyrophosphate-lyase 5) (Adenylate cyclase type V) (Adenylyl cyclase 5) (Ca(2+)-inhibitable adenylyl cyclase)
ruditapes_c29398	cAMP biosynthetic process	other metabolic processes	P	Adenylate cyclase type 6 (EC 4.6.1.1) (ATP pyrophosphate-lyase 6) (Adenylate cyclase type VI) (Adenylyl cyclase 6) (Ca(2+)-inhibitable adenylyl cyclase)
ruditapes_c22626	cAMP biosynthetic process	other metabolic processes	P	Adenylate cyclase type 6 (EC 4.6.1.1) (ATP pyrophosphate-lyase 6) (Adenylate cyclase type VI) (Adenylyl cyclase 6) (Ca(2+)-inhibitable adenylyl cyclase)
ruditapes_c29398	cyclic nucleotide biosynthetic process	other metabolic processes	P	Adenylate cyclase type 6 (EC 4.6.1.1) (ATP pyrophosphate-lyase 6) (Adenylate cyclase type VI) (Adenylyl cyclase 6) (Ca(2+)-inhibitable adenylyl cyclase)
ruditapes_c22626	cyclic nucleotide biosynthetic process	other metabolic processes	P	Adenylate cyclase type 6 (EC 4.6.1.1) (ATP pyrophosphate-lyase 6) (Adenylate cyclase type VI) (Adenylyl cyclase 6) (Ca(2+)-inhibitable adenylyl cyclase)
ruditapes_c18905	metabolic process	other metabolic processes	P	Fatty aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase 4) (Aldehyde dehydrogenase family 3 member A2) (Microsomal aldehyde dehydrogenase) (msALDH)
ruditapes_c18905	formaldehyde metabolic process	other metabolic processes	P	Fatty aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase 4) (Aldehyde dehydrogenase family 3 member A2) (Microsomal aldehyde dehydrogenase) (msALDH)
ruditapes_c18905	oxidation reduction	other metabolic processes	P	Fatty aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase 4) (Aldehyde dehydrogenase family 3 member A2) (Microsomal aldehyde dehydrogenase) (msALDH)
ruditapes_c18905	cellular aldehyde metabolic process	other metabolic processes	P	Fatty aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase 4) (Aldehyde dehydrogenase family 3 member A2) (Microsomal aldehyde dehydrogenase) (msALDH)
ruditapes_c18905	response to reactive oxygen species	stress response	P	Fatty aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase 4) (Aldehyde dehydrogenase family 3 member A2) (Microsomal aldehyde dehydrogenase) (msALDH)
ruditapes_c18725	oxidation reduction	other metabolic processes	P	Omega-crystallin
ruditapes_c18725	metabolic process	other metabolic processes	P	Omega-crystallin
ruditapes_c10798	two-component signal transduction system (phosphorelay)	signal transduction	P	Sensor protein EvgS (EC 2.7.13.3)
ruditapes_c10798	phosphorylation	other metabolic processes	P	Sensor protein EvgS (EC 2.7.13.3)
ruditapes_c10798	transport	transport	P	Sensor protein EvgS (EC 2.7.13.3)
ruditapes_c10798	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Sensor protein EvgS (EC 2.7.13.3)
ruditapes_c10798	signal transduction	signal transduction	P	Sensor protein EvgS (EC 2.7.13.3)
ruditapes_c10798	peptidyl-histidine phosphorylation	protein metabolism	P	Sensor protein EvgS (EC 2.7.13.3)
ruditapes_c10798	protein amino acid autophosphorylation	protein metabolism	P	Sensor protein EvgS (EC 2.7.13.3)
ruditapes_c13868	phosphate metabolic process	other metabolic processes	P	Uncharacterized protein YgiF (ORFXE)
ruditapes_c1150	response to antibiotic	other biological processes	P	Beta-lactamase (EC 3.5.2.6)
ruditapes_lrc36658	protein folding	protein metabolism	P	Heat shock protein HSP 90-alpha
ruditapes_lrc36658	response to stress	stress response	P	Heat shock protein HSP 90-alpha
ruditapes_c13160	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor-like protein DTMT
ruditapes_c13160	signal transduction	signal transduction	P	Olfactory receptor-like protein DTMT
ruditapes_c13160	response to stimulus	other biological processes	P	Olfactory receptor-like protein DTMT
ruditapes_c13160	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor-like protein DTMT
ruditapes_c13160	sensory perception of smell	other biological processes	P	Olfactory receptor-like protein DTMT
ruditapes_c25769	heart morphogenesis	developmental processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	cGMP biosynthetic process	other metabolic processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	positive regulation of cell division	other biological processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	ERK1 and ERK2 cascade	signal transduction	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	negative regulation of autophagy	other metabolic processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	neural crest cell differentiation	developmental processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	positive regulation of cytokine production	other biological processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	phosphatidylinositol biosynthetic process	other metabolic processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	positive regulation of cell proliferation	cell cycle and proliferation	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	G-protein coupled receptor internalization	signal transduction	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	G-protein coupled receptor internalization	transport	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	G-protein coupled receptor internalization	other metabolic processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	G-protein coupled receptor internalization	cell organization and biogenesis	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	embryonic morphogenesis	developmental processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	G-protein coupled receptor protein signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	positive regulation of Ras GTPase activity	signal transduction	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	negative regulation of apoptosis	death	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	phosphorylation	other metabolic processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	neural crest cell migration	developmental processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	release of sequestered calcium ion into cytosol	transport	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	serotonin receptor signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	positive regulation of cytokine secretion	transport	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	protein kinase C signaling cascade	signal transduction	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	negative regulation of cell death	death	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	intestine smooth muscle contraction	other biological processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	regulation of behavior	other biological processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	positive regulation of nitric-oxide synthase activity	other biological processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	vasoconstriction	other biological processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	transmembrane calcium ion transport	transport	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	response to drug	other biological processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	phosphoinositide 3-kinase cascade	signal transduction	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	calcium-mediated signaling	signal transduction	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	signal transduction	signal transduction	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	positive regulation of MAP kinase activity	other metabolic processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	positive regulation of endothelial cell proliferation	cell cycle and proliferation	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c25769	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	5-hydroxytryptamine receptor 2B (5-HT-2B) (5-HT2B) (5-HT-2F) (Serotonin receptor 2B) (Stomach fundus serotonin receptor)
ruditapes_c22563	neurotransmitter secretion	transport	P	Botulinum neurotoxin type F (BoNT/F) (EC 3.4.24.69) (Bontoxilysin-F) [Cleaved into: Botulinum neurotoxin F light chain; Botulinum neurotoxin F heavy chain]
ruditapes_c22563	neurotransmitter secretion	cell-cell signaling	P	Botulinum neurotoxin type F (BoNT/F) (EC 3.4.24.69) (Bontoxilysin-F) [Cleaved into: Botulinum neurotoxin F light chain; Botulinum neurotoxin F heavy chain]
ruditapes_c22563	inhibition of neurotransmitter uptake	transport	P	Botulinum neurotoxin type F (BoNT/F) (EC 3.4.24.69) (Bontoxilysin-F) [Cleaved into: Botulinum neurotoxin F light chain; Botulinum neurotoxin F heavy chain]
ruditapes_c22563	inhibition of neurotransmitter uptake	cell-cell signaling	P	Botulinum neurotoxin type F (BoNT/F) (EC 3.4.24.69) (Bontoxilysin-F) [Cleaved into: Botulinum neurotoxin F light chain; Botulinum neurotoxin F heavy chain]
ruditapes_c22563	proteolysis	protein metabolism	P	Botulinum neurotoxin type F (BoNT/F) (EC 3.4.24.69) (Bontoxilysin-F) [Cleaved into: Botulinum neurotoxin F light chain; Botulinum neurotoxin F heavy chain]
ruditapes_c22563	synaptic transmission	cell-cell signaling	P	Botulinum neurotoxin type F (BoNT/F) (EC 3.4.24.69) (Bontoxilysin-F) [Cleaved into: Botulinum neurotoxin F light chain; Botulinum neurotoxin F heavy chain]
ruditapes_c22563	pathogenesis	other biological processes	P	Botulinum neurotoxin type F (BoNT/F) (EC 3.4.24.69) (Bontoxilysin-F) [Cleaved into: Botulinum neurotoxin F light chain; Botulinum neurotoxin F heavy chain]
ruditapes_c16741	cell adhesion	cell adhesion	P	Junction plakoglobin (Desmoplakin III) (Desmoplakin-3)
ruditapes_c28023	Wnt receptor signaling pathway	signal transduction	P	Catenin delta-1 (Cadherin-associated Src substrate) (CAS) (p120 catenin) (p120(ctn)) (p120(cas))
ruditapes_c28023	cell adhesion	cell adhesion	P	Catenin delta-1 (Cadherin-associated Src substrate) (CAS) (p120 catenin) (p120(ctn)) (p120(cas))
ruditapes_c28023	"transcription, DNA-dependent"	RNA metabolism	P	Catenin delta-1 (Cadherin-associated Src substrate) (CAS) (p120 catenin) (p120(ctn)) (p120(cas))
ruditapes_c28023	epithelial cell differentiation involved in salivary gland development	developmental processes	P	Catenin delta-1 (Cadherin-associated Src substrate) (CAS) (p120 catenin) (p120(ctn)) (p120(cas))
ruditapes_c28023	salivary gland morphogenesis	developmental processes	P	Catenin delta-1 (Cadherin-associated Src substrate) (CAS) (p120 catenin) (p120(ctn)) (p120(cas))
ruditapes_c28023	cell-cell adhesion	cell adhesion	P	Catenin delta-1 (Cadherin-associated Src substrate) (CAS) (p120 catenin) (p120(ctn)) (p120(cas))
ruditapes_c28023	keratinocyte differentiation	other biological processes	P	Catenin delta-1 (Cadherin-associated Src substrate) (CAS) (p120 catenin) (p120(ctn)) (p120(cas))
ruditapes_c28023	morphogenesis of a polarized epithelium	developmental processes	P	Catenin delta-1 (Cadherin-associated Src substrate) (CAS) (p120 catenin) (p120(ctn)) (p120(cas))
ruditapes_c28023	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Catenin delta-1 (Cadherin-associated Src substrate) (CAS) (p120 catenin) (p120(ctn)) (p120(cas))
ruditapes_c24800	aromatic amino acid family metabolic process	other metabolic processes	P	Tyrosine phenol-lyase (EC 4.1.99.2) (Beta-tyrosinase)
ruditapes_c24800	cellular amino acid metabolic process	other metabolic processes	P	Tyrosine phenol-lyase (EC 4.1.99.2) (Beta-tyrosinase)
ruditapes2_c3037	transport	transport	P	"ADP,ATP carrier protein 1, mitochondrial (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1)"
ruditapes2_c3037	purine nucleotide transport	transport	P	"ADP,ATP carrier protein 1, mitochondrial (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1)"
ruditapes2_c3037	transmembrane transport	transport	P	"ADP,ATP carrier protein 1, mitochondrial (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1)"
ruditapes_c15960	reductive pentose-phosphate cycle	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) (Fragment)
ruditapes_c15960	photosynthesis	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) (Fragment)
ruditapes_c15960	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) (Fragment)
ruditapes_c15960	photorespiration	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) (Fragment)
ruditapes_c15960	oxidation reduction	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) (Fragment)
ruditapes_c1914	iron ion transport	transport	P	Saxiphilin (SAX)
ruditapes_c1914	cellular iron ion homeostasis	other biological processes	P	Saxiphilin (SAX)
ruditapes_c26878	negative regulation of glycogen biosynthetic process	other metabolic processes	P	Serine/threonine-protein kinase PSK1 (EC 2.7.11.1) (PAS kinase 1)
ruditapes_c26878	signal transduction	signal transduction	P	Serine/threonine-protein kinase PSK1 (EC 2.7.11.1) (PAS kinase 1)
ruditapes_c26878	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PSK1 (EC 2.7.11.1) (PAS kinase 1)
ruditapes_c26878	regulation of translation	protein metabolism	P	Serine/threonine-protein kinase PSK1 (EC 2.7.11.1) (PAS kinase 1)
ruditapes_c26878	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PSK1 (EC 2.7.11.1) (PAS kinase 1)
ruditapes_c3844	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (V-ATPase 26 kDa subunit) (Vacuolar proton pump subunit E)
ruditapes_c3844	transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (V-ATPase 26 kDa subunit) (Vacuolar proton pump subunit E)
ruditapes_c3844	proton transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (V-ATPase 26 kDa subunit) (Vacuolar proton pump subunit E)
ruditapes_c3844	ion transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (V-ATPase 26 kDa subunit) (Vacuolar proton pump subunit E)
ruditapes_c27152	synaptic transmission	cell-cell signaling	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	positive regulation of long-term neuronal synaptic plasticity	developmental processes	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	positive regulation of long-term neuronal synaptic plasticity	cell-cell signaling	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	activation of phospholipase C activity by metabotropic glutamate receptor signaling pathway	signal transduction	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	learning	other biological processes	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	regulation of long-term neuronal synaptic plasticity	cell-cell signaling	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	protein amino acid phosphorylation	protein metabolism	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	negative regulation of locomotion	other biological processes	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	phosphoinositide-mediated signaling	signal transduction	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	"elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)"	signal transduction	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	G-protein coupled receptor protein signaling pathway	signal transduction	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	signal transduction	signal transduction	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	activation of MAPKKK activity	signal transduction	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	activation of MAPKKK activity	other metabolic processes	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	locomotory behavior	other biological processes	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	desensitization of G-protein coupled receptor protein signaling pathway	signal transduction	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c27152	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Metabotropic glutamate receptor 5 (mGluR5)
ruditapes_c17806	negative regulation of cell migration	other biological processes	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes_c17806	antibiotic metabolic process	other metabolic processes	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes_c17806	proteolysis	protein metabolism	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes2_c1491	negative regulation of apoptosis	death	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes2_c1491	homocysteine metabolic process	other metabolic processes	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes2_c1491	negative regulation of cell migration	other biological processes	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes2_c1491	negative regulation of caspase activity	death	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes2_c1491	antibiotic metabolic process	other metabolic processes	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes_c17806	negative regulation of apoptosis	death	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes_c17806	negative regulation of caspase activity	death	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes_c17806	homocysteine metabolic process	other metabolic processes	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes2_c1491	proteolysis	protein metabolism	P	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Microsomal dipeptidase)
ruditapes_c23491	oxidation reduction	other metabolic processes	P	Putative inactive 6-phospho-alpha-glucosidase
ruditapes_c23491	carbohydrate metabolic process	other metabolic processes	P	Putative inactive 6-phospho-alpha-glucosidase
ruditapes2_c2310	ion transport	transport	P	V-type proton ATPase subunit F (V-ATPase subunit F) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F)
ruditapes2_c2310	proton transport	transport	P	V-type proton ATPase subunit F (V-ATPase subunit F) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F)
ruditapes2_c2310	transport	transport	P	V-type proton ATPase subunit F (V-ATPase subunit F) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F)
ruditapes2_c2310	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit F (V-ATPase subunit F) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F)
ruditapes_c14523	photosynthetic electron transport chain	other metabolic processes	P	Cytochrome b6
ruditapes_c14523	electron transport chain	other metabolic processes	P	Cytochrome b6
ruditapes_c14523	photosynthesis	other metabolic processes	P	Cytochrome b6
ruditapes_c14523	transport	transport	P	Cytochrome b6
ruditapes_c14523	respiratory electron transport chain	other metabolic processes	P	Cytochrome b6
ruditapes_s39232	transport	transport	P	Hemin receptor
ruditapes_s39232	ion transport	transport	P	Hemin receptor
ruditapes_s39232	iron ion homeostasis	other biological processes	P	Hemin receptor
ruditapes_c4440	defense response to bacterium	stress response	P	Sapecin-B
ruditapes_c4440	defense response	stress response	P	Sapecin-B
ruditapes_c4440	innate immune response	stress response	P	Sapecin-B
ruditapes2_c1354	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein engrailed-2b (Homeobox protein en-2b) (Zf-En-1)
ruditapes2_c1354	multicellular organismal development	developmental processes	P	Homeobox protein engrailed-2b (Homeobox protein en-2b) (Zf-En-1)
ruditapes_c27219	metabolic process	other metabolic processes	P	Uncharacterized protein ycf23
ruditapes_c18266	DNA replication	DNA metabolism	P	Replication-associated protein A (RepA) (EC 3.1.21.-)
ruditapes_c18266	interspecies interaction between organisms	other biological processes	P	Replication-associated protein A (RepA) (EC 3.1.21.-)
ruditapes_c4520	virion assembly	cell organization and biogenesis	P	Matrix protein
ruditapes_c18421	ATP synthesis coupled proton transport	transport	P	Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (Glycoprotein 135) (gp135); Transmembrane protein (Glycoprotein 38) (gp38)]
ruditapes_c18421	ATP synthesis coupled proton transport	other metabolic processes	P	Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (Glycoprotein 135) (gp135); Transmembrane protein (Glycoprotein 38) (gp38)]
ruditapes_c18421	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (Glycoprotein 135) (gp135); Transmembrane protein (Glycoprotein 38) (gp38)]
ruditapes_c8804	neurotransmitter transport	transport	P	Sodium- and chloride-dependent taurine transporter (Solute carrier family 6 member 6)
ruditapes_c8804	transport	transport	P	Sodium- and chloride-dependent taurine transporter (Solute carrier family 6 member 6)
ruditapes_c8804	amino acid transport	transport	P	Sodium- and chloride-dependent taurine transporter (Solute carrier family 6 member 6)
ruditapes_c8804	ion transport	transport	P	Sodium- and chloride-dependent taurine transporter (Solute carrier family 6 member 6)
ruditapes_c8804	taurine transport	transport	P	Sodium- and chloride-dependent taurine transporter (Solute carrier family 6 member 6)
ruditapes_c8804	beta-alanine transport	transport	P	Sodium- and chloride-dependent taurine transporter (Solute carrier family 6 member 6)
ruditapes_c8804	transmembrane transport	transport	P	Sodium- and chloride-dependent taurine transporter (Solute carrier family 6 member 6)
ruditapes_c8804	cellular amino acid metabolic process	other metabolic processes	P	Sodium- and chloride-dependent taurine transporter (Solute carrier family 6 member 6)
ruditapes_c14373	transport	transport	P	Sodium- and chloride-dependent GABA transporter 3 (GAT-3) (Solute carrier family 6 member 11)
ruditapes_c14373	brain development	developmental processes	P	Sodium- and chloride-dependent GABA transporter 3 (GAT-3) (Solute carrier family 6 member 11)
ruditapes_c14373	neurotransmitter transport	transport	P	Sodium- and chloride-dependent GABA transporter 3 (GAT-3) (Solute carrier family 6 member 11)
ruditapes_c14373	response to drug	other biological processes	P	Sodium- and chloride-dependent GABA transporter 3 (GAT-3) (Solute carrier family 6 member 11)
ruditapes2_c5277	translation	protein metabolism	P	40S ribosomal protein S15
ruditapes_lrc33878	translation	protein metabolism	P	40S ribosomal protein S15
ruditapes_lrc37863	translation	protein metabolism	P	40S ribosomal protein S15
ruditapes2_c5679	translation	protein metabolism	P	40S ribosomal protein S15
ruditapes2_c5544	translation	protein metabolism	P	40S ribosomal protein S15
ruditapes2_c4596	translation	protein metabolism	P	40S ribosomal protein S15
ruditapes_lrc34380	translation	protein metabolism	P	40S ribosomal protein S15
ruditapes_lrc34753	translation	protein metabolism	P	40S ribosomal protein S15
ruditapes2_c1574	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	synaptic transmission	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	cell differentiation	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	regulation of receptor activity	other biological processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	multicellular organismal development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	positive regulation of neuron apoptosis	death	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_s36816	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	plasma membrane organization	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	neurotransmitter receptor metabolic process	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	neurotransmitter receptor metabolic process	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes2_c1574	muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	regulation of synaptic growth at neuromuscular junction	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	regulation of synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	regulation of synaptic growth at neuromuscular junction	cell-cell signaling	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	receptor clustering	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	receptor clustering	signal transduction	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c10373	receptor clustering	other metabolic processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	neuromuscular junction development	developmental processes	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c7986	neuromuscular junction development	cell organization and biogenesis	P	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]
ruditapes_c9418	response to glucocorticoid stimulus	other biological processes	P	Complement C1q subcomponent subunit B
ruditapes_c9418	innate immune response	stress response	P	Complement C1q subcomponent subunit B
ruditapes_c9418	immune response	other biological processes	P	Complement C1q subcomponent subunit B
ruditapes_c9418	brain development	developmental processes	P	Complement C1q subcomponent subunit B
ruditapes_c9418	response to organic substance	other biological processes	P	Complement C1q subcomponent subunit B
ruditapes_c9418	"complement activation, classical pathway"	stress response	P	Complement C1q subcomponent subunit B
ruditapes_c9418	"complement activation, classical pathway"	protein metabolism	P	Complement C1q subcomponent subunit B
ruditapes_c9418	aging	other biological processes	P	Complement C1q subcomponent subunit B
ruditapes2_lrc6122	carbohydrate metabolic process	other metabolic processes	P	Cyclomaltodextrin glucanotransferase (EC 2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase)
ruditapes_c9365	sucrose metabolic process	other metabolic processes	P	Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 1)
ruditapes_c9365	biosynthetic process	other metabolic processes	P	Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 1)
ruditapes_c20138	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase) (Fragment)
ruditapes_c20138	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase) (Fragment)
ruditapes_c20138	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase) (Fragment)
ruditapes_c20138	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase) (Fragment)
ruditapes_c4436	"transcription, DNA-dependent"	RNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c4436	DNA replication	DNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c4436	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c4436	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c13306	cysteine biosynthetic process from serine	other metabolic processes	P	Serine acetyltransferase (SAT) (EC 2.3.1.30)
ruditapes_c13306	cellular amino acid biosynthetic process	other metabolic processes	P	Serine acetyltransferase (SAT) (EC 2.3.1.30)
ruditapes_c13306	cysteine biosynthetic process	other metabolic processes	P	Serine acetyltransferase (SAT) (EC 2.3.1.30)
ruditapes_c8698	nervous system development	developmental processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	neuron projection development	developmental processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	neuron projection development	cell organization and biogenesis	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	multicellular organismal development	developmental processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	cell death	death	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	positive regulation of calcium-mediated signaling	signal transduction	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	cell surface receptor linked signal transduction	signal transduction	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	leukocyte migration	other biological processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	heterophilic cell adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	positive regulation of cell-cell adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	blood coagulation	stress response	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	cell-cell adhesion mediated by integrin	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	homophilic cell adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	homotypic cell-cell adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	leukocyte adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	cell adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	cell differentiation	other biological processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	chemotaxis	other biological processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	axon guidance	developmental processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c8698	axon guidance	cell organization and biogenesis	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (CD antigen CD171)
ruditapes_c12087	cell adhesion	cell adhesion	P	Collagen alpha-1(XIV) chain (Undulin)
ruditapes_c28623	cell adhesion	cell adhesion	P	Collagen alpha-1(XIV) chain (Undulin)
ruditapes_c10008	RNA processing	RNA metabolism	P	Lupus La protein homolog (La autoantigen homolog) (La ribonucleoprotein)
ruditapes_c12291	positive regulation of hormone secretion	transport	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	positive regulation of hormone secretion	cell-cell signaling	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	mammary gland development	developmental processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	signal transduction	signal transduction	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	adenohypophysis development	developmental processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	positive regulation of cAMP biosynthetic process	other metabolic processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	cellular response to insulin stimulus	other biological processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	positive regulation of cell proliferation	cell cycle and proliferation	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	cell surface receptor linked signal transduction	signal transduction	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	positive regulation of cAMP metabolic process	other metabolic processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	hormone metabolic process	other metabolic processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	positive regulation of growth hormone secretion	transport	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	positive regulation of growth hormone secretion	cell-cell signaling	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	somatotropin secreting cell development	developmental processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	determination of adult life span	developmental processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	regulation of steroid hormone receptor signaling pathway	signal transduction	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	cell maturation	other biological processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	cAMP-mediated signaling	signal transduction	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	positive regulation of multicellular organism growth	other biological processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	activation of adenylate cyclase activity	other metabolic processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	lactation	developmental processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	G-protein coupled receptor protein signaling pathway	signal transduction	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	response to insulin stimulus	other biological processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	"G-protein signaling, coupled to cAMP nucleotide second messenger"	signal transduction	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	regulation of insulin-like growth factor receptor signaling pathway	signal transduction	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	growth hormone secretion	transport	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	growth hormone secretion	cell-cell signaling	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	water homeostasis	other biological processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	response to estrogen stimulus	other biological processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	regulation of protein metabolic process	protein metabolism	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c12291	response to glucocorticoid stimulus	other biological processes	P	Growth hormone-releasing hormone receptor (GHRH receptor) (Growth hormone-releasing factor receptor) (GRF receptor) (GRFR)
ruditapes_c16257	nematode larval development	developmental processes	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes_c16257	"regulation of transcription, DNA-dependent"	RNA metabolism	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes_c16257	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes_c16257	receptor-mediated endocytosis	transport	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes_c16257	receptor-mediated endocytosis	cell organization and biogenesis	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes_c16257	growth	other biological processes	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes_c16257	embryonic development ending in birth or egg hatching	developmental processes	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes_c16257	"transcription, DNA-dependent"	RNA metabolism	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes_c16257	positive regulation of growth rate	other biological processes	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes_c16257	transcription initiation from RNA polymerase II promoter	RNA metabolism	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes_c16257	transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes_c16257	determination of adult life span	developmental processes	P	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)
ruditapes2_lrc4714	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes2_lrc4714	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L7
ruditapes2_lrc4714	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L7
ruditapes2_lrc4714	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L7
ruditapes2_lrc4714	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L7
ruditapes_c39111	copper ion transport	transport	P	Probable copper-importing P-type ATPase A (EC 3.6.3.-)
ruditapes_c39111	metal ion transport	transport	P	Probable copper-importing P-type ATPase A (EC 3.6.3.-)
ruditapes_c39111	ion transport	transport	P	Probable copper-importing P-type ATPase A (EC 3.6.3.-)
ruditapes_c39111	cation transport	transport	P	Probable copper-importing P-type ATPase A (EC 3.6.3.-)
ruditapes_c39111	metabolic process	other metabolic processes	P	Probable copper-importing P-type ATPase A (EC 3.6.3.-)
ruditapes_c39111	ATP metabolic process	other metabolic processes	P	Probable copper-importing P-type ATPase A (EC 3.6.3.-)
ruditapes_c39111	ATP biosynthetic process	other metabolic processes	P	Probable copper-importing P-type ATPase A (EC 3.6.3.-)
ruditapes_c39111	transport	transport	P	Probable copper-importing P-type ATPase A (EC 3.6.3.-)
ruditapes_s38880	translation	protein metabolism	P	Elongation factor 1-delta (EF-1-delta)
ruditapes_s38880	translational elongation	protein metabolism	P	Elongation factor 1-delta (EF-1-delta)
ruditapes_c14679	signal transduction	signal transduction	P	Calcitonin receptor (CT-R) (C1A/C1B)
ruditapes_c14679	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Calcitonin receptor (CT-R) (C1A/C1B)
ruditapes_c14679	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Calcitonin receptor (CT-R) (C1A/C1B)
ruditapes_c14679	"G-protein signaling, coupled to cAMP nucleotide second messenger"	signal transduction	P	Calcitonin receptor (CT-R) (C1A/C1B)
ruditapes_c14679	cell surface receptor linked signal transduction	signal transduction	P	Calcitonin receptor (CT-R) (C1A/C1B)
ruditapes_c14679	elevation of cytosolic calcium ion concentration	other biological processes	P	Calcitonin receptor (CT-R) (C1A/C1B)
ruditapes_c14679	G-protein coupled receptor protein signaling pathway	signal transduction	P	Calcitonin receptor (CT-R) (C1A/C1B)
ruditapes_c14679	regulation of mRNA stability	RNA metabolism	P	Calcitonin receptor (CT-R) (C1A/C1B)
ruditapes_c14679	osteoclast differentiation	developmental processes	P	Calcitonin receptor (CT-R) (C1A/C1B)
ruditapes_c14679	negative regulation of ossification	developmental processes	P	Calcitonin receptor (CT-R) (C1A/C1B)
ruditapes2_c2963	adult feeding behavior	other biological processes	P	Bombesin receptor subtype-3 (BRS-3)
ruditapes2_c2963	regulation of blood pressure	other biological processes	P	Bombesin receptor subtype-3 (BRS-3)
ruditapes2_c2963	signal transduction	signal transduction	P	Bombesin receptor subtype-3 (BRS-3)
ruditapes2_c2963	bombesin receptor signaling pathway	signal transduction	P	Bombesin receptor subtype-3 (BRS-3)
ruditapes2_c2963	glucose metabolic process	other metabolic processes	P	Bombesin receptor subtype-3 (BRS-3)
ruditapes2_c2963	G-protein coupled receptor protein signaling pathway	signal transduction	P	Bombesin receptor subtype-3 (BRS-3)
ruditapes_c10785	memory	other biological processes	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	signal transduction	signal transduction	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	neuroprotection	death	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	positive regulation of cell differentiation	other biological processes	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	G-protein coupled receptor protein signaling pathway	signal transduction	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	positive regulation of cell proliferation	cell cycle and proliferation	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	cell surface receptor linked signal transduction	signal transduction	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	feeding behavior	other biological processes	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	insulin secretion	transport	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	insulin secretion	cell-cell signaling	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	positive regulation of glucose import	transport	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	learning or memory	other biological processes	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	release of sequestered calcium ion into cytosol	transport	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	hormone secretion	cell-cell signaling	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	negative regulation of apoptosis	death	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	positive regulation of insulin secretion	transport	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	positive regulation of insulin secretion	cell-cell signaling	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	positive regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	response to glucose stimulus	other biological processes	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	positive regulation of blood pressure	other biological processes	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	associative learning	other biological processes	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	positive regulation of heart contraction	other biological processes	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	neuropeptide signaling pathway	signal transduction	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	cAMP-mediated signaling	signal transduction	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c10785	hormone secretion	transport	P	Glucagon-like peptide 1 receptor (GLP-1 receptor) (GLP-1-R) (GLP-1R)
ruditapes_c23969	RNA splicing	RNA metabolism	P	A1 cistron-splicing factor AAR2
ruditapes_c23969	assembly of spliceosomal tri-snRNP	RNA metabolism	P	A1 cistron-splicing factor AAR2
ruditapes_c23969	assembly of spliceosomal tri-snRNP	cell organization and biogenesis	P	A1 cistron-splicing factor AAR2
ruditapes_c23969	mRNA processing	RNA metabolism	P	A1 cistron-splicing factor AAR2
ruditapes_lrc18641	proton transport	transport	P	V-type proton ATPase subunit d (V-ATPase subunit d) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) (Vacuolar proton pump subunit d)
ruditapes_lrc18641	vacuolar acidification	other biological processes	P	V-type proton ATPase subunit d (V-ATPase subunit d) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) (Vacuolar proton pump subunit d)
ruditapes_lrc18641	ion transport	transport	P	V-type proton ATPase subunit d (V-ATPase subunit d) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) (Vacuolar proton pump subunit d)
ruditapes_lrc18641	transport	transport	P	V-type proton ATPase subunit d (V-ATPase subunit d) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) (Vacuolar proton pump subunit d)
ruditapes_lrc18641	vacuolar transport	transport	P	V-type proton ATPase subunit d (V-ATPase subunit d) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) (Vacuolar proton pump subunit d)
ruditapes_lrc18641	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit d (V-ATPase subunit d) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) (Vacuolar proton pump subunit d)
ruditapes_c21711	steroid biosynthetic process	other metabolic processes	P	Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Ergosterol biosynthesis protein 19) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diphosphate decarboxylase) (MDD) (MDDase)
ruditapes_c21711	sterol biosynthetic process	other metabolic processes	P	Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Ergosterol biosynthesis protein 19) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diphosphate decarboxylase) (MDD) (MDDase)
ruditapes_c21711	isoprenoid biosynthetic process	other metabolic processes	P	Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Ergosterol biosynthesis protein 19) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diphosphate decarboxylase) (MDD) (MDDase)
ruditapes_c21711	lipid biosynthetic process	other metabolic processes	P	Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Ergosterol biosynthesis protein 19) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diphosphate decarboxylase) (MDD) (MDDase)
ruditapes_c21711	phosphorylation	other metabolic processes	P	Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Ergosterol biosynthesis protein 19) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diphosphate decarboxylase) (MDD) (MDDase)
ruditapes_c14941	ribosome biogenesis	other biological processes	P	Ribonucleoprotein 1
ruditapes_lrc34182	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a
ruditapes_s33530	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a
ruditapes2_lrc6948	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a
ruditapes_lrc35261	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a
ruditapes_c9372	cofactor metabolic process	other metabolic processes	P	"Biotin synthase, mitochondrial (EC 2.8.1.6)"
ruditapes_c9372	biotin biosynthetic process	other metabolic processes	P	"Biotin synthase, mitochondrial (EC 2.8.1.6)"
ruditapes_c26470	sterol biosynthetic process	other metabolic processes	P	Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol reductase) (Sterol C14-reductase)
ruditapes_c26470	steroid biosynthetic process	other metabolic processes	P	Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol reductase) (Sterol C14-reductase)
ruditapes_c26470	oxidation reduction	other metabolic processes	P	Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol reductase) (Sterol C14-reductase)
ruditapes_c26470	lipid biosynthetic process	other metabolic processes	P	Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol reductase) (Sterol C14-reductase)
ruditapes_c26470	ergosterol biosynthetic process	other metabolic processes	P	Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol reductase) (Sterol C14-reductase)
ruditapes_c27434	signal transduction	signal transduction	P	MAP kinase kinase MKK2/SSP33 (EC 2.7.12.2)
ruditapes_c27434	phosphorylation	other metabolic processes	P	MAP kinase kinase MKK2/SSP33 (EC 2.7.12.2)
ruditapes_c27434	protein amino acid phosphorylation	protein metabolism	P	MAP kinase kinase MKK2/SSP33 (EC 2.7.12.2)
ruditapes_c27434	peroxisome degradation	other metabolic processes	P	MAP kinase kinase MKK2/SSP33 (EC 2.7.12.2)
ruditapes_c27434	peroxisome degradation	cell organization and biogenesis	P	MAP kinase kinase MKK2/SSP33 (EC 2.7.12.2)
ruditapes_c28426	viral reproduction	other biological processes	P	Glycoprotein gp2 (Glycoprotein X) (GpX)
ruditapes_c732	actin cortical patch assembly	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c317	actin cortical patch assembly	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_lrc12462	axial cellular bud site selection	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c5018	axial cellular bud site selection	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c317	cytokinesis	other biological processes	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c732	cytokinesis	other biological processes	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c1142	axial cellular bud site selection	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c5018	endocytosis	transport	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c5018	endocytosis	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_lrc12462	endocytosis	transport	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_lrc12462	endocytosis	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c732	bipolar cellular bud site selection	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_lrc12462	cytokinesis	other biological processes	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c1142	endocytosis	transport	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c1142	endocytosis	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c5018	cytokinesis	other biological processes	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_lrc12462	bipolar cellular bud site selection	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c732	axial cellular bud site selection	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c732	endocytosis	transport	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c732	endocytosis	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c5018	bipolar cellular bud site selection	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c317	axial cellular bud site selection	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_lrc12462	actin cortical patch assembly	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c5018	actin cortical patch assembly	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c1142	bipolar cellular bud site selection	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c317	bipolar cellular bud site selection	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c317	endocytosis	transport	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c317	endocytosis	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c1142	cytokinesis	other biological processes	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c1142	actin cortical patch assembly	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein PAN1 (Mitochondrial distribution of proteins protein 3)
ruditapes_c4600	transport	transport	P	"V-type proton ATPase subunit a, vacuolar isoform (V-ATPase a 1 subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) (Vacuolar proton pump a subunit) (Vacuolar proton translocating ATPase subunit a 1)"
ruditapes_c4600	ATP hydrolysis coupled proton transport	transport	P	"V-type proton ATPase subunit a, vacuolar isoform (V-ATPase a 1 subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) (Vacuolar proton pump a subunit) (Vacuolar proton translocating ATPase subunit a 1)"
ruditapes_c4600	cell growth	other biological processes	P	"V-type proton ATPase subunit a, vacuolar isoform (V-ATPase a 1 subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) (Vacuolar proton pump a subunit) (Vacuolar proton translocating ATPase subunit a 1)"
ruditapes_c4600	proton transport	transport	P	"V-type proton ATPase subunit a, vacuolar isoform (V-ATPase a 1 subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) (Vacuolar proton pump a subunit) (Vacuolar proton translocating ATPase subunit a 1)"
ruditapes_c4600	ion transport	transport	P	"V-type proton ATPase subunit a, vacuolar isoform (V-ATPase a 1 subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) (Vacuolar proton pump a subunit) (Vacuolar proton translocating ATPase subunit a 1)"
ruditapes_c4600	protein complex assembly	cell organization and biogenesis	P	"V-type proton ATPase subunit a, vacuolar isoform (V-ATPase a 1 subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) (Vacuolar proton pump a subunit) (Vacuolar proton translocating ATPase subunit a 1)"
ruditapes_c4600	vacuolar acidification	other biological processes	P	"V-type proton ATPase subunit a, vacuolar isoform (V-ATPase a 1 subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) (Vacuolar proton pump a subunit) (Vacuolar proton translocating ATPase subunit a 1)"
ruditapes_c4600	polyphosphate metabolic process	other metabolic processes	P	"V-type proton ATPase subunit a, vacuolar isoform (V-ATPase a 1 subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) (Vacuolar proton pump a subunit) (Vacuolar proton translocating ATPase subunit a 1)"
ruditapes_c2656	ubiquitin-dependent protein catabolic process	protein metabolism	P	26S proteasome regulatory subunit RPN2
ruditapes_c2656	regulation of catalytic activity	other biological processes	P	26S proteasome regulatory subunit RPN2
ruditapes_c2656	proteasome assembly	cell organization and biogenesis	P	26S proteasome regulatory subunit RPN2
ruditapes_c2656	regulation of protein catabolic process	protein metabolism	P	26S proteasome regulatory subunit RPN2
ruditapes_c31356	response to drug	other biological processes	P	Protein SNQ2
ruditapes_c31356	ATP catabolic process	other metabolic processes	P	Protein SNQ2
ruditapes_c31356	transport	transport	P	Protein SNQ2
ruditapes_c30721	mitosis	cell cycle and proliferation	P	Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2) (PTPase 2)
ruditapes_c30721	mitosis	cell organization and biogenesis	P	Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2) (PTPase 2)
ruditapes_c30721	dephosphorylation	other metabolic processes	P	Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2) (PTPase 2)
ruditapes_c30721	cell cycle	cell cycle and proliferation	P	Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2) (PTPase 2)
ruditapes_c30721	negative regulation of meiosis	cell cycle and proliferation	P	Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2) (PTPase 2)
ruditapes_c30721	cell division	other biological processes	P	Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2) (PTPase 2)
ruditapes_c30721	stress-activated MAPK cascade	signal transduction	P	Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2) (PTPase 2)
ruditapes_c30721	stress-activated MAPK cascade	stress response	P	Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2) (PTPase 2)
ruditapes_c30721	protein amino acid dephosphorylation	protein metabolism	P	Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2) (PTPase 2)
ruditapes_c30721	negative regulation of G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2) (PTPase 2)
ruditapes2_c2819	signal transduction	signal transduction	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	regulation of cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	G1 phase of mitotic cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	positive regulation of endocytosis	cell organization and biogenesis	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	phosphoinositide phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	negative regulation of autophagy	other metabolic processes	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	positive regulation of endocytosis	transport	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	actin filament reorganization during cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	actin filament reorganization during cell cycle	cell organization and biogenesis	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	ribosome biogenesis	other biological processes	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	establishment or maintenance of actin cytoskeleton polarity	cell organization and biogenesis	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	cytoskeleton organization	cell organization and biogenesis	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	TOR signaling pathway	signal transduction	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	Rho protein signal transduction	signal transduction	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c2819	regulation of cell growth	other biological processes	P	Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
ruditapes2_c1335	protein amino acid N-linked glycosylation	protein metabolism	P	Mannan polymerase II complex ANP1 subunit (M-Pol II subunit ANP1) (Aminonitrophenyl propanediol resistance protein)
ruditapes2_c1335	cell wall mannoprotein biosynthetic process	other metabolic processes	P	Mannan polymerase II complex ANP1 subunit (M-Pol II subunit ANP1) (Aminonitrophenyl propanediol resistance protein)
ruditapes_c9561	establishment or maintenance of cell polarity	cell organization and biogenesis	P	Phospholipid-transporting ATPase DNF1 (EC 3.6.3.1) (Flippase DNF1)
ruditapes_c9561	lipid transport	transport	P	Phospholipid-transporting ATPase DNF1 (EC 3.6.3.1) (Flippase DNF1)
ruditapes_c9561	transport	transport	P	Phospholipid-transporting ATPase DNF1 (EC 3.6.3.1) (Flippase DNF1)
ruditapes_c9561	phospholipid transport	transport	P	Phospholipid-transporting ATPase DNF1 (EC 3.6.3.1) (Flippase DNF1)
ruditapes_c9561	cation transport	transport	P	Phospholipid-transporting ATPase DNF1 (EC 3.6.3.1) (Flippase DNF1)
ruditapes_c9561	phospholipid translocation	transport	P	Phospholipid-transporting ATPase DNF1 (EC 3.6.3.1) (Flippase DNF1)
ruditapes_c9561	phospholipid translocation	cell organization and biogenesis	P	Phospholipid-transporting ATPase DNF1 (EC 3.6.3.1) (Flippase DNF1)
ruditapes_c9561	endocytosis	transport	P	Phospholipid-transporting ATPase DNF1 (EC 3.6.3.1) (Flippase DNF1)
ruditapes_c9561	endocytosis	cell organization and biogenesis	P	Phospholipid-transporting ATPase DNF1 (EC 3.6.3.1) (Flippase DNF1)
ruditapes_c11350	carbohydrate metabolic process	other metabolic processes	P	D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)
ruditapes_c11350	cellular carbohydrate metabolic process	other metabolic processes	P	D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)
ruditapes_c11350	D-allose catabolic process	other metabolic processes	P	D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)
ruditapes_c11350	metabolic process	other metabolic processes	P	D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)
ruditapes2_lrc3383	transport	transport	P	D-allose transport system permease protein AlsC
ruditapes2_lrc3383	carbohydrate transport	transport	P	D-allose transport system permease protein AlsC
ruditapes_c26638	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c26638	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c26638	RNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c26638	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes2_c2025	transport	transport	P	"Carnitine O-acetyltransferase, mitochondrial (Carnitine acetylase) (EC 2.3.1.7)"
ruditapes2_c2025	carnitine metabolic process	other metabolic processes	P	"Carnitine O-acetyltransferase, mitochondrial (Carnitine acetylase) (EC 2.3.1.7)"
ruditapes2_c2025	fatty acid metabolic process	other metabolic processes	P	"Carnitine O-acetyltransferase, mitochondrial (Carnitine acetylase) (EC 2.3.1.7)"
ruditapes2_c2025	lipid metabolic process	other metabolic processes	P	"Carnitine O-acetyltransferase, mitochondrial (Carnitine acetylase) (EC 2.3.1.7)"
ruditapes_c21134	telomere maintenance	DNA metabolism	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	chromatin silencing	RNA metabolism	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	double-strand break repair via nonhomologous end joining	stress response	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	double-strand break repair via nonhomologous end joining	DNA metabolism	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	chromatin assembly or disassembly	cell organization and biogenesis	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	double-strand break repair via break-induced replication	stress response	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	double-strand break repair via break-induced replication	DNA metabolism	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	response to DNA damage stimulus	stress response	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	DNA recombination	DNA metabolism	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	telomere maintenance	cell organization and biogenesis	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	DNA repair	stress response	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	DNA repair	DNA metabolism	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	double-strand break repair via homologous recombination	stress response	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	double-strand break repair via homologous recombination	DNA metabolism	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c21134	chromatin silencing at silent mating-type cassette	RNA metabolism	P	ATP-dependent DNA helicase II subunit 1 (EC 3.6.4.12) (ATP-dependent DNA helicase II subunit Ku70) (High affinity DNA-binding factor subunit 1)
ruditapes_c25337	transport	transport	P	Band 3 anion exchange protein (Anion exchange protein 1) (AE 1) (Anion exchanger 1) (Solute carrier family 4 member 1)
ruditapes_c25337	ion transport	transport	P	Band 3 anion exchange protein (Anion exchange protein 1) (AE 1) (Anion exchanger 1) (Solute carrier family 4 member 1)
ruditapes_c25337	anion transport	transport	P	Band 3 anion exchange protein (Anion exchange protein 1) (AE 1) (Anion exchanger 1) (Solute carrier family 4 member 1)
ruditapes_c22497	DNA repair	stress response	P	DNA repair protein RAD5 (EC 3.6.4.-) (Radiation sensitivity protein 5) (Revertibility protein 2)
ruditapes_c22497	DNA repair	DNA metabolism	P	DNA repair protein RAD5 (EC 3.6.4.-) (Radiation sensitivity protein 5) (Revertibility protein 2)
ruditapes_c22497	double-strand break repair	DNA metabolism	P	DNA repair protein RAD5 (EC 3.6.4.-) (Radiation sensitivity protein 5) (Revertibility protein 2)
ruditapes_c22497	response to DNA damage stimulus	stress response	P	DNA repair protein RAD5 (EC 3.6.4.-) (Radiation sensitivity protein 5) (Revertibility protein 2)
ruditapes_c22497	protein polyubiquitination	protein metabolism	P	DNA repair protein RAD5 (EC 3.6.4.-) (Radiation sensitivity protein 5) (Revertibility protein 2)
ruditapes_c22497	postreplication repair	stress response	P	DNA repair protein RAD5 (EC 3.6.4.-) (Radiation sensitivity protein 5) (Revertibility protein 2)
ruditapes_c22497	postreplication repair	DNA metabolism	P	DNA repair protein RAD5 (EC 3.6.4.-) (Radiation sensitivity protein 5) (Revertibility protein 2)
ruditapes_c22497	free ubiquitin chain polymerization	cell organization and biogenesis	P	DNA repair protein RAD5 (EC 3.6.4.-) (Radiation sensitivity protein 5) (Revertibility protein 2)
ruditapes_c22497	double-strand break repair	stress response	P	DNA repair protein RAD5 (EC 3.6.4.-) (Radiation sensitivity protein 5) (Revertibility protein 2)
ruditapes_c10840	response to DNA damage stimulus	stress response	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	double-strand break repair via single-strand annealing	stress response	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	double-strand break repair via single-strand annealing	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	DNA geometric change	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	heteroduplex formation	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	DNA repair	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	chromatin remodeling	cell organization and biogenesis	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	double-strand break repair via single-strand annealing	stress response	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	double-strand break repair via single-strand annealing	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	double-strand break repair via synthesis-dependent strand annealing	stress response	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	double-strand break repair via synthesis-dependent strand annealing	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	response to DNA damage stimulus	stress response	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	positive regulation of endodeoxyribonuclease activity	other biological processes	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	DNA repair	stress response	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	telomere maintenance via recombination	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	telomere maintenance via recombination	cell organization and biogenesis	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	chromatin remodeling	cell organization and biogenesis	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	DNA geometric change	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	telomere maintenance via recombination	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	telomere maintenance via recombination	cell organization and biogenesis	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	double-strand break repair via synthesis-dependent strand annealing	stress response	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	double-strand break repair via synthesis-dependent strand annealing	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	positive regulation of endodeoxyribonuclease activity	other biological processes	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c10840	heteroduplex formation	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	DNA repair	stress response	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c19968	DNA repair	DNA metabolism	P	DNA repair and recombination protein RAD54 (EC 3.6.4.-)
ruditapes_c17266	oogenesis	other biological processes	P	G protein-coupled receptor kinase 2 (EC 2.7.11.16)
ruditapes_c17266	signal transduction	signal transduction	P	G protein-coupled receptor kinase 2 (EC 2.7.11.16)
ruditapes_c17266	protein amino acid phosphorylation	protein metabolism	P	G protein-coupled receptor kinase 2 (EC 2.7.11.16)
ruditapes_c17266	multicellular organismal development	developmental processes	P	G protein-coupled receptor kinase 2 (EC 2.7.11.16)
ruditapes_c17266	phosphorylation	other metabolic processes	P	G protein-coupled receptor kinase 2 (EC 2.7.11.16)
ruditapes_c17266	cell differentiation	other biological processes	P	G protein-coupled receptor kinase 2 (EC 2.7.11.16)
ruditapes_c11329	cyclic nucleotide biosynthetic process	other metabolic processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	cAMP-mediated signaling	signal transduction	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	"molting cycle, chitin-based cuticle"	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	axon extension	developmental processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	cAMP-mediated signaling	signal transduction	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	olfactory learning	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	G-protein coupled receptor protein signaling pathway	signal transduction	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	sleep	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	short-term memory	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	synaptic transmission	cell-cell signaling	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	short-term memory	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	olfactory learning	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	conditioned taste aversion	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	conditioned taste aversion	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	mating behavior	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	learning or memory	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	determination of adult life span	developmental processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	mating behavior	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	response to heat	stress response	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	G-protein coupled receptor protein signaling pathway	signal transduction	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	behavioral response to ethanol	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	behavioral response to ethanol	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	learning	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	learning	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	grooming behavior	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	grooming behavior	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	memory	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	axon extension	developmental processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	axon extension	cell organization and biogenesis	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	"molting cycle, chitin-based cuticle"	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	associative learning	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	neuromuscular synaptic transmission	cell-cell signaling	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	response to oxidative stress	stress response	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	cAMP biosynthetic process	other metabolic processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	sleep	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	response to oxidative stress	stress response	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	response to heat	stress response	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	learning or memory	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	synaptic transmission	cell-cell signaling	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	courtship behavior	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	neuromuscular synaptic transmission	cell-cell signaling	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	determination of adult life span	developmental processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	cAMP biosynthetic process	other metabolic processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	axon extension	cell organization and biogenesis	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	courtship behavior	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c20974	cyclic nucleotide biosynthetic process	other metabolic processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	memory	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c11329	associative learning	other biological processes	P	Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
ruditapes_c21934	cell cycle	cell cycle and proliferation	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	chromosome organization	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	mitosis	cell cycle and proliferation	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	mitosis	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	double-strand break repair	stress response	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	double-strand break repair	DNA metabolism	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	mitotic sister chromatid cohesion	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	DNA recombination	DNA metabolism	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	mitotic sister chromatid segregation	cell cycle and proliferation	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	mitotic sister chromatid segregation	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	cell division	other biological processes	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	DNA repair	stress response	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	DNA repair	DNA metabolism	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	sister chromatid cohesion	cell cycle and proliferation	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	sister chromatid cohesion	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	chromosome condensation	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c21934	mitotic sister chromatid cohesion	cell cycle and proliferation	P	Structural maintenance of chromosomes protein 1 (DA-box protein SMC1)
ruditapes_c15759	indoleacetic acid biosynthetic process	other metabolic processes	P	Nitrilase 2 (EC 3.5.5.1)
ruditapes_c15759	nitrogen compound metabolic process	other metabolic processes	P	Nitrilase 2 (EC 3.5.5.1)
ruditapes_c15759	response to cadmium ion	other biological processes	P	Nitrilase 2 (EC 3.5.5.1)
ruditapes_c27546	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase large subunit (EC 1.17.4.1) (Ribonucleotide reductase large subunit)
ruditapes_c27546	metabolic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase large subunit (EC 1.17.4.1) (Ribonucleotide reductase large subunit)
ruditapes_c27546	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase large subunit (EC 1.17.4.1) (Ribonucleotide reductase large subunit)
ruditapes2_c2709	response to DNA damage stimulus	stress response	P	Putative nuclease G5 (EC 3.1.-.-)
ruditapes2_c2709	DNA repair	stress response	P	Putative nuclease G5 (EC 3.1.-.-)
ruditapes2_c2709	DNA repair	DNA metabolism	P	Putative nuclease G5 (EC 3.1.-.-)
ruditapes_c16529	negative regulation of peptidase activity	other biological processes	P	Anosmin-1 (Kallmann syndrome protein homolog)
ruditapes_c16529	cell adhesion	cell adhesion	P	Anosmin-1 (Kallmann syndrome protein homolog)
ruditapes_c29053	dephosphorylation	other metabolic processes	P	Dual specificity protein phosphatase H1 (EC 3.1.3.-) (EC 3.1.3.48) (Late protein H1)
ruditapes_c29053	interspecies interaction between organisms	other biological processes	P	Dual specificity protein phosphatase H1 (EC 3.1.3.-) (EC 3.1.3.48) (Late protein H1)
ruditapes_c29053	protein amino acid dephosphorylation	protein metabolism	P	Dual specificity protein phosphatase H1 (EC 3.1.3.-) (EC 3.1.3.48) (Late protein H1)
ruditapes_c29053	evasion by virus of host immune response	stress response	P	Dual specificity protein phosphatase H1 (EC 3.1.3.-) (EC 3.1.3.48) (Late protein H1)
ruditapes_c3276	peptidyl-histidine phosphorylation	protein metabolism	P	Sensor histidine kinase SpaK (EC 2.7.13.3) (Subtilin biosynthesis sensor protein SpaK)
ruditapes_c3276	phosphorylation	other metabolic processes	P	Sensor histidine kinase SpaK (EC 2.7.13.3) (Subtilin biosynthesis sensor protein SpaK)
ruditapes_c3276	signal transduction	signal transduction	P	Sensor histidine kinase SpaK (EC 2.7.13.3) (Subtilin biosynthesis sensor protein SpaK)
ruditapes_c3276	two-component signal transduction system (phosphorelay)	signal transduction	P	Sensor histidine kinase SpaK (EC 2.7.13.3) (Subtilin biosynthesis sensor protein SpaK)
ruditapes_c36556	galactose metabolic process	other metabolic processes	P	UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
ruditapes_c36556	carbohydrate metabolic process	other metabolic processes	P	UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
ruditapes_c36556	cellular metabolic process	other metabolic processes	P	UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
ruditapes_c4197	lipid metabolic process	other metabolic processes	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	positive regulation of plasma membrane long-chain fatty acid transport	transport	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	metabolic process	other metabolic processes	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	response to gravity	other biological processes	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	response to steroid hormone stimulus	other biological processes	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	response to nutrient	other biological processes	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	long-chain fatty acid metabolic process	other metabolic processes	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	response to hypoxia	stress response	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	cellular response to insulin stimulus	other biological processes	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	phospholipid biosynthetic process	other metabolic processes	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	fatty acid metabolic process	other metabolic processes	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	positive regulation of neuron projection development	developmental processes	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	positive regulation of neuron projection development	cell organization and biogenesis	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c4197	neuron development	developmental processes	P	"Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme)"
ruditapes_c27461	mitosis	cell cycle and proliferation	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c27461	mitosis	cell organization and biogenesis	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c22615	mitosis	cell cycle and proliferation	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c22615	mitosis	cell organization and biogenesis	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c27461	proteolysis	protein metabolism	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c27461	chromosome segregation	other biological processes	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c27461	cell cycle	cell cycle and proliferation	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c22615	proteolysis	protein metabolism	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c22615	chromosome segregation	other biological processes	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c22615	cell cycle	cell cycle and proliferation	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c27461	cell division	other biological processes	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c22615	cell division	other biological processes	P	Separin (EC 3.4.22.49) (Cell division-associated protein bimB) (Separase)
ruditapes_c27154	blood vessel maturation	developmental processes	P	Cadherin-5 (7B4 antigen) (Vascular endothelial cadherin) (VE-cadherin) (CD antigen CD144)
ruditapes_c27154	cell-cell junction organization	cell organization and biogenesis	P	Cadherin-5 (7B4 antigen) (Vascular endothelial cadherin) (VE-cadherin) (CD antigen CD144)
ruditapes_c27154	homophilic cell adhesion	cell adhesion	P	Cadherin-5 (7B4 antigen) (Vascular endothelial cadherin) (VE-cadherin) (CD antigen CD144)
ruditapes_c27154	cell adhesion	cell adhesion	P	Cadherin-5 (7B4 antigen) (Vascular endothelial cadherin) (VE-cadherin) (CD antigen CD144)
ruditapes_c27154	negative regulation of cell proliferation	cell cycle and proliferation	P	Cadherin-5 (7B4 antigen) (Vascular endothelial cadherin) (VE-cadherin) (CD antigen CD144)
ruditapes_c27154	cell junction assembly	cell organization and biogenesis	P	Cadherin-5 (7B4 antigen) (Vascular endothelial cadherin) (VE-cadherin) (CD antigen CD144)
ruditapes_c27154	adherens junction organization	cell organization and biogenesis	P	Cadherin-5 (7B4 antigen) (Vascular endothelial cadherin) (VE-cadherin) (CD antigen CD144)
ruditapes_c18817	metabolic process	other metabolic processes	P	Tyrosinase (EC 1.14.18.1) (Monophenol monooxygenase)
ruditapes_c18817	melanin biosynthetic process	other metabolic processes	P	Tyrosinase (EC 1.14.18.1) (Monophenol monooxygenase)
ruditapes_c18817	oxidation reduction	other metabolic processes	P	Tyrosinase (EC 1.14.18.1) (Monophenol monooxygenase)
ruditapes2_c312	tricarboxylic acid cycle	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) (Fragment)"
ruditapes_c32323	isocitrate metabolic process	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) (Fragment)"
ruditapes_c32323	oxidation reduction	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) (Fragment)"
ruditapes_c32323	glyoxylate cycle	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) (Fragment)"
ruditapes2_c312	2-oxoglutarate metabolic process	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) (Fragment)"
ruditapes2_c312	isocitrate metabolic process	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) (Fragment)"
ruditapes2_c312	oxidation reduction	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) (Fragment)"
ruditapes2_c312	glyoxylate cycle	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) (Fragment)"
ruditapes_c32323	2-oxoglutarate metabolic process	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) (Fragment)"
ruditapes_c32323	tricarboxylic acid cycle	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) (Fragment)"
ruditapes_lrc34555	hopanoid biosynthetic process	other metabolic processes	P	Squalene--hopene cyclase (EC 4.2.1.129) (EC 5.4.99.17) (Squalene--hopanol cyclase)
ruditapes_lrc37254	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc4486	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc34082	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc4486	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes2_lrc4486	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc32598	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc4161	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc33560	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc4161	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc32598	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc33560	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes_lrc33560	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc32598	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc34082	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes_lrc34082	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc2287	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc34082	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc4161	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes_lrc36194	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc37254	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc34733	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes_lrc34733	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc34733	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc32598	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes_lrc32919	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc32919	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes_lrc32919	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc4854	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc32421	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc36194	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes_lrc33560	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc4854	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc2287	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes2_lrc2287	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc4486	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc36194	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc32421	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc34733	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc4161	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc4854	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes2_lrc4854	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes2_lrc2287	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc32421	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc37254	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes_lrc37254	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc32919	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc36194	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-12
ruditapes_lrc32421	sequestering of actin monomers	protein metabolism	P	Thymosin beta-12
ruditapes_c13528	oxidation reduction	other metabolic processes	P	Cytochrome P450 4F1 (EC 1.14.14.1) (CYPIVF1) (Cytochrome P450-A3)
ruditapes_c13528	arachidonic acid metabolic process	other metabolic processes	P	Cytochrome P450 4F1 (EC 1.14.14.1) (CYPIVF1) (Cytochrome P450-A3)
ruditapes_c13528	response to toxin	other biological processes	P	Cytochrome P450 4F1 (EC 1.14.14.1) (CYPIVF1) (Cytochrome P450-A3)
ruditapes_c13528	icosanoid metabolic process	other metabolic processes	P	Cytochrome P450 4F1 (EC 1.14.14.1) (CYPIVF1) (Cytochrome P450-A3)
ruditapes_c32576	cytokinesis	other biological processes	P	Exocyst complex component SEC3 (Protein PSL1)
ruditapes_c32576	vesicle docking during exocytosis	transport	P	Exocyst complex component SEC3 (Protein PSL1)
ruditapes_c32576	vesicle fusion	transport	P	Exocyst complex component SEC3 (Protein PSL1)
ruditapes_c32576	vesicle fusion	cell organization and biogenesis	P	Exocyst complex component SEC3 (Protein PSL1)
ruditapes_c32576	bipolar cellular bud site selection	cell organization and biogenesis	P	Exocyst complex component SEC3 (Protein PSL1)
ruditapes_c32576	exocytosis	transport	P	Exocyst complex component SEC3 (Protein PSL1)
ruditapes_c32576	Golgi to plasma membrane transport	transport	P	Exocyst complex component SEC3 (Protein PSL1)
ruditapes_c32576	protein transport	transport	P	Exocyst complex component SEC3 (Protein PSL1)
ruditapes_c32576	transport	transport	P	Exocyst complex component SEC3 (Protein PSL1)
ruditapes_c26856	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor tau 131 kDa subunit (TFIIIC 131 kDa subunit) (Transcription factor C subunit 4)
ruditapes_c26856	transcription initiation from RNA polymerase III promoter	RNA metabolism	P	Transcription factor tau 131 kDa subunit (TFIIIC 131 kDa subunit) (Transcription factor C subunit 4)
ruditapes_c26856	transcription initiation from RNA polymerase III promoter	cell organization and biogenesis	P	Transcription factor tau 131 kDa subunit (TFIIIC 131 kDa subunit) (Transcription factor C subunit 4)
ruditapes_c26856	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor tau 131 kDa subunit (TFIIIC 131 kDa subunit) (Transcription factor C subunit 4)
ruditapes_c26543	transport	transport	P	Putative osmoprotectant uptake system substrate-binding protein OsmF
ruditapes2_c2985	electron transport chain	other metabolic processes	P	Protein DVU
ruditapes2_c2985	transport	transport	P	Protein DVU
ruditapes_c5207	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	negative regulation of cell proliferation	cell cycle and proliferation	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	establishment of planar polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	establishment of ommatidial polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	establishment of ommatidial polarity	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	homophilic cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	establishment of epithelial cell apical/basal polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	establishment of epithelial cell apical/basal polarity	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	cell-cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	negative regulation of growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	calcium-dependent cell-cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	establishment of tissue polarity	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	establishment of body hair orientation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	homophilic cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	establishment of body hair orientation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	establishment of imaginal disc-derived wing hair orientation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	establishment of tissue polarity	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	cell proliferation	cell cycle and proliferation	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	regulation of growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	calcium-dependent cell-cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	peptide cross-linking	protein metabolism	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	ommatidial rotation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	imaginal disc growth	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	"regulation of tube length, open tracheal system"	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	negative regulation of growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	homophilic cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	establishment of imaginal disc-derived wing hair orientation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	establishment of ommatidial polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	establishment of ommatidial polarity	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	regulation of organ growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	ommatidial rotation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	ommatidial rotation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	ommatidial rotation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	"regulation of tube length, open tracheal system"	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	establishment of imaginal disc-derived wing hair orientation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	establishment of imaginal disc-derived wing hair orientation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	negative regulation of cell proliferation	cell cycle and proliferation	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	establishment of planar polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	imaginal disc growth	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	establishment of epithelial cell apical/basal polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	establishment of epithelial cell apical/basal polarity	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	establishment of tissue polarity	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	cell-cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	cell morphogenesis involved in differentiation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	calcium-dependent cell-cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	ommatidial rotation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	ommatidial rotation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	regulation of organ growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	establishment of planar polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	imaginal disc growth	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	negative regulation of imaginal disc growth	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	negative regulation of cell proliferation	cell cycle and proliferation	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	cell morphogenesis involved in differentiation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	imaginal disc-derived wing morphogenesis	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	cell-cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	peptide cross-linking	protein metabolism	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	peptide cross-linking	protein metabolism	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	cell proliferation	cell cycle and proliferation	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	establishment of body hair orientation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	cell proliferation	cell cycle and proliferation	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	imaginal disc-derived wing morphogenesis	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	establishment of ommatidial polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	establishment of ommatidial polarity	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	regulation of growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	negative regulation of growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	establishment of ommatidial polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	establishment of ommatidial polarity	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	homophilic cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	calcium-dependent cell-cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	cell-cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	imaginal disc growth	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	establishment of body hair orientation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	establishment of epithelial cell apical/basal polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	establishment of epithelial cell apical/basal polarity	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	"regulation of tube length, open tracheal system"	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	establishment of epithelial cell apical/basal polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	establishment of epithelial cell apical/basal polarity	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	cell morphogenesis involved in differentiation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	establishment of tissue polarity	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	establishment of imaginal disc-derived wing hair orientation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	imaginal disc growth	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	regulation of growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	calcium-dependent cell-cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	regulation of growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	ommatidial rotation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	ommatidial rotation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	ommatidial rotation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	ommatidial rotation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	cell-cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	establishment of imaginal disc-derived wing hair orientation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	establishment of imaginal disc-derived wing hair orientation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	imaginal disc-derived wing morphogenesis	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	establishment of planar polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	negative regulation of cell proliferation	cell cycle and proliferation	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	regulation of organ growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	negative regulation of imaginal disc growth	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	negative regulation of growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	cell proliferation	cell cycle and proliferation	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	negative regulation of imaginal disc growth	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	equator specification	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	equator specification	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	establishment of imaginal disc-derived wing hair orientation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	equator specification	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	imaginal disc-derived wing morphogenesis	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	"regulation of tube length, open tracheal system"	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	cell morphogenesis involved in differentiation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	regulation of organ growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	negative regulation of growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	establishment of ommatidial polarity	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	"regulation of tube length, open tracheal system"	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	peptide cross-linking	protein metabolism	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	regulation of organ growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	establishment of planar polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	equator specification	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	equator specification	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	cell proliferation	cell cycle and proliferation	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	equator specification	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	equator specification	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	establishment of ommatidial polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	equator specification	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	equator specification	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	establishment of tissue polarity	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	negative regulation of imaginal disc growth	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	cell morphogenesis involved in differentiation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	equator specification	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	negative regulation of cell proliferation	cell cycle and proliferation	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5012	negative regulation of imaginal disc growth	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	imaginal disc-derived wing morphogenesis	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	homophilic cell adhesion	cell adhesion	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	establishment of body hair orientation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c13639	regulation of growth	other biological processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c5207	peptide cross-linking	protein metabolism	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	establishment of imaginal disc-derived wing hair orientation	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1150	establishment of imaginal disc-derived wing hair orientation	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	establishment of epithelial cell apical/basal polarity	developmental processes	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes_c963	establishment of epithelial cell apical/basal polarity	cell organization and biogenesis	P	Cadherin-related tumor suppressor (Protein fat)
ruditapes2_c1288	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Protein C (Capsid protein) (Core protein); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (NS5)]
ruditapes_lrc23499	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein C (Capsid protein) (Core protein); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (NS5)]
ruditapes2_c1288	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein C (Capsid protein) (Core protein); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (NS5)]
ruditapes_lrc23499	methylation	other metabolic processes	P	Genome polyprotein [Cleaved into: Protein C (Capsid protein) (Core protein); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (NS5)]
ruditapes_lrc23499	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Protein C (Capsid protein) (Core protein); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (NS5)]
ruditapes2_c1288	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein C (Capsid protein) (Core protein); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (NS5)]
ruditapes_lrc23499	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein C (Capsid protein) (Core protein); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (NS5)]
ruditapes_lrc23499	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein C (Capsid protein) (Core protein); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (NS5)]
ruditapes2_c1288	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein C (Capsid protein) (Core protein); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (NS5)]
ruditapes2_c1288	methylation	other metabolic processes	P	Genome polyprotein [Cleaved into: Protein C (Capsid protein) (Core protein); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (NS5)]
ruditapes2_c2148	activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger	signal transduction	P	Kappa-type opioid receptor (K-OR-1) (KOR-1) (MSL-1)
ruditapes2_c2148	G-protein coupled receptor protein signaling pathway	signal transduction	P	Kappa-type opioid receptor (K-OR-1) (KOR-1) (MSL-1)
ruditapes2_c2148	signal transduction	signal transduction	P	Kappa-type opioid receptor (K-OR-1) (KOR-1) (MSL-1)
ruditapes_c29124	homophilic cell adhesion	cell adhesion	P	Desmocollin-2 (Epithelial type 2 desmocollin) (Fragment)
ruditapes_c29124	cell adhesion	cell adhesion	P	Desmocollin-2 (Epithelial type 2 desmocollin) (Fragment)
ruditapes_c29162	anaerobic respiration	other metabolic processes	P	NADH-quinone oxidoreductase subunit L (EC 1.6.99.5) (NADH dehydrogenase I subunit L) (NDH-1 subunit L) (NUO12)
ruditapes_c29162	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit L (EC 1.6.99.5) (NADH dehydrogenase I subunit L) (NDH-1 subunit L) (NUO12)
ruditapes_c29162	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-quinone oxidoreductase subunit L (EC 1.6.99.5) (NADH dehydrogenase I subunit L) (NDH-1 subunit L) (NUO12)
ruditapes_c1162	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	DNA repair	stress response	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	DNA repair	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	DNA strand elongation during DNA replication	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	leading strand elongation	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	S phase of mitotic cell cycle	cell cycle and proliferation	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	double-strand break repair via nonhomologous end joining	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	lagging strand elongation	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	DNA replication checkpoint	cell cycle and proliferation	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	DNA replication checkpoint	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	DNA replication initiation	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	cell proliferation	cell cycle and proliferation	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	DNA synthesis during DNA repair	stress response	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	DNA synthesis during DNA repair	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	DNA replication	DNA metabolism	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c1162	double-strand break repair via nonhomologous end joining	stress response	P	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)
ruditapes_c15637	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-6 chain (Alpha-6-tubulin)
ruditapes_c15637	GTP catabolic process	other metabolic processes	P	Tubulin alpha-6 chain (Alpha-6-tubulin)
ruditapes_c15637	microtubule-based movement	other biological processes	P	Tubulin alpha-6 chain (Alpha-6-tubulin)
ruditapes_c15637	response to cadmium ion	other biological processes	P	Tubulin alpha-6 chain (Alpha-6-tubulin)
ruditapes_c15637	microtubule-based process	other biological processes	P	Tubulin alpha-6 chain (Alpha-6-tubulin)
ruditapes_c25365	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes_c25365	microtubule-based movement	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_c25365	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc27500	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YfiE
ruditapes_lrc27500	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YfiE
ruditapes_c10285	induction by virus of cell-cell fusion in host	other biological processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	positive regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	regulation of T cell activation	other biological processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	cell adhesion	cell adhesion	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	positive regulation of T cell activation	other biological processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	positive regulation of calcium-mediated signaling	signal transduction	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	immune response	other biological processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	cytokine production	other biological processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	maintenance of protein location in cell	other biological processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	protein palmitoleylation	protein metabolism	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	T cell differentiation	developmental processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	positive regulation of protein kinase activity	other metabolic processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	cell surface receptor linked signal transduction	signal transduction	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c10285	T cell selection	developmental processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c938	cellular response to cold	stress response	P	Zinc finger protein MSN2 (Multicopy suppressor of SNF1 protein 2)
ruditapes_c938	cellular response to hydrogen peroxide	stress response	P	Zinc finger protein MSN2 (Multicopy suppressor of SNF1 protein 2)
ruditapes_c938	replicative cell aging	other biological processes	P	Zinc finger protein MSN2 (Multicopy suppressor of SNF1 protein 2)
ruditapes_c938	cellular response to glucose starvation	stress response	P	Zinc finger protein MSN2 (Multicopy suppressor of SNF1 protein 2)
ruditapes_c938	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein MSN2 (Multicopy suppressor of SNF1 protein 2)
ruditapes_c938	regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation	stress response	P	Zinc finger protein MSN2 (Multicopy suppressor of SNF1 protein 2)
ruditapes_c938	regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation	RNA metabolism	P	Zinc finger protein MSN2 (Multicopy suppressor of SNF1 protein 2)
ruditapes_c938	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein MSN2 (Multicopy suppressor of SNF1 protein 2)
ruditapes_c938	cellular response to heat	stress response	P	Zinc finger protein MSN2 (Multicopy suppressor of SNF1 protein 2)
ruditapes_c938	chromatin remodeling	cell organization and biogenesis	P	Zinc finger protein MSN2 (Multicopy suppressor of SNF1 protein 2)
ruditapes_c938	cellular response to amino acid starvation	stress response	P	Zinc finger protein MSN2 (Multicopy suppressor of SNF1 protein 2)
ruditapes_lrc16361	metabolic process	other metabolic processes	P	Butyrate--acetoacetate CoA-transferase subunit A (Coat A) (EC 2.8.3.9) (Acetoacetyl-CoA:acetate/butyrate:CoA transferase subunit A)
ruditapes_lrc18354	tRNA processing	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (Transfer RNA methyltransferase 2) (tRNA(m5U54)-methyltransferase)
ruditapes_lrc18354	RNA processing	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (Transfer RNA methyltransferase 2) (tRNA(m5U54)-methyltransferase)
ruditapes_lrc18354	double-strand break repair	stress response	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (Transfer RNA methyltransferase 2) (tRNA(m5U54)-methyltransferase)
ruditapes_lrc18354	double-strand break repair	DNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (Transfer RNA methyltransferase 2) (tRNA(m5U54)-methyltransferase)
ruditapes_lrc18354	methylation	other metabolic processes	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (Transfer RNA methyltransferase 2) (tRNA(m5U54)-methyltransferase)
ruditapes_lrc18354	tRNA modification	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (Transfer RNA methyltransferase 2) (tRNA(m5U54)-methyltransferase)
ruditapes_lrc18354	DNA repair	stress response	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (Transfer RNA methyltransferase 2) (tRNA(m5U54)-methyltransferase)
ruditapes_lrc18354	DNA repair	DNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (Transfer RNA methyltransferase 2) (tRNA(m5U54)-methyltransferase)
ruditapes_lrc18354	RNA methylation	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (Transfer RNA methyltransferase 2) (tRNA(m5U54)-methyltransferase)
ruditapes_c6599	regulation of epidermal growth factor receptor activity	signal transduction	P	Pro-variola growth factor (Pro-VGF) [Cleaved into: Variola growth factor (VGF) (Secreted epidermal growth factor-like)]
ruditapes_c6599	regulation of epidermal growth factor receptor activity	other metabolic processes	P	Pro-variola growth factor (Pro-VGF) [Cleaved into: Variola growth factor (VGF) (Secreted epidermal growth factor-like)]
ruditapes_c6599	interspecies interaction between organisms	other biological processes	P	Pro-variola growth factor (Pro-VGF) [Cleaved into: Variola growth factor (VGF) (Secreted epidermal growth factor-like)]
ruditapes_c18707	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase 133 kDa polypeptide (EC 2.7.7.6)
ruditapes2_lrc4187	ATP metabolic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium-dependent ATPase subunit beta-3)
ruditapes2_lrc4187	sodium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium-dependent ATPase subunit beta-3)
ruditapes2_lrc4187	ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium-dependent ATPase subunit beta-3)
ruditapes2_lrc4187	transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium-dependent ATPase subunit beta-3)
ruditapes2_lrc4187	potassium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium-dependent ATPase subunit beta-3)
ruditapes_c30233	regulation of translation	protein metabolism	P	Translational activator GCN1
ruditapes_c7576	regulation of translation	protein metabolism	P	Translational activator GCN1
ruditapes_c30233	regulation of translational elongation	protein metabolism	P	Translational activator GCN1
ruditapes_c7576	regulation of translational elongation	protein metabolism	P	Translational activator GCN1
ruditapes_c10266	cytoplasmic microtubule organization	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c10266	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c10266	microtubule-based movement	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c12689	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Viral transcription regulator p47
ruditapes_c12689	regulation of viral transcription	RNA metabolism	P	Viral transcription regulator p47
ruditapes_c12689	"transcription, DNA-dependent"	RNA metabolism	P	Viral transcription regulator p47
ruditapes_c9621	transport	transport	P	Vacuolar protein sorting-associated protein 35 (Vacuolar protein-targeting protein 7)
ruditapes_c9621	"retrograde transport, endosome to Golgi"	transport	P	Vacuolar protein sorting-associated protein 35 (Vacuolar protein-targeting protein 7)
ruditapes_c9621	protein transport	transport	P	Vacuolar protein sorting-associated protein 35 (Vacuolar protein-targeting protein 7)
ruditapes_c9621	protein retention in Golgi apparatus	other biological processes	P	Vacuolar protein sorting-associated protein 35 (Vacuolar protein-targeting protein 7)
ruditapes_c19322	transcription initiation from RNA polymerase III promoter	RNA metabolism	P	Transcription factor tau 138 kDa subunit (TFIIIC 138 kDa subunit) (Transcription factor C subunit 3)
ruditapes_c19322	transcription initiation from RNA polymerase III promoter	cell organization and biogenesis	P	Transcription factor tau 138 kDa subunit (TFIIIC 138 kDa subunit) (Transcription factor C subunit 3)
ruditapes_c19322	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor tau 138 kDa subunit (TFIIIC 138 kDa subunit) (Transcription factor C subunit 3)
ruditapes_c19322	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor tau 138 kDa subunit (TFIIIC 138 kDa subunit) (Transcription factor C subunit 3)
ruditapes_c38063	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c38063	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c38063	transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c38063	ion transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c38063	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c38063	proton transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c25755	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase chk1 (EC 2.7.11.1) (Checkpoint kinase 1)
ruditapes_c25755	DNA damage checkpoint	cell cycle and proliferation	P	Serine/threonine-protein kinase chk1 (EC 2.7.11.1) (Checkpoint kinase 1)
ruditapes_c25755	DNA damage checkpoint	signal transduction	P	Serine/threonine-protein kinase chk1 (EC 2.7.11.1) (Checkpoint kinase 1)
ruditapes_c25755	DNA damage checkpoint	stress response	P	Serine/threonine-protein kinase chk1 (EC 2.7.11.1) (Checkpoint kinase 1)
ruditapes_c25755	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase chk1 (EC 2.7.11.1) (Checkpoint kinase 1)
ruditapes_c25755	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase chk1 (EC 2.7.11.1) (Checkpoint kinase 1)
ruditapes_c25755	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase chk1 (EC 2.7.11.1) (Checkpoint kinase 1)
ruditapes_c28393	oogenesis	other biological processes	P	P granule abnormality protein 2
ruditapes_c28393	reproduction	other biological processes	P	P granule abnormality protein 2
ruditapes_c28393	multicellular organismal development	developmental processes	P	P granule abnormality protein 2
ruditapes_c28393	cell differentiation	other biological processes	P	P granule abnormality protein 2
ruditapes_c28393	determination of adult life span	developmental processes	P	P granule abnormality protein 2
ruditapes_c15360	metabolic process	other metabolic processes	P	Putative tyrosinase-like protein tyr-1
ruditapes_c15360	oxidation reduction	other metabolic processes	P	Putative tyrosinase-like protein tyr-1
ruditapes_c10862	oxidation reduction	other metabolic processes	P	Putative tyrosinase-like protein tyr-1
ruditapes_c10862	metabolic process	other metabolic processes	P	Putative tyrosinase-like protein tyr-1
ruditapes_c20301	transmembrane transport	transport	P	Uncharacterized transporter C02C2.4
ruditapes_c20301	ion transport	transport	P	Uncharacterized transporter C02C2.4
ruditapes_c20301	sodium ion transport	transport	P	Uncharacterized transporter C02C2.4
ruditapes_c20301	transport	transport	P	Uncharacterized transporter C02C2.4
ruditapes_c14557	feminization of hermaphroditic germ-line	developmental processes	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_c14557	nematode larval development	developmental processes	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_c14557	lipid storage	other biological processes	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_c14557	locomotion	other biological processes	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_c14557	germ cell development	other biological processes	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_c14557	hermaphrodite genitalia development	developmental processes	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_c14557	determination of adult life span	developmental processes	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_c14557	reproduction	other biological processes	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_c14557	embryonic development ending in birth or egg hatching	developmental processes	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_c14557	growth	other biological processes	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_c14557	receptor-mediated endocytosis	transport	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_c14557	receptor-mediated endocytosis	cell organization and biogenesis	P	Protein BUD31 homolog (Protein G10 homolog)
ruditapes_s37222	sodium ion transport	transport	P	Putative sodium/calcium exchanger 6 (Na(+)/Ca(2+)-exchange protein 6)
ruditapes_s37222	transport	transport	P	Putative sodium/calcium exchanger 6 (Na(+)/Ca(2+)-exchange protein 6)
ruditapes_s37222	calcium ion transport	transport	P	Putative sodium/calcium exchanger 6 (Na(+)/Ca(2+)-exchange protein 6)
ruditapes_s37222	transmembrane transport	transport	P	Putative sodium/calcium exchanger 6 (Na(+)/Ca(2+)-exchange protein 6)
ruditapes_s37222	ion transport	transport	P	Putative sodium/calcium exchanger 6 (Na(+)/Ca(2+)-exchange protein 6)
ruditapes_c16239	mRNA transport	transport	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c16239	protein transport	transport	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c16239	positive regulation of growth rate	other biological processes	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c16239	multicellular organismal development	developmental processes	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c16239	embryonic development ending in birth or egg hatching	developmental processes	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c21769	positive regulation of growth rate	other biological processes	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c21769	embryonic development ending in birth or egg hatching	developmental processes	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c21769	transport	transport	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c21769	mRNA transport	transport	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c21769	multicellular organismal development	developmental processes	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c16239	transport	transport	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c21769	protein transport	transport	P	Nuclear pore complex protein 15 (Nucleoporin npp-15)
ruditapes_c7666	signal transduction	signal transduction	P	Abnormal cell migration protein 10
ruditapes_c7666	positive regulation of growth rate	other biological processes	P	Abnormal cell migration protein 10
ruditapes_c7666	tail morphogenesis	other biological processes	P	Abnormal cell migration protein 10
ruditapes_c7666	neuron migration	developmental processes	P	Abnormal cell migration protein 10
ruditapes_c7666	oviposition	other biological processes	P	Abnormal cell migration protein 10
ruditapes_c7666	multicellular organismal development	developmental processes	P	Abnormal cell migration protein 10
ruditapes_c7666	regulation of cell migration	other biological processes	P	Abnormal cell migration protein 10
ruditapes_c7666	mesodermal cell migration	developmental processes	P	Abnormal cell migration protein 10
ruditapes_c7666	locomotion	other biological processes	P	Abnormal cell migration protein 10
ruditapes_c7666	embryonic development ending in birth or egg hatching	developmental processes	P	Abnormal cell migration protein 10
ruditapes_c7666	vulval development	developmental processes	P	Abnormal cell migration protein 10
ruditapes_c7666	axon regeneration	stress response	P	Abnormal cell migration protein 10
ruditapes_c7666	axon regeneration	developmental processes	P	Abnormal cell migration protein 10
ruditapes_c7666	axon regeneration	cell organization and biogenesis	P	Abnormal cell migration protein 10
ruditapes_c19561	metabolic process	other metabolic processes	P	Ancient ubiquitous protein 1 homolog
ruditapes_c26414	mitosis	cell cycle and proliferation	P	Abnormal embryogenesis protein 30
ruditapes_c26414	mitosis	cell organization and biogenesis	P	Abnormal embryogenesis protein 30
ruditapes_c26414	embryonic development ending in birth or egg hatching	developmental processes	P	Abnormal embryogenesis protein 30
ruditapes_c26414	cell division	other biological processes	P	Abnormal embryogenesis protein 30
ruditapes_c26414	"determination of anterior/posterior axis, embryo"	developmental processes	P	Abnormal embryogenesis protein 30
ruditapes_c26414	reproduction	other biological processes	P	Abnormal embryogenesis protein 30
ruditapes_c26414	cell cycle	cell cycle and proliferation	P	Abnormal embryogenesis protein 30
ruditapes_c26414	hermaphrodite genitalia development	developmental processes	P	Abnormal embryogenesis protein 30
ruditapes_c26414	meiosis	cell cycle and proliferation	P	Abnormal embryogenesis protein 30
ruditapes_c11009	determination of adult life span	developmental processes	P	"Probable aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c11009	RNA interference	other metabolic processes	P	"Probable aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c11009	metabolic process	other metabolic processes	P	"Probable aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c11009	nematode larval development	developmental processes	P	"Probable aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c11009	reproduction	other biological processes	P	"Probable aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c11009	embryonic development ending in birth or egg hatching	developmental processes	P	"Probable aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c11009	locomotion	other biological processes	P	"Probable aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c11009	hermaphrodite genitalia development	developmental processes	P	"Probable aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c11009	growth	other biological processes	P	"Probable aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c11009	tricarboxylic acid cycle	other metabolic processes	P	"Probable aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_s39975	growth	other biological processes	P	Probable elongation factor 1-beta/1-delta 1 (EF-1-beta/delta 1)
ruditapes_s39975	translation	protein metabolism	P	Probable elongation factor 1-beta/1-delta 1 (EF-1-beta/delta 1)
ruditapes_s39975	positive regulation of growth rate	other biological processes	P	Probable elongation factor 1-beta/1-delta 1 (EF-1-beta/delta 1)
ruditapes_s39975	receptor-mediated endocytosis	transport	P	Probable elongation factor 1-beta/1-delta 1 (EF-1-beta/delta 1)
ruditapes_s39975	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable elongation factor 1-beta/1-delta 1 (EF-1-beta/delta 1)
ruditapes_s39975	nematode larval development	developmental processes	P	Probable elongation factor 1-beta/1-delta 1 (EF-1-beta/delta 1)
ruditapes_s39975	translational elongation	protein metabolism	P	Probable elongation factor 1-beta/1-delta 1 (EF-1-beta/delta 1)
ruditapes_s39975	embryonic development ending in birth or egg hatching	developmental processes	P	Probable elongation factor 1-beta/1-delta 1 (EF-1-beta/delta 1)
ruditapes_lrc35921	transport	transport	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_lrc35921	growth	other biological processes	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_c5208	apoptosis	death	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_lrc35921	proton transport	transport	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_lrc35921	ion transport	transport	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_c5208	proton transport	transport	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_lrc35921	nematode larval development	developmental processes	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_c5208	embryonic development ending in birth or egg hatching	developmental processes	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_c5208	ion transport	transport	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_c5208	nematode larval development	developmental processes	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_c5208	growth	other biological processes	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_c5208	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_c5208	reproduction	other biological processes	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_lrc35921	apoptosis	death	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_lrc35921	reproduction	other biological processes	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_lrc35921	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_lrc35921	embryonic development ending in birth or egg hatching	developmental processes	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_c5208	transport	transport	P	V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D)
ruditapes_c13839	embryonic development ending in birth or egg hatching	developmental processes	P	Clustered mitochondria protein homolog
ruditapes_lrc37334	embryonic development ending in birth or egg hatching	developmental processes	P	Clustered mitochondria protein homolog
ruditapes_c10754	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Helix-loop-helix protein 11
ruditapes_c10754	"transcription, DNA-dependent"	RNA metabolism	P	Helix-loop-helix protein 11
ruditapes_s39826	locomotion	other biological processes	P	Uncharacterized protein K04H4.2
ruditapes_s39826	dendrite development	developmental processes	P	Uncharacterized protein K04H4.2
ruditapes_s39826	dendrite development	cell organization and biogenesis	P	Uncharacterized protein K04H4.2
ruditapes2_c3730	locomotion	other biological processes	P	Uncharacterized protein K04H4.2
ruditapes_s39826	growth	other biological processes	P	Uncharacterized protein K04H4.2
ruditapes2_c3730	nematode larval development	developmental processes	P	Uncharacterized protein K04H4.2
ruditapes_lrc34052	dendrite development	cell organization and biogenesis	P	Uncharacterized protein K04H4.2
ruditapes_lrc34052	positive regulation of growth rate	other biological processes	P	Uncharacterized protein K04H4.2
ruditapes2_c3730	growth	other biological processes	P	Uncharacterized protein K04H4.2
ruditapes_s39826	positive regulation of growth rate	other biological processes	P	Uncharacterized protein K04H4.2
ruditapes2_c3730	dendrite development	cell organization and biogenesis	P	Uncharacterized protein K04H4.2
ruditapes2_c3730	positive regulation of growth rate	other biological processes	P	Uncharacterized protein K04H4.2
ruditapes_lrc34052	growth	other biological processes	P	Uncharacterized protein K04H4.2
ruditapes_s39826	chitin metabolic process	other metabolic processes	P	Uncharacterized protein K04H4.2
ruditapes_lrc34052	dendrite development	developmental processes	P	Uncharacterized protein K04H4.2
ruditapes_lrc34052	nematode larval development	developmental processes	P	Uncharacterized protein K04H4.2
ruditapes_lrc34052	chitin metabolic process	other metabolic processes	P	Uncharacterized protein K04H4.2
ruditapes_s39826	nematode larval development	developmental processes	P	Uncharacterized protein K04H4.2
ruditapes2_c3730	chitin metabolic process	other metabolic processes	P	Uncharacterized protein K04H4.2
ruditapes_lrc34052	locomotion	other biological processes	P	Uncharacterized protein K04H4.2
ruditapes2_c3730	dendrite development	developmental processes	P	Uncharacterized protein K04H4.2
ruditapes_c25968	oxidation reduction	other metabolic processes	P	Probable glycerol-3-phosphate dehydrogenase 2 (EC 1.1.1.8)
ruditapes_c25968	carbohydrate metabolic process	other metabolic processes	P	Probable glycerol-3-phosphate dehydrogenase 2 (EC 1.1.1.8)
ruditapes_c25968	glycerol-3-phosphate metabolic process	other metabolic processes	P	Probable glycerol-3-phosphate dehydrogenase 2 (EC 1.1.1.8)
ruditapes_c25968	glycerol-3-phosphate catabolic process	other metabolic processes	P	Probable glycerol-3-phosphate dehydrogenase 2 (EC 1.1.1.8)
ruditapes_c15774	proteolysis	protein metabolism	P	Putative serine protease K12H4.7 (EC 3.4.-.-)
ruditapes_c15774	biological_process	other biological processes	P	Putative serine protease K12H4.7 (EC 3.4.-.-)
ruditapes_c20913	histone H3-K9 methylation	protein metabolism	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c20913	histone H3-K9 methylation	cell organization and biogenesis	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c20913	histone lysine methylation	protein metabolism	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c20913	histone lysine methylation	cell organization and biogenesis	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c20913	methylation	other metabolic processes	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c20913	histone H3-K36 methylation	protein metabolism	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c20913	histone H3-K36 methylation	cell organization and biogenesis	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c20913	negative regulation of vulval development	developmental processes	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c20913	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c20913	hermaphrodite genitalia development	developmental processes	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c20913	gamete generation	other biological processes	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c20913	reproduction	other biological processes	P	Probable histone-lysine N-methyltransferase met-2 (EC 2.1.1.43)
ruditapes_c5049	embryonic development ending in birth or egg hatching	developmental processes	P	Protein cbp-1
ruditapes_c5049	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein cbp-1
ruditapes_c5049	apoptosis	death	P	Protein cbp-1
ruditapes_c5049	"molting cycle, collagen and cuticulin-based cuticle"	other biological processes	P	Protein cbp-1
ruditapes_c5049	inductive cell migration	other biological processes	P	Protein cbp-1
ruditapes_c2905	histone acetylation	cell organization and biogenesis	P	Protein cbp-1
ruditapes_c2905	spermatogenesis	other biological processes	P	Protein cbp-1
ruditapes_c2905	oogenesis	other biological processes	P	Protein cbp-1
ruditapes_c2905	apoptosis	death	P	Protein cbp-1
ruditapes_c2905	embryonic development	developmental processes	P	Protein cbp-1
ruditapes_c2905	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein cbp-1
ruditapes_c2905	histone acetylation	protein metabolism	P	Protein cbp-1
ruditapes_c2905	embryonic development ending in birth or egg hatching	developmental processes	P	Protein cbp-1
ruditapes_c2905	"molting cycle, collagen and cuticulin-based cuticle"	other biological processes	P	Protein cbp-1
ruditapes_c5049	determination of adult life span	developmental processes	P	Protein cbp-1
ruditapes_c5049	embryonic development	developmental processes	P	Protein cbp-1
ruditapes_c2905	lipid storage	other biological processes	P	Protein cbp-1
ruditapes_c2905	inductive cell migration	other biological processes	P	Protein cbp-1
ruditapes_c5049	reproduction	other biological processes	P	Protein cbp-1
ruditapes_c2905	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein cbp-1
ruditapes_c5049	spermatogenesis	other biological processes	P	Protein cbp-1
ruditapes_c5049	oogenesis	other biological processes	P	Protein cbp-1
ruditapes_c5049	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein cbp-1
ruditapes_c2905	determination of adult life span	developmental processes	P	Protein cbp-1
ruditapes_c5049	histone acetylation	protein metabolism	P	Protein cbp-1
ruditapes_c5049	histone acetylation	cell organization and biogenesis	P	Protein cbp-1
ruditapes_c5049	lipid storage	other biological processes	P	Protein cbp-1
ruditapes_c2905	reproduction	other biological processes	P	Protein cbp-1
ruditapes_c5989	positive regulation of growth rate	other biological processes	P	"Probable enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17)"
ruditapes_c5989	fatty acid metabolic process	other metabolic processes	P	"Probable enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17)"
ruditapes_c5989	growth	other biological processes	P	"Probable enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17)"
ruditapes_c5989	lipid metabolic process	other metabolic processes	P	"Probable enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17)"
ruditapes_c5989	metabolic process	other metabolic processes	P	"Probable enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17)"
ruditapes_c5989	nematode larval development	developmental processes	P	"Probable enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17)"
ruditapes_c10309	intracellular protein transport	transport	P	Probable clathrin heavy chain 1
ruditapes_lrc38748	receptor-mediated endocytosis	transport	P	Probable clathrin heavy chain 1
ruditapes_lrc38748	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable clathrin heavy chain 1
ruditapes_c10309	nematode larval development	developmental processes	P	Probable clathrin heavy chain 1
ruditapes_c10309	protein catabolic process	protein metabolism	P	Probable clathrin heavy chain 1
ruditapes_lrc38748	reproduction	other biological processes	P	Probable clathrin heavy chain 1
ruditapes_lrc38748	apoptosis	death	P	Probable clathrin heavy chain 1
ruditapes_lrc38748	protein catabolic process	protein metabolism	P	Probable clathrin heavy chain 1
ruditapes_lrc38748	determination of adult life span	developmental processes	P	Probable clathrin heavy chain 1
ruditapes_lrc38748	protein localization	other biological processes	P	Probable clathrin heavy chain 1
ruditapes_c10309	determination of adult life span	developmental processes	P	Probable clathrin heavy chain 1
ruditapes_lrc38748	embryonic development ending in birth or egg hatching	developmental processes	P	Probable clathrin heavy chain 1
ruditapes_c10309	reproduction	other biological processes	P	Probable clathrin heavy chain 1
ruditapes_c10309	receptor-mediated endocytosis	transport	P	Probable clathrin heavy chain 1
ruditapes_c10309	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable clathrin heavy chain 1
ruditapes_lrc38748	vesicle-mediated transport	transport	P	Probable clathrin heavy chain 1
ruditapes_c10309	embryonic development ending in birth or egg hatching	developmental processes	P	Probable clathrin heavy chain 1
ruditapes_lrc38748	nematode larval development	developmental processes	P	Probable clathrin heavy chain 1
ruditapes_lrc38748	intracellular protein transport	transport	P	Probable clathrin heavy chain 1
ruditapes_c10309	protein localization	other biological processes	P	Probable clathrin heavy chain 1
ruditapes_c10309	apoptosis	death	P	Probable clathrin heavy chain 1
ruditapes_c10309	vesicle-mediated transport	transport	P	Probable clathrin heavy chain 1
ruditapes_lrc36100	cell adhesion	cell adhesion	P	Transmembrane cell adhesion receptor mua-3 (Muscle attachment abnormal protein 3)
ruditapes_lrc36100	apoptosis	death	P	Transmembrane cell adhesion receptor mua-3 (Muscle attachment abnormal protein 3)
ruditapes_lrc36100	nematode larval development	developmental processes	P	Transmembrane cell adhesion receptor mua-3 (Muscle attachment abnormal protein 3)
ruditapes_lrc36100	locomotion	other biological processes	P	Transmembrane cell adhesion receptor mua-3 (Muscle attachment abnormal protein 3)
ruditapes_lrc36100	growth	other biological processes	P	Transmembrane cell adhesion receptor mua-3 (Muscle attachment abnormal protein 3)
ruditapes_lrc36100	reproduction	other biological processes	P	Transmembrane cell adhesion receptor mua-3 (Muscle attachment abnormal protein 3)
ruditapes_c9545	ion transport	transport	P	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)
ruditapes_c9545	transmembrane transport	transport	P	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)
ruditapes_c9545	transport	transport	P	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)
ruditapes2_lrc5080	ion transport	transport	P	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)
ruditapes2_lrc5080	transmembrane calcium ion transport	transport	P	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)
ruditapes_c9545	transmembrane ion transport	transport	P	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)
ruditapes2_lrc5080	transmembrane transport	transport	P	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)
ruditapes2_lrc5080	transmembrane ion transport	transport	P	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)
ruditapes_c9545	transmembrane calcium ion transport	transport	P	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)
ruditapes2_lrc5080	transport	transport	P	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)
ruditapes_lrc31532	RNA interference	other metabolic processes	P	B-box type zinc finger protein ncl-1
ruditapes_c17970	carbohydrate metabolic process	other metabolic processes	P	Probable mannose-6-phosphate isomerase (EC 5.3.1.8) (Phosphohexomutase) (Phosphomannose isomerase) (PMI)
ruditapes_c22809	locomotion	other biological processes	P	Uncharacterized protein ZK688.2
ruditapes_c22809	positive regulation of multicellular organism growth	other biological processes	P	Uncharacterized protein ZK688.2
ruditapes2_c4659	signal transduction	signal transduction	P	Uncharacterized protein ZK688.5
ruditapes_c29795	multicellular organismal development	developmental processes	P	Zinc finger protein sdc-3
ruditapes_c29795	morphogenesis of an epithelium	developmental processes	P	Zinc finger protein sdc-3
ruditapes_c29795	sex determination	other biological processes	P	Zinc finger protein sdc-3
ruditapes_c29795	mitotic sister chromatid segregation	cell cycle and proliferation	P	Zinc finger protein sdc-3
ruditapes_c29795	mitotic sister chromatid segregation	cell organization and biogenesis	P	Zinc finger protein sdc-3
ruditapes_c29795	body morphogenesis	other biological processes	P	Zinc finger protein sdc-3
ruditapes_c29795	dosage compensation complex assembly during dosage compensation by hypoactivation of X chromosome	other metabolic processes	P	Zinc finger protein sdc-3
ruditapes_c29795	dosage compensation complex assembly during dosage compensation by hypoactivation of X chromosome	cell organization and biogenesis	P	Zinc finger protein sdc-3
ruditapes2_c1075	positive regulation of angiogenesis	developmental processes	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes_c6059	positive regulation of endothelial cell differentiation	other biological processes	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes2_c1075	regulation of apoptosis	death	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes2_c3113	regulation of apoptosis	death	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes_c6059	regulation of apoptosis	death	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes2_c1075	positive regulation of endothelial cell differentiation	other biological processes	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes2_c1075	negative regulation of cell proliferation	cell cycle and proliferation	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes2_c1075	positive regulation of myoblast differentiation	developmental processes	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes_c6059	positive regulation of angiogenesis	developmental processes	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes2_c3113	positive regulation of angiogenesis	developmental processes	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes2_c3113	positive regulation of endothelial cell differentiation	other biological processes	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes2_c3113	negative regulation of cell proliferation	cell cycle and proliferation	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes_c6059	positive regulation of myoblast differentiation	developmental processes	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes_c6059	negative regulation of cell proliferation	cell cycle and proliferation	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes2_c3113	positive regulation of myoblast differentiation	developmental processes	P	Protein BTG1 (B-cell translocation gene 1 protein)
ruditapes_c25217	dephosphorylation	other metabolic processes	P	3-phytase A (EC 3.1.3.8) (3 phytase A) (Myo-inositol hexakisphosphate phosphohydrolase A) (Myo-inositol-hexaphosphate 3-phosphohydrolase A)
ruditapes_c5911	protein secretion	transport	P	Protein SCD5 (Protein FTB1)
ruditapes_c5911	cortical actin cytoskeleton organization	cell organization and biogenesis	P	Protein SCD5 (Protein FTB1)
ruditapes_c5911	endocytosis	transport	P	Protein SCD5 (Protein FTB1)
ruditapes_c5911	endocytosis	cell organization and biogenesis	P	Protein SCD5 (Protein FTB1)
ruditapes_c5911	protein transport	transport	P	Protein SCD5 (Protein FTB1)
ruditapes_c5911	actin filament organization	cell organization and biogenesis	P	Protein SCD5 (Protein FTB1)
ruditapes_c5911	transport	transport	P	Protein SCD5 (Protein FTB1)
ruditapes_c28011	N-terminal protein myristoylation	protein metabolism	P	Glycylpeptide N-tetradecanoyltransferase (EC 2.3.1.97) (Myristoyl-CoA:protein N-myristoyltransferase) (NMT) (Peptide N-myristoyltransferase)
ruditapes_c11856	translation	protein metabolism	P	"50S ribosomal protein L23, plastid"
ruditapes_c30268	translation	protein metabolism	P	40S ribosomal protein S18
ruditapes_c30268	translational initiation	protein metabolism	P	40S ribosomal protein S18
ruditapes_c23645	RNA interference	other metabolic processes	P	Protein dumpy-20
ruditapes_c23645	body morphogenesis	other biological processes	P	Protein dumpy-20
ruditapes_lrc38926	aromatic amino acid family biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_lrc38926	tryptophan metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_lrc38926	metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_lrc38926	tryptophan biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_lrc38926	cellular amino acid biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_s37651	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_s37651	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_c27785	DNA restriction-modification system	DNA metabolism	P	Type-2 restriction enzyme SsoII (R.SsoII) (EC 3.1.21.4) (Endonuclease SsoII) (Type II restriction enzyme SsoII)
ruditapes_c2371	L-serine metabolic process	other metabolic processes	P	"Serine hydroxymethyltransferase, cytosolic (SHMT) (EC 2.1.2.1) (Glycine hydroxymethyltransferase) (Serine methylase)"
ruditapes_c2371	glycine metabolic process	other metabolic processes	P	"Serine hydroxymethyltransferase, cytosolic (SHMT) (EC 2.1.2.1) (Glycine hydroxymethyltransferase) (Serine methylase)"
ruditapes_c2371	one-carbon compound metabolic process	other metabolic processes	P	"Serine hydroxymethyltransferase, cytosolic (SHMT) (EC 2.1.2.1) (Glycine hydroxymethyltransferase) (Serine methylase)"
ruditapes_c6227	cellular response to extracellular stimulus	other biological processes	P	Asialoglycoprotein receptor 1 (ASGP-R 1) (ASGPR 1) (Hepatic lectin 1) (HL-1) (mHL-1)
ruditapes_c6227	endocytosis	transport	P	Asialoglycoprotein receptor 1 (ASGP-R 1) (ASGPR 1) (Hepatic lectin 1) (HL-1) (mHL-1)
ruditapes_c6227	endocytosis	cell organization and biogenesis	P	Asialoglycoprotein receptor 1 (ASGP-R 1) (ASGPR 1) (Hepatic lectin 1) (HL-1) (mHL-1)
ruditapes_c21341	immune response	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	negative regulation of mast cell activation	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	G-protein coupled receptor protein signaling pathway	signal transduction	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	negative regulation of action potential	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	sensory perception of pain	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	signal transduction	signal transduction	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	response to amphetamine	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	inflammatory response	stress response	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	negative regulation of inflammatory response	stress response	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	response to lipopolysaccharide	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	behavior	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	negative regulation of nitric-oxide synthase activity	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	"negative regulation of synaptic transmission, GABAergic"	cell-cell signaling	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c21341	"G-protein signaling, coupled to cyclic nucleotide second messenger"	signal transduction	P	Cannabinoid receptor 2 (CB-2) (CB2) (hCB2) (CX5)
ruditapes_c27753	dopamine receptor signaling pathway	signal transduction	P	D(2) dopamine receptor B (D2R-B) (D2R 2) (Fragment)
ruditapes_c27753	signal transduction	signal transduction	P	D(2) dopamine receptor B (D2R-B) (D2R 2) (Fragment)
ruditapes_c27753	G-protein coupled receptor protein signaling pathway	signal transduction	P	D(2) dopamine receptor B (D2R-B) (D2R 2) (Fragment)
ruditapes_s33419	proteolysis	protein metabolism	P	Chymotrypsin-like serine proteinase (EC 3.4.21.-)
ruditapes_lrc34391	proteolysis	protein metabolism	P	Chymotrypsin-like serine proteinase (EC 3.4.21.-)
ruditapes_s38165	proteolysis	protein metabolism	P	Chymotrypsin-like serine proteinase (EC 3.4.21.-)
ruditapes_c7578	digestion	other biological processes	P	Trypsin-2 (EC 3.4.21.4) (Trypsin II) (Fragment)
ruditapes_c7578	proteolysis	protein metabolism	P	Trypsin-2 (EC 3.4.21.4) (Trypsin II) (Fragment)
ruditapes_lrc22012	digestion	other biological processes	P	Trypsin-1 (EC 3.4.21.4) (Antryp1)
ruditapes_lrc22012	proteolysis	protein metabolism	P	Trypsin-1 (EC 3.4.21.4) (Antryp1)
ruditapes_c21054	proteolysis	protein metabolism	P	Trypsin-4 (EC 3.4.21.4)
ruditapes_c21054	digestion	other biological processes	P	Trypsin-4 (EC 3.4.21.4)
ruditapes_lrc35601	proteolysis	protein metabolism	P	Trypsin CFT-1 (EC 3.4.21.4)
ruditapes_lrc8617	"transposition, DNA-mediated"	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c12001	DNA integration	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c18442	DNA integration	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c11039	DNA recombination	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c18442	DNA recombination	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_lrc8617	DNA recombination	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c11039	"transposition, DNA-mediated"	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c8184	DNA integration	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c11039	DNA integration	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c8184	"transposition, DNA-mediated"	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c12001	"transposition, DNA-mediated"	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c18442	"transposition, DNA-mediated"	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_lrc8617	DNA integration	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c8184	DNA recombination	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_c12001	DNA recombination	DNA metabolism	P	Transposable element Tcb1 transposase (Transposable element Barney transposase)
ruditapes_lrc37795	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 20 (U3 snoRNA-associated protein 20) (U three protein 20)
ruditapes_lrc37795	"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 20 (U3 snoRNA-associated protein 20) (U three protein 20)
ruditapes_lrc37795	"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 20 (U3 snoRNA-associated protein 20) (U three protein 20)
ruditapes_lrc37795	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 20 (U3 snoRNA-associated protein 20) (U three protein 20)
ruditapes_lrc37795	"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 20 (U3 snoRNA-associated protein 20) (U three protein 20)
ruditapes_c845	cellular response to cold	stress response	P	Protein SPT23
ruditapes_c845	unsaturated fatty acid biosynthetic process	other metabolic processes	P	Protein SPT23
ruditapes_c845	chromatin silencing at silent mating-type cassette	RNA metabolism	P	Protein SPT23
ruditapes_c845	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein SPT23
ruditapes2_c2421	innate immune response	stress response	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes2_c2421	alveolus development	developmental processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes2_c2421	positive regulation of phagocytosis	transport	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes2_c2421	positive regulation of phagocytosis	cell organization and biogenesis	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes2_c2421	negative regulation of T cell proliferation	cell cycle and proliferation	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes2_c2421	macrophage chemotaxis	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes2_c2421	surfactant homeostasis	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes2_c2421	negative regulation of interleukin-2 biosynthetic process	other metabolic processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes2_c2421	respiratory gaseous exchange	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes2_c2421	receptor-mediated endocytosis	transport	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes2_c2421	receptor-mediated endocytosis	cell organization and biogenesis	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes2_c2421	regulation of cytokine production	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)
ruditapes_c23125	response to glucocorticoid stimulus	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	negative regulation of T cell proliferation	cell cycle and proliferation	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	negative regulation of phagocytosis	transport	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	negative regulation of phagocytosis	cell organization and biogenesis	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	negative regulation of interleukin-2 production	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	regulation of liquid surface tension	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	response to hyperoxia	stress response	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	alveolus development	developmental processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	surfactant homeostasis	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	positive regulation of phagocytosis	transport	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	positive regulation of phagocytosis	cell organization and biogenesis	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	response to corticosteroid stimulus	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	respiratory gaseous exchange	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	opsonization	transport	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c23125	opsonization	cell organization and biogenesis	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (CP4) (Lung surfactant protein D)
ruditapes_c29741	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-20
ruditapes_c29741	protein transport	transport	P	Ras-related protein Rab-20
ruditapes_c29741	transport	transport	P	Ras-related protein Rab-20
ruditapes_c21314	transport	transport	P	Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type (EC 3.6.3.8) (Calcium pump)
ruditapes_c21314	ion transport	transport	P	Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type (EC 3.6.3.8) (Calcium pump)
ruditapes_c21314	cation transport	transport	P	Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type (EC 3.6.3.8) (Calcium pump)
ruditapes_c21314	ATP biosynthetic process	other metabolic processes	P	Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type (EC 3.6.3.8) (Calcium pump)
ruditapes_c21314	metabolic process	other metabolic processes	P	Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type (EC 3.6.3.8) (Calcium pump)
ruditapes_c21314	calcium ion transport	transport	P	Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type (EC 3.6.3.8) (Calcium pump)
ruditapes_lrc26837	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes_lrc26837	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes_lrc26837	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes_lrc26837	growth	other biological processes	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes_lrc26837	proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes_lrc26837	ion transport	transport	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes_lrc26837	spermatid development	other biological processes	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes_lrc26837	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes_lrc26837	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes_lrc26837	transport	transport	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes_lrc26837	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes_lrc26837	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial (Protein bellwether)"
ruditapes2_c6971	phosphoinositide-mediated signaling	signal transduction	P	Protein CRAC
ruditapes2_c6971	"G-protein signaling, coupled to cAMP nucleotide second messenger"	signal transduction	P	Protein CRAC
ruditapes2_c6971	positive regulation of adenylate cyclase activity	other metabolic processes	P	Protein CRAC
ruditapes2_c6971	chemotaxis	other biological processes	P	Protein CRAC
ruditapes2_c6971	sorocarp development	stress response	P	Protein CRAC
ruditapes2_c6971	sorocarp development	developmental processes	P	Protein CRAC
ruditapes2_c6971	aggregation involved in sorocarp development	stress response	P	Protein CRAC
ruditapes2_c6971	aggregation involved in sorocarp development	developmental processes	P	Protein CRAC
ruditapes2_c6971	regulation of actin polymerization or depolymerization	protein metabolism	P	Protein CRAC
ruditapes2_c6971	regulation of actin polymerization or depolymerization	cell organization and biogenesis	P	Protein CRAC
ruditapes2_c6971	multicellular organismal development	developmental processes	P	Protein CRAC
ruditapes2_c6971	sporulation resulting in formation of a cellular spore	other biological processes	P	Protein CRAC
ruditapes_c6419	protein oligomerization	cell organization and biogenesis	P	Caveolin-1
ruditapes_lrc33342	nitric oxide homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32159	protein oligomerization	cell organization and biogenesis	P	Caveolin-1
ruditapes_lrc32159	positive regulation of peptidase activity	other biological processes	P	Caveolin-1
ruditapes_c6419	protein localization	other biological processes	P	Caveolin-1
ruditapes_lrc32159	negative regulation of protein binding	other biological processes	P	Caveolin-1
ruditapes_lrc33342	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Caveolin-1
ruditapes_lrc32159	negative regulation of JAK-STAT cascade	signal transduction	P	Caveolin-1
ruditapes_lrc32954	positive regulation of calcium ion transport into cytosol	transport	P	Caveolin-1
ruditapes_lrc32159	protein localization	other biological processes	P	Caveolin-1
ruditapes_c6419	positive regulation of calcium ion transport into cytosol	transport	P	Caveolin-1
ruditapes_c6419	cholesterol homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc33342	response to calcium ion	other biological processes	P	Caveolin-1
ruditapes_lrc33342	lipid storage	other biological processes	P	Caveolin-1
ruditapes_lrc33342	negative regulation of MAP kinase activity	other metabolic processes	P	Caveolin-1
ruditapes_lrc32954	cytosolic calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc33342	protein oligomerization	cell organization and biogenesis	P	Caveolin-1
ruditapes_lrc32954	lipid storage	other biological processes	P	Caveolin-1
ruditapes_c6419	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	Caveolin-1
ruditapes_c6419	negative regulation of MAPKKK cascade	signal transduction	P	Caveolin-1
ruditapes_lrc32159	cytosolic calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32954	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Caveolin-1
ruditapes_lrc32159	regulation of peptidase activity	other biological processes	P	Caveolin-1
ruditapes_c6419	calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_c6419	regulation of peptidase activity	other biological processes	P	Caveolin-1
ruditapes_lrc32159	skeletal muscle tissue development	developmental processes	P	Caveolin-1
ruditapes_c6419	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Caveolin-1
ruditapes_lrc32954	mammary gland development	developmental processes	P	Caveolin-1
ruditapes_lrc32159	cholesterol homeostasis	other biological processes	P	Caveolin-1
ruditapes_c6419	response to hypoxia	stress response	P	Caveolin-1
ruditapes_lrc32954	protein localization	other biological processes	P	Caveolin-1
ruditapes_lrc33342	negative regulation of JAK-STAT cascade	signal transduction	P	Caveolin-1
ruditapes_lrc32159	cellular calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_c6419	mammary gland development	developmental processes	P	Caveolin-1
ruditapes_c6419	membrane depolarization	other biological processes	P	Caveolin-1
ruditapes_lrc32954	nitric oxide homeostasis	other biological processes	P	Caveolin-1
ruditapes_c6419	negative regulation of epithelial cell differentiation	developmental processes	P	Caveolin-1
ruditapes_lrc32954	negative regulation of nitric oxide biosynthetic process	other metabolic processes	P	Caveolin-1
ruditapes_c6419	mammary gland involution	developmental processes	P	Caveolin-1
ruditapes_lrc32159	negative regulation of MAP kinase activity	other metabolic processes	P	Caveolin-1
ruditapes_c6419	positive regulation of metalloenzyme activity	other biological processes	P	Caveolin-1
ruditapes_lrc32159	calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32159	response to hypoxia	stress response	P	Caveolin-1
ruditapes_lrc32954	regulation of smooth muscle contraction	other biological processes	P	Caveolin-1
ruditapes_c6419	negative regulation of cytokine-mediated signaling pathway	signal transduction	P	Caveolin-1
ruditapes_c6419	negative regulation of signal transduction	signal transduction	P	Caveolin-1
ruditapes_c6419	negative regulation of protein binding	other biological processes	P	Caveolin-1
ruditapes_c6419	vasculogenesis	developmental processes	P	Caveolin-1
ruditapes_lrc32954	vasculogenesis	developmental processes	P	Caveolin-1
ruditapes_lrc32954	negative regulation of tyrosine phosphorylation of Stat5 protein	signal transduction	P	Caveolin-1
ruditapes_lrc32954	negative regulation of tyrosine phosphorylation of Stat5 protein	protein metabolism	P	Caveolin-1
ruditapes_lrc33342	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc33342	regulation of blood coagulation	stress response	P	Caveolin-1
ruditapes_lrc32954	regulation of blood coagulation	stress response	P	Caveolin-1
ruditapes_lrc32159	vesicle organization	cell organization and biogenesis	P	Caveolin-1
ruditapes_lrc32954	response to progesterone stimulus	other biological processes	P	Caveolin-1
ruditapes_lrc32159	negative regulation of MAPKKK cascade	signal transduction	P	Caveolin-1
ruditapes_c6419	negative regulation of BMP signaling pathway	signal transduction	P	Caveolin-1
ruditapes_c6419	response to progesterone stimulus	other biological processes	P	Caveolin-1
ruditapes_c6419	positive regulation of vasoconstriction	other biological processes	P	Caveolin-1
ruditapes_c6419	regulation of blood coagulation	stress response	P	Caveolin-1
ruditapes_lrc32954	skeletal muscle tissue development	developmental processes	P	Caveolin-1
ruditapes_lrc32954	response to estrogen stimulus	other biological processes	P	Caveolin-1
ruditapes_lrc33342	skeletal muscle tissue development	developmental processes	P	Caveolin-1
ruditapes_lrc32159	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	Caveolin-1
ruditapes_lrc32159	negative regulation of BMP signaling pathway	signal transduction	P	Caveolin-1
ruditapes_lrc32159	inactivation of MAPK activity	signal transduction	P	Caveolin-1
ruditapes_lrc32159	inactivation of MAPK activity	other metabolic processes	P	Caveolin-1
ruditapes_lrc33342	cytosolic calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32954	regulation of peptidase activity	other biological processes	P	Caveolin-1
ruditapes_lrc32954	negative regulation of cell proliferation	cell cycle and proliferation	P	Caveolin-1
ruditapes_lrc32159	negative regulation of epithelial cell differentiation	developmental processes	P	Caveolin-1
ruditapes_lrc32954	calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32159	membrane depolarization	other biological processes	P	Caveolin-1
ruditapes_lrc32159	regulation of blood coagulation	stress response	P	Caveolin-1
ruditapes_lrc32954	membrane depolarization	other biological processes	P	Caveolin-1
ruditapes_c6419	negative regulation of nitric oxide biosynthetic process	other metabolic processes	P	Caveolin-1
ruditapes_lrc33342	MAPKKK cascade	signal transduction	P	Caveolin-1
ruditapes_lrc32159	MAPKKK cascade	signal transduction	P	Caveolin-1
ruditapes_c6419	negative regulation of cell proliferation	cell cycle and proliferation	P	Caveolin-1
ruditapes_lrc33342	regulation of peptidase activity	other biological processes	P	Caveolin-1
ruditapes_lrc32954	negative regulation of BMP signaling pathway	signal transduction	P	Caveolin-1
ruditapes_c6419	negative regulation of tyrosine phosphorylation of Stat5 protein	signal transduction	P	Caveolin-1
ruditapes_c6419	negative regulation of tyrosine phosphorylation of Stat5 protein	protein metabolism	P	Caveolin-1
ruditapes_c6419	nitric oxide homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32954	negative regulation of epithelial cell differentiation	developmental processes	P	Caveolin-1
ruditapes_lrc33342	negative regulation of BMP signaling pathway	signal transduction	P	Caveolin-1
ruditapes_lrc33342	inactivation of MAPK activity	signal transduction	P	Caveolin-1
ruditapes_lrc33342	inactivation of MAPK activity	other metabolic processes	P	Caveolin-1
ruditapes_lrc32954	cellular calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32954	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	Caveolin-1
ruditapes_lrc32954	cholesterol homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32159	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Caveolin-1
ruditapes_lrc33342	vesicle organization	cell organization and biogenesis	P	Caveolin-1
ruditapes_lrc33342	membrane depolarization	other biological processes	P	Caveolin-1
ruditapes_c6419	response to estrogen stimulus	other biological processes	P	Caveolin-1
ruditapes_c6419	regulation of smooth muscle contraction	other biological processes	P	Caveolin-1
ruditapes_c6419	cellular calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc33342	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	Caveolin-1
ruditapes_lrc32159	lipid storage	other biological processes	P	Caveolin-1
ruditapes_lrc33342	protein localization	other biological processes	P	Caveolin-1
ruditapes_lrc33342	response to hypoxia	stress response	P	Caveolin-1
ruditapes_lrc32954	negative regulation of MAPKKK cascade	signal transduction	P	Caveolin-1
ruditapes_lrc32159	positive regulation of calcium ion transport into cytosol	transport	P	Caveolin-1
ruditapes_lrc32954	calcium ion transport	transport	P	Caveolin-1
ruditapes_c6419	calcium ion transport	transport	P	Caveolin-1
ruditapes_c6419	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc32159	cellular response to starvation	stress response	P	Caveolin-1
ruditapes_lrc33342	negative regulation of epithelial cell differentiation	developmental processes	P	Caveolin-1
ruditapes_lrc32954	response to hypoxia	stress response	P	Caveolin-1
ruditapes_c6419	positive regulation of peptidase activity	other biological processes	P	Caveolin-1
ruditapes_lrc32159	vasoconstriction	other biological processes	P	Caveolin-1
ruditapes_lrc33342	negative regulation of tyrosine phosphorylation of Stat5 protein	signal transduction	P	Caveolin-1
ruditapes_lrc33342	negative regulation of tyrosine phosphorylation of Stat5 protein	protein metabolism	P	Caveolin-1
ruditapes_lrc32159	triglyceride metabolic process	other metabolic processes	P	Caveolin-1
ruditapes_lrc32954	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc33342	vasoconstriction	other biological processes	P	Caveolin-1
ruditapes_lrc33342	cellular response to starvation	stress response	P	Caveolin-1
ruditapes_lrc32954	protein homooligomerization	cell organization and biogenesis	P	Caveolin-1
ruditapes_lrc32954	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caveolin-1
ruditapes_lrc33342	mammary gland involution	developmental processes	P	Caveolin-1
ruditapes_lrc32159	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caveolin-1
ruditapes_lrc33342	response to estrogen stimulus	other biological processes	P	Caveolin-1
ruditapes_lrc33342	positive regulation of vasoconstriction	other biological processes	P	Caveolin-1
ruditapes_lrc33342	negative regulation of protein binding	other biological processes	P	Caveolin-1
ruditapes_lrc33342	positive regulation of calcium ion transport into cytosol	transport	P	Caveolin-1
ruditapes_lrc33342	triglyceride metabolic process	other metabolic processes	P	Caveolin-1
ruditapes_lrc32954	vasoconstriction	other biological processes	P	Caveolin-1
ruditapes_lrc32954	negative regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caveolin-1
ruditapes_lrc32159	negative regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caveolin-1
ruditapes_c6419	regulation of fatty acid metabolic process	other metabolic processes	P	Caveolin-1
ruditapes_lrc33342	negative regulation of signal transduction	signal transduction	P	Caveolin-1
ruditapes_lrc33342	negative regulation of cell proliferation	cell cycle and proliferation	P	Caveolin-1
ruditapes_lrc32954	regulation of fatty acid metabolic process	other metabolic processes	P	Caveolin-1
ruditapes_lrc32159	mammary gland development	developmental processes	P	Caveolin-1
ruditapes_lrc32159	response to estrogen stimulus	other biological processes	P	Caveolin-1
ruditapes_lrc33342	negative regulation of MAPKKK cascade	signal transduction	P	Caveolin-1
ruditapes_lrc32954	mammary gland involution	developmental processes	P	Caveolin-1
ruditapes_lrc32954	negative regulation of signal transduction	signal transduction	P	Caveolin-1
ruditapes_lrc33342	mammary gland development	developmental processes	P	Caveolin-1
ruditapes_c6419	lactation	developmental processes	P	Caveolin-1
ruditapes_c6419	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caveolin-1
ruditapes_lrc33342	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caveolin-1
ruditapes_lrc32954	negative regulation of protein binding	other biological processes	P	Caveolin-1
ruditapes_c6419	negative regulation of JAK-STAT cascade	signal transduction	P	Caveolin-1
ruditapes_lrc32954	negative regulation of JAK-STAT cascade	signal transduction	P	Caveolin-1
ruditapes_lrc32159	regulation of fatty acid metabolic process	other metabolic processes	P	Caveolin-1
ruditapes_lrc32159	negative regulation of tyrosine phosphorylation of Stat5 protein	protein metabolism	P	Caveolin-1
ruditapes_c6419	cellular response to starvation	stress response	P	Caveolin-1
ruditapes_c6419	vasoconstriction	other biological processes	P	Caveolin-1
ruditapes_lrc33342	regulation of fatty acid metabolic process	other metabolic processes	P	Caveolin-1
ruditapes_c6419	cytosolic calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32159	positive regulation of metalloenzyme activity	other biological processes	P	Caveolin-1
ruditapes_c6419	negative regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caveolin-1
ruditapes_lrc32159	calcium ion transport	transport	P	Caveolin-1
ruditapes_lrc32954	positive regulation of vasoconstriction	other biological processes	P	Caveolin-1
ruditapes_lrc32954	cellular response to starvation	stress response	P	Caveolin-1
ruditapes_lrc32159	negative regulation of tyrosine phosphorylation of Stat5 protein	signal transduction	P	Caveolin-1
ruditapes_lrc32159	negative regulation of cytokine-mediated signaling pathway	signal transduction	P	Caveolin-1
ruditapes_lrc33342	calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32159	negative regulation of cell proliferation	cell cycle and proliferation	P	Caveolin-1
ruditapes_lrc33342	negative regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caveolin-1
ruditapes_lrc32954	positive regulation of metalloenzyme activity	other biological processes	P	Caveolin-1
ruditapes_c6419	triglyceride metabolic process	other metabolic processes	P	Caveolin-1
ruditapes_lrc32954	triglyceride metabolic process	other metabolic processes	P	Caveolin-1
ruditapes_lrc33342	calcium ion transport	transport	P	Caveolin-1
ruditapes_lrc33342	cholesterol homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32954	response to calcium ion	other biological processes	P	Caveolin-1
ruditapes_lrc32954	inactivation of MAPK activity	signal transduction	P	Caveolin-1
ruditapes_lrc32954	inactivation of MAPK activity	other metabolic processes	P	Caveolin-1
ruditapes_lrc32954	MAPKKK cascade	signal transduction	P	Caveolin-1
ruditapes_lrc32954	negative regulation of cytokine-mediated signaling pathway	signal transduction	P	Caveolin-1
ruditapes_lrc32954	negative regulation of MAP kinase activity	other metabolic processes	P	Caveolin-1
ruditapes_lrc32954	protein oligomerization	cell organization and biogenesis	P	Caveolin-1
ruditapes_c6419	inactivation of MAPK activity	signal transduction	P	Caveolin-1
ruditapes_c6419	inactivation of MAPK activity	other metabolic processes	P	Caveolin-1
ruditapes_c6419	protein homooligomerization	cell organization and biogenesis	P	Caveolin-1
ruditapes_lrc32159	response to progesterone stimulus	other biological processes	P	Caveolin-1
ruditapes_lrc32159	lactation	developmental processes	P	Caveolin-1
ruditapes_lrc33342	cellular calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc33342	protein homooligomerization	cell organization and biogenesis	P	Caveolin-1
ruditapes_c6419	skeletal muscle tissue development	developmental processes	P	Caveolin-1
ruditapes_lrc32159	negative regulation of nitric oxide biosynthetic process	other metabolic processes	P	Caveolin-1
ruditapes_lrc33342	negative regulation of cytokine-mediated signaling pathway	signal transduction	P	Caveolin-1
ruditapes_lrc33342	positive regulation of metalloenzyme activity	other biological processes	P	Caveolin-1
ruditapes_c6419	lipid storage	other biological processes	P	Caveolin-1
ruditapes_lrc32954	vesicle organization	cell organization and biogenesis	P	Caveolin-1
ruditapes_lrc32159	regulation of smooth muscle contraction	other biological processes	P	Caveolin-1
ruditapes_lrc32159	nitric oxide homeostasis	other biological processes	P	Caveolin-1
ruditapes_lrc32159	protein homooligomerization	cell organization and biogenesis	P	Caveolin-1
ruditapes_lrc32159	vasculogenesis	developmental processes	P	Caveolin-1
ruditapes_c6419	MAPKKK cascade	signal transduction	P	Caveolin-1
ruditapes_lrc33342	negative regulation of nitric oxide biosynthetic process	other metabolic processes	P	Caveolin-1
ruditapes_lrc32954	lactation	developmental processes	P	Caveolin-1
ruditapes_c6419	response to calcium ion	other biological processes	P	Caveolin-1
ruditapes_lrc33342	vasculogenesis	developmental processes	P	Caveolin-1
ruditapes_lrc32954	positive regulation of peptidase activity	other biological processes	P	Caveolin-1
ruditapes_c6419	vesicle organization	cell organization and biogenesis	P	Caveolin-1
ruditapes_c6419	negative regulation of MAP kinase activity	other metabolic processes	P	Caveolin-1
ruditapes_lrc32159	mammary gland involution	developmental processes	P	Caveolin-1
ruditapes_lrc33342	regulation of smooth muscle contraction	other biological processes	P	Caveolin-1
ruditapes_lrc33342	response to progesterone stimulus	other biological processes	P	Caveolin-1
ruditapes_lrc33342	positive regulation of peptidase activity	other biological processes	P	Caveolin-1
ruditapes_lrc33342	lactation	developmental processes	P	Caveolin-1
ruditapes_lrc32159	positive regulation of vasoconstriction	other biological processes	P	Caveolin-1
ruditapes_lrc32159	response to calcium ion	other biological processes	P	Caveolin-1
ruditapes_lrc32159	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc32159	negative regulation of signal transduction	signal transduction	P	Caveolin-1
ruditapes2_c1564	ion transport	transport	P	"ATP synthase subunit delta, mitochondrial (F-ATPase delta subunit)"
ruditapes2_c1564	ADP biosynthetic process	other metabolic processes	P	"ATP synthase subunit delta, mitochondrial (F-ATPase delta subunit)"
ruditapes2_c1564	proton transport	transport	P	"ATP synthase subunit delta, mitochondrial (F-ATPase delta subunit)"
ruditapes2_c1564	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit delta, mitochondrial (F-ATPase delta subunit)"
ruditapes2_c1564	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit delta, mitochondrial (F-ATPase delta subunit)"
ruditapes2_c1564	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit delta, mitochondrial (F-ATPase delta subunit)"
ruditapes2_c1564	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit delta, mitochondrial (F-ATPase delta subunit)"
ruditapes2_c1564	transport	transport	P	"ATP synthase subunit delta, mitochondrial (F-ATPase delta subunit)"
ruditapes2_c1564	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit delta, mitochondrial (F-ATPase delta subunit)"
ruditapes2_c2366	transport	transport	P	Sodium channel protein para (Protein paralytic) (Sodium channel 1) (DmNav1)
ruditapes2_c2366	response to pyrethroid	other biological processes	P	Sodium channel protein para (Protein paralytic) (Sodium channel 1) (DmNav1)
ruditapes2_c2366	"male courtship behavior, veined wing generated song production"	other biological processes	P	Sodium channel protein para (Protein paralytic) (Sodium channel 1) (DmNav1)
ruditapes2_c2366	response to DDT	other biological processes	P	Sodium channel protein para (Protein paralytic) (Sodium channel 1) (DmNav1)
ruditapes2_c2366	regulation of transmembrane ion transport	transport	P	Sodium channel protein para (Protein paralytic) (Sodium channel 1) (DmNav1)
ruditapes2_c2366	transmembrane transport	transport	P	Sodium channel protein para (Protein paralytic) (Sodium channel 1) (DmNav1)
ruditapes2_c2366	ion transport	transport	P	Sodium channel protein para (Protein paralytic) (Sodium channel 1) (DmNav1)
ruditapes2_c2366	sodium ion transport	transport	P	Sodium channel protein para (Protein paralytic) (Sodium channel 1) (DmNav1)
ruditapes_c10727	chloride transport	transport	P	Chloride intracellular channel protein 5 (Chlorine channel protein p64)
ruditapes_c10727	transport	transport	P	Chloride intracellular channel protein 5 (Chlorine channel protein p64)
ruditapes_c10727	regulation of transmembrane ion transport	transport	P	Chloride intracellular channel protein 5 (Chlorine channel protein p64)
ruditapes_c10727	ion transport	transport	P	Chloride intracellular channel protein 5 (Chlorine channel protein p64)
ruditapes_c20671	acute-phase response	stress response	P	Serum amyloid A-3 protein
ruditapes2_c5708	in utero embryonic development	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	"substrate-bound cell migration, cell extension"	cell organization and biogenesis	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	ventricular cardiac muscle cell development	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	cardiac myofibril assembly	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	cardiac myofibril assembly	cell organization and biogenesis	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	cell proliferation	cell cycle and proliferation	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	neuron projection development	cell organization and biogenesis	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	actin cytoskeleton organization	cell organization and biogenesis	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	neuromuscular process controlling balance	other biological processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	neuron projection development	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	plasma membrane repair	cell organization and biogenesis	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	exocytosis	transport	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	nuclear migration	other biological processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	myofibril assembly	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	myofibril assembly	cell organization and biogenesis	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	brain development	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	plasma membrane repair	stress response	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	adult heart development	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	retina development in camera-type eye	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	third ventricle development	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	actin filament-based movement	transport	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	cerebellar Purkinje cell layer development	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	neuron migration	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	lateral ventricle development	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	axonogenesis	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	axonogenesis	cell organization and biogenesis	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	cytokinesis after mitosis	cell cycle and proliferation	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	fourth ventricle development	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	regulation of cell shape	cell organization and biogenesis	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	axon guidance	developmental processes	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes2_c5708	axon guidance	cell organization and biogenesis	P	"Myosin-10 (Cellular myosin heavy chain, type B) (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain B) (NMMHC-B) (Non-muscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)"
ruditapes_c20196	transport	transport	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c20196	vesicle-mediated transport	transport	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c20196	intracellular protein transport	transport	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c20196	protein transport	transport	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_lrc35589	body morphogenesis	other biological processes	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes_lrc35589	nematode larval development	developmental processes	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes_lrc35589	locomotion	other biological processes	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes_lrc35589	receptor-mediated endocytosis	transport	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes_lrc35589	transport	transport	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes_lrc35589	embryonic development ending in birth or egg hatching	developmental processes	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes_lrc35589	growth	other biological processes	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes_lrc35589	receptor-mediated endocytosis	cell organization and biogenesis	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes_lrc35589	intracellular protein transport	transport	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes_lrc35589	"molting cycle, collagen and cuticulin-based cuticle"	other biological processes	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes_lrc35589	positive regulation of growth rate	other biological processes	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes_lrc35589	vesicle-mediated transport	transport	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein) (Protein dumpy-23)
ruditapes2_c2075	intra-Golgi vesicle-mediated transport	transport	P	Coatomer subunit zeta-1 (Zeta-1-coat protein) (Zeta-1 COP)
ruditapes2_c2075	intracellular protein transport	transport	P	Coatomer subunit zeta-1 (Zeta-1-coat protein) (Zeta-1 COP)
ruditapes2_c2075	vesicle-mediated transport	transport	P	Coatomer subunit zeta-1 (Zeta-1-coat protein) (Zeta-1 COP)
ruditapes2_c2075	protein transport	transport	P	Coatomer subunit zeta-1 (Zeta-1-coat protein) (Zeta-1 COP)
ruditapes2_c2075	transport	transport	P	Coatomer subunit zeta-1 (Zeta-1-coat protein) (Zeta-1 COP)
ruditapes2_c2075	"retrograde vesicle-mediated transport, Golgi to ER"	transport	P	Coatomer subunit zeta-1 (Zeta-1-coat protein) (Zeta-1 COP)
ruditapes_c18070	response to cAMP	other biological processes	P	Basigin (5F7) (Collagenase stimulatory factor) (Extracellular matrix metalloproteinase inducer) (EMMPRIN) (Leukocyte activation antigen M6) (OK blood group antigen) (Tumor cell-derived collagenase stimulatory factor) (TCSF) (CD antigen CD147)
ruditapes_c18070	response to peptide hormone stimulus	other biological processes	P	Basigin (5F7) (Collagenase stimulatory factor) (Extracellular matrix metalloproteinase inducer) (EMMPRIN) (Leukocyte activation antigen M6) (OK blood group antigen) (Tumor cell-derived collagenase stimulatory factor) (TCSF) (CD antigen CD147)
ruditapes_c18070	embryo implantation	developmental processes	P	Basigin (5F7) (Collagenase stimulatory factor) (Extracellular matrix metalloproteinase inducer) (EMMPRIN) (Leukocyte activation antigen M6) (OK blood group antigen) (Tumor cell-derived collagenase stimulatory factor) (TCSF) (CD antigen CD147)
ruditapes_c18070	odontogenesis of dentine-containing tooth	developmental processes	P	Basigin (5F7) (Collagenase stimulatory factor) (Extracellular matrix metalloproteinase inducer) (EMMPRIN) (Leukocyte activation antigen M6) (OK blood group antigen) (Tumor cell-derived collagenase stimulatory factor) (TCSF) (CD antigen CD147)
ruditapes_c18070	response to mercury ion	other biological processes	P	Basigin (5F7) (Collagenase stimulatory factor) (Extracellular matrix metalloproteinase inducer) (EMMPRIN) (Leukocyte activation antigen M6) (OK blood group antigen) (Tumor cell-derived collagenase stimulatory factor) (TCSF) (CD antigen CD147)
ruditapes_c18070	decidualization	developmental processes	P	Basigin (5F7) (Collagenase stimulatory factor) (Extracellular matrix metalloproteinase inducer) (EMMPRIN) (Leukocyte activation antigen M6) (OK blood group antigen) (Tumor cell-derived collagenase stimulatory factor) (TCSF) (CD antigen CD147)
ruditapes_c18070	blood coagulation	stress response	P	Basigin (5F7) (Collagenase stimulatory factor) (Extracellular matrix metalloproteinase inducer) (EMMPRIN) (Leukocyte activation antigen M6) (OK blood group antigen) (Tumor cell-derived collagenase stimulatory factor) (TCSF) (CD antigen CD147)
ruditapes_c18070	cell surface receptor linked signal transduction	signal transduction	P	Basigin (5F7) (Collagenase stimulatory factor) (Extracellular matrix metalloproteinase inducer) (EMMPRIN) (Leukocyte activation antigen M6) (OK blood group antigen) (Tumor cell-derived collagenase stimulatory factor) (TCSF) (CD antigen CD147)
ruditapes_c18070	leukocyte migration	other biological processes	P	Basigin (5F7) (Collagenase stimulatory factor) (Extracellular matrix metalloproteinase inducer) (EMMPRIN) (Leukocyte activation antigen M6) (OK blood group antigen) (Tumor cell-derived collagenase stimulatory factor) (TCSF) (CD antigen CD147)
ruditapes_c18070	pyruvate metabolic process	other metabolic processes	P	Basigin (5F7) (Collagenase stimulatory factor) (Extracellular matrix metalloproteinase inducer) (EMMPRIN) (Leukocyte activation antigen M6) (OK blood group antigen) (Tumor cell-derived collagenase stimulatory factor) (TCSF) (CD antigen CD147)
ruditapes_c6236	translation	protein metabolism	P	Eukaryotic peptide chain release factor subunit 1-3 (Eukaryotic release factor 1-3) (eRF1-3) (Omnipotent suppressor protein 1 homolog 3) (SUP1 homolog 3)
ruditapes_c6236	translational termination	protein metabolism	P	Eukaryotic peptide chain release factor subunit 1-3 (Eukaryotic release factor 1-3) (eRF1-3) (Omnipotent suppressor protein 1 homolog 3) (SUP1 homolog 3)
ruditapes_c6236	translational termination	cell organization and biogenesis	P	Eukaryotic peptide chain release factor subunit 1-3 (Eukaryotic release factor 1-3) (eRF1-3) (Omnipotent suppressor protein 1 homolog 3) (SUP1 homolog 3)
ruditapes2_c3000	translational termination	protein metabolism	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1) (Omnipotent suppressor protein 1 homolog) (SUP1 homolog)
ruditapes2_c3000	translational termination	cell organization and biogenesis	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1) (Omnipotent suppressor protein 1 homolog) (SUP1 homolog)
ruditapes2_c3000	translation	protein metabolism	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1) (Omnipotent suppressor protein 1 homolog) (SUP1 homolog)
ruditapes2_c3000	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1) (Omnipotent suppressor protein 1 homolog) (SUP1 homolog)
ruditapes_c17537	positive regulation of cell division	other biological processes	P	Protein DVR-1
ruditapes_c17537	growth	other biological processes	P	Protein DVR-1
ruditapes_c12377	glucose transport	transport	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	RNA metabolic process	RNA metabolism	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	regulation of glucose transport	transport	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	viral reproduction	other biological processes	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	transmembrane transport	transport	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	hexose transport	transport	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	mRNA metabolic process	RNA metabolism	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	cytokine-mediated signaling pathway	signal transduction	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	protein transport	transport	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	transport	transport	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	mRNA export from nucleus	transport	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	protein export from nucleus	transport	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	gene expression	other metabolic processes	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	mRNA transport	transport	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	carbohydrate metabolic process	other metabolic processes	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	regulation of cell cycle	cell cycle and proliferation	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c12377	protein import into nucleus	transport	P	Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN)
ruditapes_c13327	glutathione biosynthetic process	other metabolic processes	P	Glutathione synthetase (EC 6.3.2.3) (GSH synthetase) (GSH-S) (GSHase) (Glutathione synthase)
ruditapes_c25278	gene silencing	other metabolic processes	P	Transcription factor SOX-6
ruditapes_c25278	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor SOX-6
ruditapes_c25278	hemopoiesis	developmental processes	P	Transcription factor SOX-6
ruditapes_c25278	positive regulation of chondrocyte differentiation	developmental processes	P	Transcription factor SOX-6
ruditapes_c25278	cartilage development	developmental processes	P	Transcription factor SOX-6
ruditapes_c25278	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor SOX-6
ruditapes_c25278	oligodendrocyte cell fate specification	developmental processes	P	Transcription factor SOX-6
ruditapes_c25278	muscle cell differentiation	other biological processes	P	Transcription factor SOX-6
ruditapes_c25278	multicellular organismal development	developmental processes	P	Transcription factor SOX-6
ruditapes_c25278	muscle organ development	developmental processes	P	Transcription factor SOX-6
ruditapes_c25278	cardiac cell differentiation	developmental processes	P	Transcription factor SOX-6
ruditapes_c25278	in utero embryonic development	developmental processes	P	Transcription factor SOX-6
ruditapes_c25278	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor SOX-6
ruditapes_c25278	erythrocyte development	developmental processes	P	Transcription factor SOX-6
ruditapes_c25278	cell morphogenesis	cell organization and biogenesis	P	Transcription factor SOX-6
ruditapes_c25278	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor SOX-6
ruditapes_c25278	oligodendrocyte differentiation	developmental processes	P	Transcription factor SOX-6
ruditapes_c25278	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor SOX-6
ruditapes_c25278	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor SOX-6
ruditapes_c25278	post-embryonic development	developmental processes	P	Transcription factor SOX-6
ruditapes_c25278	cell fate commitment	other biological processes	P	Transcription factor SOX-6
ruditapes2_c1889	electron transport chain	other metabolic processes	P	"Succinate dehydrogenase cytochrome b560 subunit, mitochondrial (Integral membrane protein CII-3) (QPs-1) (QPs1) (Succinate dehydrogenase complex subunit C)"
ruditapes2_c1889	transport	transport	P	"Succinate dehydrogenase cytochrome b560 subunit, mitochondrial (Integral membrane protein CII-3) (QPs-1) (QPs1) (Succinate dehydrogenase complex subunit C)"
ruditapes2_c1889	tricarboxylic acid cycle	other metabolic processes	P	"Succinate dehydrogenase cytochrome b560 subunit, mitochondrial (Integral membrane protein CII-3) (QPs-1) (QPs1) (Succinate dehydrogenase complex subunit C)"
ruditapes2_c5101	smooth muscle contraction	other biological processes	P	"Myosin-11 (Myosin heavy chain 11) (Myosin heavy chain, smooth muscle isoform) (SMMHC)"
ruditapes2_c5101	cardiac muscle fiber development	developmental processes	P	"Myosin-11 (Myosin heavy chain 11) (Myosin heavy chain, smooth muscle isoform) (SMMHC)"
ruditapes2_c5101	muscle contraction	other biological processes	P	"Myosin-11 (Myosin heavy chain 11) (Myosin heavy chain, smooth muscle isoform) (SMMHC)"
ruditapes2_c5101	axon guidance	cell organization and biogenesis	P	"Myosin-11 (Myosin heavy chain 11) (Myosin heavy chain, smooth muscle isoform) (SMMHC)"
ruditapes2_c5101	axon guidance	developmental processes	P	"Myosin-11 (Myosin heavy chain 11) (Myosin heavy chain, smooth muscle isoform) (SMMHC)"
ruditapes2_c5101	muscle thick filament assembly	developmental processes	P	"Myosin-11 (Myosin heavy chain 11) (Myosin heavy chain, smooth muscle isoform) (SMMHC)"
ruditapes2_c5101	muscle thick filament assembly	cell organization and biogenesis	P	"Myosin-11 (Myosin heavy chain 11) (Myosin heavy chain, smooth muscle isoform) (SMMHC)"
ruditapes2_c5101	elastic fiber assembly	cell organization and biogenesis	P	"Myosin-11 (Myosin heavy chain 11) (Myosin heavy chain, smooth muscle isoform) (SMMHC)"
ruditapes_c31861	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c31861	nucleoside metabolic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c21949	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase kappa (Protein-tyrosine phosphatase kappa) (R-PTP-kappa) (EC 3.1.3.48)
ruditapes_c21949	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase kappa (Protein-tyrosine phosphatase kappa) (R-PTP-kappa) (EC 3.1.3.48)
ruditapes_c15910	keratinocyte activation	developmental processes	P	"Keratin, type II cytoskeletal 2 epidermal (Cytokeratin-2e) (CK-2e) (Epithelial keratin-2e) (Keratin-2 epidermis) (Keratin-2e) (K2e) (Type-II keratin Kb2)"
ruditapes_c15910	keratinocyte proliferation	cell cycle and proliferation	P	"Keratin, type II cytoskeletal 2 epidermal (Cytokeratin-2e) (CK-2e) (Epithelial keratin-2e) (Keratin-2 epidermis) (Keratin-2e) (K2e) (Type-II keratin Kb2)"
ruditapes_c15910	keratinocyte migration	other biological processes	P	"Keratin, type II cytoskeletal 2 epidermal (Cytokeratin-2e) (CK-2e) (Epithelial keratin-2e) (Keratin-2 epidermis) (Keratin-2e) (K2e) (Type-II keratin Kb2)"
ruditapes_c15910	keratinization	developmental processes	P	"Keratin, type II cytoskeletal 2 epidermal (Cytokeratin-2e) (CK-2e) (Epithelial keratin-2e) (Keratin-2 epidermis) (Keratin-2e) (K2e) (Type-II keratin Kb2)"
ruditapes_c15910	epidermis development	developmental processes	P	"Keratin, type II cytoskeletal 2 epidermal (Cytokeratin-2e) (CK-2e) (Epithelial keratin-2e) (Keratin-2 epidermis) (Keratin-2e) (K2e) (Type-II keratin Kb2)"
ruditapes_c25404	"transcription, DNA-dependent"	RNA metabolism	P	RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); Putative helicase (EC 3.6.4.-) (58 kDa protein) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (24 kDa protein); RNA-directed RNA polymerase (EC 2.7.7.48) (87 kDa protein)]
ruditapes_c25404	viral genome replication	other biological processes	P	RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); Putative helicase (EC 3.6.4.-) (58 kDa protein) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (24 kDa protein); RNA-directed RNA polymerase (EC 2.7.7.48) (87 kDa protein)]
ruditapes_c25404	RNA-protein covalent cross-linking	protein metabolism	P	RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); Putative helicase (EC 3.6.4.-) (58 kDa protein) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (24 kDa protein); RNA-directed RNA polymerase (EC 2.7.7.48) (87 kDa protein)]
ruditapes_c1601	proteolysis	protein metabolism	P	RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); Putative helicase (EC 3.6.4.-) (58 kDa protein) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (24 kDa protein); RNA-directed RNA polymerase (EC 2.7.7.48) (87 kDa protein)]
ruditapes_c1601	RNA biosynthetic process	RNA metabolism	P	RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); Putative helicase (EC 3.6.4.-) (58 kDa protein) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (24 kDa protein); RNA-directed RNA polymerase (EC 2.7.7.48) (87 kDa protein)]
ruditapes_c1601	viral genome replication	other biological processes	P	RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); Putative helicase (EC 3.6.4.-) (58 kDa protein) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (24 kDa protein); RNA-directed RNA polymerase (EC 2.7.7.48) (87 kDa protein)]
ruditapes_c1601	"transcription, DNA-dependent"	RNA metabolism	P	RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); Putative helicase (EC 3.6.4.-) (58 kDa protein) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (24 kDa protein); RNA-directed RNA polymerase (EC 2.7.7.48) (87 kDa protein)]
ruditapes_c25404	RNA biosynthetic process	RNA metabolism	P	RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); Putative helicase (EC 3.6.4.-) (58 kDa protein) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (24 kDa protein); RNA-directed RNA polymerase (EC 2.7.7.48) (87 kDa protein)]
ruditapes_c1601	RNA-protein covalent cross-linking	protein metabolism	P	RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); Putative helicase (EC 3.6.4.-) (58 kDa protein) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (24 kDa protein); RNA-directed RNA polymerase (EC 2.7.7.48) (87 kDa protein)]
ruditapes_c25404	proteolysis	protein metabolism	P	RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); Putative helicase (EC 3.6.4.-) (58 kDa protein) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (24 kDa protein); RNA-directed RNA polymerase (EC 2.7.7.48) (87 kDa protein)]
ruditapes_lrc7141	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes2_lrc5160	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes2_lrc6050	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes_lrc35908	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes_lrc36284	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes_lrc38939	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes_lrc34070	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes_c5754	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes2_lrc5054	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes2_lrc6060	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes_lrc35269	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes_c16627	biological_process	other biological processes	P	Uncharacterized transcriptional regulatory protein YKL222C
ruditapes_c16627	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized transcriptional regulatory protein YKL222C
ruditapes_c16627	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized transcriptional regulatory protein YKL222C
ruditapes_c9876	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PTK1/STK1 (EC 2.7.11.1)
ruditapes_c9876	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PTK1/STK1 (EC 2.7.11.1)
ruditapes_c9876	polyamine transport	transport	P	Serine/threonine-protein kinase PTK1/STK1 (EC 2.7.11.1)
ruditapes_c8710	mitotic spindle elongation	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c8710	mitotic spindle elongation	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c8710	karyogamy	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c8710	nuclear migration along microtubule	transport	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c8710	establishment of mitotic spindle orientation	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c8710	establishment of mitotic spindle orientation	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c8710	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c8710	microtubule-based movement	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c552	protein amino acid O-linked glycosylation	protein metabolism	P	Protein MNN4
ruditapes2_c552	protein amino acid N-linked glycosylation	protein metabolism	P	Protein MNN4
ruditapes2_c552	response to stress	stress response	P	Protein MNN4
ruditapes_c13879	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Pre-mRNA-splicing factor SNU114 (114 kDa U5 small nuclear ribonucleoprotein component) (Growth inhibitory protein 10)
ruditapes_c13879	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor SNU114 (114 kDa U5 small nuclear ribonucleoprotein component) (Growth inhibitory protein 10)
ruditapes_c13879	spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)	RNA metabolism	P	Pre-mRNA-splicing factor SNU114 (114 kDa U5 small nuclear ribonucleoprotein component) (Growth inhibitory protein 10)
ruditapes_c13879	spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)	cell organization and biogenesis	P	Pre-mRNA-splicing factor SNU114 (114 kDa U5 small nuclear ribonucleoprotein component) (Growth inhibitory protein 10)
ruditapes_c13879	GTP catabolic process	other metabolic processes	P	Pre-mRNA-splicing factor SNU114 (114 kDa U5 small nuclear ribonucleoprotein component) (Growth inhibitory protein 10)
ruditapes_c13879	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor SNU114 (114 kDa U5 small nuclear ribonucleoprotein component) (Growth inhibitory protein 10)
ruditapes_c13879	assembly of spliceosomal tri-snRNP	RNA metabolism	P	Pre-mRNA-splicing factor SNU114 (114 kDa U5 small nuclear ribonucleoprotein component) (Growth inhibitory protein 10)
ruditapes_c13879	assembly of spliceosomal tri-snRNP	cell organization and biogenesis	P	Pre-mRNA-splicing factor SNU114 (114 kDa U5 small nuclear ribonucleoprotein component) (Growth inhibitory protein 10)
ruditapes_c25963	response to stress	stress response	P	Heat shock cognate protein 80
ruditapes_c25963	protein folding	protein metabolism	P	Heat shock cognate protein 80
ruditapes_c21946	choline metabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c21946	synaptogenesis	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c21946	synaptogenesis	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c21946	neurotransmitter catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c21946	neurotransmitter catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c21946	regulation of dendrite morphogenesis	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c21946	regulation of dendrite morphogenesis	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c21946	regulation of axonogenesis	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c21946	regulation of axonogenesis	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c21946	"synaptic transmission, cholinergic"	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes2_c956	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L19
ruditapes2_c956	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L19
ruditapes_c1966	translation	protein metabolism	P	60S ribosomal protein L19
ruditapes2_c956	translation	protein metabolism	P	60S ribosomal protein L19
ruditapes_c1966	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L19
ruditapes_c1966	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L19
ruditapes_c18415	glutathione biosynthetic process	other metabolic processes	P	Gamma-glutamyltranspeptidase (EC 2.3.2.2) (Glutathione hydrolase) (EC 3.4.19.13) [Cleaved into: Gamma-glutamyltranspeptidase large chain; Gamma-glutamyltranspeptidase small chain]
ruditapes_c27750	viral reproduction	other biological processes	P	RNA replicase polyprotein (EC 2.7.7.48)
ruditapes_c27750	viral genome replication	other biological processes	P	RNA replicase polyprotein (EC 2.7.7.48)
ruditapes_c27750	mRNA methylation	RNA metabolism	P	RNA replicase polyprotein (EC 2.7.7.48)
ruditapes_c27750	RNA processing	RNA metabolism	P	RNA replicase polyprotein (EC 2.7.7.48)
ruditapes_c27750	RNA biosynthetic process	RNA metabolism	P	RNA replicase polyprotein (EC 2.7.7.48)
ruditapes_c27750	"transcription, DNA-dependent"	RNA metabolism	P	RNA replicase polyprotein (EC 2.7.7.48)
ruditapes_c13174	interspecies interaction between organisms	other biological processes	P	Capsid protein VP1 (Coat protein VP1)
ruditapes_lrc14087	virion assembly	cell organization and biogenesis	P	Matrix protein
ruditapes_lrc15800	"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent"	other biological processes	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	antigen processing and presentation of endogenous peptide antigen via MHC class I	other biological processes	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	protection from natural killer cell mediated cytotoxicity	stress response	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	protection from natural killer cell mediated cytotoxicity	death	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	positive regulation of antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	peptide transport	transport	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	"antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent"	other biological processes	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	ATP catabolic process	other metabolic processes	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	positive regulation of T cell mediated cytotoxicity	death	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	transmembrane transport	transport	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	protein complex assembly	cell organization and biogenesis	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	response to molecule of bacterial origin	other biological processes	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent"	other biological processes	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	protein transport	transport	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_lrc15800	transport	transport	P	Antigen peptide transporter 2 (APT2) (ATP-binding cassette sub-family B member 3) (Histocompatibility antigen modifier 2)
ruditapes_c4537	biological_process	other biological processes	P	"Glandular kallikrein-7, submandibular/renal (rGK-7) (EC 3.4.21.35) (Esterase B) (Kallikrein-related protein K1) (Proteinase A) (RSKG-7) (Tissue kallikrein)"
ruditapes_c4537	proteolysis	protein metabolism	P	"Glandular kallikrein-7, submandibular/renal (rGK-7) (EC 3.4.21.35) (Esterase B) (Kallikrein-related protein K1) (Proteinase A) (RSKG-7) (Tissue kallikrein)"
ruditapes_lrc18846	proteolysis	protein metabolism	P	Glandular kallikrein-10 (K10) (rGK-10) (EC 3.4.21.35) (Endopeptidase K) (Proteinase B) (T-kininogenase) (Tissue kallikrein) [Cleaved into: T-kininogenase light chain; T-kininogenase heavy chain]
ruditapes_lrc18846	biological_process	other biological processes	P	Glandular kallikrein-10 (K10) (rGK-10) (EC 3.4.21.35) (Endopeptidase K) (Proteinase B) (T-kininogenase) (Tissue kallikrein) [Cleaved into: T-kininogenase light chain; T-kininogenase heavy chain]
ruditapes2_c5	ion transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc38059	ion transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc38059	oxidative phosphorylation	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc38059	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c5	transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c5	oxidative phosphorylation	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c5	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c5	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c5	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc38059	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc38059	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc38059	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc38059	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc38059	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c5	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc38059	transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c5	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc38059	proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c5	proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c5	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes2_c5	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc38059	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c15115	response to insecticide	other biological processes	P	"Coproporphyrinogen-III oxidase, mitochondrial (COX) (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_c15115	oxidation reduction	other metabolic processes	P	"Coproporphyrinogen-III oxidase, mitochondrial (COX) (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_c15115	porphyrin biosynthetic process	other metabolic processes	P	"Coproporphyrinogen-III oxidase, mitochondrial (COX) (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_c15115	response to lead ion	other biological processes	P	"Coproporphyrinogen-III oxidase, mitochondrial (COX) (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_c15115	response to arsenic	other biological processes	P	"Coproporphyrinogen-III oxidase, mitochondrial (COX) (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_c15115	response to methylmercury	other biological processes	P	"Coproporphyrinogen-III oxidase, mitochondrial (COX) (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_c15115	response to iron ion	other biological processes	P	"Coproporphyrinogen-III oxidase, mitochondrial (COX) (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_c15115	response to inorganic substance	other biological processes	P	"Coproporphyrinogen-III oxidase, mitochondrial (COX) (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_c15115	heme biosynthetic process	other metabolic processes	P	"Coproporphyrinogen-III oxidase, mitochondrial (COX) (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_c15115	protoporphyrinogen IX biosynthetic process	other metabolic processes	P	"Coproporphyrinogen-III oxidase, mitochondrial (COX) (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_c14275	metabolic process	other metabolic processes	P	8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (KAPA synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c14275	biosynthetic process	other metabolic processes	P	8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (KAPA synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c14275	biotin biosynthetic process	other metabolic processes	P	8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (KAPA synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c13060	cholesterol biosynthetic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes_c13060	lipid biosynthetic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes_c13060	ergosterol biosynthetic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes_c13060	isoprenoid biosynthetic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes_c13060	steroid biosynthetic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes_c13060	metabolic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes_c13060	biosynthetic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes_c13060	sterol biosynthetic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes_c13060	oxidation reduction	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes_c8963	thiamin biosynthetic process	other metabolic processes	P	Pyrimidine precursor biosynthesis enzyme thi3 (No message in thiamine protein 1)
ruditapes_c8963	regulation of thiamin biosynthetic process	other metabolic processes	P	Pyrimidine precursor biosynthesis enzyme thi3 (No message in thiamine protein 1)
ruditapes_c23285	cAMP catabolic process	other metabolic processes	P	"3',5'-cyclic-nucleotide phosphodiesterase (PDEase) (EC 3.1.4.17)"
ruditapes_c23285	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	"3',5'-cyclic-nucleotide phosphodiesterase (PDEase) (EC 3.1.4.17)"
ruditapes_c23285	cellular response to nitrogen starvation	stress response	P	"3',5'-cyclic-nucleotide phosphodiesterase (PDEase) (EC 3.1.4.17)"
ruditapes_c23285	cAMP-mediated signaling	signal transduction	P	"3',5'-cyclic-nucleotide phosphodiesterase (PDEase) (EC 3.1.4.17)"
ruditapes_c23285	negative regulation of adenylate cyclase activity	other metabolic processes	P	"3',5'-cyclic-nucleotide phosphodiesterase (PDEase) (EC 3.1.4.17)"
ruditapes_c23285	regulation of conjugation with cellular fusion	other biological processes	P	"3',5'-cyclic-nucleotide phosphodiesterase (PDEase) (EC 3.1.4.17)"
ruditapes_c21808	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor ste11
ruditapes_c21808	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor ste11
ruditapes_c21808	conjugation with cellular fusion	other biological processes	P	Transcription factor ste11
ruditapes_c21808	response to stress	stress response	P	Transcription factor ste11
ruditapes_c21808	"positive regulation of transcription, meiotic"	RNA metabolism	P	Transcription factor ste11
ruditapes_c22067	coenzyme A biosynthetic process	other metabolic processes	P	Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase)
ruditapes_c22067	phosphorylation	other metabolic processes	P	Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase)
ruditapes_c28697	DNA replication	DNA metabolism	P	Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1)
ruditapes_c20952	DNA replication	DNA metabolism	P	Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1)
ruditapes_c19368	interspecies interaction between organisms	other biological processes	P	Minor capsid protein L2
ruditapes_lrc27843	glutamine metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase arginine-specific small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_lrc27843	glutamine catabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase arginine-specific small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_lrc27843	carbamoyl phosphate biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase arginine-specific small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_lrc27843	cellular amino acid biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase arginine-specific small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_lrc27843	arginine biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase arginine-specific small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c18472	carbohydrate metabolic process	other metabolic processes	P	"Amylopullulanase (Alpha-amylase/pullulanase) [Includes: Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase); Pullulanase (EC 3.2.1.41) (1,4-alpha-D-glucan glucanohydrolase) (Alpha-dextrin endo-1,6-alpha-glucosidase)]"
ruditapes_c18472	metabolic process	other metabolic processes	P	"Amylopullulanase (Alpha-amylase/pullulanase) [Includes: Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase); Pullulanase (EC 3.2.1.41) (1,4-alpha-D-glucan glucanohydrolase) (Alpha-dextrin endo-1,6-alpha-glucosidase)]"
ruditapes_c23695	transport	transport	P	Afamin (Alpha-albumin) (Alpha-Alb)
ruditapes_c23695	vitamin transport	transport	P	Afamin (Alpha-albumin) (Alpha-Alb)
ruditapes_c31798	protein amino acid dephosphorylation	protein metabolism	P	Protein phosphatase 2C (PP2C) (EC 3.1.3.16)
ruditapes_lrc39656	protein secretion by the type II secretion system	transport	P	Type II secretion system protein E (T2SS protein E) (Cholera toxin secretion protein EpsE) (General secretion pathway protein E) (Type II traffic warden ATPase)
ruditapes_lrc39656	transport	transport	P	Type II secretion system protein E (T2SS protein E) (Cholera toxin secretion protein EpsE) (General secretion pathway protein E) (Type II traffic warden ATPase)
ruditapes_c28370	protein transport	transport	P	Type IV pilus assembly protein PilF
ruditapes_c28370	pilus assembly	cell organization and biogenesis	P	Type IV pilus assembly protein PilF
ruditapes_c28370	transport	transport	P	Type IV pilus assembly protein PilF
ruditapes_c16633	regulation of glucose transport	transport	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	cell aging	other biological processes	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	negative regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	viral reproduction	other biological processes	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	regulation of Ras protein signal transduction	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	nucleocytoplasmic transport	transport	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	cell death	death	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	cell surface receptor linked signal transduction	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	cytokine-mediated signaling pathway	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	regulation of signal transduction	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	carbohydrate metabolic process	other metabolic processes	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	mRNA transport	transport	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	transport	transport	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	positive regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	protein transport	transport	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	hormone-mediated signaling	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	negative regulation of MAP kinase activity	other metabolic processes	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	hexose transport	transport	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	negative regulation of programmed cell death	death	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	transmembrane transport	transport	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	negative regulation of Ras protein signal transduction	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	negative regulation of cell proliferation	cell cycle and proliferation	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	glucose transport	transport	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c16633	negative regulation of apoptosis	death	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c38713	"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	spindle organization	cell cycle and proliferation	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	spindle organization	cell organization and biogenesis	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	ncRNA catabolic process	RNA metabolism	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	mitotic sister chromatid segregation	cell cycle and proliferation	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay"	RNA metabolism	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	cell division	other biological processes	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	regulation of mitotic cell cycle	cell cycle and proliferation	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	rRNA processing	RNA metabolism	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	positive regulation of Ran GTPase activity	signal transduction	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	"nuclear-transcribed mRNA catabolic process, non-stop decay"	RNA metabolism	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	mitosis	cell cycle and proliferation	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	mitosis	cell organization and biogenesis	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	"exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	mitotic sister chromatid segregation	cell organization and biogenesis	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	cell cycle	cell cycle and proliferation	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	regulation of growth	other biological processes	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c38713	nonfunctional rRNA decay	RNA metabolism	P	Exosome complex exonuclease dis3 (EC 3.1.13.-) (EC 3.1.26.-) (Chromosome disjunction protein 3) (Mitotic control protein dis3) (Ribosomal RNA-processing protein 44)
ruditapes_c6162	negative regulation of ATPase activity	other biological processes	P	"ATPase inhibitor mai-1, mitochondrial"
ruditapes_c6162	negative regulation of catalytic activity	other biological processes	P	"ATPase inhibitor mai-1, mitochondrial"
ruditapes_c6162	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor mai-1, mitochondrial"
ruditapes_lrc21476	biosynthetic process	other metabolic processes	P	Aminodeoxychorismate synthase (ADC synthase) (EC 2.6.1.85) (P-aminobenzoic acid synthase) (PABA synthase) (Para-aminobenzoate synthase)
ruditapes_lrc21476	folic acid biosynthetic process	other metabolic processes	P	Aminodeoxychorismate synthase (ADC synthase) (EC 2.6.1.85) (P-aminobenzoic acid synthase) (PABA synthase) (Para-aminobenzoate synthase)
ruditapes_lrc21476	para-aminobenzoic acid biosynthetic process	other metabolic processes	P	Aminodeoxychorismate synthase (ADC synthase) (EC 2.6.1.85) (P-aminobenzoic acid synthase) (PABA synthase) (Para-aminobenzoate synthase)
ruditapes_lrc21476	metabolic process	other metabolic processes	P	Aminodeoxychorismate synthase (ADC synthase) (EC 2.6.1.85) (P-aminobenzoic acid synthase) (PABA synthase) (Para-aminobenzoate synthase)
ruditapes_lrc21476	glutamine metabolic process	other metabolic processes	P	Aminodeoxychorismate synthase (ADC synthase) (EC 2.6.1.85) (P-aminobenzoic acid synthase) (PABA synthase) (Para-aminobenzoate synthase)
ruditapes2_c6753	mushroom body development	developmental processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	pole cell formation	developmental processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	regulation of mitotic metaphase/anaphase transition	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	regulation of mitotic metaphase/anaphase transition	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	centrosome localization	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	oogenesis	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	germ-line cyst formation	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	mitochondrion transport along microtubule	transport	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	establishment or maintenance of epithelial cell apical/basal polarity	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	maintenance of RNA location	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	positive regulation of mitotic centrosome separation	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	positive regulation of mitotic centrosome separation	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	establishment of epithelial cell apical/basal polarity	developmental processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	establishment of epithelial cell apical/basal polarity	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	microtubule-based movement	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	centrosome cycle	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	axon cargo transport	transport	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	cystoblast division	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	dendrite morphogenesis	developmental processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	dendrite morphogenesis	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	cellularization	developmental processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	chitin-based cuticle development	developmental processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	mitotic spindle organization	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	mitotic spindle organization	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	centrosome cycle	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	neuroblast proliferation	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	neuroblast proliferation	developmental processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	establishment of Golgi localization	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	mitotic spindle stabilization	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	mitotic spindle stabilization	protein metabolism	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	mitotic spindle stabilization	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	spindle organization	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	spindle organization	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	ovarian ring canal formation	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	establishment of mitotic spindle localization	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	establishment of mitotic spindle localization	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	oocyte nucleus migration during oocyte axis specification	developmental processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	oocyte nucleus migration during oocyte axis specification	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	intracellular mRNA localization	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	mitosis	cell cycle and proliferation	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	mitosis	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	fusome organization	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	ovarian ring canal formation	transport	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	stress granule assembly	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	germarium-derived oocyte fate determination	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	mitochondrion distribution	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	intracellular protein transport	transport	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	RNA transport	transport	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c6753	ovarian fusome organization	cell organization and biogenesis	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c1199	metabolic process	other metabolic processes	P	Probable calcium-transporting ATPase (EC 3.6.3.8) (Calcium pump)
ruditapes_c1199	cation transport	transport	P	Probable calcium-transporting ATPase (EC 3.6.3.8) (Calcium pump)
ruditapes_c1199	calcium ion transport	transport	P	Probable calcium-transporting ATPase (EC 3.6.3.8) (Calcium pump)
ruditapes_c1199	ion transport	transport	P	Probable calcium-transporting ATPase (EC 3.6.3.8) (Calcium pump)
ruditapes_c1199	transport	transport	P	Probable calcium-transporting ATPase (EC 3.6.3.8) (Calcium pump)
ruditapes_c16189	cellular protein metabolic process	protein metabolism	P	Phosphatidylinositol N-acetylglucosaminyltransferase subunit A (EC 2.4.1.198) (GlcNAc-PI synthesis protein) (Phosphatidylinositol-glycan biosynthesis class A protein) (PIG-A)
ruditapes_c16189	preassembly of GPI anchor in ER membrane	protein metabolism	P	Phosphatidylinositol N-acetylglucosaminyltransferase subunit A (EC 2.4.1.198) (GlcNAc-PI synthesis protein) (Phosphatidylinositol-glycan biosynthesis class A protein) (PIG-A)
ruditapes_c16189	GPI anchor biosynthetic process	protein metabolism	P	Phosphatidylinositol N-acetylglucosaminyltransferase subunit A (EC 2.4.1.198) (GlcNAc-PI synthesis protein) (Phosphatidylinositol-glycan biosynthesis class A protein) (PIG-A)
ruditapes_c16189	post-translational protein modification	protein metabolism	P	Phosphatidylinositol N-acetylglucosaminyltransferase subunit A (EC 2.4.1.198) (GlcNAc-PI synthesis protein) (Phosphatidylinositol-glycan biosynthesis class A protein) (PIG-A)
ruditapes_c16189	C-terminal protein lipidation	protein metabolism	P	Phosphatidylinositol N-acetylglucosaminyltransferase subunit A (EC 2.4.1.198) (GlcNAc-PI synthesis protein) (Phosphatidylinositol-glycan biosynthesis class A protein) (PIG-A)
ruditapes_c16189	positive regulation of metabolic process	other metabolic processes	P	Phosphatidylinositol N-acetylglucosaminyltransferase subunit A (EC 2.4.1.198) (GlcNAc-PI synthesis protein) (Phosphatidylinositol-glycan biosynthesis class A protein) (PIG-A)
ruditapes_c16189	biosynthetic process	other metabolic processes	P	Phosphatidylinositol N-acetylglucosaminyltransferase subunit A (EC 2.4.1.198) (GlcNAc-PI synthesis protein) (Phosphatidylinositol-glycan biosynthesis class A protein) (PIG-A)
ruditapes_c11320	phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-kinase STT4 (PI4-kinase) (PtdIns-4-kinase) (EC 2.7.1.67)
ruditapes_c11320	phosphoinositide-mediated signaling	signal transduction	P	Phosphatidylinositol 4-kinase STT4 (PI4-kinase) (PtdIns-4-kinase) (EC 2.7.1.67)
ruditapes_c11320	phosphoinositide phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-kinase STT4 (PI4-kinase) (PtdIns-4-kinase) (EC 2.7.1.67)
ruditapes_c4612	phosphorylation	other metabolic processes	P	PTS system glucose-specific EIICB component (EIICB-Glc) (EII-Glc) [Includes: Glucose permease IIC component (PTS system glucose-specific EIIC component); Glucose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system glucose-specific EIIB component)]
ruditapes_c4612	transport	transport	P	PTS system glucose-specific EIICB component (EIICB-Glc) (EII-Glc) [Includes: Glucose permease IIC component (PTS system glucose-specific EIIC component); Glucose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system glucose-specific EIIB component)]
ruditapes_c4612	glucose transport	transport	P	PTS system glucose-specific EIICB component (EIICB-Glc) (EII-Glc) [Includes: Glucose permease IIC component (PTS system glucose-specific EIIC component); Glucose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system glucose-specific EIIB component)]
ruditapes_c4612	phosphoenolpyruvate-dependent sugar phosphotransferase system	signal transduction	P	PTS system glucose-specific EIICB component (EIICB-Glc) (EII-Glc) [Includes: Glucose permease IIC component (PTS system glucose-specific EIIC component); Glucose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system glucose-specific EIIB component)]
ruditapes_c4612	phosphoenolpyruvate-dependent sugar phosphotransferase system	transport	P	PTS system glucose-specific EIICB component (EIICB-Glc) (EII-Glc) [Includes: Glucose permease IIC component (PTS system glucose-specific EIIC component); Glucose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system glucose-specific EIIB component)]
ruditapes_c4612	carbohydrate transport	transport	P	PTS system glucose-specific EIICB component (EIICB-Glc) (EII-Glc) [Includes: Glucose permease IIC component (PTS system glucose-specific EIIC component); Glucose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system glucose-specific EIIB component)]
ruditapes_c10616	DNA repair	stress response	P	Exodeoxyribonuclease (EC 3.1.11.2)
ruditapes_c10616	DNA repair	DNA metabolism	P	Exodeoxyribonuclease (EC 3.1.11.2)
ruditapes2_c37	rRNA modification	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes2_c37	methylation	other metabolic processes	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes2_c37	rRNA processing	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes2_c37	rRNA methylation	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_lrc33500	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Pur operon repressor
ruditapes_lrc33500	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Pur operon repressor
ruditapes_lrc33500	negative regulation of purine base metabolic process	other metabolic processes	P	Pur operon repressor
ruditapes_lrc33500	"transcription, DNA-dependent"	RNA metabolism	P	Pur operon repressor
ruditapes_lrc33500	nucleoside metabolic process	other metabolic processes	P	Pur operon repressor
ruditapes_lrc13832	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase YabT (EC 2.7.11.1)
ruditapes_lrc13832	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase YabT (EC 2.7.11.1)
ruditapes_lrc28361	metabolic process	other metabolic processes	P	Phosphoethanolamine transferase EptB (EC 2.7.-.-)
ruditapes_lrc28361	lipid biosynthetic process	other metabolic processes	P	Phosphoethanolamine transferase EptB (EC 2.7.-.-)
ruditapes_lrc28361	lipid A biosynthetic process	other metabolic processes	P	Phosphoethanolamine transferase EptB (EC 2.7.-.-)
ruditapes_lrc28361	lipopolysaccharide biosynthetic process	other metabolic processes	P	Phosphoethanolamine transferase EptB (EC 2.7.-.-)
ruditapes_s39225	cellulose biosynthetic process	other metabolic processes	P	Cyclic di-GMP-binding protein (CDGBP) (Cellulose synthase regulatory subunit) (Cellulose synthase protein B)
ruditapes_s39225	UDP-glucose metabolic process	other metabolic processes	P	Cyclic di-GMP-binding protein (CDGBP) (Cellulose synthase regulatory subunit) (Cellulose synthase protein B)
ruditapes2_c248	lipopolysaccharide biosynthetic process	other metabolic processes	P	dTDP-rhamnosyl transferase RfbF (EC 2.4.-.-)
ruditapes_lrc35507	cytoskeleton organization	cell organization and biogenesis	P	Transgelin (Actin-associated protein p27) (Smooth muscle protein 22-alpha) (SM22-alpha)
ruditapes_lrc35507	muscle organ development	developmental processes	P	Transgelin (Actin-associated protein p27) (Smooth muscle protein 22-alpha) (SM22-alpha)
ruditapes_c4095	muscle organ development	developmental processes	P	Transgelin-3 (Neuronal protein 22) (NP22) (Neuronal protein NP25)
ruditapes2_c268	muscle organ development	developmental processes	P	Transgelin-3 (Neuronal protein 22) (NP22) (Neuronal protein NP25)
ruditapes_lrc38539	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes_lrc35701	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes2_lrc6064	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes2_lrc5817	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes_lrc37081	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes2_lrc6296	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes2_lrc6044	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes_lrc36156	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes_c28613	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes_c4084	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes2_lrc5300	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes2_lrc3829	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes_lrc33125	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes_lrc7057	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes2_c1062	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes_lrc16946	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes2_lrc5237	locomotion	other biological processes	P	Protein unc-87 (Uncoordinated protein 87)
ruditapes_c330	negative regulation of peptidase activity	other biological processes	P	Multicystatin (MC)
ruditapes_c19486	transport	transport	P	Outer membrane usher protein PefC
ruditapes_c27017	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27017	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27017	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27017	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27017	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_s36747	metabolic process	other metabolic processes	P	2-oxoisovalerate dehydrogenase subunit beta (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta)
ruditapes_s36747	oxidation reduction	other metabolic processes	P	2-oxoisovalerate dehydrogenase subunit beta (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta)
ruditapes_c14793	transport	transport	P	Glycerol-3-phosphate transporter (G-3-P transporter) (G-3-P permease)
ruditapes_c14793	glycerol metabolic process	other metabolic processes	P	Glycerol-3-phosphate transporter (G-3-P transporter) (G-3-P permease)
ruditapes_c14793	glycerol-3-phosphate transport	transport	P	Glycerol-3-phosphate transporter (G-3-P transporter) (G-3-P permease)
ruditapes_c14793	transmembrane transport	transport	P	Glycerol-3-phosphate transporter (G-3-P transporter) (G-3-P permease)
ruditapes_c18816	methylation	other metabolic processes	P	HNRNP arginine N-methyltransferase (EC 2.1.1.-) (Protein ODP1)
ruditapes_c18816	peptidyl-arginine omega-N-methylation	protein metabolism	P	HNRNP arginine N-methyltransferase (EC 2.1.1.-) (Protein ODP1)
ruditapes_c18816	peptidyl-arginine methylation	protein metabolism	P	HNRNP arginine N-methyltransferase (EC 2.1.1.-) (Protein ODP1)
ruditapes_c18816	mRNA export from nucleus	transport	P	HNRNP arginine N-methyltransferase (EC 2.1.1.-) (Protein ODP1)
ruditapes_c18816	"peptidyl-arginine methylation, to asymmetrical-dimethyl arginine"	protein metabolism	P	HNRNP arginine N-methyltransferase (EC 2.1.1.-) (Protein ODP1)
ruditapes_c18816	positive regulation of RNA elongation from RNA polymerase II promoter	RNA metabolism	P	HNRNP arginine N-methyltransferase (EC 2.1.1.-) (Protein ODP1)
ruditapes_c18816	negative regulation of transcription termination	protein metabolism	P	HNRNP arginine N-methyltransferase (EC 2.1.1.-) (Protein ODP1)
ruditapes_c18816	negative regulation of transcription termination	RNA metabolism	P	HNRNP arginine N-methyltransferase (EC 2.1.1.-) (Protein ODP1)
ruditapes_c18816	negative regulation of transcription termination	cell organization and biogenesis	P	HNRNP arginine N-methyltransferase (EC 2.1.1.-) (Protein ODP1)
ruditapes_c26627	telomere maintenance	cell organization and biogenesis	P	COMPASS component SWD3 (Complex proteins associated with SET1 protein SWD3) (Set1C component SWD3)
ruditapes_c26627	chromatin silencing at telomere	RNA metabolism	P	COMPASS component SWD3 (Complex proteins associated with SET1 protein SWD3) (Set1C component SWD3)
ruditapes_c26627	histone H3-K4 methylation	protein metabolism	P	COMPASS component SWD3 (Complex proteins associated with SET1 protein SWD3) (Set1C component SWD3)
ruditapes_c26627	histone H3-K4 methylation	cell organization and biogenesis	P	COMPASS component SWD3 (Complex proteins associated with SET1 protein SWD3) (Set1C component SWD3)
ruditapes_c26627	telomere maintenance	DNA metabolism	P	COMPASS component SWD3 (Complex proteins associated with SET1 protein SWD3) (Set1C component SWD3)
ruditapes_c12614	riboflavin biosynthetic process	other metabolic processes	P	Riboflavin synthase (RS) (EC 2.5.1.9)
ruditapes_c12614	oxidation reduction	other metabolic processes	P	Riboflavin synthase (RS) (EC 2.5.1.9)
ruditapes_c12684	glutathione catabolic process	other metabolic processes	P	Probable di- and tripeptidase DUG2 (EC 3.4.-.-) (Deficient in utilization of glutathione protein 2) (GSH degradosomal complex subunit DUG2)
ruditapes_c12684	proteolysis	protein metabolism	P	Probable di- and tripeptidase DUG2 (EC 3.4.-.-) (Deficient in utilization of glutathione protein 2) (GSH degradosomal complex subunit DUG2)
ruditapes_c12684	metabolic process	other metabolic processes	P	Probable di- and tripeptidase DUG2 (EC 3.4.-.-) (Deficient in utilization of glutathione protein 2) (GSH degradosomal complex subunit DUG2)
ruditapes_c30118	transport	transport	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	piecemeal microautophagy of nucleus	other metabolic processes	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	piecemeal microautophagy of nucleus	cell organization and biogenesis	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	macroautophagy	stress response	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	macroautophagy	other metabolic processes	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	positive regulation of autophagy	other metabolic processes	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	protein transport	transport	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	ER-associated protein catabolic process	protein metabolism	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	CVT pathway	transport	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	CVT pathway	other metabolic processes	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	autophagy	other metabolic processes	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	peroxisome degradation	other metabolic processes	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c30118	peroxisome degradation	cell organization and biogenesis	P	Autophagy-related protein 14 (Cytoplasm to vacuole targeting protein 12)
ruditapes_c26783	rRNA processing	RNA metabolism	P	Ribonucleases P/MRP protein subunit POP7 (EC 3.1.26.5) (RNA-processing protein POP7) (RNases P/MRP 15.8 kDa subunit)
ruditapes_c26783	tRNA processing	RNA metabolism	P	Ribonucleases P/MRP protein subunit POP7 (EC 3.1.26.5) (RNA-processing protein POP7) (RNases P/MRP 15.8 kDa subunit)
ruditapes_c26783	intronic box C/D snoRNA processing	RNA metabolism	P	Ribonucleases P/MRP protein subunit POP7 (EC 3.1.26.5) (RNA-processing protein POP7) (RNases P/MRP 15.8 kDa subunit)
ruditapes_c26783	mRNA cleavage	RNA metabolism	P	Ribonucleases P/MRP protein subunit POP7 (EC 3.1.26.5) (RNA-processing protein POP7) (RNases P/MRP 15.8 kDa subunit)
ruditapes_c20949	signal transduction	signal transduction	P	F-box protein COS111 (Ciclopirox olamine sensitivity protein 111)
ruditapes_c6955	metabolic process	other metabolic processes	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_c6955	metal ion transport	transport	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_c6955	cadmium ion transport	transport	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_c6955	ATP biosynthetic process	other metabolic processes	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_c6955	ion transport	transport	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_c6955	cellular iron ion homeostasis	other biological processes	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_c6955	response to cadmium ion	other biological processes	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_c6955	cation transport	transport	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_c6955	cellular metal ion homeostasis	other biological processes	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_c6955	ATP metabolic process	other metabolic processes	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_c6955	transport	transport	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_c6955	transmembrane transport	transport	P	P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase)
ruditapes_s38719	protein transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_s38719	transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc18028	signal transduction	signal transduction	P	Guanine nucleotide-binding protein G(q) subunit alpha (Guanine nucleotide-binding protein alpha-q)
ruditapes_lrc18028	protein amino acid ADP-ribosylation	protein metabolism	P	Guanine nucleotide-binding protein G(q) subunit alpha (Guanine nucleotide-binding protein alpha-q)
ruditapes_lrc18028	G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein G(q) subunit alpha (Guanine nucleotide-binding protein alpha-q)
ruditapes_c18037	lipid biosynthetic process	other metabolic processes	P	Linoleate 9S-lipoxygenase A (EC 1.13.11.58) (Lipoxygenase A)
ruditapes_c18037	oxidation reduction	other metabolic processes	P	Linoleate 9S-lipoxygenase A (EC 1.13.11.58) (Lipoxygenase A)
ruditapes_c18037	oxylipin biosynthetic process	other metabolic processes	P	Linoleate 9S-lipoxygenase A (EC 1.13.11.58) (Lipoxygenase A)
ruditapes_c18037	fatty acid biosynthetic process	other metabolic processes	P	Linoleate 9S-lipoxygenase A (EC 1.13.11.58) (Lipoxygenase A)
ruditapes_c16814	response to bacterium	other biological processes	P	"Lipoxygenase 2, chloroplastic (AtLOX2) (EC 1.13.11.12)"
ruditapes_c16814	oxylipin biosynthetic process	other metabolic processes	P	"Lipoxygenase 2, chloroplastic (AtLOX2) (EC 1.13.11.12)"
ruditapes_c16814	response to wounding	stress response	P	"Lipoxygenase 2, chloroplastic (AtLOX2) (EC 1.13.11.12)"
ruditapes_c16814	oxidation reduction	other metabolic processes	P	"Lipoxygenase 2, chloroplastic (AtLOX2) (EC 1.13.11.12)"
ruditapes_c16814	fatty acid biosynthetic process	other metabolic processes	P	"Lipoxygenase 2, chloroplastic (AtLOX2) (EC 1.13.11.12)"
ruditapes_c16814	response to jasmonic acid stimulus	other biological processes	P	"Lipoxygenase 2, chloroplastic (AtLOX2) (EC 1.13.11.12)"
ruditapes_c16814	response to herbivore	other biological processes	P	"Lipoxygenase 2, chloroplastic (AtLOX2) (EC 1.13.11.12)"
ruditapes_c16814	lipid biosynthetic process	other metabolic processes	P	"Lipoxygenase 2, chloroplastic (AtLOX2) (EC 1.13.11.12)"
ruditapes_c16814	response to fungus	other biological processes	P	"Lipoxygenase 2, chloroplastic (AtLOX2) (EC 1.13.11.12)"
ruditapes_c16814	jasmonic acid biosynthetic process	other metabolic processes	P	"Lipoxygenase 2, chloroplastic (AtLOX2) (EC 1.13.11.12)"
ruditapes2_c2582	response to stress	stress response	P	"Trehalose synthase complex regulatory subunit TSL1 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 123 kDa subunit)"
ruditapes2_c2582	regulation of catalytic activity	other biological processes	P	"Trehalose synthase complex regulatory subunit TSL1 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 123 kDa subunit)"
ruditapes_c9790	trehalose biosynthetic process	other metabolic processes	P	"Trehalose synthase complex regulatory subunit TSL1 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 123 kDa subunit)"
ruditapes_c9790	regulation of catalytic activity	other biological processes	P	"Trehalose synthase complex regulatory subunit TSL1 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 123 kDa subunit)"
ruditapes_c9790	response to stress	stress response	P	"Trehalose synthase complex regulatory subunit TSL1 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 123 kDa subunit)"
ruditapes2_c2582	trehalose biosynthetic process	other metabolic processes	P	"Trehalose synthase complex regulatory subunit TSL1 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 123 kDa subunit)"
ruditapes_c5457	regulation of interferon-gamma-mediated signaling pathway	signal transduction	P	Interferon gamma receptor 2 (IFN-gamma receptor 2) (IFN-gamma-R2) (Interferon gamma receptor accessory factor 1) (AF-1) (Interferon gamma transducer 1)
ruditapes_c5457	response to virus	other biological processes	P	Interferon gamma receptor 2 (IFN-gamma receptor 2) (IFN-gamma-R2) (Interferon gamma receptor accessory factor 1) (AF-1) (Interferon gamma transducer 1)
ruditapes_c5457	interferon-gamma-mediated signaling pathway	signal transduction	P	Interferon gamma receptor 2 (IFN-gamma receptor 2) (IFN-gamma-R2) (Interferon gamma receptor accessory factor 1) (AF-1) (Interferon gamma transducer 1)
ruditapes_c5457	cytokine-mediated signaling pathway	signal transduction	P	Interferon gamma receptor 2 (IFN-gamma receptor 2) (IFN-gamma-R2) (Interferon gamma receptor accessory factor 1) (AF-1) (Interferon gamma transducer 1)
ruditapes_c5457	cell surface receptor linked signal transduction	signal transduction	P	Interferon gamma receptor 2 (IFN-gamma receptor 2) (IFN-gamma-R2) (Interferon gamma receptor accessory factor 1) (AF-1) (Interferon gamma transducer 1)
ruditapes_s37688	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c17771	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37857	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37688	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37688	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c17771	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c17771	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37688	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37857	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37857	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36471	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37688	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36471	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37857	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36471	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36471	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c17771	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c4685	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c4685	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37857	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36471	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c4685	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c17771	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37857	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc36471	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s37688	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c17771	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c4685	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c4685	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c4685	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c3120	cell-matrix adhesion	cell adhesion	P	Ependymin (EPD)
ruditapes2_c1986	proteolysis	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit PRE3) (Multicatalytic endopeptidase complex subunit PRE3) (Proteasome component PRE3) (Proteinase YSCE subunit PRE3)
ruditapes2_c1986	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit PRE3) (Multicatalytic endopeptidase complex subunit PRE3) (Proteasome component PRE3) (Proteinase YSCE subunit PRE3)
ruditapes2_c1986	proteasomal ubiquitin-independent protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit PRE3) (Multicatalytic endopeptidase complex subunit PRE3) (Proteasome component PRE3) (Proteinase YSCE subunit PRE3)
ruditapes2_c1986	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1 (EC 3.4.25.1) (Macropain subunit PRE3) (Multicatalytic endopeptidase complex subunit PRE3) (Proteasome component PRE3) (Proteinase YSCE subunit PRE3)
ruditapes_c19696	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase 2 (EC 6.3.4.2) (CTP synthetase 2) (UTP--ammonia ligase 2)
ruditapes_c19696	glutamine metabolic process	other metabolic processes	P	CTP synthase 2 (EC 6.3.4.2) (CTP synthetase 2) (UTP--ammonia ligase 2)
ruditapes_c19696	CTP biosynthetic process	other metabolic processes	P	CTP synthase 2 (EC 6.3.4.2) (CTP synthetase 2) (UTP--ammonia ligase 2)
ruditapes_c19696	phospholipid biosynthetic process	other metabolic processes	P	CTP synthase 2 (EC 6.3.4.2) (CTP synthetase 2) (UTP--ammonia ligase 2)
ruditapes_c19696	pyrimidine base biosynthetic process	other metabolic processes	P	CTP synthase 2 (EC 6.3.4.2) (CTP synthetase 2) (UTP--ammonia ligase 2)
ruditapes_c842	positive regulation of endocytosis	transport	P	"1,3-beta-glucan synthase component FKS1 (EC 2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase) (Calcineurin dependent protein 1) (Calcofluor white hypersensitivity protein 53) (Echinocandin target gene protein 1) (FK506 sensitivity protein 1) (Glucan synthase of cerevisiae protein 1) (Papulacandin B resistance protein 1)"
ruditapes_c842	positive regulation of endocytosis	cell organization and biogenesis	P	"1,3-beta-glucan synthase component FKS1 (EC 2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase) (Calcineurin dependent protein 1) (Calcofluor white hypersensitivity protein 53) (Echinocandin target gene protein 1) (FK506 sensitivity protein 1) (Glucan synthase of cerevisiae protein 1) (Papulacandin B resistance protein 1)"
ruditapes_c842	"1,3-beta-glucan biosynthetic process"	other metabolic processes	P	"1,3-beta-glucan synthase component FKS1 (EC 2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase) (Calcineurin dependent protein 1) (Calcofluor white hypersensitivity protein 53) (Echinocandin target gene protein 1) (FK506 sensitivity protein 1) (Glucan synthase of cerevisiae protein 1) (Papulacandin B resistance protein 1)"
ruditapes_c842	regulation of cell shape	cell organization and biogenesis	P	"1,3-beta-glucan synthase component FKS1 (EC 2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase) (Calcineurin dependent protein 1) (Calcofluor white hypersensitivity protein 53) (Echinocandin target gene protein 1) (FK506 sensitivity protein 1) (Glucan synthase of cerevisiae protein 1) (Papulacandin B resistance protein 1)"
ruditapes_c842	cell wall organization	cell organization and biogenesis	P	"1,3-beta-glucan synthase component FKS1 (EC 2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase) (Calcineurin dependent protein 1) (Calcofluor white hypersensitivity protein 53) (Echinocandin target gene protein 1) (FK506 sensitivity protein 1) (Glucan synthase of cerevisiae protein 1) (Papulacandin B resistance protein 1)"
ruditapes_c842	regulation of cell size	other biological processes	P	"1,3-beta-glucan synthase component FKS1 (EC 2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase) (Calcineurin dependent protein 1) (Calcofluor white hypersensitivity protein 53) (Echinocandin target gene protein 1) (FK506 sensitivity protein 1) (Glucan synthase of cerevisiae protein 1) (Papulacandin B resistance protein 1)"
ruditapes_c29638	glycerol ether metabolic process	other metabolic processes	P	Protein disulfide-isomerase A3 (EC 5.3.4.1) (58 kDa glucose-regulated protein) (58 kDa microsomal protein) (p58) (Disulfide isomerase ER-60) (Endoplasmic reticulum resident protein 57) (ER protein 57) (ERp57) (Endoplasmic reticulum resident protein 60) (ER protein 60) (ERp60)
ruditapes_c29638	positive regulation of apoptosis	death	P	Protein disulfide-isomerase A3 (EC 5.3.4.1) (58 kDa glucose-regulated protein) (58 kDa microsomal protein) (p58) (Disulfide isomerase ER-60) (Endoplasmic reticulum resident protein 57) (ER protein 57) (ERp57) (Endoplasmic reticulum resident protein 60) (ER protein 60) (ERp60)
ruditapes_c29638	cell redox homeostasis	other biological processes	P	Protein disulfide-isomerase A3 (EC 5.3.4.1) (58 kDa glucose-regulated protein) (58 kDa microsomal protein) (p58) (Disulfide isomerase ER-60) (Endoplasmic reticulum resident protein 57) (ER protein 57) (ERp57) (Endoplasmic reticulum resident protein 60) (ER protein 60) (ERp60)
ruditapes_c26467	cell morphogenesis	cell organization and biogenesis	P	Serine/threonine-protein kinase KIC1 (EC 2.7.11.1) (Kinase that interacts with CDC31) (N-rich kinase 1)
ruditapes_c26467	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase KIC1 (EC 2.7.11.1) (Kinase that interacts with CDC31) (N-rich kinase 1)
ruditapes_c26467	fungal-type cell wall organization	cell organization and biogenesis	P	Serine/threonine-protein kinase KIC1 (EC 2.7.11.1) (Kinase that interacts with CDC31) (N-rich kinase 1)
ruditapes_c26467	budding cell apical bud growth	other biological processes	P	Serine/threonine-protein kinase KIC1 (EC 2.7.11.1) (Kinase that interacts with CDC31) (N-rich kinase 1)
ruditapes_c26467	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase KIC1 (EC 2.7.11.1) (Kinase that interacts with CDC31) (N-rich kinase 1)
ruditapes_lrc28700	regulation of transcription from RNA polymerase II promoter in response to oxidative stress	stress response	P	Protein STB5
ruditapes_lrc28700	regulation of transcription from RNA polymerase II promoter in response to oxidative stress	RNA metabolism	P	Protein STB5
ruditapes_c13015	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein STB5
ruditapes_c13015	response to xenobiotic stimulus	other biological processes	P	Protein STB5
ruditapes_c13015	regulation of transcription from RNA polymerase II promoter in response to oxidative stress	stress response	P	Protein STB5
ruditapes_c13015	regulation of transcription from RNA polymerase II promoter in response to oxidative stress	RNA metabolism	P	Protein STB5
ruditapes_c13015	"transcription, DNA-dependent"	RNA metabolism	P	Protein STB5
ruditapes_lrc28700	"transcription, DNA-dependent"	RNA metabolism	P	Protein STB5
ruditapes_lrc28700	response to xenobiotic stimulus	other biological processes	P	Protein STB5
ruditapes_lrc28700	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein STB5
ruditapes_c9750	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein SIP3
ruditapes_c19590	response to stress	stress response	P	Cell wall integrity and stress response component 4
ruditapes_c19590	cell wall organization	cell organization and biogenesis	P	Cell wall integrity and stress response component 4
ruditapes_c19590	protein targeting to ER	transport	P	Cell wall integrity and stress response component 4
ruditapes_c19590	response to heat	stress response	P	Cell wall integrity and stress response component 4
ruditapes_c12162	response to ethanol	other biological processes	P	RING finger protein ETP1 (BRAP2 homolog) (Ethanol tolerance protein 1)
ruditapes_lrc36299	nitrogen compound metabolic process	other metabolic processes	P	Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing])
ruditapes_lrc36299	NAD biosynthetic process	other metabolic processes	P	Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing])
ruditapes_c15729	biological_process	other biological processes	P	Uncharacterized protein YHR080C
ruditapes_c26009	biological_process	other biological processes	P	Uncharacterized protein YHR080C
ruditapes_c8316	biological_process	other biological processes	P	PH domain-containing protein YHR131C
ruditapes_c20485	telomere maintenance	DNA metabolism	P	DNA replication ATP-dependent helicase/nuclease DNA2 [Includes: DNA replication nuclease DNA2 (EC 3.1.-.-); DNA replication ATP-dependent helicase DNA2 (EC 3.6.4.12)]
ruditapes_c20485	telomere maintenance	cell organization and biogenesis	P	DNA replication ATP-dependent helicase/nuclease DNA2 [Includes: DNA replication nuclease DNA2 (EC 3.1.-.-); DNA replication ATP-dependent helicase DNA2 (EC 3.6.4.12)]
ruditapes_c20485	DNA strand renaturation	stress response	P	DNA replication ATP-dependent helicase/nuclease DNA2 [Includes: DNA replication nuclease DNA2 (EC 3.1.-.-); DNA replication ATP-dependent helicase DNA2 (EC 3.6.4.12)]
ruditapes_c20485	DNA strand renaturation	DNA metabolism	P	DNA replication ATP-dependent helicase/nuclease DNA2 [Includes: DNA replication nuclease DNA2 (EC 3.1.-.-); DNA replication ATP-dependent helicase DNA2 (EC 3.6.4.12)]
ruditapes_c20485	DNA-dependent DNA replication	DNA metabolism	P	DNA replication ATP-dependent helicase/nuclease DNA2 [Includes: DNA replication nuclease DNA2 (EC 3.1.-.-); DNA replication ATP-dependent helicase DNA2 (EC 3.6.4.12)]
ruditapes_c20485	lagging strand elongation	DNA metabolism	P	DNA replication ATP-dependent helicase/nuclease DNA2 [Includes: DNA replication nuclease DNA2 (EC 3.1.-.-); DNA replication ATP-dependent helicase DNA2 (EC 3.6.4.12)]
ruditapes_c20485	DNA repair	stress response	P	DNA replication ATP-dependent helicase/nuclease DNA2 [Includes: DNA replication nuclease DNA2 (EC 3.1.-.-); DNA replication ATP-dependent helicase DNA2 (EC 3.6.4.12)]
ruditapes_c20485	DNA repair	DNA metabolism	P	DNA replication ATP-dependent helicase/nuclease DNA2 [Includes: DNA replication nuclease DNA2 (EC 3.1.-.-); DNA replication ATP-dependent helicase DNA2 (EC 3.6.4.12)]
ruditapes_c20485	DNA replication	DNA metabolism	P	DNA replication ATP-dependent helicase/nuclease DNA2 [Includes: DNA replication nuclease DNA2 (EC 3.1.-.-); DNA replication ATP-dependent helicase DNA2 (EC 3.6.4.12)]
ruditapes_c20485	replicative cell aging	other biological processes	P	DNA replication ATP-dependent helicase/nuclease DNA2 [Includes: DNA replication nuclease DNA2 (EC 3.1.-.-); DNA replication ATP-dependent helicase DNA2 (EC 3.6.4.12)]
ruditapes_c27908	metabolic process	other metabolic processes	P	FAD synthase (EC 2.7.7.2) (FAD pyrophosphorylase) (FMN adenylyltransferase) (Flavin adenine dinucleotide synthase)
ruditapes_c27908	FAD biosynthetic process	other metabolic processes	P	FAD synthase (EC 2.7.7.2) (FAD pyrophosphorylase) (FMN adenylyltransferase) (Flavin adenine dinucleotide synthase)
ruditapes_c21677	"negative regulation of transcription from RNA polymerase II promoter, mitotic"	cell cycle and proliferation	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	"negative regulation of transcription from RNA polymerase II promoter, mitotic"	RNA metabolism	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	"negative regulation of transcription from RNA polymerase II promoter, mitotic"	cell organization and biogenesis	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	lipid particle organization	cell organization and biogenesis	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	"positive regulation of transcription from RNA polymerase II promoter, meiotic"	RNA metabolism	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	phosphatidylcholine biosynthetic process	other metabolic processes	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	chromatin modification	cell organization and biogenesis	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	positive regulation of meiosis	cell cycle and proliferation	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	"negative regulation of transcription from RNA polymerase II promoter, meiotic"	RNA metabolism	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	phosphatidylserine biosynthetic process	other metabolic processes	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	spore germination	other biological processes	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_c21677	pseudohyphal growth	other biological processes	P	Transcriptional regulatory protein UME6 (Negative transcriptional regulator of IME2) (Regulator of inducer of meiosis protein 16) (Unscheduled meiotic gene expression protein 6)
ruditapes_lrc33955	bioluminescence	other metabolic processes	P	Mitrocomin
ruditapes_c10417	extracellular matrix organization	cell organization and biogenesis	P	Collagen alpha-1(XVIII) chain [Cleaved into: Endostatin]
ruditapes_c10417	positive regulation of apoptosis	death	P	Collagen alpha-1(XVIII) chain [Cleaved into: Endostatin]
ruditapes_c10417	response to hydrostatic pressure	stress response	P	Collagen alpha-1(XVIII) chain [Cleaved into: Endostatin]
ruditapes_c10417	response to drug	other biological processes	P	Collagen alpha-1(XVIII) chain [Cleaved into: Endostatin]
ruditapes_c10417	cell adhesion	cell adhesion	P	Collagen alpha-1(XVIII) chain [Cleaved into: Endostatin]
ruditapes_c10417	endothelial cell morphogenesis	cell organization and biogenesis	P	Collagen alpha-1(XVIII) chain [Cleaved into: Endostatin]
ruditapes_c10417	positive regulation of cell migration	other biological processes	P	Collagen alpha-1(XVIII) chain [Cleaved into: Endostatin]
ruditapes_c10417	positive regulation of cell proliferation	cell cycle and proliferation	P	Collagen alpha-1(XVIII) chain [Cleaved into: Endostatin]
ruditapes_c10417	angiogenesis	developmental processes	P	Collagen alpha-1(XVIII) chain [Cleaved into: Endostatin]
ruditapes_c6936	metabolic process	other metabolic processes	P	"Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC 3.2.1.113) (Mannosidase alpha class 1A member 2) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB)"
ruditapes_c6936	alveolus development	developmental processes	P	"Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC 3.2.1.113) (Mannosidase alpha class 1A member 2) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB)"
ruditapes_c6936	glycoprotein metabolic process	other metabolic processes	P	"Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC 3.2.1.113) (Mannosidase alpha class 1A member 2) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB)"
ruditapes_c6936	respiratory gaseous exchange	other biological processes	P	"Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC 3.2.1.113) (Mannosidase alpha class 1A member 2) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB)"
ruditapes_c10637	protein amino acid N-linked glycosylation	protein metabolism	P	Mannan polymerase complexes subunit MNN9 (M-pol I subunit MNN9) (M-Pol II subunit MNN9)
ruditapes_c10637	cell wall mannoprotein biosynthetic process	other metabolic processes	P	Mannan polymerase complexes subunit MNN9 (M-pol I subunit MNN9) (M-Pol II subunit MNN9)
ruditapes_c9689	glycogen metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c9689	carbohydrate metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c9689	glycogen biosynthetic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c7161	glycogen metabolic process	other metabolic processes	P	Glycogen phosphorylase (EC 2.4.1.1)
ruditapes_c7161	carbohydrate metabolic process	other metabolic processes	P	Glycogen phosphorylase (EC 2.4.1.1)
ruditapes_c7161	metabolic process	other metabolic processes	P	Glycogen phosphorylase (EC 2.4.1.1)
ruditapes_c10628	glycogen biosynthetic process	other metabolic processes	P	Glycogen biosynthesis protein GlgD
ruditapes_c10628	biosynthetic process	other metabolic processes	P	Glycogen biosynthesis protein GlgD
ruditapes_c8324	mitochondrial genome maintenance	cell organization and biogenesis	P	Protein Mpv17
ruditapes_c8324	cellular response to reactive oxygen species	stress response	P	Protein Mpv17
ruditapes_c8324	sensory perception of sound	other biological processes	P	Protein Mpv17
ruditapes_c8324	glomerular basement membrane development	developmental processes	P	Protein Mpv17
ruditapes_c8324	glomerular basement membrane development	cell organization and biogenesis	P	Protein Mpv17
ruditapes_c8324	homeostatic process	other biological processes	P	Protein Mpv17
ruditapes_c8324	inner ear development	developmental processes	P	Protein Mpv17
ruditapes_c13768	carbohydrate transport	transport	P	L-galactonate transporter
ruditapes_c13768	transmembrane transport	transport	P	L-galactonate transporter
ruditapes_c13768	aldonate transport	transport	P	L-galactonate transporter
ruditapes_c13768	transport	transport	P	L-galactonate transporter
ruditapes_c31568	positive regulation of transcription factor activity	RNA metabolism	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	protein homotrimerization	cell organization and biogenesis	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	positive regulation of JUN kinase activity	signal transduction	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	positive regulation of JUN kinase activity	stress response	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	positive regulation of JUN kinase activity	protein metabolism	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	regulation of apoptosis	death	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	protein autoubiquitination	protein metabolism	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	protein catabolic process	protein metabolism	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	regulation of immunoglobulin secretion	transport	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	apoptosis	death	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	positive regulation of interleukin-2 production	other biological processes	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	activation of NF-kappaB-inducing kinase activity	signal transduction	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	positive regulation of T cell cytokine production	other biological processes	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	signal transduction	signal transduction	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	regulation of JNK cascade	signal transduction	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	regulation of JNK cascade	stress response	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	protein K63-linked ubiquitination	protein metabolism	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	anti-apoptosis	death	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	negative regulation of glial cell apoptosis	death	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	cellular protein complex assembly	cell organization and biogenesis	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c31568	tumor necrosis factor-mediated signaling pathway	signal transduction	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2)
ruditapes_c20295	phospholipid transport	transport	P	Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)
ruditapes_c20295	post-Golgi vesicle-mediated transport	transport	P	Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)
ruditapes_c20295	cation transport	transport	P	Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)
ruditapes_c20295	phospholipid translocation	transport	P	Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)
ruditapes_c20295	phospholipid translocation	cell organization and biogenesis	P	Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)
ruditapes_c20295	endocytosis	transport	P	Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)
ruditapes_c20295	endocytosis	cell organization and biogenesis	P	Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)
ruditapes_c20295	intracellular protein transport	transport	P	Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)
ruditapes_c20295	ribosomal small subunit assembly	cell organization and biogenesis	P	Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)
ruditapes_c29517	fatty acid biosynthetic process	other metabolic processes	P	Elongation of fatty acids protein 1 (EC 2.3.1.199) (3-keto acyl-CoA synthase ELO1) (Very-long-chain 3-oxoacyl-CoA synthase 1)
ruditapes_c29517	lipid biosynthetic process	other metabolic processes	P	Elongation of fatty acids protein 1 (EC 2.3.1.199) (3-keto acyl-CoA synthase ELO1) (Very-long-chain 3-oxoacyl-CoA synthase 1)
ruditapes_c29517	"fatty acid elongation, unsaturated fatty acid"	other metabolic processes	P	Elongation of fatty acids protein 1 (EC 2.3.1.199) (3-keto acyl-CoA synthase ELO1) (Very-long-chain 3-oxoacyl-CoA synthase 1)
ruditapes_c7737	protein transport	transport	P	Protein SOP4 (Suppressor of PMA1-7 protein 4)
ruditapes_c7737	transport	transport	P	Protein SOP4 (Suppressor of PMA1-7 protein 4)
ruditapes_c7737	ER to Golgi vesicle-mediated transport	transport	P	Protein SOP4 (Suppressor of PMA1-7 protein 4)
ruditapes_c28641	arginine metabolic process	other metabolic processes	P	Protein RocB
ruditapes_c28641	metabolic process	other metabolic processes	P	Protein RocB
ruditapes_c19394	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor MBP1 (MBF subunit p120)
ruditapes_c19394	regulation of transcription of G1/S-phase of mitotic cell cycle	cell cycle and proliferation	P	Transcription factor MBP1 (MBF subunit p120)
ruditapes_c19394	regulation of transcription of G1/S-phase of mitotic cell cycle	RNA metabolism	P	Transcription factor MBP1 (MBF subunit p120)
ruditapes_c19394	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor MBP1 (MBF subunit p120)
ruditapes_c19394	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor MBP1 (MBF subunit p120)
ruditapes_c19394	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor MBP1 (MBF subunit p120)
ruditapes_c21619	sporulation resulting in formation of a cellular spore	other biological processes	P	Oleate-activated transcription factor 1
ruditapes_c21619	"transcription, DNA-dependent"	RNA metabolism	P	Oleate-activated transcription factor 1
ruditapes_c21619	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Oleate-activated transcription factor 1
ruditapes_c21619	positive regulation of chromatin silencing at telomere	RNA metabolism	P	Oleate-activated transcription factor 1
ruditapes_c21619	positive regulation of chromatin silencing at telomere	cell organization and biogenesis	P	Oleate-activated transcription factor 1
ruditapes_c21619	positive regulation of fatty acid beta-oxidation	other metabolic processes	P	Oleate-activated transcription factor 1
ruditapes_c21619	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Oleate-activated transcription factor 1
ruditapes2_c1957	phosphorylation	other metabolic processes	P	Dual specificity mitogen-activated protein kinase kinase 3 (MAP kinase kinase 3) (MAPKK 3) (EC 2.7.12.2) (MAPK-ERK kinase 3) (Fragment)
ruditapes2_c1957	protein amino acid phosphorylation	protein metabolism	P	Dual specificity mitogen-activated protein kinase kinase 3 (MAP kinase kinase 3) (MAPKK 3) (EC 2.7.12.2) (MAPK-ERK kinase 3) (Fragment)
ruditapes_c16331	oxidation reduction	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c16331	cellular amino acid biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c16331	proline biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c16331	metabolic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c17871	plasma membrane fusion during cytogamy	cell organization and biogenesis	P	Profilin
ruditapes_c17871	actin filament polymerization	cell organization and biogenesis	P	Profilin
ruditapes_c17871	cytoskeleton organization	cell organization and biogenesis	P	Profilin
ruditapes_c17871	"cytokinesis, contractile ring formation"	cell cycle and proliferation	P	Profilin
ruditapes_c17871	"cytokinesis, contractile ring formation"	cell organization and biogenesis	P	Profilin
ruditapes_c17871	actin cytoskeleton organization	cell organization and biogenesis	P	Profilin
ruditapes2_c263	metabolic process	other metabolic processes	P	Plipastatin synthase subunit B (EC 2.3.1.-) (Peptide synthase 2) [Includes: ATP-dependent tyrosine adenylase 1 (TyrA 1) (Tyrosine activase 1); ATP-dependent threonine adenylase (ThrA) (Threonine activase)]
ruditapes2_c263	antibiotic biosynthetic process	other metabolic processes	P	Plipastatin synthase subunit B (EC 2.3.1.-) (Peptide synthase 2) [Includes: ATP-dependent tyrosine adenylase 1 (TyrA 1) (Tyrosine activase 1); ATP-dependent threonine adenylase (ThrA) (Threonine activase)]
ruditapes_c17715	response to DNA damage stimulus	stress response	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	telomere maintenance	DNA metabolism	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	telomere maintenance	cell organization and biogenesis	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	meiotic DNA double-strand break processing	stress response	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	meiotic DNA double-strand break processing	DNA metabolism	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	"gene conversion at mating-type locus, DNA double-strand break processing"	stress response	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	"gene conversion at mating-type locus, DNA double-strand break processing"	DNA metabolism	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	meiotic DNA double-strand break processing	cell cycle and proliferation	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	mismatch repair	DNA metabolism	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	telomeric 3' overhang formation	DNA metabolism	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	telomeric 3' overhang formation	cell organization and biogenesis	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	DNA double-strand break processing	stress response	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	DNA double-strand break processing	DNA metabolism	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	mismatch repair	stress response	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	DNA repair	stress response	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17715	DNA repair	DNA metabolism	P	Exodeoxyribonuclease 1 (EC 3.1.-.-) (Exodeoxyribonuclease I) (EXO I) (Exonuclease I) (Protein DHS1)
ruditapes_c17947	lung development	developmental processes	P	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein cux-1)
ruditapes_c17947	multicellular organismal development	developmental processes	P	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein cux-1)
ruditapes_c17947	auditory receptor cell differentiation	developmental processes	P	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein cux-1)
ruditapes_c17947	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein cux-1)
ruditapes_c17947	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein cux-1)
ruditapes_c17947	"retrograde transport, vesicle recycling within Golgi"	transport	P	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein cux-1)
ruditapes_c17947	"transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein cux-1)
ruditapes_c17947	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein cux-1)
ruditapes_c26275	cell division	other biological processes	P	DNA translocase FtsK
ruditapes_c26275	cell cycle	cell cycle and proliferation	P	DNA translocase FtsK
ruditapes_c26275	chromosome segregation	other biological processes	P	DNA translocase FtsK
ruditapes_c18978	phosphorylation	other metabolic processes	P	Osmosensing histidine protein kinase SLN1 (EC 2.7.13.3) (Osmolarity two-component system protein SLN1) (Tyrosine phosphatase-dependent protein 2)
ruditapes_c18978	negative regulation of protein kinase activity	other metabolic processes	P	Osmosensing histidine protein kinase SLN1 (EC 2.7.13.3) (Osmolarity two-component system protein SLN1) (Tyrosine phosphatase-dependent protein 2)
ruditapes_c18978	osmosensory signaling pathway via two-component system	signal transduction	P	Osmosensing histidine protein kinase SLN1 (EC 2.7.13.3) (Osmolarity two-component system protein SLN1) (Tyrosine phosphatase-dependent protein 2)
ruditapes_c18978	osmosensory signaling pathway via two-component system	stress response	P	Osmosensing histidine protein kinase SLN1 (EC 2.7.13.3) (Osmolarity two-component system protein SLN1) (Tyrosine phosphatase-dependent protein 2)
ruditapes_c18978	signal transduction	signal transduction	P	Osmosensing histidine protein kinase SLN1 (EC 2.7.13.3) (Osmolarity two-component system protein SLN1) (Tyrosine phosphatase-dependent protein 2)
ruditapes_c18978	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Osmosensing histidine protein kinase SLN1 (EC 2.7.13.3) (Osmolarity two-component system protein SLN1) (Tyrosine phosphatase-dependent protein 2)
ruditapes_c18978	protein amino acid autophosphorylation	protein metabolism	P	Osmosensing histidine protein kinase SLN1 (EC 2.7.13.3) (Osmolarity two-component system protein SLN1) (Tyrosine phosphatase-dependent protein 2)
ruditapes_c18978	peptidyl-histidine phosphorylation	protein metabolism	P	Osmosensing histidine protein kinase SLN1 (EC 2.7.13.3) (Osmolarity two-component system protein SLN1) (Tyrosine phosphatase-dependent protein 2)
ruditapes_c18978	two-component signal transduction system (phosphorelay)	signal transduction	P	Osmosensing histidine protein kinase SLN1 (EC 2.7.13.3) (Osmolarity two-component system protein SLN1) (Tyrosine phosphatase-dependent protein 2)
ruditapes_lrc33698	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_lrc33698	selenocysteine metabolic process	other metabolic processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_lrc33698	methionine metabolic process	other metabolic processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c26489	regulation of small GTPase mediated signal transduction	signal transduction	P	GTPase-activating protein BEM2/IPL2 (Bud emergence protein 2)
ruditapes_c26489	actin cytoskeleton organization	cell organization and biogenesis	P	GTPase-activating protein BEM2/IPL2 (Bud emergence protein 2)
ruditapes_c26489	small GTPase mediated signal transduction	signal transduction	P	GTPase-activating protein BEM2/IPL2 (Bud emergence protein 2)
ruditapes_c26489	establishment of cell polarity	cell organization and biogenesis	P	GTPase-activating protein BEM2/IPL2 (Bud emergence protein 2)
ruditapes_c26489	signal transduction	signal transduction	P	GTPase-activating protein BEM2/IPL2 (Bud emergence protein 2)
ruditapes_c26489	positive regulation of Rho GTPase activity	signal transduction	P	GTPase-activating protein BEM2/IPL2 (Bud emergence protein 2)
ruditapes_c26489	negative regulation of Rho protein signal transduction	signal transduction	P	GTPase-activating protein BEM2/IPL2 (Bud emergence protein 2)
ruditapes_c26489	positive regulation of GTPase activity	other biological processes	P	GTPase-activating protein BEM2/IPL2 (Bud emergence protein 2)
ruditapes_c26489	fungal-type cell wall organization	cell organization and biogenesis	P	GTPase-activating protein BEM2/IPL2 (Bud emergence protein 2)
ruditapes_c28201	DNA replication	DNA metabolism	P	DNA polymerase V (POL V) (EC 2.7.7.7)
ruditapes_c28201	rRNA transcription	RNA metabolism	P	DNA polymerase V (POL V) (EC 2.7.7.7)
ruditapes_c28201	"transcription, DNA-dependent"	RNA metabolism	P	DNA polymerase V (POL V) (EC 2.7.7.7)
ruditapes_c28201	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase V (POL V) (EC 2.7.7.7)
ruditapes_c20418	biological_process	other biological processes	P	Uncharacterized protein YEL025C
ruditapes_c24152	biological_process	other biological processes	P	Uncharacterized protein YEL023C
ruditapes_c16675	regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion	signal transduction	P	Protein DSE1 (Daughter-specific expression protein 1)
ruditapes_c16675	invasive growth in response to glucose limitation	other biological processes	P	Protein DSE1 (Daughter-specific expression protein 1)
ruditapes_c16675	cell division	other biological processes	P	Protein DSE1 (Daughter-specific expression protein 1)
ruditapes_c16675	"cytokinesis, completion of separation"	other biological processes	P	Protein DSE1 (Daughter-specific expression protein 1)
ruditapes_c16675	cell cycle	cell cycle and proliferation	P	Protein DSE1 (Daughter-specific expression protein 1)
ruditapes_c16675	cell wall organization	cell organization and biogenesis	P	Protein DSE1 (Daughter-specific expression protein 1)
ruditapes_c22031	cyclic nucleotide biosynthetic process	other metabolic processes	P	Adenylate cyclase type 5 (EC 4.6.1.1) (ATP pyrophosphate-lyase 5) (Adenylate cyclase type V) (Adenylyl cyclase 5)
ruditapes_c22031	cAMP biosynthetic process	other metabolic processes	P	Adenylate cyclase type 5 (EC 4.6.1.1) (ATP pyrophosphate-lyase 5) (Adenylate cyclase type V) (Adenylyl cyclase 5)
ruditapes_c28674	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	cAMP biosynthetic process	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	activation of phospholipase C activity	other biological processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	nerve growth factor receptor signaling pathway	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	signal transduction	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	transmembrane transport	transport	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	signal transduction	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	nerve growth factor receptor signaling pathway	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	activation of phospholipase C activity	other biological processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	transmembrane transport	transport	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	fibroblast growth factor receptor signaling pathway	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	cAMP biosynthetic process	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	inhibition of adenylate cyclase activity by G-protein signaling	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	inhibition of adenylate cyclase activity by G-protein signaling	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	cAMP-mediated signaling	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	water transport	transport	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	learning or memory	other biological processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	cyclic nucleotide biosynthetic process	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	epidermal growth factor receptor signaling pathway	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	synaptic transmission	cell-cell signaling	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	epidermal growth factor receptor signaling pathway	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	activation of protein kinase A activity	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	synaptic transmission	cell-cell signaling	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	cyclic nucleotide biosynthetic process	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	learning or memory	other biological processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	GTP catabolic process	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	fibroblast growth factor receptor signaling pathway	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	inhibition of adenylate cyclase activity by G-protein signaling	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	inhibition of adenylate cyclase activity by G-protein signaling	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	cAMP-mediated signaling	signal transduction	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	GTP catabolic process	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	activation of protein kinase A activity	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c9734	energy reserve metabolic process	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	energy reserve metabolic process	other metabolic processes	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c28674	water transport	transport	P	Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (AC8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
ruditapes_c13699	oxalate catabolic process	other metabolic processes	P	Oxalyl-CoA decarboxylase (EC 4.1.1.8)
ruditapes_c8608	biological_process	other biological processes	P	Uncharacterized protein YNL208W
ruditapes_lrc8487	activation of caspase activity	death	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_lrc34186	cytokine-mediated signaling pathway	signal transduction	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_lrc34186	type I interferon-mediated signaling pathway	signal transduction	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_lrc34186	induction of apoptosis by extracellular signals	death	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_lrc34186	activation of pro-apoptotic gene products	death	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_lrc8487	cytokine-mediated signaling pathway	signal transduction	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_lrc8487	activation of pro-apoptotic gene products	death	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_lrc8487	induction of apoptosis by extracellular signals	death	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_lrc8487	type I interferon-mediated signaling pathway	signal transduction	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_lrc34186	apoptosis	death	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_lrc34186	activation of caspase activity	death	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_lrc8487	apoptosis	death	P	"Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a))"
ruditapes_c13607	digestion	other biological processes	P	Chymotrypsin-like protease CTRL-1 (EC 3.4.21.-)
ruditapes_c13607	proteolysis	protein metabolism	P	Chymotrypsin-like protease CTRL-1 (EC 3.4.21.-)
ruditapes_c23098	GPI anchor biosynthetic process	protein metabolism	P	GPI ethanolamine phosphate transferase 2 (EC 2.-.-.-) (Glycosylphosphatidylinositol-anchor biosynthesis protein 7) (Local anestheticum-sensitive protein 21)
ruditapes_c23098	metabolic process	other metabolic processes	P	GPI ethanolamine phosphate transferase 2 (EC 2.-.-.-) (Glycosylphosphatidylinositol-anchor biosynthesis protein 7) (Local anestheticum-sensitive protein 21)
ruditapes_lrc32306	mRNA catabolic process	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_s38980	mRNA catabolic process	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc4857	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc4857	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc4857	rRNA processing	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc4315	mRNA catabolic process	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_lrc35075	mRNA catabolic process	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc1631	karyogamy	cell organization and biogenesis	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_lrc32306	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc4315	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_s38980	rRNA processing	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_lrc32306	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_s38980	karyogamy	cell organization and biogenesis	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc4315	karyogamy	cell organization and biogenesis	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc1631	rRNA processing	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc1631	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_lrc35075	rRNA processing	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc4315	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_lrc32306	karyogamy	cell organization and biogenesis	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_s38980	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_lrc32306	rRNA processing	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_lrc35075	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc1631	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc4315	rRNA processing	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_lrc35075	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_s38980	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_lrc35075	karyogamy	cell organization and biogenesis	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc1631	mRNA catabolic process	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc4857	karyogamy	cell organization and biogenesis	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes2_lrc4857	mRNA catabolic process	RNA metabolism	P	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Exonuclease 2) (Exonuclease II) (Exo II) (p140)
ruditapes_c3584	metabolic process	other metabolic processes	P	Uncharacterized oxidoreductase YhxC (EC 1.-.-.-) (ORFX)
ruditapes_c3584	oxidation reduction	other metabolic processes	P	Uncharacterized oxidoreductase YhxC (EC 1.-.-.-) (ORFX)
ruditapes_c2149	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional activator Btr (Bacillibactin transport regulator)
ruditapes_c2149	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional activator Btr (Bacillibactin transport regulator)
ruditapes_lrc32357	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	viral transcription	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	translational termination	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	translational termination	cell organization and biogenesis	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	viral infectious cycle	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	gene expression	other metabolic processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	translational termination	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	translational termination	cell organization and biogenesis	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	translation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	translational elongation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	viral transcription	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	viral reproduction	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	gene expression	other metabolic processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	viral reproduction	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	translational elongation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	translation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	translational elongation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	viral infectious cycle	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	viral reproduction	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	translational termination	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	translational termination	cell organization and biogenesis	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	translation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	gene expression	other metabolic processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	viral infectious cycle	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	translational elongation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	translational termination	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	translational termination	cell organization and biogenesis	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	viral reproduction	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	viral transcription	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	translational initiation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	viral infectious cycle	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	translational initiation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	viral transcription	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	translational initiation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	viral infectious cycle	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	viral transcription	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	gene expression	other metabolic processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	viral reproduction	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	viral reproduction	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	translational termination	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	translational termination	cell organization and biogenesis	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	translational termination	cell organization and biogenesis	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	translation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	translation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	viral reproduction	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	translational elongation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	gene expression	other metabolic processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	translation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	translational termination	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	translational initiation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	gene expression	other metabolic processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	viral transcription	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	translational elongation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	translational termination	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	translational termination	cell organization and biogenesis	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	viral infectious cycle	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32357	translational initiation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	viral infectious cycle	other biological processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	translational initiation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	gene expression	other metabolic processes	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	translational elongation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35650	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc4394	translation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32109	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc35863	translational initiation	protein metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_lrc32276	viral transcription	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes2_lrc5135	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L13a (23 kDa highly basic protein)
ruditapes_s32648	biological_process	other biological processes	P	Putative uncharacterized protein YIL169C
ruditapes_s32648	signal transduction	signal transduction	P	Putative uncharacterized protein YIL169C
ruditapes2_c5372	proteolysis	protein metabolism	P	Protein TMA108 (EC 3.4.11.-) (108 kDa translation machinery-associated protein)
ruditapes2_c5372	ribosome biogenesis	other biological processes	P	Protein TMA108 (EC 3.4.11.-) (108 kDa translation machinery-associated protein)
ruditapes_c11277	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Fork head protein homolog 1
ruditapes_c11277	negative regulation of transcription during G1 phase of mitotic cell cycle	cell cycle and proliferation	P	Fork head protein homolog 1
ruditapes_c11277	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Fork head protein homolog 1
ruditapes_c11277	chromatin remodeling	cell organization and biogenesis	P	Fork head protein homolog 1
ruditapes_c11277	mitochondrion organization	cell organization and biogenesis	P	Fork head protein homolog 1
ruditapes_c11277	regulation of transcription factor activity	RNA metabolism	P	Fork head protein homolog 1
ruditapes_c11277	termination of RNA polymerase II transcription	RNA metabolism	P	Fork head protein homolog 1
ruditapes_c11277	termination of RNA polymerase II transcription	cell organization and biogenesis	P	Fork head protein homolog 1
ruditapes_c11277	donor selection	DNA metabolism	P	Fork head protein homolog 1
ruditapes_c11277	mRNA 3'-end processing	RNA metabolism	P	Fork head protein homolog 1
ruditapes_c11277	negative regulation of RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Fork head protein homolog 1
ruditapes_c11277	negative regulation of transcription during G1 phase of mitotic cell cycle	RNA metabolism	P	Fork head protein homolog 1
ruditapes_c11277	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Fork head protein homolog 1
ruditapes_c12203	transmembrane transport	transport	P	Mitochondrial outer membrane protein porin 2 (Voltage-dependent anion-selective channel protein 2) (VDAC-2)
ruditapes_c12203	regulation of anion transport	transport	P	Mitochondrial outer membrane protein porin 2 (Voltage-dependent anion-selective channel protein 2) (VDAC-2)
ruditapes_c12203	cell redox homeostasis	other biological processes	P	Mitochondrial outer membrane protein porin 2 (Voltage-dependent anion-selective channel protein 2) (VDAC-2)
ruditapes_c12203	ion transport	transport	P	Mitochondrial outer membrane protein porin 2 (Voltage-dependent anion-selective channel protein 2) (VDAC-2)
ruditapes_c12203	transport	transport	P	Mitochondrial outer membrane protein porin 2 (Voltage-dependent anion-selective channel protein 2) (VDAC-2)
ruditapes_c12203	anion transport	transport	P	Mitochondrial outer membrane protein porin 2 (Voltage-dependent anion-selective channel protein 2) (VDAC-2)
ruditapes_c12203	DNA transport	transport	P	Mitochondrial outer membrane protein porin 2 (Voltage-dependent anion-selective channel protein 2) (VDAC-2)
ruditapes2_c2054	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor XBP1 (XhoI site-binding protein 1)
ruditapes2_c2054	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor XBP1 (XhoI site-binding protein 1)
ruditapes_c27758	response to stress	stress response	P	Transcriptional repressor XBP1 (XhoI site-binding protein 1)
ruditapes_c27758	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor XBP1 (XhoI site-binding protein 1)
ruditapes2_c2054	response to stress	stress response	P	Transcriptional repressor XBP1 (XhoI site-binding protein 1)
ruditapes_c27758	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor XBP1 (XhoI site-binding protein 1)
ruditapes_lrc6869	dolichol metabolic process	other metabolic processes	P	Polyprenol reductase (EC 1.3.1.94) (Protein DFG10)
ruditapes_lrc6869	lipid metabolic process	other metabolic processes	P	Polyprenol reductase (EC 1.3.1.94) (Protein DFG10)
ruditapes_lrc6869	pseudohyphal growth	other biological processes	P	Polyprenol reductase (EC 1.3.1.94) (Protein DFG10)
ruditapes_lrc6869	oxidation reduction	other metabolic processes	P	Polyprenol reductase (EC 1.3.1.94) (Protein DFG10)
ruditapes_lrc6869	polyprenol catabolic process	other metabolic processes	P	Polyprenol reductase (EC 1.3.1.94) (Protein DFG10)
ruditapes_lrc6869	dolichol-linked oligosaccharide biosynthetic process	protein metabolism	P	Polyprenol reductase (EC 1.3.1.94) (Protein DFG10)
ruditapes_lrc6869	dolichol biosynthetic process	other metabolic processes	P	Polyprenol reductase (EC 1.3.1.94) (Protein DFG10)
ruditapes_c18194	metal ion transport	transport	P	Zinc transporter YKE4
ruditapes_c18194	ion transport	transport	P	Zinc transporter YKE4
ruditapes_c18194	transport	transport	P	Zinc transporter YKE4
ruditapes_c18194	transmembrane transport	transport	P	Zinc transporter YKE4
ruditapes_c18194	zinc ion transport	transport	P	Zinc transporter YKE4
ruditapes_c25201	transport	transport	P	ATP-dependent permease PDR11
ruditapes_c25201	ATP catabolic process	other metabolic processes	P	ATP-dependent permease PDR11
ruditapes_c25201	sterol transport	transport	P	ATP-dependent permease PDR11
ruditapes_c8056	protein retention in ER lumen	other biological processes	P	ER-retained PMA1-suppressing protein 1 (EC 5.3.4.1)
ruditapes_c8056	cell redox homeostasis	other biological processes	P	ER-retained PMA1-suppressing protein 1 (EC 5.3.4.1)
ruditapes_c8056	ER-associated protein catabolic process	protein metabolism	P	ER-retained PMA1-suppressing protein 1 (EC 5.3.4.1)
ruditapes_c26671	ion transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes_c26671	transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes_c26671	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes_c26671	proton transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes_lrc28988	"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	Ribosome biogenesis protein RLP7 (Ribosomal protein L7-like)
ruditapes_lrc28988	ribosomal large subunit biogenesis	other biological processes	P	Ribosome biogenesis protein RLP7 (Ribosomal protein L7-like)
ruditapes_lrc28988	translation	protein metabolism	P	Ribosome biogenesis protein RLP7 (Ribosomal protein L7-like)
ruditapes_lrc28988	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein RLP7 (Ribosomal protein L7-like)
ruditapes_lrc28988	"exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	Ribosome biogenesis protein RLP7 (Ribosomal protein L7-like)
ruditapes_c29036	transport	transport	P	Surface presentation of antigens protein SpaS
ruditapes_c29036	pathogenesis	other biological processes	P	Surface presentation of antigens protein SpaS
ruditapes_c29036	protein secretion	transport	P	Surface presentation of antigens protein SpaS
ruditapes_c17399	generation of precursor metabolites and energy	other metabolic processes	P	"Fumarate hydratase class I, aerobic (Fumarase) (EC 4.2.1.2)"
ruditapes_c17399	tricarboxylic acid cycle	other metabolic processes	P	"Fumarate hydratase class I, aerobic (Fumarase) (EC 4.2.1.2)"
ruditapes_c9015	tricarboxylic acid cycle	other metabolic processes	P	"Fumarate hydratase class I, aerobic (Fumarase) (EC 4.2.1.2)"
ruditapes_c9015	generation of precursor metabolites and energy	other metabolic processes	P	"Fumarate hydratase class I, aerobic (Fumarase) (EC 4.2.1.2)"
ruditapes_c18460	negative regulation of lamellipodium assembly	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	actin filament organization	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	glial cell migration	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	morphogenesis of larval imaginal disc epithelium	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	regulation of axonogenesis	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	regulation of axonogenesis	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	rhabdomere development	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	imaginal disc-derived wing hair site selection	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	imaginal disc-derived wing hair site selection	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	axon extension	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	axon extension	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	myoblast fusion	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	"phagocytosis, engulfment"	transport	P	Ras-related protein Rac1
ruditapes_c18460	"phagocytosis, engulfment"	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	rhabdomere development	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	lamellipodium assembly	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	myoblast fusion	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	"tracheal outgrowth, open tracheal system"	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	"dorsal closure, elongation of leading edge cells"	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	"dorsal closure, elongation of leading edge cells"	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	dorsal appendage formation	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	head involution	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	border follicle cell migration	other biological processes	P	Ras-related protein Rac1
ruditapes_c18460	ventral cord development	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	hemocyte migration	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	open tracheal system development	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	regulation of dendrite morphogenesis	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	cell-cell junction organization	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	dorsal closure	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	muscle fiber development	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	ovarian follicle cell development	other biological processes	P	Ras-related protein Rac1
ruditapes_c18460	microtubule-based process	other biological processes	P	Ras-related protein Rac1
ruditapes_c18460	regulation of dendrite morphogenesis	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rac1
ruditapes_c18460	GTP catabolic process	other metabolic processes	P	Ras-related protein Rac1
ruditapes_c18460	actin cytoskeleton organization	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	dendrite morphogenesis	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	JNK cascade	signal transduction	P	Ras-related protein Rac1
ruditapes_c18460	JNK cascade	stress response	P	Ras-related protein Rac1
ruditapes_c18460	germ-band shortening	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	dendrite morphogenesis	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	cell proliferation	cell cycle and proliferation	P	Ras-related protein Rac1
ruditapes_c18460	establishment of tissue polarity	other biological processes	P	Ras-related protein Rac1
ruditapes_c18460	peripheral nervous system development	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	establishment of ommatidial polarity	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	establishment of ommatidial polarity	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	regulation of synapse organization	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	regulation of synapse organization	cell-cell signaling	P	Ras-related protein Rac1
ruditapes_c18460	axon guidance	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	axon guidance	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	axonal fasciculation	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	mesodermal cell migration	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	"dorsal closure, amnioserosa morphology change"	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	salivary gland morphogenesis	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	phagocytosis triggered by activation of immune response cell surface activating receptor	transport	P	Ras-related protein Rac1
ruditapes_c18460	phagocytosis triggered by activation of immune response cell surface activating receptor	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	axonal fasciculation	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	regulation of synaptogenesis	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	regulation of synaptogenesis	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	regulation of synaptogenesis	cell-cell signaling	P	Ras-related protein Rac1
ruditapes_c18460	myoblast proliferation	cell cycle and proliferation	P	Ras-related protein Rac1
ruditapes_c18460	multicellular organismal development	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	actin filament bundle formation	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	neuron projection development	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	neuron projection development	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	regulation of hemocyte differentiation	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	response to DNA damage stimulus	stress response	P	Ras-related protein Rac1
ruditapes_c18460	adherens junction maintenance	cell organization and biogenesis	P	Ras-related protein Rac1
ruditapes_c18460	cell competition in a multicellular organism	developmental processes	P	Ras-related protein Rac1
ruditapes_c18460	hemocyte development	developmental processes	P	Ras-related protein Rac1
ruditapes_c26944	antibiotic biosynthetic process	other metabolic processes	P	Polyketide synthase PksJ (PKS)
ruditapes_c26944	biosynthetic process	other metabolic processes	P	Polyketide synthase PksJ (PKS)
ruditapes_c26944	metabolic process	other metabolic processes	P	Polyketide synthase PksJ (PKS)
ruditapes2_c950	tetrahydrofolate metabolic process	other metabolic processes	P	Monomeric sarcosine oxidase (MSOX) (EC 1.5.3.1)
ruditapes2_c950	oxidation reduction	other metabolic processes	P	Monomeric sarcosine oxidase (MSOX) (EC 1.5.3.1)
ruditapes_c16974	metabolic process	other metabolic processes	P	Polyketide synthase PksM
ruditapes_c16974	biosynthetic process	other metabolic processes	P	Polyketide synthase PksM
ruditapes_c16974	antibiotic biosynthetic process	other metabolic processes	P	Polyketide synthase PksM
ruditapes_c23949	sulfur metabolic process	other metabolic processes	P	Oligopeptide transporter 1 (High affinity glutathione transporter 1)
ruditapes_c23949	transmembrane transport	transport	P	Oligopeptide transporter 1 (High affinity glutathione transporter 1)
ruditapes_c23949	transport	transport	P	Oligopeptide transporter 1 (High affinity glutathione transporter 1)
ruditapes_c23949	oligopeptide transport	transport	P	Oligopeptide transporter 1 (High affinity glutathione transporter 1)
ruditapes_c23949	protein transport	transport	P	Oligopeptide transporter 1 (High affinity glutathione transporter 1)
ruditapes_c23949	peptide transport	transport	P	Oligopeptide transporter 1 (High affinity glutathione transporter 1)
ruditapes_c10479	"regulation of transcription, DNA-dependent"	RNA metabolism	P	AP-1-like transcription factor YAP4 (Chromosome instability protein 5) (Transcription activator CIN5)
ruditapes_c10479	response to drug	other biological processes	P	AP-1-like transcription factor YAP4 (Chromosome instability protein 5) (Transcription activator CIN5)
ruditapes_c10479	hyperosmotic response	stress response	P	AP-1-like transcription factor YAP4 (Chromosome instability protein 5) (Transcription activator CIN5)
ruditapes_c10479	hyperosmotic salinity response	stress response	P	AP-1-like transcription factor YAP4 (Chromosome instability protein 5) (Transcription activator CIN5)
ruditapes_c10479	"transcription, DNA-dependent"	RNA metabolism	P	AP-1-like transcription factor YAP4 (Chromosome instability protein 5) (Transcription activator CIN5)
ruditapes_c452	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase) (Diiodophenylpyruvate reductase) (EC 1.1.1.96)"
ruditapes_c452	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase) (Diiodophenylpyruvate reductase) (EC 1.1.1.96)"
ruditapes_c452	gluconeogenesis	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase) (Diiodophenylpyruvate reductase) (EC 1.1.1.96)"
ruditapes_c452	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase) (Diiodophenylpyruvate reductase) (EC 1.1.1.96)"
ruditapes_c452	glucose metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase) (Diiodophenylpyruvate reductase) (EC 1.1.1.96)"
ruditapes_c452	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase) (Diiodophenylpyruvate reductase) (EC 1.1.1.96)"
ruditapes_c452	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase) (Diiodophenylpyruvate reductase) (EC 1.1.1.96)"
ruditapes_c18346	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes_c18346	internal protein amino acid acetylation	protein metabolism	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes_c18346	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes_c18346	oxaloacetate metabolic process	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes_c18346	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes_c18346	glucose metabolic process	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes_c18346	NADH metabolic process	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes_c18346	gluconeogenesis	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes_c18346	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes_c18346	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes_c23677	cellular lipid metabolic process	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (78 kDa gastrin-binding protein) (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c23677	fatty acid metabolic process	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (78 kDa gastrin-binding protein) (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c23677	metabolic process	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (78 kDa gastrin-binding protein) (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c23677	lipid metabolic process	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (78 kDa gastrin-binding protein) (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c23677	fatty acid beta-oxidation	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (78 kDa gastrin-binding protein) (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c23677	response to drug	other biological processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (78 kDa gastrin-binding protein) (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c23677	oxidation reduction	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (78 kDa gastrin-binding protein) (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c23677	response to insulin stimulus	other biological processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (78 kDa gastrin-binding protein) (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c8663	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor 3
ruditapes_c8663	spermatogenesis	other biological processes	P	ADP-ribosylation factor 3
ruditapes_c8663	endosome transport	transport	P	ADP-ribosylation factor 3
ruditapes_c8663	neurotransmitter secretion	transport	P	ADP-ribosylation factor 3
ruditapes_c8663	neurotransmitter secretion	cell-cell signaling	P	ADP-ribosylation factor 3
ruditapes_c8663	vesicle-mediated transport	transport	P	ADP-ribosylation factor 3
ruditapes_c8663	synaptic vesicle endocytosis	cell organization and biogenesis	P	ADP-ribosylation factor 3
ruditapes_c8663	transport	transport	P	ADP-ribosylation factor 3
ruditapes_c8663	male meiosis cytokinesis	cell cycle and proliferation	P	ADP-ribosylation factor 3
ruditapes_c8663	protein amino acid ADP-ribosylation	protein metabolism	P	ADP-ribosylation factor 3
ruditapes_c8663	myoblast fusion	developmental processes	P	ADP-ribosylation factor 3
ruditapes_c8663	myoblast fusion	cell organization and biogenesis	P	ADP-ribosylation factor 3
ruditapes_c8663	protein transport	transport	P	ADP-ribosylation factor 3
ruditapes_c8663	synaptic vesicle endocytosis	transport	P	ADP-ribosylation factor 3
ruditapes_c7155	protein transport	transport	P	Sorting nexin MVP1
ruditapes_c7155	transport	transport	P	Sorting nexin MVP1
ruditapes_c7155	cell communication	other biological processes	P	Sorting nexin MVP1
ruditapes_c7155	protein targeting to vacuole	transport	P	Sorting nexin MVP1
ruditapes_c28157	melanin biosynthetic process	other metabolic processes	P	Melanocyte protein PMEL (ME20-M) (ME20M) (Melanocyte protein Pmel 17) (Melanocytes lineage-specific antigen GP100) (Melanoma-associated ME20 antigen) (P1) (P100) (Premelanosome protein) (Silver locus protein homolog) [Cleaved into: M-alpha (95 kDa melanocyte-specific secreted glycoprotein) (P26) (Secreted melanoma-associated ME20 antigen) (ME20-S) (ME20S); M-beta]
ruditapes_c28157	melanosome organization	cell organization and biogenesis	P	Melanocyte protein PMEL (ME20-M) (ME20M) (Melanocyte protein Pmel 17) (Melanocytes lineage-specific antigen GP100) (Melanoma-associated ME20 antigen) (P1) (P100) (Premelanosome protein) (Silver locus protein homolog) [Cleaved into: M-alpha (95 kDa melanocyte-specific secreted glycoprotein) (P26) (Secreted melanoma-associated ME20 antigen) (ME20-S) (ME20S); M-beta]
ruditapes_c8310	sporulation resulting in formation of a cellular spore	other biological processes	P	"1,3-beta-glucan synthase component GSC2 (EC 2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase) (FK506 sensitivity protein 2) (Glucan synthase of cerevisiae protein 2)"
ruditapes_c8310	cell wall organization	cell organization and biogenesis	P	"1,3-beta-glucan synthase component GSC2 (EC 2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase) (FK506 sensitivity protein 2) (Glucan synthase of cerevisiae protein 2)"
ruditapes_c8310	regulation of cell shape	cell organization and biogenesis	P	"1,3-beta-glucan synthase component GSC2 (EC 2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase) (FK506 sensitivity protein 2) (Glucan synthase of cerevisiae protein 2)"
ruditapes_c8310	ascospore wall assembly	cell organization and biogenesis	P	"1,3-beta-glucan synthase component GSC2 (EC 2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase) (FK506 sensitivity protein 2) (Glucan synthase of cerevisiae protein 2)"
ruditapes_c8310	"1,3-beta-glucan biosynthetic process"	other metabolic processes	P	"1,3-beta-glucan synthase component GSC2 (EC 2.4.1.34) (1,3-beta-D-glucan-UDP glucosyltransferase) (FK506 sensitivity protein 2) (Glucan synthase of cerevisiae protein 2)"
ruditapes_c26106	protein insertion into mitochondrial membrane from inner side	cell organization and biogenesis	P	"Protein MSS2, mitochondrial"
ruditapes2_c245	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S4
ruditapes2_c245	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S4
ruditapes2_c245	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S4
ruditapes2_c245	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S4
ruditapes2_c245	translation	protein metabolism	P	40S ribosomal protein S4
ruditapes2_c1614	translation	protein metabolism	P	60S ribosomal protein L28
ruditapes_lrc39139	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc38209	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes2_lrc5258	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_s40223	translation	protein metabolism	P	60S ribosomal protein L13-1 (Cold-induced protein C24A)
ruditapes_c19651	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Heat shock factor protein HSF30 (Heat shock transcription factor 30) (HSTF 30) (Heat stress transcription factor)
ruditapes_c19651	response to stress	stress response	P	Heat shock factor protein HSF30 (Heat shock transcription factor 30) (HSTF 30) (Heat stress transcription factor)
ruditapes_c19651	"transcription, DNA-dependent"	RNA metabolism	P	Heat shock factor protein HSF30 (Heat shock transcription factor 30) (HSTF 30) (Heat stress transcription factor)
ruditapes_c17757	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Retroviral integration site protein Fli-1 homolog
ruditapes_c17757	"transcription, DNA-dependent"	RNA metabolism	P	Retroviral integration site protein Fli-1 homolog
ruditapes_c29824	transport	transport	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c29824	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c29824	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c29824	response to steroid hormone stimulus	other biological processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c29824	regulation of intracellular cholesterol transport	transport	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c29824	cholesterol homeostasis	other biological processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c12565	epidermal growth factor receptor signaling pathway	signal transduction	P	Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-Src kinase) (Protein-tyrosine kinase CYL)
ruditapes_c12565	platelet activation	stress response	P	Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-Src kinase) (Protein-tyrosine kinase CYL)
ruditapes_c12565	blood coagulation	stress response	P	Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-Src kinase) (Protein-tyrosine kinase CYL)
ruditapes_c12565	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-Src kinase) (Protein-tyrosine kinase CYL)
ruditapes_c12565	negative regulation of cell proliferation	cell cycle and proliferation	P	Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-Src kinase) (Protein-tyrosine kinase CYL)
ruditapes_c12565	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-Src kinase) (Protein-tyrosine kinase CYL)
ruditapes_c12565	T cell costimulation	other biological processes	P	Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-Src kinase) (Protein-tyrosine kinase CYL)
ruditapes_c12565	T cell receptor signaling pathway	signal transduction	P	Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-Src kinase) (Protein-tyrosine kinase CYL)
ruditapes_lrc10963	tRNA aminoacylation for protein translation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes_lrc10963	tRNA aminoacylation for protein translation	RNA metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes_c13470	isoleucyl-tRNA aminoacylation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes_c13470	isoleucyl-tRNA aminoacylation	RNA metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes_c13470	tRNA aminoacylation for protein translation	RNA metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes_lrc10963	gene expression	other metabolic processes	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes_lrc10963	translation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes_lrc10963	isoleucyl-tRNA aminoacylation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes_lrc10963	isoleucyl-tRNA aminoacylation	RNA metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes_c13470	translation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes_c13470	gene expression	other metabolic processes	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes_c13470	tRNA aminoacylation for protein translation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes2_c297	transport	transport	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	response to retinoic acid	other biological processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	male gonad development	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	gluconeogenesis	other metabolic processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	retinol metabolic process	other metabolic processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	positive regulation of insulin secretion	transport	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	uterus development	other biological processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	protein complex assembly	cell organization and biogenesis	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	embryonic organ morphogenesis	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	glucose homeostasis	other biological processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	response to virus	other biological processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	detection of light stimulus involved in visual perception	other biological processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	response to estrogen stimulus	other biological processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	female genitalia morphogenesis	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	heart trabecula formation	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	urinary bladder development	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	spermatogenesis	other biological processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	retinal metabolic process	other metabolic processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	maintenance of gastrointestinal epithelium	other biological processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	transmembrane transport	transport	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	retina development in camera-type eye	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	response to vitamin A	other biological processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	retinol transport	transport	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	vagina development	other biological processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	cardiac muscle tissue development	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	embryonic development	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	positive regulation of immunoglobulin secretion	transport	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	response to insulin stimulus	other biological processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	lung development	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	negative regulation of cardiac muscle cell proliferation	cell cycle and proliferation	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	negative regulation of cardiac muscle cell proliferation	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	eye development	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	positive regulation of insulin secretion	cell-cell signaling	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	embryonic skeletal system development	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	embryonic retina morphogenesis in camera-type eye	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	heart development	developmental processes	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes2_c297	oocyte growth	cell organization and biogenesis	P	Retinol-binding protein 4 (Plasma retinol-binding protein) (PRBP) (RBP)
ruditapes_lrc23189	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase kinase kinase 8 (EC 2.7.11.25) (Cancer Osaka thyroid oncogene) (Proto-oncogene c-Cot) (Serine/threonine-protein kinase cot) (Tumor progression locus 2) (TPL-2)
ruditapes_lrc23189	signal transduction	signal transduction	P	Mitogen-activated protein kinase kinase kinase 8 (EC 2.7.11.25) (Cancer Osaka thyroid oncogene) (Proto-oncogene c-Cot) (Serine/threonine-protein kinase cot) (Tumor progression locus 2) (TPL-2)
ruditapes_lrc23189	cell cycle	cell cycle and proliferation	P	Mitogen-activated protein kinase kinase kinase 8 (EC 2.7.11.25) (Cancer Osaka thyroid oncogene) (Proto-oncogene c-Cot) (Serine/threonine-protein kinase cot) (Tumor progression locus 2) (TPL-2)
ruditapes_lrc23189	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase kinase kinase 8 (EC 2.7.11.25) (Cancer Osaka thyroid oncogene) (Proto-oncogene c-Cot) (Serine/threonine-protein kinase cot) (Tumor progression locus 2) (TPL-2)
ruditapes_lrc23189	T cell costimulation	other biological processes	P	Mitogen-activated protein kinase kinase kinase 8 (EC 2.7.11.25) (Cancer Osaka thyroid oncogene) (Proto-oncogene c-Cot) (Serine/threonine-protein kinase cot) (Tumor progression locus 2) (TPL-2)
ruditapes_c24342	fungal-type cell wall organization	cell organization and biogenesis	P	Target of rapamycin complex subunit LST8 (TORC subunit LST8) (Lethal with SEC13 protein 8)
ruditapes_c24342	transport	transport	P	Target of rapamycin complex subunit LST8 (TORC subunit LST8) (Lethal with SEC13 protein 8)
ruditapes_c24342	TOR signaling pathway	signal transduction	P	Target of rapamycin complex subunit LST8 (TORC subunit LST8) (Lethal with SEC13 protein 8)
ruditapes_c24342	establishment or maintenance of actin cytoskeleton polarity	cell organization and biogenesis	P	Target of rapamycin complex subunit LST8 (TORC subunit LST8) (Lethal with SEC13 protein 8)
ruditapes_c24342	signal transduction	signal transduction	P	Target of rapamycin complex subunit LST8 (TORC subunit LST8) (Lethal with SEC13 protein 8)
ruditapes_c24342	mitochondrial signaling pathway	signal transduction	P	Target of rapamycin complex subunit LST8 (TORC subunit LST8) (Lethal with SEC13 protein 8)
ruditapes_c24342	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Target of rapamycin complex subunit LST8 (TORC subunit LST8) (Lethal with SEC13 protein 8)
ruditapes_c10606	lipid catabolic process	other metabolic processes	P	Lipase B (EC 3.1.1.3) (CALB)
ruditapes2_c1034	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes_c12971	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes2_c1771	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes2_c1302	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes_c3570	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes_c1710	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes_c5057	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes_c5783	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes2_c6763	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes_c34357	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes_c35938	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes2_c573	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes2_c3027	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)
ruditapes2_lrc3145	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-2/alpha-4 chain
ruditapes2_lrc3145	microtubule-based movement	other biological processes	P	Tubulin alpha-2/alpha-4 chain
ruditapes2_lrc3145	GTP catabolic process	other metabolic processes	P	Tubulin alpha-2/alpha-4 chain
ruditapes2_lrc3145	microtubule-based process	other biological processes	P	Tubulin alpha-2/alpha-4 chain
ruditapes_c13017	protein polymerization	cell organization and biogenesis	P	Tubulin beta chain (Beta-tubulin)
ruditapes_c13017	microtubule-based process	other biological processes	P	Tubulin beta chain (Beta-tubulin)
ruditapes_c13017	GTP catabolic process	other metabolic processes	P	Tubulin beta chain (Beta-tubulin)
ruditapes_c13017	microtubule-based movement	other biological processes	P	Tubulin beta chain (Beta-tubulin)
ruditapes_c22197	nitrogen fixation	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes_c18192	nitrogen compound metabolic process	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes_c18192	metabolic process	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes_c22197	nitrogen compound metabolic process	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes_c18192	nitrogen fixation	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes_c22197	metabolic process	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes2_c699	apoptosis	death	P	Apoptosis inhibitor IAP
ruditapes_c304	apoptosis	death	P	E3 ubiquitin-protein ligase IAP-3 (EC 6.3.2.-) (IAP-3)
ruditapes_c304	interspecies interaction between organisms	other biological processes	P	E3 ubiquitin-protein ligase IAP-3 (EC 6.3.2.-) (IAP-3)
ruditapes_c24197	"transcription, DNA-dependent"	RNA metabolism	P	Probable DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (Late expression factor 8)
ruditapes_c23741	transport	transport	P	"Fatty acid-binding protein, muscle (M-FABP)"
ruditapes_c1892	transport	transport	P	"Fatty acid-binding protein, muscle (M-FABP)"
ruditapes_c19494	G-protein coupled receptor protein signaling pathway	signal transduction	P	Dopamine receptor 1 (D-DOP1) (DmDop1) (dDA1)
ruditapes_c19494	thermotaxis	other biological processes	P	Dopamine receptor 1 (D-DOP1) (DmDop1) (dDA1)
ruditapes_c19494	dopamine receptor signaling pathway	signal transduction	P	Dopamine receptor 1 (D-DOP1) (DmDop1) (dDA1)
ruditapes_c19494	signal transduction	signal transduction	P	Dopamine receptor 1 (D-DOP1) (DmDop1) (dDA1)
ruditapes_c19494	associative learning	other biological processes	P	Dopamine receptor 1 (D-DOP1) (DmDop1) (dDA1)
ruditapes_c19494	visual learning	other biological processes	P	Dopamine receptor 1 (D-DOP1) (DmDop1) (dDA1)
ruditapes_c19494	memory	other biological processes	P	Dopamine receptor 1 (D-DOP1) (DmDop1) (dDA1)
ruditapes_c19494	thermosensory behavior	other biological processes	P	Dopamine receptor 1 (D-DOP1) (DmDop1) (dDA1)
ruditapes_c19494	activation of adenylate cyclase activity by dopamine receptor signaling pathway	signal transduction	P	Dopamine receptor 1 (D-DOP1) (DmDop1) (dDA1)
ruditapes_c19494	activation of adenylate cyclase activity by dopamine receptor signaling pathway	other metabolic processes	P	Dopamine receptor 1 (D-DOP1) (DmDop1) (dDA1)
ruditapes2_c2043	chitin metabolic process	other metabolic processes	P	Uncharacterized 11.2 kDa protein in IE1-IEN intergenic region
ruditapes_lrc25848	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Trans-activating transcriptional regulatory protein (Immediate early protein 1) (IE-1)
ruditapes_lrc25848	"transcription, DNA-dependent"	RNA metabolism	P	Trans-activating transcriptional regulatory protein (Immediate early protein 1) (IE-1)
ruditapes2_lrc5752	virus-host interaction	other biological processes	P	Major envelope glycoprotein (gp67)
ruditapes_c30339	translation	protein metabolism	P	"Peptide chain release factor 1, mitochondrial (MRF-1) (MtRF-1)"
ruditapes_c30339	translational termination	protein metabolism	P	"Peptide chain release factor 1, mitochondrial (MRF-1) (MtRF-1)"
ruditapes_c30339	translational termination	cell organization and biogenesis	P	"Peptide chain release factor 1, mitochondrial (MRF-1) (MtRF-1)"
ruditapes_c25049	transport	transport	P	Stretch-activated cation channel MID1 (Mating pheromone-induced death protein 2)
ruditapes_c25049	calcium ion transport	transport	P	Stretch-activated cation channel MID1 (Mating pheromone-induced death protein 2)
ruditapes_c25049	ion transport	transport	P	Stretch-activated cation channel MID1 (Mating pheromone-induced death protein 2)
ruditapes_c25049	transmembrane calcium ion transport	transport	P	Stretch-activated cation channel MID1 (Mating pheromone-induced death protein 2)
ruditapes_c29908	synaptic vesicle exocytosis	transport	P	Synaptotagmin-1 (Synaptotagmin I) (p65)
ruditapes_c29908	synaptic vesicle exocytosis	cell-cell signaling	P	Synaptotagmin-1 (Synaptotagmin I) (p65)
ruditapes_c29908	negative regulation of calcium ion-dependent exocytosis	transport	P	Synaptotagmin-1 (Synaptotagmin I) (p65)
ruditapes_c29908	transport	transport	P	Synaptotagmin-1 (Synaptotagmin I) (p65)
ruditapes_c24388	"transcription, DNA-dependent"	RNA metabolism	P	Y-box factor homolog (APY1)
ruditapes_c24388	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Y-box factor homolog (APY1)
ruditapes_c7756	neuropeptide signaling pathway	signal transduction	P	FMRFamide-related peptides type HF-1 (TetraFaRP) [Cleaved into: QFYRF-amide; FLRF-amide; FMRF-amide]
ruditapes_lrc35856	negative regulation of thiamin biosynthetic process	other metabolic processes	P	Thiamine pyrophosphokinase (TPK) (Thiamine kinase) (EC 2.7.6.2)
ruditapes_lrc35856	thiamin metabolic process	other metabolic processes	P	Thiamine pyrophosphokinase (TPK) (Thiamine kinase) (EC 2.7.6.2)
ruditapes_lrc35856	thiamin diphosphate biosynthetic process	other metabolic processes	P	Thiamine pyrophosphokinase (TPK) (Thiamine kinase) (EC 2.7.6.2)
ruditapes_lrc35856	phosphorylation	other metabolic processes	P	Thiamine pyrophosphokinase (TPK) (Thiamine kinase) (EC 2.7.6.2)
ruditapes2_c1687	polyamine biosynthetic process	other metabolic processes	P	Ornithine decarboxylase (ODC) (EC 4.1.1.17)
ruditapes_c8999	cell fate specification	other biological processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	embryonic development ending in birth or egg hatching	developmental processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	pronuclear migration	other biological processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	hatching	developmental processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	regulation of mitotic cell cycle	cell cycle and proliferation	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	establishment of mitotic spindle orientation	cell cycle and proliferation	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	establishment of mitotic spindle orientation	cell organization and biogenesis	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	meiosis	cell cycle and proliferation	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	polarity specification of anterior/posterior axis	developmental processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	morphogenesis of an epithelium	developmental processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	nematode larval development	developmental processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	zygote asymmetric cell division	other biological processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	receptor-mediated endocytosis	transport	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	receptor-mediated endocytosis	cell organization and biogenesis	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	pseudocleavage during first cell cycle	developmental processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	reproduction	other biological processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	determination of adult life span	developmental processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	dauer entry	developmental processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	embryonic development	developmental processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes_c8999	asymmetric protein localization involved in cell fate determination	other biological processes	P	14-3-3-like protein 1 (Partitioning defective protein 5)
ruditapes2_c5418	apoptosis	death	P	Apoptosis regulator ced-9 (Cell death protein 9)
ruditapes2_c5418	regulation of apoptosis	death	P	Apoptosis regulator ced-9 (Cell death protein 9)
ruditapes_c18480	defense response to bacterium	stress response	P	4 kDa defensin (Antibacterial 4 kDa peptide)
ruditapes_c18480	defense response	stress response	P	4 kDa defensin (Antibacterial 4 kDa peptide)
ruditapes_c28950	oxidation reduction	other metabolic processes	P	Extracellular superoxide dismutase [Cu-Zn] (EC-SOD) (EC 1.15.1.1)
ruditapes_c28950	superoxide metabolic process	other metabolic processes	P	Extracellular superoxide dismutase [Cu-Zn] (EC-SOD) (EC 1.15.1.1)
ruditapes_c4884	oxidation reduction	other metabolic processes	P	Extracellular superoxide dismutase [Cu-Zn] (EC-SOD) (EC 1.15.1.1)
ruditapes_c4884	response to hypoxia	stress response	P	Extracellular superoxide dismutase [Cu-Zn] (EC-SOD) (EC 1.15.1.1)
ruditapes_c4884	superoxide metabolic process	other metabolic processes	P	Extracellular superoxide dismutase [Cu-Zn] (EC-SOD) (EC 1.15.1.1)
ruditapes_c8493	biological_process	other biological processes	P	Patterned expression site protein 10
ruditapes2_c667	cell division	other biological processes	P	Chondroitin proteoglycan-2 (Cytokinesis protein B0280.5)
ruditapes2_c667	multicellular organismal development	developmental processes	P	Chondroitin proteoglycan-2 (Cytokinesis protein B0280.5)
ruditapes2_c667	cytokinesis after mitosis	cell cycle and proliferation	P	Chondroitin proteoglycan-2 (Cytokinesis protein B0280.5)
ruditapes2_c667	embryonic development ending in birth or egg hatching	developmental processes	P	Chondroitin proteoglycan-2 (Cytokinesis protein B0280.5)
ruditapes2_c667	embryonic development	developmental processes	P	Chondroitin proteoglycan-2 (Cytokinesis protein B0280.5)
ruditapes2_c667	eggshell formation	other biological processes	P	Chondroitin proteoglycan-2 (Cytokinesis protein B0280.5)
ruditapes2_c667	chitin metabolic process	other metabolic processes	P	Chondroitin proteoglycan-2 (Cytokinesis protein B0280.5)
ruditapes2_c667	cell cycle	cell cycle and proliferation	P	Chondroitin proteoglycan-2 (Cytokinesis protein B0280.5)
ruditapes_c32	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit) (PSST subunit)"
ruditapes_c32	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit) (PSST subunit)"
ruditapes_c32	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit) (PSST subunit)"
ruditapes_c32	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit) (PSST subunit)"
ruditapes_c9248	transport	transport	P	Uncharacterized MFS-type transporter YxaM
ruditapes_c9248	transmembrane transport	transport	P	Uncharacterized MFS-type transporter YxaM
ruditapes_c27359	histone H3-K9 methylation	protein metabolism	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	histone H3-K9 methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	axon guidance	developmental processes	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	axon guidance	cell organization and biogenesis	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	syncytial blastoderm mitotic cell cycle	cell cycle and proliferation	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	syncytial blastoderm mitotic cell cycle	developmental processes	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	gene silencing	other metabolic processes	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	neurogenesis	developmental processes	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	"transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	cuticle hydrocarbon biosynthetic process	other metabolic processes	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	cuticle hydrocarbon biosynthetic process	developmental processes	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	histone methylation	protein metabolism	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	histone methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	muscle organ development	developmental processes	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	dendrite morphogenesis	developmental processes	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	dendrite morphogenesis	cell organization and biogenesis	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c27359	multicellular organismal development	developmental processes	P	Histone-lysine N-methyltransferase E(z) (EC 2.1.1.43) (Lysine N-methyltransferase 6) (Protein enhancer of zeste)
ruditapes_c16356	protein amino acid phosphorylation	protein metabolism	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c16356	phosphorylation	other metabolic processes	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c16356	mitotic spindle organization	cell cycle and proliferation	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c16356	mitotic spindle organization	cell organization and biogenesis	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c16356	"Wnt receptor signaling pathway, regulating spindle positioning"	signal transduction	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c16356	apoptosis	death	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c16356	embryonic development ending in birth or egg hatching	developmental processes	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c16356	Wnt receptor signaling pathway	signal transduction	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c16356	reproduction	other biological processes	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes2_c1769	cell division	other biological processes	P	Septin-1 (DIFF6 protein homolog) (Protein innocent bystander)
ruditapes2_c1769	GTP catabolic process	other metabolic processes	P	Septin-1 (DIFF6 protein homolog) (Protein innocent bystander)
ruditapes2_c1769	positive regulation of apoptosis	death	P	Septin-1 (DIFF6 protein homolog) (Protein innocent bystander)
ruditapes2_c1769	cell cycle	cell cycle and proliferation	P	Septin-1 (DIFF6 protein homolog) (Protein innocent bystander)
ruditapes2_c1769	cellularization	developmental processes	P	Septin-1 (DIFF6 protein homolog) (Protein innocent bystander)
ruditapes_c2490	proteolysis	protein metabolism	P	Aspartic proteinase (EC 3.4.23.-)
ruditapes_c2490	lipid metabolic process	other metabolic processes	P	Aspartic proteinase (EC 3.4.23.-)
ruditapes_c20292	positive regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	Signal transducer and activator of transcription 1
ruditapes_c20292	response to peptide hormone stimulus	other biological processes	P	Signal transducer and activator of transcription 1
ruditapes_c20292	activation of caspase activity	death	P	Signal transducer and activator of transcription 1
ruditapes_c20292	signal transduction	signal transduction	P	Signal transducer and activator of transcription 1
ruditapes_c20292	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription 1
ruditapes_c20292	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Signal transducer and activator of transcription 1
ruditapes_c20292	"transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription 1
ruditapes_c20292	response to cytokine stimulus	other biological processes	P	Signal transducer and activator of transcription 1
ruditapes_c20292	response to cAMP	other biological processes	P	Signal transducer and activator of transcription 1
ruditapes_c20292	blood circulation	other biological processes	P	Signal transducer and activator of transcription 1
ruditapes_c20292	induction of apoptosis	death	P	Signal transducer and activator of transcription 1
ruditapes_c20292	positive regulation of mesenchymal cell proliferation	cell cycle and proliferation	P	Signal transducer and activator of transcription 1
ruditapes2_c3340	proteolysis	protein metabolism	P	Trypsin delta/gamma (EC 3.4.21.4)
ruditapes_lrc7530	morphogenesis of an epithelium	developmental processes	P	Protein three rows
ruditapes_lrc7530	centrosome duplication	cell cycle and proliferation	P	Protein three rows
ruditapes_lrc7530	centrosome duplication	cell organization and biogenesis	P	Protein three rows
ruditapes_lrc7530	peripheral nervous system development	developmental processes	P	Protein three rows
ruditapes_lrc7530	mitotic sister chromatid segregation	cell cycle and proliferation	P	Protein three rows
ruditapes_lrc7530	mitotic sister chromatid segregation	cell organization and biogenesis	P	Protein three rows
ruditapes_lrc7530	multicellular organismal development	developmental processes	P	Protein three rows
ruditapes_lrc7530	gut mesoderm development	developmental processes	P	Protein three rows
ruditapes_lrc7530	mitotic sister chromatid separation	cell cycle and proliferation	P	Protein three rows
ruditapes_lrc7530	mitotic sister chromatid separation	cell organization and biogenesis	P	Protein three rows
ruditapes_lrc7530	mitotic spindle organization	cell cycle and proliferation	P	Protein three rows
ruditapes_lrc7530	mitotic spindle organization	cell organization and biogenesis	P	Protein three rows
ruditapes_lrc7530	gonad development	developmental processes	P	Protein three rows
ruditapes_lrc7530	foregut morphogenesis	developmental processes	P	Protein three rows
ruditapes_lrc7530	head involution	developmental processes	P	Protein three rows
ruditapes_lrc7530	open tracheal system development	developmental processes	P	Protein three rows
ruditapes_lrc7530	hindgut morphogenesis	developmental processes	P	Protein three rows
ruditapes_lrc7530	Malpighian tubule morphogenesis	developmental processes	P	Protein three rows
ruditapes_lrc7530	cell division	other biological processes	P	Protein three rows
ruditapes_lrc7530	cell cycle	cell cycle and proliferation	P	Protein three rows
ruditapes_lrc7530	cytokinesis	other biological processes	P	Protein three rows
ruditapes_lrc7530	mitosis	cell cycle and proliferation	P	Protein three rows
ruditapes_lrc7530	mitosis	cell organization and biogenesis	P	Protein three rows
ruditapes_lrc7530	positive regulation of NFAT protein import into nucleus	transport	P	Protein three rows
ruditapes_c8483	response to stress	stress response	P	Universal stress protein YxiE (USP YxiE)
ruditapes2_c369	response to stress	stress response	P	Universal stress protein YxiE (USP YxiE)
ruditapes_c14129	cellular amino acid biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c14129	tryptophan biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c14129	aromatic amino acid family biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c14129	tryptophan metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c14129	metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c28994	amino acid transport	transport	P	Probable amino-acid ABC transporter permease protein YckA
ruditapes_c28994	transport	transport	P	Probable amino-acid ABC transporter permease protein YckA
ruditapes_c30609	alkane catabolic process	other metabolic processes	P	Rubredoxin-NAD(+) reductase (RdxR) (EC 1.18.1.1)
ruditapes_c30609	oxidation reduction	other metabolic processes	P	Rubredoxin-NAD(+) reductase (RdxR) (EC 1.18.1.1)
ruditapes_c13443	"transcription, DNA-dependent"	RNA metabolism	P	Phytochrome D
ruditapes_c13443	signal transduction	signal transduction	P	Phytochrome D
ruditapes_c13443	response to stimulus	other biological processes	P	Phytochrome D
ruditapes_c13443	detection of visible light	other biological processes	P	Phytochrome D
ruditapes_c13443	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Phytochrome D
ruditapes_c13443	protein-chromophore linkage	protein metabolism	P	Phytochrome D
ruditapes_c13443	two-component signal transduction system (phosphorelay)	signal transduction	P	Phytochrome D
ruditapes_c13443	protein-tetrapyrrole linkage	protein metabolism	P	Phytochrome D
ruditapes_c13443	"red, far-red light phototransduction"	other biological processes	P	Phytochrome D
ruditapes_c13443	peptidyl-histidine phosphorylation	protein metabolism	P	Phytochrome D
ruditapes_c13443	red or far red light signaling pathway	signal transduction	P	Phytochrome D
ruditapes_c9310	metabolic process	other metabolic processes	P	4-coumarate--CoA ligase (4CL) (EC 6.2.1.12) (4-coumaroyl-CoA synthase) (Fragment)
ruditapes_c9310	phenylpropanoid metabolic process	other metabolic processes	P	4-coumarate--CoA ligase (4CL) (EC 6.2.1.12) (4-coumaroyl-CoA synthase) (Fragment)
ruditapes_c18175	response to stimulus	other biological processes	P	Protein Star
ruditapes_c18175	photoreceptor cell development	developmental processes	P	Protein Star
ruditapes_c18175	determination of genital disc primordium	developmental processes	P	Protein Star
ruditapes_c18175	peripheral nervous system development	developmental processes	P	Protein Star
ruditapes_c18175	embryonic development	developmental processes	P	Protein Star
ruditapes_c18175	epidermal growth factor receptor signaling pathway	signal transduction	P	Protein Star
ruditapes_c18175	protein targeting to Golgi	transport	P	Protein Star
ruditapes_c18175	ommatidial rotation	developmental processes	P	Protein Star
ruditapes_c18175	ommatidial rotation	cell organization and biogenesis	P	Protein Star
ruditapes_c18175	behavioral response to ethanol	other biological processes	P	Protein Star
ruditapes_c18175	multicellular organismal development	developmental processes	P	Protein Star
ruditapes_c18175	"branched duct epithelial cell fate determination, open tracheal system"	developmental processes	P	Protein Star
ruditapes_c18175	visual perception	other biological processes	P	Protein Star
ruditapes_c18175	regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Protein Star
ruditapes_c18175	mesoderm development	developmental processes	P	Protein Star
ruditapes_c18175	imaginal disc-derived wing morphogenesis	developmental processes	P	Protein Star
ruditapes_c18175	stomatogastric nervous system development	developmental processes	P	Protein Star
ruditapes_c18175	compound eye retinal cell programmed cell death	developmental processes	P	Protein Star
ruditapes_c18175	compound eye retinal cell programmed cell death	death	P	Protein Star
ruditapes_c18175	oogenesis	other biological processes	P	Protein Star
ruditapes_c16334	phosphorylation	other metabolic processes	P	Extracellular signal-regulated kinase 1 (ERK1) (EC 2.7.11.24) (MAP kinase 1)
ruditapes_c16334	sorocarp development	stress response	P	Extracellular signal-regulated kinase 1 (ERK1) (EC 2.7.11.24) (MAP kinase 1)
ruditapes_c16334	sorocarp development	developmental processes	P	Extracellular signal-regulated kinase 1 (ERK1) (EC 2.7.11.24) (MAP kinase 1)
ruditapes_c16334	cell cycle	cell cycle and proliferation	P	Extracellular signal-regulated kinase 1 (ERK1) (EC 2.7.11.24) (MAP kinase 1)
ruditapes_c16334	mitosis	cell organization and biogenesis	P	Extracellular signal-regulated kinase 1 (ERK1) (EC 2.7.11.24) (MAP kinase 1)
ruditapes_c16334	protein amino acid phosphorylation	protein metabolism	P	Extracellular signal-regulated kinase 1 (ERK1) (EC 2.7.11.24) (MAP kinase 1)
ruditapes_c16334	cell division	other biological processes	P	Extracellular signal-regulated kinase 1 (ERK1) (EC 2.7.11.24) (MAP kinase 1)
ruditapes_c16334	mitosis	cell cycle and proliferation	P	Extracellular signal-regulated kinase 1 (ERK1) (EC 2.7.11.24) (MAP kinase 1)
ruditapes_c22994	protein transport	transport	P	Epidermal growth factor receptor substrate 15 (Protein Eps15) (Protein AF-1p)
ruditapes_c22994	clathrin coat assembly	transport	P	Epidermal growth factor receptor substrate 15 (Protein Eps15) (Protein AF-1p)
ruditapes_c22994	clathrin coat assembly	cell organization and biogenesis	P	Epidermal growth factor receptor substrate 15 (Protein Eps15) (Protein AF-1p)
ruditapes_c22994	transport	transport	P	Epidermal growth factor receptor substrate 15 (Protein Eps15) (Protein AF-1p)
ruditapes2_lrc3718	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc5145	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_c1260	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc3718	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc3161	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_s37065	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c3824	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc33138	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc34819	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc36546	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc36902	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc32731	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc3558	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc5040	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c2295	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc5216	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_s37065	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_c1260	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc5145	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc36546	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc36902	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc5216	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc5040	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c2464	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_c3735	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc28453	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc34819	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc3558	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c3824	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc34034	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc3718	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc36902	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c3545	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc21751	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c3545	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc6827	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_s37065	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc39185	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_c1260	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc33138	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc5145	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc32731	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c2295	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc5216	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c2464	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c2295	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc28453	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc5040	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc33138	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc3161	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_c3735	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc21751	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc3558	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c2464	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc34819	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc34034	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc28453	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc36546	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc32731	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_c3735	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc39185	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc6827	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc21751	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c3545	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_c3824	iron ion transport	transport	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_lrc3161	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc34034	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc6827	oxidation reduction	other metabolic processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes_lrc39185	cellular iron ion homeostasis	other biological processes	P	Soma ferritin (EC 1.16.3.1)
ruditapes2_c5772	oxidation reduction	other metabolic processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes2_c4537	oxidation reduction	other metabolic processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes2_c5772	cellular iron ion homeostasis	other biological processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c39561	cellular iron ion homeostasis	other biological processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c3247	cellular iron ion homeostasis	other biological processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c36145	cellular iron ion homeostasis	other biological processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_s33840	iron ion transport	transport	P	Yolk ferritin (EC 1.16.3.1)
ruditapes2_c4041	cellular iron ion homeostasis	other biological processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_s38881	cellular iron ion homeostasis	other biological processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_s37987	oxidation reduction	other metabolic processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c34150	cellular iron ion homeostasis	other biological processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_s38881	oxidation reduction	other metabolic processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c36145	iron ion transport	transport	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_s37987	cellular iron ion homeostasis	other biological processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c3247	iron ion transport	transport	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c39561	iron ion transport	transport	P	Yolk ferritin (EC 1.16.3.1)
ruditapes2_c4041	oxidation reduction	other metabolic processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes2_c4041	iron ion transport	transport	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_s33840	cellular iron ion homeostasis	other biological processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes2_c4537	iron ion transport	transport	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c34150	oxidation reduction	other metabolic processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes2_c5772	iron ion transport	transport	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c36145	oxidation reduction	other metabolic processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_s38881	iron ion transport	transport	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_s37987	iron ion transport	transport	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_s33840	oxidation reduction	other metabolic processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c34150	iron ion transport	transport	P	Yolk ferritin (EC 1.16.3.1)
ruditapes2_c4537	cellular iron ion homeostasis	other biological processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c3247	oxidation reduction	other metabolic processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes_c39561	oxidation reduction	other metabolic processes	P	Yolk ferritin (EC 1.16.3.1)
ruditapes2_c1382	regulation of cell growth	other biological processes	P	Protein NOV (CCN family member 3) (Nephroblastoma-overexpressed gene protein)
ruditapes_c7795	response to cadmium ion	other biological processes	P	14-3-3-like protein GF14 chi (General regulatory factor 1)
ruditapes2_c1164	proteolysis	protein metabolism	P	Virulence-related protein Nf314 (EC 3.4.16.-)
ruditapes_c8146	G1/S transition checkpoint	cell cycle and proliferation	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c8146	DNA unwinding during replication	DNA metabolism	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c8146	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c8146	nervous system development	developmental processes	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c8146	apoptosis	death	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c8146	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c8146	positive regulation of cell proliferation	cell cycle and proliferation	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c8146	cell proliferation	cell cycle and proliferation	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c8146	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c8146	cell differentiation	other biological processes	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c30359	interspecies interaction between organisms	other biological processes	P	Hexon protein (CP-H) (Protein II)
ruditapes_c534	translation	protein metabolism	P	Protein translation factor SUI1 homolog
ruditapes_c534	translational initiation	protein metabolism	P	Protein translation factor SUI1 homolog
ruditapes_c534	regulation of translation	protein metabolism	P	Protein translation factor SUI1 homolog
ruditapes_c21793	cell division	other biological processes	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3) (hCAP-D3)
ruditapes_c21793	mitosis	cell cycle and proliferation	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3) (hCAP-D3)
ruditapes_c21793	mitosis	cell organization and biogenesis	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3) (hCAP-D3)
ruditapes_c21793	cell cycle	cell cycle and proliferation	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3) (hCAP-D3)
ruditapes_c21793	chromosome condensation	cell organization and biogenesis	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3) (hCAP-D3)
ruditapes_c21793	mitotic chromosome condensation	cell cycle and proliferation	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3) (hCAP-D3)
ruditapes_c21793	mitotic chromosome condensation	cell organization and biogenesis	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3) (hCAP-D3)
ruditapes_c20570	proteolysis	protein metabolism	P	Extracellular subtilisin-like protease (EC 3.4.21.-)
ruditapes_lrc20302	proteolysis	protein metabolism	P	Extracellular subtilisin-like protease (EC 3.4.21.-)
ruditapes_c20471	sodium ion transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_c20471	transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_lrc34076	transmembrane transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_lrc34076	ion transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_lrc34076	potassium ion transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_c20471	transmembrane transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_c20471	ion transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_lrc34076	sodium ion transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_c20471	potassium ion transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_lrc34076	hydrogen transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_lrc34076	transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_c20471	hydrogen transport	transport	P	Low affinity vacuolar monovalent cation/H(+) antiporter (Vacuolar Na(+)/H(+) exchanger)
ruditapes_c27705	regulation of protein phosphatase type 2A activity	other metabolic processes	P	Huntingtin (Huntington disease protein) (HD protein)
ruditapes_c27705	apoptosis	death	P	Huntingtin (Huntington disease protein) (HD protein)
ruditapes_c27705	vesicle transport along microtubule	transport	P	Huntingtin (Huntington disease protein) (HD protein)
ruditapes_c27705	Golgi organization	cell organization and biogenesis	P	Huntingtin (Huntington disease protein) (HD protein)
ruditapes_c27705	establishment of mitotic spindle orientation	cell cycle and proliferation	P	Huntingtin (Huntington disease protein) (HD protein)
ruditapes_c27705	establishment of mitotic spindle orientation	cell organization and biogenesis	P	Huntingtin (Huntington disease protein) (HD protein)
ruditapes_c27705	cell death	death	P	Huntingtin (Huntington disease protein) (HD protein)
ruditapes_c27705	organ development	developmental processes	P	Huntingtin (Huntington disease protein) (HD protein)
ruditapes_c27705	"retrograde vesicle-mediated transport, Golgi to ER"	transport	P	Huntingtin (Huntington disease protein) (HD protein)
ruditapes_c20522	striatum development	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	regulation of synaptic plasticity	cell-cell signaling	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	behavior	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	protein import into nucleus	transport	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	regulation of mitochondrial membrane permeability	transport	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	regulation of mitochondrial membrane permeability	cell organization and biogenesis	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	citrulline metabolic process	other metabolic processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	lactate biosynthetic process from pyruvate	other metabolic processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	spermatogenesis	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	social behavior	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	cell aging	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	central nervous system development	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	neuron development	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	paraxial mesoderm formation	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	endosome transport	transport	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	endoplasmic reticulum organization	cell organization and biogenesis	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	urea cycle	other metabolic processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	quinolinate biosynthetic process	other metabolic processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	insulin secretion	transport	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	insulin secretion	cell-cell signaling	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	anterior/posterior pattern formation	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	locomotory behavior	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	learning or memory	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	dopamine receptor signaling pathway	signal transduction	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	hormone metabolic process	other metabolic processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	embryonic development	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	anti-apoptosis	death	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	neuron apoptosis	death	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	ER to Golgi vesicle-mediated transport	transport	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	neural plate formation	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	gastrulation	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	mitochondrial transport	transport	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	vesicle transport along microtubule	transport	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	iron ion homeostasis	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	regulation of mitochondrial membrane potential	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	mitochondrion organization	cell organization and biogenesis	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	axon cargo transport	transport	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	response to calcium ion	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	L-glutamate import	transport	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	determination of adult life span	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	anatomical structure morphogenesis	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	learning	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	brain development	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	neurogenesis	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	olfactory lobe development	developmental processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	apoptosis	death	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	peptide hormone secretion	transport	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	peptide hormone secretion	cell-cell signaling	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	negative regulation of neuron apoptosis	death	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	associative learning	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c20522	visual learning	other biological processes	P	Huntingtin (Huntington disease protein homolog) (HD protein homolog)
ruditapes_c13560	"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c11384	"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c11384	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c13560	positive regulation of transcription from RNA polymerase I promoter	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c11384	"transcription, DNA-dependent"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c13560	"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c13560	"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c13560	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c11384	"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c13560	"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c11384	"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c11384	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c11384	"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c11384	positive regulation of transcription from RNA polymerase I promoter	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c13560	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes_c13560	"transcription, DNA-dependent"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10 (U3 snoRNA-associated protein 10) (U three protein 10) (U3 protein 10 required for transcription) (t-UTP10)
ruditapes2_c21	methylglyoxal biosynthetic process	other metabolic processes	P	Methylglyoxal synthase (MGS) (EC 4.2.3.3)
ruditapes2_lrc4148	methylglyoxal biosynthetic process	other metabolic processes	P	Methylglyoxal synthase (MGS) (EC 4.2.3.3)
ruditapes2_c204	methylglyoxal biosynthetic process	other metabolic processes	P	Methylglyoxal synthase (MGS) (EC 4.2.3.3)
ruditapes_c24537	potassium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-2 (Beta-B1 chain) (Sodium/potassium-dependent ATPase beta-2 subunit)
ruditapes_c24537	sodium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-2 (Beta-B1 chain) (Sodium/potassium-dependent ATPase beta-2 subunit)
ruditapes_c24537	ATP metabolic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit beta-2 (Beta-B1 chain) (Sodium/potassium-dependent ATPase beta-2 subunit)
ruditapes_c24537	transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-2 (Beta-B1 chain) (Sodium/potassium-dependent ATPase beta-2 subunit)
ruditapes_c24537	ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-2 (Beta-B1 chain) (Sodium/potassium-dependent ATPase beta-2 subunit)
ruditapes2_c2349	L-glutamate transport	transport	P	Excitatory amino acid transporter 3 (Excitatory amino-acid carrier 1) (Neuronal and epithelial glutamate transporter) (Sodium-dependent glutamate/aspartate transporter 3) (Solute carrier family 1 member 1)
ruditapes2_c2349	protein homooligomerization	cell organization and biogenesis	P	Excitatory amino acid transporter 3 (Excitatory amino-acid carrier 1) (Neuronal and epithelial glutamate transporter) (Sodium-dependent glutamate/aspartate transporter 3) (Solute carrier family 1 member 1)
ruditapes2_c2349	L-glutamate import	transport	P	Excitatory amino acid transporter 3 (Excitatory amino-acid carrier 1) (Neuronal and epithelial glutamate transporter) (Sodium-dependent glutamate/aspartate transporter 3) (Solute carrier family 1 member 1)
ruditapes2_c2349	transport	transport	P	Excitatory amino acid transporter 3 (Excitatory amino-acid carrier 1) (Neuronal and epithelial glutamate transporter) (Sodium-dependent glutamate/aspartate transporter 3) (Solute carrier family 1 member 1)
ruditapes2_c2349	ion transport	transport	P	Excitatory amino acid transporter 3 (Excitatory amino-acid carrier 1) (Neuronal and epithelial glutamate transporter) (Sodium-dependent glutamate/aspartate transporter 3) (Solute carrier family 1 member 1)
ruditapes2_c2349	synaptic transmission	cell-cell signaling	P	Excitatory amino acid transporter 3 (Excitatory amino-acid carrier 1) (Neuronal and epithelial glutamate transporter) (Sodium-dependent glutamate/aspartate transporter 3) (Solute carrier family 1 member 1)
ruditapes2_c2349	transmembrane transport	transport	P	Excitatory amino acid transporter 3 (Excitatory amino-acid carrier 1) (Neuronal and epithelial glutamate transporter) (Sodium-dependent glutamate/aspartate transporter 3) (Solute carrier family 1 member 1)
ruditapes2_c2349	L-amino acid transport	transport	P	Excitatory amino acid transporter 3 (Excitatory amino-acid carrier 1) (Neuronal and epithelial glutamate transporter) (Sodium-dependent glutamate/aspartate transporter 3) (Solute carrier family 1 member 1)
ruditapes2_c2349	dicarboxylic acid transport	transport	P	Excitatory amino acid transporter 3 (Excitatory amino-acid carrier 1) (Neuronal and epithelial glutamate transporter) (Sodium-dependent glutamate/aspartate transporter 3) (Solute carrier family 1 member 1)
ruditapes_c10537	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c10537	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c10537	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes2_c1731	DNA topological change	DNA metabolism	P	DNA gyrase subunit B (EC 5.99.1.3)
ruditapes2_c2323	negative regulation of peptidase activity	other biological processes	P	Protease inhibitor (BBRPI) [Cleaved into: Serine protease inhibitor; Serine protease inhibitor C; Serine protease inhibitor B; Serine protease inhibitor A]
ruditapes2_c1842	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	response to organic nitrogen	other biological processes	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	DNA repair	stress response	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	DNA repair	DNA metabolism	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	DNA demethylation	DNA metabolism	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	"transcription, DNA-dependent"	RNA metabolism	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	response to drug	other biological processes	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	positive regulation of anti-apoptosis	death	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	negative regulation of smooth muscle cell migration	other biological processes	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	oxidation reduction	other metabolic processes	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	cellular response to hydrogen peroxide	stress response	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	positive regulation of S phase of mitotic cell cycle	cell cycle and proliferation	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	response to DNA damage stimulus	stress response	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	aging	other biological processes	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	regulation of mRNA stability	RNA metabolism	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	positive regulation of DNA repair	stress response	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	positive regulation of DNA repair	DNA metabolism	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes2_c1842	DNA recombination	DNA metabolism	P	"DNA-(apurinic or apyrimidinic site) lyase (EC 3.1.-.-) (EC 4.2.99.18) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (REF-1) (Redox factor-1) [Cleaved into: DNA-(apurinic or apyrimidinic site) lyase, mitochondrial]"
ruditapes_lrc33758	response to biotic stimulus	other biological processes	P	Major pollen allergen Bet v 1-E (Allergen Bet v I-E) (allergen Bet v 1-E)
ruditapes_lrc33758	defense response	stress response	P	Major pollen allergen Bet v 1-E (Allergen Bet v I-E) (allergen Bet v 1-E)
ruditapes_c27645	proteolysis	protein metabolism	P	Rhizopuspepsin-5 (EC 3.4.23.21) (Aspartate protease)
ruditapes_c14048	phosphorylation	other metabolic processes	P	Shaggy-related protein kinase alpha (EC 2.7.11.1) (ASK-alpha)
ruditapes_c14048	meristem structural organization	developmental processes	P	Shaggy-related protein kinase alpha (EC 2.7.11.1) (ASK-alpha)
ruditapes_c14048	protein amino acid phosphorylation	protein metabolism	P	Shaggy-related protein kinase alpha (EC 2.7.11.1) (ASK-alpha)
ruditapes_c8266	double-strand break repair via homologous recombination	stress response	P	DNA repair protein RAD52 homolog
ruditapes_c8266	double-strand break repair via homologous recombination	DNA metabolism	P	DNA repair protein RAD52 homolog
ruditapes_c8266	DNA repair	stress response	P	DNA repair protein RAD52 homolog
ruditapes_c8266	DNA repair	DNA metabolism	P	DNA repair protein RAD52 homolog
ruditapes_c8266	DNA recombination	DNA metabolism	P	DNA repair protein RAD52 homolog
ruditapes_c8266	response to DNA damage stimulus	stress response	P	DNA repair protein RAD52 homolog
ruditapes_lrc33571	sarcomere organization	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	sarcomere organization	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	autolysis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	response to calcium ion	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	positive regulation of satellite cell activation involved in skeletal muscle regeneration	stress response	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	myofibril assembly	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	myofibril assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	protein complex assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	negative regulation of apoptosis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	positive regulation of satellite cell activation involved in skeletal muscle regeneration	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	positive regulation of proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_lrc33571	response to muscle activity	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)
ruditapes_s36361	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional activator CsvR
ruditapes_s36361	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional activator CsvR
ruditapes_c25719	carbohydrate metabolic process	other metabolic processes	P	Alpha-glucosidase (EC 3.2.1.20) (Maltase)
ruditapes_c25719	metabolic process	other metabolic processes	P	Alpha-glucosidase (EC 3.2.1.20) (Maltase)
ruditapes_c4236	vesicle-mediated transport	transport	P	GTPase-activating protein GYP8
ruditapes_c4236	positive regulation of Rab GTPase activity	signal transduction	P	GTPase-activating protein GYP8
ruditapes_c4236	positive regulation of GTPase activity	other biological processes	P	GTPase-activating protein GYP8
ruditapes_c4236	regulation of Rab GTPase activity	signal transduction	P	GTPase-activating protein GYP8
ruditapes_c13344	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulatory protein GAT1
ruditapes_c13344	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcriptional regulatory protein GAT1
ruditapes_c13344	transcription from RNA polymerase II promoter	RNA metabolism	P	Transcriptional regulatory protein GAT1
ruditapes_c13344	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulatory protein GAT1
ruditapes_c24752	protein catabolic process	protein metabolism	P	Proteasome activator BLM10 (Bleomycin resistance protein BLM10)
ruditapes_c24752	proteasome assembly	cell organization and biogenesis	P	Proteasome activator BLM10 (Bleomycin resistance protein BLM10)
ruditapes_c15450	biological_process	other biological processes	P	Uncharacterized protein YFR039C
ruditapes2_c2922	immune response	other biological processes	P	Killer cell immunoglobulin-like receptor 3DL1 (CD158 antigen-like family member E) (HLA-BW4-specific inhibitory NK cell receptor) (MHC class I NK cell receptor) (Natural killer-associated transcript 3) (NKAT-3) (p70 natural killer cell receptor clones CL-2/CL-11) (p70 NK receptor CL-2/CL-11) (CD antigen CD158e)
ruditapes2_c2922	regulation of immune response	other biological processes	P	Killer cell immunoglobulin-like receptor 3DL1 (CD158 antigen-like family member E) (HLA-BW4-specific inhibitory NK cell receptor) (MHC class I NK cell receptor) (Natural killer-associated transcript 3) (NKAT-3) (p70 natural killer cell receptor clones CL-2/CL-11) (p70 NK receptor CL-2/CL-11) (CD antigen CD158e)
ruditapes_c16704	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Activatory protein CHA4
ruditapes_c16704	"transcription, DNA-dependent"	RNA metabolism	P	Activatory protein CHA4
ruditapes_c16704	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Activatory protein CHA4
ruditapes_c16704	cellular amino acid catabolic process	other metabolic processes	P	Activatory protein CHA4
ruditapes_c13463	mitosis	cell cycle and proliferation	P	Caltractin (Centrin) (Fragment)
ruditapes_c13463	mitosis	cell organization and biogenesis	P	Caltractin (Centrin) (Fragment)
ruditapes_c13463	cell division	other biological processes	P	Caltractin (Centrin) (Fragment)
ruditapes_c13463	cell cycle	cell cycle and proliferation	P	Caltractin (Centrin) (Fragment)
ruditapes_c23647	cell division	other biological processes	P	Caltractin (Centrin) (Fragment)
ruditapes_c23647	mitosis	cell cycle and proliferation	P	Caltractin (Centrin) (Fragment)
ruditapes_c23647	mitosis	cell organization and biogenesis	P	Caltractin (Centrin) (Fragment)
ruditapes_c23647	cell cycle	cell cycle and proliferation	P	Caltractin (Centrin) (Fragment)
ruditapes_c24017	carbohydrate metabolic process	other metabolic processes	P	Formate acetyltransferase (EC 2.3.1.54) (Pyruvate formate-lyase)
ruditapes_c24017	glucose metabolic process	other metabolic processes	P	Formate acetyltransferase (EC 2.3.1.54) (Pyruvate formate-lyase)
ruditapes_c24017	metabolic process	other metabolic processes	P	Formate acetyltransferase (EC 2.3.1.54) (Pyruvate formate-lyase)
ruditapes_c19919	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase sigma factor RpoD (Sigma-70)
ruditapes_c19919	transcription initiation	RNA metabolism	P	RNA polymerase sigma factor RpoD (Sigma-70)
ruditapes_c19919	transcription initiation	cell organization and biogenesis	P	RNA polymerase sigma factor RpoD (Sigma-70)
ruditapes_c19919	"transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase sigma factor RpoD (Sigma-70)
ruditapes_s40242	cellular amino acid metabolic process	other metabolic processes	P	NADP-specific glutamate dehydrogenase (NADP-GDH) (EC 1.4.1.4)
ruditapes_s40242	oxidation reduction	other metabolic processes	P	NADP-specific glutamate dehydrogenase (NADP-GDH) (EC 1.4.1.4)
ruditapes_c24290	phospholipid metabolic process	other metabolic processes	P	Uncharacterized protein HI
ruditapes_c3105	metabolic process	other metabolic processes	P	Uncharacterized protein HI
ruditapes_c29257	carbohydrate metabolic process	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c29257	xylulose metabolic process	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c29257	D-xylose metabolic process	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c29257	phosphorylation	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c32524	phosphorylation	other metabolic processes	P	Diacylglycerol kinase (DAGK) (EC 2.7.1.107) (Diglyceride kinase) (DGK)
ruditapes_c32524	phospholipid biosynthetic process	other metabolic processes	P	Diacylglycerol kinase (DAGK) (EC 2.7.1.107) (Diglyceride kinase) (DGK)
ruditapes_lrc10573	transport	transport	P	2Fe-2S ferredoxin
ruditapes_lrc10573	electron transport chain	other metabolic processes	P	2Fe-2S ferredoxin
ruditapes_c9664	transport	transport	P	TonB-dependent heme receptor A
ruditapes_c19441	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator HI
ruditapes_c19441	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator HI
ruditapes_c28014	nucleotide catabolic process	other metabolic processes	P	NAD 5'-nucleotidase (NadN) (EC 3.1.3.5)
ruditapes_lrc10576	phosphorylation	other metabolic processes	P	Aerobic respiration control sensor protein ArcB homolog (EC 2.7.13.3)
ruditapes_lrc10576	two-component signal transduction system (phosphorelay)	signal transduction	P	Aerobic respiration control sensor protein ArcB homolog (EC 2.7.13.3)
ruditapes_lrc10576	"transcription, DNA-dependent"	RNA metabolism	P	Aerobic respiration control sensor protein ArcB homolog (EC 2.7.13.3)
ruditapes_lrc10576	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Aerobic respiration control sensor protein ArcB homolog (EC 2.7.13.3)
ruditapes_lrc10576	peptidyl-histidine phosphorylation	protein metabolism	P	Aerobic respiration control sensor protein ArcB homolog (EC 2.7.13.3)
ruditapes_lrc10576	signal transduction	signal transduction	P	Aerobic respiration control sensor protein ArcB homolog (EC 2.7.13.3)
ruditapes_c20117	phosphorylation	other metabolic processes	P	GTP pyrophosphokinase (EC 2.7.6.5) ((p)ppGpp synthase) (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthase I)
ruditapes_c20117	guanosine tetraphosphate metabolic process	other metabolic processes	P	GTP pyrophosphokinase (EC 2.7.6.5) ((p)ppGpp synthase) (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthase I)
ruditapes_c20117	metabolic process	other metabolic processes	P	GTP pyrophosphokinase (EC 2.7.6.5) ((p)ppGpp synthase) (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthase I)
ruditapes_c13617	thiamin biosynthetic process	other metabolic processes	P	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase (EC 2.7.1.49) (EC 2.7.4.7) (Hydroxymethylpyrimidine kinase) (HMP kinase) (Hydroxymethylpyrimidine phosphate kinase) (HMP-P kinase) (HMP-phosphate kinase) (HMPP kinase)
ruditapes_c13617	phosphorylation	other metabolic processes	P	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase (EC 2.7.1.49) (EC 2.7.4.7) (Hydroxymethylpyrimidine kinase) (HMP kinase) (Hydroxymethylpyrimidine phosphate kinase) (HMP-P kinase) (HMP-phosphate kinase) (HMPP kinase)
ruditapes_c15533	lipopolysaccharide biosynthetic process	other metabolic processes	P	3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) (Monofunctional Kdo transferase)
ruditapes_c15533	carbohydrate metabolic process	other metabolic processes	P	3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) (Monofunctional Kdo transferase)
ruditapes_c15533	biosynthetic process	other metabolic processes	P	3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) (Monofunctional Kdo transferase)
ruditapes_c29192	transport	transport	P	Uncharacterized ABC transporter ATP-binding protein HI
ruditapes_c29192	ATP catabolic process	other metabolic processes	P	Uncharacterized ABC transporter ATP-binding protein HI
ruditapes_c30035	transport	transport	P	Uncharacterized ABC transporter ATP-binding protein HI
ruditapes_c30035	ATP catabolic process	other metabolic processes	P	Uncharacterized ABC transporter ATP-binding protein HI
ruditapes_c2838	DNA repair	stress response	P	Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)
ruditapes_c2838	DNA repair	DNA metabolism	P	Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)
ruditapes_c2838	response to DNA damage stimulus	stress response	P	Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)
ruditapes_c11481	metabolic process	other metabolic processes	P	Putative phosphoethanolamine transferase HI
ruditapes_c30613	oxidation reduction	other metabolic processes	P	Dimethyl sulfoxide reductase DmsA (DMSO reductase) (DMSOR) (Me2SO reductase) (EC 1.8.5.3)
ruditapes_c5714	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator HI
ruditapes_c5714	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator HI
ruditapes_c11452	"transcription, DNA-dependent"	RNA metabolism	P	Glycine cleavage system transcriptional activator homolog
ruditapes_c11452	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Glycine cleavage system transcriptional activator homolog
ruditapes_c27760	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator CysB (Cys regulon transcriptional activator)
ruditapes_c27760	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator CysB (Cys regulon transcriptional activator)
ruditapes_c27760	cysteine biosynthetic process	other metabolic processes	P	HTH-type transcriptional regulator CysB (Cys regulon transcriptional activator)
ruditapes_c27760	cellular amino acid biosynthetic process	other metabolic processes	P	HTH-type transcriptional regulator CysB (Cys regulon transcriptional activator)
ruditapes_c11045	DNA repair	stress response	P	Transcription-repair-coupling factor (TRCF) (EC 3.6.4.-) (ATP-dependent helicase mfd)
ruditapes_c11045	DNA repair	DNA metabolism	P	Transcription-repair-coupling factor (TRCF) (EC 3.6.4.-) (ATP-dependent helicase mfd)
ruditapes_c11045	response to DNA damage stimulus	stress response	P	Transcription-repair-coupling factor (TRCF) (EC 3.6.4.-) (ATP-dependent helicase mfd)
ruditapes_c16173	protein transport	transport	P	Outer-membrane lipoprotein carrier protein
ruditapes_c16173	transport	transport	P	Outer-membrane lipoprotein carrier protein
ruditapes_s39831	protein transport	transport	P	Peptide transport system ATP-binding protein SapF
ruditapes_s39831	peptide transport	transport	P	Peptide transport system ATP-binding protein SapF
ruditapes_s39831	transport	transport	P	Peptide transport system ATP-binding protein SapF
ruditapes_s39831	ATP catabolic process	other metabolic processes	P	Peptide transport system ATP-binding protein SapF
ruditapes_c21386	metabolic process	other metabolic processes	P	Acetyl-CoA acetyltransferase (EC 2.3.1.9) (Acetoacetyl-CoA thiolase)
ruditapes2_c1502	cytochrome complex assembly	cell organization and biogenesis	P	Cytochrome c-type biogenesis protein CycH
ruditapes_c28246	cytochrome complex assembly	cell organization and biogenesis	P	Cytochrome c-type biogenesis protein CycK
ruditapes_c28246	heme transport	transport	P	Cytochrome c-type biogenesis protein CycK
ruditapes_c28246	respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c-type biogenesis protein CycK
ruditapes_c28246	protein complex assembly	cell organization and biogenesis	P	Cytochrome c-type biogenesis protein CycK
ruditapes2_c497	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes2_c497	microtubule-based movement	other biological processes	P	"Dynein heavy chain, cytoplasmic (Dynein heavy chain, cytosolic) (DYHC)"
ruditapes_c29479	metabolic process	other metabolic processes	P	Hippurate hydrolase (EC 3.5.1.32) (Benzoylglycine amidohydrolase) (Hippuricase)
ruditapes_lrc16350	glycerol metabolic process	other metabolic processes	P	Glycerol dehydratase large subunit (EC 4.2.1.30)
ruditapes_lrc16350	metabolic process	other metabolic processes	P	Glycerol dehydratase large subunit (EC 4.2.1.30)
ruditapes_c11791	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized protein YhfY
ruditapes_c12466	response to stress	stress response	P	Universal stress protein A homolog 2
ruditapes_c14266	response to stress	stress response	P	Universal stress protein A homolog 2
ruditapes_c28638	salicylic acid catabolic process	other metabolic processes	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes_c28638	pollen development	developmental processes	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes_c28638	response to oxidative stress	stress response	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes_c28638	phenylpropanoid metabolic process	other metabolic processes	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes_c28638	drought recovery	stress response	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes_c28638	lignin catabolic process	other metabolic processes	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes_c28638	biosynthetic process	other metabolic processes	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes_c28638	response to UV-B	other biological processes	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes_c28638	L-phenylalanine catabolic process	other metabolic processes	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes_c12685	biosynthetic process	other metabolic processes	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes_c12685	L-phenylalanine catabolic process	other metabolic processes	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes_c12685	phenylpropanoid metabolic process	other metabolic processes	P	Phenylalanine ammonia-lyase (EC 4.3.1.24)
ruditapes2_c318	translation	protein metabolism	P	60S ribosomal protein L34 (L31)
ruditapes2_c4998	translation	protein metabolism	P	60S ribosomal protein L34 (L31)
ruditapes_c17429	determination of adult life span	developmental processes	P	Uncharacterized protein R12B2.6
ruditapes_c26905	cell wall organization	cell organization and biogenesis	P	Chaperone protein HifB
ruditapes_s38119	signal transduction	signal transduction	P	G-protein coupled receptor GRL101
ruditapes_c27176	signal transduction	signal transduction	P	G-protein coupled receptor GRL101
ruditapes_s38119	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor GRL101
ruditapes_c27176	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor GRL101
ruditapes_c12112	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 1
ruditapes_c12112	signal transduction	signal transduction	P	G-protein coupled receptor 1
ruditapes_c29520	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable actinorhodin operon activatory protein
ruditapes_c29520	"transcription, DNA-dependent"	RNA metabolism	P	Probable actinorhodin operon activatory protein
ruditapes_c29520	antibiotic biosynthetic process	other metabolic processes	P	Probable actinorhodin operon activatory protein
ruditapes_c29520	two-component signal transduction system (phosphorelay)	signal transduction	P	Probable actinorhodin operon activatory protein
ruditapes_c8449	parathyroid gland development	developmental processes	P	Crk-like protein
ruditapes_c8449	blood vessel development	developmental processes	P	Crk-like protein
ruditapes_c8449	Ras protein signal transduction	signal transduction	P	Crk-like protein
ruditapes_c8449	JNK cascade	signal transduction	P	Crk-like protein
ruditapes_c8449	JNK cascade	stress response	P	Crk-like protein
ruditapes_c8449	organ morphogenesis	developmental processes	P	Crk-like protein
ruditapes_c8449	anterior/posterior pattern formation	developmental processes	P	Crk-like protein
ruditapes_c8449	heart development	developmental processes	P	Crk-like protein
ruditapes_c8449	pattern specification process	developmental processes	P	Crk-like protein
ruditapes_c8449	thymus development	developmental processes	P	Crk-like protein
ruditapes_c31486	glycolysis	other metabolic processes	P	"Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 (EC 4.1.2.13)"
ruditapes_c20333	carbohydrate metabolic process	other metabolic processes	P	"Sedoheptulose-1,7-bisphosphatase, chloroplastic (EC 3.1.3.37) (SED(1,7)P2ase) (Sedoheptulose bisphosphatase) (SBPase)"
ruditapes_c20333	reductive pentose-phosphate cycle	other metabolic processes	P	"Sedoheptulose-1,7-bisphosphatase, chloroplastic (EC 3.1.3.37) (SED(1,7)P2ase) (Sedoheptulose bisphosphatase) (SBPase)"
ruditapes_c21614	phospholipid biosynthetic process	other metabolic processes	P	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) (Phosphatidylglycerophosphate synthase) (PGP synthase)
ruditapes_c29614	transmembrane transport	transport	P	Probable metabolite transport protein CsbC
ruditapes_c29614	transport	transport	P	Probable metabolite transport protein CsbC
ruditapes_c26669	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (Octanol dehydrogenase) (EC 1.1.1.73) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c26669	ethanol oxidation	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (Octanol dehydrogenase) (EC 1.1.1.73) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c26669	cellular alcohol metabolic process	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (Octanol dehydrogenase) (EC 1.1.1.73) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c26669	visual learning	other biological processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (Octanol dehydrogenase) (EC 1.1.1.73) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc31893	metabolic process	other metabolic processes	P	Glutathione S-transferase (EC 2.5.1.18) (GST class-pi)
ruditapes_c2129	metabolic process	other metabolic processes	P	Glutathione S-transferase 2 (EC 2.5.1.18) (GST class-pi)
ruditapes_s37606	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc34340	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s37886	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s39682	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc6403	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_c19	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s38236	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s39677	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc35237	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc6759	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc35608	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc5206	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc32105	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s40243	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc6304	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s37553	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc6829	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s35939	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc4114	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc36752	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s37930	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc34557	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc36119	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s40107	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc38883	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc6250	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s36706	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc4101	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_c4239	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s36597	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc32626	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc4160	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc36912	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc37914	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc37053	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s40220	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s36825	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc36339	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc36112	biological_process	other biological processes	P	Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-sigma)
ruditapes_c31124	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 8 (26S proteasome AAA-ATPase subunit RPT6) (Proteasome 26S subunit ATPase 5) (SUG1 homolog) (xSUG1)
ruditapes_c7297	ATP catabolic process	other metabolic processes	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit RPT1) (Proteasome 26S subunit ATPase 2) (Protein MSS1)
ruditapes_c14899	ubiquitin-dependent protein catabolic process	protein metabolism	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit RPT1) (Proteasome 26S subunit ATPase 2) (Protein MSS1)
ruditapes_c14899	ATP catabolic process	other metabolic processes	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit RPT1) (Proteasome 26S subunit ATPase 2) (Protein MSS1)
ruditapes_c7297	ubiquitin-dependent protein catabolic process	protein metabolism	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit RPT1) (Proteasome 26S subunit ATPase 2) (Protein MSS1)
ruditapes_c7297	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit RPT1) (Proteasome 26S subunit ATPase 2) (Protein MSS1)
ruditapes_c14899	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit RPT1) (Proteasome 26S subunit ATPase 2) (Protein MSS1)
ruditapes_c16914	metabolic process	other metabolic processes	P	L-threonine dehydratase biosynthetic IlvA (EC 4.3.1.19) (Threonine deaminase)
ruditapes_c10341	cellular amino acid metabolic process	other metabolic processes	P	L-threonine dehydratase biosynthetic IlvA (EC 4.3.1.19) (Threonine deaminase)
ruditapes_c16914	isoleucine biosynthetic process	other metabolic processes	P	L-threonine dehydratase biosynthetic IlvA (EC 4.3.1.19) (Threonine deaminase)
ruditapes_c10341	cellular amino acid biosynthetic process	other metabolic processes	P	L-threonine dehydratase biosynthetic IlvA (EC 4.3.1.19) (Threonine deaminase)
ruditapes_c16914	cellular amino acid biosynthetic process	other metabolic processes	P	L-threonine dehydratase biosynthetic IlvA (EC 4.3.1.19) (Threonine deaminase)
ruditapes_c16914	cellular amino acid metabolic process	other metabolic processes	P	L-threonine dehydratase biosynthetic IlvA (EC 4.3.1.19) (Threonine deaminase)
ruditapes_c10341	metabolic process	other metabolic processes	P	L-threonine dehydratase biosynthetic IlvA (EC 4.3.1.19) (Threonine deaminase)
ruditapes_c16914	branched chain family amino acid biosynthetic process	other metabolic processes	P	L-threonine dehydratase biosynthetic IlvA (EC 4.3.1.19) (Threonine deaminase)
ruditapes_c10341	branched chain family amino acid biosynthetic process	other metabolic processes	P	L-threonine dehydratase biosynthetic IlvA (EC 4.3.1.19) (Threonine deaminase)
ruditapes_c10341	isoleucine biosynthetic process	other metabolic processes	P	L-threonine dehydratase biosynthetic IlvA (EC 4.3.1.19) (Threonine deaminase)
ruditapes2_c6171	sensory perception of chemical stimulus	other biological processes	P	Serpentine receptor class beta-10 (Protein srb-10)
ruditapes2_c5862	sensory perception of chemical stimulus	other biological processes	P	Serpentine receptor class beta-10 (Protein srb-10)
ruditapes_c37434	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 6B (ATPase MS73)
ruditapes_s36531	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 6B (ATPase MS73)
ruditapes_c5215	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 6B (ATPase MS73)
ruditapes_c17686	positive regulation of neuroblast proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of neuroblast proliferation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	immune response	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of neuroblast proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of neuroblast proliferation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	embryonic hindlimb morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	epithelial to mesenchymal transition	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	epithelial to mesenchymal transition	cell organization and biogenesis	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of glial cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of glial cell proliferation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of BMP signaling pathway	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	organ regeneration	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	cell differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	regulation of cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	cell fate specification	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	axonogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	axonogenesis	cell organization and biogenesis	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of transcription of Notch receptor target	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of transcription of Notch receptor target	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	endoderm development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of glial cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of glial cell proliferation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	anagen	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of epithelial cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	response to corticosteroid stimulus	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	tissue regeneration	stress response	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	tissue regeneration	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	astrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	anagen	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	regulation of cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	glial cell differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	epithelial to mesenchymal transition	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	epithelial to mesenchymal transition	cell organization and biogenesis	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	somatic stem cell division	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of apoptosis	death	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of glial cell differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	liver development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	regulation of gene expression	other metabolic processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of photoreceptor cell differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	auditory receptor cell fate commitment	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	spermatogenesis	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	regulation of somitogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	regulation of gene expression	other metabolic processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	regulation of epithelial cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	astrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	determination of left/right symmetry	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of photoreceptor cell differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	regulation of developmental process	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of osteoblast differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	oligodendrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	neural tube development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	Notch signaling pathway	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	determination of left/right symmetry	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of JAK-STAT cascade	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	"transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	embryonic limb morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of epithelial cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	embryonic development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	glial cell differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	response to corticosteroid stimulus	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of neuron differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	regulation of somitogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	embryonic development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	endoderm development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	embryonic limb morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	liver development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of cell-substrate adhesion	cell adhesion	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	somatic stem cell division	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of osteoblast differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of transcription of Notch receptor target	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of glial cell differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	heart development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	organ regeneration	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of astrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	auditory receptor cell fate commitment	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of neuron differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	axonogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	axonogenesis	cell organization and biogenesis	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of transcription of Notch receptor target	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	response to lipopolysaccharide	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of keratinocyte differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of cell differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	cell fate specification	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	spermatogenesis	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	hair follicle morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	Notch receptor processing	protein metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	compartment specification	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	sprouting angiogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of JAK-STAT cascade	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	cell differentiation in spinal cord	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of calcium ion-dependent exocytosis	transport	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	gene expression	other metabolic processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of calcium ion-dependent exocytosis	transport	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	regulation of neurogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	Notch receptor processing	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of epithelial to mesenchymal transition	cell organization and biogenesis	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	multicellular organismal development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of cell differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	epidermis development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	regulation of epithelial cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	neuron fate commitment	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	embryonic hindlimb morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	forebrain development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of myoblast differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	epidermis development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of epithelial to mesenchymal transition	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	neuron differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of cell death	death	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	foregut morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	keratinocyte differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	compartment specification	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of oligodendrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	forebrain development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of myoblast differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	cell differentiation in spinal cord	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	in utero embryonic development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of BMP signaling pathway	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	neuron differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	lung development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of keratinocyte differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	branching morphogenesis of a tube	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	multicellular organismal development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	tissue regeneration	stress response	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	tissue regeneration	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	gene expression	other metabolic processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of apoptosis	death	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of BMP signaling pathway	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	immune response	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	regulation of neurogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	keratinocyte differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of endothelial cell differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	lung development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	Notch receptor processing	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	Notch receptor processing	protein metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of BMP signaling pathway	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	foregut morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	neuron fate commitment	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of cell-substrate adhesion	cell adhesion	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	sprouting angiogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	cell fate commitment	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	heart development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	cell fate commitment	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	response to lipopolysaccharide	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	cell differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	hair follicle morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of epithelial to mesenchymal transition	cell organization and biogenesis	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	in utero embryonic development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of astrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of endothelial cell differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	branching morphogenesis of a tube	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	oligodendrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of oligodendrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of apoptosis	death	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	neural tube development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	"transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	positive regulation of epithelial to mesenchymal transition	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	negative regulation of cell death	death	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	positive regulation of apoptosis	death	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	regulation of developmental process	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12420	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c17686	Notch signaling pathway	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes2_lrc4221	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 (Ubiquitin A-52 residue ribosomal protein fusion product 1) [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52) (CEP53)]
ruditapes_c25763	cell adhesion	cell adhesion	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c25763	T cell selection	developmental processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c25763	immune response	other biological processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c25763	T cell differentiation	developmental processes	P	T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4)
ruditapes_c9218	rRNA transport	transport	P	Thiosulfate sulfurtransferase (EC 2.8.1.1) (Rhodanese)
ruditapes_c27276	rRNA transport	transport	P	Thiosulfate sulfurtransferase (EC 2.8.1.1) (Rhodanese)
ruditapes_c12407	rRNA transport	transport	P	Thiosulfate sulfurtransferase (EC 2.8.1.1) (Rhodanese)
ruditapes_c21942	"transcription, DNA-dependent"	RNA metabolism	P	Homeobox-leucine zipper protein HAT14 (Homeodomain-leucine zipper protein HAT14) (HD-ZIP protein 14)
ruditapes_c21942	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox-leucine zipper protein HAT14 (Homeodomain-leucine zipper protein HAT14) (HD-ZIP protein 14)
ruditapes2_c2073	tRNA aminoacylation for protein translation	protein metabolism	P	GU4 nucleic-binding protein 1 (G4p1 protein) (P42) (Protein ARC1)
ruditapes2_c2073	tRNA aminoacylation for protein translation	RNA metabolism	P	GU4 nucleic-binding protein 1 (G4p1 protein) (P42) (Protein ARC1)
ruditapes2_c2073	positive regulation of ligase activity	other biological processes	P	GU4 nucleic-binding protein 1 (G4p1 protein) (P42) (Protein ARC1)
ruditapes_c19280	positive regulation of ligase activity	other biological processes	P	GU4 nucleic-binding protein 1 (G4p1 protein) (P42) (Protein ARC1)
ruditapes_c19280	tRNA aminoacylation for protein translation	protein metabolism	P	GU4 nucleic-binding protein 1 (G4p1 protein) (P42) (Protein ARC1)
ruditapes_c19280	tRNA aminoacylation for protein translation	RNA metabolism	P	GU4 nucleic-binding protein 1 (G4p1 protein) (P42) (Protein ARC1)
ruditapes_c20766	pyridine nucleotide biosynthetic process	other metabolic processes	P	Nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase [decarboxylating]) (QAPRTase)
ruditapes_c20766	NAD biosynthetic process	other metabolic processes	P	Nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase [decarboxylating]) (QAPRTase)
ruditapes_c19778	sodium-independent organic anion transport	transport	P	Solute carrier organic anion transporter family member 1A2 (OATP-A) (Organic anion-transporting polypeptide 1) (OATP-1) (Sodium-independent organic anion transporter) (Solute carrier family 21 member 3)
ruditapes_c19778	bile acid metabolic process	other metabolic processes	P	Solute carrier organic anion transporter family member 1A2 (OATP-A) (Organic anion-transporting polypeptide 1) (OATP-1) (Sodium-independent organic anion transporter) (Solute carrier family 21 member 3)
ruditapes_c19778	transport	transport	P	Solute carrier organic anion transporter family member 1A2 (OATP-A) (Organic anion-transporting polypeptide 1) (OATP-1) (Sodium-independent organic anion transporter) (Solute carrier family 21 member 3)
ruditapes_c19778	organic anion transport	transport	P	Solute carrier organic anion transporter family member 1A2 (OATP-A) (Organic anion-transporting polypeptide 1) (OATP-1) (Sodium-independent organic anion transporter) (Solute carrier family 21 member 3)
ruditapes_c19778	transmembrane transport	transport	P	Solute carrier organic anion transporter family member 1A2 (OATP-A) (Organic anion-transporting polypeptide 1) (OATP-1) (Sodium-independent organic anion transporter) (Solute carrier family 21 member 3)
ruditapes_c19778	ion transport	transport	P	Solute carrier organic anion transporter family member 1A2 (OATP-A) (Organic anion-transporting polypeptide 1) (OATP-1) (Sodium-independent organic anion transporter) (Solute carrier family 21 member 3)
ruditapes_c19778	bile acid and bile salt transport	transport	P	Solute carrier organic anion transporter family member 1A2 (OATP-A) (Organic anion-transporting polypeptide 1) (OATP-1) (Sodium-independent organic anion transporter) (Solute carrier family 21 member 3)
ruditapes_lrc23215	translation	protein metabolism	P	"Ribosomal protein S10, mitochondrial"
ruditapes_c11823	translation	protein metabolism	P	"Ribosomal protein S3, mitochondrial"
ruditapes_lrc33086	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4805	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4805	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes_lrc32432	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33090	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4805	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4885	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4282	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33104	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc32432	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc33086	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc5275	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc13862	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4219	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4805	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4425	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes2_lrc5275	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4508	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc13862	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc33090	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes2_lrc4508	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc32634	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4425	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc33090	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4885	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes2_lrc4508	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4508	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes_lrc32432	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc6729	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc5275	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc33090	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes2_lrc4425	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4282	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33086	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc33090	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4219	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc5275	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes_lrc32432	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc32432	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes_lrc32634	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc33086	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc4508	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4805	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33086	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4885	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc4219	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4219	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes_lrc33104	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4508	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc32432	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33086	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33086	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes2_lrc5275	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc13862	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc6729	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33090	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc4282	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4219	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4282	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc5275	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc4508	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc13862	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33104	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc32634	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc32634	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes_lrc33104	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc13862	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes2_lrc4425	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4425	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes2_lrc6729	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes2_lrc4885	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc32634	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc5275	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc5275	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc5275	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes_lrc13862	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc33104	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes2_lrc6729	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4885	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes2_lrc4282	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes_lrc33090	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4885	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4425	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc13862	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes_lrc32432	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes2_lrc4425	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4885	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc6729	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4282	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes2_lrc6729	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4805	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4282	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc6729	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes_lrc33086	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4425	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4219	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc4219	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes_lrc13862	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc32432	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4805	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes_lrc33090	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes2_lrc4508	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes2_lrc5275	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc32432	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc5275	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4219	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4282	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc6729	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4219	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4885	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33104	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc33090	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4805	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4885	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4885	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes_lrc13862	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4508	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4508	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33090	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc33104	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc6729	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4805	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc33090	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc32634	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4425	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc4219	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33090	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc32634	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4885	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc32432	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33086	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc6729	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc33104	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc33086	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes_lrc33104	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes2_lrc4805	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes2_lrc4885	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4425	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4282	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4425	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes2_lrc4805	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc32634	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc4282	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes_lrc32432	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc32432	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes2_lrc4805	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc32634	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes2_lrc4219	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes2_lrc4219	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc4282	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4805	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4508	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4425	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4282	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33086	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes2_lrc4805	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc33090	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc13862	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc33086	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc5275	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4508	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc5275	gene expression	other metabolic processes	P	60S ribosomal protein L21
ruditapes2_lrc5275	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4425	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc13862	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc32634	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33090	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc6729	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc6729	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes2_lrc4219	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4282	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc32432	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc33104	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes_lrc32634	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc32634	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes_lrc33104	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc33086	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc4885	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4282	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc32634	viral reproduction	other biological processes	P	60S ribosomal protein L21
ruditapes_lrc32432	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc13862	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc13862	translational termination	cell organization and biogenesis	P	60S ribosomal protein L21
ruditapes_lrc33104	translational termination	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc13862	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4508	viral infectious cycle	other biological processes	P	60S ribosomal protein L21
ruditapes2_lrc4425	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4885	translational initiation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33086	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc6729	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc33104	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes_lrc33104	translational elongation	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4508	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L21
ruditapes_lrc32634	viral transcription	RNA metabolism	P	60S ribosomal protein L21
ruditapes2_lrc4219	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes2_lrc6729	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L21
ruditapes_lrc36885	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s36839	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc35409	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	viral transcription	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc36885	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	SRP-dependent cotranslational protein targeting to membrane	transport	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s39612	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4749	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	RNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc4728	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	gene expression	other metabolic processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34700	translational initiation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_s37398	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc32652	viral infectious cycle	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_lrc5699	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc34626	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33985	cellular protein metabolic process	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	regulation of translational fidelity	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc33063	mRNA metabolic process	RNA metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc38435	translational elongation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_lrc21551	viral reproduction	other biological processes	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	translational termination	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes_c6093	translational termination	cell organization and biogenesis	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_c188	translation	protein metabolism	P	40S ribosomal protein S2 (Fragment)
ruditapes_c5912	DNA topological change	DNA metabolism	P	DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) (Omega-protein) (Relaxing enzyme) (Swivelase) (Untwisting enzyme)
ruditapes_c4837	cellular amine metabolic process	other metabolic processes	P	Phenylethylamine oxidase (EC 1.4.3.21) (Primary amine oxidase)
ruditapes_c4837	oxidation reduction	other metabolic processes	P	Phenylethylamine oxidase (EC 1.4.3.21) (Primary amine oxidase)
ruditapes_c13590	photosynthetic electron transport in photosystem II	other metabolic processes	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c13590	transport	transport	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c13590	photosynthesis	other metabolic processes	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c13590	"photosynthesis, light reaction"	other metabolic processes	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c13590	electron transport chain	other metabolic processes	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c13590	oxidation reduction	other metabolic processes	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c13590	response to herbicide	stress response	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c17490	response to stress	stress response	P	Homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein ATHB-7) (Homeodomain transcription factor ATHB-7)
ruditapes_c17490	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein ATHB-7) (Homeodomain transcription factor ATHB-7)
ruditapes_c17490	response to abscisic acid stimulus	other biological processes	P	Homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein ATHB-7) (Homeodomain transcription factor ATHB-7)
ruditapes_c17490	response to water deprivation	stress response	P	Homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein ATHB-7) (Homeodomain transcription factor ATHB-7)
ruditapes_c17490	"transcription, DNA-dependent"	RNA metabolism	P	Homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein ATHB-7) (Homeodomain transcription factor ATHB-7)
ruditapes_c17490	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein ATHB-7) (Homeodomain transcription factor ATHB-7)
ruditapes_c17490	abscisic acid mediated signaling	signal transduction	P	Homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein ATHB-7) (Homeodomain transcription factor ATHB-7)
ruditapes_lrc38790	cell wall organization	cell organization and biogenesis	P	Minor teichoic acid biosynthesis protein GgaA
ruditapes_lrc38790	teichoic acid biosynthetic process	other metabolic processes	P	Minor teichoic acid biosynthesis protein GgaA
ruditapes_c19291	cellular respiration	other metabolic processes	P	Trimethylamine-N-oxide reductase 2 (TMAO reductase 2) (Trimethylamine oxidase 2) (EC 1.7.2.3)
ruditapes_c19291	oxidation reduction	other metabolic processes	P	Trimethylamine-N-oxide reductase 2 (TMAO reductase 2) (Trimethylamine oxidase 2) (EC 1.7.2.3)
ruditapes_s39023	oxidation reduction	other metabolic processes	P	Trimethylamine-N-oxide reductase 2 (TMAO reductase 2) (Trimethylamine oxidase 2) (EC 1.7.2.3)
ruditapes_s39023	cellular respiration	other metabolic processes	P	Trimethylamine-N-oxide reductase 2 (TMAO reductase 2) (Trimethylamine oxidase 2) (EC 1.7.2.3)
ruditapes_c9274	signal transduction	signal transduction	P	Ras GTPase-activating-like protein IQGAP1 (p195)
ruditapes_c9274	regulation of small GTPase mediated signal transduction	signal transduction	P	Ras GTPase-activating-like protein IQGAP1 (p195)
ruditapes_c9274	positive regulation of GTPase activity	other biological processes	P	Ras GTPase-activating-like protein IQGAP1 (p195)
ruditapes_c9274	small GTPase mediated signal transduction	signal transduction	P	Ras GTPase-activating-like protein IQGAP1 (p195)
ruditapes_c9274	positive regulation of Ras GTPase activity	signal transduction	P	Ras GTPase-activating-like protein IQGAP1 (p195)
ruditapes_c9274	regulation of insulin secretion	transport	P	Ras GTPase-activating-like protein IQGAP1 (p195)
ruditapes_c9274	regulation of insulin secretion	cell-cell signaling	P	Ras GTPase-activating-like protein IQGAP1 (p195)
ruditapes_c9274	energy reserve metabolic process	other metabolic processes	P	Ras GTPase-activating-like protein IQGAP1 (p195)
ruditapes_c4856	biological_process	other biological processes	P	Uncharacterized protein YGL176C
ruditapes_c26077	"DNA catabolic process, endonucleolytic"	DNA metabolism	P	DNA endonuclease SAE2 (EC 3.1.-.-) (Completion of meiotic recombination protein 1) (Sporulation in the absence of SPO11 protein 2)
ruditapes_c26077	response to DNA damage stimulus	stress response	P	DNA endonuclease SAE2 (EC 3.1.-.-) (Completion of meiotic recombination protein 1) (Sporulation in the absence of SPO11 protein 2)
ruditapes_c26077	"gene conversion at mating-type locus, DNA double-strand break processing"	stress response	P	DNA endonuclease SAE2 (EC 3.1.-.-) (Completion of meiotic recombination protein 1) (Sporulation in the absence of SPO11 protein 2)
ruditapes_c26077	"gene conversion at mating-type locus, DNA double-strand break processing"	DNA metabolism	P	DNA endonuclease SAE2 (EC 3.1.-.-) (Completion of meiotic recombination protein 1) (Sporulation in the absence of SPO11 protein 2)
ruditapes_c26077	DNA repair	stress response	P	DNA endonuclease SAE2 (EC 3.1.-.-) (Completion of meiotic recombination protein 1) (Sporulation in the absence of SPO11 protein 2)
ruditapes_c26077	DNA repair	DNA metabolism	P	DNA endonuclease SAE2 (EC 3.1.-.-) (Completion of meiotic recombination protein 1) (Sporulation in the absence of SPO11 protein 2)
ruditapes_c26077	meiotic DNA double-strand break processing	stress response	P	DNA endonuclease SAE2 (EC 3.1.-.-) (Completion of meiotic recombination protein 1) (Sporulation in the absence of SPO11 protein 2)
ruditapes_c26077	meiotic DNA double-strand break processing	DNA metabolism	P	DNA endonuclease SAE2 (EC 3.1.-.-) (Completion of meiotic recombination protein 1) (Sporulation in the absence of SPO11 protein 2)
ruditapes_c26077	meiosis	cell cycle and proliferation	P	DNA endonuclease SAE2 (EC 3.1.-.-) (Completion of meiotic recombination protein 1) (Sporulation in the absence of SPO11 protein 2)
ruditapes_c26077	meiotic DNA double-strand break processing	cell cycle and proliferation	P	DNA endonuclease SAE2 (EC 3.1.-.-) (Completion of meiotic recombination protein 1) (Sporulation in the absence of SPO11 protein 2)
ruditapes_c4555	mRNA processing	RNA metabolism	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c4555	response to DNA damage stimulus	stress response	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c4555	cell cycle	cell cycle and proliferation	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c4555	protein amino acid phosphorylation	protein metabolism	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c4555	positive regulation of transcription from RNA polymerase I promoter	RNA metabolism	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c4555	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c4555	mRNA 3'-end processing	RNA metabolism	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c4555	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c4555	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c4555	positive regulation of translational fidelity	protein metabolism	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c4555	"transcription, DNA-dependent"	RNA metabolism	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c4555	positive regulation of RNA elongation	RNA metabolism	P	CTD kinase subunit beta (CTDK-I subunit beta) (CTD kinase 38 kDa subunit) (CTD kinase subunit 2)
ruditapes_c10686	glycogen biosynthetic process	other metabolic processes	P	Glycogenin-1 (GN-1) (GN1) (EC 2.4.1.186)
ruditapes_c10686	glycogen catabolic process	other metabolic processes	P	Glycogenin-1 (GN-1) (GN1) (EC 2.4.1.186)
ruditapes_c10686	glucose metabolic process	other metabolic processes	P	Glycogenin-1 (GN-1) (GN1) (EC 2.4.1.186)
ruditapes_c10686	carbohydrate metabolic process	other metabolic processes	P	Glycogenin-1 (GN-1) (GN1) (EC 2.4.1.186)
ruditapes_lrc8001	biological_process	other biological processes	P	Autophagy-related protein 36
ruditapes_c6492	protein folding	protein metabolism	P	Prefoldin subunit 1 (Genes involved in microtubule biogenesis protein 6) (Gim complex subunit 6) (GimC subunit 6)
ruditapes_c6492	cytoskeleton organization	cell organization and biogenesis	P	Prefoldin subunit 1 (Genes involved in microtubule biogenesis protein 6) (Gim complex subunit 6) (GimC subunit 6)
ruditapes_c17826	biological_process	other biological processes	P	Mitochondrial outer membrane protein IML2 (Increased minichromosome loss protein 2)
ruditapes_c28908	biological_process	other biological processes	P	Mitochondrial outer membrane protein IML2 (Increased minichromosome loss protein 2)
ruditapes_c20285	biological_process	other biological processes	P	Protein PRY1 (Pathogen related in Sc 1)
ruditapes_c28315	mitotic recombination	DNA metabolism	P	Uncharacterized protein IRC8 (Increased recombination centers protein 8)
ruditapes_c23308	"negative regulation of transposition, RNA-mediated"	other biological processes	P	Regulator of Ty1 transposition protein 101 (Cullin-8)
ruditapes_c23308	regulation of mitosis	cell cycle and proliferation	P	Regulator of Ty1 transposition protein 101 (Cullin-8)
ruditapes_c23308	regulation of mitosis	cell organization and biogenesis	P	Regulator of Ty1 transposition protein 101 (Cullin-8)
ruditapes_c23308	nonfunctional rRNA decay	RNA metabolism	P	Regulator of Ty1 transposition protein 101 (Cullin-8)
ruditapes_c23308	protein ubiquitination	protein metabolism	P	Regulator of Ty1 transposition protein 101 (Cullin-8)
ruditapes_c23308	ubiquitin-dependent protein catabolic process	protein metabolism	P	Regulator of Ty1 transposition protein 101 (Cullin-8)
ruditapes_c23308	replication fork processing	stress response	P	Regulator of Ty1 transposition protein 101 (Cullin-8)
ruditapes_c23308	replication fork processing	DNA metabolism	P	Regulator of Ty1 transposition protein 101 (Cullin-8)
ruditapes_c15188	biological_process	other biological processes	P	Uncharacterized protein YJL016W
ruditapes_c7928	macroautophagy	stress response	P	ARF guanine-nucleotide exchange factor 1
ruditapes_c7928	macroautophagy	other metabolic processes	P	ARF guanine-nucleotide exchange factor 1
ruditapes_c7928	"retrograde vesicle-mediated transport, Golgi to ER"	transport	P	ARF guanine-nucleotide exchange factor 1
ruditapes_c7928	regulation of ARF protein signal transduction	signal transduction	P	ARF guanine-nucleotide exchange factor 1
ruditapes_c7928	ER to Golgi vesicle-mediated transport	transport	P	ARF guanine-nucleotide exchange factor 1
ruditapes_c7928	actin cytoskeleton organization	cell organization and biogenesis	P	ARF guanine-nucleotide exchange factor 1
ruditapes_c7928	intra-Golgi vesicle-mediated transport	transport	P	ARF guanine-nucleotide exchange factor 1
ruditapes_c17392	fungal-type cell wall organization	cell organization and biogenesis	P	Sulfite reductase [NADPH] subunit beta (EC 1.8.1.2) (Extracellular mutant protein 17)
ruditapes_c17392	sulfate assimilation	other metabolic processes	P	Sulfite reductase [NADPH] subunit beta (EC 1.8.1.2) (Extracellular mutant protein 17)
ruditapes_c17392	methionine biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] subunit beta (EC 1.8.1.2) (Extracellular mutant protein 17)
ruditapes_c17392	metabolic process	other metabolic processes	P	Sulfite reductase [NADPH] subunit beta (EC 1.8.1.2) (Extracellular mutant protein 17)
ruditapes_c17392	cysteine biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] subunit beta (EC 1.8.1.2) (Extracellular mutant protein 17)
ruditapes_c17392	cellular amino acid biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] subunit beta (EC 1.8.1.2) (Extracellular mutant protein 17)
ruditapes_c17392	oxidation reduction	other metabolic processes	P	Sulfite reductase [NADPH] subunit beta (EC 1.8.1.2) (Extracellular mutant protein 17)
ruditapes_c28849	protein amino acid O-linked glycosylation	protein metabolism	P	Dolichyl-phosphate-mannose--protein mannosyltransferase 3 (EC 2.4.1.109)
ruditapes_c7262	protein folding	protein metabolism	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c7262	locomotion	other biological processes	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c7262	growth	other biological processes	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c7262	embryonic development ending in birth or egg hatching	developmental processes	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c7262	apoptosis	death	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c7262	determination of adult life span	developmental processes	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c7262	hermaphrodite genitalia development	developmental processes	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c7262	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c7262	reproduction	other biological processes	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c7262	receptor-mediated endocytosis	transport	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c7262	receptor-mediated endocytosis	cell organization and biogenesis	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c7262	nematode larval development	developmental processes	P	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
ruditapes_c12058	negative regulation of cell proliferation	cell cycle and proliferation	P	Testin (TES1/TES2)
ruditapes_c18022	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c18022	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c18022	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes2_c1010	carbohydrate metabolic process	other metabolic processes	P	Phosphomannomutase (PMM) (EC 5.4.2.8)
ruditapes_c5085	translation	protein metabolism	P	30S ribosomal protein S19
ruditapes_c21380	translation	protein metabolism	P	30S ribosomal protein S17
ruditapes_c13829	ATP catabolic process	other metabolic processes	P	Energy-coupling factor transporter ATP-binding protein EcfA1 (ECF transporter A component EcfA1) (EC 3.6.3.-)
ruditapes_c13829	transport	transport	P	Energy-coupling factor transporter ATP-binding protein EcfA1 (ECF transporter A component EcfA1) (EC 3.6.3.-)
ruditapes_c24181	response to DNA damage stimulus	stress response	P	Probable DNA helicase II homolog (EC 3.6.4.12)
ruditapes_c24181	DNA replication	DNA metabolism	P	Probable DNA helicase II homolog (EC 3.6.4.12)
ruditapes_c24181	DNA repair	stress response	P	Probable DNA helicase II homolog (EC 3.6.4.12)
ruditapes_c24181	DNA repair	DNA metabolism	P	Probable DNA helicase II homolog (EC 3.6.4.12)
ruditapes_c5011	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c5011	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c5011	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c5011	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c13240	sister chromatid cohesion	cell cycle and proliferation	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c13240	sister chromatid cohesion	cell organization and biogenesis	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c13240	DNA repair	DNA metabolism	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c13240	DNA recombination	DNA metabolism	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c13240	chromosome organization	cell organization and biogenesis	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c13240	chromosome condensation	cell organization and biogenesis	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c13240	DNA repair	stress response	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c7762	rRNA catabolic process	RNA metabolism	P	Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)
ruditapes_c7762	RNA processing	RNA metabolism	P	Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)
ruditapes_lrc32269	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc32269	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc32269	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc32269	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_lrc32269	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes2_c2629	DNA topological change	DNA metabolism	P	DNA gyrase subunit B (EC 5.99.1.3)
ruditapes_c16161	signal transduction	signal transduction	P	Rap1 GTPase-activating protein 1 (Rap1GAP) (Rap1GAP1)
ruditapes_c16161	positive regulation of GTPase activity	other biological processes	P	Rap1 GTPase-activating protein 1 (Rap1GAP) (Rap1GAP1)
ruditapes_c16161	regulation of Ras GTPase activity	signal transduction	P	Rap1 GTPase-activating protein 1 (Rap1GAP) (Rap1GAP1)
ruditapes_c16161	regulation of small GTPase mediated signal transduction	signal transduction	P	Rap1 GTPase-activating protein 1 (Rap1GAP) (Rap1GAP1)
ruditapes_c16161	GTP catabolic process	other metabolic processes	P	Rap1 GTPase-activating protein 1 (Rap1GAP) (Rap1GAP1)
ruditapes_c26185	cellular aldehyde metabolic process	other metabolic processes	P	Fatty aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase 3) (Aldehyde dehydrogenase family 3 member A2)
ruditapes_c26185	oxidation reduction	other metabolic processes	P	Fatty aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase 3) (Aldehyde dehydrogenase family 3 member A2)
ruditapes_c26185	metabolic process	other metabolic processes	P	Fatty aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase 3) (Aldehyde dehydrogenase family 3 member A2)
ruditapes2_c207	G-protein coupled receptor protein signaling pathway	signal transduction	P	Sphingosine 1-phosphate receptor 2 (S1P receptor 2) (S1P2) (AGR16) (Endothelial differentiation G-protein coupled receptor 5) (G-protein coupled receptor H218) (Sphingosine 1-phosphate receptor Edg-5) (S1P receptor Edg-5)
ruditapes2_c207	behavior	other biological processes	P	Sphingosine 1-phosphate receptor 2 (S1P receptor 2) (S1P2) (AGR16) (Endothelial differentiation G-protein coupled receptor 5) (G-protein coupled receptor H218) (Sphingosine 1-phosphate receptor Edg-5) (S1P receptor Edg-5)
ruditapes2_c207	signal transduction	signal transduction	P	Sphingosine 1-phosphate receptor 2 (S1P receptor 2) (S1P2) (AGR16) (Endothelial differentiation G-protein coupled receptor 5) (G-protein coupled receptor H218) (Sphingosine 1-phosphate receptor Edg-5) (S1P receptor Edg-5)
ruditapes2_c147	response to stress	stress response	P	Heat shock cognate 71 kDa protein
ruditapes_lrc31629	dopamine receptor signaling pathway	signal transduction	P	D(1)-like dopamine receptor
ruditapes_lrc31629	signal transduction	signal transduction	P	D(1)-like dopamine receptor
ruditapes_lrc31629	G-protein coupled receptor protein signaling pathway	signal transduction	P	D(1)-like dopamine receptor
ruditapes_c12960	MAPKKK cascade	signal transduction	P	Dual specificity mitogen-activated protein kinase kinase 4 (MAP kinase kinase 4) (MAPKK 4) (EC 2.7.12.2) (C-JUN N-terminal kinase kinase 1) (JNK kinase 1) (JNKK 1) (JNK-activating kinase 1) (MAPK/ERK kinase 4) (MEK 4) (SAPK/ERK kinase 1) (SEK1)
ruditapes_c12960	phosphorylation	other metabolic processes	P	Dual specificity mitogen-activated protein kinase kinase 4 (MAP kinase kinase 4) (MAPKK 4) (EC 2.7.12.2) (C-JUN N-terminal kinase kinase 1) (JNK kinase 1) (JNKK 1) (JNK-activating kinase 1) (MAPK/ERK kinase 4) (MEK 4) (SAPK/ERK kinase 1) (SEK1)
ruditapes_c12960	apoptosis	death	P	Dual specificity mitogen-activated protein kinase kinase 4 (MAP kinase kinase 4) (MAPKK 4) (EC 2.7.12.2) (C-JUN N-terminal kinase kinase 1) (JNK kinase 1) (JNKK 1) (JNK-activating kinase 1) (MAPK/ERK kinase 4) (MEK 4) (SAPK/ERK kinase 1) (SEK1)
ruditapes_c12960	protein amino acid phosphorylation	protein metabolism	P	Dual specificity mitogen-activated protein kinase kinase 4 (MAP kinase kinase 4) (MAPKK 4) (EC 2.7.12.2) (C-JUN N-terminal kinase kinase 1) (JNK kinase 1) (JNKK 1) (JNK-activating kinase 1) (MAPK/ERK kinase 4) (MEK 4) (SAPK/ERK kinase 1) (SEK1)
ruditapes_c12960	response to stress	stress response	P	Dual specificity mitogen-activated protein kinase kinase 4 (MAP kinase kinase 4) (MAPKK 4) (EC 2.7.12.2) (C-JUN N-terminal kinase kinase 1) (JNK kinase 1) (JNKK 1) (JNK-activating kinase 1) (MAPK/ERK kinase 4) (MEK 4) (SAPK/ERK kinase 1) (SEK1)
ruditapes_lrc14075	translational elongation	protein metabolism	P	60S acidic ribosomal protein P0 (60S ribosomal protein L10E)
ruditapes_lrc14075	ribosome biogenesis	other biological processes	P	60S acidic ribosomal protein P0 (60S ribosomal protein L10E)
ruditapes_lrc32788	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L26 (Fragment)
ruditapes_lrc32788	rRNA processing	RNA metabolism	P	60S ribosomal protein L26 (Fragment)
ruditapes2_c4994	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L26 (Fragment)
ruditapes2_c5320	rRNA processing	RNA metabolism	P	60S ribosomal protein L26 (Fragment)
ruditapes2_c4994	translation	protein metabolism	P	60S ribosomal protein L26 (Fragment)
ruditapes2_c5320	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L26 (Fragment)
ruditapes2_c5320	translation	protein metabolism	P	60S ribosomal protein L26 (Fragment)
ruditapes2_c4994	rRNA processing	RNA metabolism	P	60S ribosomal protein L26 (Fragment)
ruditapes_lrc32788	translation	protein metabolism	P	60S ribosomal protein L26 (Fragment)
ruditapes_lrc37774	translation	protein metabolism	P	40S ribosomal protein S3-B (S1B)
ruditapes_lrc38700	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33006	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5052	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s39578	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4084	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38963	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3952	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32681	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35724	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5765	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32766	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34940	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38963	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38700	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35844	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s39578	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38963	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3952	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3952	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc39074	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34830	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3736	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s38653	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35844	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4918	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32681	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35724	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5765	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32130	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34940	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4918	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32766	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s39578	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4918	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc6642	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34830	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5052	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5052	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34940	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32766	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34830	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32372	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s38653	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc6642	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c1259	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34830	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38700	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4918	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33436	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc6642	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c1259	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc6642	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32372	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33436	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc39074	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32234	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34940	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35844	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5765	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38963	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4512	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4891	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5765	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35844	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32130	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc39074	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32234	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc39074	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5765	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35724	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc39074	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35724	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33006	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s38653	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34830	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4084	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35844	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32165	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3952	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35724	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32234	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32372	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5052	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38963	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4918	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32130	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4891	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33006	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32766	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4891	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32165	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3736	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4084	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38700	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34830	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33436	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32130	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32372	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35844	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3952	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32766	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38700	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4512	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4891	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s38653	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c1259	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s39578	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38700	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32165	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4084	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4512	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32766	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5052	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33006	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32681	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32372	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c1259	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32165	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33436	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4512	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32165	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4512	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc6642	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3736	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s38653	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32681	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33006	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3952	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4918	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33006	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3736	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32130	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc35724	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4512	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32130	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4891	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c1259	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc39074	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5052	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34940	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3736	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4084	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32234	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc34940	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc38963	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_c1259	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32234	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc3736	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32681	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc6642	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s39578	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s38653	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32372	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4084	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc4891	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33436	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_s39578	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32165	skeletal system development	developmental processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc33436	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32234	extracellular matrix organization	cell organization and biogenesis	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5765	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc32681	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_lrc12879	translation	protein metabolism	P	Glutamine--tRNA ligase (EC 6.1.1.18) (Glutaminyl-tRNA synthetase) (GlnRS)
ruditapes_lrc12879	gene expression	other metabolic processes	P	Glutamine--tRNA ligase (EC 6.1.1.18) (Glutaminyl-tRNA synthetase) (GlnRS)
ruditapes_lrc12879	glutaminyl-tRNA aminoacylation	protein metabolism	P	Glutamine--tRNA ligase (EC 6.1.1.18) (Glutaminyl-tRNA synthetase) (GlnRS)
ruditapes_lrc12879	glutaminyl-tRNA aminoacylation	RNA metabolism	P	Glutamine--tRNA ligase (EC 6.1.1.18) (Glutaminyl-tRNA synthetase) (GlnRS)
ruditapes_lrc12879	tRNA aminoacylation	RNA metabolism	P	Glutamine--tRNA ligase (EC 6.1.1.18) (Glutaminyl-tRNA synthetase) (GlnRS)
ruditapes_lrc12879	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamine--tRNA ligase (EC 6.1.1.18) (Glutaminyl-tRNA synthetase) (GlnRS)
ruditapes_lrc12879	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamine--tRNA ligase (EC 6.1.1.18) (Glutaminyl-tRNA synthetase) (GlnRS)
ruditapes_s37113	translation	protein metabolism	P	60S ribosomal protein L6 (TAX-responsive enhancer element-binding protein 107) (TAXREB107)
ruditapes_lrc32809	translation	protein metabolism	P	60S ribosomal protein L6 (TAX-responsive enhancer element-binding protein 107) (TAXREB107)
ruditapes2_c4603	translation	protein metabolism	P	60S ribosomal protein L6 (TAX-responsive enhancer element-binding protein 107) (TAXREB107)
ruditapes_lrc12434	translation	protein metabolism	P	60S ribosomal protein L6 (TAX-responsive enhancer element-binding protein 107) (TAXREB107)
ruditapes2_lrc4839	translation	protein metabolism	P	60S ribosomal protein L6 (TAX-responsive enhancer element-binding protein 107) (TAXREB107)
ruditapes_lrc32328	translation	protein metabolism	P	60S ribosomal protein L6 (TAX-responsive enhancer element-binding protein 107) (TAXREB107)
ruditapes_s37050	heterophilic cell adhesion	cell adhesion	P	Galectin-7 (Gal-7) (HKL-14) (PI7) (p53-induced gene 1 protein)
ruditapes_s37050	apoptosis	death	P	Galectin-7 (Gal-7) (HKL-14) (PI7) (p53-induced gene 1 protein)
ruditapes_lrc39211	apoptosis	death	P	Galectin-7 (Gal-7) (HKL-14) (PI7) (p53-induced gene 1 protein)
ruditapes_lrc39211	heterophilic cell adhesion	cell adhesion	P	Galectin-7 (Gal-7) (HKL-14) (PI7) (p53-induced gene 1 protein)
ruditapes_lrc28272	transport	transport	P	Carnitine O-acetyltransferase (Carnitine acetylase) (EC 2.3.1.7) (Carnitine acetyltransferase) (CAT) (CrAT)
ruditapes_lrc28272	fatty acid metabolic process	other metabolic processes	P	Carnitine O-acetyltransferase (Carnitine acetylase) (EC 2.3.1.7) (Carnitine acetyltransferase) (CAT) (CrAT)
ruditapes_lrc28272	lipid metabolic process	other metabolic processes	P	Carnitine O-acetyltransferase (Carnitine acetylase) (EC 2.3.1.7) (Carnitine acetyltransferase) (CAT) (CrAT)
ruditapes2_lrc7052	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (CBP30) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5443	cell differentiation	other biological processes	P	Galectin-3 (Gal-3) (35 kDa lectin) (CBP30) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc7052	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (CBP30) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc7052	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (CBP30) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes2_lrc7052	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (CBP30) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5443	innate immune response	stress response	P	Galectin-3 (Gal-3) (35 kDa lectin) (CBP30) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5443	mRNA processing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (CBP30) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c5443	RNA splicing	RNA metabolism	P	Galectin-3 (Gal-3) (35 kDa lectin) (CBP30) (Carbohydrate-binding protein 35) (CBP 35) (Galactose-specific lectin 3) (IgE-binding protein) (Laminin-binding protein) (Lectin L-29) (Mac-2 antigen)
ruditapes_c30123	metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes_c6359	hypoxanthine salvage	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c6359	IMP metabolic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c6359	positive regulation of dopamine metabolic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c6359	guanine salvage	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c6359	purine nucleotide biosynthetic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c6359	GMP catabolic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c6359	hypoxanthine metabolic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c6359	protein homotetramerization	cell organization and biogenesis	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c6359	purine ribonucleoside salvage	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c6359	nucleoside metabolic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c6359	behavior	other biological processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_s40347	axonogenesis involved in innervation	developmental processes	P	Neuronal pentraxin-1 (NP1) (47 kDa taipoxin-binding protein) (Neuronal pentraxin I) (NP-I)
ruditapes_s40347	axonogenesis involved in innervation	cell organization and biogenesis	P	Neuronal pentraxin-1 (NP1) (47 kDa taipoxin-binding protein) (Neuronal pentraxin I) (NP-I)
ruditapes_c20705	xanthine catabolic process	other metabolic processes	P	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (XD) (EC 1.17.1.4); Xanthine oxidase (XO) (EC 1.17.3.2) (Xanthine oxidoreductase) (XOR)]
ruditapes_c20705	oxidation reduction	other metabolic processes	P	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (XD) (EC 1.17.1.4); Xanthine oxidase (XO) (EC 1.17.3.2) (Xanthine oxidoreductase) (XOR)]
ruditapes_c20705	purine base metabolic process	other metabolic processes	P	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (XD) (EC 1.17.1.4); Xanthine oxidase (XO) (EC 1.17.3.2) (Xanthine oxidoreductase) (XOR)]
ruditapes_c20705	"nucleobase, nucleoside and nucleotide metabolic process"	other metabolic processes	P	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (XD) (EC 1.17.1.4); Xanthine oxidase (XO) (EC 1.17.3.2) (Xanthine oxidoreductase) (XOR)]
ruditapes_c20705	urate biosynthetic process	other metabolic processes	P	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (XD) (EC 1.17.1.4); Xanthine oxidase (XO) (EC 1.17.3.2) (Xanthine oxidoreductase) (XOR)]
ruditapes_c32065	translation	protein metabolism	P	60S ribosomal protein L6
ruditapes_c32065	reproduction	other biological processes	P	60S ribosomal protein L6
ruditapes_c32065	apoptosis	death	P	60S ribosomal protein L6
ruditapes_c32065	determination of adult life span	developmental processes	P	60S ribosomal protein L6
ruditapes_lrc35949	nematode larval development	developmental processes	P	60S ribosomal protein L6
ruditapes_lrc35949	growth	other biological processes	P	60S ribosomal protein L6
ruditapes_lrc35949	translation	protein metabolism	P	60S ribosomal protein L6
ruditapes_lrc35949	reproduction	other biological processes	P	60S ribosomal protein L6
ruditapes_c32065	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L6
ruditapes_c32065	growth	other biological processes	P	60S ribosomal protein L6
ruditapes_c32065	nematode larval development	developmental processes	P	60S ribosomal protein L6
ruditapes_lrc35949	determination of adult life span	developmental processes	P	60S ribosomal protein L6
ruditapes_lrc35949	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L6
ruditapes_lrc35949	apoptosis	death	P	60S ribosomal protein L6
ruditapes_c7858	cell wall organization	cell organization and biogenesis	P	Chitin synthase (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase)
ruditapes_c7858	chitin biosynthetic process	other metabolic processes	P	Chitin synthase (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase)
ruditapes_c6934	negative regulation of proteolysis	protein metabolism	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	negative regulation of membrane protein ectodomain proteolysis	protein metabolism	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	response to folic acid	other biological processes	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	response to organic substance	other biological processes	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	induction of apoptosis	death	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	response to mechanical stimulus	other biological processes	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	negative regulation of catalytic activity	other biological processes	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	central nervous system development	developmental processes	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	response to organic cyclic substance	other biological processes	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	response to amino acid stimulus	other biological processes	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	response to hormone stimulus	other biological processes	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	aging	other biological processes	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	response to estrogen stimulus	other biological processes	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	tissue regeneration	stress response	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c6934	tissue regeneration	developmental processes	P	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)
ruditapes_c20377	transport	transport	P	"Inward rectifier potassium channel 4 (HIRK2) (HRK1) (Hippocampal inward rectifier) (HIR) (Inward rectifier K(+) channel Kir2.3) (IRK-3) (Potassium channel, inwardly rectifying subfamily J member 4)"
ruditapes_c20377	regulation of transmembrane ion transport	transport	P	"Inward rectifier potassium channel 4 (HIRK2) (HRK1) (Hippocampal inward rectifier) (HIR) (Inward rectifier K(+) channel Kir2.3) (IRK-3) (Potassium channel, inwardly rectifying subfamily J member 4)"
ruditapes_c20377	ion transport	transport	P	"Inward rectifier potassium channel 4 (HIRK2) (HRK1) (Hippocampal inward rectifier) (HIR) (Inward rectifier K(+) channel Kir2.3) (IRK-3) (Potassium channel, inwardly rectifying subfamily J member 4)"
ruditapes_c20377	potassium ion transport	transport	P	"Inward rectifier potassium channel 4 (HIRK2) (HRK1) (Hippocampal inward rectifier) (HIR) (Inward rectifier K(+) channel Kir2.3) (IRK-3) (Potassium channel, inwardly rectifying subfamily J member 4)"
ruditapes_c20377	synaptic transmission	cell-cell signaling	P	"Inward rectifier potassium channel 4 (HIRK2) (HRK1) (Hippocampal inward rectifier) (HIR) (Inward rectifier K(+) channel Kir2.3) (IRK-3) (Potassium channel, inwardly rectifying subfamily J member 4)"
ruditapes_c26585	vacuolar protein catabolic process	protein metabolism	P	Carboxypeptidase A2 (EC 3.4.17.15)
ruditapes_c26585	proteolysis	protein metabolism	P	Carboxypeptidase A2 (EC 3.4.17.15)
ruditapes_c20618	transport	transport	P	Sodium- and chloride-dependent GABA transporter 1 (GAT-1) (Solute carrier family 6 member 1)
ruditapes_c20618	neurotransmitter transport	transport	P	Sodium- and chloride-dependent GABA transporter 1 (GAT-1) (Solute carrier family 6 member 1)
ruditapes_c8939	regulation of synaptic transmission	cell-cell signaling	P	"Glutamate receptor 4 (GluR-4) (GluR4) (AMPA-selective glutamate receptor 4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4) (GluA4)"
ruditapes_c8939	ion transport	transport	P	"Glutamate receptor 4 (GluR-4) (GluR4) (AMPA-selective glutamate receptor 4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4) (GluA4)"
ruditapes_c8939	"positive regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	"Glutamate receptor 4 (GluR-4) (GluR4) (AMPA-selective glutamate receptor 4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4) (GluA4)"
ruditapes_c8939	synaptic transmission	cell-cell signaling	P	"Glutamate receptor 4 (GluR-4) (GluR4) (AMPA-selective glutamate receptor 4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4) (GluA4)"
ruditapes_c8939	glutamate signaling pathway	signal transduction	P	"Glutamate receptor 4 (GluR-4) (GluR4) (AMPA-selective glutamate receptor 4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4) (GluA4)"
ruditapes_c8939	ionotropic glutamate receptor signaling pathway	signal transduction	P	"Glutamate receptor 4 (GluR-4) (GluR4) (AMPA-selective glutamate receptor 4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4) (GluA4)"
ruditapes_c8939	transport	transport	P	"Glutamate receptor 4 (GluR-4) (GluR4) (AMPA-selective glutamate receptor 4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4) (GluA4)"
ruditapes_c25312	glycine transport	transport	P	Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (Solute carrier family 6 member 9)
ruditapes_c25312	amino acid transport	transport	P	Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (Solute carrier family 6 member 9)
ruditapes_c25312	neurotransmitter transport	transport	P	Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (Solute carrier family 6 member 9)
ruditapes_c25312	transmembrane transport	transport	P	Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (Solute carrier family 6 member 9)
ruditapes_c25312	transport	transport	P	Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (Solute carrier family 6 member 9)
ruditapes_c11988	JNK cascade	signal transduction	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	JNK cascade	stress response	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	"dorsal closure, spreading of leading edge cells"	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	regulation of cytoskeleton organization	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	actin cytoskeleton organization	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	muscle attachment	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	glial cell migration	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	gastrulation involving germ band extension	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	multicellular organismal development	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	melanization defense response	stress response	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	melanization defense response	other metabolic processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	gastrulation	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	posterior midgut invagination	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	establishment of imaginal disc-derived wing hair orientation	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	response to DNA damage stimulus	stress response	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	actin filament organization	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	establishment of protein localization	other biological processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	neuroblast proliferation	cell cycle and proliferation	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	neuroblast proliferation	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	"regulation of tube length, open tracheal system"	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	salivary gland morphogenesis	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	"dorsal closure, amnioserosa morphology change"	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	ommatidial rotation	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	ommatidial rotation	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	establishment of imaginal disc-derived wing hair orientation	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	cytoskeleton organization	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	myofibril assembly	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	myofibril assembly	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	germ-band extension	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	"lumen formation, open tracheal system"	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	cellularization	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	Wnt receptor signaling pathway	signal transduction	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	border follicle cell migration	other biological processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	dendrite self-avoidance	other biological processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	establishment of planar polarity	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	imaginal disc-derived wing hair organization	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	imaginal disc-derived wing hair organization	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	"spiracle morphogenesis, open tracheal system"	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	response to stimulus	other biological processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	ventral furrow formation	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	visual perception	other biological processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	regulation of axonogenesis	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	regulation of axonogenesis	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	regulation of Malpighian tubule size	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	pseudocleavage during syncytial blastoderm formation	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	dorsal closure	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	open tracheal system development	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	endocytosis	transport	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	endocytosis	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	wound healing	stress response	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	motor axon guidance	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	motor axon guidance	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	determination of left/right symmetry	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	epidermal growth factor receptor signaling pathway	signal transduction	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	regulation of embryonic cell shape	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	regulation of embryonic cell shape	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	compound eye morphogenesis	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	cytokinesis	other biological processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	peripheral nervous system development	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	hemocyte migration	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	maintenance of epithelial cell apical/basal polarity	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	axon guidance	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	axon guidance	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	actin filament bundle formation	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	germ cell migration	other biological processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	"dorsal closure, leading edge cell differentiation"	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	"branch fusion, open tracheal system"	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	dendrite morphogenesis	developmental processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	dendrite morphogenesis	cell organization and biogenesis	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	GTP catabolic process	other metabolic processes	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	small GTPase mediated signal transduction	signal transduction	P	Ras-like GTP-binding protein Rho1
ruditapes_c11988	establishment of tissue polarity	other biological processes	P	Ras-like GTP-binding protein Rho1
ruditapes_s36935	translation	protein metabolism	P	40S ribosomal protein S7
ruditapes_lrc33579	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc33579	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc33777	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc33777	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc32454	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc32454	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc32454	translation	protein metabolism	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc4741	translation	protein metabolism	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc4956	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc4956	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc5755	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc5755	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc4741	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc4741	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes_s39343	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc34735	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc34735	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc4956	translation	protein metabolism	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc33777	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc33777	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes_s37612	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_s37612	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc33579	translation	protein metabolism	P	60S ribosomal protein L23 (L17A)
ruditapes_s39343	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_s37612	translation	protein metabolism	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc33579	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc33579	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc32454	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc32454	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc5755	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes_s39343	translation	protein metabolism	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc34735	translation	protein metabolism	P	60S ribosomal protein L23 (L17A)
ruditapes_s39343	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_s39343	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc33777	translation	protein metabolism	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc4956	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc4956	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc5755	translation	protein metabolism	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc34735	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc34735	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc5755	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_s37612	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes_s37612	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc4741	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L23 (L17A)
ruditapes2_lrc4741	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L23 (L17A)
ruditapes_lrc17449	one-carbon compound metabolic process	other metabolic processes	P	Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase I) (Carbonic anhydrase I) (CA-I)
ruditapes_c30080	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c30080	DNA-dependent DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c30080	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c19447	carboxylic acid metabolic process	other metabolic processes	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c19447	neurotransmitter biosynthetic process	other metabolic processes	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c19447	neurotransmitter biosynthetic process	cell-cell signaling	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c20718	protein folding	protein metabolism	P	Prefoldin subunit 3 (Genes involved in microtubule biogenesis protein 2) (Gim complex subunit 2) (GimC subunit 2)
ruditapes_c20718	tubulin complex assembly	cell organization and biogenesis	P	Prefoldin subunit 3 (Genes involved in microtubule biogenesis protein 2) (Gim complex subunit 2) (GimC subunit 2)
ruditapes2_lrc5694	protein folding	protein metabolism	P	12 kDa FK506-binding protein (FKBP) (EC 5.2.1.8) (Macrolide-binding protein) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase)
ruditapes2_lrc5694	response to DNA damage stimulus	stress response	P	12 kDa FK506-binding protein (FKBP) (EC 5.2.1.8) (Macrolide-binding protein) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase)
ruditapes2_lrc5694	peptidyl-proline modification	protein metabolism	P	12 kDa FK506-binding protein (FKBP) (EC 5.2.1.8) (Macrolide-binding protein) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase)
ruditapes2_lrc5694	protein peptidyl-prolyl isomerization	protein metabolism	P	12 kDa FK506-binding protein (FKBP) (EC 5.2.1.8) (Macrolide-binding protein) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase)
ruditapes_lrc39131	"transcription, DNA-dependent"	RNA metabolism	P	DNA-binding protein RFX5 (Regulatory factor X 5)
ruditapes_lrc39131	"regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA-binding protein RFX5 (Regulatory factor X 5)
ruditapes_lrc39131	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	DNA-binding protein RFX5 (Regulatory factor X 5)
ruditapes_c20977	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein sak1
ruditapes_c20977	regulation of mitotic cell cycle	cell cycle and proliferation	P	Protein sak1
ruditapes_c20977	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein sak1
ruditapes_c20977	positive regulation of exit from mitosis	cell cycle and proliferation	P	Protein sak1
ruditapes_c20977	positive regulation of exit from mitosis	cell organization and biogenesis	P	Protein sak1
ruditapes_c24702	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	Transcription factor SOX-2
ruditapes_c24702	glial cell fate commitment	developmental processes	P	Transcription factor SOX-2
ruditapes_c24702	osteoblast differentiation	developmental processes	P	Transcription factor SOX-2
ruditapes_c24702	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor SOX-2
ruditapes_c24702	cell cycle arrest	cell cycle and proliferation	P	Transcription factor SOX-2
ruditapes_c24702	eye development	developmental processes	P	Transcription factor SOX-2
ruditapes_c24702	negative regulation of epithelial cell proliferation	cell cycle and proliferation	P	Transcription factor SOX-2
ruditapes_c24702	negative regulation of neuron differentiation	developmental processes	P	Transcription factor SOX-2
ruditapes_c24702	endodermal cell fate specification	other biological processes	P	Transcription factor SOX-2
ruditapes_c24702	forebrain development	developmental processes	P	Transcription factor SOX-2
ruditapes_c24702	multicellular organismal development	developmental processes	P	Transcription factor SOX-2
ruditapes_c24702	response to wounding	stress response	P	Transcription factor SOX-2
ruditapes_c24702	regulation of gene expression	other metabolic processes	P	Transcription factor SOX-2
ruditapes_c24702	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor SOX-2
ruditapes_c24702	inner ear development	developmental processes	P	Transcription factor SOX-2
ruditapes_c24702	somatic stem cell maintenance	other biological processes	P	Transcription factor SOX-2
ruditapes_c24702	regulation of caspase activity	death	P	Transcription factor SOX-2
ruditapes_c24702	positive regulation of MAPKKK cascade	signal transduction	P	Transcription factor SOX-2
ruditapes_c24702	pituitary gland development	developmental processes	P	Transcription factor SOX-2
ruditapes_c24702	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor SOX-2
ruditapes_c24702	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor SOX-2
ruditapes_c13481	response to hydrogen peroxide	stress response	P	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform (PP2A-alpha) (EC 3.1.3.16)
ruditapes_c13481	negative regulation of apoptosis	death	P	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform (PP2A-alpha) (EC 3.1.3.16)
ruditapes_c13481	response to antibiotic	other biological processes	P	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform (PP2A-alpha) (EC 3.1.3.16)
ruditapes_c13481	response to chemical stimulus	other biological processes	P	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform (PP2A-alpha) (EC 3.1.3.16)
ruditapes_c13481	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform (PP2A-alpha) (EC 3.1.3.16)
ruditapes_c13481	regulation of gene expression	other metabolic processes	P	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform (PP2A-alpha) (EC 3.1.3.16)
ruditapes_c26879	electron transport chain	other metabolic processes	P	Cinnamyl alcohol dehydrogenase 4 (AtCAD4) (EC 1.1.1.195) (Cinnamyl alcohol dehydrogenase C)
ruditapes_c26879	oxidation reduction	other metabolic processes	P	Cinnamyl alcohol dehydrogenase 4 (AtCAD4) (EC 1.1.1.195) (Cinnamyl alcohol dehydrogenase C)
ruditapes_c26879	lignin biosynthetic process	other metabolic processes	P	Cinnamyl alcohol dehydrogenase 4 (AtCAD4) (EC 1.1.1.195) (Cinnamyl alcohol dehydrogenase C)
ruditapes_c5869	regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (eIF-4F 25 kDa subunit) (mRNA cap-binding protein)
ruditapes_c5869	translation	protein metabolism	P	Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (eIF-4F 25 kDa subunit) (mRNA cap-binding protein)
ruditapes_c5869	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 4E (eIF-4E) (eIF4E) (eIF-4F 25 kDa subunit) (mRNA cap-binding protein)
ruditapes2_c4067	response to DNA damage stimulus	stress response	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c3508	proteolysis	protein metabolism	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c4067	mitotic spindle organization	cell cycle and proliferation	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c4067	mitotic spindle organization	cell organization and biogenesis	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c4067	cellular process	other biological processes	P	26S protease regulatory subunit 4 (P26s4)
ruditapes_c35878	cellular process	other biological processes	P	26S protease regulatory subunit 4 (P26s4)
ruditapes_c35878	cell proliferation	cell cycle and proliferation	P	26S protease regulatory subunit 4 (P26s4)
ruditapes_c35878	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c3508	cellular process	other biological processes	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c3508	response to DNA damage stimulus	stress response	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c3508	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 4 (P26s4)
ruditapes_c35878	response to DNA damage stimulus	stress response	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c4067	mitotic spindle elongation	cell cycle and proliferation	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c4067	mitotic spindle elongation	cell organization and biogenesis	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c3508	mitotic spindle organization	cell cycle and proliferation	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c3508	mitotic spindle organization	cell organization and biogenesis	P	26S protease regulatory subunit 4 (P26s4)
ruditapes_c35878	mitotic spindle elongation	cell cycle and proliferation	P	26S protease regulatory subunit 4 (P26s4)
ruditapes_c35878	mitotic spindle elongation	cell organization and biogenesis	P	26S protease regulatory subunit 4 (P26s4)
ruditapes_c35878	proteolysis	protein metabolism	P	26S protease regulatory subunit 4 (P26s4)
ruditapes_c35878	mitotic spindle organization	cell cycle and proliferation	P	26S protease regulatory subunit 4 (P26s4)
ruditapes_c35878	mitotic spindle organization	cell organization and biogenesis	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c4067	cell proliferation	cell cycle and proliferation	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c4067	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c3508	cell proliferation	cell cycle and proliferation	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c4067	proteolysis	protein metabolism	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c3508	mitotic spindle elongation	cell cycle and proliferation	P	26S protease regulatory subunit 4 (P26s4)
ruditapes2_c3508	mitotic spindle elongation	cell organization and biogenesis	P	26S protease regulatory subunit 4 (P26s4)
ruditapes_lrc36936	fatty acid biosynthetic process	other metabolic processes	P	"Omega-3 fatty acid desaturase, chloroplastic (EC 1.14.19.-)"
ruditapes_lrc36936	lipid metabolic process	other metabolic processes	P	"Omega-3 fatty acid desaturase, chloroplastic (EC 1.14.19.-)"
ruditapes_lrc36936	lipid biosynthetic process	other metabolic processes	P	"Omega-3 fatty acid desaturase, chloroplastic (EC 1.14.19.-)"
ruditapes_lrc36936	oxidation reduction	other metabolic processes	P	"Omega-3 fatty acid desaturase, chloroplastic (EC 1.14.19.-)"
ruditapes_c14920	lipid metabolic process	other metabolic processes	P	"Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 (EC 1.14.19.-)"
ruditapes_c14920	fatty acid biosynthetic process	other metabolic processes	P	"Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 (EC 1.14.19.-)"
ruditapes_c14920	oxidation reduction	other metabolic processes	P	"Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 (EC 1.14.19.-)"
ruditapes_c14920	lipid biosynthetic process	other metabolic processes	P	"Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 (EC 1.14.19.-)"
ruditapes_c5495	G-protein coupled receptor protein signaling pathway	signal transduction	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	positive regulation of smooth muscle contraction	other biological processes	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	response to stress	stress response	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	sensory perception of pain	other biological processes	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	digestion	other biological processes	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	positive regulation of hormone secretion	cell-cell signaling	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	gastric acid secretion	transport	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	signal transduction	signal transduction	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	positive regulation of synaptic transmission	cell-cell signaling	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	eating behavior	other biological processes	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	regulation of smooth muscle contraction	other biological processes	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	neuropeptide signaling pathway	signal transduction	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	photoperiodism	other biological processes	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c5495	positive regulation of hormone secretion	transport	P	Neuromedin-U [Cleaved into: Neuromedin-U-25 (NmU-25)]
ruditapes_c29553	negative regulation of apoptosis	death	P	Nestin
ruditapes_c29553	brain development	developmental processes	P	Nestin
ruditapes_c29553	response to ionizing radiation	other biological processes	P	Nestin
ruditapes_c29553	multicellular organismal development	developmental processes	P	Nestin
ruditapes_c29553	cell projection morphogenesis	cell organization and biogenesis	P	Nestin
ruditapes_c29553	response to drug	other biological processes	P	Nestin
ruditapes_c29553	central nervous system development	developmental processes	P	Nestin
ruditapes_c29553	response to nutrient levels	other biological processes	P	Nestin
ruditapes_c29553	positive regulation of intermediate filament depolymerization	protein metabolism	P	Nestin
ruditapes_c29553	positive regulation of intermediate filament depolymerization	cell organization and biogenesis	P	Nestin
ruditapes_c29553	embryonic camera-type eye development	developmental processes	P	Nestin
ruditapes_c29553	G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	Nestin
ruditapes_c29553	nervous system development	developmental processes	P	Nestin
ruditapes_c31208	RNA metabolic process	RNA metabolism	P	Eukaryotic translation initiation factor 5 (eIF-5)
ruditapes_c31208	translation	protein metabolism	P	Eukaryotic translation initiation factor 5 (eIF-5)
ruditapes_c31208	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 5 (eIF-5)
ruditapes2_c3411	proteolysis	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c4330	"complement activation, lectin pathway"	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c4330	"complement activation, lectin pathway"	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c16604	innate immune response	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes2_c3411	complement activation	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c16604	negative regulation of complement activation	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes2_c3411	innate immune response	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes2_c3411	"complement activation, lectin pathway"	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes2_c3411	"complement activation, lectin pathway"	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c4330	proteolysis	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c16604	"complement activation, lectin pathway"	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c16604	"complement activation, lectin pathway"	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c4330	complement activation	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c4330	complement activation	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c16604	negative regulation of complement activation	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c16604	proteolysis	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c4330	negative regulation of complement activation	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c4330	negative regulation of complement activation	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes2_c3411	negative regulation of complement activation	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes2_c3411	negative regulation of complement activation	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes2_c3411	complement activation	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c16604	complement activation	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c16604	complement activation	protein metabolism	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c4330	innate immune response	stress response	P	Mannan-binding lectin serine protease 1 (EC 3.4.21.-) (Complement factor MASP-3) (Complement-activating component of Ra-reactive factor) (Mannose-binding lectin-associated serine protease 1) (MASP-1) (Mannose-binding protein-associated serine protease) (Ra-reactive factor serine protease p100) (RaRF) (Serine protease 5) [Cleaved into: Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain]
ruditapes_c6579	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	RFX-like DNA-binding protein RFX1
ruditapes_c6579	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RFX-like DNA-binding protein RFX1
ruditapes_c6579	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	RFX-like DNA-binding protein RFX1
ruditapes_c5036	regulation of cell growth	other biological processes	P	Protein NOV homolog (NovH) (CCN family member 3) (Insulin-like growth factor-binding protein 9) (IBP-9) (IGF-binding protein 9) (IGFBP-9) (Nephroblastoma-overexpressed gene protein homolog)
ruditapes_c14177	immune response	other biological processes	P	Complement component C9
ruditapes_c14177	innate immune response	stress response	P	Complement component C9
ruditapes_c14177	"complement activation, classical pathway"	stress response	P	Complement component C9
ruditapes_c14177	"complement activation, classical pathway"	protein metabolism	P	Complement component C9
ruditapes_c14177	cytolysis	death	P	Complement component C9
ruditapes_c14177	"complement activation, alternative pathway"	stress response	P	Complement component C9
ruditapes_c14177	"complement activation, alternative pathway"	protein metabolism	P	Complement component C9
ruditapes_c3725	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c3725	cell wall macromolecule catabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c3725	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c3725	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c22425	glucose metabolic process	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_c22425	carbohydrate metabolic process	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_c22425	oxidation reduction	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_c3929	transport	transport	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_c3929	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_c3929	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_c3929	aerobic respiration	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_c18961	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c18961	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c18961	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c18961	transport	transport	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c512	translation	protein metabolism	P	30S ribosomal protein S14
ruditapes_lrc37248	pentose-phosphate shunt	other metabolic processes	P	Transaldolase 2 (EC 2.2.1.2)
ruditapes_lrc37248	carbohydrate metabolic process	other metabolic processes	P	Transaldolase 2 (EC 2.2.1.2)
ruditapes_c4801	transport	transport	P	Transmembrane emp24 domain-containing protein 2 (COPI-coated vesicle membrane protein p24) (p24 family protein beta-1) (p24beta1) (Fragment)
ruditapes_c4801	negative regulation of GTPase activity	other biological processes	P	Transmembrane emp24 domain-containing protein 2 (COPI-coated vesicle membrane protein p24) (p24 family protein beta-1) (p24beta1) (Fragment)
ruditapes_c665	Golgi organization	cell organization and biogenesis	P	Transmembrane emp24 domain-containing protein 2 (COPI-coated vesicle membrane protein p24) (p24 family protein beta-1) (p24beta1) (Fragment)
ruditapes_c665	protein transport	transport	P	Transmembrane emp24 domain-containing protein 2 (COPI-coated vesicle membrane protein p24) (p24 family protein beta-1) (p24beta1) (Fragment)
ruditapes_c4801	Golgi organization	cell organization and biogenesis	P	Transmembrane emp24 domain-containing protein 2 (COPI-coated vesicle membrane protein p24) (p24 family protein beta-1) (p24beta1) (Fragment)
ruditapes_c665	vesicle-mediated transport	transport	P	Transmembrane emp24 domain-containing protein 2 (COPI-coated vesicle membrane protein p24) (p24 family protein beta-1) (p24beta1) (Fragment)
ruditapes_c665	transport	transport	P	Transmembrane emp24 domain-containing protein 2 (COPI-coated vesicle membrane protein p24) (p24 family protein beta-1) (p24beta1) (Fragment)
ruditapes_c4801	vesicle-mediated transport	transport	P	Transmembrane emp24 domain-containing protein 2 (COPI-coated vesicle membrane protein p24) (p24 family protein beta-1) (p24beta1) (Fragment)
ruditapes_c665	negative regulation of GTPase activity	other biological processes	P	Transmembrane emp24 domain-containing protein 2 (COPI-coated vesicle membrane protein p24) (p24 family protein beta-1) (p24beta1) (Fragment)
ruditapes_c4801	protein transport	transport	P	Transmembrane emp24 domain-containing protein 2 (COPI-coated vesicle membrane protein p24) (p24 family protein beta-1) (p24beta1) (Fragment)
ruditapes_c21457	sucrose metabolic process	other metabolic processes	P	Probable sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase)
ruditapes_c21457	biosynthetic process	other metabolic processes	P	Probable sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase)
ruditapes2_c351	transport	transport	P	"Triose phosphate/phosphate translocator, chloroplastic (cTPT)"
ruditapes_lrc38378	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_lrc32635	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_c1609	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes2_lrc3611	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_lrc36680	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_s40143	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes2_lrc5217	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_lrc35468	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_lrc35225	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_lrc33561	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_lrc31548	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes2_lrc5783	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_lrc36006	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes2_lrc5652	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_lrc36503	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_lrc36792	translation	protein metabolism	P	60S ribosomal protein L4 (L1)
ruditapes_c3305	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L35a
ruditapes_c3305	nematode larval development	developmental processes	P	60S ribosomal protein L35a
ruditapes_c3305	positive regulation of locomotion	other biological processes	P	60S ribosomal protein L35a
ruditapes_c3305	reproduction	other biological processes	P	60S ribosomal protein L35a
ruditapes_c3305	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes_c3305	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L35a
ruditapes_c3305	growth	other biological processes	P	60S ribosomal protein L35a
ruditapes_c18654	cell surface receptor linked signal transduction	signal transduction	P	Parathyroid hormone 2 receptor (PTH2 receptor)
ruditapes_c11349	signal transduction	signal transduction	P	Parathyroid hormone 2 receptor (PTH2 receptor)
ruditapes_c18654	G-protein coupled receptor protein signaling pathway	signal transduction	P	Parathyroid hormone 2 receptor (PTH2 receptor)
ruditapes_c11349	cell surface receptor linked signal transduction	signal transduction	P	Parathyroid hormone 2 receptor (PTH2 receptor)
ruditapes_c11349	G-protein coupled receptor protein signaling pathway	signal transduction	P	Parathyroid hormone 2 receptor (PTH2 receptor)
ruditapes_c18654	signal transduction	signal transduction	P	Parathyroid hormone 2 receptor (PTH2 receptor)
ruditapes_lrc35022	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_lrc35022	adaxial/abaxial pattern formation	developmental processes	P	60S ribosomal protein L9
ruditapes_c6740	carbohydrate metabolic process	other metabolic processes	P	"Beta-glucosidase, chloroplastic (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase)"
ruditapes_c6740	cytokinin mediated signaling	signal transduction	P	"Beta-glucosidase, chloroplastic (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase)"
ruditapes_c6740	metabolic process	other metabolic processes	P	"Beta-glucosidase, chloroplastic (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase)"
ruditapes_c10343	carbohydrate metabolic process	other metabolic processes	P	"Glucan endo-1,3-beta-glucosidase, acidic isoform (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)"
ruditapes_c10343	response to bacterium	other biological processes	P	"Glucan endo-1,3-beta-glucosidase, acidic isoform (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)"
ruditapes_c10343	"defense response to fungus, incompatible interaction"	stress response	P	"Glucan endo-1,3-beta-glucosidase, acidic isoform (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)"
ruditapes_c10343	defense response	stress response	P	"Glucan endo-1,3-beta-glucosidase, acidic isoform (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)"
ruditapes_c10343	response to salt stress	stress response	P	"Glucan endo-1,3-beta-glucosidase, acidic isoform (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)"
ruditapes_c10343	response to cold	stress response	P	"Glucan endo-1,3-beta-glucosidase, acidic isoform (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)"
ruditapes_c10343	metabolic process	other metabolic processes	P	"Glucan endo-1,3-beta-glucosidase, acidic isoform (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)"
ruditapes_c24169	oxidation reduction	other metabolic processes	P	Amine oxidase [flavin-containing] (EC 1.4.3.4) (Monoamine oxidase) (MAO)
ruditapes_c29611	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c29611	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c10240	cytokine production	other biological processes	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c10240	endocytosis	transport	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c10240	receptor-mediated endocytosis	transport	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c10240	receptor-mediated endocytosis	cell organization and biogenesis	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c10240	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c10240	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c29611	cytokine production	other biological processes	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c10240	endocytosis	cell organization and biogenesis	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c29611	endocytosis	transport	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c29611	endocytosis	cell organization and biogenesis	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c29611	receptor-mediated endocytosis	transport	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c29611	receptor-mediated endocytosis	cell organization and biogenesis	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes2_c83	proteolysis	protein metabolism	P	Mite allergen Der f 3 (EC 3.4.21.-) (Allergen Der f III) (allergen Der f 3)
ruditapes_c29872	chlorophyll biosynthetic process	other metabolic processes	P	"Glutamyl-tRNA reductase 2, chloroplastic (GluTR) (EC 1.2.1.70)"
ruditapes_c29872	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamyl-tRNA reductase 2, chloroplastic (GluTR) (EC 1.2.1.70)"
ruditapes_c29872	oxidation reduction	other metabolic processes	P	"Glutamyl-tRNA reductase 2, chloroplastic (GluTR) (EC 1.2.1.70)"
ruditapes_c29872	porphyrin biosynthetic process	other metabolic processes	P	"Glutamyl-tRNA reductase 2, chloroplastic (GluTR) (EC 1.2.1.70)"
ruditapes_c18340	carbohydrate metabolic process	other metabolic processes	P	Uncharacterized protein in mocC-mocA intergenic region (ORF293)
ruditapes_c26474	hydrogen peroxide catabolic process	stress response	P	Catalase isozyme 2 (EC 1.11.1.6)
ruditapes_c26474	hydrogen peroxide catabolic process	other metabolic processes	P	Catalase isozyme 2 (EC 1.11.1.6)
ruditapes_c26474	oxidation reduction	other metabolic processes	P	Catalase isozyme 2 (EC 1.11.1.6)
ruditapes_c26474	response to oxidative stress	stress response	P	Catalase isozyme 2 (EC 1.11.1.6)
ruditapes_c124	transport	transport	P	Nuclear autoantigenic sperm protein (NASP)
ruditapes_c124	protein transport	transport	P	Nuclear autoantigenic sperm protein (NASP)
ruditapes_c124	cell cycle	cell cycle and proliferation	P	Nuclear autoantigenic sperm protein (NASP)
ruditapes_c124	DNA replication	DNA metabolism	P	Nuclear autoantigenic sperm protein (NASP)
ruditapes_c124	cell proliferation	cell cycle and proliferation	P	Nuclear autoantigenic sperm protein (NASP)
ruditapes_c124	histone exchange	cell organization and biogenesis	P	Nuclear autoantigenic sperm protein (NASP)
ruditapes_c124	blastocyst development	developmental processes	P	Nuclear autoantigenic sperm protein (NASP)
ruditapes_c7904	glucan biosynthetic process	other metabolic processes	P	Glucosyltransferase-S (GTF-S) (EC 2.4.1.5) (Dextransucrase) (Sucrose 6-glucosyltransferase)
ruditapes_c7904	carbohydrate metabolic process	other metabolic processes	P	Glucosyltransferase-S (GTF-S) (EC 2.4.1.5) (Dextransucrase) (Sucrose 6-glucosyltransferase)
ruditapes2_c5932	translation	protein metabolism	P	40S ribosomal protein S3a (Lysine-rich protein KRP-A)
ruditapes2_c4755	translation	protein metabolism	P	40S ribosomal protein S3a (Lysine-rich protein KRP-A)
ruditapes_lrc34125	translation	protein metabolism	P	40S ribosomal protein S3a (Lysine-rich protein KRP-A)
ruditapes_lrc32951	translation	protein metabolism	P	40S ribosomal protein S3a (Lysine-rich protein KRP-A)
ruditapes_lrc35910	translation	protein metabolism	P	40S ribosomal protein S3a (Lysine-rich protein KRP-A)
ruditapes2_c5486	translation	protein metabolism	P	40S ribosomal protein S3a (Lysine-rich protein KRP-A)
ruditapes_lrc37547	translation	protein metabolism	P	40S ribosomal protein S3a (Lysine-rich protein KRP-A)
ruditapes2_c3415	translation	protein metabolism	P	40S ribosomal protein S3a (Lysine-rich protein KRP-A)
ruditapes_lrc36092	translation	protein metabolism	P	40S ribosomal protein S3a (Lysine-rich protein KRP-A)
ruditapes_lrc38278	translation	protein metabolism	P	40S ribosomal protein S3a (Lysine-rich protein KRP-A)
ruditapes2_c3046	translational elongation	protein metabolism	P	"Elongation factor Tu, mitochondrial (EF-Tu) (P43)"
ruditapes2_c2465	translational elongation	protein metabolism	P	"Elongation factor Tu, mitochondrial (EF-Tu) (P43)"
ruditapes2_c3046	GTP catabolic process	other metabolic processes	P	"Elongation factor Tu, mitochondrial (EF-Tu) (P43)"
ruditapes2_c2465	translation	protein metabolism	P	"Elongation factor Tu, mitochondrial (EF-Tu) (P43)"
ruditapes2_c2465	GTP catabolic process	other metabolic processes	P	"Elongation factor Tu, mitochondrial (EF-Tu) (P43)"
ruditapes2_c3046	translation	protein metabolism	P	"Elongation factor Tu, mitochondrial (EF-Tu) (P43)"
ruditapes_c23164	transport	transport	P	Copper transport protein CTR1 (Copper transporter 1)
ruditapes_c23164	copper ion import	transport	P	Copper transport protein CTR1 (Copper transporter 1)
ruditapes_c23164	copper ion transport	transport	P	Copper transport protein CTR1 (Copper transporter 1)
ruditapes_c23164	ion transport	transport	P	Copper transport protein CTR1 (Copper transporter 1)
ruditapes_c30245	G-protein coupled receptor protein signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M3
ruditapes2_c2459	G-protein coupled receptor protein signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M3
ruditapes2_c2459	muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M3
ruditapes_c30245	signal transduction	signal transduction	P	Muscarinic acetylcholine receptor M3
ruditapes_c30245	muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M3
ruditapes2_c2459	signal transduction	signal transduction	P	Muscarinic acetylcholine receptor M3
ruditapes_c13036	negative regulation of tumor necrosis factor production	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	"regulation of synaptic transmission, dopaminergic"	cell-cell signaling	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	behavioral response to ethanol	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	response to nicotine	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	generation of ovulation cycle rhythm	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	behavioral response to nicotine	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	positive regulation of heart rate in baroreceptor response to decreased systemic arterial blood pressure	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	regulation of inflammatory response	stress response	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	regulation of membrane potential	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	"synaptic transmission, cholinergic"	cell-cell signaling	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	endocytosis	transport	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	endocytosis	cell organization and biogenesis	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	memory	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	negative regulation of interleukin-1 beta production	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	ion transport	transport	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	response to ethanol	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	sperm motility	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	T cell activation	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	B cell activation	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	ovulation cycle	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	negative regulation of inflammatory response	stress response	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	regulation of action potential in neuron	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	response to food	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	associative learning	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	transport	transport	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	dopamine biosynthetic process	other metabolic processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	negative regulation of interleukin-6 production	other biological processes	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c13036	regulation of norepinephrine secretion	transport	P	Neuronal acetylcholine receptor subunit alpha-7
ruditapes_c10681	biosynthetic process	other metabolic processes	P	Choline-phosphate cytidylyltransferase (EC 2.7.7.15) (CTP:phosphocholine cytidylyltransferase) (CCT) (CT) (Phosphorylcholine transferase)
ruditapes_c10681	phospholipid biosynthetic process	other metabolic processes	P	Choline-phosphate cytidylyltransferase (EC 2.7.7.15) (CTP:phosphocholine cytidylyltransferase) (CCT) (CT) (Phosphorylcholine transferase)
ruditapes_c10681	CDP-choline pathway	other metabolic processes	P	Choline-phosphate cytidylyltransferase (EC 2.7.7.15) (CTP:phosphocholine cytidylyltransferase) (CCT) (CT) (Phosphorylcholine transferase)
ruditapes_lrc35434	protein amino acid dephosphorylation	protein metabolism	P	Probable protein phosphatase 2C F42G9.1 (PP2C) (EC 3.1.3.16)
ruditapes_c4154	cyclic nucleotide biosynthetic process	other metabolic processes	P	Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)
ruditapes_c4154	signal transduction	signal transduction	P	Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)
ruditapes_c4154	cAMP biosynthetic process	other metabolic processes	P	Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)
ruditapes_lrc38018	translation	protein metabolism	P	60S ribosomal protein L21 (Fragment)
ruditapes_c10061	cellular protein metabolic process	protein metabolism	P	"Alpha-mannosidase 2x (EC 3.2.1.114) (Alpha-mannosidase IIx) (Man IIx) (Mannosidase alpha class 2A member 2) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c10061	carbohydrate metabolic process	other metabolic processes	P	"Alpha-mannosidase 2x (EC 3.2.1.114) (Alpha-mannosidase IIx) (Man IIx) (Mannosidase alpha class 2A member 2) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c10061	mannose metabolic process	other metabolic processes	P	"Alpha-mannosidase 2x (EC 3.2.1.114) (Alpha-mannosidase IIx) (Man IIx) (Mannosidase alpha class 2A member 2) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c10061	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	"Alpha-mannosidase 2x (EC 3.2.1.114) (Alpha-mannosidase IIx) (Man IIx) (Mannosidase alpha class 2A member 2) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c10061	metabolic process	other metabolic processes	P	"Alpha-mannosidase 2x (EC 3.2.1.114) (Alpha-mannosidase IIx) (Man IIx) (Mannosidase alpha class 2A member 2) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c10061	post-translational protein modification	protein metabolism	P	"Alpha-mannosidase 2x (EC 3.2.1.114) (Alpha-mannosidase IIx) (Man IIx) (Mannosidase alpha class 2A member 2) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_lrc33132	translation	protein metabolism	P	60S ribosomal protein L21 (Fragment)
ruditapes_s33426	translation	protein metabolism	P	60S ribosomal protein L21 (Fragment)
ruditapes_s33164	translation	protein metabolism	P	60S ribosomal protein L21 (Fragment)
ruditapes2_lrc4244	translation	protein metabolism	P	60S ribosomal protein L21 (Fragment)
ruditapes_s37645	translation	protein metabolism	P	60S ribosomal protein L21 (Fragment)
ruditapes2_c2078	telomere tethering at nuclear periphery	cell organization and biogenesis	P	Nucleoporin NUP145 (EC 3.4.21.-) (Nuclear pore protein NUP145) [Cleaved into: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
ruditapes2_c2078	nucleocytoplasmic transport	transport	P	Nucleoporin NUP145 (EC 3.4.21.-) (Nuclear pore protein NUP145) [Cleaved into: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
ruditapes2_c2078	poly(A)+ mRNA export from nucleus	transport	P	Nucleoporin NUP145 (EC 3.4.21.-) (Nuclear pore protein NUP145) [Cleaved into: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
ruditapes2_c2078	chromosome localization	other biological processes	P	Nucleoporin NUP145 (EC 3.4.21.-) (Nuclear pore protein NUP145) [Cleaved into: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
ruditapes2_c2078	tRNA export from nucleus	transport	P	Nucleoporin NUP145 (EC 3.4.21.-) (Nuclear pore protein NUP145) [Cleaved into: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
ruditapes2_c2078	nuclear pore distribution	cell organization and biogenesis	P	Nucleoporin NUP145 (EC 3.4.21.-) (Nuclear pore protein NUP145) [Cleaved into: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
ruditapes2_c2078	transport	transport	P	Nucleoporin NUP145 (EC 3.4.21.-) (Nuclear pore protein NUP145) [Cleaved into: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
ruditapes2_c2078	mRNA transport	transport	P	Nucleoporin NUP145 (EC 3.4.21.-) (Nuclear pore protein NUP145) [Cleaved into: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
ruditapes2_c2078	protein transport	transport	P	Nucleoporin NUP145 (EC 3.4.21.-) (Nuclear pore protein NUP145) [Cleaved into: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
ruditapes_lrc32649	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase PkwA (EC 2.7.11.1)
ruditapes_lrc32649	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase PkwA (EC 2.7.11.1)
ruditapes_s36313	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-1A chain
ruditapes_s36313	microtubule-based movement	other biological processes	P	Tubulin alpha-1A chain
ruditapes_s36313	microtubule-based process	other biological processes	P	Tubulin alpha-1A chain
ruditapes_s36313	GTP catabolic process	other metabolic processes	P	Tubulin alpha-1A chain
ruditapes_c9458	Golgi vesicle transport	transport	P	Vacuolar protein sorting-associated protein 41 homolog (S53)
ruditapes_c9458	protein transport	transport	P	Vacuolar protein sorting-associated protein 41 homolog (S53)
ruditapes_c9458	vesicle-mediated transport	transport	P	Vacuolar protein sorting-associated protein 41 homolog (S53)
ruditapes_c9458	transport	transport	P	Vacuolar protein sorting-associated protein 41 homolog (S53)
ruditapes_c9458	intracellular protein transport	transport	P	Vacuolar protein sorting-associated protein 41 homolog (S53)
ruditapes_c9458	biological_process	other biological processes	P	Vacuolar protein sorting-associated protein 41 homolog (S53)
ruditapes_c2936	phosphorylation	other metabolic processes	P	Dual specificity protein kinase CLK2 (EC 2.7.12.1) (CDC-like kinase 2)
ruditapes_c2936	protein amino acid phosphorylation	protein metabolism	P	Dual specificity protein kinase CLK2 (EC 2.7.12.1) (CDC-like kinase 2)
ruditapes_c2936	regulation of RNA splicing	RNA metabolism	P	Dual specificity protein kinase CLK2 (EC 2.7.12.1) (CDC-like kinase 2)
ruditapes_c2936	protein amino acid autophosphorylation	protein metabolism	P	Dual specificity protein kinase CLK2 (EC 2.7.12.1) (CDC-like kinase 2)
ruditapes_c2936	response to ionizing radiation	other biological processes	P	Dual specificity protein kinase CLK2 (EC 2.7.12.1) (CDC-like kinase 2)
ruditapes_c2936	negative regulation of gluconeogenesis	other metabolic processes	P	Dual specificity protein kinase CLK2 (EC 2.7.12.1) (CDC-like kinase 2)
ruditapes_c21686	brain morphogenesis	developmental processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	protein amino acid autophosphorylation	protein metabolism	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	startle response	other biological processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	salivary gland cell autophagic cell death	death	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	autophagic cell death	death	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	multicellular organismal development	developmental processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	compound eye development	developmental processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	response to stimulus	other biological processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	MAPKKK cascade	signal transduction	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	salivary gland cell autophagic cell death	developmental processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	protein secretion	transport	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	visual perception	other biological processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	locomotion involved in locomotory behavior	other biological processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	sex differentiation	other biological processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	karyosome formation	cell organization and biogenesis	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	compound eye photoreceptor development	developmental processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	oogenesis	other biological processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	blastoderm segmentation	developmental processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	nervous system development	developmental processes	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c21686	"regulation of alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein darkener of apricot)
ruditapes_c14616	mitotic prometaphase	cell cycle and proliferation	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	mitotic prometaphase	cell organization and biogenesis	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	hexose transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	protein transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	protein peptidyl-prolyl isomerization	protein metabolism	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	mRNA transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	regulation of glucose transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	intracellular transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	protein folding	protein metabolism	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	viral reproduction	other biological processes	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	transmembrane transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	M phase of mitotic cell cycle	cell cycle and proliferation	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	protein import into nucleus	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	cytokine-mediated signaling pathway	signal transduction	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	carbohydrate metabolic process	other metabolic processes	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	mitotic cell cycle	cell cycle and proliferation	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	protein sumoylation	protein metabolism	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c14616	glucose transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (358 kDa nucleoporin) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (Ran-binding protein 2) (RanBP2) (p270) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c3130	negative regulation of phosphoinositide 3-kinase cascade	signal transduction	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	positive regulation of GTPase activity	other biological processes	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	response to hypoxia	stress response	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	phosphoinositide 3-kinase cascade	signal transduction	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	negative regulation of TOR signaling pathway	signal transduction	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	regulation of insulin receptor signaling pathway	signal transduction	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	negative regulation of protein kinase B signaling cascade	signal transduction	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	cell projection organization	cell organization and biogenesis	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	regulation of endocytosis	transport	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	regulation of endocytosis	cell organization and biogenesis	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	positive regulation of Rab GTPase activity	signal transduction	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	heart development	developmental processes	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	negative regulation of cell proliferation	cell cycle and proliferation	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	positive chemotaxis	other biological processes	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	insulin-like growth factor receptor signaling pathway	signal transduction	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	negative regulation of epithelial cell proliferation	cell cycle and proliferation	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	acute-phase response	stress response	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	neural tube closure	developmental processes	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	regulation of cell cycle	cell cycle and proliferation	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	negative regulation of protein kinase activity	other metabolic processes	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	establishment of protein localization	other biological processes	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	negative regulation of MAP kinase activity	other metabolic processes	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	protein homooligomerization	cell organization and biogenesis	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	protein heterooligomerization	cell organization and biogenesis	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	protein import into nucleus	transport	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	regulation of small GTPase mediated signal transduction	signal transduction	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	signal transduction	signal transduction	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	negative regulation of cell size	other biological processes	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	protein localization	other biological processes	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes_c3130	protein kinase B signaling cascade	signal transduction	P	Tuberin (Tuberous sclerosis 2 protein homolog)
ruditapes2_c1733	lipid storage	other biological processes	P	Caveolin-1
ruditapes2_c1733	negative regulation of JAK-STAT cascade	signal transduction	P	Caveolin-1
ruditapes2_c1733	inactivation of MAPK activity	signal transduction	P	Caveolin-1
ruditapes2_c1733	inactivation of MAPK activity	other metabolic processes	P	Caveolin-1
ruditapes2_c1733	skeletal muscle tissue development	developmental processes	P	Caveolin-1
ruditapes2_c1733	negative regulation of MAPKKK cascade	signal transduction	P	Caveolin-1
ruditapes2_c1733	calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes2_c1733	response to progesterone stimulus	other biological processes	P	Caveolin-1
ruditapes2_c1733	regulation of smooth muscle contraction	other biological processes	P	Caveolin-1
ruditapes2_c1733	microtubule polymerization	cell organization and biogenesis	P	Caveolin-1
ruditapes2_c1733	negative regulation of nitric oxide biosynthetic process	other metabolic processes	P	Caveolin-1
ruditapes2_c1733	cellular calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes2_c1733	protein homooligomerization	cell organization and biogenesis	P	Caveolin-1
ruditapes2_c1733	negative regulation of cell proliferation	cell cycle and proliferation	P	Caveolin-1
ruditapes2_c1733	nitric oxide homeostasis	other biological processes	P	Caveolin-1
ruditapes2_c1733	endocytosis	transport	P	Caveolin-1
ruditapes2_c1733	endocytosis	cell organization and biogenesis	P	Caveolin-1
ruditapes2_c1733	negative regulation of tyrosine phosphorylation of Stat5 protein	protein metabolism	P	Caveolin-1
ruditapes2_c1733	positive regulation of calcium ion transport into cytosol	transport	P	Caveolin-1
ruditapes2_c1733	positive regulation of microtubule polymerization	protein metabolism	P	Caveolin-1
ruditapes2_c1733	positive regulation of microtubule polymerization	cell organization and biogenesis	P	Caveolin-1
ruditapes2_c1733	response to estrogen stimulus	other biological processes	P	Caveolin-1
ruditapes2_c1733	cholesterol homeostasis	other biological processes	P	Caveolin-1
ruditapes2_c1733	cellular response to starvation	stress response	P	Caveolin-1
ruditapes2_c1733	triglyceride metabolic process	other metabolic processes	P	Caveolin-1
ruditapes2_c1733	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caveolin-1
ruditapes2_c1733	vasoconstriction	other biological processes	P	Caveolin-1
ruditapes2_c1733	negative regulation of tyrosine phosphorylation of Stat5 protein	signal transduction	P	Caveolin-1
ruditapes2_c1733	mammary gland involution	developmental processes	P	Caveolin-1
ruditapes2_c1733	positive regulation of metalloenzyme activity	other biological processes	P	Caveolin-1
ruditapes2_c1733	response to drug	other biological processes	P	Caveolin-1
ruditapes2_c1733	positive regulation of anti-apoptosis	death	P	Caveolin-1
ruditapes2_c1733	negative regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caveolin-1
ruditapes2_c1733	lactation	developmental processes	P	Caveolin-1
ruditapes2_c1733	mammary gland development	developmental processes	P	Caveolin-1
ruditapes2_c1733	negative regulation of protein binding	other biological processes	P	Caveolin-1
ruditapes2_c1733	vasculogenesis	developmental processes	P	Caveolin-1
ruditapes2_c1733	positive regulation of vasoconstriction	other biological processes	P	Caveolin-1
ruditapes2_c1733	response to glucocorticoid stimulus	other biological processes	P	Caveolin-1
ruditapes2_c1733	positive regulation of endocytosis	transport	P	Caveolin-1
ruditapes2_c1733	positive regulation of endocytosis	cell organization and biogenesis	P	Caveolin-1
ruditapes2_c1733	vesicle organization	cell organization and biogenesis	P	Caveolin-1
ruditapes2_c1733	positive regulation of signal transduction	signal transduction	P	Caveolin-1
ruditapes2_c1733	negative regulation of signal transduction	signal transduction	P	Caveolin-1
ruditapes2_c1733	negative regulation of cytokine-mediated signaling pathway	signal transduction	P	Caveolin-1
ruditapes2_c1733	membrane depolarization	other biological processes	P	Caveolin-1
ruditapes2_c1733	maintenance of protein location in cell	other biological processes	P	Caveolin-1
ruditapes2_c1733	MAPKKK cascade	signal transduction	P	Caveolin-1
ruditapes2_c1733	response to gamma radiation	other biological processes	P	Caveolin-1
ruditapes2_c1733	cytosolic calcium ion homeostasis	other biological processes	P	Caveolin-1
ruditapes2_c1733	cholesterol efflux	transport	P	Caveolin-1
ruditapes2_c1733	regulation of blood coagulation	stress response	P	Caveolin-1
ruditapes2_c1733	negative regulation of BMP signaling pathway	signal transduction	P	Caveolin-1
ruditapes2_c1733	negative regulation of epithelial cell differentiation	developmental processes	P	Caveolin-1
ruditapes2_c1733	negative regulation of MAP kinase activity	other metabolic processes	P	Caveolin-1
ruditapes2_c1733	positive regulation of peptidase activity	other biological processes	P	Caveolin-1
ruditapes2_c1733	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes2_c1733	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Caveolin-1
ruditapes2_c1733	response to calcium ion	other biological processes	P	Caveolin-1
ruditapes2_c1733	response to mechanical stimulus	other biological processes	P	Caveolin-1
ruditapes2_c1733	calcium ion transport	transport	P	Caveolin-1
ruditapes2_c1733	regulation of fatty acid metabolic process	other metabolic processes	P	Caveolin-1
ruditapes2_c1733	protein oligomerization	cell organization and biogenesis	P	Caveolin-1
ruditapes2_c1733	response to hypoxia	stress response	P	Caveolin-1
ruditapes2_c1733	response to nutrient	other biological processes	P	Caveolin-1
ruditapes2_c1733	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	Caveolin-1
ruditapes2_c1733	protein localization	other biological processes	P	Caveolin-1
ruditapes2_c1733	regulation of peptidase activity	other biological processes	P	Caveolin-1
ruditapes_c21976	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HNF-4 homolog (dHNF4) (Nuclear receptor subfamily 2 group A member 4)
ruditapes_c21976	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HNF-4 homolog (dHNF4) (Nuclear receptor subfamily 2 group A member 4)
ruditapes_c21976	lipid oxidation	other metabolic processes	P	Transcription factor HNF-4 homolog (dHNF4) (Nuclear receptor subfamily 2 group A member 4)
ruditapes_c21976	lipid catabolic process	other metabolic processes	P	Transcription factor HNF-4 homolog (dHNF4) (Nuclear receptor subfamily 2 group A member 4)
ruditapes_c21976	steroid hormone mediated signaling	signal transduction	P	Transcription factor HNF-4 homolog (dHNF4) (Nuclear receptor subfamily 2 group A member 4)
ruditapes_c21976	intracellular receptor-mediated signaling pathway	signal transduction	P	Transcription factor HNF-4 homolog (dHNF4) (Nuclear receptor subfamily 2 group A member 4)
ruditapes_c9834	ecdysone receptor-mediated signaling pathway	signal transduction	P	Ecdysone receptor (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH) (Ecdysteroid receptor) (Nuclear receptor subfamily 1 group H member 1)
ruditapes_c9834	ecdysone receptor-mediated signaling pathway	developmental processes	P	Ecdysone receptor (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH) (Ecdysteroid receptor) (Nuclear receptor subfamily 1 group H member 1)
ruditapes_c9834	steroid hormone mediated signaling	signal transduction	P	Ecdysone receptor (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH) (Ecdysteroid receptor) (Nuclear receptor subfamily 1 group H member 1)
ruditapes_c9834	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Ecdysone receptor (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH) (Ecdysteroid receptor) (Nuclear receptor subfamily 1 group H member 1)
ruditapes_c9834	"transcription, DNA-dependent"	RNA metabolism	P	Ecdysone receptor (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH) (Ecdysteroid receptor) (Nuclear receptor subfamily 1 group H member 1)
ruditapes_c24669	sulfation	other metabolic processes	P	"Estrogen sulfotransferase (EC 2.8.2.4) (EST-1) (Sulfotransferase 1E1) (ST1E1) (Sulfotransferase, estrogen-preferring)"
ruditapes_c24669	female pregnancy	other biological processes	P	"Estrogen sulfotransferase (EC 2.8.2.4) (EST-1) (Sulfotransferase 1E1) (ST1E1) (Sulfotransferase, estrogen-preferring)"
ruditapes_c24669	steroid metabolic process	other metabolic processes	P	"Estrogen sulfotransferase (EC 2.8.2.4) (EST-1) (Sulfotransferase 1E1) (ST1E1) (Sulfotransferase, estrogen-preferring)"
ruditapes_c24669	xenobiotic metabolic process	other metabolic processes	P	"Estrogen sulfotransferase (EC 2.8.2.4) (EST-1) (Sulfotransferase 1E1) (ST1E1) (Sulfotransferase, estrogen-preferring)"
ruditapes_c24669	3'-phosphoadenosine 5'-phosphosulfate metabolic process	other metabolic processes	P	"Estrogen sulfotransferase (EC 2.8.2.4) (EST-1) (Sulfotransferase 1E1) (ST1E1) (Sulfotransferase, estrogen-preferring)"
ruditapes_c24669	estrogen metabolic process	other metabolic processes	P	"Estrogen sulfotransferase (EC 2.8.2.4) (EST-1) (Sulfotransferase 1E1) (ST1E1) (Sulfotransferase, estrogen-preferring)"
ruditapes_c24785	cell cycle	cell cycle and proliferation	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	base-excision repair	stress response	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	base-excision repair	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	spermatogenesis	other biological processes	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	V(D)J recombination	developmental processes	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	V(D)J recombination	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	reciprocal meiotic recombination	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	DNA recombination	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	DNA replication	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	response to DNA damage stimulus	stress response	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	DNA ligation	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	cell division	other biological processes	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	DNA ligation during DNA repair	stress response	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	DNA ligation during DNA repair	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	DNA repair	stress response	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	DNA repair	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c24785	reciprocal meiotic recombination	cell cycle and proliferation	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c26518	transport	transport	P	Corticosteroid-binding globulin (CBG) (Serpin A6) (Transcortin)
ruditapes_c31074	spore germination	other biological processes	P	Spore germination protein KA
ruditapes_c12109	protein transport	transport	P	Protein translocase subunit SecY (Protein transport protein SEC61 subunit alpha homolog)
ruditapes_c12109	transport	transport	P	Protein translocase subunit SecY (Protein transport protein SEC61 subunit alpha homolog)
ruditapes_c17681	behavior	other biological processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	brain development	developmental processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	inflammatory response	stress response	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	negative regulation of nerve growth factor receptor signaling pathway	signal transduction	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	signal transduction	signal transduction	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	nitric oxide mediated signal transduction	signal transduction	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	protein kinase cascade	signal transduction	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	positive regulation of nitric-oxide synthase activity	other biological processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	negative regulation of signal transduction	signal transduction	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	negative regulation of blood vessel endothelial cell migration	other biological processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	vasodilation by angiotensin involved in regulation of systemic arterial blood pressure	other biological processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	brain renin-angiotensin system	other biological processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	cell surface receptor linked signal transduction	signal transduction	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	"G-protein signaling, coupled to cGMP nucleotide second messenger"	signal transduction	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	negative regulation of heart rate	other biological processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	positive regulation of vasodilation	other biological processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	negative regulation of cell growth	other biological processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	blood vessel remodeling	developmental processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	G-protein coupled receptor protein signaling pathway	signal transduction	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	positive regulation of phosphoprotein phosphatase activity	other metabolic processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	regulation of blood pressure	other biological processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	regulation of systemic arterial blood pressure by circulatory renin-angiotensin	other biological processes	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c17681	positive regulation of apoptosis	death	P	Type-2 angiotensin II receptor (Angiotensin II type-2 receptor) (AT2)
ruditapes_c3861	signal transduction	signal transduction	P	Prostaglandin E2 receptor EP3 subtype (PGE receptor EP3 subtype) (PGE2 receptor EP3 subtype) (Prostanoid EP3 receptor)
ruditapes_c3861	G-protein coupled receptor protein signaling pathway	signal transduction	P	Prostaglandin E2 receptor EP3 subtype (PGE receptor EP3 subtype) (PGE2 receptor EP3 subtype) (Prostanoid EP3 receptor)
ruditapes_c20367	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 4 (G-protein coupled receptor 19)
ruditapes_c20367	signal transduction	signal transduction	P	G-protein coupled receptor 4 (G-protein coupled receptor 19)
ruditapes2_c116	metabolic process	other metabolic processes	P	Tropinone reductase 2 (EC 1.1.1.236) (Tropinone reductase II) (TR-II)
ruditapes2_c116	oxidation reduction	other metabolic processes	P	Tropinone reductase 2 (EC 1.1.1.236) (Tropinone reductase II) (TR-II)
ruditapes_c16135	oxidation reduction	other metabolic processes	P	Retinol dehydrogenase 2 (EC 1.1.1.105) (29 kDa protein) (Retinol dehydrogenase type II) (RODH II)
ruditapes_c16135	metabolic process	other metabolic processes	P	Retinol dehydrogenase 2 (EC 1.1.1.105) (29 kDa protein) (Retinol dehydrogenase type II) (RODH II)
ruditapes_c16135	retinoic acid metabolic process	other metabolic processes	P	Retinol dehydrogenase 2 (EC 1.1.1.105) (29 kDa protein) (Retinol dehydrogenase type II) (RODH II)
ruditapes_c16135	retinol metabolic process	other metabolic processes	P	Retinol dehydrogenase 2 (EC 1.1.1.105) (29 kDa protein) (Retinol dehydrogenase type II) (RODH II)
ruditapes_c33135	lipid metabolic process	other metabolic processes	P	NADP-dependent 7-alpha-hydroxysteroid dehydrogenase (7-alpha-HSDH) (EC 1.1.1.-) (Bile acid 7-dehydroxylase)
ruditapes_c33135	metabolic process	other metabolic processes	P	NADP-dependent 7-alpha-hydroxysteroid dehydrogenase (7-alpha-HSDH) (EC 1.1.1.-) (Bile acid 7-dehydroxylase)
ruditapes_c33135	bile acid catabolic process	other metabolic processes	P	NADP-dependent 7-alpha-hydroxysteroid dehydrogenase (7-alpha-HSDH) (EC 1.1.1.-) (Bile acid 7-dehydroxylase)
ruditapes_c33135	oxidation reduction	other metabolic processes	P	NADP-dependent 7-alpha-hydroxysteroid dehydrogenase (7-alpha-HSDH) (EC 1.1.1.-) (Bile acid 7-dehydroxylase)
ruditapes_c33135	steroid metabolic process	other metabolic processes	P	NADP-dependent 7-alpha-hydroxysteroid dehydrogenase (7-alpha-HSDH) (EC 1.1.1.-) (Bile acid 7-dehydroxylase)
ruditapes_c21958	steroid metabolic process	other metabolic processes	P	Sulfotransferase 1A2 (ST1A2) (EC 2.8.2.1) (Aryl sulfotransferase 2) (Phenol sulfotransferase 2) (Phenol-sulfating phenol sulfotransferase 2) (P-PST 2)
ruditapes_c21958	3'-phosphoadenosine 5'-phosphosulfate metabolic process	other metabolic processes	P	Sulfotransferase 1A2 (ST1A2) (EC 2.8.2.1) (Aryl sulfotransferase 2) (Phenol sulfotransferase 2) (Phenol-sulfating phenol sulfotransferase 2) (P-PST 2)
ruditapes_c21958	sulfation	other metabolic processes	P	Sulfotransferase 1A2 (ST1A2) (EC 2.8.2.1) (Aryl sulfotransferase 2) (Phenol sulfotransferase 2) (Phenol-sulfating phenol sulfotransferase 2) (P-PST 2)
ruditapes_c21958	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase 1A2 (ST1A2) (EC 2.8.2.1) (Aryl sulfotransferase 2) (Phenol sulfotransferase 2) (Phenol-sulfating phenol sulfotransferase 2) (P-PST 2)
ruditapes_c21958	catecholamine metabolic process	other metabolic processes	P	Sulfotransferase 1A2 (ST1A2) (EC 2.8.2.1) (Aryl sulfotransferase 2) (Phenol sulfotransferase 2) (Phenol-sulfating phenol sulfotransferase 2) (P-PST 2)
ruditapes_c21958	amine biosynthetic process	other metabolic processes	P	Sulfotransferase 1A2 (ST1A2) (EC 2.8.2.1) (Aryl sulfotransferase 2) (Phenol sulfotransferase 2) (Phenol-sulfating phenol sulfotransferase 2) (P-PST 2)
ruditapes_c21958	lipid metabolic process	other metabolic processes	P	Sulfotransferase 1A2 (ST1A2) (EC 2.8.2.1) (Aryl sulfotransferase 2) (Phenol sulfotransferase 2) (Phenol-sulfating phenol sulfotransferase 2) (P-PST 2)
ruditapes_c31996	immune response	other biological processes	P	C-C motif chemokine 4 (Macrophage inflammatory protein 1-beta) (MIP-1-beta) (Small-inducible cytokine A4)
ruditapes_c31996	positive regulation of tumor necrosis factor production	other biological processes	P	C-C motif chemokine 4 (Macrophage inflammatory protein 1-beta) (MIP-1-beta) (Small-inducible cytokine A4)
ruditapes_c31996	positive regulation of vascular permeability	other biological processes	P	C-C motif chemokine 4 (Macrophage inflammatory protein 1-beta) (MIP-1-beta) (Small-inducible cytokine A4)
ruditapes_c31996	inflammatory response	stress response	P	C-C motif chemokine 4 (Macrophage inflammatory protein 1-beta) (MIP-1-beta) (Small-inducible cytokine A4)
ruditapes_c31996	leukocyte chemotaxis	other biological processes	P	C-C motif chemokine 4 (Macrophage inflammatory protein 1-beta) (MIP-1-beta) (Small-inducible cytokine A4)
ruditapes_c31996	chemotaxis	other biological processes	P	C-C motif chemokine 4 (Macrophage inflammatory protein 1-beta) (MIP-1-beta) (Small-inducible cytokine A4)
ruditapes_lrc32593	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes2_lrc5615	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_lrc32828	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_s36624	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_lrc12476	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_lrc38022	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes2_lrc5034	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_s39063	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes2_lrc7229	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_lrc33723	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_s39496	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes2_lrc5923	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes2_lrc4986	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_lrc32707	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_lrc33902	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_lrc38408	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_lrc38487	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_lrc33531	cell proliferation	cell cycle and proliferation	P	Cysteine-rich protein 1 (CRP-1) (Cysteine-rich heart protein) (CRHP) (hCRHP) (Cysteine-rich intestinal protein) (CRIP)
ruditapes_c23885	response to oxidative stress	stress response	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to nutrient	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to radiation	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	cell growth	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	ossification	developmental processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to lipopolysaccharide	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to organic substance	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to retinoic acid	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to heat	stress response	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	collagen catabolic process	other metabolic processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	tissue remodeling	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to estradiol stimulus	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to ethanol	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	proteolysis	protein metabolism	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to drug	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to nicotine	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to vitamin A	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	transformation of host cell by virus	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to hypoxia	stress response	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to mechanical stimulus	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	anatomical structure regression	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to hyperoxia	stress response	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to organic cyclic substance	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	response to tumor necrosis factor	other biological processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	positive regulation of angiogenesis	developmental processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	metabolic process	other metabolic processes	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c23885	positive regulation of synaptic plasticity	cell-cell signaling	P	Matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) (92 kDa gelatinase) (92 kDa type IV collagenase) (Gelatinase B) (GELB)
ruditapes_c29895	hermaphrodite genitalia development	developmental processes	P	Probable S-adenosylmethionine synthase 4 (AdoMet synthase 4) (EC 2.5.1.6) (Methionine adenosyltransferase 4) (MAT 4)
ruditapes_c29895	lipid storage	other biological processes	P	Probable S-adenosylmethionine synthase 4 (AdoMet synthase 4) (EC 2.5.1.6) (Methionine adenosyltransferase 4) (MAT 4)
ruditapes_c29895	positive regulation of growth rate	other biological processes	P	Probable S-adenosylmethionine synthase 4 (AdoMet synthase 4) (EC 2.5.1.6) (Methionine adenosyltransferase 4) (MAT 4)
ruditapes_c29895	reproduction	other biological processes	P	Probable S-adenosylmethionine synthase 4 (AdoMet synthase 4) (EC 2.5.1.6) (Methionine adenosyltransferase 4) (MAT 4)
ruditapes_c29895	positive regulation of locomotion	other biological processes	P	Probable S-adenosylmethionine synthase 4 (AdoMet synthase 4) (EC 2.5.1.6) (Methionine adenosyltransferase 4) (MAT 4)
ruditapes_c29895	S-adenosylmethionine biosynthetic process	other metabolic processes	P	Probable S-adenosylmethionine synthase 4 (AdoMet synthase 4) (EC 2.5.1.6) (Methionine adenosyltransferase 4) (MAT 4)
ruditapes_c29895	secretion by cell	transport	P	Probable S-adenosylmethionine synthase 4 (AdoMet synthase 4) (EC 2.5.1.6) (Methionine adenosyltransferase 4) (MAT 4)
ruditapes_c29895	locomotion	other biological processes	P	Probable S-adenosylmethionine synthase 4 (AdoMet synthase 4) (EC 2.5.1.6) (Methionine adenosyltransferase 4) (MAT 4)
ruditapes_c29895	one-carbon compound metabolic process	other metabolic processes	P	Probable S-adenosylmethionine synthase 4 (AdoMet synthase 4) (EC 2.5.1.6) (Methionine adenosyltransferase 4) (MAT 4)
ruditapes_c19451	tryptophan metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c19451	cellular amino acid biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c19451	metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c19451	tryptophan biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c19451	aromatic amino acid family biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c18164	metabolic process	other metabolic processes	P	Arylsulfatase B (ASB) (EC 3.1.6.12) (N-acetylgalactosamine-4-sulfatase) (G4S)
ruditapes2_c1016	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c1016	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c1016	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c1016	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c1016	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c1016	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c1016	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39389	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s40355	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39395	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_c477	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3127	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc25075	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3127	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc25075	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3298	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3172	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39389	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3172	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc17267	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc34457	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_c477	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3172	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s40355	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc34457	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c7455	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc17267	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39389	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc35374	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3127	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3554	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3477	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39395	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s40355	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc35374	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39395	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39395	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3477	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc36789	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3298	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3477	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc17267	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3822	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3298	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s40355	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc17267	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_c477	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3477	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c7455	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc25075	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3822	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s40355	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_c477	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc36789	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3554	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3822	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_c477	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c7455	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc25075	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3822	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc35374	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3127	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc34457	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc36789	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc25075	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc35374	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc17267	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc34457	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3477	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3554	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39389	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc35374	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3822	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39389	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3554	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39395	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3172	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3298	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc25075	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc17267	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc36789	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3554	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c7455	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3554	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc25075	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc34457	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3477	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3298	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc34457	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3822	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3127	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c7455	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc35374	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39395	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3172	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc36789	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3127	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3172	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc34457	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc17267	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s40355	blood vessel remodeling	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_c477	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3298	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c7455	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39389	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3822	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39395	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_c7455	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3298	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc35374	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc36789	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_lrc36789	muscle organ development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3554	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s39389	cardiac muscle tissue development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_s40355	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3127	regulation of the force of heart contraction	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3477	cellular calcium ion homeostasis	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_c477	multicellular organismal development	developmental processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes2_lrc3172	cell differentiation	other biological processes	P	"Cysteine and glycine-rich protein 3 (Cysteine-rich protein 3) (CRP3) (LIM domain protein, cardiac) (Muscle LIM protein)"
ruditapes_c28339	defense response to fungus	stress response	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	positive regulation of BMP signaling pathway	signal transduction	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	multicellular organismal development	developmental processes	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	protein amino acid phosphorylation	protein metabolism	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	oviposition	other biological processes	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	positive regulation of multicellular organism growth	other biological processes	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	nematode larval development	developmental processes	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	innate immune response	stress response	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	positive regulation of RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	negative regulation of BMP signaling pathway	signal transduction	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	dauer larval development	developmental processes	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	phosphorylation	other metabolic processes	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c28339	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Cell surface receptor daf-4 (EC 2.7.11.30) (Abnormal dauer formation protein 4)
ruditapes_c3186	"transcription, DNA-dependent"	RNA metabolism	P	Max dimerization protein 1 (Max dimerizer 1) (Protein MAD)
ruditapes_c3186	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Max dimerization protein 1 (Max dimerizer 1) (Protein MAD)
ruditapes_c2216	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Max dimerization protein 1 (Max dimerizer 1) (Protein MAD)
ruditapes_c2216	"transcription, DNA-dependent"	RNA metabolism	P	Max dimerization protein 1 (Max dimerizer 1) (Protein MAD)
ruditapes_c27090	"transcription, DNA-dependent"	RNA metabolism	P	Max-interacting protein 1 (Max interactor 1) (Class C basic helix-loop-helix protein 11) (bHLHc11)
ruditapes_c27090	cytoplasmic sequestering of transcription factor	transport	P	Max-interacting protein 1 (Max interactor 1) (Class C basic helix-loop-helix protein 11) (bHLHc11)
ruditapes_c27090	negative regulation of cell proliferation	cell cycle and proliferation	P	Max-interacting protein 1 (Max interactor 1) (Class C basic helix-loop-helix protein 11) (bHLHc11)
ruditapes_c27090	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Max-interacting protein 1 (Max interactor 1) (Class C basic helix-loop-helix protein 11) (bHLHc11)
ruditapes_c15011	cellular process	other biological processes	P	Methionine aminopeptidase 2 (MAP 2) (MetAP 2) (EC 3.4.11.18) (Initiation factor 2-associated 67 kDa glycoprotein) (Peptidase M 2) (p67eIF2) (p67)
ruditapes_c15011	proteolysis	protein metabolism	P	Methionine aminopeptidase 2 (MAP 2) (MetAP 2) (EC 3.4.11.18) (Initiation factor 2-associated 67 kDa glycoprotein) (Peptidase M 2) (p67eIF2) (p67)
ruditapes_c15011	protein processing	protein metabolism	P	Methionine aminopeptidase 2 (MAP 2) (MetAP 2) (EC 3.4.11.18) (Initiation factor 2-associated 67 kDa glycoprotein) (Peptidase M 2) (p67eIF2) (p67)
ruditapes_c15011	N-terminal protein amino acid modification	protein metabolism	P	Methionine aminopeptidase 2 (MAP 2) (MetAP 2) (EC 3.4.11.18) (Initiation factor 2-associated 67 kDa glycoprotein) (Peptidase M 2) (p67eIF2) (p67)
ruditapes_c15011	peptidyl-methionine modification	protein metabolism	P	Methionine aminopeptidase 2 (MAP 2) (MetAP 2) (EC 3.4.11.18) (Initiation factor 2-associated 67 kDa glycoprotein) (Peptidase M 2) (p67eIF2) (p67)
ruditapes_c30403	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Proliferation-associated protein 2G4 (IRES-specific cellular trans-acting factor 45 kDa) (ITAF45) (Mpp1) (Proliferation-associated protein 1) (Protein p38-2G4)
ruditapes_c30403	regulation of translation	protein metabolism	P	Proliferation-associated protein 2G4 (IRES-specific cellular trans-acting factor 45 kDa) (ITAF45) (Mpp1) (Proliferation-associated protein 1) (Protein p38-2G4)
ruditapes_c30403	rRNA processing	RNA metabolism	P	Proliferation-associated protein 2G4 (IRES-specific cellular trans-acting factor 45 kDa) (ITAF45) (Mpp1) (Proliferation-associated protein 1) (Protein p38-2G4)
ruditapes_c30403	"transcription, DNA-dependent"	RNA metabolism	P	Proliferation-associated protein 2G4 (IRES-specific cellular trans-acting factor 45 kDa) (ITAF45) (Mpp1) (Proliferation-associated protein 1) (Protein p38-2G4)
ruditapes_c30403	cellular process	other biological processes	P	Proliferation-associated protein 2G4 (IRES-specific cellular trans-acting factor 45 kDa) (ITAF45) (Mpp1) (Proliferation-associated protein 1) (Protein p38-2G4)
ruditapes_c12845	apoptosis	death	P	Tumor necrosis factor ligand superfamily member 10 (TNF-related apoptosis-inducing ligand) (Protein TRAIL) (CD antigen CD253)
ruditapes_c12845	immune response	other biological processes	P	Tumor necrosis factor ligand superfamily member 10 (TNF-related apoptosis-inducing ligand) (Protein TRAIL) (CD antigen CD253)
ruditapes_c12845	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Tumor necrosis factor ligand superfamily member 10 (TNF-related apoptosis-inducing ligand) (Protein TRAIL) (CD antigen CD253)
ruditapes_c19972	inductive cell migration	other biological processes	P	Probable syndecan
ruditapes_c19972	nematode larval development	developmental processes	P	Probable syndecan
ruditapes_c19972	embryonic development ending in birth or egg hatching	developmental processes	P	Probable syndecan
ruditapes_c19972	epidermis morphogenesis	developmental processes	P	Probable syndecan
ruditapes2_c3672	response to manganese ion	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	positive regulation of calcium ion transport	transport	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	response to vitamin B1	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	negative regulation of glial cell proliferation	cell cycle and proliferation	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	response to stress	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	response to vitamin B1	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	negative regulation of nitric oxide biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	response to drug	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	positive regulation of apoptosis	death	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	negative regulation of glial cell proliferation	cell cycle and proliferation	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	negative regulation of glial cell proliferation	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	positive regulation of glial cell proliferation	cell cycle and proliferation	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	positive regulation of glial cell proliferation	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	response to progesterone stimulus	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	steroid biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	positive regulation of mitochondrial depolarization	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	positive regulation of glial cell proliferation	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	response to testosterone stimulus	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	response to progesterone stimulus	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	response to manganese ion	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	response to stress	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	response to axon injury	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	positive regulation of mitochondrial depolarization	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	contact inhibition	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	negative regulation of nitric oxide biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	positive regulation of glial cell proliferation	cell cycle and proliferation	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	adrenal gland development	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	axon regeneration in the peripheral nervous system	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	axon regeneration in the peripheral nervous system	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	axon regeneration in the peripheral nervous system	cell organization and biogenesis	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	response to progesterone stimulus	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	axon regeneration in the peripheral nervous system	cell organization and biogenesis	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	negative regulation of tumor necrosis factor production	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	positive regulation of calcium ion transport	transport	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	response to drug	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	negative regulation of nitric oxide biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	positive regulation of glial cell proliferation	cell cycle and proliferation	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	positive regulation of glial cell proliferation	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	aging	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	regulation of steroid biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	axon regeneration in the peripheral nervous system	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	axon regeneration in the peripheral nervous system	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	axon regeneration in the peripheral nervous system	cell organization and biogenesis	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	positive regulation of mitochondrial depolarization	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	contact inhibition	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	positive regulation of necrotic cell death	death	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	response to axon injury	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	glial cell migration	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	response to axon injury	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	behavioral response to pain	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	axon regeneration in the peripheral nervous system	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	axon regeneration in the peripheral nervous system	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	response to manganese ion	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	glial cell migration	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	response to drug	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	response to stress	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	response to pain	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	response to stress	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	response to pain	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	steroid biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	negative regulation of glial cell proliferation	cell cycle and proliferation	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	negative regulation of glial cell proliferation	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	response to testosterone stimulus	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	positive regulation of apoptosis	death	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	positive regulation of calcium ion transport	transport	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	behavioral response to pain	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	response to vitamin B1	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	steroid biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	adrenal gland development	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	positive regulation of glial cell proliferation	cell cycle and proliferation	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	positive regulation of glial cell proliferation	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	positive regulation of mitochondrial depolarization	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	regulation of steroid biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	response to testosterone stimulus	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	negative regulation of tumor necrosis factor production	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	response to manganese ion	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	response to vitamin B1	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	contact inhibition	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	response to drug	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	negative regulation of nitric oxide biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	negative regulation of tumor necrosis factor production	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	positive regulation of calcium ion transport	transport	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	negative regulation of glial cell proliferation	cell cycle and proliferation	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	negative regulation of glial cell proliferation	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	axon regeneration in the peripheral nervous system	cell organization and biogenesis	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	adrenal gland development	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	negative regulation of tumor necrosis factor production	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	regulation of steroid biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	response to testosterone stimulus	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	response to pain	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	adrenal gland development	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	positive regulation of necrotic cell death	death	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	behavioral response to pain	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	contact inhibition	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	axon regeneration in the peripheral nervous system	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	axon regeneration in the peripheral nervous system	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	response to progesterone stimulus	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes_c36652	response to axon injury	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	aging	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	positive regulation of apoptosis	death	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	positive regulation of apoptosis	death	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	positive regulation of necrotic cell death	death	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	behavioral response to pain	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	regulation of steroid biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	steroid biosynthetic process	other metabolic processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	positive regulation of necrotic cell death	death	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	aging	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	aging	other biological processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3222	negative regulation of glial cell proliferation	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	response to pain	stress response	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c3672	glial cell migration	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c1270	glial cell migration	developmental processes	P	Translocator protein (Mitochondrial benzodiazepine receptor) (PKBS) (Peripheral-type benzodiazepine receptor) (PBR)
ruditapes2_c462	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c462	aerobic respiration	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_c60	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c942	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c1885	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_c60	transport	transport	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_lrc21103	transport	transport	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c942	transport	transport	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_lrc21103	aerobic respiration	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_lrc21103	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c942	aerobic respiration	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c462	transport	transport	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c942	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_c60	aerobic respiration	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_lrc21103	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c462	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c1885	transport	transport	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c1885	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_c60	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c1885	aerobic respiration	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_s40373	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain
ruditapes_s40373	microtubule-based movement	other biological processes	P	Tubulin alpha chain
ruditapes_s40373	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain
ruditapes_s40373	microtubule-based process	other biological processes	P	Tubulin alpha chain
ruditapes_c31719	DNA replication	DNA metabolism	P	Replication protein E1 (EC 3.6.4.12)
ruditapes2_c1761	DNA replication	DNA metabolism	P	Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1)
ruditapes_c14722	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Regulatory protein E2
ruditapes_c14722	viral reproduction	other biological processes	P	Regulatory protein E2
ruditapes_c14722	regulation of DNA replication	DNA metabolism	P	Regulatory protein E2
ruditapes_c4640	interspecies interaction between organisms	other biological processes	P	Minor capsid protein L2
ruditapes_s39352	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L9
ruditapes_s39352	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L9
ruditapes_s36828	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L9
ruditapes_s36828	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L9
ruditapes_s39352	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_s39352	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L9
ruditapes_s36828	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_s36828	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L9
ruditapes_s36828	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L9
ruditapes_s39352	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L9
ruditapes_c27821	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit M (EC 1.6.99.5) (NADH dehydrogenase I subunit M) (NDH-1 subunit M)
ruditapes_c27821	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-quinone oxidoreductase subunit M (EC 1.6.99.5) (NADH dehydrogenase I subunit M) (NDH-1 subunit M)
ruditapes_c27821	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	NADH-quinone oxidoreductase subunit M (EC 1.6.99.5) (NADH dehydrogenase I subunit M) (NDH-1 subunit M)
ruditapes_c12891	lactose catabolic process via tagatose-6-phosphate	other metabolic processes	P	6-phospho-beta-galactosidase (EC 3.2.1.85) (Beta-D-phosphogalactoside galactohydrolase) (PGALase) (P-beta-Gal) (PBG)
ruditapes_c12891	metabolic process	other metabolic processes	P	6-phospho-beta-galactosidase (EC 3.2.1.85) (Beta-D-phosphogalactoside galactohydrolase) (PGALase) (P-beta-Gal) (PBG)
ruditapes_c12891	carbohydrate metabolic process	other metabolic processes	P	6-phospho-beta-galactosidase (EC 3.2.1.85) (Beta-D-phosphogalactoside galactohydrolase) (PGALase) (P-beta-Gal) (PBG)
ruditapes_c2659	lactose catabolic process via tagatose-6-phosphate	other metabolic processes	P	6-phospho-beta-galactosidase (EC 3.2.1.85) (Beta-D-phosphogalactoside galactohydrolase) (PGALase) (P-beta-Gal) (PBG)
ruditapes_c2659	carbohydrate metabolic process	other metabolic processes	P	6-phospho-beta-galactosidase (EC 3.2.1.85) (Beta-D-phosphogalactoside galactohydrolase) (PGALase) (P-beta-Gal) (PBG)
ruditapes_c2659	metabolic process	other metabolic processes	P	6-phospho-beta-galactosidase (EC 3.2.1.85) (Beta-D-phosphogalactoside galactohydrolase) (PGALase) (P-beta-Gal) (PBG)
ruditapes_c14617	G-protein coupled receptor protein signaling pathway	signal transduction	P	Melatonin receptor type 1B (Mel-1B-R) (Mel1b receptor) (Fragment)
ruditapes_c14617	signal transduction	signal transduction	P	Melatonin receptor type 1B (Mel-1B-R) (Mel1b receptor) (Fragment)
ruditapes_lrc38141	photosynthesis	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_lrc38141	tricarboxylic acid cycle	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_lrc38141	metabolic process	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_lrc38141	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_c6575	phosphate metabolic process	other metabolic processes	P	Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase)
ruditapes_c11558	flavonoid biosynthetic process	other metabolic processes	P	Leucoanthocyanidin dioxygenase (LDOX) (Leucocyanidin oxygenase) (EC 1.14.11.19) (Leucoanthocyanidin hydroxylase)
ruditapes_c11558	oxidation reduction	other metabolic processes	P	Leucoanthocyanidin dioxygenase (LDOX) (Leucocyanidin oxygenase) (EC 1.14.11.19) (Leucoanthocyanidin hydroxylase)
ruditapes_s37856	cellular metabolic process	other metabolic processes	P	Dihydroflavonol-4-reductase (DFR) (EC 1.1.1.219) (Dihydrokaempferol 4-reductase)
ruditapes_s37856	flavonoid biosynthetic process	other metabolic processes	P	Dihydroflavonol-4-reductase (DFR) (EC 1.1.1.219) (Dihydrokaempferol 4-reductase)
ruditapes_s37856	oxidation reduction	other metabolic processes	P	Dihydroflavonol-4-reductase (DFR) (EC 1.1.1.219) (Dihydrokaempferol 4-reductase)
ruditapes_c8130	nitrogen compound metabolic process	other metabolic processes	P	Glutamine synthetase (GS) (EC 6.3.1.2) (Glutamate decarboxylase) (EC 4.1.1.15) (Glutamate--ammonia ligase)
ruditapes_c8130	glutamine biosynthetic process	other metabolic processes	P	Glutamine synthetase (GS) (EC 6.3.1.2) (Glutamate decarboxylase) (EC 4.1.1.15) (Glutamate--ammonia ligase)
ruditapes_c8942	phosphorylation	other metabolic processes	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	regulation of transcription during G2/M-phase of mitotic cell cycle	RNA metabolism	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	regulation of JAK-STAT cascade	signal transduction	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	transcriptional preinitiation complex assembly	RNA metabolism	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	transcriptional preinitiation complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	positive regulation of transcription initiation from RNA polymerase II promoter	RNA metabolism	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	positive regulation of transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	histone acetylation	protein metabolism	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	histone acetylation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c8942	regulation of transcription during G2/M-phase of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (TAFII250) (TBP-associated factor 230 kDa) (p230) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230)
ruditapes_c4423	transport	transport	P	Ras-related protein Rab-9A
ruditapes_c4423	GTP catabolic process	other metabolic processes	P	Ras-related protein Rab-9A
ruditapes_c4423	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-9A
ruditapes_c4423	protein transport	transport	P	Ras-related protein Rab-9A
ruditapes_c4423	positive regulation of exocytosis	transport	P	Ras-related protein Rab-9A
ruditapes_c18047	visual perception	other biological processes	P	Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B) (Retinal guanylyl cyclase activator protein p24)
ruditapes_c18047	response to stimulus	other biological processes	P	Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B) (Retinal guanylyl cyclase activator protein p24)
ruditapes_lrc35004	carbohydrate transport	transport	P	PTS system sucrose-specific EIIBC component (EIIBC-Scr) (EII-Scr) [Includes: Sucrose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system sucrose-specific EIIB component); Sucrose permease IIC component (PTS system sucrose-specific EIIC component)]
ruditapes_lrc35004	transport	transport	P	PTS system sucrose-specific EIIBC component (EIIBC-Scr) (EII-Scr) [Includes: Sucrose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system sucrose-specific EIIB component); Sucrose permease IIC component (PTS system sucrose-specific EIIC component)]
ruditapes_lrc35004	phosphoenolpyruvate-dependent sugar phosphotransferase system	signal transduction	P	PTS system sucrose-specific EIIBC component (EIIBC-Scr) (EII-Scr) [Includes: Sucrose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system sucrose-specific EIIB component); Sucrose permease IIC component (PTS system sucrose-specific EIIC component)]
ruditapes_lrc35004	phosphoenolpyruvate-dependent sugar phosphotransferase system	transport	P	PTS system sucrose-specific EIIBC component (EIIBC-Scr) (EII-Scr) [Includes: Sucrose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system sucrose-specific EIIB component); Sucrose permease IIC component (PTS system sucrose-specific EIIC component)]
ruditapes_lrc35004	phosphorylation	other metabolic processes	P	PTS system sucrose-specific EIIBC component (EIIBC-Scr) (EII-Scr) [Includes: Sucrose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system sucrose-specific EIIB component); Sucrose permease IIC component (PTS system sucrose-specific EIIC component)]
ruditapes_c1999	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes2_c1948	protein transport	transport	P	Probable protein-export membrane protein secG
ruditapes2_c1948	transport	transport	P	Probable protein-export membrane protein secG
ruditapes2_c1948	protein secretion	transport	P	Probable protein-export membrane protein secG
ruditapes_c19863	tRNA processing	RNA metabolism	P	"tRNA(Ile)-lysidine synthase, chloroplastic (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase)"
ruditapes_c5202	autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc32349	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc33048	cellular response to amino acid starvation	stress response	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc33048	autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes_c5202	cellular response to amino acid starvation	stress response	P	Death-associated protein 1 (DAP-1)
ruditapes_c25615	cellular response to amino acid starvation	stress response	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc32349	activation of caspase activity	death	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc32349	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes_c5202	induction of apoptosis by extracellular signals	death	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc35341	activation of caspase activity	death	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc33048	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc32349	autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc35341	autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes_c25615	autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes_c5202	negative regulation of autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes_c25615	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc33048	negative regulation of autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc35341	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc35341	cellular response to amino acid starvation	stress response	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc35341	apoptosis	death	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc32349	negative regulation of autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes_c25615	activation of caspase activity	death	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc33048	induction of apoptosis by extracellular signals	death	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc32349	induction of apoptosis by extracellular signals	death	P	Death-associated protein 1 (DAP-1)
ruditapes_c25615	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc32349	apoptosis	death	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc35341	negative regulation of autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc33048	apoptosis	death	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc33048	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes_c25615	induction of apoptosis by extracellular signals	death	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc32349	cellular response to amino acid starvation	stress response	P	Death-associated protein 1 (DAP-1)
ruditapes_c5202	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes_c25615	negative regulation of autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc35341	induction of apoptosis by extracellular signals	death	P	Death-associated protein 1 (DAP-1)
ruditapes_c5202	activation of caspase activity	death	P	Death-associated protein 1 (DAP-1)
ruditapes_c5202	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes_c5202	apoptosis	death	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc33048	activation of caspase activity	death	P	Death-associated protein 1 (DAP-1)
ruditapes_c25615	apoptosis	death	P	Death-associated protein 1 (DAP-1)
ruditapes_lrc35341	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes_c883	reproduction	other biological processes	P	40S ribosomal protein S13
ruditapes_c883	growth	other biological processes	P	40S ribosomal protein S13
ruditapes_c883	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes_c883	nematode larval development	developmental processes	P	40S ribosomal protein S13
ruditapes_c883	gonad development	developmental processes	P	40S ribosomal protein S13
ruditapes_c883	embryonic development ending in birth or egg hatching	developmental processes	P	40S ribosomal protein S13
ruditapes_c883	cell migration	other biological processes	P	40S ribosomal protein S13
ruditapes_s38695	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_c16292	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 70) (gp70); Transmembrane protein (TM) (Glycoprotein 20) (gp20); R-peptide]
ruditapes_c16698	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	oogenesis	other biological processes	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	cuticle pattern formation	developmental processes	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	adult feeding behavior	other biological processes	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	cytoskeleton organization	cell organization and biogenesis	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	"transcription, DNA-dependent"	RNA metabolism	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	female germ-line sex determination	developmental processes	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	non-sensory hair organization	developmental processes	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	non-sensory hair organization	cell organization and biogenesis	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	cuticle pigmentation	developmental processes	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	multicellular organismal development	developmental processes	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	germ-line sex determination	developmental processes	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	cuticle development	developmental processes	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	regulation of cell shape	cell organization and biogenesis	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	cell differentiation	other biological processes	P	Protein ovo (Protein shaven baby)
ruditapes_c16698	epidermal cell differentiation	developmental processes	P	Protein ovo (Protein shaven baby)
ruditapes_c925	response to virus	other biological processes	P	Interferon
ruditapes_c925	defense response	stress response	P	Interferon
ruditapes2_c185	phosphorylation	other metabolic processes	P	Arginine kinase (AK) (EC 2.7.3.3)
ruditapes2_c647	phosphorylation	other metabolic processes	P	Arginine kinase (AK) (EC 2.7.3.3)
ruditapes_c12858	galactose metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c12858	metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c12858	galactose catabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c12858	galactitol metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c12858	carbohydrate metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c12858	carbohydrate phosphorylation	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c12858	phosphorylation	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c28299	xenobiotic metabolic process	other metabolic processes	P	Cytochrome P450 2J2 (EC 1.14.14.1) (Arachidonic acid epoxygenase) (CYPIIJ2)
ruditapes_c28299	icosanoid metabolic process	other metabolic processes	P	Cytochrome P450 2J2 (EC 1.14.14.1) (Arachidonic acid epoxygenase) (CYPIIJ2)
ruditapes_c28299	epoxygenase P450 pathway	other metabolic processes	P	Cytochrome P450 2J2 (EC 1.14.14.1) (Arachidonic acid epoxygenase) (CYPIIJ2)
ruditapes_c28299	oxidation reduction	other metabolic processes	P	Cytochrome P450 2J2 (EC 1.14.14.1) (Arachidonic acid epoxygenase) (CYPIIJ2)
ruditapes_c28299	regulation of heart contraction	other biological processes	P	Cytochrome P450 2J2 (EC 1.14.14.1) (Arachidonic acid epoxygenase) (CYPIIJ2)
ruditapes_c28299	linoleic acid metabolic process	other metabolic processes	P	Cytochrome P450 2J2 (EC 1.14.14.1) (Arachidonic acid epoxygenase) (CYPIIJ2)
ruditapes2_c2533	oxidation reduction	other metabolic processes	P	Cytochrome P450 2J3 (EC 1.14.14.1) (CYPIIJ3)
ruditapes_c27345	oxidation reduction	other metabolic processes	P	Cytochrome P450 2J3 (EC 1.14.14.1) (CYPIIJ3)
ruditapes_c7368	DNA repair	stress response	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	"nucleotide-excision repair, DNA damage recognition"	DNA metabolism	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	"nucleotide-excision repair, DNA damage recognition"	cell organization and biogenesis	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	response to UV-B	other biological processes	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	nucleotide-excision repair	stress response	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	nucleotide-excision repair	DNA metabolism	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	intra-S DNA damage checkpoint	stress response	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	cell cycle checkpoint	cell cycle and proliferation	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	response to drug	other biological processes	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	"nucleotide-excision repair, DNA damage recognition"	stress response	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	DNA repair	DNA metabolism	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	response to DNA damage stimulus	stress response	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	intra-S DNA damage checkpoint	cell cycle and proliferation	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_c7368	intra-S DNA damage checkpoint	signal transduction	P	DNA repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125)
ruditapes_lrc35085	negative regulation of cardiac muscle hypertrophy	other biological processes	P	Caveolin-3
ruditapes_s36221	negative regulation of cardiac muscle hypertrophy	other biological processes	P	Caveolin-3
ruditapes_lrc37263	cell growth	other biological processes	P	Caveolin-3
ruditapes_s36221	negative regulation of MAP kinase activity	other metabolic processes	P	Caveolin-3
ruditapes2_c3804	negative regulation of nitric-oxide synthase activity	other biological processes	P	Caveolin-3
ruditapes2_c3804	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Caveolin-3
ruditapes_s36221	regulation of membrane potential	other biological processes	P	Caveolin-3
ruditapes_lrc35709	regulation of skeletal muscle contraction	other biological processes	P	Caveolin-3
ruditapes_lrc37263	regulation of skeletal muscle contraction	other biological processes	P	Caveolin-3
ruditapes_lrc37263	endocytosis	transport	P	Caveolin-3
ruditapes_lrc37263	endocytosis	cell organization and biogenesis	P	Caveolin-3
ruditapes_s36221	cell differentiation	other biological processes	P	Caveolin-3
ruditapes2_c3804	cell differentiation	other biological processes	P	Caveolin-3
ruditapes_s36221	plasma membrane organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc35709	regulation of heart contraction	other biological processes	P	Caveolin-3
ruditapes_lrc35709	negative regulation of MAP kinase activity	other metabolic processes	P	Caveolin-3
ruditapes_s36221	protein localization	other biological processes	P	Caveolin-3
ruditapes_s36221	regulation of heart contraction	other biological processes	P	Caveolin-3
ruditapes_lrc35709	plasma membrane organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc35709	protein localization	other biological processes	P	Caveolin-3
ruditapes_lrc37263	cell differentiation	other biological processes	P	Caveolin-3
ruditapes2_c3804	negative regulation of MAPKKK cascade	signal transduction	P	Caveolin-3
ruditapes_lrc35709	negative regulation of cell size	other biological processes	P	Caveolin-3
ruditapes_lrc35085	glucose homeostasis	other biological processes	P	Caveolin-3
ruditapes_lrc37263	membrane raft organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_s36221	negative regulation of cell size	other biological processes	P	Caveolin-3
ruditapes2_c3804	regulation of skeletal muscle contraction	other biological processes	P	Caveolin-3
ruditapes_lrc37263	negative regulation of MAPKKK cascade	signal transduction	P	Caveolin-3
ruditapes_lrc37263	regulation of ventricular cardiomyocyte membrane repolarization	other biological processes	P	Caveolin-3
ruditapes_lrc35085	elevation of cytosolic calcium ion concentration	other biological processes	P	Caveolin-3
ruditapes_lrc37263	positive regulation of microtubule polymerization	protein metabolism	P	Caveolin-3
ruditapes_lrc37263	positive regulation of microtubule polymerization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc37263	regulation of heart contraction	other biological processes	P	Caveolin-3
ruditapes_lrc35085	negative regulation of protein kinase activity	other metabolic processes	P	Caveolin-3
ruditapes_s39927	triglyceride metabolic process	other metabolic processes	P	Caveolin-3
ruditapes_s36221	glucose homeostasis	other biological processes	P	Caveolin-3
ruditapes_lrc35709	regulation of membrane potential	other biological processes	P	Caveolin-3
ruditapes_s39927	negative regulation of MAP kinase activity	other metabolic processes	P	Caveolin-3
ruditapes_s36221	negative regulation of sarcomere organization	developmental processes	P	Caveolin-3
ruditapes_s36221	negative regulation of sarcomere organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_s36221	negative regulation of protein kinase activity	other metabolic processes	P	Caveolin-3
ruditapes_lrc35085	regulation of skeletal muscle contraction	other biological processes	P	Caveolin-3
ruditapes2_c3804	plasma membrane organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_s36221	regulation of skeletal muscle contraction	other biological processes	P	Caveolin-3
ruditapes_lrc35709	regulation of cardiac muscle contraction	other biological processes	P	Caveolin-3
ruditapes_lrc35709	glucose homeostasis	other biological processes	P	Caveolin-3
ruditapes2_c3804	negative regulation of protein kinase activity	other metabolic processes	P	Caveolin-3
ruditapes2_c3804	negative regulation of cell size	other biological processes	P	Caveolin-3
ruditapes_lrc35085	negative regulation of MAPKKK cascade	signal transduction	P	Caveolin-3
ruditapes_lrc35709	negative regulation of protein kinase activity	other metabolic processes	P	Caveolin-3
ruditapes_lrc35709	endocytosis	transport	P	Caveolin-3
ruditapes_lrc35709	endocytosis	cell organization and biogenesis	P	Caveolin-3
ruditapes_s36221	regulation of cardiac muscle contraction	other biological processes	P	Caveolin-3
ruditapes_lrc37263	glucose homeostasis	other biological processes	P	Caveolin-3
ruditapes_s39927	cell growth	other biological processes	P	Caveolin-3
ruditapes2_c3804	regulation of membrane potential	other biological processes	P	Caveolin-3
ruditapes_lrc35085	negative regulation of cell size	other biological processes	P	Caveolin-3
ruditapes_s36221	negative regulation of MAPKKK cascade	signal transduction	P	Caveolin-3
ruditapes_lrc35085	negative regulation of MAP kinase activity	other metabolic processes	P	Caveolin-3
ruditapes_lrc37263	plasma membrane organization	cell organization and biogenesis	P	Caveolin-3
ruditapes2_c3804	negative regulation of MAP kinase activity	other metabolic processes	P	Caveolin-3
ruditapes_lrc37263	regulation of membrane potential	other biological processes	P	Caveolin-3
ruditapes_lrc37263	negative regulation of cell size	other biological processes	P	Caveolin-3
ruditapes2_c3804	cholesterol homeostasis	other biological processes	P	Caveolin-3
ruditapes_lrc35085	regulation of membrane potential	other biological processes	P	Caveolin-3
ruditapes_lrc35709	cholesterol homeostasis	other biological processes	P	Caveolin-3
ruditapes_lrc35709	negative regulation of sarcomere organization	developmental processes	P	Caveolin-3
ruditapes_lrc35709	negative regulation of sarcomere organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc37263	muscle maintenance	other biological processes	P	Caveolin-3
ruditapes_lrc37263	negative regulation of protein kinase activity	other metabolic processes	P	Caveolin-3
ruditapes2_c3804	negative regulation of sarcomere organization	developmental processes	P	Caveolin-3
ruditapes2_c3804	negative regulation of sarcomere organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_s36221	membrane raft organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc35709	membrane raft organization	cell organization and biogenesis	P	Caveolin-3
ruditapes2_c3804	protein localization	other biological processes	P	Caveolin-3
ruditapes_s39927	negative regulation of cardiac muscle hypertrophy	other biological processes	P	Caveolin-3
ruditapes_lrc35709	muscle maintenance	other biological processes	P	Caveolin-3
ruditapes_lrc35085	plasma membrane organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_s36221	cholesterol homeostasis	other biological processes	P	Caveolin-3
ruditapes2_c3804	regulation of cardiac muscle contraction	other biological processes	P	Caveolin-3
ruditapes2_c3804	endocytosis	transport	P	Caveolin-3
ruditapes2_c3804	endocytosis	cell organization and biogenesis	P	Caveolin-3
ruditapes_s39927	elevation of cytosolic calcium ion concentration	other biological processes	P	Caveolin-3
ruditapes2_c3804	glucose homeostasis	other biological processes	P	Caveolin-3
ruditapes2_c3804	muscle maintenance	other biological processes	P	Caveolin-3
ruditapes_lrc35709	negative regulation of MAPKKK cascade	signal transduction	P	Caveolin-3
ruditapes_lrc35085	regulation of heart contraction	other biological processes	P	Caveolin-3
ruditapes_s36221	endocytosis	transport	P	Caveolin-3
ruditapes_s36221	endocytosis	cell organization and biogenesis	P	Caveolin-3
ruditapes_s39927	negative regulation of nitric-oxide synthase activity	other biological processes	P	Caveolin-3
ruditapes_lrc37263	cholesterol homeostasis	other biological processes	P	Caveolin-3
ruditapes_lrc35709	cell differentiation	other biological processes	P	Caveolin-3
ruditapes_lrc35085	protein localization	other biological processes	P	Caveolin-3
ruditapes2_c3804	membrane raft organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc37263	negative regulation of sarcomere organization	developmental processes	P	Caveolin-3
ruditapes_lrc37263	negative regulation of sarcomere organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc35085	cholesterol homeostasis	other biological processes	P	Caveolin-3
ruditapes_s39927	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Caveolin-3
ruditapes_lrc35085	positive regulation of microtubule polymerization	cell organization and biogenesis	P	Caveolin-3
ruditapes_s36221	muscle maintenance	other biological processes	P	Caveolin-3
ruditapes_lrc35085	negative regulation of sarcomere organization	developmental processes	P	Caveolin-3
ruditapes_lrc35085	negative regulation of sarcomere organization	cell organization and biogenesis	P	Caveolin-3
ruditapes2_c3804	regulation of heart contraction	other biological processes	P	Caveolin-3
ruditapes_s36221	regulation of ventricular cardiomyocyte membrane repolarization	other biological processes	P	Caveolin-3
ruditapes_lrc35709	regulation of ventricular cardiomyocyte membrane repolarization	other biological processes	P	Caveolin-3
ruditapes_lrc35085	cell differentiation	other biological processes	P	Caveolin-3
ruditapes2_c3804	regulation of ventricular cardiomyocyte membrane repolarization	other biological processes	P	Caveolin-3
ruditapes_lrc35085	endocytosis	transport	P	Caveolin-3
ruditapes_lrc35085	endocytosis	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc35085	positive regulation of microtubule polymerization	protein metabolism	P	Caveolin-3
ruditapes_lrc35709	positive regulation of microtubule polymerization	protein metabolism	P	Caveolin-3
ruditapes_lrc35709	positive regulation of microtubule polymerization	cell organization and biogenesis	P	Caveolin-3
ruditapes2_c3804	positive regulation of microtubule polymerization	protein metabolism	P	Caveolin-3
ruditapes2_c3804	positive regulation of microtubule polymerization	cell organization and biogenesis	P	Caveolin-3
ruditapes_s36221	positive regulation of microtubule polymerization	protein metabolism	P	Caveolin-3
ruditapes_s36221	positive regulation of microtubule polymerization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc35709	negative regulation of nitric-oxide synthase activity	other biological processes	P	Caveolin-3
ruditapes_lrc35709	triglyceride metabolic process	other metabolic processes	P	Caveolin-3
ruditapes_lrc37263	elevation of cytosolic calcium ion concentration	other biological processes	P	Caveolin-3
ruditapes_s39927	cell differentiation	other biological processes	P	Caveolin-3
ruditapes_lrc37263	regulation of cardiac muscle contraction	other biological processes	P	Caveolin-3
ruditapes_lrc35709	cell growth	other biological processes	P	Caveolin-3
ruditapes_lrc35085	membrane raft organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc35085	regulation of ventricular cardiomyocyte membrane repolarization	other biological processes	P	Caveolin-3
ruditapes_s39927	negative regulation of protein kinase activity	other metabolic processes	P	Caveolin-3
ruditapes_s36221	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Caveolin-3
ruditapes_s36221	negative regulation of nitric-oxide synthase activity	other biological processes	P	Caveolin-3
ruditapes_s36221	triglyceride metabolic process	other metabolic processes	P	Caveolin-3
ruditapes_lrc37263	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Caveolin-3
ruditapes_lrc35085	muscle maintenance	other biological processes	P	Caveolin-3
ruditapes_lrc35085	regulation of cardiac muscle contraction	other biological processes	P	Caveolin-3
ruditapes_s36221	cell growth	other biological processes	P	Caveolin-3
ruditapes_s39927	negative regulation of MAPKKK cascade	signal transduction	P	Caveolin-3
ruditapes_s39927	plasma membrane organization	cell organization and biogenesis	P	Caveolin-3
ruditapes2_c3804	triglyceride metabolic process	other metabolic processes	P	Caveolin-3
ruditapes_s39927	negative regulation of cell size	other biological processes	P	Caveolin-3
ruditapes_lrc37263	negative regulation of nitric-oxide synthase activity	other biological processes	P	Caveolin-3
ruditapes_s39927	regulation of skeletal muscle contraction	other biological processes	P	Caveolin-3
ruditapes_s39927	regulation of membrane potential	other biological processes	P	Caveolin-3
ruditapes_lrc37263	negative regulation of MAP kinase activity	other metabolic processes	P	Caveolin-3
ruditapes_s39927	endocytosis	transport	P	Caveolin-3
ruditapes_s39927	endocytosis	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc37263	negative regulation of cardiac muscle hypertrophy	other biological processes	P	Caveolin-3
ruditapes_lrc35085	cell growth	other biological processes	P	Caveolin-3
ruditapes_lrc35709	elevation of cytosolic calcium ion concentration	other biological processes	P	Caveolin-3
ruditapes_s39927	negative regulation of sarcomere organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc35085	negative regulation of nitric-oxide synthase activity	other biological processes	P	Caveolin-3
ruditapes_s39927	protein localization	other biological processes	P	Caveolin-3
ruditapes_s39927	muscle maintenance	other biological processes	P	Caveolin-3
ruditapes_lrc35085	triglyceride metabolic process	other metabolic processes	P	Caveolin-3
ruditapes_s39927	regulation of heart contraction	other biological processes	P	Caveolin-3
ruditapes_s39927	positive regulation of microtubule polymerization	protein metabolism	P	Caveolin-3
ruditapes_s39927	positive regulation of microtubule polymerization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc37263	triglyceride metabolic process	other metabolic processes	P	Caveolin-3
ruditapes2_c3804	cell growth	other biological processes	P	Caveolin-3
ruditapes_s39927	regulation of cardiac muscle contraction	other biological processes	P	Caveolin-3
ruditapes_s39927	negative regulation of sarcomere organization	developmental processes	P	Caveolin-3
ruditapes_s39927	glucose homeostasis	other biological processes	P	Caveolin-3
ruditapes2_c3804	elevation of cytosolic calcium ion concentration	other biological processes	P	Caveolin-3
ruditapes_lrc35709	negative regulation of cardiac muscle hypertrophy	other biological processes	P	Caveolin-3
ruditapes_s36221	elevation of cytosolic calcium ion concentration	other biological processes	P	Caveolin-3
ruditapes_s39927	cholesterol homeostasis	other biological processes	P	Caveolin-3
ruditapes_lrc37263	protein localization	other biological processes	P	Caveolin-3
ruditapes_lrc35709	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Caveolin-3
ruditapes_s39927	membrane raft organization	cell organization and biogenesis	P	Caveolin-3
ruditapes_lrc35085	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Caveolin-3
ruditapes_s39927	regulation of ventricular cardiomyocyte membrane repolarization	other biological processes	P	Caveolin-3
ruditapes2_c3804	negative regulation of cardiac muscle hypertrophy	other biological processes	P	Caveolin-3
ruditapes_c5494	coenzyme A metabolic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	response to ethanol	other biological processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	positive regulation of stress-activated MAPK cascade	signal transduction	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	positive regulation of stress-activated MAPK cascade	stress response	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	isoprenoid biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	"farnesyl diphosphate biosynthetic process, mevalonate pathway"	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	negative regulation of striated muscle cell apoptosis	death	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	negative regulation of MAP kinase activity	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	ubiquinone metabolic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	positive regulation of ERK1 and ERK2 cascade	signal transduction	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	aging	other biological processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	negative regulation of apoptosis	death	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	steroid biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	sterol biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	myoblast differentiation	developmental processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	response to nutrient	other biological processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	oxidation reduction	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	embryonic development	developmental processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	negative regulation of vasodilation	other biological processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	visual learning	other biological processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	positive regulation of cell proliferation	cell cycle and proliferation	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	positive regulation of cardiac muscle cell apoptosis	death	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	positive regulation of skeletal muscle tissue development	developmental processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	positive regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	lipid biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c5494	cholesterol biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c25281	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor 4
ruditapes_c25281	protein transport	transport	P	ADP-ribosylation factor 4
ruditapes_c25281	transport	transport	P	ADP-ribosylation factor 4
ruditapes_c25281	vesicle-mediated transport	transport	P	ADP-ribosylation factor 4
ruditapes_c1491	gene expression	other metabolic processes	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	M/G1 transition of mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	cellular nitrogen compound metabolic process	other metabolic processes	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	regulation of apoptosis	death	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	regulation of amino acid metabolic process	other metabolic processes	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	mRNA metabolic process	RNA metabolism	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent"	other biological processes	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	viral reproduction	other biological processes	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	apoptosis	death	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	cell cycle checkpoint	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	protein polyubiquitination	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	RNA metabolic process	RNA metabolism	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	S phase of mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_c1491	positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Mov34 protein homolog) (Proteasome subunit p40)
ruditapes_s37049	embryonic forelimb morphogenesis	developmental processes	P	Cellular retinoic acid-binding protein 2 (Cellular retinoic acid-binding protein II) (CRABP-II)
ruditapes_s37049	retinoic acid metabolic process	other metabolic processes	P	Cellular retinoic acid-binding protein 2 (Cellular retinoic acid-binding protein II) (CRABP-II)
ruditapes_s37049	lipid transport	transport	P	Cellular retinoic acid-binding protein 2 (Cellular retinoic acid-binding protein II) (CRABP-II)
ruditapes_s37049	transport	transport	P	Cellular retinoic acid-binding protein 2 (Cellular retinoic acid-binding protein II) (CRABP-II)
ruditapes_c19316	negative regulation of axon extension	developmental processes	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	negative regulation of axon extension	cell organization and biogenesis	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	response to ionizing radiation	other biological processes	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	defense response	stress response	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	inflammatory response to antigenic stimulus	stress response	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	positive regulation of cell-cell adhesion	cell adhesion	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	fat cell differentiation	other biological processes	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	defense response to bacterium	stress response	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	signal transduction	signal transduction	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	positive regulation of fever	stress response	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	negative regulation of cell migration	other biological processes	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	inflammatory response	stress response	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	regulation of fever	stress response	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	positive regulation of apoptosis by virus	death	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	positive regulation of neuron differentiation	developmental processes	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	response to lipopolysaccharide	other biological processes	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	positive regulation of gene expression	other metabolic processes	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	positive regulation of tumor necrosis factor production	other biological processes	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	forebrain development	developmental processes	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	G-protein coupled receptor protein signaling pathway	signal transduction	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	positive regulation of inflammatory response	stress response	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	aging	other biological processes	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	positive regulation of interleukin-1 beta secretion	transport	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c19316	positive regulation of interleukin-6 production	other biological processes	P	C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
ruditapes_c18988	proteoglycan metabolic process	other metabolic processes	P	N-sulphoglucosamine sulphohydrolase (EC 3.10.1.1) (Sulfoglucosamine sulfamidase) (Sulphamidase)
ruditapes_c18988	metabolic process	other metabolic processes	P	N-sulphoglucosamine sulphohydrolase (EC 3.10.1.1) (Sulfoglucosamine sulfamidase) (Sulphamidase)
ruditapes_c23158	response to hypoxia	stress response	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	luteinization	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	succinate metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	response to peptide hormone stimulus	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of lymphocyte differentiation	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	valine metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	isoleucine metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	signal transduction	signal transduction	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of mitotic cell cycle	cell cycle and proliferation	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	negative regulation of erythrocyte differentiation	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of interleukin-2 biosynthetic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of natural killer cell mediated cytotoxicity	stress response	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of natural killer cell mediated cytotoxicity	death	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of natural killer cell proliferation	cell cycle and proliferation	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of survival gene product expression	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of survival gene product expression	death	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	creatinine metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	T cell homeostasis	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	oxaloacetate metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	response to interleukin-2	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	liver development	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of natural killer cell differentiation	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	response to estradiol stimulus	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	regulation of epithelial cell differentiation	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	transcription from RNA polymerase II promoter	RNA metabolism	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of cell motion	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	natural killer cell differentiation	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	response to interleukin-4	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	response to lipopolysaccharide	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	Peyer's patch development	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	JAK-STAT cascade involved in growth hormone signaling pathway	signal transduction	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	response to ethanol	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	citrate metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	progesterone metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	acute-phase response	stress response	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of activated T cell proliferation	cell cycle and proliferation	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of inflammatory response	stress response	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	regulation of multicellular organism growth	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	lactation	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	fatty acid metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	development of secondary male sexual characteristics	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	development of secondary female sexual characteristics	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	sex differentiation	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	T cell differentiation in the thymus	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	response to interleukin-15	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of B cell differentiation	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	allantoin metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	cytokine-mediated signaling pathway	signal transduction	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of multicellular organism growth	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	2-oxoglutarate metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	female pregnancy	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	taurine metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	"transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	cellular response to hormone stimulus	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of cell proliferation	cell cycle and proliferation	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	negative regulation of apoptosis	death	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	JAK-STAT cascade	signal transduction	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	positive regulation of gamma-delta T cell differentiation	developmental processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	creatine metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	regulation of steroid metabolic process	other metabolic processes	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	regulation of cell adhesion	cell adhesion	P	Signal transducer and activator of transcription 5B
ruditapes_c23158	lipid storage	other biological processes	P	Signal transducer and activator of transcription 5B
ruditapes_c18976	metabolic process	other metabolic processes	P	"Riboflavin biosynthesis protein RibBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (EC 4.1.99.12); GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II)]"
ruditapes_c18976	riboflavin biosynthetic process	other metabolic processes	P	"Riboflavin biosynthesis protein RibBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (EC 4.1.99.12); GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II)]"
ruditapes_s35308	glutathione metabolic process	other metabolic processes	P	"Glutathione S-transferase alpha M14 (EC 2.5.1.18) (GST class-alpha) [Cleaved into: Glutathione S-transferase alpha M14, N-terminally processed]"
ruditapes_s35308	metabolic process	other metabolic processes	P	"Glutathione S-transferase alpha M14 (EC 2.5.1.18) (GST class-alpha) [Cleaved into: Glutathione S-transferase alpha M14, N-terminally processed]"
ruditapes_c23109	regulation of transmembrane ion transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes_c23109	transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes_c23109	chloride transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes_c23109	retina development in camera-type eye	developmental processes	P	Chloride channel protein 2 (ClC-2)
ruditapes_c23109	ion transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes_c23109	cell differentiation involved in salivary gland development	developmental processes	P	Chloride channel protein 2 (ClC-2)
ruditapes_c23109	lung development	developmental processes	P	Chloride channel protein 2 (ClC-2)
ruditapes_c23109	regulation of anion transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes_c23109	transmembrane transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes_c21095	transmembrane transport	transport	P	Chloride transport protein 6 (Chloride channel protein 6) (ClC-6)
ruditapes_c21095	ion transport	transport	P	Chloride transport protein 6 (Chloride channel protein 6) (ClC-6)
ruditapes_c21095	signal transduction	signal transduction	P	Chloride transport protein 6 (Chloride channel protein 6) (ClC-6)
ruditapes_c21095	transport	transport	P	Chloride transport protein 6 (Chloride channel protein 6) (ClC-6)
ruditapes_c21095	cell volume homeostasis	other biological processes	P	Chloride transport protein 6 (Chloride channel protein 6) (ClC-6)
ruditapes_c21095	chloride transport	transport	P	Chloride transport protein 6 (Chloride channel protein 6) (ClC-6)
ruditapes_c13494	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 75D (Zinc finger protein 75) (Zinc finger protein 82)
ruditapes_c13494	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 75D (Zinc finger protein 75) (Zinc finger protein 82)
ruditapes_c13494	viral reproduction	other biological processes	P	Zinc finger protein 75D (Zinc finger protein 75) (Zinc finger protein 82)
ruditapes_c30246	protein folding	protein metabolism	P	Heat shock protein 83
ruditapes_c30246	response to stress	stress response	P	Heat shock protein 83
ruditapes_c24873	DNA repair	stress response	P	Chromosome partition protein Smc
ruditapes_c24873	DNA repair	DNA metabolism	P	Chromosome partition protein Smc
ruditapes_c24873	chromosome condensation	cell organization and biogenesis	P	Chromosome partition protein Smc
ruditapes_c24873	DNA recombination	DNA metabolism	P	Chromosome partition protein Smc
ruditapes_c24873	sister chromatid cohesion	cell cycle and proliferation	P	Chromosome partition protein Smc
ruditapes_c24873	sister chromatid cohesion	cell organization and biogenesis	P	Chromosome partition protein Smc
ruditapes_c24873	chromosome organization	cell organization and biogenesis	P	Chromosome partition protein Smc
ruditapes_c24373	sensory perception of smell	other biological processes	P	"Olfactory guanylyl cyclase GC-D (EC 4.6.1.2) (Guanylate cyclase, olfactory)"
ruditapes_c24373	protein amino acid phosphorylation	protein metabolism	P	"Olfactory guanylyl cyclase GC-D (EC 4.6.1.2) (Guanylate cyclase, olfactory)"
ruditapes_c24373	cyclic nucleotide biosynthetic process	other metabolic processes	P	"Olfactory guanylyl cyclase GC-D (EC 4.6.1.2) (Guanylate cyclase, olfactory)"
ruditapes_c24373	cGMP biosynthetic process	other metabolic processes	P	"Olfactory guanylyl cyclase GC-D (EC 4.6.1.2) (Guanylate cyclase, olfactory)"
ruditapes_c24373	response to stimulus	other biological processes	P	"Olfactory guanylyl cyclase GC-D (EC 4.6.1.2) (Guanylate cyclase, olfactory)"
ruditapes_c18064	visual perception	other biological processes	P	Guanylyl cyclase GC-E (EC 4.6.1.2) (Guanylate cyclase 2E)
ruditapes_c18064	protein amino acid phosphorylation	protein metabolism	P	Guanylyl cyclase GC-E (EC 4.6.1.2) (Guanylate cyclase 2E)
ruditapes_c18064	response to stimulus	other biological processes	P	Guanylyl cyclase GC-E (EC 4.6.1.2) (Guanylate cyclase 2E)
ruditapes_c18064	cGMP biosynthetic process	other metabolic processes	P	Guanylyl cyclase GC-E (EC 4.6.1.2) (Guanylate cyclase 2E)
ruditapes_c18064	cyclic nucleotide biosynthetic process	other metabolic processes	P	Guanylyl cyclase GC-E (EC 4.6.1.2) (Guanylate cyclase 2E)
ruditapes_c18931	cGMP biosynthetic process	other metabolic processes	P	"Retinal guanylyl cyclase 2 (RETGC-2) (EC 4.6.1.2) (Guanylate cyclase 2F, retinal) (Guanylate cyclase F) (GC-F) (Rod outer segment membrane guanylate cyclase 2) (ROS-GC2)"
ruditapes_c18931	cyclic nucleotide biosynthetic process	other metabolic processes	P	"Retinal guanylyl cyclase 2 (RETGC-2) (EC 4.6.1.2) (Guanylate cyclase 2F, retinal) (Guanylate cyclase F) (GC-F) (Rod outer segment membrane guanylate cyclase 2) (ROS-GC2)"
ruditapes_c18931	visual perception	other biological processes	P	"Retinal guanylyl cyclase 2 (RETGC-2) (EC 4.6.1.2) (Guanylate cyclase 2F, retinal) (Guanylate cyclase F) (GC-F) (Rod outer segment membrane guanylate cyclase 2) (ROS-GC2)"
ruditapes_c18931	protein amino acid phosphorylation	protein metabolism	P	"Retinal guanylyl cyclase 2 (RETGC-2) (EC 4.6.1.2) (Guanylate cyclase 2F, retinal) (Guanylate cyclase F) (GC-F) (Rod outer segment membrane guanylate cyclase 2) (ROS-GC2)"
ruditapes_c18931	response to stimulus	other biological processes	P	"Retinal guanylyl cyclase 2 (RETGC-2) (EC 4.6.1.2) (Guanylate cyclase 2F, retinal) (Guanylate cyclase F) (GC-F) (Rod outer segment membrane guanylate cyclase 2) (ROS-GC2)"
ruditapes2_lrc3157	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase A (AdoHcyase A) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase A)
ruditapes_lrc6858	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase A (AdoHcyase A) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase A)
ruditapes2_lrc3937	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase A (AdoHcyase A) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase A)
ruditapes_lrc34751	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase A (AdoHcyase A) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase A)
ruditapes_lrc35786	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase A (AdoHcyase A) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase A)
ruditapes_lrc39109	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase A (AdoHcyase A) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase A)
ruditapes_c11833	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) (Fragment)
ruditapes_c21027	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) (Fragment)
ruditapes_c21027	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) (Fragment)
ruditapes_c11833	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) (Fragment)
ruditapes_c11833	transport	transport	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) (Fragment)
ruditapes_c21027	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) (Fragment)
ruditapes_c21027	transport	transport	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) (Fragment)
ruditapes_c11833	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5) (Fragment)
ruditapes2_c2044	transport	transport	P	Apolipoprotein D (Apo-D) (ApoD)
ruditapes_c6951	transport	transport	P	Apolipoprotein D (Apo-D) (ApoD)
ruditapes2_c29	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit) (Fragment)
ruditapes2_c29	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit) (Fragment)
ruditapes2_c29	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit) (Fragment)
ruditapes_c9887	cell division	other biological processes	P	Cyclin-dependent kinase 1 (CDK1) (EC 2.7.11.22) (EC 2.7.11.23) (Cell division control protein 2 homolog) (Cell division protein kinase 1) (p34 protein kinase)
ruditapes_c9887	phosphorylation	other metabolic processes	P	Cyclin-dependent kinase 1 (CDK1) (EC 2.7.11.22) (EC 2.7.11.23) (Cell division control protein 2 homolog) (Cell division protein kinase 1) (p34 protein kinase)
ruditapes_c9887	mitosis	cell cycle and proliferation	P	Cyclin-dependent kinase 1 (CDK1) (EC 2.7.11.22) (EC 2.7.11.23) (Cell division control protein 2 homolog) (Cell division protein kinase 1) (p34 protein kinase)
ruditapes_c9887	mitosis	cell organization and biogenesis	P	Cyclin-dependent kinase 1 (CDK1) (EC 2.7.11.22) (EC 2.7.11.23) (Cell division control protein 2 homolog) (Cell division protein kinase 1) (p34 protein kinase)
ruditapes_c9887	cell cycle	cell cycle and proliferation	P	Cyclin-dependent kinase 1 (CDK1) (EC 2.7.11.22) (EC 2.7.11.23) (Cell division control protein 2 homolog) (Cell division protein kinase 1) (p34 protein kinase)
ruditapes_c9887	protein amino acid phosphorylation	protein metabolism	P	Cyclin-dependent kinase 1 (CDK1) (EC 2.7.11.22) (EC 2.7.11.23) (Cell division control protein 2 homolog) (Cell division protein kinase 1) (p34 protein kinase)
ruditapes_c31504	mitosis	cell cycle and proliferation	P	G2/mitotic-specific cyclin-A (Fragment)
ruditapes_c31504	mitosis	cell organization and biogenesis	P	G2/mitotic-specific cyclin-A (Fragment)
ruditapes_c31504	regulation of G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-A (Fragment)
ruditapes_c31504	cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-A (Fragment)
ruditapes_c31504	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	G2/mitotic-specific cyclin-A (Fragment)
ruditapes_c31504	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	G2/mitotic-specific cyclin-A (Fragment)
ruditapes_c31504	regulation of cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-A (Fragment)
ruditapes_c31504	cell division	other biological processes	P	G2/mitotic-specific cyclin-A (Fragment)
ruditapes_lrc15083	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase 5 (PPIase 5) (EC 5.2.1.8) (Cyclophilin-5) (Rotamase 5)
ruditapes_lrc15083	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase 5 (PPIase 5) (EC 5.2.1.8) (Cyclophilin-5) (Rotamase 5)
ruditapes_s40437	embryonic development ending in birth or egg hatching	developmental processes	P	Peptidyl-prolyl cis-trans isomerase 7 (PPIase 7) (EC 5.2.1.8) (Cyclophilin-7) (Rotamase 7)
ruditapes_s40437	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase 7 (PPIase 7) (EC 5.2.1.8) (Cyclophilin-7) (Rotamase 7)
ruditapes_s40437	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase 7 (PPIase 7) (EC 5.2.1.8) (Cyclophilin-7) (Rotamase 7)
ruditapes_lrc22737	poly(3-hydroxyalkanoate) biosynthetic process	other metabolic processes	P	Poly(3-hydroxyalkanoate) polymerase (PHA polymerase) (EC 2.3.1.-) (PHA synthase) (Polyhydroxyalkanoic acid synthase)
ruditapes_lrc22737	poly-hydroxybutyrate biosynthetic process	other metabolic processes	P	Poly(3-hydroxyalkanoate) polymerase (PHA polymerase) (EC 2.3.1.-) (PHA synthase) (Polyhydroxyalkanoic acid synthase)
ruditapes_c9968	ATP catabolic process	other metabolic processes	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) (Fragment)
ruditapes_c9968	response to DNA damage stimulus	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) (Fragment)
ruditapes_c9968	DNA repair	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) (Fragment)
ruditapes_c9968	DNA repair	DNA metabolism	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) (Fragment)
ruditapes_c10868	SOS response	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) (Fragment)
ruditapes_c10868	ATP catabolic process	other metabolic processes	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) (Fragment)
ruditapes_c9968	SOS response	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) (Fragment)
ruditapes_c10868	DNA repair	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) (Fragment)
ruditapes_c10868	DNA repair	DNA metabolism	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) (Fragment)
ruditapes_c10868	response to DNA damage stimulus	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) (Fragment)
ruditapes_c6253	alginic acid biosynthetic process	other metabolic processes	P	Membrane protein GlpM
ruditapes_lrc26299	protein homooligomerization	cell organization and biogenesis	P	Major prion protein (PrP) (PrP27-30) (PrP33-35C) (CD antigen CD230)
ruditapes_c27900	signal transduction	signal transduction	P	Rho-related GTP-binding protein RhoN (Rho family GTPase 2) (Rho-related GTP-binding protein Rho7) (Rnd2)
ruditapes_c27900	small GTPase mediated signal transduction	signal transduction	P	Rho-related GTP-binding protein RhoN (Rho family GTPase 2) (Rho-related GTP-binding protein Rho7) (Rnd2)
ruditapes_c27900	GTP catabolic process	other metabolic processes	P	Rho-related GTP-binding protein RhoN (Rho family GTPase 2) (Rho-related GTP-binding protein Rho7) (Rnd2)
ruditapes2_c1039	negative regulation of peptidase activity	other biological processes	P	Ovomucoid (Fragment)
ruditapes2_c1014	negative regulation of peptidase activity	other biological processes	P	Ovomucoid (Fragment)
ruditapes_c9231	negative regulation of peptidase activity	other biological processes	P	Ovomucoid (Fragment)
ruditapes_lrc38116	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain
ruditapes_lrc38116	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain
ruditapes_lrc38116	microtubule-based movement	other biological processes	P	Tubulin alpha chain
ruditapes_lrc38116	microtubule-based process	other biological processes	P	Tubulin alpha chain
ruditapes_c1210	sorocarp development	stress response	P	SCF ubiquitin ligase complex protein SKP1a (Glycoprotein FP21 isoform A) [Cleaved into: SCF ubiquitin ligase complex protein SKP1a(4-162); SCF ubiquitin ligase complex protein SKP1a(6-162)]
ruditapes_c1210	sorocarp development	developmental processes	P	SCF ubiquitin ligase complex protein SKP1a (Glycoprotein FP21 isoform A) [Cleaved into: SCF ubiquitin ligase complex protein SKP1a(4-162); SCF ubiquitin ligase complex protein SKP1a(6-162)]
ruditapes_c2514	ubiquitin-dependent protein catabolic process	protein metabolism	P	SCF ubiquitin ligase complex protein SKP1a (Glycoprotein FP21 isoform A) [Cleaved into: SCF ubiquitin ligase complex protein SKP1a(4-162); SCF ubiquitin ligase complex protein SKP1a(6-162)]
ruditapes_c2514	protein ubiquitination	protein metabolism	P	SCF ubiquitin ligase complex protein SKP1a (Glycoprotein FP21 isoform A) [Cleaved into: SCF ubiquitin ligase complex protein SKP1a(4-162); SCF ubiquitin ligase complex protein SKP1a(6-162)]
ruditapes_c1210	protein ubiquitination	protein metabolism	P	SCF ubiquitin ligase complex protein SKP1a (Glycoprotein FP21 isoform A) [Cleaved into: SCF ubiquitin ligase complex protein SKP1a(4-162); SCF ubiquitin ligase complex protein SKP1a(6-162)]
ruditapes_c1210	ubiquitin-dependent protein catabolic process	protein metabolism	P	SCF ubiquitin ligase complex protein SKP1a (Glycoprotein FP21 isoform A) [Cleaved into: SCF ubiquitin ligase complex protein SKP1a(4-162); SCF ubiquitin ligase complex protein SKP1a(6-162)]
ruditapes_c2514	sorocarp development	stress response	P	SCF ubiquitin ligase complex protein SKP1a (Glycoprotein FP21 isoform A) [Cleaved into: SCF ubiquitin ligase complex protein SKP1a(4-162); SCF ubiquitin ligase complex protein SKP1a(6-162)]
ruditapes_c2514	sorocarp development	developmental processes	P	SCF ubiquitin ligase complex protein SKP1a (Glycoprotein FP21 isoform A) [Cleaved into: SCF ubiquitin ligase complex protein SKP1a(4-162); SCF ubiquitin ligase complex protein SKP1a(6-162)]
ruditapes_c26318	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c26318	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c14272	viral capsid assembly	cell organization and biogenesis	P	Triplex capsid protein VP19C (Minor capsid protein)
ruditapes_c20341	DNA replication	DNA metabolism	P	Probable ATP-dependent helicase U77 (EC 3.6.4.-)
ruditapes_c38622	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c38622	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c2359	defense response	stress response	P	"Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)"
ruditapes_c2359	carbohydrate metabolic process	other metabolic processes	P	"Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)"
ruditapes_c2359	metabolic process	other metabolic processes	P	"Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)"
ruditapes2_c1274	purine base biosynthetic process	other metabolic processes	P	"Amidophosphoribosyltransferase, chloroplastic (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPAT) (Fragment)"
ruditapes2_c1274	nucleoside metabolic process	other metabolic processes	P	"Amidophosphoribosyltransferase, chloroplastic (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPAT) (Fragment)"
ruditapes2_c1274	purine nucleotide biosynthetic process	other metabolic processes	P	"Amidophosphoribosyltransferase, chloroplastic (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPAT) (Fragment)"
ruditapes2_c1274	glutamine metabolic process	other metabolic processes	P	"Amidophosphoribosyltransferase, chloroplastic (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPAT) (Fragment)"
ruditapes_c25328	positive regulation of cholesterol efflux	transport	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)
ruditapes_c25328	phosphatidylcholine metabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)
ruditapes_c25328	blood circulation	other biological processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)
ruditapes_c25328	cholesterol metabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)
ruditapes_c25328	carboxylic acid catabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)
ruditapes_c25328	positive regulation of transporter activity	transport	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)
ruditapes_c25328	lipid metabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)
ruditapes_c25328	organophosphate catabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)
ruditapes_c25328	response to toxin	other biological processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)
ruditapes_c25328	positive regulation of binding	other biological processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)
ruditapes_c25328	aromatic compound catabolic process	other metabolic processes	P	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)
ruditapes_c14074	virion assembly	cell organization and biogenesis	P	Capsid assembly protein U30
ruditapes_c14074	viral capsid assembly	cell organization and biogenesis	P	Capsid assembly protein U30
ruditapes_c12305	viral capsid assembly	cell organization and biogenesis	P	Capsid assembly protein U30
ruditapes_c12305	virion assembly	cell organization and biogenesis	P	Capsid assembly protein U30
ruditapes_c14901	DNA replication	DNA metabolism	P	Replication origin-binding protein (OBP)
ruditapes_c26472	viral capsid assembly	cell organization and biogenesis	P	Packaging protein UL32
ruditapes_c12166	DNA replication	DNA metabolism	P	Helicase/primase complex protein
ruditapes_c8912	protein modification process	protein metabolism	P	Ubiquitin-activating enzyme E1 1
ruditapes_lrc36256	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc36256	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc7040	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc4024	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc7040	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc37201	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc7040	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc37201	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc27822	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc27822	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc36256	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc4024	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc37201	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc27822	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc36256	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc4024	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc27822	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc37201	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc36256	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc4024	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc27822	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc7040	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc4024	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc7040	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_lrc37201	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_c1563	DNA replication	DNA metabolism	P	Major DNA-binding protein (MDBP)
ruditapes_c12795	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor homolog U51
ruditapes_c12795	signal transduction	signal transduction	P	G-protein coupled receptor homolog U51
ruditapes_c21131	protein processing	protein metabolism	P	Tripartite terminase subunit UL28 homolog
ruditapes_c21131	viral procapsid maturation	cell organization and biogenesis	P	Tripartite terminase subunit UL28 homolog
ruditapes_c21131	protein transport	transport	P	Tripartite terminase subunit UL28 homolog
ruditapes_c21131	viral capsid assembly	cell organization and biogenesis	P	Tripartite terminase subunit UL28 homolog
ruditapes2_c1798	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Carbapenem-hydrolyzing beta-lactamase transcriptional activator
ruditapes2_c1798	"transcription, DNA-dependent"	RNA metabolism	P	Carbapenem-hydrolyzing beta-lactamase transcriptional activator
ruditapes_c13744	signal transduction	signal transduction	P	Beta-chimaerin (Beta-chimerin) (Rho GTPase-activating protein 3)
ruditapes_c13744	positive regulation of GTPase activity	other biological processes	P	Beta-chimaerin (Beta-chimerin) (Rho GTPase-activating protein 3)
ruditapes_c13744	regulation of small GTPase mediated signal transduction	signal transduction	P	Beta-chimaerin (Beta-chimerin) (Rho GTPase-activating protein 3)
ruditapes_c13744	small GTPase mediated signal transduction	signal transduction	P	Beta-chimaerin (Beta-chimerin) (Rho GTPase-activating protein 3)
ruditapes_c13744	acrosome assembly	cell organization and biogenesis	P	Beta-chimaerin (Beta-chimerin) (Rho GTPase-activating protein 3)
ruditapes_c13744	positive regulation of Rac GTPase activity	signal transduction	P	Beta-chimaerin (Beta-chimerin) (Rho GTPase-activating protein 3)
ruditapes2_c2275	regulation of translational termination	protein metabolism	P	Ribonuclease UK114 (EC 3.1.-.-) (14.5 kDa translational inhibitor protein) (p14.5) (Heat-responsive protein 12) (UK114 antigen homolog)
ruditapes2_c2275	regulation of translational termination	cell organization and biogenesis	P	Ribonuclease UK114 (EC 3.1.-.-) (14.5 kDa translational inhibitor protein) (p14.5) (Heat-responsive protein 12) (UK114 antigen homolog)
ruditapes_lrc21394	cobalamin metabolic process	other metabolic processes	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes2_c62	cobalamin metabolic process	other metabolic processes	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes2_c1110	transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes2_c62	cobalamin transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes_lrc21394	transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes2_c62	transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes_lrc21394	cobalamin transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes_lrc21394	ion transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes2_c62	cobalt ion transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes2_c1110	cobalt ion transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes2_c1110	cobalamin transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes_lrc21394	cobalt ion transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes2_c62	ion transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes2_c1110	cobalamin metabolic process	other metabolic processes	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes2_c1110	ion transport	transport	P	Gastric intrinsic factor (Intrinsic factor) (IF) (INF)
ruditapes_c12522	auxin biosynthetic process	other metabolic processes	P	Indoleacetamide hydrolase (IAH) (EC 3.5.1.-) (Indole-3-acetamide hydrolase)
ruditapes2_lrc1705	steroid metabolic process	other metabolic processes	P	Bile salt sulfotransferase 1 (EC 2.8.2.14) (Hydroxysteroid sulfotransferase) (ST) (Sulfotransferase 2A1) (ST2A1)
ruditapes2_lrc1705	lipid metabolic process	other metabolic processes	P	Bile salt sulfotransferase 1 (EC 2.8.2.14) (Hydroxysteroid sulfotransferase) (ST) (Sulfotransferase 2A1) (ST2A1)
ruditapes_c15346	sulfation	other metabolic processes	P	"Estrogen sulfotransferase, isoform 1 (EST-1) (EC 2.8.2.4) (Estrone sulfotransferase) (Sulfotransferase 1E1) (ST1E1) (Sulfotransferase, estrogen-preferring)"
ruditapes_c15346	female pregnancy	other biological processes	P	"Estrogen sulfotransferase, isoform 1 (EST-1) (EC 2.8.2.4) (Estrone sulfotransferase) (Sulfotransferase 1E1) (ST1E1) (Sulfotransferase, estrogen-preferring)"
ruditapes_c15346	estrogen metabolic process	other metabolic processes	P	"Estrogen sulfotransferase, isoform 1 (EST-1) (EC 2.8.2.4) (Estrone sulfotransferase) (Sulfotransferase 1E1) (ST1E1) (Sulfotransferase, estrogen-preferring)"
ruditapes_c27576	glycolysis	other metabolic processes	P	"Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial (PDHE1-A) (EC 1.2.4.1)"
ruditapes_c27576	response to cadmium ion	other biological processes	P	"Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial (PDHE1-A) (EC 1.2.4.1)"
ruditapes_c27576	oxidation reduction	other metabolic processes	P	"Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial (PDHE1-A) (EC 1.2.4.1)"
ruditapes_c27576	metabolic process	other metabolic processes	P	"Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial (PDHE1-A) (EC 1.2.4.1)"
ruditapes_c22368	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Peroxisome proliferation transcriptional regulator (Oleate-activated transcription factor 2)
ruditapes_c22368	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Peroxisome proliferation transcriptional regulator (Oleate-activated transcription factor 2)
ruditapes_c22368	positive regulation of fatty acid beta-oxidation	other metabolic processes	P	Peroxisome proliferation transcriptional regulator (Oleate-activated transcription factor 2)
ruditapes_c22368	"transcription, DNA-dependent"	RNA metabolism	P	Peroxisome proliferation transcriptional regulator (Oleate-activated transcription factor 2)
ruditapes_c27201	DNA damage checkpoint	cell cycle and proliferation	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	DNA damage checkpoint	signal transduction	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	DNA damage checkpoint	stress response	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	DNA repair	stress response	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	DNA repair	DNA metabolism	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	mitosis	cell cycle and proliferation	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	DNA replication checkpoint	DNA metabolism	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	cell cycle	cell cycle and proliferation	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	female meiosis chromosome segregation	cell cycle and proliferation	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	mitosis	cell organization and biogenesis	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	DNA strand elongation during DNA replication	DNA metabolism	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	mitotic chromosome condensation	cell cycle and proliferation	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	mitotic chromosome condensation	cell organization and biogenesis	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	DNA replication	DNA metabolism	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c27201	DNA replication checkpoint	cell cycle and proliferation	P	Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (Replication factor C subunit 4) (DmRfc4)
ruditapes_c19991	biological_process	other biological processes	P	Protein COS12
ruditapes_c28384	transport	transport	P	Ran-specific GTPase-activating protein 30 (Ran-binding protein 30) (RANBP30)
ruditapes_c28384	positive regulation of GTPase activity	other biological processes	P	Ran-specific GTPase-activating protein 30 (Ran-binding protein 30) (RANBP30)
ruditapes_c28384	protein transport	transport	P	Ran-specific GTPase-activating protein 30 (Ran-binding protein 30) (RANBP30)
ruditapes_c28384	biological_process	other biological processes	P	Ran-specific GTPase-activating protein 30 (Ran-binding protein 30) (RANBP30)
ruditapes_c31382	electron transport chain	other metabolic processes	P	Probable metalloreductase AIM14 (EC 1.16.1.-) (Altered inheritance of mitochondria protein 14)
ruditapes_c31382	oxidation reduction	other metabolic processes	P	Probable metalloreductase AIM14 (EC 1.16.1.-) (Altered inheritance of mitochondria protein 14)
ruditapes_c31382	biological_process	other biological processes	P	Probable metalloreductase AIM14 (EC 1.16.1.-) (Altered inheritance of mitochondria protein 14)
ruditapes_c31382	ion transport	transport	P	Probable metalloreductase AIM14 (EC 1.16.1.-) (Altered inheritance of mitochondria protein 14)
ruditapes_c31382	transport	transport	P	Probable metalloreductase AIM14 (EC 1.16.1.-) (Altered inheritance of mitochondria protein 14)
ruditapes_c28592	biological_process	other biological processes	P	SANT domain-containing protein 2
ruditapes_lrc34080	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	U1 small nuclear ribonucleoprotein component SNU71
ruditapes_lrc34080	mRNA processing	RNA metabolism	P	U1 small nuclear ribonucleoprotein component SNU71
ruditapes_lrc34080	RNA splicing	RNA metabolism	P	U1 small nuclear ribonucleoprotein component SNU71
ruditapes_c14730	oxidation reduction	other metabolic processes	P	Uncharacterized protein YGR017W
ruditapes_c14730	biological_process	other biological processes	P	Uncharacterized protein YGR017W
ruditapes_c11760	tRNA processing	RNA metabolism	P	tRNA(His) guanylyltransferase (EC 2.7.7.79) (tRNA-histidine guanylyltransferase)
ruditapes_c11760	tRNA modification	RNA metabolism	P	tRNA(His) guanylyltransferase (EC 2.7.7.79) (tRNA-histidine guanylyltransferase)
ruditapes_c10589	transport	transport	P	Ammonium transporter MEP3
ruditapes_c26556	transport	transport	P	Ammonium transporter MEP3
ruditapes_c10589	nitrogen utilization	other metabolic processes	P	Ammonium transporter MEP3
ruditapes_c26556	nitrogen utilization	other metabolic processes	P	Ammonium transporter MEP3
ruditapes_c26556	ammonium transport	transport	P	Ammonium transporter MEP3
ruditapes_c10589	ammonium transport	transport	P	Ammonium transporter MEP3
ruditapes2_c4414	glycolysis	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes2_c4414	oxidation reduction	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes2_c4414	glucose metabolic process	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c13338	glycolysis	other metabolic processes	P	Fructose-bisphosphate aldolase (EC 4.1.2.13)
ruditapes_c9721	transport	transport	P	Outer membrane usher protein CssD (CS6 fimbria usher protein)
ruditapes2_c854	protein processing	protein metabolism	P	Chaperone protein ClpB 1
ruditapes2_c854	response to heat	stress response	P	Chaperone protein ClpB 1
ruditapes2_c854	protein metabolic process	protein metabolism	P	Chaperone protein ClpB 1
ruditapes2_c854	response to stress	stress response	P	Chaperone protein ClpB 1
ruditapes2_c5048	response to stress	stress response	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	ovarian follicle development	developmental processes	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	response to organic cyclic substance	other biological processes	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	anti-apoptosis	death	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	negative regulation of caspase activity	death	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	response to hydrogen peroxide	stress response	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	response to lead ion	other biological processes	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	response to hypoxia	stress response	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	apoptosis	death	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	cytokinesis	other biological processes	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	response to oxidative stress	stress response	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	response to inorganic substance	other biological processes	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	response to organic nitrogen	other biological processes	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	response to peptide hormone stimulus	other biological processes	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes2_c5048	regulation of apoptosis	death	P	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)
ruditapes_s33464	"transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	negative regulation of transcription factor activity	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	negative regulation of transcription factor activity	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	B cell differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	"transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	mRNA metabolic process	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	liver development	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	liver development	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	positive regulation of interferon-gamma biosynthetic process	other metabolic processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	immune response	other biological processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	positive regulation of interferon-gamma biosynthetic process	other metabolic processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	positive regulation of DNA repair	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	positive regulation of DNA repair	DNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	positive regulation of interferon-gamma biosynthetic process	other metabolic processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	B cell differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	chromatin remodeling	cell organization and biogenesis	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	positive regulation of DNA repair	DNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	chromatin remodeling	cell organization and biogenesis	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	B cell differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	chromatin remodeling	cell organization and biogenesis	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	nucleosome disassembly	cell organization and biogenesis	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	liver development	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	nucleosome disassembly	cell organization and biogenesis	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	positive regulation of DNA repair	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	positive regulation of interferon-gamma biosynthetic process	other metabolic processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	liver development	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	natural killer cell mediated cytotoxicity	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	natural killer cell mediated cytotoxicity	death	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	"transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	positive regulation of DNA repair	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	positive regulation of DNA repair	DNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	negative regulation of transcription factor activity	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	enucleate erythrocyte differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	enucleate erythrocyte differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	mRNA metabolic process	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	chromatin remodeling	cell organization and biogenesis	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	negative regulation of transcription factor activity	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	positive regulation of DNA repair	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	positive regulation of DNA repair	DNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	chromatin remodeling	cell organization and biogenesis	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	enucleate erythrocyte differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	mRNA metabolic process	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	nucleosome disassembly	cell organization and biogenesis	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	immune response	other biological processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	immune response	other biological processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	natural killer cell mediated cytotoxicity	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	natural killer cell mediated cytotoxicity	death	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	nucleosome disassembly	cell organization and biogenesis	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	natural killer cell mediated cytotoxicity	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	natural killer cell mediated cytotoxicity	death	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	liver development	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	B cell differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	immune response	other biological processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	nucleosome disassembly	cell organization and biogenesis	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	immune response	other biological processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	natural killer cell mediated cytotoxicity	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	natural killer cell mediated cytotoxicity	death	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	B cell differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	negative regulation of transcription factor activity	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	positive regulation of DNA repair	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	positive regulation of DNA repair	DNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	"transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	mRNA metabolic process	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	enucleate erythrocyte differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc37775	enucleate erythrocyte differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_lrc28826	mRNA metabolic process	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	natural killer cell mediated cytotoxicity	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c1117	natural killer cell mediated cytotoxicity	death	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_s33464	positive regulation of interferon-gamma biosynthetic process	other metabolic processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes2_c79	"transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)
ruditapes_c14457	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein zeta (CCAAT-box-binding transcription factor) (CBF) (CCAAT-binding factor)
ruditapes_c14457	"transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein zeta (CCAAT-box-binding transcription factor) (CBF) (CCAAT-binding factor)
ruditapes_c5068	nitrogen fixation	other metabolic processes	P	Protein FixC
ruditapes_c5068	oxidation reduction	other metabolic processes	P	Protein FixC
ruditapes_c5068	metabolic process	other metabolic processes	P	Protein FixC
ruditapes_c13911	metabolic process	other metabolic processes	P	Uncharacterized protein MCAP
ruditapes_c17253	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase isoform 2 (CDPK 2) (EC 2.7.11.1)
ruditapes_c17253	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase isoform 2 (CDPK 2) (EC 2.7.11.1)
ruditapes_c28200	carbohydrate metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (Hexosephosphate aminotransferase)
ruditapes_c28200	hyphal growth	other biological processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (Hexosephosphate aminotransferase)
ruditapes_c28200	chitin biosynthetic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (Hexosephosphate aminotransferase)
ruditapes_c28200	cell wall chitin biosynthetic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (Hexosephosphate aminotransferase)
ruditapes_c28200	protein amino acid N-linked glycosylation	protein metabolism	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (Hexosephosphate aminotransferase)
ruditapes_c28200	glucosamine biosynthetic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (Hexosephosphate aminotransferase)
ruditapes_c28200	glutamine metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (Hexosephosphate aminotransferase)
ruditapes_c28200	metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (Hexosephosphate aminotransferase)
ruditapes_c5815	biological_process	other biological processes	P	Bypass of stop codon protein 5
ruditapes_c10851	carbohydrate metabolic process	other metabolic processes	P	Uncharacterized isomerase YNR071C (EC 5.-.-.-)
ruditapes_c10851	hexose metabolic process	other metabolic processes	P	Uncharacterized isomerase YNR071C (EC 5.-.-.-)
ruditapes_c10851	biological_process	other biological processes	P	Uncharacterized isomerase YNR071C (EC 5.-.-.-)
ruditapes2_c1157	oxidation reduction	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes2_c1157	biosynthetic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes2_c1157	metabolic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes2_c1157	isoprenoid biosynthetic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes2_c1157	lipid biosynthetic process	other metabolic processes	P	Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase)
ruditapes_c22271	transcription initiation from RNA polymerase I promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	transcription initiation from RNA polymerase I promoter	cell organization and biogenesis	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	RNA splicing	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	RNA elongation from RNA polymerase III promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	termination of RNA polymerase I transcription	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	mRNA capping	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	transcription-coupled nucleotide-excision repair	stress response	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	transcription-coupled nucleotide-excision repair	DNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	nucleotide-excision repair	stress response	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	nucleotide-excision repair	DNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	regulation of transcription from RNA polymerase I promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	positive regulation of viral transcription	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	transcription from RNA polymerase III promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	RNA elongation from RNA polymerase I promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	RNA elongation from RNA polymerase II promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	DNA repair	stress response	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	DNA repair	DNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	transcription from RNA polymerase I promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	gene expression	other metabolic processes	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	termination of RNA polymerase III transcription	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	termination of RNA polymerase III transcription	cell organization and biogenesis	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	transcription initiation from RNA polymerase II promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	termination of RNA polymerase I transcription	cell organization and biogenesis	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	transcription from RNA polymerase II promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	viral reproduction	other biological processes	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c22271	"transcription, DNA-dependent"	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RNA polymerases I, II, and III subunit ABC4) (ABC10-alpha) (DNA-directed RNA polymerase II subunit K) (RNA polymerase II 7.0 kDa subunit) (RPB7.0) (RPB10alpha)"
ruditapes_c10378	negative regulation of cell cycle	cell cycle and proliferation	P	HRAS-like suppressor 3 (HRSL3) (EC 3.1.1.32) (EC 3.1.1.4) (Group XVI phospholipase A1/A2) (H-rev 107 protein)
ruditapes_c10378	lipid catabolic process	other metabolic processes	P	HRAS-like suppressor 3 (HRSL3) (EC 3.1.1.32) (EC 3.1.1.4) (Group XVI phospholipase A1/A2) (H-rev 107 protein)
ruditapes_c22778	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	Elongin-A
ruditapes_c22778	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Elongin-A
ruditapes_c5525	GTP catabolic process	other metabolic processes	P	GTP-binding protein RHO5
ruditapes_c5525	small GTPase mediated signal transduction	signal transduction	P	GTP-binding protein RHO5
ruditapes_c20889	pheromone-dependent signal transduction involved in conjugation with cellular fusion	signal transduction	P	Signal transduction protein MDG1 (Multicopy suppressor of defective G-protein 1)
ruditapes_c11098	biological_process	other biological processes	P	Uncharacterized protein YNL108C
ruditapes2_c1273	multidrug transport	transport	P	Probable transporter AQR1
ruditapes2_c1273	monocarboxylic acid transport	transport	P	Probable transporter AQR1
ruditapes2_c1273	transmembrane transport	transport	P	Probable transporter AQR1
ruditapes2_c1273	transport	transport	P	Probable transporter AQR1
ruditapes2_c1273	amino acid export	transport	P	Probable transporter AQR1
ruditapes_c12370	establishment or maintenance of chromatin architecture during transcription	cell organization and biogenesis	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	negative regulation of transcription by transcription factor localization	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	regulation of chromatin silencing at telomere	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	histone deacetylation	cell organization and biogenesis	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	gene silencing involved in chronological cell aging	other metabolic processes	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	"transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	establishment or maintenance of chromatin architecture during transcription	cell organization and biogenesis	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	negative regulation of transcription by transcription factor localization	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	histone deacetylation	protein metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	regulation of chromatin silencing at telomere	cell organization and biogenesis	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	loss of chromatin silencing during replicative cell aging	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	loss of chromatin silencing during replicative cell aging	cell organization and biogenesis	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	gene silencing by RNA	other metabolic processes	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	chromatin modification	cell organization and biogenesis	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	"transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	chromatin modification	cell organization and biogenesis	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	loss of chromatin silencing during replicative cell aging	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	loss of chromatin silencing during replicative cell aging	cell organization and biogenesis	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	regulation of chromatin silencing at telomere	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	regulation of chromatin silencing at telomere	cell organization and biogenesis	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	histone deacetylation	protein metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	histone deacetylation	cell organization and biogenesis	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	gene silencing by RNA	other metabolic processes	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c12370	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_s40275	gene silencing involved in chronological cell aging	other metabolic processes	P	Histone deacetylase HDA1 (EC 3.5.1.98)
ruditapes_c14833	protein amino acid phosphorylation	protein metabolism	P	Actin-regulating kinase 1 (EC 2.7.11.1)
ruditapes_c14833	actin cortical patch assembly	cell organization and biogenesis	P	Actin-regulating kinase 1 (EC 2.7.11.1)
ruditapes_c14833	cytokinesis	other biological processes	P	Actin-regulating kinase 1 (EC 2.7.11.1)
ruditapes_c14833	regulation of endocytosis	transport	P	Actin-regulating kinase 1 (EC 2.7.11.1)
ruditapes_c14833	regulation of endocytosis	cell organization and biogenesis	P	Actin-regulating kinase 1 (EC 2.7.11.1)
ruditapes_c14833	phosphorylation	other metabolic processes	P	Actin-regulating kinase 1 (EC 2.7.11.1)
ruditapes_c14833	actin filament organization	cell organization and biogenesis	P	Actin-regulating kinase 1 (EC 2.7.11.1)
ruditapes_c1122	protein ubiquitination	protein metabolism	P	Protein ASI3 (Amino acid sensor-independent protein 3)
ruditapes_c1122	ubiquitin-dependent protein catabolic process	protein metabolism	P	Protein ASI3 (Amino acid sensor-independent protein 3)
ruditapes_c14666	protein transport	transport	P	Ras-related protein Rab-2A
ruditapes_c14666	transport	transport	P	Ras-related protein Rab-2A
ruditapes_c14666	vesicle-mediated transport	transport	P	Ras-related protein Rab-2A
ruditapes_c14666	GTP catabolic process	other metabolic processes	P	Ras-related protein Rab-2A
ruditapes_c14666	intracellular protein transport	transport	P	Ras-related protein Rab-2A
ruditapes_c14666	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-2A
ruditapes2_c2944	cell cycle	cell cycle and proliferation	P	Anaphase-promoting complex subunit 1 (APC1) (Cyclosome subunit 1) (Mitotic checkpoint regulator) (Testis-specific gene 24 protein)
ruditapes2_c2944	cell division	other biological processes	P	Anaphase-promoting complex subunit 1 (APC1) (Cyclosome subunit 1) (Mitotic checkpoint regulator) (Testis-specific gene 24 protein)
ruditapes2_c2944	mitosis	cell cycle and proliferation	P	Anaphase-promoting complex subunit 1 (APC1) (Cyclosome subunit 1) (Mitotic checkpoint regulator) (Testis-specific gene 24 protein)
ruditapes2_c2944	mitosis	cell organization and biogenesis	P	Anaphase-promoting complex subunit 1 (APC1) (Cyclosome subunit 1) (Mitotic checkpoint regulator) (Testis-specific gene 24 protein)
ruditapes_c166	isocitrate metabolic process	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)"
ruditapes_c166	tricarboxylic acid cycle	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)"
ruditapes_c166	response to stress	stress response	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)"
ruditapes_c166	glyoxylate cycle	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)"
ruditapes_c166	oxidation reduction	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)"
ruditapes_c166	2-oxoglutarate metabolic process	other metabolic processes	P	"Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)"
ruditapes_c10422	interspecies interaction between organisms	other biological processes	P	Capsid protein (CA1) (Coat protein)
ruditapes_c9593	mitochondrial DNA replication	DNA metabolism	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c9593	mitochondrial DNA replication	cell organization and biogenesis	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c9593	cell death	death	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c9593	DNA replication	DNA metabolism	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c9593	DNA metabolic process	DNA metabolism	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c9593	DNA-dependent DNA replication	DNA metabolism	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c9593	"base-excision repair, gap-filling"	stress response	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c9593	"base-excision repair, gap-filling"	DNA metabolism	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c9593	metabolic process	other metabolic processes	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c9593	aging	other biological processes	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c4687	cell development	other biological processes	P	Proto-oncogene vav (p95)
ruditapes_c4687	immune response-regulating cell surface receptor signaling pathway	signal transduction	P	Proto-oncogene vav (p95)
ruditapes_c4687	regulation of Rho protein signal transduction	signal transduction	P	Proto-oncogene vav (p95)
ruditapes_c15048	sensory perception of chemical stimulus	other biological processes	P	Serpentine receptor class gamma-6 (Protein srg-6)
ruditapes_c31342	protein metabolic process	protein metabolism	P	Mitochondrial peptide methionine sulfoxide reductase (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) (Protein-methionine-S-oxide reductase)
ruditapes_c31342	oxidation reduction	other metabolic processes	P	Mitochondrial peptide methionine sulfoxide reductase (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) (Protein-methionine-S-oxide reductase)
ruditapes_c27679	metabolic process	other metabolic processes	P	Endochitinase 2 (EC 3.2.1.14)
ruditapes_c27679	polysaccharide catabolic process	other metabolic processes	P	Endochitinase 2 (EC 3.2.1.14)
ruditapes_c27679	carbohydrate metabolic process	other metabolic processes	P	Endochitinase 2 (EC 3.2.1.14)
ruditapes_c27679	chitin catabolic process	other metabolic processes	P	Endochitinase 2 (EC 3.2.1.14)
ruditapes_c28082	anatomical structure morphogenesis	other biological processes	P	Protein HIRA (TUP1-like enhancer of split protein 1)
ruditapes_c28082	gastrulation	developmental processes	P	Protein HIRA (TUP1-like enhancer of split protein 1)
ruditapes_c28082	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein HIRA (TUP1-like enhancer of split protein 1)
ruditapes_c28082	"transcription, DNA-dependent"	RNA metabolism	P	Protein HIRA (TUP1-like enhancer of split protein 1)
ruditapes_c28082	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein HIRA (TUP1-like enhancer of split protein 1)
ruditapes_c28082	chromatin modification	cell organization and biogenesis	P	Protein HIRA (TUP1-like enhancer of split protein 1)
ruditapes_c4577	one-carbon compound metabolic process	other metabolic processes	P	Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)
ruditapes_c14879	one-carbon compound metabolic process	other metabolic processes	P	Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)
ruditapes_c14879	response to stress	stress response	P	Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)
ruditapes_c4577	response to stress	stress response	P	Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)
ruditapes_lrc31111	ion transport	transport	P	Acetylcholine receptor non-alpha chain (Fragment)
ruditapes_lrc31111	transport	transport	P	Acetylcholine receptor non-alpha chain (Fragment)
ruditapes_c26936	mismatch repair	stress response	P	PMS1 protein homolog 1 (DNA mismatch repair protein PMS1)
ruditapes_c26936	mismatch repair	DNA metabolism	P	PMS1 protein homolog 1 (DNA mismatch repair protein PMS1)
ruditapes_c26936	reciprocal meiotic recombination	cell cycle and proliferation	P	PMS1 protein homolog 1 (DNA mismatch repair protein PMS1)
ruditapes_c26936	reciprocal meiotic recombination	DNA metabolism	P	PMS1 protein homolog 1 (DNA mismatch repair protein PMS1)
ruditapes_c26936	DNA repair	stress response	P	PMS1 protein homolog 1 (DNA mismatch repair protein PMS1)
ruditapes_c26936	DNA repair	DNA metabolism	P	PMS1 protein homolog 1 (DNA mismatch repair protein PMS1)
ruditapes_c26936	response to DNA damage stimulus	stress response	P	PMS1 protein homolog 1 (DNA mismatch repair protein PMS1)
ruditapes_c26936	ATP catabolic process	other metabolic processes	P	PMS1 protein homolog 1 (DNA mismatch repair protein PMS1)
ruditapes_c8143	response to DNA damage stimulus	stress response	P	Mismatch repair endonuclease PMS2 (DNA mismatch repair protein PMS2) (PMS1 protein homolog 2)
ruditapes_c8143	mismatch repair	stress response	P	Mismatch repair endonuclease PMS2 (DNA mismatch repair protein PMS2) (PMS1 protein homolog 2)
ruditapes_c8143	mismatch repair	DNA metabolism	P	Mismatch repair endonuclease PMS2 (DNA mismatch repair protein PMS2) (PMS1 protein homolog 2)
ruditapes_c8143	DNA repair	stress response	P	Mismatch repair endonuclease PMS2 (DNA mismatch repair protein PMS2) (PMS1 protein homolog 2)
ruditapes_c8143	DNA repair	DNA metabolism	P	Mismatch repair endonuclease PMS2 (DNA mismatch repair protein PMS2) (PMS1 protein homolog 2)
ruditapes_c12425	muscle contraction	other biological processes	P	Myomesin-2 (165 kDa connectin-associated protein) (165 kDa titin-associated protein) (M-protein) (Myomesin family member 2)
ruditapes_c611	response to peptide hormone stimulus	other biological processes	P	Inactive pancreatic lipase-related protein 1 (PL-RP1)
ruditapes_c611	pancreas development	developmental processes	P	Inactive pancreatic lipase-related protein 1 (PL-RP1)
ruditapes_c611	lipid metabolic process	other metabolic processes	P	Inactive pancreatic lipase-related protein 1 (PL-RP1)
ruditapes_c611	response to glucocorticoid stimulus	other biological processes	P	Inactive pancreatic lipase-related protein 1 (PL-RP1)
ruditapes_c27040	lipid digestion	other biological processes	P	Pancreatic lipase-related protein 2 (PL-RP2) (EC 3.1.1.26) (EC 3.1.1.3) (Galactolipase)
ruditapes_c27040	lipid catabolic process	other metabolic processes	P	Pancreatic lipase-related protein 2 (PL-RP2) (EC 3.1.1.26) (EC 3.1.1.3) (Galactolipase)
ruditapes_c27040	triglyceride metabolic process	other metabolic processes	P	Pancreatic lipase-related protein 2 (PL-RP2) (EC 3.1.1.26) (EC 3.1.1.3) (Galactolipase)
ruditapes_c27040	lipid metabolic process	other metabolic processes	P	Pancreatic lipase-related protein 2 (PL-RP2) (EC 3.1.1.26) (EC 3.1.1.3) (Galactolipase)
ruditapes_c27040	galactolipid catabolic process	other metabolic processes	P	Pancreatic lipase-related protein 2 (PL-RP2) (EC 3.1.1.26) (EC 3.1.1.3) (Galactolipase)
ruditapes_c27040	phospholipid catabolic process	other metabolic processes	P	Pancreatic lipase-related protein 2 (PL-RP2) (EC 3.1.1.26) (EC 3.1.1.3) (Galactolipase)
ruditapes_c26835	intracellular transport	transport	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	lysosomal transport	transport	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	determination of adult life span	developmental processes	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	transport	transport	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	intracellular protein transport	transport	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	eye pigment biosynthetic process	other metabolic processes	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	ocellus pigment biosynthetic process	other metabolic processes	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	protein transport	transport	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	compound eye pigmentation	other biological processes	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	eye pigment granule organization	cell organization and biogenesis	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	Golgi to endosome transport	transport	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	ommochrome biosynthetic process	other metabolic processes	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c26835	vesicle-mediated transport	transport	P	AP-3 complex subunit delta (Delta adaptin subunit of AP-3) (Delta-adaptin) (Garnet protein)
ruditapes_c16381	microtubule-based process	other biological processes	P	Tubulin gamma chain (Gamma-tubulin)
ruditapes_c16381	GTP catabolic process	other metabolic processes	P	Tubulin gamma chain (Gamma-tubulin)
ruditapes_c16381	protein polymerization	cell organization and biogenesis	P	Tubulin gamma chain (Gamma-tubulin)
ruditapes_c10578	metabolic process	other metabolic processes	P	Probable phosphate butyryltransferase (EC 2.3.1.19) (Phosphotransbutyrylase)
ruditapes_c433	transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (V-ATPase 26 kDa subunit) (Vacuolar proton pump subunit E)
ruditapes_c433	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (V-ATPase 26 kDa subunit) (Vacuolar proton pump subunit E)
ruditapes_c433	proton transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (V-ATPase 26 kDa subunit) (Vacuolar proton pump subunit E)
ruditapes_c433	ion transport	transport	P	V-type proton ATPase subunit E (V-ATPase subunit E) (V-ATPase 26 kDa subunit) (Vacuolar proton pump subunit E)
ruditapes_c18736	proteolysis	protein metabolism	P	Cysteine proteinase 5 (EC 3.4.22.-)
ruditapes_c35297	proteolysis	protein metabolism	P	Cysteine proteinase 5 (EC 3.4.22.-)
ruditapes_c25193	phosphoinositide-mediated signaling	signal transduction	P	RAC family serine/threonine-protein kinase homolog (EC 2.7.11.1)
ruditapes_c25193	culmination during sorocarp development	stress response	P	RAC family serine/threonine-protein kinase homolog (EC 2.7.11.1)
ruditapes_c25193	culmination during sorocarp development	developmental processes	P	RAC family serine/threonine-protein kinase homolog (EC 2.7.11.1)
ruditapes_c25193	protein amino acid phosphorylation	protein metabolism	P	RAC family serine/threonine-protein kinase homolog (EC 2.7.11.1)
ruditapes_c25193	chemotaxis	other biological processes	P	RAC family serine/threonine-protein kinase homolog (EC 2.7.11.1)
ruditapes_c25193	myosin II filament assembly	cell organization and biogenesis	P	RAC family serine/threonine-protein kinase homolog (EC 2.7.11.1)
ruditapes_c25193	regulation of protein kinase activity	other metabolic processes	P	RAC family serine/threonine-protein kinase homolog (EC 2.7.11.1)
ruditapes_c25193	phosphorylation	other metabolic processes	P	RAC family serine/threonine-protein kinase homolog (EC 2.7.11.1)
ruditapes_c25193	establishment or maintenance of cell polarity	cell organization and biogenesis	P	RAC family serine/threonine-protein kinase homolog (EC 2.7.11.1)
ruditapes_c31660	intracellular protein transport	transport	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Clathrin-adaptor medium chain Apm2) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein)
ruditapes_c31660	transport	transport	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Clathrin-adaptor medium chain Apm2) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein)
ruditapes_c31660	vesicle-mediated transport	transport	P	AP-2 complex subunit mu (Clathrin assembly protein complex 2 medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (Clathrin-adaptor medium chain Apm2) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein)
ruditapes2_c2724	proteolysis	protein metabolism	P	Serine protease/ABC transporter B family protein tagB (EC 3.4.21.-) (Prestalk-specific protein tagB)
ruditapes2_c2724	transmembrane transport	transport	P	Serine protease/ABC transporter B family protein tagB (EC 3.4.21.-) (Prestalk-specific protein tagB)
ruditapes2_c2724	regulation of cell differentiation	other biological processes	P	Serine protease/ABC transporter B family protein tagB (EC 3.4.21.-) (Prestalk-specific protein tagB)
ruditapes2_c2724	transport	transport	P	Serine protease/ABC transporter B family protein tagB (EC 3.4.21.-) (Prestalk-specific protein tagB)
ruditapes2_c2724	multicellular organismal development	developmental processes	P	Serine protease/ABC transporter B family protein tagB (EC 3.4.21.-) (Prestalk-specific protein tagB)
ruditapes2_c2724	sorocarp development	stress response	P	Serine protease/ABC transporter B family protein tagB (EC 3.4.21.-) (Prestalk-specific protein tagB)
ruditapes2_c2724	sorocarp development	developmental processes	P	Serine protease/ABC transporter B family protein tagB (EC 3.4.21.-) (Prestalk-specific protein tagB)
ruditapes2_c2724	ATP catabolic process	other metabolic processes	P	Serine protease/ABC transporter B family protein tagB (EC 3.4.21.-) (Prestalk-specific protein tagB)
ruditapes_lrc19844	protein transport	transport	P	Flagellar biosynthetic protein FliR
ruditapes_lrc19844	protein targeting	transport	P	Flagellar biosynthetic protein FliR
ruditapes_c31234	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YfiF
ruditapes_c31234	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YfiF
ruditapes_lrc23040	lipid biosynthetic process	other metabolic processes	P	Cytochrome P450 61 (EC 1.14.-.-) (C-22 sterol desaturase)
ruditapes_lrc23040	oxidation reduction	other metabolic processes	P	Cytochrome P450 61 (EC 1.14.-.-) (C-22 sterol desaturase)
ruditapes_lrc23040	sterol biosynthetic process	other metabolic processes	P	Cytochrome P450 61 (EC 1.14.-.-) (C-22 sterol desaturase)
ruditapes_lrc23040	ergosterol biosynthetic process	other metabolic processes	P	Cytochrome P450 61 (EC 1.14.-.-) (C-22 sterol desaturase)
ruditapes_lrc23040	steroid biosynthetic process	other metabolic processes	P	Cytochrome P450 61 (EC 1.14.-.-) (C-22 sterol desaturase)
ruditapes2_c3439	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcriptional activator/repressor MOT3 (Hypoxic gene repressor protein 7) (Modulator of transcription protein 3)
ruditapes2_c3439	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator/repressor MOT3 (Hypoxic gene repressor protein 7) (Modulator of transcription protein 3)
ruditapes2_c3439	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator/repressor MOT3 (Hypoxic gene repressor protein 7) (Modulator of transcription protein 3)
ruditapes2_c3439	negative regulation of ergosterol biosynthetic process	other metabolic processes	P	Transcriptional activator/repressor MOT3 (Hypoxic gene repressor protein 7) (Modulator of transcription protein 3)
ruditapes2_c3439	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcriptional activator/repressor MOT3 (Hypoxic gene repressor protein 7) (Modulator of transcription protein 3)
ruditapes_c27331	DNA replication	DNA metabolism	P	Origin recognition complex subunit 1
ruditapes_c22126	chromatin silencing at silent mating-type cassette	RNA metabolism	P	Origin recognition complex subunit 3 (Origin recognition complex 62 kDa subunit)
ruditapes_c22126	DNA replication initiation	DNA metabolism	P	Origin recognition complex subunit 3 (Origin recognition complex 62 kDa subunit)
ruditapes_c22126	pre-replicative complex assembly	DNA metabolism	P	Origin recognition complex subunit 3 (Origin recognition complex 62 kDa subunit)
ruditapes_c22126	pre-replicative complex assembly	cell organization and biogenesis	P	Origin recognition complex subunit 3 (Origin recognition complex 62 kDa subunit)
ruditapes_c22126	DNA replication	DNA metabolism	P	Origin recognition complex subunit 3 (Origin recognition complex 62 kDa subunit)
ruditapes_c24865	lysosome organization	cell organization and biogenesis	P	Alpha-N-acetylglucosaminidase (EC 3.2.1.50) (N-acetyl-alpha-glucosaminidase) (NAG) [Cleaved into: Alpha-N-acetylglucosaminidase 82 kDa form; Alpha-N-acetylglucosaminidase 77 kDa form]
ruditapes_c24865	metabolic process	other metabolic processes	P	Alpha-N-acetylglucosaminidase (EC 3.2.1.50) (N-acetyl-alpha-glucosaminidase) (NAG) [Cleaved into: Alpha-N-acetylglucosaminidase 82 kDa form; Alpha-N-acetylglucosaminidase 77 kDa form]
ruditapes_c24865	nervous system development	developmental processes	P	Alpha-N-acetylglucosaminidase (EC 3.2.1.50) (N-acetyl-alpha-glucosaminidase) (NAG) [Cleaved into: Alpha-N-acetylglucosaminidase 82 kDa form; Alpha-N-acetylglucosaminidase 77 kDa form]
ruditapes_c24865	cerebellar Purkinje cell layer development	developmental processes	P	Alpha-N-acetylglucosaminidase (EC 3.2.1.50) (N-acetyl-alpha-glucosaminidase) (NAG) [Cleaved into: Alpha-N-acetylglucosaminidase 82 kDa form; Alpha-N-acetylglucosaminidase 77 kDa form]
ruditapes_c24865	retinal rod cell development	developmental processes	P	Alpha-N-acetylglucosaminidase (EC 3.2.1.50) (N-acetyl-alpha-glucosaminidase) (NAG) [Cleaved into: Alpha-N-acetylglucosaminidase 82 kDa form; Alpha-N-acetylglucosaminidase 77 kDa form]
ruditapes_c24865	middle ear morphogenesis	developmental processes	P	Alpha-N-acetylglucosaminidase (EC 3.2.1.50) (N-acetyl-alpha-glucosaminidase) (NAG) [Cleaved into: Alpha-N-acetylglucosaminidase 82 kDa form; Alpha-N-acetylglucosaminidase 77 kDa form]
ruditapes_c24865	locomotor rhythm	other biological processes	P	Alpha-N-acetylglucosaminidase (EC 3.2.1.50) (N-acetyl-alpha-glucosaminidase) (NAG) [Cleaved into: Alpha-N-acetylglucosaminidase 82 kDa form; Alpha-N-acetylglucosaminidase 77 kDa form]
ruditapes_c24865	inner ear receptor cell development	developmental processes	P	Alpha-N-acetylglucosaminidase (EC 3.2.1.50) (N-acetyl-alpha-glucosaminidase) (NAG) [Cleaved into: Alpha-N-acetylglucosaminidase 82 kDa form; Alpha-N-acetylglucosaminidase 77 kDa form]
ruditapes_c30763	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nitrogen fixation nifHD1 region GlnB-like protein 1 (ORF-105)
ruditapes_c30763	nitrogen fixation	other metabolic processes	P	Nitrogen fixation nifHD1 region GlnB-like protein 1 (ORF-105)
ruditapes_c30763	regulation of nitrogen utilization	other metabolic processes	P	Nitrogen fixation nifHD1 region GlnB-like protein 1 (ORF-105)
ruditapes_c30763	regulation of catalytic activity	other biological processes	P	Nitrogen fixation nifHD1 region GlnB-like protein 1 (ORF-105)
ruditapes_c30763	"transcription, DNA-dependent"	RNA metabolism	P	Nitrogen fixation nifHD1 region GlnB-like protein 1 (ORF-105)
ruditapes_c12133	cell growth	other biological processes	P	Epithelial membrane protein 1 (EMP-1) (Squamous cell-specific protein CL-20) (Tumor-associated membrane protein)
ruditapes2_c5777	cell growth	other biological processes	P	Epithelial membrane protein 1 (EMP-1) (Squamous cell-specific protein CL-20) (Tumor-associated membrane protein)
ruditapes_c17077	steroid biosynthetic process	other metabolic processes	P	Hydroxymethylglutaryl-CoA synthase 2 (HMG-CoA synthase 2) (EC 2.3.3.10) (3-hydroxy-3-methylglutaryl coenzyme A synthase 2)
ruditapes_c17077	sterol biosynthetic process	other metabolic processes	P	Hydroxymethylglutaryl-CoA synthase 2 (HMG-CoA synthase 2) (EC 2.3.3.10) (3-hydroxy-3-methylglutaryl coenzyme A synthase 2)
ruditapes_c17077	isoprenoid biosynthetic process	other metabolic processes	P	Hydroxymethylglutaryl-CoA synthase 2 (HMG-CoA synthase 2) (EC 2.3.3.10) (3-hydroxy-3-methylglutaryl coenzyme A synthase 2)
ruditapes_c17077	metabolic process	other metabolic processes	P	Hydroxymethylglutaryl-CoA synthase 2 (HMG-CoA synthase 2) (EC 2.3.3.10) (3-hydroxy-3-methylglutaryl coenzyme A synthase 2)
ruditapes_c17077	lipid biosynthetic process	other metabolic processes	P	Hydroxymethylglutaryl-CoA synthase 2 (HMG-CoA synthase 2) (EC 2.3.3.10) (3-hydroxy-3-methylglutaryl coenzyme A synthase 2)
ruditapes_c2857	viral genome replication	other biological processes	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_c2857	mRNA methylation	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_c6095	viral genome replication	other biological processes	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_lrc35466	oxidation reduction	other metabolic processes	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_c2857	oxidation reduction	other metabolic processes	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_c6095	mRNA methylation	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_c2857	RNA processing	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_c6095	oxidation reduction	other metabolic processes	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_c6095	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_c2857	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_lrc35466	mRNA methylation	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_c6095	RNA processing	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_lrc35466	viral genome replication	other biological processes	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_c2857	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_lrc35466	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_lrc35466	RNA processing	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_c6095	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_lrc35466	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)
ruditapes_lrc34815	oxidation reduction	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_lrc34815	metabolic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_lrc34815	proline biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_lrc34815	cellular amino acid biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes2_lrc7298	"transcription, DNA-dependent"	RNA metabolism	P	Nif-specific regulatory protein
ruditapes_lrc36586	two-component signal transduction system (phosphorelay)	signal transduction	P	Nif-specific regulatory protein
ruditapes_lrc36586	nitrogen fixation	other metabolic processes	P	Nif-specific regulatory protein
ruditapes2_lrc7298	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nif-specific regulatory protein
ruditapes_lrc36586	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nif-specific regulatory protein
ruditapes_lrc39025	"transcription, DNA-dependent"	RNA metabolism	P	Nif-specific regulatory protein
ruditapes_lrc39025	two-component signal transduction system (phosphorelay)	signal transduction	P	Nif-specific regulatory protein
ruditapes_lrc36586	"transcription, DNA-dependent"	RNA metabolism	P	Nif-specific regulatory protein
ruditapes_lrc39025	nitrogen fixation	other metabolic processes	P	Nif-specific regulatory protein
ruditapes_lrc39025	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nif-specific regulatory protein
ruditapes2_lrc7298	two-component signal transduction system (phosphorelay)	signal transduction	P	Nif-specific regulatory protein
ruditapes2_lrc7298	nitrogen fixation	other metabolic processes	P	Nif-specific regulatory protein
ruditapes_c27978	transport	transport	P	Protein RdxB
ruditapes_c27978	electron transport chain	other metabolic processes	P	Protein RdxB
ruditapes_lrc30479	translation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes_lrc30479	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes_lrc30479	translational elongation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes_lrc32844	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_c2264	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_lrc3825	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c3221	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c3221	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc34710	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc32844	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_c2264	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc34710	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_lrc3825	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c2090	oxidation reduction	other metabolic processes	P	Retinol dehydrogenase 7 (EC 1.1.1.105) (Retinol dehydrogenase type III) (RODH III)
ruditapes2_c2090	metabolic process	other metabolic processes	P	Retinol dehydrogenase 7 (EC 1.1.1.105) (Retinol dehydrogenase type III) (RODH III)
ruditapes_c24339	actin filament bundle formation	cell organization and biogenesis	P	Allograft inflammatory factor 1 (AIF-1) (Ionized calcium-binding adapter molecule 1) (MRF-1) (Microglia response factor)
ruditapes_c80	actin filament bundle formation	cell organization and biogenesis	P	Allograft inflammatory factor 1 (AIF-1) (Ionized calcium-binding adapter molecule 1) (MRF-1) (Microglia response factor)
ruditapes_c3986	actin filament bundle formation	cell organization and biogenesis	P	Allograft inflammatory factor 1 (AIF-1) (Ionized calcium-binding adapter molecule 1) (MRF-1) (Microglia response factor)
ruditapes_c25625	translation	protein metabolism	P	Eukaryotic translation initiation factor 5 (eIF-5)
ruditapes_c25625	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 5 (eIF-5)
ruditapes_c25625	GTP catabolic process	other metabolic processes	P	Eukaryotic translation initiation factor 5 (eIF-5)
ruditapes_c25625	cellular protein metabolic process	protein metabolism	P	Eukaryotic translation initiation factor 5 (eIF-5)
ruditapes_c25625	RNA metabolic process	RNA metabolism	P	Eukaryotic translation initiation factor 5 (eIF-5)
ruditapes_c25625	gene expression	other metabolic processes	P	Eukaryotic translation initiation factor 5 (eIF-5)
ruditapes_c25625	regulation of translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 5 (eIF-5)
ruditapes_c16683	potassium ion transport	transport	P	Solute carrier family 12 member 2 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 1) (NKCC) (Na-K-CL symporter)
ruditapes_c16683	transport	transport	P	Solute carrier family 12 member 2 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 1) (NKCC) (Na-K-CL symporter)
ruditapes_c16683	transmembrane transport	transport	P	Solute carrier family 12 member 2 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 1) (NKCC) (Na-K-CL symporter)
ruditapes_c16683	ion transport	transport	P	Solute carrier family 12 member 2 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 1) (NKCC) (Na-K-CL symporter)
ruditapes_c16683	sodium ion transport	transport	P	Solute carrier family 12 member 2 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 1) (NKCC) (Na-K-CL symporter)
ruditapes_c16683	chloride transport	transport	P	Solute carrier family 12 member 2 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 1) (NKCC) (Na-K-CL symporter)
ruditapes_c27072	transmembrane transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c27072	ion transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c27072	sodium ion transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c27072	renal sodium ion absorption	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c27072	kidney development	developmental processes	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c27072	transmembrane ion transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c27072	chloride transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c27072	transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c27072	chemical homeostasis	other biological processes	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c27072	potassium ion transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c27072	excretion	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c23973	oxidation reduction	other metabolic processes	P	Tyrosinase (EC 1.14.18.1) (Monophenol monooxygenase) (Fragment)
ruditapes_c23973	melanin biosynthetic process	other metabolic processes	P	Tyrosinase (EC 1.14.18.1) (Monophenol monooxygenase) (Fragment)
ruditapes_c23973	metabolic process	other metabolic processes	P	Tyrosinase (EC 1.14.18.1) (Monophenol monooxygenase) (Fragment)
ruditapes2_c749	lipid catabolic process	other metabolic processes	P	Lipoprotein lipase (LPL) (EC 3.1.1.34)
ruditapes2_c749	lipid metabolic process	other metabolic processes	P	Lipoprotein lipase (LPL) (EC 3.1.1.34)
ruditapes_lrc22946	cellular amino acid biosynthetic process	other metabolic processes	P	Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_lrc22946	nitrogen compound metabolic process	other metabolic processes	P	Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_lrc22946	glutamine metabolic process	other metabolic processes	P	Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_lrc22946	glutamate biosynthetic process	other metabolic processes	P	Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_lrc22946	oxidation reduction	other metabolic processes	P	Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_lrc22946	metabolic process	other metabolic processes	P	Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1) (Fd-GOGAT)
ruditapes_c21208	GTP catabolic process	other metabolic processes	P	GTP-binding protein RAD (RAD1) (Ras associated with diabetes)
ruditapes_c21208	small GTPase mediated signal transduction	signal transduction	P	GTP-binding protein RAD (RAD1) (Ras associated with diabetes)
ruditapes_c21208	negative regulation of cell growth	other biological processes	P	GTP-binding protein RAD (RAD1) (Ras associated with diabetes)
ruditapes_c21208	signal transduction	signal transduction	P	GTP-binding protein RAD (RAD1) (Ras associated with diabetes)
ruditapes2_c1568	epithelial cell proliferation	cell cycle and proliferation	P	"Fatty acid-binding protein, brain (Brain lipid-binding protein) (BLBP) (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes2_c1568	prepulse inhibition	other biological processes	P	"Fatty acid-binding protein, brain (Brain lipid-binding protein) (BLBP) (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes2_c1568	startle response	other biological processes	P	"Fatty acid-binding protein, brain (Brain lipid-binding protein) (BLBP) (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes2_c1568	neurogenesis	developmental processes	P	"Fatty acid-binding protein, brain (Brain lipid-binding protein) (BLBP) (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes2_c1568	cell proliferation in forebrain	cell cycle and proliferation	P	"Fatty acid-binding protein, brain (Brain lipid-binding protein) (BLBP) (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes2_c1568	cell proliferation in forebrain	developmental processes	P	"Fatty acid-binding protein, brain (Brain lipid-binding protein) (BLBP) (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes2_c1568	transport	transport	P	"Fatty acid-binding protein, brain (Brain lipid-binding protein) (BLBP) (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes_c16883	glycerol ether metabolic process	other metabolic processes	P	Protein disulfide-isomerase (PDI) (EC 5.3.4.1)
ruditapes_c16883	cell redox homeostasis	other biological processes	P	Protein disulfide-isomerase (PDI) (EC 5.3.4.1)
ruditapes_c19052	sperm motility	other biological processes	P	Phospholipid transfer protein (Lipid transfer protein II)
ruditapes_c19052	vitamin E biosynthetic process	other metabolic processes	P	Phospholipid transfer protein (Lipid transfer protein II)
ruditapes_c19052	lipid transport	transport	P	Phospholipid transfer protein (Lipid transfer protein II)
ruditapes_c19052	transport	transport	P	Phospholipid transfer protein (Lipid transfer protein II)
ruditapes_c15714	cell adhesion	cell adhesion	P	Neurocan core protein (245 kDa early postnatal core glycoprotein) (Chondroitin sulfate proteoglycan 3) [Cleaved into: 150 kDa adult core glycoprotein]
ruditapes_lrc38343	oxidation reduction	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12) (Fragment)
ruditapes_lrc38343	glycolysis	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12) (Fragment)
ruditapes_c26317	proteolysis	protein metabolism	P	Zinc metalloproteinase MspA (EC 3.4.24.-)
ruditapes_s37698	proteolysis	protein metabolism	P	Zinc metalloproteinase nas-4 (EC 3.4.24.21) (Nematode astacin 4)
ruditapes_s39776	proteolysis	protein metabolism	P	Zinc metalloproteinase nas-4 (EC 3.4.24.21) (Nematode astacin 4)
ruditapes_c13279	cytolysis	death	P	Leukotoxin secretion protein D
ruditapes_c13279	transmembrane transport	transport	P	Leukotoxin secretion protein D
ruditapes_c13279	protein secretion	transport	P	Leukotoxin secretion protein D
ruditapes_c13279	protein transport	transport	P	Leukotoxin secretion protein D
ruditapes_c13279	transport	transport	P	Leukotoxin secretion protein D
ruditapes_lrc35933	metabolic process	other metabolic processes	P	GTP pyrophosphokinase (EC 2.7.6.5) ((p)ppGpp synthase) (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthase I)
ruditapes_lrc35933	guanosine tetraphosphate metabolic process	other metabolic processes	P	GTP pyrophosphokinase (EC 2.7.6.5) ((p)ppGpp synthase) (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthase I)
ruditapes_lrc33160	metabolic process	other metabolic processes	P	GTP pyrophosphokinase (EC 2.7.6.5) ((p)ppGpp synthase) (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthase I)
ruditapes_lrc33160	guanosine tetraphosphate metabolic process	other metabolic processes	P	GTP pyrophosphokinase (EC 2.7.6.5) ((p)ppGpp synthase) (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthase I)
ruditapes_lrc33160	phosphorylation	other metabolic processes	P	GTP pyrophosphokinase (EC 2.7.6.5) ((p)ppGpp synthase) (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthase I)
ruditapes_lrc35933	phosphorylation	other metabolic processes	P	GTP pyrophosphokinase (EC 2.7.6.5) ((p)ppGpp synthase) (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthase I)
ruditapes_c24815	carbohydrate metabolic process	other metabolic processes	P	Uncharacterized sugar kinase YgcE (EC 2.7.1.-)
ruditapes_c24815	phosphorylation	other metabolic processes	P	Uncharacterized sugar kinase YgcE (EC 2.7.1.-)
ruditapes_c24815	glycerol-3-phosphate metabolic process	other metabolic processes	P	Uncharacterized sugar kinase YgcE (EC 2.7.1.-)
ruditapes2_c2412	electron transport chain	other metabolic processes	P	Glutaredoxin
ruditapes2_c2412	cell redox homeostasis	other biological processes	P	Glutaredoxin
ruditapes2_c2412	transport	transport	P	Glutaredoxin
ruditapes2_c1590	cell junction assembly	cell organization and biogenesis	P	Afadin (ALL1-fused gene from chromosome 6 protein) (Protein AF-6)
ruditapes2_c1590	cell-cell junction organization	cell organization and biogenesis	P	Afadin (ALL1-fused gene from chromosome 6 protein) (Protein AF-6)
ruditapes2_c1590	cell adhesion	cell adhesion	P	Afadin (ALL1-fused gene from chromosome 6 protein) (Protein AF-6)
ruditapes2_c1590	cell-cell signaling	cell-cell signaling	P	Afadin (ALL1-fused gene from chromosome 6 protein) (Protein AF-6)
ruditapes2_c1590	signal transduction	signal transduction	P	Afadin (ALL1-fused gene from chromosome 6 protein) (Protein AF-6)
ruditapes2_c1590	adherens junction organization	cell organization and biogenesis	P	Afadin (ALL1-fused gene from chromosome 6 protein) (Protein AF-6)
ruditapes_c8474	response to UV	other biological processes	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	protein processing	protein metabolism	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	heart development	developmental processes	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	proteolysis	protein metabolism	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	induction of apoptosis	death	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	cell structure disassembly during apoptosis	cell organization and biogenesis	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	cell structure disassembly during apoptosis	death	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	induction of apoptosis by intracellular signals	death	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	apoptosis	death	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	aging	other biological processes	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	release of cytochrome c from mitochondria	cell organization and biogenesis	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	release of cytochrome c from mitochondria	death	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	activation of caspase activity by cytochrome c	death	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_c8474	positive regulation of neuron apoptosis	death	P	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (CMH-1) (ICE-like apoptotic protease 3) (ICE-LAP3) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]
ruditapes_lrc19191	glycogen biosynthetic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Shrunken-2)"
ruditapes2_c6871	metabolic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Shrunken-2)"
ruditapes2_c6871	starch biosynthetic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Shrunken-2)"
ruditapes_lrc19191	biosynthetic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Shrunken-2)"
ruditapes_lrc19191	starch biosynthetic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Shrunken-2)"
ruditapes2_c6871	biosynthetic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Shrunken-2)"
ruditapes_lrc19191	metabolic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Shrunken-2)"
ruditapes2_c6871	glycogen biosynthetic process	other metabolic processes	P	"Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Shrunken-2)"
ruditapes_lrc39855	neuropeptide signaling pathway	signal transduction	P	Gonad-inhibiting hormone (GIH) (Vitellogenesis-inhibiting hormone) (VIH)
ruditapes_c19594	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	signal transduction	signal transduction	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	developmental cell growth	other biological processes	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	induction of apoptosis	death	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	peptidyl-arginine N-methylation	protein metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	protein amino acid methylation	protein metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	histone methylation	protein metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	histone methylation	cell organization and biogenesis	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	histone arginine methylation	cell organization and biogenesis	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	methylation	other metabolic processes	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c19594	histone arginine methylation	protein metabolism	P	Protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Histone-arginine N-methyltransferase PRMT2) (EC 2.1.1.125)
ruditapes_c2002	biosynthetic process	other metabolic processes	P	Uncharacterized protein y4aD
ruditapes_c2002	isoprenoid biosynthetic process	other metabolic processes	P	Uncharacterized protein y4aD
ruditapes_c29239	oxidation reduction	other metabolic processes	P	Uncharacterized protein y4iK
ruditapes_c10564	transport	transport	P	Uncharacterized protein y4iM
ruditapes_c10564	electron transport chain	other metabolic processes	P	Uncharacterized protein y4iM
ruditapes_c11602	metabolic process	other metabolic processes	P	Uncharacterized protein y4mH
ruditapes_c18531	cellular metabolic process	other metabolic processes	P	Uncharacterized protein y4nL
ruditapes_c6082	cellular process	other biological processes	P	Uncharacterized hydrolase/peptidase y4tL (EC 3.-.-.-)
ruditapes_c19342	transport	transport	P	Uncharacterized protein y4wM
ruditapes_c20987	nitrogen fixation	other metabolic processes	P	UPF0460 protein y4xD
ruditapes_s35216	nodulation	other biological processes	P	HTH-type transcriptional regulator SyrM 2 (Symbiotic regulator homolog 2)
ruditapes_s35216	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator SyrM 2 (Symbiotic regulator homolog 2)
ruditapes_s35216	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator SyrM 2 (Symbiotic regulator homolog 2)
ruditapes_s40403	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_s40403	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_s40403	transport	transport	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_s40403	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes2_c2303	proteolysis	protein metabolism	P	Puromycin-sensitive aminopeptidase (PSA) (EC 3.4.11.14) (Cytosol alanyl aminopeptidase) (AAP-S)
ruditapes2_c2303	protein polyubiquitination	protein metabolism	P	Puromycin-sensitive aminopeptidase (PSA) (EC 3.4.11.14) (Cytosol alanyl aminopeptidase) (AAP-S)
ruditapes2_c2303	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Puromycin-sensitive aminopeptidase (PSA) (EC 3.4.11.14) (Cytosol alanyl aminopeptidase) (AAP-S)
ruditapes_c4622	negative regulation of catalytic activity	other biological processes	P	Ornithine decarboxylase antizyme 1 (ODC-Az)
ruditapes_lrc30934	oogenesis	other biological processes	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	cell differentiation	other biological processes	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	response to stimulus	other biological processes	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	visual perception	other biological processes	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	protein deubiquitination	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	negative regulation of proteolysis	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	proteolysis	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	mystery cell fate differentiation	developmental processes	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	multicellular organismal development	developmental processes	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	nuclear migration	other biological processes	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	compound eye development	developmental processes	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	ubiquitin-dependent protein catabolic process	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	embryonic development	developmental processes	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	endocytosis	transport	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	endocytosis	cell organization and biogenesis	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	germ cell migration	other biological processes	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes_lrc30934	cellularization	developmental processes	P	Probable ubiquitin carboxyl-terminal hydrolase FAF (EC 3.4.19.12) (Protein fat facets) (Ubiquitin thioesterase FAF) (Ubiquitin-specific-processing protease FAF) (Deubiquitinating enzyme FAF)
ruditapes2_c2632	protein sumoylation	protein metabolism	P	Small ubiquitin-related modifier 3 (SUMO-3) (SMT3 homolog 1) (SUMO-2) (Ubiquitin-like protein SMT3B) (Smt3B)
ruditapes_c24251	DNA replication initiation	DNA metabolism	P	DNA replication licensing factor mcm5-A (xMCM5-A) (EC 3.6.4.12) (CDC46 homolog A) (xCDC46-A) (CDC46p) (p92)
ruditapes_c24251	cell cycle	cell cycle and proliferation	P	DNA replication licensing factor mcm5-A (xMCM5-A) (EC 3.6.4.12) (CDC46 homolog A) (xCDC46-A) (CDC46p) (p92)
ruditapes_c24251	regulation of DNA replication initiation	DNA metabolism	P	DNA replication licensing factor mcm5-A (xMCM5-A) (EC 3.6.4.12) (CDC46 homolog A) (xCDC46-A) (CDC46p) (p92)
ruditapes_c24251	ATP catabolic process	other metabolic processes	P	DNA replication licensing factor mcm5-A (xMCM5-A) (EC 3.6.4.12) (CDC46 homolog A) (xCDC46-A) (CDC46p) (p92)
ruditapes_c24251	DNA replication	DNA metabolism	P	DNA replication licensing factor mcm5-A (xMCM5-A) (EC 3.6.4.12) (CDC46 homolog A) (xCDC46-A) (CDC46p) (p92)
ruditapes_c24251	DNA unwinding during replication	DNA metabolism	P	DNA replication licensing factor mcm5-A (xMCM5-A) (EC 3.6.4.12) (CDC46 homolog A) (xCDC46-A) (CDC46p) (p92)
ruditapes_c31485	transmembrane transport	transport	P	Cyclic nucleotide-gated cation channel
ruditapes_c31485	transport	transport	P	Cyclic nucleotide-gated cation channel
ruditapes_c31485	sensory perception of smell	other biological processes	P	Cyclic nucleotide-gated cation channel
ruditapes_c31485	response to stimulus	other biological processes	P	Cyclic nucleotide-gated cation channel
ruditapes_c31485	ion transport	transport	P	Cyclic nucleotide-gated cation channel
ruditapes2_c5869	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes2_c5869	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes_c2074	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes_c2074	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes2_c5869	translation	protein metabolism	P	40S ribosomal protein S9
ruditapes_c2074	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes_c2074	translation	protein metabolism	P	40S ribosomal protein S9
ruditapes_s37025	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes_s37025	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes_lrc35080	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes2_c3984	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes2_c3984	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes2_c5138	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes2_c5138	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes_c2074	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes_lrc35080	translation	protein metabolism	P	40S ribosomal protein S9
ruditapes2_c4286	translation	protein metabolism	P	40S ribosomal protein S9
ruditapes2_c3984	translation	protein metabolism	P	40S ribosomal protein S9
ruditapes_lrc36809	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes_lrc36809	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes_lrc35080	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes2_c5869	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes2_c5869	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes2_c6888	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes2_c6888	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes2_c4286	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes2_c4286	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes_s37025	translation	protein metabolism	P	40S ribosomal protein S9
ruditapes_lrc36809	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes_lrc36809	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes_lrc36809	translation	protein metabolism	P	40S ribosomal protein S9
ruditapes_s37025	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes_s37025	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes2_c3984	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes2_c3984	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes2_c4286	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes2_c4286	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes2_c5138	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes2_c5138	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes2_c5138	translation	protein metabolism	P	40S ribosomal protein S9
ruditapes2_c6888	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes2_c6888	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes2_c6888	translation	protein metabolism	P	40S ribosomal protein S9
ruditapes_lrc35080	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S9
ruditapes_lrc35080	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S9
ruditapes2_c2006	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase subunit beta (EC 1.17.4.1) (Ribonucleotide reductase small subunit)
ruditapes2_c2006	deoxyribonucleoside diphosphate metabolic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit beta (EC 1.17.4.1) (Ribonucleotide reductase small subunit)
ruditapes2_c2006	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit beta (EC 1.17.4.1) (Ribonucleotide reductase small subunit)
ruditapes_c28181	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c28181	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c28181	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc4444	proton transport	transport	P	"ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4444	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4444	transport	transport	P	"ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4444	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4444	ion transport	transport	P	"ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4444	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4444	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4444	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit f, mitochondrial"
ruditapes_c12950	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase sigma-54 factor
ruditapes_c12950	"transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase sigma-54 factor
ruditapes_c12950	transcription initiation	RNA metabolism	P	RNA polymerase sigma-54 factor
ruditapes_c12950	transcription initiation	cell organization and biogenesis	P	RNA polymerase sigma-54 factor
ruditapes_c18954	neurotransmitter catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c18954	neurotransmitter catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c18954	acetylcholine catabolic process in synaptic cleft	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c18954	acetylcholine catabolic process in synaptic cleft	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes2_c1593	oxidation reduction	other metabolic processes	P	FAD-linked sulfhydryl oxidase ALR (EC 1.8.3.2) (Augmenter of liver regeneration)
ruditapes_s37419	positive regulation of multicellular organism growth	other biological processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	"transcription, DNA-dependent"	RNA metabolism	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	regulation of axonogenesis	developmental processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	regulation of axonogenesis	cell organization and biogenesis	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	cerebral cortex radially oriented cell migration	developmental processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	neuron differentiation	developmental processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	astrocyte development	developmental processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	myelination in the peripheral nervous system	developmental processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	hypothalamus cell differentiation	developmental processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	epidermis development	developmental processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	positive regulation of cell proliferation	cell cycle and proliferation	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	Schwann cell development	developmental processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	regulation of cell differentiation	other biological processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	forebrain ventricular zone progenitor cell division	cell cycle and proliferation	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	forebrain ventricular zone progenitor cell division	developmental processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	neurohypophysis development	developmental processes	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_s37419	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	"POU domain, class 3, transcription factor 2 (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Brn-2) (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Octamer-binding protein 7) (Oct-7) (Octamer-binding transcription factor 7) (OTF-7)"
ruditapes_c28881	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes2_c1792	RNA metabolic process	RNA metabolism	P	Probable translation initiation factor eIF-2B subunit epsilon (eIF-2B GDP-GTP exchange factor subunit epsilon)
ruditapes2_c1792	biosynthetic process	other metabolic processes	P	Probable translation initiation factor eIF-2B subunit epsilon (eIF-2B GDP-GTP exchange factor subunit epsilon)
ruditapes2_c1792	translational initiation	protein metabolism	P	Probable translation initiation factor eIF-2B subunit epsilon (eIF-2B GDP-GTP exchange factor subunit epsilon)
ruditapes2_c1792	translation	protein metabolism	P	Probable translation initiation factor eIF-2B subunit epsilon (eIF-2B GDP-GTP exchange factor subunit epsilon)
ruditapes2_c807	post-Golgi vesicle-mediated transport	transport	P	AP-1 complex subunit sigma-2 (Adapter-related protein complex 1 sigma-1B subunit) (Adaptor protein complex AP-1 sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Sigma 1B subunit of AP-1 clathrin) (Sigma-adaptin 1B) (Sigma1B-adaptin)
ruditapes2_c807	regulation of defense response to virus by virus	stress response	P	AP-1 complex subunit sigma-2 (Adapter-related protein complex 1 sigma-1B subunit) (Adaptor protein complex AP-1 sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Sigma 1B subunit of AP-1 clathrin) (Sigma-adaptin 1B) (Sigma1B-adaptin)
ruditapes2_c807	membrane organization	cell organization and biogenesis	P	AP-1 complex subunit sigma-2 (Adapter-related protein complex 1 sigma-1B subunit) (Adaptor protein complex AP-1 sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Sigma 1B subunit of AP-1 clathrin) (Sigma-adaptin 1B) (Sigma1B-adaptin)
ruditapes2_c807	viral reproduction	other biological processes	P	AP-1 complex subunit sigma-2 (Adapter-related protein complex 1 sigma-1B subunit) (Adaptor protein complex AP-1 sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Sigma 1B subunit of AP-1 clathrin) (Sigma-adaptin 1B) (Sigma1B-adaptin)
ruditapes2_c807	endocytosis	transport	P	AP-1 complex subunit sigma-2 (Adapter-related protein complex 1 sigma-1B subunit) (Adaptor protein complex AP-1 sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Sigma 1B subunit of AP-1 clathrin) (Sigma-adaptin 1B) (Sigma1B-adaptin)
ruditapes2_c807	endocytosis	cell organization and biogenesis	P	AP-1 complex subunit sigma-2 (Adapter-related protein complex 1 sigma-1B subunit) (Adaptor protein complex AP-1 sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Sigma 1B subunit of AP-1 clathrin) (Sigma-adaptin 1B) (Sigma1B-adaptin)
ruditapes2_c807	intracellular protein transport	transport	P	AP-1 complex subunit sigma-2 (Adapter-related protein complex 1 sigma-1B subunit) (Adaptor protein complex AP-1 sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Sigma 1B subunit of AP-1 clathrin) (Sigma-adaptin 1B) (Sigma1B-adaptin)
ruditapes2_c807	vesicle-mediated transport	transport	P	AP-1 complex subunit sigma-2 (Adapter-related protein complex 1 sigma-1B subunit) (Adaptor protein complex AP-1 sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Sigma 1B subunit of AP-1 clathrin) (Sigma-adaptin 1B) (Sigma1B-adaptin)
ruditapes2_c807	protein transport	transport	P	AP-1 complex subunit sigma-2 (Adapter-related protein complex 1 sigma-1B subunit) (Adaptor protein complex AP-1 sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Sigma 1B subunit of AP-1 clathrin) (Sigma-adaptin 1B) (Sigma1B-adaptin)
ruditapes2_c807	transport	transport	P	AP-1 complex subunit sigma-2 (Adapter-related protein complex 1 sigma-1B subunit) (Adaptor protein complex AP-1 sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Sigma 1B subunit of AP-1 clathrin) (Sigma-adaptin 1B) (Sigma1B-adaptin)
ruditapes2_lrc4180	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s40381	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4180	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4180	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s40381	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s40381	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4180	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s40381	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc11298	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s40381	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s40381	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc11298	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc11298	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4180	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4180	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s40381	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc11298	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4180	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc11298	mitochondrial ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc11298	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s40381	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc11298	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc11298	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc11298	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s40381	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s40381	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc11298	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4180	respiratory electron transport chain	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s40381	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc11298	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4180	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4180	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4180	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_c15318	protein homotetramerization	cell organization and biogenesis	P	Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)
ruditapes_c15318	cytidine deamination	other metabolic processes	P	Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)
ruditapes_c15318	response to cycloheximide	other biological processes	P	Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)
ruditapes_c15318	negative regulation of cell growth	other biological processes	P	Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)
ruditapes_c15318	negative regulation of nucleotide metabolic process	other metabolic processes	P	Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)
ruditapes2_c73	cell adhesion	cell adhesion	P	Galectin-4 (Gal-4) (Antigen NY-CO-27) (L-36 lactose-binding protein) (L36LBP) (Lactose-binding lectin 4)
ruditapes_c5458	signal transduction	signal transduction	P	Muscarinic acetylcholine receptor M5
ruditapes_c5458	muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M5
ruditapes_c5458	transmission of nerve impulse	other biological processes	P	Muscarinic acetylcholine receptor M5
ruditapes_c5458	G-protein coupled receptor protein signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M5
ruditapes_c5458	dopamine transport	transport	P	Muscarinic acetylcholine receptor M5
ruditapes_c16839	biological_process	other biological processes	P	"ES1 protein homolog, mitochondrial"
ruditapes_c10493	spermatid differentiation	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c25759	spermatid development	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c10493	spermatogenesis	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_lrc29262	spermatogenesis	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_lrc29262	nucleoside metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c10493	spermatid development	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c25759	spermatid differentiation	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_lrc29262	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c25759	spermatogenesis	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_lrc29262	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_lrc29262	spermatid development	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_lrc29262	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c10493	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_lrc29262	multicellular organismal development	developmental processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c25759	cell differentiation	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c10493	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_lrc29262	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c10493	anti-apoptosis	death	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c10493	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_lrc29262	anti-apoptosis	death	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c25759	nucleoside metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c10493	multicellular organismal development	developmental processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c10493	nucleoside metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c25759	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c10493	cell differentiation	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_lrc29262	spermatid differentiation	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c25759	anti-apoptosis	death	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_lrc29262	cell differentiation	other biological processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c25759	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c25759	multicellular organismal development	developmental processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c10493	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c25759	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c25759	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta) (Testis-specific nm23 homolog) (nm23-H5)
ruditapes_c4730	oxidation reduction	other metabolic processes	P	Cytochrome P450 2C39 (EC 1.14.14.1) (CYPIIC39)
ruditapes_c1952	oxidation reduction	other metabolic processes	P	Cytochrome P450 2C39 (EC 1.14.14.1) (CYPIIC39)
ruditapes_lrc21901	regulation of transmembrane ion transport	transport	P	Probable voltage-dependent N-type calcium channel subunit alpha-1B (DOE-4) (Voltage-gated calcium channel subunit alpha Cav2.2)
ruditapes_lrc21901	transport	transport	P	Probable voltage-dependent N-type calcium channel subunit alpha-1B (DOE-4) (Voltage-gated calcium channel subunit alpha Cav2.2)
ruditapes_lrc21901	ion transport	transport	P	Probable voltage-dependent N-type calcium channel subunit alpha-1B (DOE-4) (Voltage-gated calcium channel subunit alpha Cav2.2)
ruditapes_lrc21901	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Probable voltage-dependent N-type calcium channel subunit alpha-1B (DOE-4) (Voltage-gated calcium channel subunit alpha Cav2.2)
ruditapes_lrc21901	calcium ion transport	transport	P	Probable voltage-dependent N-type calcium channel subunit alpha-1B (DOE-4) (Voltage-gated calcium channel subunit alpha Cav2.2)
ruditapes_lrc21901	transmembrane calcium ion transport	transport	P	Probable voltage-dependent N-type calcium channel subunit alpha-1B (DOE-4) (Voltage-gated calcium channel subunit alpha Cav2.2)
ruditapes_lrc21901	transmembrane transport	transport	P	Probable voltage-dependent N-type calcium channel subunit alpha-1B (DOE-4) (Voltage-gated calcium channel subunit alpha Cav2.2)
ruditapes_c24692	transmembrane transport	transport	P	Probable voltage-dependent R-type calcium channel subunit alpha-1E (DOE-1) (Voltage-gated calcium channel subunit alpha Cav2.3)
ruditapes_c24692	transmembrane calcium ion transport	transport	P	Probable voltage-dependent R-type calcium channel subunit alpha-1E (DOE-1) (Voltage-gated calcium channel subunit alpha Cav2.3)
ruditapes_c24692	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Probable voltage-dependent R-type calcium channel subunit alpha-1E (DOE-1) (Voltage-gated calcium channel subunit alpha Cav2.3)
ruditapes_c24692	ion transport	transport	P	Probable voltage-dependent R-type calcium channel subunit alpha-1E (DOE-1) (Voltage-gated calcium channel subunit alpha Cav2.3)
ruditapes_c24692	calcium ion transport	transport	P	Probable voltage-dependent R-type calcium channel subunit alpha-1E (DOE-1) (Voltage-gated calcium channel subunit alpha Cav2.3)
ruditapes_c24692	regulation of transmembrane ion transport	transport	P	Probable voltage-dependent R-type calcium channel subunit alpha-1E (DOE-1) (Voltage-gated calcium channel subunit alpha Cav2.3)
ruditapes_c24692	transport	transport	P	Probable voltage-dependent R-type calcium channel subunit alpha-1E (DOE-1) (Voltage-gated calcium channel subunit alpha Cav2.3)
ruditapes_c14905	regulation of protein catabolic process	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 2 (26S proteasome regulatory subunit RPN1) (26S proteasome regulatory subunit S2) (26S proteasome subunit p97) (Tumor necrosis factor type 1 receptor-associated protein 2)
ruditapes_c14905	regulation of catalytic activity	other biological processes	P	26S proteasome non-ATPase regulatory subunit 2 (26S proteasome regulatory subunit RPN1) (26S proteasome regulatory subunit S2) (26S proteasome subunit p97) (Tumor necrosis factor type 1 receptor-associated protein 2)
ruditapes_c10039	response to stimulus	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c22008	retinal rod cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c10039	photoreceptor cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c10039	axoneme assembly	cell organization and biogenesis	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c22008	cell projection organization	cell organization and biogenesis	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c10039	visual perception	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c10039	photoreceptor cell maintenance	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c10039	retina morphogenesis in camera-type eye	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c22008	retina development in camera-type eye	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c22008	response to stimulus	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c22008	axoneme assembly	cell organization and biogenesis	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c10039	retinal cone cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c10039	cell projection organization	cell organization and biogenesis	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c10039	retinal rod cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c22008	retinal cone cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c22008	photoreceptor cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c10039	retina development in camera-type eye	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c22008	retina morphogenesis in camera-type eye	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c22008	photoreceptor cell maintenance	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c22008	visual perception	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c11125	translation	protein metabolism	P	"30S ribosomal protein S16, chloroplastic"
ruditapes_c30145	"regulation of transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 15 (PR domain-containing protein 15) (Zinc finger protein 298)
ruditapes_c30145	"transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 15 (PR domain-containing protein 15) (Zinc finger protein 298)
ruditapes_c30660	negative regulation of T cell receptor signaling pathway	signal transduction	P	Ubiquitin-associated and SH3 domain-containing protein A (Cbl-interacting protein 4) (CLIP4) (Suppressor of T-cell receptor signaling 2) (STS-2) (T-cell ubiquitin ligand 1) (TULA-1)
ruditapes_c30660	regulation of cytokine production	other biological processes	P	Ubiquitin-associated and SH3 domain-containing protein A (Cbl-interacting protein 4) (CLIP4) (Suppressor of T-cell receptor signaling 2) (STS-2) (T-cell ubiquitin ligand 1) (TULA-1)
ruditapes_c18526	DNA replication	DNA metabolism	P	DNA replication protein DnaC
ruditapes_c18526	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	DNA replication protein DnaC
ruditapes_c18526	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	DNA replication protein DnaC
ruditapes_c24547	cell division	other biological processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c24547	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c24547	cell cycle	cell cycle and proliferation	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c24547	oxidation reduction	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c24547	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c24547	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c6318	translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c6318	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c6318	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c6318	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c6318	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c6318	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c24831	chemotaxis	other biological processes	P	Flagellar motor switch protein FliM
ruditapes_c24831	ciliary or flagellar motility	other biological processes	P	Flagellar motor switch protein FliM
ruditapes_c17043	proteolysis	protein metabolism	P	Methionine aminopeptidase (MAP) (EC 3.4.11.18) (Peptidase M)
ruditapes_c17043	cellular process	other biological processes	P	Methionine aminopeptidase (MAP) (EC 3.4.11.18) (Peptidase M)
ruditapes_c12650	transport	transport	P	Glycerol uptake facilitator protein
ruditapes_c12650	glycerol metabolic process	other metabolic processes	P	Glycerol uptake facilitator protein
ruditapes_s40338	ion transport	transport	P	Porin-like protein BU359
ruditapes_s40338	transport	transport	P	Porin-like protein BU359
ruditapes_lrc25598	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_lrc25598	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_lrc25598	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c25380	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c25380	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c16857	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c16857	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c16857	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c16857	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c16857	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c9401	phosphorylation	other metabolic processes	P	Adenylyl-sulfate kinase (EC 2.7.1.25) (APS kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) (Adenosine-5'-phosphosulfate kinase)
ruditapes_c9401	sulfate assimilation	other metabolic processes	P	Adenylyl-sulfate kinase (EC 2.7.1.25) (APS kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) (Adenosine-5'-phosphosulfate kinase)
ruditapes2_c1100	cellular sodium ion homeostasis	other biological processes	P	Transmembrane protease serine 3 (EC 3.4.21.-) (Serine protease TADG-12) (Tumor-associated differentially-expressed gene 12 protein)
ruditapes2_c541	proteolysis	protein metabolism	P	Transmembrane protease serine 3 (EC 3.4.21.-) (Serine protease TADG-12) (Tumor-associated differentially-expressed gene 12 protein)
ruditapes2_c541	sensory perception of sound	other biological processes	P	Transmembrane protease serine 3 (EC 3.4.21.-) (Serine protease TADG-12) (Tumor-associated differentially-expressed gene 12 protein)
ruditapes2_c541	cellular sodium ion homeostasis	other biological processes	P	Transmembrane protease serine 3 (EC 3.4.21.-) (Serine protease TADG-12) (Tumor-associated differentially-expressed gene 12 protein)
ruditapes2_c1100	proteolysis	protein metabolism	P	Transmembrane protease serine 3 (EC 3.4.21.-) (Serine protease TADG-12) (Tumor-associated differentially-expressed gene 12 protein)
ruditapes2_c1100	sensory perception of sound	other biological processes	P	Transmembrane protease serine 3 (EC 3.4.21.-) (Serine protease TADG-12) (Tumor-associated differentially-expressed gene 12 protein)
ruditapes_c23071	early endosome to late endosome transport	transport	P	Sorting nexin-16
ruditapes_c23071	protein transport	transport	P	Sorting nexin-16
ruditapes_c23071	transport	transport	P	Sorting nexin-16
ruditapes_c23071	protein targeting to lysosome	transport	P	Sorting nexin-16
ruditapes_c23071	endosome to lysosome transport	transport	P	Sorting nexin-16
ruditapes_c23071	cell communication	other biological processes	P	Sorting nexin-16
ruditapes2_c431	transmembrane transport	transport	P	Monocarboxylate transporter 4 (MCT 4) (Solute carrier family 16 member 3)
ruditapes2_c431	organic anion transport	transport	P	Monocarboxylate transporter 4 (MCT 4) (Solute carrier family 16 member 3)
ruditapes2_c431	transport	transport	P	Monocarboxylate transporter 4 (MCT 4) (Solute carrier family 16 member 3)
ruditapes_c19341	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3)
ruditapes_c19341	"transcription, DNA-dependent"	RNA metabolism	P	Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3)
ruditapes_c19341	intracellular receptor-mediated signaling pathway	signal transduction	P	Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3)
ruditapes_c19341	steroid hormone mediated signaling	signal transduction	P	Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3)
ruditapes_lrc27465	metabolic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_lrc27465	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_lrc39273	one-carbon compound metabolic process	other metabolic processes	P	GTP cyclohydrolase 1 (EC 3.5.4.16) (GTP cyclohydrolase I) (GTP-CH-I)
ruditapes_lrc39273	tetrahydrofolate biosynthetic process	other metabolic processes	P	GTP cyclohydrolase 1 (EC 3.5.4.16) (GTP cyclohydrolase I) (GTP-CH-I)
ruditapes_c18353	cell cycle arrest	cell cycle and proliferation	P	Sestrin-3
ruditapes_c30475	glutamine metabolic process	other metabolic processes	P	Uncharacterized protein MJ1351.1
ruditapes_c30475	metabolic process	other metabolic processes	P	Uncharacterized protein MJ1351.1
ruditapes_s32921	histidine metabolic process	other metabolic processes	P	Imidazolonepropionase (EC 3.5.2.7) (Imidazolone-5-propionate hydrolase)
ruditapes_s32921	histidine catabolic process to glutamate and formamide	other metabolic processes	P	Imidazolonepropionase (EC 3.5.2.7) (Imidazolone-5-propionate hydrolase)
ruditapes_c7245	biological_process	other biological processes	P	Epiplakin (450 kDa epidermal antigen)
ruditapes_c17452	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 2B6 (Hs6M1-32) (Olfactory receptor 2B1) (Olfactory receptor 2B5) (Olfactory receptor 5-40) (OR5-40) (Olfactory receptor 6-31) (OR6-31) (Olfactory receptor OR6-4)
ruditapes_c17452	signal transduction	signal transduction	P	Olfactory receptor 2B6 (Hs6M1-32) (Olfactory receptor 2B1) (Olfactory receptor 2B5) (Olfactory receptor 5-40) (OR5-40) (Olfactory receptor 6-31) (OR6-31) (Olfactory receptor OR6-4)
ruditapes_c17452	response to stimulus	other biological processes	P	Olfactory receptor 2B6 (Hs6M1-32) (Olfactory receptor 2B1) (Olfactory receptor 2B5) (Olfactory receptor 5-40) (OR5-40) (Olfactory receptor 6-31) (OR6-31) (Olfactory receptor OR6-4)
ruditapes_c17452	sensory perception of smell	other biological processes	P	Olfactory receptor 2B6 (Hs6M1-32) (Olfactory receptor 2B1) (Olfactory receptor 2B5) (Olfactory receptor 5-40) (OR5-40) (Olfactory receptor 6-31) (OR6-31) (Olfactory receptor OR6-4)
ruditapes_c17452	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 2B6 (Hs6M1-32) (Olfactory receptor 2B1) (Olfactory receptor 2B5) (Olfactory receptor 5-40) (OR5-40) (Olfactory receptor 6-31) (OR6-31) (Olfactory receptor OR6-4)
ruditapes2_c454	lipid biosynthetic process	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes2_c454	lipid A biosynthetic process	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes2_c454	phosphorylation	other metabolic processes	P	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase)
ruditapes_c26789	cartilage development	developmental processes	P	Leukocyte cell-derived chemotaxin 1 [Cleaved into: Chondrosurfactant protein (CH-SP); Chondromodulin-1 (Chondromodulin-I) (ChM-I)]
ruditapes_c26789	cell differentiation	other biological processes	P	Leukocyte cell-derived chemotaxin 1 [Cleaved into: Chondrosurfactant protein (CH-SP); Chondromodulin-1 (Chondromodulin-I) (ChM-I)]
ruditapes_c26789	multicellular organismal development	developmental processes	P	Leukocyte cell-derived chemotaxin 1 [Cleaved into: Chondrosurfactant protein (CH-SP); Chondromodulin-1 (Chondromodulin-I) (ChM-I)]
ruditapes_c8486	chromatin modification	cell organization and biogenesis	P	Zinc finger protein DPF3 (BRG1-associated factor 45C) (BAF45C) (Zinc finger protein cer-d4)
ruditapes_c8486	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein DPF3 (BRG1-associated factor 45C) (BAF45C) (Zinc finger protein cer-d4)
ruditapes_c8486	nervous system development	developmental processes	P	Zinc finger protein DPF3 (BRG1-associated factor 45C) (BAF45C) (Zinc finger protein cer-d4)
ruditapes_c8486	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein DPF3 (BRG1-associated factor 45C) (BAF45C) (Zinc finger protein cer-d4)
ruditapes_c7971	photosynthesis	other metabolic processes	P	Archaeal Lon protease (EC 3.4.21.-) (ATP-dependent protease La homolog type 1)
ruditapes_c7971	chlorophyll biosynthetic process	other metabolic processes	P	Archaeal Lon protease (EC 3.4.21.-) (ATP-dependent protease La homolog type 1)
ruditapes_c7971	protein catabolic process	protein metabolism	P	Archaeal Lon protease (EC 3.4.21.-) (ATP-dependent protease La homolog type 1)
ruditapes_c7971	proteolysis	protein metabolism	P	Archaeal Lon protease (EC 3.4.21.-) (ATP-dependent protease La homolog type 1)
ruditapes_c7971	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Archaeal Lon protease (EC 3.4.21.-) (ATP-dependent protease La homolog type 1)
ruditapes_c30282	ATP biosynthetic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit alpha-3 (Na(+)/K(+) ATPase alpha-3 subunit) (EC 3.6.3.9) (Na(+)/K(+) ATPase alpha(III) subunit) (Sodium pump subunit alpha-3)
ruditapes_c30282	potassium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-3 (Na(+)/K(+) ATPase alpha-3 subunit) (EC 3.6.3.9) (Na(+)/K(+) ATPase alpha(III) subunit) (Sodium pump subunit alpha-3)
ruditapes_c30282	metabolic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit alpha-3 (Na(+)/K(+) ATPase alpha-3 subunit) (EC 3.6.3.9) (Na(+)/K(+) ATPase alpha(III) subunit) (Sodium pump subunit alpha-3)
ruditapes_c30282	cation transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-3 (Na(+)/K(+) ATPase alpha-3 subunit) (EC 3.6.3.9) (Na(+)/K(+) ATPase alpha(III) subunit) (Sodium pump subunit alpha-3)
ruditapes_c30282	transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-3 (Na(+)/K(+) ATPase alpha-3 subunit) (EC 3.6.3.9) (Na(+)/K(+) ATPase alpha(III) subunit) (Sodium pump subunit alpha-3)
ruditapes_c30282	ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-3 (Na(+)/K(+) ATPase alpha-3 subunit) (EC 3.6.3.9) (Na(+)/K(+) ATPase alpha(III) subunit) (Sodium pump subunit alpha-3)
ruditapes_c30282	sodium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-3 (Na(+)/K(+) ATPase alpha-3 subunit) (EC 3.6.3.9) (Na(+)/K(+) ATPase alpha(III) subunit) (Sodium pump subunit alpha-3)
ruditapes_c30282	monovalent inorganic cation transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-3 (Na(+)/K(+) ATPase alpha-3 subunit) (EC 3.6.3.9) (Na(+)/K(+) ATPase alpha(III) subunit) (Sodium pump subunit alpha-3)
ruditapes_c14250	transport	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c23155	transport	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c14250	copper ion export	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c23155	copper ion export	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c14250	ATP biosynthetic process	other metabolic processes	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c14250	metabolic process	other metabolic processes	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c23155	metal ion transport	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c23155	metabolic process	other metabolic processes	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c23155	ATP biosynthetic process	other metabolic processes	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c14250	copper ion transport	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c23155	copper ion transport	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c14250	metal ion transport	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c23155	cation transport	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c23155	ATP metabolic process	other metabolic processes	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c14250	ATP metabolic process	other metabolic processes	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c14250	cation transport	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c23155	ion transport	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c14250	ion transport	transport	P	Copper-transporting ATPase 1 (EC 3.6.3.4)
ruditapes_c10622	transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 3 (Glucose transporter type 3, brain) (GLUT-3)"
ruditapes_c10622	transmembrane transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 3 (Glucose transporter type 3, brain) (GLUT-3)"
ruditapes_c10622	glucose transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 3 (Glucose transporter type 3, brain) (GLUT-3)"
ruditapes_c10622	carbohydrate transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 3 (Glucose transporter type 3, brain) (GLUT-3)"
ruditapes2_c4916	translation	protein metabolism	P	60S ribosomal protein L30
ruditapes2_c5219	translation	protein metabolism	P	60S ribosomal protein L30
ruditapes_lrc34197	translation	protein metabolism	P	60S ribosomal protein L30
ruditapes2_c4288	translation	protein metabolism	P	60S ribosomal protein L30
ruditapes_c17459	glycolysis	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase 3 (EC 1.2.1.12)
ruditapes_c17459	oxidation reduction	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase 3 (EC 1.2.1.12)
ruditapes_c17459	glucose metabolic process	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase 3 (EC 1.2.1.12)
ruditapes_c15931	oxidation reduction	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase 2 (GAPDH 2) (EC 1.2.1.59) (NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase 2)
ruditapes_c15931	glycolysis	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase 2 (GAPDH 2) (EC 1.2.1.59) (NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase 2)
ruditapes_lrc23558	methanogenesis	other metabolic processes	P	Monomethylamine methyltransferase MtmB1 (MMA methyltransferase 1) (MMAMT 1) (EC 2.1.1.248)
ruditapes_lrc23558	methylation	other metabolic processes	P	Monomethylamine methyltransferase MtmB1 (MMA methyltransferase 1) (MMAMT 1) (EC 2.1.1.248)
ruditapes_c29101	"transcription, DNA-dependent"	RNA metabolism	P	Glucocorticoid modulatory element-binding protein 2 (GMEB-2)
ruditapes_c29101	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Glucocorticoid modulatory element-binding protein 2 (GMEB-2)
ruditapes_c29101	biological_process	other biological processes	P	Glucocorticoid modulatory element-binding protein 2 (GMEB-2)
ruditapes_c21067	DNA repair	stress response	P	DNA polymerase IV (Pol IV) (EC 2.7.7.7)
ruditapes_c21067	DNA repair	DNA metabolism	P	DNA polymerase IV (Pol IV) (EC 2.7.7.7)
ruditapes_c21067	DNA replication	DNA metabolism	P	DNA polymerase IV (Pol IV) (EC 2.7.7.7)
ruditapes_c21067	response to DNA damage stimulus	stress response	P	DNA polymerase IV (Pol IV) (EC 2.7.7.7)
ruditapes_c1849	cellular amino acid biosynthetic process	other metabolic processes	P	Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c1849	branched chain family amino acid biosynthetic process	other metabolic processes	P	Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_lrc38043	branched chain family amino acid biosynthetic process	other metabolic processes	P	Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_lrc38043	carboxylic acid metabolic process	other metabolic processes	P	Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c1849	leucine biosynthetic process	other metabolic processes	P	Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_lrc38043	leucine biosynthetic process	other metabolic processes	P	Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_lrc38043	cellular amino acid biosynthetic process	other metabolic processes	P	Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c1849	carboxylic acid metabolic process	other metabolic processes	P	Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c22189	intracellular protein transport	transport	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c22189	optokinetic behavior	other biological processes	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c22189	endosome to lysosome transport	transport	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c22189	multicellular organismal development	developmental processes	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c22189	pigment granule maturation	other biological processes	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c22189	transport	transport	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c22189	apical protein localization	other biological processes	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c22189	protein transport	transport	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c22189	eye pigmentation	other biological processes	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c22189	endosome to pigment granule transport	transport	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c22189	vesicle-mediated transport	transport	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c22189	bile acid and bile salt transport	transport	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c19338	translation	protein metabolism	P	30S ribosomal protein S8
ruditapes_c12743	oxidation reduction	other metabolic processes	P	"NACHT, LRR and PYD domains-containing protein 11 (Nucleotide-binding oligomerization domain protein 17) (PAAD-and NACHT domain-containing protein 10) (PYRIN-containing APAF1-like protein 6)"
ruditapes_c22287	keratinocyte proliferation	cell cycle and proliferation	P	Fermitin family homolog 1 (Kindlin-1) (Unc-112-related protein 1)
ruditapes_c22287	keratinocyte migration	other biological processes	P	Fermitin family homolog 1 (Kindlin-1) (Unc-112-related protein 1)
ruditapes_c22287	cell adhesion	cell adhesion	P	Fermitin family homolog 1 (Kindlin-1) (Unc-112-related protein 1)
ruditapes_s33494	oxidation reduction	other metabolic processes	P	Peroxidase 58 (Atperox P58) (EC 1.11.1.7) (ATP42)
ruditapes_s33494	response to oxidative stress	stress response	P	Peroxidase 58 (Atperox P58) (EC 1.11.1.7) (ATP42)
ruditapes_s33494	hydrogen peroxide catabolic process	stress response	P	Peroxidase 58 (Atperox P58) (EC 1.11.1.7) (ATP42)
ruditapes_s33494	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidase 58 (Atperox P58) (EC 1.11.1.7) (ATP42)
ruditapes_c30991	transmembrane transport	transport	P	UPF0226 protein YhhS
ruditapes_c15051	biological_process	other biological processes	P	Kelch-like protein 8
ruditapes_c15908	arginine biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c15908	phosphorylation	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c15908	cellular amino acid biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c6192	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_c9195	L-serine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c9195	one-carbon compound metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c9195	glycine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c9195	cellular amino acid biosynthetic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c24927	pigmentation	other biological processes	P	Hermansky-Pudlak syndrome 5 protein homolog (Ruby-eye protein 2) (Ru2)
ruditapes_c21745	pigmentation	other biological processes	P	Hermansky-Pudlak syndrome 5 protein homolog (Ruby-eye protein 2) (Ru2)
ruditapes_c24927	blood coagulation	stress response	P	Hermansky-Pudlak syndrome 5 protein homolog (Ruby-eye protein 2) (Ru2)
ruditapes_c21745	blood coagulation	stress response	P	Hermansky-Pudlak syndrome 5 protein homolog (Ruby-eye protein 2) (Ru2)
ruditapes_c21745	organelle organization	cell organization and biogenesis	P	Hermansky-Pudlak syndrome 5 protein homolog (Ruby-eye protein 2) (Ru2)
ruditapes_c24927	organelle organization	cell organization and biogenesis	P	Hermansky-Pudlak syndrome 5 protein homolog (Ruby-eye protein 2) (Ru2)
ruditapes_c11600	N-acetylmannosamine metabolic process	other metabolic processes	P	Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) (ManNAc-6-P epimerase)
ruditapes_c11600	metabolic process	other metabolic processes	P	Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) (ManNAc-6-P epimerase)
ruditapes_c11600	carbohydrate metabolic process	other metabolic processes	P	Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) (ManNAc-6-P epimerase)
ruditapes_c23802	RNA processing	RNA metabolism	P	Ribonuclease T (EC 3.1.13.-) (Exoribonuclease T) (RNase T)
ruditapes_c23802	tRNA processing	RNA metabolism	P	Ribonuclease T (EC 3.1.13.-) (Exoribonuclease T) (RNase T)
ruditapes_c31678	tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c31678	translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c31678	tRNA aminoacylation for protein translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c31678	tRNA aminoacylation for protein translation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c31678	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c31678	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c1476	tRNA processing	RNA metabolism	P	tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase)
ruditapes_s36200	response to stimulus	other biological processes	P	Taste receptor type 2 member 123 (T2R123) (STC9-2) (Taste receptor type 2 member 23) (T2R23) (mT2R55)
ruditapes_s36200	signal transduction	signal transduction	P	Taste receptor type 2 member 123 (T2R123) (STC9-2) (Taste receptor type 2 member 23) (T2R23) (mT2R55)
ruditapes_s36200	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 2 member 123 (T2R123) (STC9-2) (Taste receptor type 2 member 23) (T2R23) (mT2R55)
ruditapes_s36200	sensory perception of taste	other biological processes	P	Taste receptor type 2 member 123 (T2R123) (STC9-2) (Taste receptor type 2 member 23) (T2R23) (mT2R55)
ruditapes_s36200	detection of chemical stimulus involved in sensory perception of bitter taste	other biological processes	P	Taste receptor type 2 member 123 (T2R123) (STC9-2) (Taste receptor type 2 member 23) (T2R23) (mT2R55)
ruditapes_c15143	transport	transport	P	Lactose permease (Lactose-proton symport) (Fragment)
ruditapes_c15143	carbohydrate transport	transport	P	Lactose permease (Lactose-proton symport) (Fragment)
ruditapes_s38364	rRNA processing	RNA metabolism	P	Ribosomal large subunit pseudouridine synthase D (EC 5.4.99.23) (23S rRNA pseudouridine(1911/1915/1917) synthase) (rRNA pseudouridylate synthase D) (rRNA-uridine isomerase D)
ruditapes_s38364	RNA modification	RNA metabolism	P	Ribosomal large subunit pseudouridine synthase D (EC 5.4.99.23) (23S rRNA pseudouridine(1911/1915/1917) synthase) (rRNA pseudouridylate synthase D) (rRNA-uridine isomerase D)
ruditapes_s38364	pseudouridine synthesis	RNA metabolism	P	Ribosomal large subunit pseudouridine synthase D (EC 5.4.99.23) (23S rRNA pseudouridine(1911/1915/1917) synthase) (rRNA pseudouridylate synthase D) (rRNA-uridine isomerase D)
ruditapes_c14064	biological_process	other biological processes	P	EMILIN-3 (EMILIN-5) (Elastin microfibril interface located protein 5) (Elastin microfibril interfacer 5) (Elastin microfibril interface-located protein 3) (Elastin microfibril interfacer 3)
ruditapes_c16447	actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 4 (Arp2/3 complex 20 kDa subunit) (p20-ARC)
ruditapes_c16447	biological_process	other biological processes	P	Actin-related protein 2/3 complex subunit 4 (Arp2/3 complex 20 kDa subunit) (p20-ARC)
ruditapes_lrc33177	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc33177	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc33177	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc33177	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc2960	oxidation reduction	other metabolic processes	P	Chlorate reductase subunit alpha (EC 1.97.1.1) (Chlorate reductase molybdenum subunit)
ruditapes_c14106	methanogenesis	other metabolic processes	P	CoB--CoM heterodisulfide reductase iron-sulfur subunit A (EC 1.8.98.1)
ruditapes_c14106	oxidation reduction	other metabolic processes	P	CoB--CoM heterodisulfide reductase iron-sulfur subunit A (EC 1.8.98.1)
ruditapes_c23851	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_lrc37625	mRNA catabolic process	RNA metabolism	P	Nanos homolog 2 (NOS-2)
ruditapes_lrc37625	multicellular organismal development	developmental processes	P	Nanos homolog 2 (NOS-2)
ruditapes_lrc37625	germ-line stem cell maintenance	other biological processes	P	Nanos homolog 2 (NOS-2)
ruditapes_lrc37625	spermatogenesis	other biological processes	P	Nanos homolog 2 (NOS-2)
ruditapes_lrc37625	negative regulation of meiosis	cell cycle and proliferation	P	Nanos homolog 2 (NOS-2)
ruditapes_lrc37625	regulation of translation	protein metabolism	P	Nanos homolog 2 (NOS-2)
ruditapes_lrc37625	cell differentiation	other biological processes	P	Nanos homolog 2 (NOS-2)
ruditapes_c30082	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c30082	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c30082	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c7131	apoptosis	death	P	Gamma-aminobutyric acid receptor-associated protein (GABA(A) receptor-associated protein)
ruditapes_c7131	transport	transport	P	Gamma-aminobutyric acid receptor-associated protein (GABA(A) receptor-associated protein)
ruditapes_lrc31877	transport	transport	P	Gamma-aminobutyric acid receptor-associated protein (GABA(A) receptor-associated protein)
ruditapes_c7131	protein transport	transport	P	Gamma-aminobutyric acid receptor-associated protein (GABA(A) receptor-associated protein)
ruditapes_lrc31877	protein transport	transport	P	Gamma-aminobutyric acid receptor-associated protein (GABA(A) receptor-associated protein)
ruditapes_lrc31877	apoptosis	death	P	Gamma-aminobutyric acid receptor-associated protein (GABA(A) receptor-associated protein)
ruditapes_c18039	transport	transport	P	Gamma-aminobutyric acid receptor-associated protein-like 2 (GABA(A) receptor-associated protein-like 2) (Ganglioside expression factor 2) (GEF-2) (Golgi-associated ATPase enhancer of 16 kDa) (GATE-16)
ruditapes_c18039	protein transport	transport	P	Gamma-aminobutyric acid receptor-associated protein-like 2 (GABA(A) receptor-associated protein-like 2) (Ganglioside expression factor 2) (GEF-2) (Golgi-associated ATPase enhancer of 16 kDa) (GATE-16)
ruditapes_c18039	biological_process	other biological processes	P	Gamma-aminobutyric acid receptor-associated protein-like 2 (GABA(A) receptor-associated protein-like 2) (Ganglioside expression factor 2) (GEF-2) (Golgi-associated ATPase enhancer of 16 kDa) (GATE-16)
ruditapes_c21563	translation	protein metabolism	P	50S ribosomal protein L24P
ruditapes_c21651	spinal cord motor neuron differentiation	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 2 (MAM domain-containing protein 1)
ruditapes_lrc32058	spinal cord motor neuron differentiation	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 2 (MAM domain-containing protein 1)
ruditapes_c29711	defense response	stress response	P	Probable disease resistance protein At1g12290
ruditapes_lrc39132	translation	protein metabolism	P	40S ribosomal protein S20
ruditapes_c7257	transcription from RNA polymerase II promoter	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB9 (RNA polymerase II subunit B9) (DNA-directed RNA polymerase II subunit I) (RNA polymerase II 14.5 kDa subunit) (RPB14.5)
ruditapes_c7257	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB9 (RNA polymerase II subunit B9) (DNA-directed RNA polymerase II subunit I) (RNA polymerase II 14.5 kDa subunit) (RPB14.5)
ruditapes_c7257	protein amino acid phosphorylation	protein metabolism	P	DNA-directed RNA polymerase II subunit RPB9 (RNA polymerase II subunit B9) (DNA-directed RNA polymerase II subunit I) (RNA polymerase II 14.5 kDa subunit) (RPB14.5)
ruditapes2_c2333	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-6 (EC 3.4.25.1) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (Proteasome iota chain)
ruditapes2_c2333	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-6 (EC 3.4.25.1) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (Proteasome iota chain)
ruditapes_c23415	proteolysis	protein metabolism	P	Proteasome subunit alpha type-6 (EC 3.4.25.1) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (Proteasome iota chain)
ruditapes_c23415	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Proteasome subunit alpha type-6 (EC 3.4.25.1) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (Proteasome iota chain)
ruditapes_c23415	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-6 (EC 3.4.25.1) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (Proteasome iota chain)
ruditapes_c23415	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-6 (EC 3.4.25.1) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (Proteasome iota chain)
ruditapes2_c2333	proteolysis	protein metabolism	P	Proteasome subunit alpha type-6 (EC 3.4.25.1) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (Proteasome iota chain)
ruditapes2_c2333	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Proteasome subunit alpha type-6 (EC 3.4.25.1) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (Proteasome iota chain)
ruditapes_c7065	nitrogen compound metabolic process	other metabolic processes	P	Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC 2.3.1.-)
ruditapes_c7065	lipoprotein biosynthetic process	other metabolic processes	P	Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC 2.3.1.-)
ruditapes_c8840	translation	protein metabolism	P	50S ribosomal protein L4
ruditapes_c17704	translation	protein metabolism	P	50S ribosomal protein L4
ruditapes_lrc34654	translation	protein metabolism	P	60S ribosomal protein L32 (Ribosomal protein 49)
ruditapes2_c158	biological_process	other biological processes	P	Transmembrane protein 258
ruditapes_c4515	protein transport	transport	P	ADP-ribosylation factor 1 (lARF1)
ruditapes_c4515	vesicle-mediated transport	transport	P	ADP-ribosylation factor 1 (lARF1)
ruditapes_c4018	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor 1 (lARF1)
ruditapes_c4515	transport	transport	P	ADP-ribosylation factor 1 (lARF1)
ruditapes_c4515	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor 1 (lARF1)
ruditapes_c4018	protein transport	transport	P	ADP-ribosylation factor 1 (lARF1)
ruditapes_c4018	vesicle-mediated transport	transport	P	ADP-ribosylation factor 1 (lARF1)
ruditapes_c4018	transport	transport	P	ADP-ribosylation factor 1 (lARF1)
ruditapes_c3870	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 1b (eIF1b) (Protein translation factor SUI1 homolog GC20)
ruditapes_c3870	translation	protein metabolism	P	Eukaryotic translation initiation factor 1b (eIF1b) (Protein translation factor SUI1 homolog GC20)
ruditapes_lrc32549	translation	protein metabolism	P	60S ribosomal protein L26 (Silica-induced gene 20 protein) (SIG-20)
ruditapes_c7097	bypass DNA synthesis	stress response	P	Proliferating cell nuclear antigen (PCNA)
ruditapes_c7097	bypass DNA synthesis	DNA metabolism	P	Proliferating cell nuclear antigen (PCNA)
ruditapes_c7097	positive regulation of deoxyribonuclease activity	other biological processes	P	Proliferating cell nuclear antigen (PCNA)
ruditapes_c7097	DNA replication	DNA metabolism	P	Proliferating cell nuclear antigen (PCNA)
ruditapes_c7097	regulation of DNA replication	DNA metabolism	P	Proliferating cell nuclear antigen (PCNA)
ruditapes_c8425	proteolysis	protein metabolism	P	Cathepsin K (EC 3.4.22.38)
ruditapes2_c1480	translation	protein metabolism	P	Ribosome-recycling factor (RRF) (Ribosome-releasing factor)
ruditapes_c527	translation	protein metabolism	P	60S ribosomal protein L15
ruditapes_c14	translation	protein metabolism	P	60S ribosomal protein L15
ruditapes_c26620	biosynthetic process	other metabolic processes	P	"Galactose-3-O-sulfotransferase 3 (Gal3ST-3) (EC 2.8.2.-) (Beta-galactose-3-O-sulfotransferase 3) (Gal-beta-1, 3-GalNAc 3'-sulfotransferase 3)"
ruditapes_c27310	phosphorylation	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_c27310	protein amino acid phosphorylation	protein metabolism	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_c27310	regulation of carbohydrate metabolic process	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_c27310	two-component signal transduction system (phosphorelay)	signal transduction	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes_c27310	metabolic process	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes2_lrc5397	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_lrc33941	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_lrc35003	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes2_lrc5565	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_lrc33766	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_s38651	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_lrc33978	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_lrc32536	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes2_lrc5930	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_lrc34369	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_lrc34881	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_lrc33982	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_c19983	oligosaccharide metabolic process	other metabolic processes	P	"CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase (EC 2.4.99.-) (Alpha-2,8-sialyltransferase 8D) (Polysialyltransferase-1) (Sialyltransferase 8D) (SIAT8-D) (Sialyltransferase St8Sia IV) (ST8SiaIV)"
ruditapes_c19983	N-glycan processing	protein metabolism	P	"CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase (EC 2.4.99.-) (Alpha-2,8-sialyltransferase 8D) (Polysialyltransferase-1) (Sialyltransferase 8D) (SIAT8-D) (Sialyltransferase St8Sia IV) (ST8SiaIV)"
ruditapes_c19983	ganglioside biosynthetic process	other metabolic processes	P	"CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase (EC 2.4.99.-) (Alpha-2,8-sialyltransferase 8D) (Polysialyltransferase-1) (Sialyltransferase 8D) (SIAT8-D) (Sialyltransferase St8Sia IV) (ST8SiaIV)"
ruditapes_c19983	protein amino acid glycosylation	protein metabolism	P	"CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase (EC 2.4.99.-) (Alpha-2,8-sialyltransferase 8D) (Polysialyltransferase-1) (Sialyltransferase 8D) (SIAT8-D) (Sialyltransferase St8Sia IV) (ST8SiaIV)"
ruditapes2_c6235	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_c6235	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_c6235	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_c6235	cell division	other biological processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_c6235	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_c6235	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c27853	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c27853	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c27853	glycerol-3-phosphate catabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c27853	carbohydrate metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c27853	oxidation reduction	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c20838	DNA repair	stress response	P	Aprataxin (EC 3.-.-.-) (Forkhead-associated domain histidine triad-like protein) (FHA-HIT)
ruditapes_c20838	DNA repair	DNA metabolism	P	Aprataxin (EC 3.-.-.-) (Forkhead-associated domain histidine triad-like protein) (FHA-HIT)
ruditapes_c20838	response to DNA damage stimulus	stress response	P	Aprataxin (EC 3.-.-.-) (Forkhead-associated domain histidine triad-like protein) (FHA-HIT)
ruditapes_c613	response to nutrient	other biological processes	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (Oligosaccharyl transferase subunit DAD1) (EC 2.4.99.18) (Defender against cell death 1) (DAD-1)
ruditapes_c613	apoptosis	death	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (Oligosaccharyl transferase subunit DAD1) (EC 2.4.99.18) (Defender against cell death 1) (DAD-1)
ruditapes_c613	protein amino acid glycosylation	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (Oligosaccharyl transferase subunit DAD1) (EC 2.4.99.18) (Defender against cell death 1) (DAD-1)
ruditapes_c613	anti-apoptosis	death	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (Oligosaccharyl transferase subunit DAD1) (EC 2.4.99.18) (Defender against cell death 1) (DAD-1)
ruditapes_c613	blastocyst development	developmental processes	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (Oligosaccharyl transferase subunit DAD1) (EC 2.4.99.18) (Defender against cell death 1) (DAD-1)
ruditapes_c613	response to drug	other biological processes	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (Oligosaccharyl transferase subunit DAD1) (EC 2.4.99.18) (Defender against cell death 1) (DAD-1)
ruditapes_c22326	cobalamin biosynthetic process	other metabolic processes	P	Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
ruditapes_c22326	porphyrin biosynthetic process	other metabolic processes	P	Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
ruditapes_s36883	transport	transport	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein) (Oligomycin resistance protein 1)"
ruditapes_s36883	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein) (Oligomycin resistance protein 1)"
ruditapes_s36883	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein) (Oligomycin resistance protein 1)"
ruditapes_s36883	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein) (Oligomycin resistance protein 1)"
ruditapes_s36883	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein) (Oligomycin resistance protein 1)"
ruditapes_s36883	proton transport	transport	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein) (Oligomycin resistance protein 1)"
ruditapes_s36883	ion transport	transport	P	"ATP synthase subunit 9, mitochondrial (Lipid-binding protein) (Oligomycin resistance protein 1)"
ruditapes_s40183	nematode larval development	developmental processes	P	60S ribosomal protein L12
ruditapes_s40183	receptor-mediated endocytosis	transport	P	60S ribosomal protein L12
ruditapes_s40183	receptor-mediated endocytosis	cell organization and biogenesis	P	60S ribosomal protein L12
ruditapes_s40183	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L12
ruditapes_s40183	reproduction	other biological processes	P	60S ribosomal protein L12
ruditapes_s40183	translation	protein metabolism	P	60S ribosomal protein L12
ruditapes_s40183	apoptosis	death	P	60S ribosomal protein L12
ruditapes_s40183	secretion by cell	transport	P	60S ribosomal protein L12
ruditapes_s40183	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L12
ruditapes_c16858	response to virus	other biological processes	P	Epididymal secretory protein E1 (EPI-1) (Niemann Pick type C2 protein homolog)
ruditapes_c16858	cholesterol transport	transport	P	Epididymal secretory protein E1 (EPI-1) (Niemann Pick type C2 protein homolog)
ruditapes_c16858	cholesterol efflux	transport	P	Epididymal secretory protein E1 (EPI-1) (Niemann Pick type C2 protein homolog)
ruditapes_c16858	intracellular sterol transport	transport	P	Epididymal secretory protein E1 (EPI-1) (Niemann Pick type C2 protein homolog)
ruditapes_c16858	intracellular cholesterol transport	transport	P	Epididymal secretory protein E1 (EPI-1) (Niemann Pick type C2 protein homolog)
ruditapes_c16858	cholesterol homeostasis	other biological processes	P	Epididymal secretory protein E1 (EPI-1) (Niemann Pick type C2 protein homolog)
ruditapes_c25714	"transcription, DNA-dependent"	RNA metabolism	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c25714	negative regulation of protein complex assembly	cell organization and biogenesis	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c25714	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c25714	"regulation of transcription, DNA-dependent"	RNA metabolism	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c25714	ventral spinal cord interneuron differentiation	developmental processes	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c25714	transcription from RNA polymerase II promoter	RNA metabolism	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c25714	neural tube closure	developmental processes	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c25714	spinal cord motor neuron differentiation	developmental processes	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c25714	regulation of cell fate specification	other biological processes	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c25714	spinal cord association neuron differentiation	developmental processes	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c25714	thymus development	developmental processes	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c25714	regulation of cell activation	other biological processes	P	LIM domain transcription factor LMO4 (Breast tumor autoantigen) (LIM domain only protein 4) (LMO-4)
ruditapes_c18780	carbohydrate metabolic process	other metabolic processes	P	L-lactate dehydrogenase 1 (L-LDH 1) (EC 1.1.1.27)
ruditapes_c18780	oxidation reduction	other metabolic processes	P	L-lactate dehydrogenase 1 (L-LDH 1) (EC 1.1.1.27)
ruditapes_c18780	glycolysis	other metabolic processes	P	L-lactate dehydrogenase 1 (L-LDH 1) (EC 1.1.1.27)
ruditapes_c18780	cellular carbohydrate metabolic process	other metabolic processes	P	L-lactate dehydrogenase 1 (L-LDH 1) (EC 1.1.1.27)
ruditapes_lrc25342	translation	protein metabolism	P	40S ribosomal protein S7 (S8)
ruditapes_s37250	ribosomal small subunit biogenesis	other biological processes	P	40S ribosomal protein S7 (S8)
ruditapes2_lrc2890	translation	protein metabolism	P	40S ribosomal protein S7 (S8)
ruditapes2_lrc4797	ribosomal small subunit biogenesis	other biological processes	P	40S ribosomal protein S7 (S8)
ruditapes_lrc12146	ribosomal small subunit biogenesis	other biological processes	P	40S ribosomal protein S7 (S8)
ruditapes_s37250	rRNA processing	RNA metabolism	P	40S ribosomal protein S7 (S8)
ruditapes2_lrc4797	translation	protein metabolism	P	40S ribosomal protein S7 (S8)
ruditapes2_lrc4739	rRNA processing	RNA metabolism	P	40S ribosomal protein S7 (S8)
ruditapes_lrc12146	rRNA processing	RNA metabolism	P	40S ribosomal protein S7 (S8)
ruditapes2_lrc4797	rRNA processing	RNA metabolism	P	40S ribosomal protein S7 (S8)
ruditapes_lrc25342	rRNA processing	RNA metabolism	P	40S ribosomal protein S7 (S8)
ruditapes_lrc12146	translation	protein metabolism	P	40S ribosomal protein S7 (S8)
ruditapes2_lrc2890	rRNA processing	RNA metabolism	P	40S ribosomal protein S7 (S8)
ruditapes2_lrc4739	translation	protein metabolism	P	40S ribosomal protein S7 (S8)
ruditapes_lrc25342	ribosomal small subunit biogenesis	other biological processes	P	40S ribosomal protein S7 (S8)
ruditapes2_lrc2890	ribosomal small subunit biogenesis	other biological processes	P	40S ribosomal protein S7 (S8)
ruditapes2_lrc4739	ribosomal small subunit biogenesis	other biological processes	P	40S ribosomal protein S7 (S8)
ruditapes_s37250	translation	protein metabolism	P	40S ribosomal protein S7 (S8)
ruditapes2_lrc1962	translation	protein metabolism	P	40S ribosomal protein S7
ruditapes2_lrc1962	embryonic development	developmental processes	P	40S ribosomal protein S7
ruditapes2_lrc1962	ribosomal small subunit biogenesis	other biological processes	P	40S ribosomal protein S7
ruditapes2_lrc1962	regulation of cell cycle	cell cycle and proliferation	P	40S ribosomal protein S7
ruditapes2_lrc1962	hemopoiesis	developmental processes	P	40S ribosomal protein S7
ruditapes2_lrc1962	rRNA processing	RNA metabolism	P	40S ribosomal protein S7
ruditapes2_c3469	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 4 (P26s4) (26S proteasome AAA-ATPase subunit RPT2) (Proteasome 26S subunit ATPase 1)
ruditapes2_c3469	ATP catabolic process	other metabolic processes	P	26S protease regulatory subunit 4 (P26s4) (26S proteasome AAA-ATPase subunit RPT2) (Proteasome 26S subunit ATPase 1)
ruditapes2_c3469	biological_process	other biological processes	P	26S protease regulatory subunit 4 (P26s4) (26S proteasome AAA-ATPase subunit RPT2) (Proteasome 26S subunit ATPase 1)
ruditapes_c29662	DNA metabolic process	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c29662	DNA recombination	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c29662	DNA repair	stress response	P	Protein RecA (Recombinase A)
ruditapes_c29662	DNA repair	DNA metabolism	P	Protein RecA (Recombinase A)
ruditapes_c29662	response to DNA damage stimulus	stress response	P	Protein RecA (Recombinase A)
ruditapes_c29662	SOS response	stress response	P	Protein RecA (Recombinase A)
ruditapes_c31332	translation	protein metabolism	P	30S ribosomal protein S16
ruditapes2_lrc5010	translation	protein metabolism	P	40S ribosomal protein S16
ruditapes_s39086	translation	protein metabolism	P	40S ribosomal protein S16
ruditapes_lrc33912	biological_process	other biological processes	P	40S ribosomal protein S16
ruditapes_s39086	biological_process	other biological processes	P	40S ribosomal protein S16
ruditapes2_lrc5010	biological_process	other biological processes	P	40S ribosomal protein S16
ruditapes_lrc33912	translation	protein metabolism	P	40S ribosomal protein S16
ruditapes2_lrc4456	biological_process	other biological processes	P	40S ribosomal protein S16
ruditapes2_lrc4456	translation	protein metabolism	P	40S ribosomal protein S16
ruditapes2_c3924	ribosomal small subunit assembly	cell organization and biogenesis	P	40S ribosomal protein S14
ruditapes2_c3924	translation	protein metabolism	P	40S ribosomal protein S14
ruditapes2_c3924	maturation of SSU-rRNA	RNA metabolism	P	40S ribosomal protein S14
ruditapes_s38669	translation	protein metabolism	P	40S ribosomal protein S23
ruditapes_s38669	regulation of translation	protein metabolism	P	40S ribosomal protein S23
ruditapes_lrc33726	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes_s35998	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes2_lrc3199	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes2_lrc4828	biological_process	other biological processes	P	40S ribosomal protein S13
ruditapes_lrc34477	biological_process	other biological processes	P	40S ribosomal protein S13
ruditapes_lrc33240	biological_process	other biological processes	P	40S ribosomal protein S13
ruditapes_lrc33240	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes_s35998	biological_process	other biological processes	P	40S ribosomal protein S13
ruditapes2_lrc4828	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes2_lrc3199	biological_process	other biological processes	P	40S ribosomal protein S13
ruditapes_s38196	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes2_lrc5464	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes_lrc34477	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes_lrc33726	biological_process	other biological processes	P	40S ribosomal protein S13
ruditapes2_lrc5464	biological_process	other biological processes	P	40S ribosomal protein S13
ruditapes_s38196	biological_process	other biological processes	P	40S ribosomal protein S13
ruditapes_lrc32677	translation	protein metabolism	P	40S ribosomal protein S11
ruditapes_lrc32391	translation	protein metabolism	P	40S ribosomal protein S11
ruditapes_lrc37046	biological_process	other biological processes	P	40S ribosomal protein S11
ruditapes_lrc34496	translation	protein metabolism	P	40S ribosomal protein S11
ruditapes_lrc37046	translation	protein metabolism	P	40S ribosomal protein S11
ruditapes2_c5386	biological_process	other biological processes	P	40S ribosomal protein S11
ruditapes2_c5386	translation	protein metabolism	P	40S ribosomal protein S11
ruditapes_lrc33424	translation	protein metabolism	P	40S ribosomal protein S11
ruditapes_lrc33424	biological_process	other biological processes	P	40S ribosomal protein S11
ruditapes_lrc34496	biological_process	other biological processes	P	40S ribosomal protein S11
ruditapes_lrc32391	biological_process	other biological processes	P	40S ribosomal protein S11
ruditapes_lrc32677	biological_process	other biological processes	P	40S ribosomal protein S11
ruditapes_c14109	cell division	other biological processes	P	Abnormal spindle-like microcephaly-associated protein homolog
ruditapes_c14109	cell cycle	cell cycle and proliferation	P	Abnormal spindle-like microcephaly-associated protein homolog
ruditapes_c14109	mitosis	cell cycle and proliferation	P	Abnormal spindle-like microcephaly-associated protein homolog
ruditapes_c14109	mitosis	cell organization and biogenesis	P	Abnormal spindle-like microcephaly-associated protein homolog
ruditapes_c26342	mitosis	cell cycle and proliferation	P	Abnormal spindle-like microcephaly-associated protein homolog (Fragment)
ruditapes_c26342	mitosis	cell organization and biogenesis	P	Abnormal spindle-like microcephaly-associated protein homolog (Fragment)
ruditapes_c26342	cell division	other biological processes	P	Abnormal spindle-like microcephaly-associated protein homolog (Fragment)
ruditapes_c26342	cell cycle	cell cycle and proliferation	P	Abnormal spindle-like microcephaly-associated protein homolog (Fragment)
ruditapes2_lrc5003	mitosis	cell cycle and proliferation	P	Abnormal spindle-like microcephaly-associated protein homolog
ruditapes2_lrc5003	mitosis	cell organization and biogenesis	P	Abnormal spindle-like microcephaly-associated protein homolog
ruditapes2_lrc5003	cell division	other biological processes	P	Abnormal spindle-like microcephaly-associated protein homolog
ruditapes2_lrc5003	cell cycle	cell cycle and proliferation	P	Abnormal spindle-like microcephaly-associated protein homolog
ruditapes2_lrc3316	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes2_lrc3678	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_c6411	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_lrc27966	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes2_lrc5299	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_lrc27966	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes2_lrc3501	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_s36184	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes2_lrc5299	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes2_lrc3316	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes2_lrc3678	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_lrc36571	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes2_lrc3501	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_lrc36571	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_c6411	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_s36184	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_c29800	RNA splicing	RNA metabolism	P	U6 snRNA-associated Sm-like protein LSm6
ruditapes_c29800	tRNA processing	RNA metabolism	P	U6 snRNA-associated Sm-like protein LSm6
ruditapes_c29800	mRNA processing	RNA metabolism	P	U6 snRNA-associated Sm-like protein LSm6
ruditapes_c29800	rRNA processing	RNA metabolism	P	U6 snRNA-associated Sm-like protein LSm6
ruditapes2_c474	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
ruditapes_c3849	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
ruditapes2_c474	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
ruditapes2_c474	RNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
ruditapes_c3849	RNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
ruditapes_c2611	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
ruditapes_c2611	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
ruditapes_c3849	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
ruditapes_c2611	RNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
ruditapes2_c461	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 10B (26S proteasome AAA-ATPase subunit RPT4) (Conserved ATPase domain protein 44) (CADp44) (Proteasome 26S subunit ATPase 6) (Proteasome subunit p42)
ruditapes_c2412	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 10B (26S proteasome AAA-ATPase subunit RPT4) (Conserved ATPase domain protein 44) (CADp44) (Proteasome 26S subunit ATPase 6) (Proteasome subunit p42)
ruditapes_c5897	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 1 (EC 2.7.11.1) (PfCDPK1) (PfCPK)
ruditapes_c5897	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 1 (EC 2.7.11.1) (PfCDPK1) (PfCPK)
ruditapes_c18086	glycolysis	other metabolic processes	P	Phosphoglycerate kinase (EC 2.7.2.3)
ruditapes_c18086	phosphorylation	other metabolic processes	P	Phosphoglycerate kinase (EC 2.7.2.3)
ruditapes_c7207	dendrite development	developmental processes	P	Abl interactor 2 (Abelson interactor 2) (Abi-2)
ruditapes_c7207	dendrite development	cell organization and biogenesis	P	Abl interactor 2 (Abelson interactor 2) (Abi-2)
ruditapes_c7207	cell migration	other biological processes	P	Abl interactor 2 (Abelson interactor 2) (Abi-2)
ruditapes_c7207	learning or memory	other biological processes	P	Abl interactor 2 (Abelson interactor 2) (Abi-2)
ruditapes_c7207	camera-type eye development	developmental processes	P	Abl interactor 2 (Abelson interactor 2) (Abi-2)
ruditapes_s40302	single fertilization	other biological processes	P	Epididymal-specific lipocalin-6
ruditapes_c27381	DNA recombination	DNA metabolism	P	Integrase/recombinase (E2 protein)
ruditapes_c27381	DNA integration	DNA metabolism	P	Integrase/recombinase (E2 protein)
ruditapes_c25955	small GTPase mediated signal transduction	signal transduction	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	multicellular organismal development	developmental processes	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	positive regulation of apoptosis	death	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	cellular response to hydrogen peroxide	stress response	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	transport	transport	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	cytokinesis during cell cycle	cell cycle and proliferation	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	apoptosis	death	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	transformed cell apoptosis	death	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	cell adhesion	cell adhesion	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	endosome to lysosome transport	transport	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	negative regulation of cell cycle	cell cycle and proliferation	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	cell differentiation	other biological processes	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	positive regulation of angiogenesis	developmental processes	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	angiogenesis	developmental processes	P	Rho-related GTP-binding protein RhoB
ruditapes_c25955	protein transport	transport	P	Rho-related GTP-binding protein RhoB
ruditapes_lrc34507	translation	protein metabolism	P	60S ribosomal protein L23a
ruditapes_lrc6872	translation	protein metabolism	P	60S ribosomal protein L23a
ruditapes2_c5587	biological_process	other biological processes	P	60S ribosomal protein L23a
ruditapes2_c5587	translation	protein metabolism	P	60S ribosomal protein L23a
ruditapes2_c5626	biological_process	other biological processes	P	60S ribosomal protein L23a
ruditapes_lrc34507	biological_process	other biological processes	P	60S ribosomal protein L23a
ruditapes_lrc33927	biological_process	other biological processes	P	60S ribosomal protein L23a
ruditapes_lrc6872	biological_process	other biological processes	P	60S ribosomal protein L23a
ruditapes_s39350	translation	protein metabolism	P	60S ribosomal protein L23a
ruditapes_lrc33927	translation	protein metabolism	P	60S ribosomal protein L23a
ruditapes2_c5626	translation	protein metabolism	P	60S ribosomal protein L23a
ruditapes_s39350	biological_process	other biological processes	P	60S ribosomal protein L23a
ruditapes_c945	calcium-mediated signaling	signal transduction	P	Visinin-like protein 1 (VILIP) (21 kDa CABP) (Neural visinin-like protein 1) (NVL-1) (NVP-1)
ruditapes_c945	central nervous system development	developmental processes	P	Visinin-like protein 1 (VILIP) (21 kDa CABP) (Neural visinin-like protein 1) (NVL-1) (NVP-1)
ruditapes_c18311	negative regulation of peptidase activity	other biological processes	P	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1)
ruditapes_c13932	negative regulation of peptidase activity	other biological processes	P	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1)
ruditapes_lrc35383	translation	protein metabolism	P	60S ribosomal protein L23
ruditapes2_lrc4555	translation	protein metabolism	P	60S ribosomal protein L23
ruditapes_lrc21919	translation	protein metabolism	P	40S ribosomal protein S15 (RIG protein)
ruditapes_lrc21919	ribosomal small subunit assembly	cell organization and biogenesis	P	40S ribosomal protein S15 (RIG protein)
ruditapes_lrc33298	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes2_lrc5390	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes_s39749	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes2_lrc4890	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes_lrc33359	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes2_lrc4500	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes_lrc32418	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes_lrc33116	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes_lrc34341	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes_s39802	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes2_lrc5447	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes_lrc33130	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes_c16944	transcription from RNA polymerase II promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC5 (RNA polymerases I, II, and III subunit ABC5) (DNA-directed RNA polymerase III subunit L) (RPB10 homolog)"
ruditapes_c16944	protein amino acid phosphorylation	protein metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC5 (RNA polymerases I, II, and III subunit ABC5) (DNA-directed RNA polymerase III subunit L) (RPB10 homolog)"
ruditapes_c16944	"transcription, DNA-dependent"	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC5 (RNA polymerases I, II, and III subunit ABC5) (DNA-directed RNA polymerase III subunit L) (RPB10 homolog)"
ruditapes_c16944	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC5 (RNA polymerases I, II, and III subunit ABC5) (DNA-directed RNA polymerase III subunit L) (RPB10 homolog)"
ruditapes2_c3873	protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4446	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3873	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3942	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3873	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4446	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes_lrc36704	ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3873	DNA repair	stress response	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3873	DNA repair	DNA metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4745	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes_lrc36704	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4745	protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3873	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4745	protein neddylation	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes_lrc36704	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4745	ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4745	DNA repair	stress response	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4745	DNA repair	DNA metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3942	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3942	ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3873	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes_lrc36704	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3942	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4745	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4446	protein neddylation	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4446	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4745	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3942	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4446	ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes_lrc36704	protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4446	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4446	DNA repair	stress response	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4446	DNA repair	DNA metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3873	ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes_lrc36704	DNA repair	stress response	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes_lrc36704	DNA repair	DNA metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes_lrc36704	protein neddylation	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3942	protein neddylation	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3942	DNA repair	stress response	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3942	DNA repair	DNA metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes_lrc36704	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4446	protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3873	protein neddylation	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c4745	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes2_c3942	protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RBX1 (EC 6.3.2.-) (RING finger protein 75) (RING-box protein 1) (Rbx1)
ruditapes_lrc34114	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_lrc13423	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_lrc32906	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_s36849	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_lrc35429	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes2_lrc5625	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_lrc34632	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes2_lrc5315	translation	protein metabolism	P	60S ribosomal protein L32
ruditapes_s38541	translation	protein metabolism	P	60S ribosomal protein L32
ruditapes2_lrc5554	translation	protein metabolism	P	60S ribosomal protein L32
ruditapes2_lrc5387	translation	protein metabolism	P	60S ribosomal protein L32
ruditapes2_lrc5603	translation	protein metabolism	P	60S ribosomal protein L32
ruditapes_s36089	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes2_lrc3339	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes2_lrc3339	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L11
ruditapes2_lrc3339	protein targeting	transport	P	60S ribosomal protein L11
ruditapes_s36089	rRNA processing	RNA metabolism	P	60S ribosomal protein L11
ruditapes_s36089	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc18142	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc33622	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes2_lrc4923	protein targeting	transport	P	60S ribosomal protein L11
ruditapes_lrc33622	protein targeting	transport	P	60S ribosomal protein L11
ruditapes2_lrc4923	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc35520	protein targeting	transport	P	60S ribosomal protein L11
ruditapes_lrc33763	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L11
ruditapes2_lrc4923	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc35520	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes2_lrc4923	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes_lrc33622	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc35520	rRNA processing	RNA metabolism	P	60S ribosomal protein L11
ruditapes_lrc35520	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc35520	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L11
ruditapes2_lrc4923	rRNA processing	RNA metabolism	P	60S ribosomal protein L11
ruditapes2_lrc3339	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes2_lrc5326	protein targeting	transport	P	60S ribosomal protein L11
ruditapes_lrc33622	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes2_lrc5326	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes_lrc18142	rRNA processing	RNA metabolism	P	60S ribosomal protein L11
ruditapes_lrc33763	protein targeting	transport	P	60S ribosomal protein L11
ruditapes_lrc33763	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes2_lrc5326	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc33763	rRNA processing	RNA metabolism	P	60S ribosomal protein L11
ruditapes_lrc18142	protein targeting	transport	P	60S ribosomal protein L11
ruditapes_lrc18142	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes_lrc33622	rRNA processing	RNA metabolism	P	60S ribosomal protein L11
ruditapes_lrc33763	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes2_lrc5326	rRNA processing	RNA metabolism	P	60S ribosomal protein L11
ruditapes_lrc18142	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L11
ruditapes_s36089	protein targeting	transport	P	60S ribosomal protein L11
ruditapes2_lrc3339	rRNA processing	RNA metabolism	P	60S ribosomal protein L11
ruditapes_s36089	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes2_lrc5326	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc33700	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_c486	translation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c769	positive regulation of translational termination	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c769	positive regulation of translational termination	cell organization and biogenesis	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c486	positive regulation of translational termination	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c486	positive regulation of translational termination	cell organization and biogenesis	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c486	translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c769	peptidyl-lysine modification to hypusine	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c769	translation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c769	translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c769	translational frameshifting	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c486	positive regulation of translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c769	positive regulation of translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c486	peptidyl-lysine modification to hypusine	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c486	translational frameshifting	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes2_c495	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (17 kDa inhibitor of protein kinase C) (Adenosine 5'-monophosphoramidase) (Protein kinase C inhibitor 1) (Protein kinase C-interacting protein 1) (PKCI-1)
ruditapes2_c1405	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (17 kDa inhibitor of protein kinase C) (Adenosine 5'-monophosphoramidase) (Protein kinase C inhibitor 1) (Protein kinase C-interacting protein 1) (PKCI-1)
ruditapes_s37948	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (17 kDa inhibitor of protein kinase C) (Adenosine 5'-monophosphoramidase) (Protein kinase C inhibitor 1) (Protein kinase C-interacting protein 1) (PKCI-1)
ruditapes2_c4581	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (17 kDa inhibitor of protein kinase C) (Adenosine 5'-monophosphoramidase) (Protein kinase C inhibitor 1) (Protein kinase C-interacting protein 1) (PKCI-1)
ruditapes2_c34	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (17 kDa inhibitor of protein kinase C) (Adenosine 5'-monophosphoramidase) (Protein kinase C inhibitor 1) (Protein kinase C-interacting protein 1) (PKCI-1)
ruditapes_c19432	protein amino acid dephosphorylation	protein metabolism	P	Calcineurin subunit B type 1 (Protein phosphatase 2B regulatory subunit 1) (Protein phosphatase 3 regulatory subunit B alpha isoform 1)
ruditapes2_c5457	translation	protein metabolism	P	60S ribosomal protein L38
ruditapes_lrc33366	translation	protein metabolism	P	60S ribosomal protein L38
ruditapes_lrc34522	translation	protein metabolism	P	60S ribosomal protein L38
ruditapes_lrc34376	translation	protein metabolism	P	60S ribosomal protein L38
ruditapes_lrc32539	translation	protein metabolism	P	60S ribosomal protein L38
ruditapes_lrc33393	translation	protein metabolism	P	60S ribosomal protein L38
ruditapes_c15836	proteolysis	protein metabolism	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Furin homolog) (PC3) (Prohormone convertase 1) (Propeptide-processing protease) (Proprotein convertase 1) (PC1)
ruditapes_c22306	proteolysis	protein metabolism	P	Neuroendocrine convertase 1 (NEC 1) (EC 3.4.21.93) (Furin homolog) (PC3) (Prohormone convertase 1) (Propeptide-processing protease) (Proprotein convertase 1) (PC1)
ruditapes_lrc36525	negative regulation of phagocytosis	transport	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	negative regulation of phagocytosis	cell organization and biogenesis	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	regulation of cell cycle	cell cycle and proliferation	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	regulation of protein localization	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	cell cycle	cell cycle and proliferation	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	cell cycle	cell cycle and proliferation	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	positive regulation of apoptosis	death	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	regulation of translation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	regulation of cell cycle	cell cycle and proliferation	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	apoptosis	death	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	gastrulation	developmental processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	negative regulation of cell growth	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	positive regulation of apoptosis	death	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	negative regulation of translation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	cell cycle	cell cycle and proliferation	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	positive regulation of protein homooligomerization	cell organization and biogenesis	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	regulation of cell cycle	cell cycle and proliferation	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	negative regulation of translation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	regulation of growth	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	negative regulation of cell growth	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	regulation of cell division	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	positive regulation of apoptosis	death	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	gastrulation	developmental processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	multicellular organismal development	developmental processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	gastrulation	developmental processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	multicellular organismal development	developmental processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	positive regulation of cell migration	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	positive regulation of apoptosis	death	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	positive regulation of GTPase activity	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	negative regulation of translation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	regulation of protein localization	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	regulation of growth	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	negative regulation of phagocytosis	transport	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	negative regulation of phagocytosis	cell organization and biogenesis	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	gastrulation	developmental processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	apoptosis	death	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	multicellular organismal development	developmental processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	positive regulation of GTPase activity	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	regulation of translation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	negative regulation of cell growth	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	regulation of growth	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	multicellular organismal development	developmental processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	positive regulation of cell migration	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	regulation of cell division	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	rhythmic process	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	positive regulation of cell migration	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	cell cycle	cell cycle and proliferation	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	regulation of protein localization	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	apoptosis	death	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	regulation of translation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	negative regulation of cell growth	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	negative regulation of phagocytosis	cell organization and biogenesis	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	positive regulation of protein homooligomerization	cell organization and biogenesis	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	rhythmic process	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	positive regulation of GTPase activity	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	regulation of translation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	regulation of growth	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	regulation of cell cycle	cell cycle and proliferation	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	apoptosis	death	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	negative regulation of phagocytosis	transport	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	negative regulation of translation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	positive regulation of cell migration	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	regulation of cell division	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	regulation of cell division	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	regulation of protein localization	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	rhythmic process	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	rhythmic process	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	positive regulation of protein homooligomerization	cell organization and biogenesis	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc36525	positive regulation of GTPase activity	other biological processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	negative regulation of phagocytosis	transport	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_lrc30423	negative regulation of phagocytosis	cell organization and biogenesis	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3852	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes2_lrc3101	positive regulation of protein homooligomerization	cell organization and biogenesis	P	Guanine nucleotide-binding protein subunit beta-2-like 1 (Receptor for activated C kinase) (Receptor of activated protein kinase C 1) (RACK1)
ruditapes_c3743	oxidation reduction	other metabolic processes	P	Putative cytochrome P450 138 (EC 1.14.-.-)
ruditapes_c15652	polysaccharide biosynthetic process	other metabolic processes	P	Capsular polysaccharide biosynthesis protein CapA
ruditapes_c15652	lipopolysaccharide biosynthetic process	other metabolic processes	P	Capsular polysaccharide biosynthesis protein CapA
ruditapes_c26581	methylation	other metabolic processes	P	Uncharacterized methyltransferase Mb3374 (EC 2.1.1.-)
ruditapes_c26581	metabolic process	other metabolic processes	P	Uncharacterized methyltransferase Mb3374 (EC 2.1.1.-)
ruditapes_s38286	pyridoxine biosynthetic process	other metabolic processes	P	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase)
ruditapes_s38286	oxidation reduction	other metabolic processes	P	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase)
ruditapes_c13284	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Dihydroorotase (DHOase) (EC 3.5.2.3)
ruditapes_c24409	translation	protein metabolism	P	50S ribosomal protein L32-2
ruditapes2_c4007	menaquinone biosynthetic process	other metabolic processes	P	Demethylmenaquinone methyltransferase (EC 2.1.1.163) (Menaquinone biosynthesis methyltransferase ubiE)
ruditapes2_c4007	methylation	other metabolic processes	P	Demethylmenaquinone methyltransferase (EC 2.1.1.163) (Menaquinone biosynthesis methyltransferase ubiE)
ruditapes_c2854	tRNA processing	RNA metabolism	P	Sulfurtransferase TusA (EC 2.8.1.-) (tRNA 2-thiouridine synthesizing protein A)
ruditapes_c1981	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (Acyl-PO4 G3P acyltransferase) (Acyl-phosphate--glycerol-3-phosphate acyltransferase) (G3P acyltransferase) (GPAT) (EC 2.3.1.n3) (Lysophosphatidic acid synthase) (LPA synthase)
ruditapes_s39566	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional repressor NemR
ruditapes_s39566	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional repressor NemR
ruditapes_c25227	cell division	other biological processes	P	Tyrosine recombinase XerS
ruditapes_c25227	DNA recombination	DNA metabolism	P	Tyrosine recombinase XerS
ruditapes_c25227	cell cycle	cell cycle and proliferation	P	Tyrosine recombinase XerS
ruditapes_c25227	chromosome segregation	other biological processes	P	Tyrosine recombinase XerS
ruditapes_c25227	DNA integration	DNA metabolism	P	Tyrosine recombinase XerS
ruditapes_lrc8537	transport	transport	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_lrc8537	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_lrc8537	aerobic respiration	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_lrc8537	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_c7060	translation	protein metabolism	P	60S ribosomal protein L22 (Heparin-binding protein HBp15)
ruditapes_c12057	regulation of anion transport	transport	P	Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin 2)
ruditapes_c12057	transmembrane transport	transport	P	Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin 2)
ruditapes_c12057	transport	transport	P	Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin 2)
ruditapes_c12057	anion transport	transport	P	Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin 2)
ruditapes_c12057	ion transport	transport	P	Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin 2)
ruditapes_c17851	"transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase-associated transcription-specificity factor RAP94 (Protein H4) (RPO-associated protein of 94 kDa)
ruditapes_c17851	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase-associated transcription-specificity factor RAP94 (Protein H4) (RPO-associated protein of 94 kDa)
ruditapes_c17851	transcription termination	RNA metabolism	P	RNA polymerase-associated transcription-specificity factor RAP94 (Protein H4) (RPO-associated protein of 94 kDa)
ruditapes_c17851	transcription termination	cell organization and biogenesis	P	RNA polymerase-associated transcription-specificity factor RAP94 (Protein H4) (RPO-associated protein of 94 kDa)
ruditapes_c2297	negative regulation of complement activation	stress response	P	Complement control protein C3 (28 kDa protein) (Secretory protein 35) (Protein C3) (VCP)
ruditapes_c2297	negative regulation of complement activation	protein metabolism	P	Complement control protein C3 (28 kDa protein) (Secretory protein 35) (Protein C3) (VCP)
ruditapes_c2297	interspecies interaction between organisms	other biological processes	P	Complement control protein C3 (28 kDa protein) (Secretory protein 35) (Protein C3) (VCP)
ruditapes_c2297	evasion by virus of host immune response	stress response	P	Complement control protein C3 (28 kDa protein) (Secretory protein 35) (Protein C3) (VCP)
ruditapes_c24477	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 28 (Mediator complex subunit 28)
ruditapes_c24477	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 28 (Mediator complex subunit 28)
ruditapes2_lrc4499	nucleosome assembly	cell organization and biogenesis	P	"Histone H3, embryonic"
ruditapes_s39241	nucleosome assembly	cell organization and biogenesis	P	"Histone H3, embryonic"
ruditapes2_c3532	regulation of translation	protein metabolism	P	Coat protein
ruditapes_c31768	translation	protein metabolism	P	Ubiquitin-60S ribosomal protein L40 [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52)]
ruditapes_c29109	pathogenesis	other biological processes	P	Conotoxin Vc6a (Vc6.1)
ruditapes_c14397	transport	transport	P	Probable N-acetylneuraminic acid outer membrane channel protein NanC (Porin NanC)
ruditapes_c14397	carbohydrate transport	transport	P	Probable N-acetylneuraminic acid outer membrane channel protein NanC (Porin NanC)
ruditapes_c14397	ion transport	transport	P	Probable N-acetylneuraminic acid outer membrane channel protein NanC (Porin NanC)
ruditapes_lrc23579	transport	transport	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (SERCA1) (SR Ca(2+)-ATPase 1) (EC 3.6.3.8) (Calcium pump 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_lrc23579	ATP catabolic process	other metabolic processes	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (SERCA1) (SR Ca(2+)-ATPase 1) (EC 3.6.3.8) (Calcium pump 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_lrc23579	negative regulation of striated muscle contraction	other biological processes	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (SERCA1) (SR Ca(2+)-ATPase 1) (EC 3.6.3.8) (Calcium pump 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_lrc23579	calcium ion transport	transport	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (SERCA1) (SR Ca(2+)-ATPase 1) (EC 3.6.3.8) (Calcium pump 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_lrc23579	regulation of striated muscle contraction	other biological processes	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (SERCA1) (SR Ca(2+)-ATPase 1) (EC 3.6.3.8) (Calcium pump 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_lrc23579	ATP biosynthetic process	other metabolic processes	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (SERCA1) (SR Ca(2+)-ATPase 1) (EC 3.6.3.8) (Calcium pump 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_lrc23579	ion transport	transport	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (SERCA1) (SR Ca(2+)-ATPase 1) (EC 3.6.3.8) (Calcium pump 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_lrc23579	cation transport	transport	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (SERCA1) (SR Ca(2+)-ATPase 1) (EC 3.6.3.8) (Calcium pump 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_lrc23579	positive regulation of fast-twitch skeletal muscle fiber contraction	other biological processes	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (SERCA1) (SR Ca(2+)-ATPase 1) (EC 3.6.3.8) (Calcium pump 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_lrc23579	metabolic process	other metabolic processes	P	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (SERCA1) (SR Ca(2+)-ATPase 1) (EC 3.6.3.8) (Calcium pump 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase)"
ruditapes_c17763	microtubule depolymerization	cell organization and biogenesis	P	Kinesin-like protein KIF2C (Kinesin-like protein 6) (Mitotic centromere-associated kinesin) (MCAK)
ruditapes_c17763	mitosis	cell cycle and proliferation	P	Kinesin-like protein KIF2C (Kinesin-like protein 6) (Mitotic centromere-associated kinesin) (MCAK)
ruditapes_c17763	mitosis	cell organization and biogenesis	P	Kinesin-like protein KIF2C (Kinesin-like protein 6) (Mitotic centromere-associated kinesin) (MCAK)
ruditapes_c17763	cell cycle	cell cycle and proliferation	P	Kinesin-like protein KIF2C (Kinesin-like protein 6) (Mitotic centromere-associated kinesin) (MCAK)
ruditapes_c17763	chromosome segregation	other biological processes	P	Kinesin-like protein KIF2C (Kinesin-like protein 6) (Mitotic centromere-associated kinesin) (MCAK)
ruditapes_c17763	regulation of chromosome segregation	other biological processes	P	Kinesin-like protein KIF2C (Kinesin-like protein 6) (Mitotic centromere-associated kinesin) (MCAK)
ruditapes_c17763	cell division	other biological processes	P	Kinesin-like protein KIF2C (Kinesin-like protein 6) (Mitotic centromere-associated kinesin) (MCAK)
ruditapes_c17763	microtubule-based movement	other biological processes	P	Kinesin-like protein KIF2C (Kinesin-like protein 6) (Mitotic centromere-associated kinesin) (MCAK)
ruditapes_c26640	negative regulation of neuron differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	positive regulation of tyrosine phosphorylation of Stat3 protein	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	positive regulation of tyrosine phosphorylation of Stat3 protein	protein metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	positive regulation of cell proliferation	cell cycle and proliferation	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	neural tube development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	glial cell fate commitment	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	negative regulation of oligodendrocyte differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	telencephalon development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	cell differentiation	other biological processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	negative regulation of astrocyte differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	smoothened signaling pathway	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	cell adhesion	cell adhesion	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	cartilage development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	auditory receptor cell fate determination	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	brain development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	protein complex assembly	cell organization and biogenesis	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	chondrocyte differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	astrocyte differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	positive regulation of Notch signaling pathway	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	camera-type eye development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	regulation of cell differentiation	other biological processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	Notch signaling pathway	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	myelination in the central nervous system	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	positive regulation of JAK-STAT cascade	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	multicellular organismal development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	cell maturation	other biological processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	nervous system development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	regulation of myelination	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	neuron differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	positive regulation of BMP signaling pathway	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	auditory receptor cell differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	regulation of neurogenesis	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	oligodendrocyte development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c26640	positive regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c17354	endocytosis	transport	P	C-type lectin domain family 4 member F (C-type lectin superfamily member 13) (C-type lectin 13) (Kupffer cell receptor)
ruditapes_c17354	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 4 member F (C-type lectin superfamily member 13) (C-type lectin 13) (Kupffer cell receptor)
ruditapes_c17354	biological_process	other biological processes	P	C-type lectin domain family 4 member F (C-type lectin superfamily member 13) (C-type lectin 13) (Kupffer cell receptor)
ruditapes_lrc23131	biological_process	other biological processes	P	C-type lectin domain family 4 member F (C-type lectin superfamily member 13) (C-type lectin 13) (Kupffer cell receptor)
ruditapes_lrc23131	endocytosis	transport	P	C-type lectin domain family 4 member F (C-type lectin superfamily member 13) (C-type lectin 13) (Kupffer cell receptor)
ruditapes_lrc23131	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 4 member F (C-type lectin superfamily member 13) (C-type lectin 13) (Kupffer cell receptor)
ruditapes2_c1058	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-7 (EC 3.4.25.1) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) (Proteasome subunit Z)
ruditapes_c6482	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-7 (EC 3.4.25.1) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) (Proteasome subunit Z)
ruditapes2_c1058	proteolysis	protein metabolism	P	Proteasome subunit beta type-7 (EC 3.4.25.1) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) (Proteasome subunit Z)
ruditapes_c6482	proteolysis	protein metabolism	P	Proteasome subunit beta type-7 (EC 3.4.25.1) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) (Proteasome subunit Z)
ruditapes_c30292	protein autoprocessing	protein metabolism	P	Cathepsin E (EC 3.4.23.34)
ruditapes_c30292	antigen processing and presentation of exogenous peptide antigen via MHC class II	other biological processes	P	Cathepsin E (EC 3.4.23.34)
ruditapes_c30292	proteolysis	protein metabolism	P	Cathepsin E (EC 3.4.23.34)
ruditapes_c24776	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	histone deacetylation	protein metabolism	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	histone deacetylation	cell organization and biogenesis	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	protein amino acid deacetylation	protein metabolism	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	"transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	odontogenesis of dentine-containing tooth	developmental processes	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	embryonic digit morphogenesis	developmental processes	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	neuron differentiation	developmental processes	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	positive regulation of cell proliferation	cell cycle and proliferation	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	dendrite development	developmental processes	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	dendrite development	cell organization and biogenesis	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	positive regulation of oligodendrocyte differentiation	developmental processes	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	negative regulation of neuron projection development	developmental processes	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	negative regulation of neuron projection development	cell organization and biogenesis	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	chromatin modification	cell organization and biogenesis	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	epidermal cell differentiation	developmental processes	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	negative regulation of apoptosis	death	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c24776	hippocampus development	developmental processes	P	Histone deacetylase 2 (HD2) (EC 3.5.1.98) (YY1 transcription factor-binding protein)
ruditapes_c20527	response to organic cyclic substance	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to wounding	stress response	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to drug	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	regulation of the force of heart contraction	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	positive regulation of acetylcholine metabolic process	other metabolic processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	positive regulation of acetylcholine metabolic process	cell-cell signaling	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to calcium ion	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to heat	stress response	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	sperm capacitation	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	aging	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	positive regulation of mitosis	cell cycle and proliferation	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	positive regulation of mitosis	cell organization and biogenesis	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	eating behavior	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	brain development	developmental processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	MAPKKK cascade	signal transduction	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to organic substance	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	negative regulation of protein amino acid phosphorylation	protein metabolism	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to oxidative stress	stress response	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to toxin	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	positive regulation of cAMP-mediated signaling	signal transduction	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	negative regulation of MAPKKK cascade	signal transduction	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	regulation of neurotransmitter levels	cell-cell signaling	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to activity	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to electrical stimulus	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to cAMP	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to ethanol	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to organic nitrogen	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to stress	stress response	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	negative regulation of peptidase activity	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	response to corticosterone stimulus	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c20527	spermatid development	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c9583	regulation of calcium ion transport	transport	P	Stromal interaction molecule 1
ruditapes_c9583	transport	transport	P	Stromal interaction molecule 1
ruditapes_c9583	calcium ion transport	transport	P	Stromal interaction molecule 1
ruditapes_c9583	cation transport	transport	P	Stromal interaction molecule 1
ruditapes_c9583	activation of store-operated calcium channel activity	transport	P	Stromal interaction molecule 1
ruditapes_c9583	detection of calcium ion	other biological processes	P	Stromal interaction molecule 1
ruditapes_c9583	ion transport	transport	P	Stromal interaction molecule 1
ruditapes_c11894	signal transduction	signal transduction	P	Neurotensin receptor type 2 (NT-R-2) (NTR2) (Low-affinity levocabastine-sensitive neurotensin receptor) (NTRL)
ruditapes_c11894	G-protein coupled receptor protein signaling pathway	signal transduction	P	Neurotensin receptor type 2 (NT-R-2) (NTR2) (Low-affinity levocabastine-sensitive neurotensin receptor) (NTRL)
ruditapes2_lrc4765	BMP signaling pathway	signal transduction	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4775	BMP signaling pathway	signal transduction	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4775	transforming growth factor beta receptor signaling pathway	signal transduction	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4775	mitosis	cell cycle and proliferation	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4765	cell cycle	cell cycle and proliferation	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4765	chromosome segregation	other biological processes	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4765	cell division	other biological processes	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4775	cell cycle	cell cycle and proliferation	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4775	proteolysis	protein metabolism	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4765	ubiquitin-dependent protein catabolic process	protein metabolism	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4765	proteolysis	protein metabolism	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4775	chromosome segregation	other biological processes	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4765	protein deubiquitination	protein metabolism	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4775	cell division	other biological processes	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4775	ubiquitin-dependent protein catabolic process	protein metabolism	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4775	protein deubiquitination	protein metabolism	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4775	mitosis	cell organization and biogenesis	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4765	mitosis	cell cycle and proliferation	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4765	mitosis	cell organization and biogenesis	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes2_lrc4765	transforming growth factor beta receptor signaling pathway	signal transduction	P	"Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.4.19.12) (Deubiquitinating enzyme FAF-X) (Fat facets homolog) (Fat facets protein-related, X-linked) (Ubiquitin carboxyl-terminal hydrolase FAM) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific protease 9, X chromosome) (Ubiquitin-specific-processing protease FAF-X)"
ruditapes_c2152	female pregnancy	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Integral membrane-associated protein 1)
ruditapes_c234	female pregnancy	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Integral membrane-associated protein 1)
ruditapes_c234	cell adhesion	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Integral membrane-associated protein 1)
ruditapes_c234	trypsinogen activation	protein metabolism	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Integral membrane-associated protein 1)
ruditapes_c234	cell division	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Integral membrane-associated protein 1)
ruditapes_c2152	cell division	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Integral membrane-associated protein 1)
ruditapes_c2152	trypsinogen activation	protein metabolism	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Integral membrane-associated protein 1)
ruditapes_c2152	cell adhesion	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Integral membrane-associated protein 1)
ruditapes_c234	cell cycle	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Integral membrane-associated protein 1)
ruditapes_c2152	cell cycle	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Integral membrane-associated protein 1)
ruditapes_c19196	ion transport	transport	P	Sodium/calcium exchanger 1 (Na(+)/Ca(2+)-exchange protein 1)
ruditapes_c19196	cell communication	other biological processes	P	Sodium/calcium exchanger 1 (Na(+)/Ca(2+)-exchange protein 1)
ruditapes_c19196	embryonic placenta development	developmental processes	P	Sodium/calcium exchanger 1 (Na(+)/Ca(2+)-exchange protein 1)
ruditapes_c19196	sodium ion transport	transport	P	Sodium/calcium exchanger 1 (Na(+)/Ca(2+)-exchange protein 1)
ruditapes_c19196	embryonic heart tube development	developmental processes	P	Sodium/calcium exchanger 1 (Na(+)/Ca(2+)-exchange protein 1)
ruditapes_c19196	transport	transport	P	Sodium/calcium exchanger 1 (Na(+)/Ca(2+)-exchange protein 1)
ruditapes_c19196	calcium ion transport	transport	P	Sodium/calcium exchanger 1 (Na(+)/Ca(2+)-exchange protein 1)
ruditapes_c19196	transmembrane transport	transport	P	Sodium/calcium exchanger 1 (Na(+)/Ca(2+)-exchange protein 1)
ruditapes_c19196	cardiac muscle cell development	other biological processes	P	Sodium/calcium exchanger 1 (Na(+)/Ca(2+)-exchange protein 1)
ruditapes_c19196	regulation of the force of heart contraction	other biological processes	P	Sodium/calcium exchanger 1 (Na(+)/Ca(2+)-exchange protein 1)
ruditapes2_lrc5146	amino acid transport	transport	P	Cationic amino acid transporter 3 (CAT-3) (CAT3) (Cationic amino acid transporter y+) (Solute carrier family 7 member 3)
ruditapes2_lrc5146	transport	transport	P	Cationic amino acid transporter 3 (CAT-3) (CAT3) (Cationic amino acid transporter y+) (Solute carrier family 7 member 3)
ruditapes2_lrc5146	arginine transport	transport	P	Cationic amino acid transporter 3 (CAT-3) (CAT3) (Cationic amino acid transporter y+) (Solute carrier family 7 member 3)
ruditapes2_lrc5146	ornithine transport	transport	P	Cationic amino acid transporter 3 (CAT-3) (CAT3) (Cationic amino acid transporter y+) (Solute carrier family 7 member 3)
ruditapes2_lrc5146	regulation of TOR signaling pathway	signal transduction	P	Cationic amino acid transporter 3 (CAT-3) (CAT3) (Cationic amino acid transporter y+) (Solute carrier family 7 member 3)
ruditapes2_lrc5146	lysine transport	transport	P	Cationic amino acid transporter 3 (CAT-3) (CAT3) (Cationic amino acid transporter y+) (Solute carrier family 7 member 3)
ruditapes_c11299	negative regulation of translational initiation in response to stress	stress response	P	Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma)
ruditapes_c11299	negative regulation of translational initiation in response to stress	protein metabolism	P	Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma)
ruditapes_c11299	regulation of translation	protein metabolism	P	Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma)
ruditapes_c11299	response to peptide hormone stimulus	other biological processes	P	Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma)
ruditapes_c11299	translation	protein metabolism	P	Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma)
ruditapes_c11299	response to heat	stress response	P	Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma)
ruditapes_c11299	biosynthetic process	other metabolic processes	P	Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma)
ruditapes_c11299	cellular response to stimulus	other biological processes	P	Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma)
ruditapes_c11299	oligodendrocyte development	developmental processes	P	Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma)
ruditapes_c11299	translational initiation	protein metabolism	P	Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma)
ruditapes_c11299	response to glucose stimulus	other biological processes	P	Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma)
ruditapes_c29564	transport	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes2_c218	calcium ion transport into cytosol	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes2_c218	telencephalon development	developmental processes	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes2_c218	ion transport	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes_c29564	ion transport	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes_c29564	cell communication	other biological processes	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes_c29564	telencephalon development	developmental processes	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes_c29564	sodium ion transport	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes2_c218	calcium ion transport	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes2_c218	sodium ion transport	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes_c29564	calcium ion transport into cytosol	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes_c29564	transmembrane transport	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes2_c218	transport	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes2_c218	transmembrane transport	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes_c29564	calcium ion transport	transport	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes2_c218	cell communication	other biological processes	P	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3)
ruditapes_c2578	protein transport	transport	P	Unconventional myosin-Vb (Myosin heavy chain myr 6)
ruditapes_c2578	vesicle-mediated transport	transport	P	Unconventional myosin-Vb (Myosin heavy chain myr 6)
ruditapes_c25438	regulation of protein localization	other biological processes	P	Unconventional myosin-Vb (Myosin heavy chain myr 6)
ruditapes_c2578	transport	transport	P	Unconventional myosin-Vb (Myosin heavy chain myr 6)
ruditapes_c25438	transport	transport	P	Unconventional myosin-Vb (Myosin heavy chain myr 6)
ruditapes_c2578	regulation of protein localization	other biological processes	P	Unconventional myosin-Vb (Myosin heavy chain myr 6)
ruditapes_c25438	protein transport	transport	P	Unconventional myosin-Vb (Myosin heavy chain myr 6)
ruditapes_c25438	vesicle-mediated transport	transport	P	Unconventional myosin-Vb (Myosin heavy chain myr 6)
ruditapes_c11567	response to cAMP	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to hormone stimulus	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to hypoxia	stress response	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	marginal zone B cell differentiation	developmental processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	regulation of cell adhesion	cell adhesion	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of cell-matrix adhesion	cell adhesion	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to stress	stress response	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of JNK cascade	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of JNK cascade	stress response	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	protein amino acid phosphorylation	protein metabolism	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of protein kinase activity	other metabolic processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	vascular endothelial growth factor receptor signaling pathway	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to glucose stimulus	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	regulation of release of sequestered calcium ion into cytosol	transport	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to calcium ion	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	epidermal growth factor receptor signaling pathway	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	sprouting angiogenesis	developmental processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	phosphorylation	other metabolic processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of anti-apoptosis	death	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of cell growth	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to drug	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	bone resorption	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to reactive oxygen species	stress response	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to ethanol	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	focal adhesion formation	cell adhesion	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	focal adhesion formation	cell organization and biogenesis	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	chemokine-mediated signaling pathway	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of JUN kinase activity	protein metabolism	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	cell surface receptor linked signal transduction	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	glial cell proliferation	cell cycle and proliferation	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	glial cell proliferation	developmental processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to cocaine	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	regulation of cell shape	cell organization and biogenesis	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	MAPKKK cascade	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	elevation of cytosolic calcium ion concentration	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of phosphoinositide 3-kinase activity	other metabolic processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of JUN kinase activity	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of JUN kinase activity	stress response	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of ERK1 and ERK2 cascade	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	blood vessel endothelial cell migration	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	activation of Rac GTPase activity	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	actin filament organization	cell organization and biogenesis	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	neuron projection development	developmental processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	neuron projection development	cell organization and biogenesis	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	negative regulation of bone mineralization	developmental processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of translation	protein metabolism	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	activation of Janus kinase activity	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	activation of Janus kinase activity	protein metabolism	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	negative regulation of ossification	developmental processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of cell proliferation	cell cycle and proliferation	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	oocyte maturation	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of cell migration	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	signal complex assembly	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	signal complex assembly	cell organization and biogenesis	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	cell adhesion	cell adhesion	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	regulation of inositol trisphosphate biosynthetic process	other metabolic processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to mechanical stimulus	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	negative regulation of apoptosis	death	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	regulation of macrophage chemotaxis	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	integrin-mediated signaling pathway	signal transduction	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of neuron projection development	developmental processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of neuron projection development	cell organization and biogenesis	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	stress fiber formation	cell organization and biogenesis	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	angiogenesis	developmental processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of actin filament polymerization	protein metabolism	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	positive regulation of actin filament polymerization	cell organization and biogenesis	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	peptidyl-tyrosine phosphorylation	protein metabolism	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to hydrogen peroxide	stress response	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to lithium ion	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to osmotic stress	stress response	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	cell differentiation	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	response to organic nitrogen	other biological processes	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c11567	negative regulation of cell proliferation	cell cycle and proliferation	P	Protein-tyrosine kinase 2-beta (EC 2.7.10.2) (Calcium-dependent tyrosine kinase) (CADTK) (Calcium-regulated non-receptor proline-rich tyrosine kinase) (Cell adhesion kinase beta) (CAK-beta) (CAKB) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2)
ruditapes_c17551	signal transduction	signal transduction	P	SPARC-like protein 1 (Extracellular matrix protein 2) (Matrix glycoprotein Sc1)
ruditapes_c19542	lipid biosynthetic process	other metabolic processes	P	Estradiol 17 beta-dehydrogenase 5 (EC 1.1.1.-) (17-beta-HSD 5)
ruditapes_c19542	steroid biosynthetic process	other metabolic processes	P	Estradiol 17 beta-dehydrogenase 5 (EC 1.1.1.-) (17-beta-HSD 5)
ruditapes_c19542	oxidation reduction	other metabolic processes	P	Estradiol 17 beta-dehydrogenase 5 (EC 1.1.1.-) (17-beta-HSD 5)
ruditapes_c19542	steroid metabolic process	other metabolic processes	P	Estradiol 17 beta-dehydrogenase 5 (EC 1.1.1.-) (17-beta-HSD 5)
ruditapes_c12039	cardiac muscle contraction	other biological processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	diaphragm contraction	other biological processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	metabolic process	other metabolic processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	tongue morphogenesis	developmental processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	regulation of the force of heart contraction	other biological processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	striated muscle contraction	other biological processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	vacuolar sequestering	other biological processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	neuromuscular process controlling posture	other biological processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	neuromuscular process controlling balance	other biological processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	lysosome organization	cell organization and biogenesis	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	muscle organ development	developmental processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	carbohydrate metabolic process	other metabolic processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	glycogen metabolic process	other metabolic processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	glycogen catabolic process	other metabolic processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	locomotory behavior	other biological processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	heart morphogenesis	developmental processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	ventricular cardiac muscle morphogenesis	developmental processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	muscle maintenance	other biological processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_c12039	tissue development	developmental processes	P	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)
ruditapes_lrc16666	D-gluconate metabolic process	other metabolic processes	P	"6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)"
ruditapes_lrc16666	pentose-phosphate shunt	other metabolic processes	P	"6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)"
ruditapes_lrc16666	oxidation reduction	other metabolic processes	P	"6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)"
ruditapes_c15614	carbohydrate metabolic process	other metabolic processes	P	Beta-galactosidase (Beta-gal) (EC 3.2.1.23) (Lactase)
ruditapes_c15614	metabolic process	other metabolic processes	P	Beta-galactosidase (Beta-gal) (EC 3.2.1.23) (Lactase)
ruditapes_c26061	transport	transport	P	Beta-(1-->2)glucan export ATP-binding/permease protein NdvA (EC 3.6.3.42)
ruditapes_c26061	ATP catabolic process	other metabolic processes	P	Beta-(1-->2)glucan export ATP-binding/permease protein NdvA (EC 3.6.3.42)
ruditapes_c26061	transmembrane transport	transport	P	Beta-(1-->2)glucan export ATP-binding/permease protein NdvA (EC 3.6.3.42)
ruditapes_c26061	carbohydrate transport	transport	P	Beta-(1-->2)glucan export ATP-binding/permease protein NdvA (EC 3.6.3.42)
ruditapes_c22922	regulation of cell shape	cell organization and biogenesis	P	Penicillin-binding protein 2D (PBP-2D) (PBP2d)
ruditapes_c22922	response to antibiotic	other biological processes	P	Penicillin-binding protein 2D (PBP-2D) (PBP2d)
ruditapes_c22922	peptidoglycan biosynthetic process	other metabolic processes	P	Penicillin-binding protein 2D (PBP-2D) (PBP2d)
ruditapes_c22922	peptidoglycan-based cell wall biogenesis	other biological processes	P	Penicillin-binding protein 2D (PBP-2D) (PBP2d)
ruditapes_c22922	cell wall organization	cell organization and biogenesis	P	Penicillin-binding protein 2D (PBP-2D) (PBP2d)
ruditapes_c28774	polysaccharide biosynthetic process	other metabolic processes	P	Putative glycosyltransferase EpsE (EC 2.4.-.-)
ruditapes2_c2423	polysaccharide biosynthetic process	other metabolic processes	P	Transmembrane protein EpsG
ruditapes_c2566	transport	transport	P	Fe(3+)-transport system permease protein FbpB 2 (Iron(III)-transport system permease protein FbpB 2)
ruditapes2_c3452	iron ion homeostasis	other biological processes	P	Fe(3+)-transport system permease protein FbpB 2 (Iron(III)-transport system permease protein FbpB 2)
ruditapes2_c3452	ion transport	transport	P	Fe(3+)-transport system permease protein FbpB 2 (Iron(III)-transport system permease protein FbpB 2)
ruditapes_c2566	ion transport	transport	P	Fe(3+)-transport system permease protein FbpB 2 (Iron(III)-transport system permease protein FbpB 2)
ruditapes_c2566	iron ion homeostasis	other biological processes	P	Fe(3+)-transport system permease protein FbpB 2 (Iron(III)-transport system permease protein FbpB 2)
ruditapes2_c3452	transport	transport	P	Fe(3+)-transport system permease protein FbpB 2 (Iron(III)-transport system permease protein FbpB 2)
ruditapes_s35245	metabolic process	other metabolic processes	P	Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) (ManNAc-6-P epimerase)
ruditapes_s35245	N-acetylmannosamine metabolic process	other metabolic processes	P	Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) (ManNAc-6-P epimerase)
ruditapes_s35245	carbohydrate metabolic process	other metabolic processes	P	Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) (ManNAc-6-P epimerase)
ruditapes2_c1318	metabolic process	other metabolic processes	P	Carboxylesterase NlhH (EC 3.1.1.1)
ruditapes2_c1318	catabolic process	other metabolic processes	P	Carboxylesterase NlhH (EC 3.1.1.1)
ruditapes_c10215	catabolic process	other metabolic processes	P	Carboxylesterase NlhH (EC 3.1.1.1)
ruditapes_c10215	metabolic process	other metabolic processes	P	Carboxylesterase NlhH (EC 3.1.1.1)
ruditapes_c4580	metabolic process	other metabolic processes	P	Putative phenylalanine aminotransferase (EC 2.6.1.-)
ruditapes_c4580	biosynthetic process	other metabolic processes	P	Putative phenylalanine aminotransferase (EC 2.6.1.-)
ruditapes_c14744	metabolic process	other metabolic processes	P	Putative phenylalanine aminotransferase (EC 2.6.1.-)
ruditapes_c14744	biosynthetic process	other metabolic processes	P	Putative phenylalanine aminotransferase (EC 2.6.1.-)
ruditapes_c14744	histidine biosynthetic process	other metabolic processes	P	Putative phenylalanine aminotransferase (EC 2.6.1.-)
ruditapes_c4580	histidine biosynthetic process	other metabolic processes	P	Putative phenylalanine aminotransferase (EC 2.6.1.-)
ruditapes_c24515	metabolic process	other metabolic processes	P	Probable aromatic acid decarboxylase (EC 4.1.1.-)
ruditapes_c15480	response to stress	stress response	P	Universal stress protein Slr1101 (USP Slr1101)
ruditapes_lrc34455	response to stress	stress response	P	Universal stress protein Slr1101 (USP Slr1101)
ruditapes2_c1990	arginine biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes2_c1990	phosphorylation	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes2_c1990	proline biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes2_c1990	cellular amino acid biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c19734	oxidation reduction	other metabolic processes	P	Nitrate reductase (EC 1.7.99.4)
ruditapes_c19734	nitrate assimilation	other metabolic processes	P	Nitrate reductase (EC 1.7.99.4)
ruditapes_c29276	oxidation reduction	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] reductase 2 (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 2)
ruditapes_c29276	fatty acid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] reductase 2 (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 2)
ruditapes_c29276	metabolic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] reductase 2 (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 2)
ruditapes_c29276	lipid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] reductase 2 (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 2)
ruditapes_c26341	cysteine biosynthetic process from serine	other metabolic processes	P	Serine acetyltransferase (SAT) (EC 2.3.1.30)
ruditapes_c26341	cysteine biosynthetic process	other metabolic processes	P	Serine acetyltransferase (SAT) (EC 2.3.1.30)
ruditapes_c26341	cellular amino acid biosynthetic process	other metabolic processes	P	Serine acetyltransferase (SAT) (EC 2.3.1.30)
ruditapes_c7276	response to stress	stress response	P	Universal stress protein Sll1388 (USP Sll1388)
ruditapes_c19672	response to stress	stress response	P	Universal stress protein Sll1388 (USP Sll1388)
ruditapes_c9630	response to stress	stress response	P	Universal stress protein Sll1388 (USP Sll1388)
ruditapes_c10760	response to stress	stress response	P	Universal stress protein Sll1388 (USP Sll1388)
ruditapes_c7058	response to stress	stress response	P	Universal stress protein Sll1388 (USP Sll1388)
ruditapes2_c469	response to stress	stress response	P	Universal stress protein Sll1388 (USP Sll1388)
ruditapes2_c2351	response to stress	stress response	P	Universal stress protein Sll1388 (USP Sll1388)
ruditapes_c15363	DNA topological change	DNA metabolism	P	Reverse gyrase [Includes: Helicase (EC 3.6.4.12); Topoisomerase (EC 5.99.1.3)]
ruditapes_s39889	biotin biosynthetic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_s39889	metabolic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_s39889	biosynthetic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c29594	response to stress	stress response	P	Universal stress protein in QAH/OAS sulfhydrylase 3'region (USP)
ruditapes_c3645	response to stress	stress response	P	Universal stress protein in QAH/OAS sulfhydrylase 3'region (USP)
ruditapes_c6261	response to stress	stress response	P	Universal stress protein in QAH/OAS sulfhydrylase 3'region (USP)
ruditapes2_c20	response to stress	stress response	P	Universal stress protein in QAH/OAS sulfhydrylase 3'region (USP)
ruditapes_c11801	DNA replication	DNA metabolism	P	DNA polymerase III PolC-type (PolIII) (EC 2.7.7.7)
ruditapes_c32013	ATP catabolic process	other metabolic processes	P	Putative ABC transporter ATP-binding protein MG015 homolog
ruditapes_c32013	transport	transport	P	Putative ABC transporter ATP-binding protein MG015 homolog
ruditapes_c32013	transmembrane transport	transport	P	Putative ABC transporter ATP-binding protein MG015 homolog
ruditapes_c30090	transport	transport	P	Uncharacterized ABC transporter permease MG468 homolog
ruditapes_c17040	transport	transport	P	Uncharacterized ABC transporter permease MG468 homolog
ruditapes_c14132	phosphorylation	other metabolic processes	P	"Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I)"
ruditapes_c14132	carbohydrate transport	transport	P	"Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I)"
ruditapes_c14132	phosphoenolpyruvate-dependent sugar phosphotransferase system	signal transduction	P	"Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I)"
ruditapes_c14132	phosphoenolpyruvate-dependent sugar phosphotransferase system	transport	P	"Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I)"
ruditapes_c14132	transport	transport	P	"Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I)"
ruditapes2_c3537	RNA processing	RNA metabolism	P	Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)
ruditapes2_c3537	rRNA catabolic process	RNA metabolism	P	Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)
ruditapes2_lrc5856	transport	transport	P	Probable ABC transporter permease protein MG189 homolog
ruditapes_c31168	valyl-tRNA aminoacylation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c31168	valyl-tRNA aminoacylation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13286	valyl-tRNA aminoacylation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13286	valyl-tRNA aminoacylation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c31168	translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13286	translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c31168	tRNA aminoacylation for protein translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c31168	tRNA aminoacylation for protein translation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13286	tRNA aminoacylation for protein translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13286	tRNA aminoacylation for protein translation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c19319	protein folding	protein metabolism	P	DnaJ-like protein MG200 homolog
ruditapes_lrc18630	chromosome organization	cell organization and biogenesis	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c24158	DNA recombination	DNA metabolism	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c24158	chromosome condensation	cell organization and biogenesis	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_lrc18630	DNA recombination	DNA metabolism	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c24158	DNA repair	stress response	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_lrc18630	sister chromatid cohesion	cell cycle and proliferation	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_lrc18630	sister chromatid cohesion	cell organization and biogenesis	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_lrc18630	DNA repair	stress response	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_lrc18630	DNA repair	DNA metabolism	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c24158	DNA repair	DNA metabolism	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c24158	sister chromatid cohesion	cell cycle and proliferation	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c24158	sister chromatid cohesion	cell organization and biogenesis	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_lrc18630	chromosome condensation	cell organization and biogenesis	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c24158	chromosome organization	cell organization and biogenesis	P	Chromosome partition protein Smc (Protein P115 homolog)
ruditapes_c30973	transmembrane transport	transport	P	Uncharacterized protein MG294 homolog
ruditapes_c20088	metabolic process	other metabolic processes	P	Putative protein phosphatase (EC 3.1.3.16)
ruditapes_s38900	metabolic process	other metabolic processes	P	Putative riboflavin biosynthesis protein RibF [Includes: Riboflavin kinase (EC 2.7.1.26) (Flavokinase); FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthase)]
ruditapes_s38900	riboflavin biosynthetic process	other metabolic processes	P	Putative riboflavin biosynthesis protein RibF [Includes: Riboflavin kinase (EC 2.7.1.26) (Flavokinase); FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthase)]
ruditapes_c15037	oxidation reduction	other metabolic processes	P	Uncharacterized zinc-type alcohol dehydrogenase-like protein YahK (EC 1.-.-.-)
ruditapes_c25417	metabolic process	other metabolic processes	P	Putative formate acetyltransferase 3 (EC 2.3.1.54) (Pyruvate formate-lyase 3)
ruditapes_c25417	glucose metabolic process	other metabolic processes	P	Putative formate acetyltransferase 3 (EC 2.3.1.54) (Pyruvate formate-lyase 3)
ruditapes_c30306	proteolysis	protein metabolism	P	Uncharacterized serine protease YdgD (EC 3.4.21.-)
ruditapes_lrc27210	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Probable ATP-dependent helicase YoaA (EC 3.6.4.12)
ruditapes_c18968	DNA repair	stress response	P	Uncharacterized protein YegI
ruditapes_c18968	DNA repair	DNA metabolism	P	Uncharacterized protein YegI
ruditapes_c18968	protein amino acid phosphorylation	protein metabolism	P	Uncharacterized protein YegI
ruditapes_c13660	negative regulation of endopeptidase activity	other biological processes	P	Putative UPF0192 protein YfaS
ruditapes_c29785	transport	transport	P	Putative uncharacterized transporter YgaY
ruditapes_c29785	transmembrane transport	transport	P	Putative uncharacterized transporter YgaY
ruditapes_c9159	carbohydrate metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase YcjT (EC 3.2.1.-)
ruditapes_c9159	metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase YcjT (EC 3.2.1.-)
ruditapes_lrc33285	cellular response to hydrogen peroxide	stress response	P	Cyclic di-GMP phosphodiesterase YfgF (EC 3.1.4.52)
ruditapes_c26393	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable HTH-type transcriptional regulator YgaV
ruditapes_c26393	"transcription, DNA-dependent"	RNA metabolism	P	Probable HTH-type transcriptional regulator YgaV
ruditapes_c19531	oxidation reduction	other metabolic processes	P	Hydrogenase-4 component G (EC 1.-.-.-)
ruditapes_c19066	cytolysis of cells of another organism	other biological processes	P	"Hemolysin E, chromosomal (Cytotoxin ClyA) (Hemolysis-inducing protein) (Latent pore-forming 34 kDa hemolysin) (Silent hemolysin SheA)"
ruditapes_c19066	cytolysis	death	P	"Hemolysin E, chromosomal (Cytotoxin ClyA) (Hemolysis-inducing protein) (Latent pore-forming 34 kDa hemolysin) (Silent hemolysin SheA)"
ruditapes_lrc34319	cell adhesion	cell adhesion	P	Uncharacterized fimbrial-like protein YdeQ
ruditapes_c10026	thiamin metabolic process	other metabolic processes	P	Uncharacterized oxidoreductase YajO (EC 1.-.-.-)
ruditapes_c10026	oxidation reduction	other metabolic processes	P	Uncharacterized oxidoreductase YajO (EC 1.-.-.-)
ruditapes_c24211	metabolic process	other metabolic processes	P	Probable cation-transporting ATPase HI
ruditapes_c24211	metal ion transport	transport	P	Probable cation-transporting ATPase HI
ruditapes_c24211	ATP biosynthetic process	other metabolic processes	P	Probable cation-transporting ATPase HI
ruditapes_c24211	cation transport	transport	P	Probable cation-transporting ATPase HI
ruditapes_c24211	ATP metabolic process	other metabolic processes	P	Probable cation-transporting ATPase HI
ruditapes_c1964	intron homing	DNA metabolism	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c4381	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c1964	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c23959	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c1964	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c23959	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c4381	intein-mediated protein splicing	protein metabolism	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c23959	intron homing	DNA metabolism	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c4381	intron homing	DNA metabolism	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c1964	intein-mediated protein splicing	protein metabolism	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c4381	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c23959	intein-mediated protein splicing	protein metabolism	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Endonuclease PI-PkoI (EC 3.1.-.-) (IVS-A) (Pko pol-1 intein); Endonuclease PI-PkoII (EC 3.1.-.-) (IVS-B) (Pko pol-2 intein)]
ruditapes_c27151	S-adenosylmethionine biosynthetic process	other metabolic processes	P	S-adenosylmethionine synthase (AdoMet synthase) (EC 2.5.1.6) (MAT) (Methionine adenosyltransferase)
ruditapes_c27151	one-carbon compound metabolic process	other metabolic processes	P	S-adenosylmethionine synthase (AdoMet synthase) (EC 2.5.1.6) (MAT) (Methionine adenosyltransferase)
ruditapes2_c555	metabolic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R)
ruditapes2_c555	L-ascorbic acid metabolic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R)
ruditapes2_c555	oxidation reduction	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R)
ruditapes2_c555	xenobiotic metabolic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R)
ruditapes2_c555	xenobiotic catabolic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R)
ruditapes2_c555	L-ascorbic acid biosynthetic process	other metabolic processes	P	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R)
ruditapes_c38168	multicellular organismal development	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	Notch receptor processing	signal transduction	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	Notch receptor processing	protein metabolism	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	organ morphogenesis	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	myoblast differentiation	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	keratinocyte differentiation	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	regulation of cell proliferation	cell cycle and proliferation	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	inner ear development	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	nervous system development	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	cell fate determination	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	negative regulation of neuron differentiation	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	positive regulation of myeloid cell differentiation	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	cell communication	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	positive regulation of Notch signaling pathway	signal transduction	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	hemopoiesis	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	organ morphogenesis	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	auditory receptor cell differentiation	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	negative regulation of cell differentiation	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	myoblast differentiation	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	regulation of cell migration	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	negative regulation of fat cell differentiation	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	morphogenesis of an epithelial sheet	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	response to muramyl dipeptide	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	endothelial cell differentiation	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	Notch signaling pathway	signal transduction	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	auditory receptor cell differentiation	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	angiogenesis	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	keratinocyte differentiation	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	negative regulation of fat cell differentiation	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	response to muramyl dipeptide	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	angiogenesis	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	hemopoiesis	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	positive regulation of Notch signaling pathway	signal transduction	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	endothelial cell differentiation	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	negative regulation of cell differentiation	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	nervous system development	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	inner ear development	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	regulation of cell proliferation	cell cycle and proliferation	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	negative regulation of neuron differentiation	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	cell fate determination	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	positive regulation of myeloid cell differentiation	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	cell communication	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	Notch signaling pathway	signal transduction	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	multicellular organismal development	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c38168	regulation of cell migration	other biological processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	morphogenesis of an epithelial sheet	developmental processes	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	Notch receptor processing	signal transduction	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes2_c306	Notch receptor processing	protein metabolism	P	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)
ruditapes_c18430	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	"regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	transcription from RNA polymerase II promoter	RNA metabolism	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	embryonic development	developmental processes	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	cell differentiation	other biological processes	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	"transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	epidermis development	developmental processes	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	epithelial cell differentiation	developmental processes	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	anatomical structure morphogenesis	other biological processes	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	blastocyst development	developmental processes	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	mammary gland involution	developmental processes	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	inflammatory response	stress response	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	extracellular matrix organization	cell organization and biogenesis	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	multicellular organismal development	developmental processes	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c18430	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
ruditapes_c30798	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c30798	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c30798	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c30798	induction of apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c30798	apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c17672	induction of apoptosis via death domain receptors	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c30798	regulation of apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c17672	signal transduction	signal transduction	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c17672	regulation of apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c30798	induction of apoptosis via death domain receptors	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c17672	apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c17672	induction of apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c17672	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c17672	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c17672	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes_c30798	signal transduction	signal transduction	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain) (RIP-associated protein with a death domain)
ruditapes2_c2012	biomineral formation	developmental processes	P	Phosphate-regulating neutral endopeptidase (EC 3.4.24.-) (Metalloendopeptidase homolog PEX) (Vitamin D-resistant hypophosphatemic rickets protein) (X-linked hypophosphatemia protein) (HYP)
ruditapes2_c2012	proteolysis	protein metabolism	P	Phosphate-regulating neutral endopeptidase (EC 3.4.24.-) (Metalloendopeptidase homolog PEX) (Vitamin D-resistant hypophosphatemic rickets protein) (X-linked hypophosphatemia protein) (HYP)
ruditapes2_c2012	protein modification process	protein metabolism	P	Phosphate-regulating neutral endopeptidase (EC 3.4.24.-) (Metalloendopeptidase homolog PEX) (Vitamin D-resistant hypophosphatemic rickets protein) (X-linked hypophosphatemia protein) (HYP)
ruditapes2_c2012	skeletal system development	developmental processes	P	Phosphate-regulating neutral endopeptidase (EC 3.4.24.-) (Metalloendopeptidase homolog PEX) (Vitamin D-resistant hypophosphatemic rickets protein) (X-linked hypophosphatemia protein) (HYP)
ruditapes2_c2012	cell-cell signaling	cell-cell signaling	P	Phosphate-regulating neutral endopeptidase (EC 3.4.24.-) (Metalloendopeptidase homolog PEX) (Vitamin D-resistant hypophosphatemic rickets protein) (X-linked hypophosphatemia protein) (HYP)
ruditapes_c8484	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 6B homolog
ruditapes_c16127	oxidation reduction	other metabolic processes	P	Fatty acid synthase subunit alpha (EC 2.3.1.86) [Includes: Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Beta-ketoacyl reductase); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) (Beta-ketoacyl synthase)]
ruditapes_c16127	macromolecule biosynthetic process	other metabolic processes	P	Fatty acid synthase subunit alpha (EC 2.3.1.86) [Includes: Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Beta-ketoacyl reductase); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) (Beta-ketoacyl synthase)]
ruditapes_c16127	metabolic process	other metabolic processes	P	Fatty acid synthase subunit alpha (EC 2.3.1.86) [Includes: Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Beta-ketoacyl reductase); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) (Beta-ketoacyl synthase)]
ruditapes_c16127	biosynthetic process	other metabolic processes	P	Fatty acid synthase subunit alpha (EC 2.3.1.86) [Includes: Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Beta-ketoacyl reductase); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) (Beta-ketoacyl synthase)]
ruditapes_c16127	fatty acid biosynthetic process	other metabolic processes	P	Fatty acid synthase subunit alpha (EC 2.3.1.86) [Includes: Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Beta-ketoacyl reductase); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) (Beta-ketoacyl synthase)]
ruditapes_c17450	regulation of mitotic cell cycle	cell cycle and proliferation	P	Nucleoporin nup186 (Nuclear pore protein nup186)
ruditapes_c17450	transport	transport	P	Nucleoporin nup186 (Nuclear pore protein nup186)
ruditapes_c17450	cell division	other biological processes	P	Nucleoporin nup186 (Nuclear pore protein nup186)
ruditapes_c17450	nucleocytoplasmic transport	transport	P	Nucleoporin nup186 (Nuclear pore protein nup186)
ruditapes_c28405	protein transport	transport	P	Protein transport protein sec61 subunit alpha
ruditapes_c28405	posttranslational protein targeting to membrane	transport	P	Protein transport protein sec61 subunit alpha
ruditapes_c28405	transport	transport	P	Protein transport protein sec61 subunit alpha
ruditapes_c28405	"SRP-dependent cotranslational protein targeting to membrane, translocation"	transport	P	Protein transport protein sec61 subunit alpha
ruditapes2_c607	cell differentiation	other biological processes	P	Aminopeptidase N (AP-N) (bAPN) (EC 3.4.11.2) (Alanyl aminopeptidase) (Aminopeptidase M) (AP-M) (Microsomal aminopeptidase) (CD antigen CD13)
ruditapes2_c607	multicellular organismal development	developmental processes	P	Aminopeptidase N (AP-N) (bAPN) (EC 3.4.11.2) (Alanyl aminopeptidase) (Aminopeptidase M) (AP-M) (Microsomal aminopeptidase) (CD antigen CD13)
ruditapes2_c607	proteolysis	protein metabolism	P	Aminopeptidase N (AP-N) (bAPN) (EC 3.4.11.2) (Alanyl aminopeptidase) (Aminopeptidase M) (AP-M) (Microsomal aminopeptidase) (CD antigen CD13)
ruditapes2_c607	angiogenesis	developmental processes	P	Aminopeptidase N (AP-N) (bAPN) (EC 3.4.11.2) (Alanyl aminopeptidase) (Aminopeptidase M) (AP-M) (Microsomal aminopeptidase) (CD antigen CD13)
ruditapes_s36259	translation	protein metabolism	P	40S ribosomal protein S4
ruditapes_c26950	synaptic transmission	cell-cell signaling	P	Neuropeptide Y receptor type 6 (NPY6-R)
ruditapes_c26950	neuropeptide signaling pathway	signal transduction	P	Neuropeptide Y receptor type 6 (NPY6-R)
ruditapes_c26950	signal transduction	signal transduction	P	Neuropeptide Y receptor type 6 (NPY6-R)
ruditapes_c26950	G-protein coupled receptor protein signaling pathway	signal transduction	P	Neuropeptide Y receptor type 6 (NPY6-R)
ruditapes2_c2610	axon midline choice point recognition	developmental processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	axon midline choice point recognition	cell organization and biogenesis	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	mRNA polyadenylation	RNA metabolism	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	visual learning	other biological processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	negative regulation of peptidase activity	other biological processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	positive regulation of mitotic cell cycle	cell cycle and proliferation	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	regulation of synapse structure and activity	cell-cell signaling	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	adult locomotory behavior	other biological processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	axon cargo transport	transport	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	locomotory behavior	other biological processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	dendrite development	cell organization and biogenesis	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	neuron projection development	developmental processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	neuron projection development	cell organization and biogenesis	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	protein amino acid phosphorylation	protein metabolism	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	mating behavior	other biological processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	neuron remodeling	developmental processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	collateral sprouting in the absence of injury	developmental processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	collateral sprouting in the absence of injury	cell organization and biogenesis	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	ionotropic glutamate receptor signaling pathway	signal transduction	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	regulation of epidermal growth factor receptor activity	signal transduction	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	regulation of epidermal growth factor receptor activity	other metabolic processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	dendrite development	developmental processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	cell adhesion	cell adhesion	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	Notch signaling pathway	signal transduction	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	apoptosis	death	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	regulation of translation	protein metabolism	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	cellular copper ion homeostasis	other biological processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	extracellular matrix organization	cell organization and biogenesis	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	endocytosis	transport	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	endocytosis	cell organization and biogenesis	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	axonogenesis	developmental processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	axonogenesis	cell organization and biogenesis	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	G2 phase of mitotic cell cycle	cell cycle and proliferation	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes2_c2610	regulation of multicellular organism growth	other biological processes	P	Amyloid beta A4 protein (ABPP) (APP) (Alzheimer disease amyloid A4 protein homolog) [Cleaved into: N-APP; Soluble APP-alpha (S-APP-alpha); Soluble APP-beta (S-APP-beta); C99; Beta-amyloid protein 42 (Beta-APP42); Beta-amyloid protein 40 (Beta-APP40); C83; P3(42); P3(40); C80; Gamma-secretase C-terminal fragment 59 (Gamma-CTF(59)); Gamma-secretase C-terminal fragment 57 (Gamma-CTF(57)); Gamma-secretase C-terminal fragment 50 (Gamma-CTF(50)); C31]
ruditapes_c22490	response to virus	other biological processes	P	Epididymal secretory protein E1 (EPV20) (Niemann Pick type C2 protein homolog)
ruditapes_c22490	intracellular sterol transport	transport	P	Epididymal secretory protein E1 (EPV20) (Niemann Pick type C2 protein homolog)
ruditapes_c22490	cholesterol efflux	transport	P	Epididymal secretory protein E1 (EPV20) (Niemann Pick type C2 protein homolog)
ruditapes_c22490	cholesterol homeostasis	other biological processes	P	Epididymal secretory protein E1 (EPV20) (Niemann Pick type C2 protein homolog)
ruditapes_c22490	intracellular cholesterol transport	transport	P	Epididymal secretory protein E1 (EPV20) (Niemann Pick type C2 protein homolog)
ruditapes_c22490	cholesterol transport	transport	P	Epididymal secretory protein E1 (EPV20) (Niemann Pick type C2 protein homolog)
ruditapes_c13491	immune response	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes_c22018	immune response	other biological processes	P	"Tumor necrosis factor (Cachectin) (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) [Cleaved into: Tumor necrosis factor, membrane form (N-terminal fragment) (NTF); Intracellular domain 1 (ICD1); Intracellular domain 2 (ICD2); C-domain 1; C-domain 2; Tumor necrosis factor, soluble form]"
ruditapes_c27203	positive regulation of MHC class I biosynthetic process	other metabolic processes	P	MHC class II transactivator (CIITA)
ruditapes_c27203	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	MHC class II transactivator (CIITA)
ruditapes_c27203	response to antibiotic	other biological processes	P	MHC class II transactivator (CIITA)
ruditapes_c27203	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	MHC class II transactivator (CIITA)
ruditapes_c27203	"transcription, DNA-dependent"	RNA metabolism	P	MHC class II transactivator (CIITA)
ruditapes_c27203	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	MHC class II transactivator (CIITA)
ruditapes_c27203	response to interferon-gamma	stress response	P	MHC class II transactivator (CIITA)
ruditapes_c27203	"regulation of transcription, DNA-dependent"	RNA metabolism	P	MHC class II transactivator (CIITA)
ruditapes_c27203	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	MHC class II transactivator (CIITA)
ruditapes_s38211	single fertilization	other biological processes	P	Zona pellucida sperm-binding protein 3 (Sperm receptor) (Zona pellucida C protein) (Zona pellucida glycoprotein 3) (Zp-3) [Cleaved into: Processed zona pellucida sperm-binding protein 3]
ruditapes_c6154	single fertilization	other biological processes	P	Zona pellucida sperm-binding protein 3 (Sperm receptor) (Zona pellucida C protein) (Zona pellucida glycoprotein 3) (Zp-3) [Cleaved into: Processed zona pellucida sperm-binding protein 3]
ruditapes_c1499	multicellular organismal development	developmental processes	P	T-box-containing protein TBXT
ruditapes_c481	"regulation of transcription, DNA-dependent"	RNA metabolism	P	T-box-containing protein TBXT
ruditapes_c1183	"regulation of transcription, DNA-dependent"	RNA metabolism	P	T-box-containing protein TBXT
ruditapes_c1183	"transcription, DNA-dependent"	RNA metabolism	P	T-box-containing protein TBXT
ruditapes_c1499	"regulation of transcription, DNA-dependent"	RNA metabolism	P	T-box-containing protein TBXT
ruditapes_c481	multicellular organismal development	developmental processes	P	T-box-containing protein TBXT
ruditapes_c1499	"transcription, DNA-dependent"	RNA metabolism	P	T-box-containing protein TBXT
ruditapes_c481	"transcription, DNA-dependent"	RNA metabolism	P	T-box-containing protein TBXT
ruditapes_c1183	multicellular organismal development	developmental processes	P	T-box-containing protein TBXT
ruditapes2_lrc4851	toll-like receptor 7 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	toll-like receptor 7 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor 4 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor 4 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	DNA repair	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	DNA repair	DNA metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	MyD88-dependent toll-like receptor signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	activation of NF-kappaB-inducing kinase activity	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	activation of innate immune response	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	toll-like receptor 2 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	toll-like receptor 2 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor 5 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor 5 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	activation of innate immune response	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	DNA repair	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	DNA repair	DNA metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	bypass DNA synthesis	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	bypass DNA synthesis	DNA metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	toll-like receptor 4 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	toll-like receptor 4 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	translation	protein metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	translation	protein metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	DNA repair	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	DNA repair	DNA metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor 3 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor 3 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor 3 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor 3 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	translation	protein metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	activation of innate immune response	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	activation of NF-kappaB-inducing kinase activity	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor 4 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor 4 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	bypass DNA synthesis	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	bypass DNA synthesis	DNA metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	toll-like receptor signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	activation of NF-kappaB-inducing kinase activity	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	toll-like receptor 5 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	toll-like receptor 5 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	bypass DNA synthesis	DNA metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor 4 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor 4 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor 3 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor 3 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	toll-like receptor signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	activation of innate immune response	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	DNA repair	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	DNA repair	DNA metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	bypass DNA synthesis	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor 5 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor 5 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor 5 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor 5 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor 7 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor 7 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor 2 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor 2 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor 7 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	toll-like receptor 7 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	activation of NF-kappaB-inducing kinase activity	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	toll-like receptor 3 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	toll-like receptor 3 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_lrc33929	MyD88-dependent toll-like receptor signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor 7 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	translation	protein metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor 2 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	toll-like receptor 2 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_c5656	MyD88-dependent toll-like receptor signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	MyD88-dependent toll-like receptor signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor 2 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor 2 signaling pathway	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	bypass DNA synthesis	stress response	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4851	bypass DNA synthesis	DNA metabolism	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes2_lrc4098	toll-like receptor 7 signaling pathway	signal transduction	P	Ubiquitin-40S ribosomal protein S27a (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; 40S ribosomal protein S27a]
ruditapes_c9003	angiogenesis	developmental processes	P	Neuropilin-1 (A5 protein)
ruditapes_c9003	nervous system development	developmental processes	P	Neuropilin-1 (A5 protein)
ruditapes_c9003	multicellular organismal development	developmental processes	P	Neuropilin-1 (A5 protein)
ruditapes_c9003	cell adhesion	cell adhesion	P	Neuropilin-1 (A5 protein)
ruditapes_c9003	cell differentiation	other biological processes	P	Neuropilin-1 (A5 protein)
ruditapes_lrc34669	negative regulation of catalytic activity	other biological processes	P	Apovitellenin-1 (Apo-VLDL-II) (Apo-II) (Apovitellenin I) (Very low density lipoprotein II)
ruditapes_lrc34669	lipid metabolic process	other metabolic processes	P	Apovitellenin-1 (Apo-VLDL-II) (Apo-II) (Apovitellenin I) (Very low density lipoprotein II)
ruditapes_lrc28166	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_c4275	ethanol oxidation	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c4275	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc28971	metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST P1-1) (GST class-pi)
ruditapes_c6026	aromatic compound catabolic process	other metabolic processes	P	Epoxide hydrolase (EC 3.3.2.10) (Epoxide hydratase) (Fragments)
ruditapes_s39705	proteolysis	protein metabolism	P	Duodenase-1 (EC 3.4.21.-) (Duodenase I) (Duodenum serine protease)
ruditapes2_c443	transport	transport	P	"Fatty acid-binding protein, liver (Fatty acid-binding protein 1) (Liver basic FABP) (LB-FABP) (Liver bile acid-binding protein) (L-BABP) (Liver-type fatty acid-binding protein) (L-FABP)"
ruditapes_c20797	sensory perception of pain	other biological processes	P	Bifunctional epoxide hydrolase 2 [Includes: Cytosolic epoxide hydrolase 2 (CEH) (EC 3.3.2.10) (Epoxide hydratase) (Soluble epoxide hydrolase) (SEH); Lipid-phosphate phosphatase (EC 3.1.3.76)]
ruditapes_c20797	positive regulation of blood pressure	other biological processes	P	Bifunctional epoxide hydrolase 2 [Includes: Cytosolic epoxide hydrolase 2 (CEH) (EC 3.3.2.10) (Epoxide hydratase) (Soluble epoxide hydrolase) (SEH); Lipid-phosphate phosphatase (EC 3.1.3.76)]
ruditapes_c20797	prostaglandin production during acute inflammatory response	stress response	P	Bifunctional epoxide hydrolase 2 [Includes: Cytosolic epoxide hydrolase 2 (CEH) (EC 3.3.2.10) (Epoxide hydratase) (Soluble epoxide hydrolase) (SEH); Lipid-phosphate phosphatase (EC 3.1.3.76)]
ruditapes_c20797	response to toxin	other biological processes	P	Bifunctional epoxide hydrolase 2 [Includes: Cytosolic epoxide hydrolase 2 (CEH) (EC 3.3.2.10) (Epoxide hydratase) (Soluble epoxide hydrolase) (SEH); Lipid-phosphate phosphatase (EC 3.1.3.76)]
ruditapes_c20797	aromatic compound catabolic process	other metabolic processes	P	Bifunctional epoxide hydrolase 2 [Includes: Cytosolic epoxide hydrolase 2 (CEH) (EC 3.3.2.10) (Epoxide hydratase) (Soluble epoxide hydrolase) (SEH); Lipid-phosphate phosphatase (EC 3.1.3.76)]
ruditapes_c20797	inflammatory response	stress response	P	Bifunctional epoxide hydrolase 2 [Includes: Cytosolic epoxide hydrolase 2 (CEH) (EC 3.3.2.10) (Epoxide hydratase) (Soluble epoxide hydrolase) (SEH); Lipid-phosphate phosphatase (EC 3.1.3.76)]
ruditapes_c20797	linoleic acid metabolic process	other metabolic processes	P	Bifunctional epoxide hydrolase 2 [Includes: Cytosolic epoxide hydrolase 2 (CEH) (EC 3.3.2.10) (Epoxide hydratase) (Soluble epoxide hydrolase) (SEH); Lipid-phosphate phosphatase (EC 3.1.3.76)]
ruditapes_c17113	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)
ruditapes_c17113	protein folding	protein metabolism	P	T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)
ruditapes2_c3533	ethanol oxidation	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes2_c5635	ethanol oxidation	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes2_c5635	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes2_c3533	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c8236	folic acid and derivative biosynthetic process	other metabolic processes	P	"5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) (5,10-methenyl-tetrahydrofolate synthetase) (MTHFS) (Methenyl-THF synthetase)"
ruditapes_c8236	tetrahydrofolate metabolic process	other metabolic processes	P	"5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) (5,10-methenyl-tetrahydrofolate synthetase) (MTHFS) (Methenyl-THF synthetase)"
ruditapes_c3500	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_c2479	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_c30017	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_c4248	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_lrc33054	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_c2006	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes2_c333	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_c147	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes2_c610	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_c1434	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_c623	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes2_c150	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_c196	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_lrc8887	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_c5132	negative regulation of peptidase activity	other biological processes	P	Leech-derived tryptase inhibitor C (LDTI-C) [Cleaved into: Leech-derived tryptase inhibitor B (LDTI-B); Leech-derived tryptase inhibitor A (LDTI-A)]
ruditapes_c26743	carbohydrate metabolic process	other metabolic processes	P	Transaldolase (EC 2.2.1.2) (Fragments)
ruditapes_c26743	pentose-phosphate shunt	other metabolic processes	P	Transaldolase (EC 2.2.1.2) (Fragments)
ruditapes_c8977	respiratory electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide III)
ruditapes_c8977	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide III)
ruditapes_c8977	aerobic electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide III)
ruditapes_lrc35424	oxidation reduction	other metabolic processes	P	Aldehyde oxidase (EC 1.2.3.1) (Retinal oxidase)
ruditapes_c13084	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase 1 (EC 1.1.1.1)
ruditapes_c2759	defense response	stress response	P	Defensin MGD-1 (Fragment)
ruditapes_c2759	innate immune response	stress response	P	Defensin MGD-1 (Fragment)
ruditapes_c2759	defense response to bacterium	stress response	P	Defensin MGD-1 (Fragment)
ruditapes_c11126	tubulin complex assembly	cell organization and biogenesis	P	Tubulin-specific chaperone A (TCP1-chaperonin cofactor A) (Tubulin-folding cofactor A) (CFA)
ruditapes_lrc16002	cysteine biosynthetic process	other metabolic processes	P	Cysteine synthase (CSase) (EC 2.5.1.47) (O-acetylserine (thiol)-lyase) (OAS-TL) (O-acetylserine sulfhydrylase)
ruditapes_lrc16002	cellular amino acid biosynthetic process	other metabolic processes	P	Cysteine synthase (CSase) (EC 2.5.1.47) (O-acetylserine (thiol)-lyase) (OAS-TL) (O-acetylserine sulfhydrylase)
ruditapes_lrc16002	metabolic process	other metabolic processes	P	Cysteine synthase (CSase) (EC 2.5.1.47) (O-acetylserine (thiol)-lyase) (OAS-TL) (O-acetylserine sulfhydrylase)
ruditapes_lrc16002	cysteine biosynthetic process from serine	other metabolic processes	P	Cysteine synthase (CSase) (EC 2.5.1.47) (O-acetylserine (thiol)-lyase) (OAS-TL) (O-acetylserine sulfhydrylase)
ruditapes_lrc26991	xylem histogenesis	developmental processes	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	positive regulation of translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	peptidyl-lysine modification to hypusine	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	positive regulation of translational termination	cell organization and biogenesis	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	programmed cell death	death	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	response to wounding	stress response	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	response to cadmium ion	other biological processes	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	host programmed cell death induced by symbiont	death	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	response to bacterium	other biological processes	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	positive regulation of translational termination	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	translational frameshifting	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	defense response to bacterium	stress response	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes_lrc26991	translation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D)
ruditapes2_c6406	proteolysis	protein metabolism	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_c19446	proteolysis	protein metabolism	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_lrc32174	proteolysis	protein metabolism	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_lrc32174	digestion	other biological processes	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_lrc35771	digestion	other biological processes	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_lrc35771	proteolysis	protein metabolism	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes2_c6406	digestion	other biological processes	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes2_lrc4360	digestion	other biological processes	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_lrc29280	digestion	other biological processes	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_c19446	digestion	other biological processes	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes2_lrc4360	proteolysis	protein metabolism	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_lrc33169	proteolysis	protein metabolism	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_lrc29280	proteolysis	protein metabolism	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_lrc37945	proteolysis	protein metabolism	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_lrc33169	digestion	other biological processes	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes_lrc37945	digestion	other biological processes	P	Chymotrypsin B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B]
ruditapes2_lrc3158	pentose-phosphate shunt	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes_lrc36732	D-gluconate metabolic process	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes_c2930	D-gluconate metabolic process	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes_lrc38709	pentose-phosphate shunt	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes_lrc38709	oxidation reduction	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes2_lrc3158	D-gluconate metabolic process	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes_lrc36732	pentose-phosphate shunt	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes2_lrc3158	oxidation reduction	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes_lrc36732	oxidation reduction	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes_c2930	pentose-phosphate shunt	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes_c2930	oxidation reduction	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes_lrc38709	D-gluconate metabolic process	other metabolic processes	P	"6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating (EC 1.1.1.44) (GNTZII)"
ruditapes_c6034	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (Adenosine 5'-monophosphoramidase) (P13.7)
ruditapes_lrc36743	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (Adenosine 5'-monophosphoramidase) (P13.7)
ruditapes2_c5360	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (Adenosine 5'-monophosphoramidase) (P13.7)
ruditapes_c5346	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (Adenosine 5'-monophosphoramidase) (P13.7)
ruditapes_lrc33187	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (Adenosine 5'-monophosphoramidase) (P13.7)
ruditapes2_c5341	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (Adenosine 5'-monophosphoramidase) (P13.7)
ruditapes_c4285	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (Adenosine 5'-monophosphoramidase) (P13.7)
ruditapes2_lrc3395	defense response	stress response	P	Big defensin
ruditapes2_lrc5539	defense response	stress response	P	Big defensin
ruditapes_lrc34482	defense response to fungus	stress response	P	Big defensin
ruditapes2_lrc6542	defense response to Gram-positive bacterium	stress response	P	Big defensin
ruditapes2_lrc5539	defense response to fungus	stress response	P	Big defensin
ruditapes2_lrc3556	defense response to bacterium	stress response	P	Big defensin
ruditapes_lrc34959	defense response	stress response	P	Big defensin
ruditapes_lrc34482	defense response	stress response	P	Big defensin
ruditapes2_lrc5539	defense response to bacterium	stress response	P	Big defensin
ruditapes2_lrc3793	defense response	stress response	P	Big defensin
ruditapes_lrc34959	killing of cells of another organism	other biological processes	P	Big defensin
ruditapes2_lrc3556	killing of cells of another organism	other biological processes	P	Big defensin
ruditapes2_lrc3793	killing of cells of another organism	other biological processes	P	Big defensin
ruditapes2_lrc3395	defense response to bacterium	stress response	P	Big defensin
ruditapes2_lrc3556	defense response to fungus	stress response	P	Big defensin
ruditapes_lrc34959	defense response to Gram-positive bacterium	stress response	P	Big defensin
ruditapes2_lrc3395	defense response to fungus	stress response	P	Big defensin
ruditapes2_c1890	defense response to fungus	stress response	P	Big defensin
ruditapes2_lrc6542	defense response to fungus	stress response	P	Big defensin
ruditapes2_lrc5539	defense response to Gram-negative bacterium	stress response	P	Big defensin
ruditapes2_c1890	defense response to Gram-negative bacterium	stress response	P	Big defensin
ruditapes2_lrc3395	defense response to Gram-negative bacterium	stress response	P	Big defensin
ruditapes2_lrc3556	defense response to Gram-positive bacterium	stress response	P	Big defensin
ruditapes2_lrc3556	defense response to Gram-negative bacterium	stress response	P	Big defensin
ruditapes2_c1890	defense response to Gram-positive bacterium	stress response	P	Big defensin
ruditapes2_lrc3793	defense response to fungus	stress response	P	Big defensin
ruditapes2_c1890	killing of cells of another organism	other biological processes	P	Big defensin
ruditapes2_lrc3793	defense response to Gram-positive bacterium	stress response	P	Big defensin
ruditapes2_c1890	defense response to bacterium	stress response	P	Big defensin
ruditapes_lrc34959	defense response to fungus	stress response	P	Big defensin
ruditapes2_lrc3395	defense response to Gram-positive bacterium	stress response	P	Big defensin
ruditapes_lrc34482	defense response to Gram-negative bacterium	stress response	P	Big defensin
ruditapes2_lrc6542	defense response to bacterium	stress response	P	Big defensin
ruditapes_lrc34482	defense response to bacterium	stress response	P	Big defensin
ruditapes2_lrc6542	defense response to Gram-negative bacterium	stress response	P	Big defensin
ruditapes2_c1890	defense response	stress response	P	Big defensin
ruditapes2_lrc3793	defense response to Gram-negative bacterium	stress response	P	Big defensin
ruditapes_lrc34482	defense response to Gram-positive bacterium	stress response	P	Big defensin
ruditapes2_lrc6542	killing of cells of another organism	other biological processes	P	Big defensin
ruditapes2_lrc3793	defense response to bacterium	stress response	P	Big defensin
ruditapes2_lrc6542	defense response	stress response	P	Big defensin
ruditapes_lrc34482	killing of cells of another organism	other biological processes	P	Big defensin
ruditapes_lrc34959	defense response to bacterium	stress response	P	Big defensin
ruditapes2_lrc5539	defense response to Gram-positive bacterium	stress response	P	Big defensin
ruditapes2_lrc3395	killing of cells of another organism	other biological processes	P	Big defensin
ruditapes2_lrc3556	defense response	stress response	P	Big defensin
ruditapes2_lrc5539	killing of cells of another organism	other biological processes	P	Big defensin
ruditapes_lrc34959	defense response to Gram-negative bacterium	stress response	P	Big defensin
ruditapes2_c3190	oxidation reduction	other metabolic processes	P	"Cytochrome c oxidase subunit 4 isoform 2, mitochondrial (EC 1.9.3.1) (Cytochrome c oxidase subunit IV isoform 2) (COX IV-2)"
ruditapes2_c3283	oxidation reduction	other metabolic processes	P	"Cytochrome c oxidase subunit 4 isoform 2, mitochondrial (EC 1.9.3.1) (Cytochrome c oxidase subunit IV isoform 2) (COX IV-2)"
ruditapes_c2111	oxidation reduction	other metabolic processes	P	"Cytochrome c oxidase subunit 4 isoform 2, mitochondrial (EC 1.9.3.1) (Cytochrome c oxidase subunit IV isoform 2) (COX IV-2)"
ruditapes_c19690	anion transport	transport	P	Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin)
ruditapes_c19690	transport	transport	P	Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin)
ruditapes_c19690	ion transport	transport	P	Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin)
ruditapes_c19690	regulation of anion transport	transport	P	Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin)
ruditapes_c19690	transmembrane transport	transport	P	Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin)
ruditapes_c22105	proteolysis	protein metabolism	P	Peptidyl-Lys metalloendopeptidase (MEP) (EC 3.4.24.20) (GfMEP)
ruditapes_c30850	cellular calcium ion homeostasis	other biological processes	P	Nucleobindin-2 (DNA-binding protein NEFA) (Prepronesfatin) [Cleaved into: Nesfatin-1]
ruditapes_c4087	cellular calcium ion homeostasis	other biological processes	P	Nucleobindin-2 (DNA-binding protein NEFA) (Prepronesfatin) [Cleaved into: Nesfatin-1]
ruditapes_c9483	metabolic process	other metabolic processes	P	"Glutaryl-CoA dehydrogenase, mitochondrial (GCD) (EC 1.3.8.6) (Fragment)"
ruditapes_c9483	oxidation reduction	other metabolic processes	P	"Glutaryl-CoA dehydrogenase, mitochondrial (GCD) (EC 1.3.8.6) (Fragment)"
ruditapes_c27741	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Glial hyaluronate-binding protein) (GHAP) (Large fibroblast proteoglycan) (PG-M)
ruditapes_s39010	transport	transport	P	"Fatty acid-binding protein 2, liver (Liver basic FABP) (LB-FABP) (Liver-type fatty acid-binding protein) (L-FABP)"
ruditapes_c20661	metabolic process	other metabolic processes	P	DNA polymerase II small subunit (Pol II) (EC 2.7.7.7) (DP1)
ruditapes_c20661	DNA replication	DNA metabolism	P	DNA polymerase II small subunit (Pol II) (EC 2.7.7.7) (DP1)
ruditapes_lrc33710	ethanol oxidation	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c10583	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc33710	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc36749	ethanol oxidation	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc36749	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c10583	ethanol oxidation	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc35951	digestion	other biological processes	P	Pepsin A (EC 3.4.23.1)
ruditapes_lrc35951	proteolysis	protein metabolism	P	Pepsin A (EC 3.4.23.1)
ruditapes_c1613	defense response to bacterium	stress response	P	Defensin-B
ruditapes_c1613	innate immune response	stress response	P	Defensin-B
ruditapes_c1613	defense response	stress response	P	Defensin-B
ruditapes_s34927	metabolic process	other metabolic processes	P	Glutathione S-transferase P 1 (EC 2.5.1.18) (BBGSTP1-1) (GST class-pi)
ruditapes_lrc8555	metabolic process	other metabolic processes	P	Glutathione S-transferase P 1 (EC 2.5.1.18) (BBGSTP1-1) (GST class-pi)
ruditapes_c11062	instar larval development	developmental processes	P	Prothoracicostatic peptide (Bom-PTSP)
ruditapes2_c397	regulation of translational initiation by eIF2 alpha phosphorylation	stress response	P	Protein lethal(2)essential for life (Protein Efl21)
ruditapes2_c397	regulation of translational initiation by eIF2 alpha phosphorylation	protein metabolism	P	Protein lethal(2)essential for life (Protein Efl21)
ruditapes2_c397	multicellular organismal development	developmental processes	P	Protein lethal(2)essential for life (Protein Efl21)
ruditapes2_c397	response to stress	stress response	P	Protein lethal(2)essential for life (Protein Efl21)
ruditapes2_c397	protein amino acid lipidation	protein metabolism	P	Protein lethal(2)essential for life (Protein Efl21)
ruditapes2_c397	regulation of autophagy	other metabolic processes	P	Protein lethal(2)essential for life (Protein Efl21)
ruditapes2_c141	metabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes_c38754	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes_c38754	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes2_c141	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes_c38754	cellulose catabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes2_c141	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes_c11836	cellulose catabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes_c38754	metabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes_c11836	metabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes_c11836	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes_c11836	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes2_c141	cellulose catabolic process	other metabolic processes	P	"Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)"
ruditapes_s33186	angiogenesis	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_s33186	chondrocyte differentiation	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes2_c222	chondrocyte differentiation	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_c5394	extracellular matrix organization	cell organization and biogenesis	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes2_c222	angiogenesis	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_s33186	cell adhesion	cell adhesion	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_lrc32336	cell adhesion	cell adhesion	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes2_c3463	chondrocyte differentiation	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_c5394	cell adhesion	cell adhesion	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes2_c3463	angiogenesis	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_c5394	chondrocyte differentiation	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_c5394	angiogenesis	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_lrc32336	angiogenesis	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_lrc32336	chondrocyte differentiation	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_lrc32336	extracellular matrix organization	cell organization and biogenesis	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes2_c222	cell adhesion	cell adhesion	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes2_c3463	cell adhesion	cell adhesion	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes2_c3463	extracellular matrix organization	cell organization and biogenesis	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes2_c222	extracellular matrix organization	cell organization and biogenesis	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_s33186	extracellular matrix organization	cell organization and biogenesis	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3)
ruditapes_c27505	methylation	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c27505	methionine metabolic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c27505	methionine biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c27505	induction by symbiont of host defense response	stress response	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c27505	cellular amino acid biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c27505	cellular response to heat	stress response	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_lrc34977	defense response to fungus	stress response	P	Putative defensin-like protein 235 (Putative S locus cysteine-rich-like protein 26) (Protein SCRL26) (SCR-like protein 26)
ruditapes_lrc34977	killing of cells of another organism	other biological processes	P	Putative defensin-like protein 235 (Putative S locus cysteine-rich-like protein 26) (Protein SCRL26) (SCR-like protein 26)
ruditapes_lrc34977	signal transduction	signal transduction	P	Putative defensin-like protein 235 (Putative S locus cysteine-rich-like protein 26) (Protein SCRL26) (SCR-like protein 26)
ruditapes_lrc34977	defense response	stress response	P	Putative defensin-like protein 235 (Putative S locus cysteine-rich-like protein 26) (Protein SCRL26) (SCR-like protein 26)
ruditapes2_c152	translation	protein metabolism	P	"28S ribosomal protein S10, mitochondrial (MRP-S10) (S10mt)"
ruditapes2_c1863	"DNA damage response, detection of DNA damage"	stress response	P	"28S ribosomal protein S35, mitochondrial (MRP-S35) (S35mt) (28S ribosomal protein S28, mitochondrial) (MRP-S28) (S28mt)"
ruditapes2_c1863	peptide biosynthetic process	other metabolic processes	P	"28S ribosomal protein S35, mitochondrial (MRP-S35) (S35mt) (28S ribosomal protein S28, mitochondrial) (MRP-S28) (S28mt)"
ruditapes_c14652	killing of cells of another organism	other biological processes	P	Defensin-like protein 155 (Low-molecular-weight cysteine-rich protein 36) (Protein LCR36)
ruditapes_c14652	defense response	stress response	P	Defensin-like protein 155 (Low-molecular-weight cysteine-rich protein 36) (Protein LCR36)
ruditapes_c14652	defense response to fungus	stress response	P	Defensin-like protein 155 (Low-molecular-weight cysteine-rich protein 36) (Protein LCR36)
ruditapes_c23200	defense response to fungus	stress response	P	Defensin-like protein 71 (Low-molecular-weight cysteine-rich protein 84) (Protein LCR84)
ruditapes_c23200	killing of cells of another organism	other biological processes	P	Defensin-like protein 71 (Low-molecular-weight cysteine-rich protein 84) (Protein LCR84)
ruditapes_c23200	defense response	stress response	P	Defensin-like protein 71 (Low-molecular-weight cysteine-rich protein 84) (Protein LCR84)
ruditapes2_c1862	translation	protein metabolism	P	"28S ribosomal protein S16, mitochondrial (MRP-S16) (S16mt)"
ruditapes_c20067	translation	protein metabolism	P	"28S ribosomal protein S18b, mitochondrial (MRP-S18-b) (Mrps18-b) (S18mt-b) (28S ribosomal protein S18-2, mitochondrial) (MRP-S18-2)"
ruditapes2_c1022	translation	protein metabolism	P	"28S ribosomal protein S21, mitochondrial (MRP-S21) (S21mt)"
ruditapes2_c251	translation	protein metabolism	P	"28S ribosomal protein S21, mitochondrial (MRP-S21) (S21mt)"
ruditapes_c15133	apoptotic mitochondrial changes	cell organization and biogenesis	P	"28S ribosomal protein S29, mitochondrial (MRP-S29) (S29mt) (Death-associated protein 3) (DAP-3)"
ruditapes_c15133	apoptotic mitochondrial changes	death	P	"28S ribosomal protein S29, mitochondrial (MRP-S29) (S29mt) (Death-associated protein 3) (DAP-3)"
ruditapes_c15133	apoptosis	death	P	"28S ribosomal protein S29, mitochondrial (MRP-S29) (S29mt) (Death-associated protein 3) (DAP-3)"
ruditapes_c11753	translation	protein metabolism	P	"28S ribosomal protein S2, mitochondrial (MRP-S2) (S2mt)"
ruditapes_lrc12549	translation	protein metabolism	P	"28S ribosomal protein S30, mitochondrial (MRP-S30) (S30mt)"
ruditapes2_c287	translation	protein metabolism	P	"28S ribosomal protein S6, mitochondrial (MRP-S6) (S6mt)"
ruditapes_lrc27790	translation	protein metabolism	P	"28S ribosomal protein S6, mitochondrial (MRP-S6) (S6mt)"
ruditapes2_c374	negative regulation of peptidase activity	other biological processes	P	Four-domain proteases inhibitor (McaPI)
ruditapes_c14697	negative regulation of peptidase activity	other biological processes	P	Four-domain proteases inhibitor (McaPI)
ruditapes_c8680	negative regulation of peptidase activity	other biological processes	P	Four-domain proteases inhibitor (McaPI)
ruditapes_c21767	response to stimulus	other biological processes	P	Putative odorant receptor 65a
ruditapes_c21767	signal transduction	signal transduction	P	Putative odorant receptor 65a
ruditapes_c21767	G-protein coupled receptor protein signaling pathway	signal transduction	P	Putative odorant receptor 65a
ruditapes_c21767	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Putative odorant receptor 65a
ruditapes_c21767	sensory perception of smell	other biological processes	P	Putative odorant receptor 65a
ruditapes_c19198	protein amino acid glycosylation	protein metabolism	P	"Alpha-(1,3)-fucosyltransferase C (EC 2.4.1.-) (Galactoside 3-L-fucosyltransferase)"
ruditapes_c16230	phosphorylation	other metabolic processes	P	Putative tyrosine-protein kinase Wsck (EC 2.7.10.1)
ruditapes_c16230	protein amino acid phosphorylation	protein metabolism	P	Putative tyrosine-protein kinase Wsck (EC 2.7.10.1)
ruditapes_c11951	sensory perception of sweet taste	other biological processes	P	Putative gustatory receptor 64f
ruditapes_c11951	sensory perception of taste	other biological processes	P	Putative gustatory receptor 64f
ruditapes_c11951	detection of chemical stimulus involved in sensory perception of taste	other biological processes	P	Putative gustatory receptor 64f
ruditapes_c11951	G-protein coupled receptor protein signaling pathway	signal transduction	P	Putative gustatory receptor 64f
ruditapes_c11951	signal transduction	signal transduction	P	Putative gustatory receptor 64f
ruditapes_c18382	blood coagulation	stress response	P	"Fibrinolytic enzyme, isozyme C (F-II) (EC 3.4.21.-)"
ruditapes_c18382	fibrinolysis	stress response	P	"Fibrinolytic enzyme, isozyme C (F-II) (EC 3.4.21.-)"
ruditapes_c18382	proteolysis	protein metabolism	P	"Fibrinolytic enzyme, isozyme C (F-II) (EC 3.4.21.-)"
ruditapes_c1040	otolith mineralization	developmental processes	P	Otolin-1
ruditapes_c36864	dephosphorylation	other metabolic processes	P	Alkaline phosphatase (AP) (EC 3.1.3.1)
ruditapes_c36864	metabolic process	other metabolic processes	P	Alkaline phosphatase (AP) (EC 3.1.3.1)
ruditapes_c16862	biological_process	other biological processes	P	"39S ribosomal protein L40, mitochondrial (L40mt) (MRP-L40)"
ruditapes_c28683	neuropeptide signaling pathway	signal transduction	P	Vitellogenesis-inhibiting hormone (VIH)
ruditapes_c33083	defense response to bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_s40039	defense response to Gram-negative bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes2_c5261	metabolic process	other metabolic processes	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes2_c5261	cytolysis	death	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_s40039	metabolic process	other metabolic processes	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_c33083	defense response to Gram-negative bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_c35133	cytolysis	death	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_s40039	defense response to Gram-positive bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_c33083	defense response to Gram-positive bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes2_c5261	defense response to bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_c35133	defense response to Gram-negative bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_c35133	metabolic process	other metabolic processes	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_c35133	defense response to bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes2_c5261	defense response to Gram-negative bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes2_c5261	defense response to Gram-positive bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_s40039	cytolysis	death	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_c35133	defense response to Gram-positive bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_c33083	metabolic process	other metabolic processes	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_s40039	defense response to bacterium	stress response	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_c33083	cytolysis	death	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1) (cv-lysozyme 1)"
ruditapes_c20358	chromosome condensation	cell organization and biogenesis	P	DNA protection during starvation protein (EC 1.16.-.-)
ruditapes_c20358	response to stress	stress response	P	DNA protection during starvation protein (EC 1.16.-.-)
ruditapes_c20358	cellular iron ion homeostasis	other biological processes	P	DNA protection during starvation protein (EC 1.16.-.-)
ruditapes_c20358	oxidation reduction	other metabolic processes	P	DNA protection during starvation protein (EC 1.16.-.-)
ruditapes_c32240	retinal ganglion cell axon guidance	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c32240	retinal ganglion cell axon guidance	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c34449	retinal ganglion cell axon guidance	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c34449	retinal ganglion cell axon guidance	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c34961	retinal ganglion cell axon guidance	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c34961	retinal ganglion cell axon guidance	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c39786	optic nerve development	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c6040	translation	protein metabolism	P	60S ribosomal protein L24 (L30)
ruditapes_c34961	ribosomal large subunit assembly	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c34449	G1/S transition checkpoint	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c34961	G1/S transition checkpoint	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c34139	exit from mitosis	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c34139	ribosomal large subunit assembly	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c32582	retina development in camera-type eye	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c39786	retinal ganglion cell axon guidance	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c39786	retinal ganglion cell axon guidance	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c34139	retina development in camera-type eye	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c32240	G1/S transition checkpoint	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c32582	optic nerve development	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c34139	G1/S transition checkpoint	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c32240	optic nerve development	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c39786	retina development in camera-type eye	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c32582	exit from mitosis	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c34961	translation	protein metabolism	P	60S ribosomal protein L24 (L30)
ruditapes_c32582	ribosomal large subunit assembly	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c6040	G1/S transition checkpoint	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c32582	retinal ganglion cell axon guidance	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c32582	retinal ganglion cell axon guidance	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c32240	translation	protein metabolism	P	60S ribosomal protein L24 (L30)
ruditapes_c34139	retinal ganglion cell axon guidance	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c34139	retinal ganglion cell axon guidance	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c34449	translation	protein metabolism	P	60S ribosomal protein L24 (L30)
ruditapes_c39786	exit from mitosis	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c39786	G1/S transition checkpoint	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c6040	retinal ganglion cell axon guidance	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c6040	retinal ganglion cell axon guidance	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c39786	ribosomal large subunit assembly	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c32240	retina development in camera-type eye	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c34961	optic nerve development	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c6040	exit from mitosis	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c34449	retina development in camera-type eye	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c34449	optic nerve development	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c34139	optic nerve development	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c34961	retina development in camera-type eye	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c32240	ribosomal large subunit assembly	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c6040	retina development in camera-type eye	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c34449	ribosomal large subunit assembly	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c34449	exit from mitosis	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c34961	exit from mitosis	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c32582	G1/S transition checkpoint	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c34139	translation	protein metabolism	P	60S ribosomal protein L24 (L30)
ruditapes_c32240	exit from mitosis	cell cycle and proliferation	P	60S ribosomal protein L24 (L30)
ruditapes_c32582	translation	protein metabolism	P	60S ribosomal protein L24 (L30)
ruditapes_c6040	ribosomal large subunit assembly	cell organization and biogenesis	P	60S ribosomal protein L24 (L30)
ruditapes_c39786	translation	protein metabolism	P	60S ribosomal protein L24 (L30)
ruditapes_c6040	optic nerve development	developmental processes	P	60S ribosomal protein L24 (L30)
ruditapes_c27673	ion transport	transport	P	Putative sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter)
ruditapes_c27673	sodium ion transport	transport	P	Putative sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter)
ruditapes_c27673	transport	transport	P	Putative sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter)
ruditapes_c27673	transmembrane transport	transport	P	Putative sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter)
ruditapes_c27673	vitamin transport	transport	P	Putative sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter)
ruditapes_s39632	proteolysis	protein metabolism	P	Serine protease 30 (EC 3.4.21.-) (Distal intestinal serine protease) (Transmembrane serine protease 1) (TMSP-1) (Transmembrane serine protease 8)
ruditapes_s39632	ion transport	transport	P	Serine protease 30 (EC 3.4.21.-) (Distal intestinal serine protease) (Transmembrane serine protease 1) (TMSP-1) (Transmembrane serine protease 8)
ruditapes_s39632	sodium ion transport	transport	P	Serine protease 30 (EC 3.4.21.-) (Distal intestinal serine protease) (Transmembrane serine protease 1) (TMSP-1) (Transmembrane serine protease 8)
ruditapes_s39632	transport	transport	P	Serine protease 30 (EC 3.4.21.-) (Distal intestinal serine protease) (Transmembrane serine protease 1) (TMSP-1) (Transmembrane serine protease 8)
ruditapes_c16255	dorsal appendage formation	cell organization and biogenesis	P	NF-kappa-B inhibitor cactus
ruditapes_c16255	multicellular organismal development	developmental processes	P	NF-kappa-B inhibitor cactus
ruditapes_lrc34608	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_lrc34922	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase)
ruditapes2_lrc4299	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase)
ruditapes_c19811	mitosis	cell cycle and proliferation	P	Thioredoxin-like protein 4A (DIM1 protein homolog) (Spliceosomal U5 snRNP-specific 15 kDa protein) (Thioredoxin-like U5 snRNP protein U5-15kD)
ruditapes_c19811	mitosis	cell organization and biogenesis	P	Thioredoxin-like protein 4A (DIM1 protein homolog) (Spliceosomal U5 snRNP-specific 15 kDa protein) (Thioredoxin-like U5 snRNP protein U5-15kD)
ruditapes_c19811	cell division	other biological processes	P	Thioredoxin-like protein 4A (DIM1 protein homolog) (Spliceosomal U5 snRNP-specific 15 kDa protein) (Thioredoxin-like U5 snRNP protein U5-15kD)
ruditapes_c19811	mRNA processing	RNA metabolism	P	Thioredoxin-like protein 4A (DIM1 protein homolog) (Spliceosomal U5 snRNP-specific 15 kDa protein) (Thioredoxin-like U5 snRNP protein U5-15kD)
ruditapes_c19811	cell cycle	cell cycle and proliferation	P	Thioredoxin-like protein 4A (DIM1 protein homolog) (Spliceosomal U5 snRNP-specific 15 kDa protein) (Thioredoxin-like U5 snRNP protein U5-15kD)
ruditapes_c19811	RNA splicing	RNA metabolism	P	Thioredoxin-like protein 4A (DIM1 protein homolog) (Spliceosomal U5 snRNP-specific 15 kDa protein) (Thioredoxin-like U5 snRNP protein U5-15kD)
ruditapes_s33925	negative regulation of peptidase activity	other biological processes	P	U24-ctenitoxin-Pn1a (U24-CNTX-Pn1a) (Venom protein PN16C3)
ruditapes_c30520	vesicle-mediated transport	transport	P	ADP-ribosylation factor 2
ruditapes_c30520	protein transport	transport	P	ADP-ribosylation factor 2
ruditapes_c30520	transport	transport	P	ADP-ribosylation factor 2
ruditapes2_c1053	transport	transport	P	ADP-ribosylation factor 2
ruditapes2_c1053	protein transport	transport	P	ADP-ribosylation factor 2
ruditapes2_c1053	vesicle-mediated transport	transport	P	ADP-ribosylation factor 2
ruditapes2_c1053	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor 2
ruditapes_c30520	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor 2
ruditapes_c8688	cell cycle	cell cycle and proliferation	P	Enhancer of rudimentary homolog (Mer)
ruditapes2_c361	translation	protein metabolism	P	60S ribosomal protein L19
ruditapes_c10863	RNA splicing	RNA metabolism	P	"Serine/arginine-rich splicing factor 3 (Pre-mRNA-splicing factor SRP20) (Protein X16) (Splicing factor, arginine/serine-rich 3)"
ruditapes_c10863	insulin receptor signaling pathway	signal transduction	P	"Serine/arginine-rich splicing factor 3 (Pre-mRNA-splicing factor SRP20) (Protein X16) (Splicing factor, arginine/serine-rich 3)"
ruditapes_c10863	mRNA processing	RNA metabolism	P	"Serine/arginine-rich splicing factor 3 (Pre-mRNA-splicing factor SRP20) (Protein X16) (Splicing factor, arginine/serine-rich 3)"
ruditapes2_c2401	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Prohibitin
ruditapes2_c2401	histone deacetylation	protein metabolism	P	Prohibitin
ruditapes2_c2401	histone deacetylation	cell organization and biogenesis	P	Prohibitin
ruditapes2_c2401	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Prohibitin
ruditapes2_c2401	negative regulation of cell growth	other biological processes	P	Prohibitin
ruditapes2_c2401	progesterone receptor signaling pathway	signal transduction	P	Prohibitin
ruditapes2_c2401	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Prohibitin
ruditapes2_c2401	negative regulation of cell proliferation	cell cycle and proliferation	P	Prohibitin
ruditapes2_c2401	DNA replication	DNA metabolism	P	Prohibitin
ruditapes2_c2401	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Prohibitin
ruditapes2_c2401	negative regulation of transcription by competitive promoter binding	RNA metabolism	P	Prohibitin
ruditapes2_c4794	translation	protein metabolism	P	40S ribosomal protein S12
ruditapes2_c1178	translation	protein metabolism	P	40S ribosomal protein S12
ruditapes2_c4386	translation	protein metabolism	P	40S ribosomal protein S12
ruditapes2_c4069	translation	protein metabolism	P	40S ribosomal protein S12
ruditapes2_c1713	nucleosome assembly	cell organization and biogenesis	P	Histone H3
ruditapes_c30901	translational elongation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha) (Fragment)
ruditapes_c30901	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha (EF-1-alpha) (Fragment)
ruditapes_c30901	translation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha) (Fragment)
ruditapes_c14279	DNA repair	stress response	P	Virion host shutoff protein (Vhs) (EC 3.1.27.-)
ruditapes_c14279	DNA repair	DNA metabolism	P	Virion host shutoff protein (Vhs) (EC 3.1.27.-)
ruditapes_s36925	DNA replication	DNA metabolism	P	DNA helicase/primase complex protein
ruditapes_s34871	DNA replication	DNA metabolism	P	DNA helicase/primase complex protein
ruditapes_s39849	DNA replication	DNA metabolism	P	Replication origin-binding protein (OBP) (OriBP)
ruditapes_c25229	negative regulation of translation	protein metabolism	P	Ribosome-inactivating protein cucurmosin (EC 3.2.2.22) (rRNA N-glycosidase)
ruditapes_c25229	defense response	stress response	P	Ribosome-inactivating protein cucurmosin (EC 3.2.2.22) (rRNA N-glycosidase)
ruditapes_c13842	maintenance of DNA methylation	DNA metabolism	P	Dicer-like protein 4 (EC 3.1.26.-)
ruditapes_c13842	"RNA interference, production of siRNA"	RNA metabolism	P	Dicer-like protein 4 (EC 3.1.26.-)
ruditapes_c13842	"RNA interference, production of ta-siRNAs"	RNA metabolism	P	Dicer-like protein 4 (EC 3.1.26.-)
ruditapes_c13842	gene silencing by RNA	other metabolic processes	P	Dicer-like protein 4 (EC 3.1.26.-)
ruditapes_c13842	"gene silencing by miRNA, production of miRNAs"	RNA metabolism	P	Dicer-like protein 4 (EC 3.1.26.-)
ruditapes_c13842	defense response	stress response	P	Dicer-like protein 4 (EC 3.1.26.-)
ruditapes_c13842	vegetative phase change	developmental processes	P	Dicer-like protein 4 (EC 3.1.26.-)
ruditapes_c13842	"RNA interference, production of lsiRNA"	RNA metabolism	P	Dicer-like protein 4 (EC 3.1.26.-)
ruditapes_c13842	defense response to virus	stress response	P	Dicer-like protein 4 (EC 3.1.26.-)
ruditapes_c13842	RNA processing	RNA metabolism	P	Dicer-like protein 4 (EC 3.1.26.-)
ruditapes2_c5788	killing of cells of another organism	other biological processes	P	Putative fungistatic metabolite
ruditapes2_c565	defense response to fungus	stress response	P	Putative fungistatic metabolite
ruditapes_lrc33491	killing of cells of another organism	other biological processes	P	Putative fungistatic metabolite
ruditapes_lrc34358	killing of cells of another organism	other biological processes	P	Putative fungistatic metabolite
ruditapes2_c5788	defense response to fungus	stress response	P	Putative fungistatic metabolite
ruditapes_lrc33491	defense response to fungus	stress response	P	Putative fungistatic metabolite
ruditapes_c3245	defense response to fungus	stress response	P	Putative fungistatic metabolite
ruditapes2_c565	killing of cells of another organism	other biological processes	P	Putative fungistatic metabolite
ruditapes_lrc34358	defense response to fungus	stress response	P	Putative fungistatic metabolite
ruditapes_c3245	killing of cells of another organism	other biological processes	P	Putative fungistatic metabolite
ruditapes_lrc27117	defense response to fungus	stress response	P	Putative fungistatic metabolite
ruditapes_lrc27117	killing of cells of another organism	other biological processes	P	Putative fungistatic metabolite
ruditapes_c20256	oxidation reduction	other metabolic processes	P	Peroxidase A (EC 1.11.1.7) (Fragments)
ruditapes_c20256	response to oxidative stress	stress response	P	Peroxidase A (EC 1.11.1.7) (Fragments)
ruditapes_c20256	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidase A (EC 1.11.1.7) (Fragments)
ruditapes_c20256	hydrogen peroxide catabolic process	stress response	P	Peroxidase A (EC 1.11.1.7) (Fragments)
ruditapes_c28330	protein-chromophore linkage	protein metabolism	P	"Chlorophyll a-b binding protein 1, chloroplastic (LHCII type I CAB-1) (LHCP) (Fragments)"
ruditapes_c28330	photosynthesis	other metabolic processes	P	"Chlorophyll a-b binding protein 1, chloroplastic (LHCII type I CAB-1) (LHCP) (Fragments)"
ruditapes_c3939	defense response	stress response	P	Defensin-1 (American oyster defensin) (AOD)
ruditapes_c3939	innate immune response	stress response	P	Defensin-1 (American oyster defensin) (AOD)
ruditapes_c3939	defense response to Gram-positive bacterium	stress response	P	Defensin-1 (American oyster defensin) (AOD)
ruditapes_c3939	defense response to Gram-negative bacterium	stress response	P	Defensin-1 (American oyster defensin) (AOD)
ruditapes_c3939	defense response to bacterium	stress response	P	Defensin-1 (American oyster defensin) (AOD)
ruditapes_c6496	protein polymerization	cell organization and biogenesis	P	Tubulin beta-2A chain
ruditapes_c6496	microtubule-based movement	other biological processes	P	Tubulin beta-2A chain
ruditapes_c6496	GTP catabolic process	other metabolic processes	P	Tubulin beta-2A chain
ruditapes_c6496	microtubule-based process	other biological processes	P	Tubulin beta-2A chain
ruditapes2_c136	cellular iron ion homeostasis	other biological processes	P	"Ferritin, heavy subunit (Ferritin H) (EC 1.16.3.1)"
ruditapes2_c136	iron ion transport	transport	P	"Ferritin, heavy subunit (Ferritin H) (EC 1.16.3.1)"
ruditapes2_c136	oxidation reduction	other metabolic processes	P	"Ferritin, heavy subunit (Ferritin H) (EC 1.16.3.1)"
ruditapes_c20132	regulation of actin filament polymerization	protein metabolism	P	Actin-related protein 2/3 complex subunit 2 (Arp2/3 complex 34 kDa subunit) (p34-ARC)
ruditapes_c20132	regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 2 (Arp2/3 complex 34 kDa subunit) (p34-ARC)
ruditapes_c20132	positive regulation of actin filament polymerization	protein metabolism	P	Actin-related protein 2/3 complex subunit 2 (Arp2/3 complex 34 kDa subunit) (p34-ARC)
ruditapes_c20132	positive regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 2 (Arp2/3 complex 34 kDa subunit) (p34-ARC)
ruditapes_c5875	transport	transport	P	Anoctamin-9 (Transmembrane protein 16J)
ruditapes_c5875	chloride transport	transport	P	Anoctamin-9 (Transmembrane protein 16J)
ruditapes_c5875	ion transport	transport	P	Anoctamin-9 (Transmembrane protein 16J)
ruditapes_c5875	biological_process	other biological processes	P	Anoctamin-9 (Transmembrane protein 16J)
ruditapes_c23563	oxidation reduction	other metabolic processes	P	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha) (Fragments)"
ruditapes_c23563	tricarboxylic acid cycle	other metabolic processes	P	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha) (Fragments)"
ruditapes_c12560	electron transport chain	other metabolic processes	P	Cytochrome c2
ruditapes_c12560	photosynthesis	other metabolic processes	P	Cytochrome c2
ruditapes_c12560	transport	transport	P	Cytochrome c2
ruditapes_lrc35033	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc4771	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s37512	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc34412	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s36819	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc33934	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s36177	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc33615	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc39392	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35361	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s36177	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc6073	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c7181	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c20791	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36372	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36504	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc33609	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s32410	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc4884	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35741	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s40388	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36056	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc33615	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc33934	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc4884	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s36819	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c3642	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc3953	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc34412	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35060	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35476	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c25301	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc4771	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36504	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc6472	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc6894	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc6894	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc33609	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc4049	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s37692	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc37298	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36056	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc37298	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c7181	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c20791	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc3953	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc32888	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c5899	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc39392	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35361	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc4049	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc32888	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc33615	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s36819	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c20791	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35741	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc6472	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc37298	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c25301	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc34968	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c25301	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35033	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c7181	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc6894	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc4049	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c3642	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc39392	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc32888	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36056	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc6472	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35060	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36109	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s37692	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s37512	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35361	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35033	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s37512	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s40388	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35537	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35476	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c5899	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc6073	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc34968	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36109	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35537	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s32410	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc33609	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc3953	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc6073	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s40388	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s32410	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s36177	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36504	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc4771	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36372	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c5899	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35060	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35537	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35741	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36109	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_s37692	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc36372	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc33934	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc34968	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c3642	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_lrc4884	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc34412	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_lrc35476	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c7713	biological_process	other biological processes	P	Tripartite motif-containing protein 43B
ruditapes_c27273	negative regulation of peptidase activity	other biological processes	P	Trypsin inhibitor (EcTI) [Cleaved into: Trypsin inhibitor alpha chain; Trypsin inhibitor beta chain]
ruditapes_c27273	negative regulation of endopeptidase activity	other biological processes	P	Trypsin inhibitor (EcTI) [Cleaved into: Trypsin inhibitor alpha chain; Trypsin inhibitor beta chain]
ruditapes2_c54	cell-matrix adhesion	cell adhesion	P	Ependymin-related protein 2
ruditapes_c2955	cell-matrix adhesion	cell adhesion	P	Ependymin-related protein 2
ruditapes_c27738	negative regulation of peptidase activity	other biological processes	P	BPTI/Kunitz domain-containing protein (Fragment)
ruditapes_c6980	negative regulation of peptidase activity	other biological processes	P	BPTI/Kunitz domain-containing protein (Fragment)
ruditapes_c9156	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase 1 (EC 1.1.1.1) (Alcohol dehydrogenase I)
ruditapes_c10744	carbohydrate metabolic process	other metabolic processes	P	Putative beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (Chitobiase) (N-acetyl-beta-glucosaminidase)
ruditapes_s40273	cell wall organization	cell organization and biogenesis	P	Beta-glucan synthesis-associated protein KRE6
ruditapes_c19209	ubiquitin-dependent protein catabolic process	protein metabolism	P	WD repeat-containing protein pop1 (WD repeat-containing protein ste16)
ruditapes_c19209	cyclin catabolic process	protein metabolism	P	WD repeat-containing protein pop1 (WD repeat-containing protein ste16)
ruditapes_c19209	cellular response to nitrogen starvation	stress response	P	WD repeat-containing protein pop1 (WD repeat-containing protein ste16)
ruditapes_c19209	conjugation with cellular fusion	other biological processes	P	WD repeat-containing protein pop1 (WD repeat-containing protein ste16)
ruditapes_c19209	regulation of mitotic cell cycle	cell cycle and proliferation	P	WD repeat-containing protein pop1 (WD repeat-containing protein ste16)
ruditapes_c26252	transport	transport	P	"Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase)"
ruditapes_c26252	NADH oxidation	other metabolic processes	P	"Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase)"
ruditapes_c26252	oxidation reduction	other metabolic processes	P	"Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase)"
ruditapes_c26252	electron transport chain	other metabolic processes	P	"Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase)"
ruditapes_c28186	cellular response to stress	stress response	P	Uncharacterized protein C57A7.05
ruditapes_c15415	DNA replication initiation	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c30449	telomere maintenance	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c30449	telomere maintenance	cell organization and biogenesis	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c30449	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c30449	DNA replication	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c15415	DNA replication	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c15415	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c15415	telomere maintenance	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c15415	telomere maintenance	cell organization and biogenesis	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c15415	cell cycle checkpoint	cell cycle and proliferation	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c30449	regulation of S phase of mitotic cell cycle	cell cycle and proliferation	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c30449	DNA replication initiation	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c15415	regulation of S phase of mitotic cell cycle	cell cycle and proliferation	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c30449	cell cycle checkpoint	cell cycle and proliferation	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes2_c628	sporulation resulting in formation of a cellular spore	other biological processes	P	Alkaline protease 2 (ALP2) (EC 3.4.21.63) (Autophagic serine protease alp2) (allergen Asp f 18)
ruditapes2_c628	pathogenesis	other biological processes	P	Alkaline protease 2 (ALP2) (EC 3.4.21.63) (Autophagic serine protease alp2) (allergen Asp f 18)
ruditapes2_c628	negative regulation of catalytic activity	other biological processes	P	Alkaline protease 2 (ALP2) (EC 3.4.21.63) (Autophagic serine protease alp2) (allergen Asp f 18)
ruditapes2_c628	proteolysis	protein metabolism	P	Alkaline protease 2 (ALP2) (EC 3.4.21.63) (Autophagic serine protease alp2) (allergen Asp f 18)
ruditapes2_c3998	translation	protein metabolism	P	Heat shock protein SSB1
ruditapes2_c3998	response to stress	stress response	P	Heat shock protein SSB1
ruditapes_c21326	cellular response to stress	stress response	P	Uncharacterized UPF0442 protein C16A10.01
ruditapes_c9645	ATP synthesis coupled proton transport	transport	P	"Putative ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c9645	ATP synthesis coupled proton transport	other metabolic processes	P	"Putative ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c9645	transport	transport	P	"Putative ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c9645	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c9645	proton transport	transport	P	"Putative ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c9645	mitochondrial ATP synthesis coupled proton transport	transport	P	"Putative ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c9645	mitochondrial ATP synthesis coupled proton transport	other metabolic processes	P	"Putative ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c9645	ion transport	transport	P	"Putative ATP synthase subunit epsilon, mitochondrial (ATPase subunit epsilon)"
ruditapes_c9196	multicellular organismal development	developmental processes	P	Protein Wnt-2b-A (Wnt-2b) (XWnt-2b) (XWnt-2)
ruditapes_c9196	Wnt receptor signaling pathway	signal transduction	P	Protein Wnt-2b-A (Wnt-2b) (XWnt-2b) (XWnt-2)
ruditapes_c12584	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit) (Fragment)
ruditapes_c12584	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit) (Fragment)
ruditapes_c12584	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit) (Fragment)
ruditapes2_c2424	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c2424	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c2424	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c2424	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c2424	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_c3244	RNA biosynthetic process	RNA metabolism	P	Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase) [Cleaved into: Replicase small subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 3.6.4.13) (126 kDa protein) (Methyltransferase/RNA helicase) (MT/HEL)]
ruditapes_c3244	RNA processing	RNA metabolism	P	Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase) [Cleaved into: Replicase small subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 3.6.4.13) (126 kDa protein) (Methyltransferase/RNA helicase) (MT/HEL)]
ruditapes_c3244	"transcription, DNA-dependent"	RNA metabolism	P	Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase) [Cleaved into: Replicase small subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 3.6.4.13) (126 kDa protein) (Methyltransferase/RNA helicase) (MT/HEL)]
ruditapes_c3244	mRNA methylation	RNA metabolism	P	Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase) [Cleaved into: Replicase small subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 3.6.4.13) (126 kDa protein) (Methyltransferase/RNA helicase) (MT/HEL)]
ruditapes_c3244	viral genome replication	other biological processes	P	Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase) [Cleaved into: Replicase small subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 3.6.4.13) (126 kDa protein) (Methyltransferase/RNA helicase) (MT/HEL)]
ruditapes2_c1253	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes2_c1253	proteolysis	protein metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes2_c1253	viral genome replication	other biological processes	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes2_c1253	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes2_c1253	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_lrc10617	ATP catabolic process	other metabolic processes	P	Probable cation-transporting ATPase C10C6.6 (EC 3.6.3.-)
ruditapes_c30050	ATP catabolic process	other metabolic processes	P	Probable cation-transporting ATPase C10C6.6 (EC 3.6.3.-)
ruditapes_lrc10617	cation transport	transport	P	Probable cation-transporting ATPase C10C6.6 (EC 3.6.3.-)
ruditapes_c30050	cation transport	transport	P	Probable cation-transporting ATPase C10C6.6 (EC 3.6.3.-)
ruditapes_lrc38506	growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc38506	hermaphrodite genitalia development	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_s36448	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc35200	nematode larval development	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc35200	embryonic development ending in birth or egg hatching	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_s36448	growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc38506	determination of adult life span	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc35200	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc35200	determination of adult life span	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc38506	positive regulation of growth rate	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc35200	reproduction	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc35200	growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc35200	hermaphrodite genitalia development	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_s36448	determination of adult life span	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc35200	positive regulation of growth rate	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc38506	reproduction	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_s36448	embryonic development ending in birth or egg hatching	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc38506	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_s36448	positive regulation of growth rate	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc38506	embryonic development ending in birth or egg hatching	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_s36448	reproduction	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_s36448	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_s36448	hermaphrodite genitalia development	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc38506	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc35200	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_s36448	nematode larval development	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_lrc38506	nematode larval development	developmental processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ruditapes_c15376	meiosis	cell cycle and proliferation	P	Intermediate filament protein ifa-1 (Cel IF A1) (Intermediate filament protein A1) (IF-A1)
ruditapes_c15376	embryonic development ending in birth or egg hatching	developmental processes	P	Intermediate filament protein ifa-1 (Cel IF A1) (Intermediate filament protein A1) (IF-A1)
ruditapes_c15376	growth	other biological processes	P	Intermediate filament protein ifa-1 (Cel IF A1) (Intermediate filament protein A1) (IF-A1)
ruditapes_c15376	nematode larval development	developmental processes	P	Intermediate filament protein ifa-1 (Cel IF A1) (Intermediate filament protein A1) (IF-A1)
ruditapes_c15376	positive regulation of growth rate	other biological processes	P	Intermediate filament protein ifa-1 (Cel IF A1) (Intermediate filament protein A1) (IF-A1)
ruditapes_s40122	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s39375	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s39905	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc6279	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s37522	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s37312	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc33232	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc5687	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s36356	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s39736	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s38650	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc4078	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_c5489	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc36686	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc36967	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc25803	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc34781	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc37610	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s39258	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc33411	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s40025	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s39696	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_c3511	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s37597	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s40271	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc3543	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_lrc36918	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc1883	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_c555	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc7416	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s37591	biological_process	other biological processes	P	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s40054	biological_process	other biological processes	P	Probable glutathione S-transferase 8 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s35034	biological_process	other biological processes	P	Probable glutathione S-transferase 8 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_c1659	biological_process	other biological processes	P	Probable glutathione S-transferase 8 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_c2337	peptide metabolic process	other metabolic processes	P	Probable peptidyl-alpha-hydroxyglycine alpha-amidating lyase F21F3.1 (EC 4.3.2.5) (Probable peptidylamidoglycolate lyase) (PAL)
ruditapes2_c2337	oxidation reduction	other metabolic processes	P	Probable peptidyl-alpha-hydroxyglycine alpha-amidating lyase F21F3.1 (EC 4.3.2.5) (Probable peptidylamidoglycolate lyase) (PAL)
ruditapes_c13282	"transcription, DNA-dependent"	RNA metabolism	P	Probable DNA-directed RNA polymerase III subunit RPC6 (RNA polymerase III subunit C6) (DNA-directed RNA polymerase III subunit F)
ruditapes_c13282	reproduction	other biological processes	P	Probable DNA-directed RNA polymerase III subunit RPC6 (RNA polymerase III subunit C6) (DNA-directed RNA polymerase III subunit F)
ruditapes2_c1271	locomotion	other biological processes	P	Warthog protein 6 [Cleaved into: Warthog protein 6 N-product; Warthog protein 6 C-product]
ruditapes2_c1271	proteolysis	protein metabolism	P	Warthog protein 6 [Cleaved into: Warthog protein 6 N-product; Warthog protein 6 C-product]
ruditapes2_c1271	multicellular organismal development	developmental processes	P	Warthog protein 6 [Cleaved into: Warthog protein 6 N-product; Warthog protein 6 C-product]
ruditapes2_c1271	intein-mediated protein splicing	protein metabolism	P	Warthog protein 6 [Cleaved into: Warthog protein 6 N-product; Warthog protein 6 C-product]
ruditapes2_c1271	positive regulation of multicellular organism growth	other biological processes	P	Warthog protein 6 [Cleaved into: Warthog protein 6 N-product; Warthog protein 6 C-product]
ruditapes2_c1271	"molting cycle, collagen and cuticulin-based cuticle"	other biological processes	P	Warthog protein 6 [Cleaved into: Warthog protein 6 N-product; Warthog protein 6 C-product]
ruditapes2_c1271	cell communication	other biological processes	P	Warthog protein 6 [Cleaved into: Warthog protein 6 N-product; Warthog protein 6 C-product]
ruditapes_c616	signal transduction	signal transduction	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes_c616	peptidyl-histidine phosphorylation	protein metabolism	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes2_c211	glucose metabolic process	other metabolic processes	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes2_c211	carbohydrate metabolic process	other metabolic processes	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes_c616	carbohydrate metabolic process	other metabolic processes	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes_c616	two-component signal transduction system (phosphorelay)	signal transduction	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes2_c211	signal transduction	signal transduction	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes2_c211	two-component signal transduction system (phosphorelay)	signal transduction	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes2_c211	peptidyl-histidine phosphorylation	protein metabolism	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes2_c211	phosphorylation	other metabolic processes	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes_c616	phosphorylation	other metabolic processes	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes_c616	glucose metabolic process	other metabolic processes	P	"[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (DmPDK) (Pyruvate dehydrogenase kinase) (EC 2.7.11.2)"
ruditapes_c22231	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Voltage-dependent calcium channel type A subunit alpha-1 (Protein cacophony) (Protein nightblind A) (Protein no-on-transient B) (Dmca1A)
ruditapes_c22231	transmembrane transport	transport	P	Voltage-dependent calcium channel type A subunit alpha-1 (Protein cacophony) (Protein nightblind A) (Protein no-on-transient B) (Dmca1A)
ruditapes_c22231	calcium ion transport	transport	P	Voltage-dependent calcium channel type A subunit alpha-1 (Protein cacophony) (Protein nightblind A) (Protein no-on-transient B) (Dmca1A)
ruditapes_c22231	multicellular organismal development	developmental processes	P	Voltage-dependent calcium channel type A subunit alpha-1 (Protein cacophony) (Protein nightblind A) (Protein no-on-transient B) (Dmca1A)
ruditapes_c22231	transmembrane calcium ion transport	transport	P	Voltage-dependent calcium channel type A subunit alpha-1 (Protein cacophony) (Protein nightblind A) (Protein no-on-transient B) (Dmca1A)
ruditapes_c22231	regulation of transmembrane ion transport	transport	P	Voltage-dependent calcium channel type A subunit alpha-1 (Protein cacophony) (Protein nightblind A) (Protein no-on-transient B) (Dmca1A)
ruditapes_c22231	transport	transport	P	Voltage-dependent calcium channel type A subunit alpha-1 (Protein cacophony) (Protein nightblind A) (Protein no-on-transient B) (Dmca1A)
ruditapes_c22231	ion transport	transport	P	Voltage-dependent calcium channel type A subunit alpha-1 (Protein cacophony) (Protein nightblind A) (Protein no-on-transient B) (Dmca1A)
ruditapes_c26814	transmembrane transport	transport	P	Probable multidrug resistance-associated protein lethal(2)03659 (Wunen region A protein)
ruditapes_c26814	ATP catabolic process	other metabolic processes	P	Probable multidrug resistance-associated protein lethal(2)03659 (Wunen region A protein)
ruditapes_c26814	multicellular organismal development	developmental processes	P	Probable multidrug resistance-associated protein lethal(2)03659 (Wunen region A protein)
ruditapes_c26814	transport	transport	P	Probable multidrug resistance-associated protein lethal(2)03659 (Wunen region A protein)
ruditapes_lrc32414	signal transduction	signal transduction	P	Metabotropic glutamate receptor (DmGluRA)
ruditapes_lrc32414	neuromuscular junction development	developmental processes	P	Metabotropic glutamate receptor (DmGluRA)
ruditapes_lrc32414	neuromuscular junction development	cell organization and biogenesis	P	Metabotropic glutamate receptor (DmGluRA)
ruditapes_lrc32414	G-protein coupled receptor protein signaling pathway	signal transduction	P	Metabotropic glutamate receptor (DmGluRA)
ruditapes_lrc32414	"regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	Metabotropic glutamate receptor (DmGluRA)
ruditapes_c11557	mitosis	cell cycle and proliferation	P	Mitotic apparatus protein p62
ruditapes_c11557	mitosis	cell organization and biogenesis	P	Mitotic apparatus protein p62
ruditapes_c11557	cell cycle	cell cycle and proliferation	P	Mitotic apparatus protein p62
ruditapes_c11557	cell division	other biological processes	P	Mitotic apparatus protein p62
ruditapes_c7688	carbohydrate metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c23294	metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c23294	carbohydrate metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c7688	metabolic process	other metabolic processes	P	"Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_lrc5201	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc25599	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_s39730	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_lrc5818	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_lrc5201	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_lrc5272	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c3796	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc32387	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_lrc5818	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_lrc5272	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc25599	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc37331	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_s39730	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc31823	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc28875	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc32387	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc37331	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc28875	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc31823	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_lrc5221	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc34723	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc34723	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_lrc5221	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes2_c3796	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_c19850	protein transport	transport	P	ADP-ribosylation factor
ruditapes_c19850	vesicle-mediated transport	transport	P	ADP-ribosylation factor
ruditapes_c19850	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor
ruditapes_c19850	transport	transport	P	ADP-ribosylation factor
ruditapes_c22167	biological_process	other biological processes	P	Putative mitochondrial inner membrane protein
ruditapes2_c2693	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial (Complex I-42kD) (CI-42kD) (NADH-ubiquinone oxidoreductase 42 kDa subunit)"
ruditapes2_c2693	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial (Complex I-42kD) (CI-42kD) (NADH-ubiquinone oxidoreductase 42 kDa subunit)"
ruditapes2_c2693	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial (Complex I-42kD) (CI-42kD) (NADH-ubiquinone oxidoreductase 42 kDa subunit)"
ruditapes_c26479	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Negative elongation factor E
ruditapes_c26479	"transcription, DNA-dependent"	RNA metabolism	P	Negative elongation factor E
ruditapes_c26479	negative regulation of RNA elongation	RNA metabolism	P	Negative elongation factor E
ruditapes_c26479	RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Negative elongation factor E
ruditapes_c26479	"negative regulation of transcription from RNA polymerase II promoter, mitotic"	cell cycle and proliferation	P	Negative elongation factor E
ruditapes_c26479	"negative regulation of transcription from RNA polymerase II promoter, mitotic"	RNA metabolism	P	Negative elongation factor E
ruditapes_c26479	"negative regulation of transcription from RNA polymerase II promoter, mitotic"	cell organization and biogenesis	P	Negative elongation factor E
ruditapes_c4040	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c4040	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c4314	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c4314	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c4314	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c4040	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c10433	ion transport	transport	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c10433	ATP biosynthetic process	other metabolic processes	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c10433	transport	transport	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c10433	proton transport	transport	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c10433	ATP synthesis coupled proton transport	transport	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c10433	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes2_c2662	transport	transport	P	Cytochrome c type-2
ruditapes2_c2662	electron transport chain	other metabolic processes	P	Cytochrome c type-2
ruditapes_c18092	ATP synthesis coupled proton transport	transport	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c18092	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c18092	proton transport	transport	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c18092	transport	transport	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c18092	ATP biosynthetic process	other metabolic processes	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c18092	ion transport	transport	P	ATP synthase protein 8 (A6L) (F-ATPase subunit 8)
ruditapes_c9730	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) (Fragment)
ruditapes_c9730	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) (Fragment)
ruditapes_c9730	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) (Fragment)
ruditapes_c9730	transport	transport	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4) (Fragment)
ruditapes_c10517	defense response	stress response	P	Protein MLO
ruditapes_c10517	cell death	death	P	Protein MLO
ruditapes_c10517	response to biotic stimulus	other biological processes	P	Protein MLO
ruditapes_c15203	oxygen transport	transport	P	Leghemoglobin 29 (VfLb29)
ruditapes_c15203	transport	transport	P	Leghemoglobin 29 (VfLb29)
ruditapes_c15203	nitrogen fixation	other metabolic processes	P	Leghemoglobin 29 (VfLb29)
ruditapes_c28337	oxidation reduction	other metabolic processes	P	Thioredoxin reductase (TRXR) (EC 1.8.1.9)
ruditapes_c28337	removal of superoxide radicals	other metabolic processes	P	Thioredoxin reductase (TRXR) (EC 1.8.1.9)
ruditapes_lrc34177	proteolysis	protein metabolism	P	Putative membrane metalloprotease YxkI (EC 3.4.24.-)
ruditapes_s39041	proteolysis	protein metabolism	P	Putative membrane metalloprotease YxkI (EC 3.4.24.-)
ruditapes2_lrc4302	proteolysis	protein metabolism	P	Putative membrane metalloprotease YxkI (EC 3.4.24.-)
ruditapes2_lrc7362	proteolysis	protein metabolism	P	Putative membrane metalloprotease YxkI (EC 3.4.24.-)
ruditapes_lrc35985	proteolysis	protein metabolism	P	Putative membrane metalloprotease YxkI (EC 3.4.24.-)
ruditapes_lrc33865	proteolysis	protein metabolism	P	Putative membrane metalloprotease YxkI (EC 3.4.24.-)
ruditapes2_lrc4807	proteolysis	protein metabolism	P	Putative membrane metalloprotease YxkI (EC 3.4.24.-)
ruditapes_c9733	transmembrane transport	transport	P	Uncharacterized transporter YcgH
ruditapes_c9733	amino acid transport	transport	P	Uncharacterized transporter YcgH
ruditapes_c9733	transport	transport	P	Uncharacterized transporter YcgH
ruditapes_c31242	L-arabinose catabolic process	other metabolic processes	P	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) (Phosphoribulose isomerase)
ruditapes_c31242	arabinose catabolic process	other metabolic processes	P	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) (Phosphoribulose isomerase)
ruditapes_c31242	carbohydrate metabolic process	other metabolic processes	P	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) (Phosphoribulose isomerase)
ruditapes_c23760	L-arabinose metabolic process	other metabolic processes	P	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase 1 (ABF) (EC 3.2.1.55) (Intracellular arabinan exo-alpha-(1->5)-L-arabinosidase) (Arabinosidase)
ruditapes_c23760	carbohydrate metabolic process	other metabolic processes	P	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase 1 (ABF) (EC 3.2.1.55) (Intracellular arabinan exo-alpha-(1->5)-L-arabinosidase) (Arabinosidase)
ruditapes_c23760	metabolic process	other metabolic processes	P	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase 1 (ABF) (EC 3.2.1.55) (Intracellular arabinan exo-alpha-(1->5)-L-arabinosidase) (Arabinosidase)
ruditapes_c7655	cell wall organization	cell organization and biogenesis	P	Glutamate racemase 1 (EC 5.1.1.3)
ruditapes_c7655	metabolic process	other metabolic processes	P	Glutamate racemase 1 (EC 5.1.1.3)
ruditapes_c7655	peptidoglycan biosynthetic process	other metabolic processes	P	Glutamate racemase 1 (EC 5.1.1.3)
ruditapes_c7655	regulation of cell shape	cell organization and biogenesis	P	Glutamate racemase 1 (EC 5.1.1.3)
ruditapes_c3657	metabolic process	other metabolic processes	P	Beta-galactosidase BgaH (Beta-gal) (EC 3.2.1.23)
ruditapes_c3657	carbohydrate metabolic process	other metabolic processes	P	Beta-galactosidase BgaH (Beta-gal) (EC 3.2.1.23)
ruditapes_c20017	metabolic process	other metabolic processes	P	Putative mycofactocin radical SAM maturase MftC (EC 2.-.-.-)
ruditapes_c25908	pathogenesis	other biological processes	P	Phospholipase C 3 (EC 3.1.4.3)
ruditapes_c12816	carbohydrate metabolic process	other metabolic processes	P	Malto-oligosyltrehalose trehalohydrolase (MTHase) (EC 3.2.1.141) (4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase) (Maltooligosyl trehalose trehalohydrolase)
ruditapes_c12816	metabolic process	other metabolic processes	P	Malto-oligosyltrehalose trehalohydrolase (MTHase) (EC 3.2.1.141) (4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase) (Maltooligosyl trehalose trehalohydrolase)
ruditapes_c12816	trehalose biosynthetic process	other metabolic processes	P	Malto-oligosyltrehalose trehalohydrolase (MTHase) (EC 3.2.1.141) (4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase) (Maltooligosyl trehalose trehalohydrolase)
ruditapes_c28392	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c28392	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c28392	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c28392	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c28392	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c29893	pathogenesis	other biological processes	P	Pesticidal crystal protein cry1Af (Crystaline entomocidal protoxin) (Insecticidal delta-endotoxin CryIA(f)) (Fragment)
ruditapes_c29893	sporulation resulting in formation of a cellular spore	other biological processes	P	Pesticidal crystal protein cry1Af (Crystaline entomocidal protoxin) (Insecticidal delta-endotoxin CryIA(f)) (Fragment)
ruditapes_c29893	defense response	stress response	P	Pesticidal crystal protein cry1Af (Crystaline entomocidal protoxin) (Insecticidal delta-endotoxin CryIA(f)) (Fragment)
ruditapes_c22066	biosynthetic process	other metabolic processes	P	Uncharacterized HTH-type transcriptional regulator YdeF
ruditapes_c22066	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YdeF
ruditapes_c22066	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YdeF
ruditapes_lrc33711	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YdgC
ruditapes_lrc33711	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized HTH-type transcriptional regulator YdgC
ruditapes_lrc38663	regulation of gene expression	other metabolic processes	P	HTH-type transcriptional repressor KstR2
ruditapes_lrc38663	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional repressor KstR2
ruditapes_lrc38663	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional repressor KstR2
ruditapes_lrc38663	regulation of fatty acid metabolic process	other metabolic processes	P	HTH-type transcriptional repressor KstR2
ruditapes_c38062	cell adhesion	cell adhesion	P	Cadherin-6 (Kidney cadherin) (K-cadherin)
ruditapes_c38062	homophilic cell adhesion	cell adhesion	P	Cadherin-6 (Kidney cadherin) (K-cadherin)
ruditapes_c28093	rRNA processing	RNA metabolism	P	Protein FRG1 (FSHD region gene 1 protein)
ruditapes_c28093	ribosome biogenesis	other biological processes	P	Protein FRG1 (FSHD region gene 1 protein)
ruditapes_c28093	mRNA processing	RNA metabolism	P	Protein FRG1 (FSHD region gene 1 protein)
ruditapes_c28093	RNA splicing	RNA metabolism	P	Protein FRG1 (FSHD region gene 1 protein)
ruditapes_lrc39471	DNA repair	stress response	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_lrc39471	DNA repair	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_lrc39471	cell division	other biological processes	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_lrc39471	DNA ligation during DNA repair	stress response	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_lrc39471	DNA ligation during DNA repair	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_lrc39471	cell cycle	cell cycle and proliferation	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_lrc39471	DNA recombination	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_lrc39471	response to DNA damage stimulus	stress response	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_lrc39471	DNA replication	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_lrc39471	DNA ligation	DNA metabolism	P	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)
ruditapes_c19103	lipid catabolic process	other metabolic processes	P	Eosinophil lysophospholipase (EC 3.1.1.5) (Charcot-Leyden crystal protein homolog) (CLC) (Galectin-10) (Gal-10) (Lysolecithin acylhydrolase) (Fragment)
ruditapes_c20938	phospholipid homeostasis	other biological processes	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	protein transport	transport	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	defense response to protozoan	stress response	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	neutrophil mediated immunity	other biological processes	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	transport	transport	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	phospholipid metabolic process	other metabolic processes	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	blood coagulation	stress response	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	response to drug	other biological processes	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	leukocyte chemotaxis	other biological processes	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	defense response to virus	stress response	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	positive regulation of natural killer cell activation	other biological processes	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	melanosome organization	cell organization and biogenesis	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	lysosome organization	cell organization and biogenesis	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	pigment granule organization	cell organization and biogenesis	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	defense response to bacterium	stress response	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	secretion of lysosomal enzymes	transport	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	mast cell secretory granule organization	cell organization and biogenesis	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	microtubule-based process	other biological processes	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	T cell mediated immunity	other biological processes	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c20938	pigmentation	other biological processes	P	Lysosomal-trafficking regulator (Beige protein) (CHS1 homolog)
ruditapes_c14852	negative regulation of osteoblast differentiation	developmental processes	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c27141	regulation of bone mineralization	developmental processes	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c27141	macroautophagy	stress response	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c27141	regulation of stress-activated MAPK cascade	stress response	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c14852	macroautophagy	stress response	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c14852	macroautophagy	other metabolic processes	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c14852	regulation of stress-activated MAPK cascade	signal transduction	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c14852	regulation of stress-activated MAPK cascade	stress response	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c14852	regulation of bone mineralization	developmental processes	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c27141	regulation of stress-activated MAPK cascade	signal transduction	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c27141	macroautophagy	other metabolic processes	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c27141	protein oligomerization	cell organization and biogenesis	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c14852	protein oligomerization	cell organization and biogenesis	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c27141	negative regulation of osteoblast differentiation	developmental processes	P	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)
ruditapes_c27506	proteolysis	protein metabolism	P	Enteropeptidase (EC 3.4.21.9) (Enterokinase) (Serine protease 7) (Transmembrane protease serine 15) [Cleaved into: Enteropeptidase non-catalytic heavy chain; Enteropeptidase catalytic light chain]
ruditapes2_c2248	ion transport	transport	P	Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3)
ruditapes2_c2248	sequestering of zinc ion	other biological processes	P	Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3)
ruditapes2_c2248	transmembrane transport	transport	P	Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3)
ruditapes2_c2248	positive regulation of transport	transport	P	Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3)
ruditapes2_c2248	transport	transport	P	Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3)
ruditapes2_c2248	zinc ion transport	transport	P	Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3)
ruditapes2_c2248	cation transport	transport	P	Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3)
ruditapes2_c2248	detoxification of zinc ion	other biological processes	P	Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3)
ruditapes_c21309	calcium ion-dependent exocytosis	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	calcium ion transport	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	sulfur amino acid metabolic process	other metabolic processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	calcium ion-dependent exocytosis of neurotransmitter	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	calcium ion-dependent exocytosis of neurotransmitter	cell-cell signaling	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	dendrite morphogenesis	developmental processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	behavioral response to pain	stress response	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	glucose metabolic process	other metabolic processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	transport	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	cerebellar molecular layer development	developmental processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	neuromuscular process controlling balance	other biological processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	gamma-aminobutyric acid signaling pathway	signal transduction	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	elevation of cytosolic calcium ion concentration	other biological processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	vestibular nucleus development	developmental processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	regulation of axonogenesis	developmental processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	regulation of axonogenesis	cell organization and biogenesis	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	central nervous system neuron differentiation	developmental processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	response to pain	stress response	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	cerebellar Purkinje cell differentiation	developmental processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	ion transport	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	regulation of membrane potential	other biological processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	neuromuscular synaptic transmission	cell-cell signaling	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	negative regulation of neuron apoptosis	death	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	cerebellar Purkinje cell layer development	developmental processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	regulation of transmembrane ion transport	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	"musculoskeletal movement, spinal reflex action"	other biological processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	membrane depolarization	other biological processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	rhythmic synaptic transmission	cell-cell signaling	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	spinal cord motor neuron differentiation	developmental processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	neurotransmitter metabolic process	cell-cell signaling	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	regulation of calcium ion-dependent exocytosis	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	neurological system process	other biological processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	cerebellum maturation	developmental processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	"synaptic transmission, glutamatergic"	cell-cell signaling	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	gamma-aminobutyric acid secretion	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	gamma-aminobutyric acid secretion	cell-cell signaling	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	transmission of nerve impulse	other biological processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	neuromuscular process	other biological processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	cellular chloride ion homeostasis	other biological processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	neurotransmitter metabolic process	other metabolic processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	negative regulation of hormone biosynthetic process	other metabolic processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	synaptogenesis	developmental processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	synaptogenesis	cell organization and biogenesis	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	nerve-nerve synaptic transmission	cell-cell signaling	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	hormone metabolic process	other metabolic processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	synaptic transmission	cell-cell signaling	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	regulation of acetylcholine secretion	cell-cell signaling	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	cell growth	other biological processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	"synaptic transmission, GABAergic"	cell-cell signaling	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	transmembrane transport	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	transmembrane calcium ion transport	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	dendrite morphogenesis	cell organization and biogenesis	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	adult walking behavior	other biological processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	receptor clustering	signal transduction	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	receptor clustering	other metabolic processes	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	receptor clustering	cell organization and biogenesis	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_c21309	regulation of acetylcholine secretion	transport	P	"Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Brain calcium channel I) (BI) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Voltage-gated calcium channel subunit alpha Cav2.1)"
ruditapes_s39986	translation	protein metabolism	P	"40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed]"
ruditapes2_c420	response to oxidative stress	stress response	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes2_c420	oxidation reduction	other metabolic processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes2_c420	neurogenesis	developmental processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes2_c420	in utero embryonic development	developmental processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes2_c420	respiratory electron transport chain	other metabolic processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes2_c420	mitochondrial ATP synthesis coupled electron transport	other metabolic processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes2_c420	age-dependent response to oxidative stress	stress response	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes2_c420	mitochondrion morphogenesis	cell organization and biogenesis	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes2_c420	cellular response to oxidative stress	stress response	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes2_c420	ubiquinone biosynthetic process	other metabolic processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes2_c420	neural tube formation	developmental processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes2_c420	determination of adult life span	developmental processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_c9480	cell adhesion	cell adhesion	P	Contactin-5 (Neural recognition molecule NB-2)
ruditapes_c8391	response to vitamin E	other biological processes	P	Peptidyl-prolyl cis-trans isomerase FKBP1B (PPIase FKBP1B) (EC 5.2.1.8) (12.6 kDa FK506-binding protein) (12.6 kDa FKBP) (FKBP-12.6) (Calstabin-2) (FK506-binding protein 1B) (FKBP-1B) (Immunophilin FKBP12.6) (Rotamase)
ruditapes_c8391	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase FKBP1B (PPIase FKBP1B) (EC 5.2.1.8) (12.6 kDa FK506-binding protein) (12.6 kDa FKBP) (FKBP-12.6) (Calstabin-2) (FK506-binding protein 1B) (FKBP-1B) (Immunophilin FKBP12.6) (Rotamase)
ruditapes_c8391	negative regulation of protein phosphatase type 2B activity	other metabolic processes	P	Peptidyl-prolyl cis-trans isomerase FKBP1B (PPIase FKBP1B) (EC 5.2.1.8) (12.6 kDa FK506-binding protein) (12.6 kDa FKBP) (FKBP-12.6) (Calstabin-2) (FK506-binding protein 1B) (FKBP-1B) (Immunophilin FKBP12.6) (Rotamase)
ruditapes_c8391	response to organic substance	other biological processes	P	Peptidyl-prolyl cis-trans isomerase FKBP1B (PPIase FKBP1B) (EC 5.2.1.8) (12.6 kDa FK506-binding protein) (12.6 kDa FKBP) (FKBP-12.6) (Calstabin-2) (FK506-binding protein 1B) (FKBP-1B) (Immunophilin FKBP12.6) (Rotamase)
ruditapes_c8391	elevation of cytosolic calcium ion concentration	other biological processes	P	Peptidyl-prolyl cis-trans isomerase FKBP1B (PPIase FKBP1B) (EC 5.2.1.8) (12.6 kDa FK506-binding protein) (12.6 kDa FKBP) (FKBP-12.6) (Calstabin-2) (FK506-binding protein 1B) (FKBP-1B) (Immunophilin FKBP12.6) (Rotamase)
ruditapes_c8391	peptidyl-proline modification	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase FKBP1B (PPIase FKBP1B) (EC 5.2.1.8) (12.6 kDa FK506-binding protein) (12.6 kDa FKBP) (FKBP-12.6) (Calstabin-2) (FK506-binding protein 1B) (FKBP-1B) (Immunophilin FKBP12.6) (Rotamase)
ruditapes_c8391	regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Peptidyl-prolyl cis-trans isomerase FKBP1B (PPIase FKBP1B) (EC 5.2.1.8) (12.6 kDa FK506-binding protein) (12.6 kDa FKBP) (FKBP-12.6) (Calstabin-2) (FK506-binding protein 1B) (FKBP-1B) (Immunophilin FKBP12.6) (Rotamase)
ruditapes_c8391	response to hydrogen peroxide	stress response	P	Peptidyl-prolyl cis-trans isomerase FKBP1B (PPIase FKBP1B) (EC 5.2.1.8) (12.6 kDa FK506-binding protein) (12.6 kDa FKBP) (FKBP-12.6) (Calstabin-2) (FK506-binding protein 1B) (FKBP-1B) (Immunophilin FKBP12.6) (Rotamase)
ruditapes_c8391	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase FKBP1B (PPIase FKBP1B) (EC 5.2.1.8) (12.6 kDa FK506-binding protein) (12.6 kDa FKBP) (FKBP-12.6) (Calstabin-2) (FK506-binding protein 1B) (FKBP-1B) (Immunophilin FKBP12.6) (Rotamase)
ruditapes_c20824	axon guidance	developmental processes	P	Neurofascin
ruditapes_c20824	axon guidance	cell organization and biogenesis	P	Neurofascin
ruditapes_c20824	peripheral nervous system development	developmental processes	P	Neurofascin
ruditapes_c20824	synapse organization	cell organization and biogenesis	P	Neurofascin
ruditapes_c20824	transmission of nerve impulse	other biological processes	P	Neurofascin
ruditapes_c20824	cell adhesion	cell adhesion	P	Neurofascin
ruditapes_c20824	paranodal junction assembly	developmental processes	P	Neurofascin
ruditapes_c20824	paranodal junction assembly	cell organization and biogenesis	P	Neurofascin
ruditapes_c20824	myelination	developmental processes	P	Neurofascin
ruditapes_lrc37662	steroid biosynthetic process	other metabolic processes	P	"Cytochrome P450 11B1, mitochondrial (CYPXIB1) (Cytochrome P450C11) (Steroid 11-beta-hydroxylase) (EC 1.14.15.4)"
ruditapes_lrc37662	oxidation reduction	other metabolic processes	P	"Cytochrome P450 11B1, mitochondrial (CYPXIB1) (Cytochrome P450C11) (Steroid 11-beta-hydroxylase) (EC 1.14.15.4)"
ruditapes_c5429	multicellular organismal development	developmental processes	P	"Disintegrin and metalloproteinase domain-containing protein 18 (ADAM 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine-rich protein III) (tMDC III) (Fragment)"
ruditapes_c5429	cell differentiation	other biological processes	P	"Disintegrin and metalloproteinase domain-containing protein 18 (ADAM 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine-rich protein III) (tMDC III) (Fragment)"
ruditapes_c5429	spermatogenesis	other biological processes	P	"Disintegrin and metalloproteinase domain-containing protein 18 (ADAM 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine-rich protein III) (tMDC III) (Fragment)"
ruditapes_c5429	proteolysis	protein metabolism	P	"Disintegrin and metalloproteinase domain-containing protein 18 (ADAM 18) (Transmembrane metalloproteinase-like, disintegrin-like, and cysteine-rich protein III) (tMDC III) (Fragment)"
ruditapes_c13995	telomere maintenance	DNA metabolism	P	5'-3' exoribonuclease 1 (mXRN1) (EC 3.1.13.-) (Protein Dhm2) (Strand-exchange protein 1 homolog)
ruditapes_c13995	telomere maintenance	cell organization and biogenesis	P	5'-3' exoribonuclease 1 (mXRN1) (EC 3.1.13.-) (Protein Dhm2) (Strand-exchange protein 1 homolog)
ruditapes_c13995	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	5'-3' exoribonuclease 1 (mXRN1) (EC 3.1.13.-) (Protein Dhm2) (Strand-exchange protein 1 homolog)
ruditapes_c13995	cell aging	other biological processes	P	5'-3' exoribonuclease 1 (mXRN1) (EC 3.1.13.-) (Protein Dhm2) (Strand-exchange protein 1 homolog)
ruditapes_c13995	RNA processing	RNA metabolism	P	5'-3' exoribonuclease 1 (mXRN1) (EC 3.1.13.-) (Protein Dhm2) (Strand-exchange protein 1 homolog)
ruditapes_c13995	meiosis	cell cycle and proliferation	P	5'-3' exoribonuclease 1 (mXRN1) (EC 3.1.13.-) (Protein Dhm2) (Strand-exchange protein 1 homolog)
ruditapes_c19364	cell adhesion	cell adhesion	P	Neogenin
ruditapes_c31665	cytokinesis	other biological processes	P	Proline-serine-threonine phosphatase-interacting protein 1 (PEST phosphatase-interacting protein 1)
ruditapes_c20148	cytokinesis	other biological processes	P	Proline-serine-threonine phosphatase-interacting protein 1 (PEST phosphatase-interacting protein 1)
ruditapes_c31665	oxidation reduction	other metabolic processes	P	Proline-serine-threonine phosphatase-interacting protein 1 (PEST phosphatase-interacting protein 1)
ruditapes_c20148	oxidation reduction	other metabolic processes	P	Proline-serine-threonine phosphatase-interacting protein 1 (PEST phosphatase-interacting protein 1)
ruditapes_c20148	cell adhesion	cell adhesion	P	Proline-serine-threonine phosphatase-interacting protein 1 (PEST phosphatase-interacting protein 1)
ruditapes_c31665	cell adhesion	cell adhesion	P	Proline-serine-threonine phosphatase-interacting protein 1 (PEST phosphatase-interacting protein 1)
ruditapes2_c1212	fatty acid metabolic process	other metabolic processes	P	"Peroxisomal multifunctional enzyme type 2 (MFE-2) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) (D-bifunctional protein) (DBP) (Multifunctional protein 2) (MPF-2) [Cleaved into: (3R)-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.n12); Enoyl-CoA hydratase 2 (EC 4.2.1.107) (EC 4.2.1.119) (3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase)]"
ruditapes2_c1212	oxidation reduction	other metabolic processes	P	"Peroxisomal multifunctional enzyme type 2 (MFE-2) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) (D-bifunctional protein) (DBP) (Multifunctional protein 2) (MPF-2) [Cleaved into: (3R)-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.n12); Enoyl-CoA hydratase 2 (EC 4.2.1.107) (EC 4.2.1.119) (3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase)]"
ruditapes2_c1212	cholesterol metabolic process	other metabolic processes	P	"Peroxisomal multifunctional enzyme type 2 (MFE-2) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) (D-bifunctional protein) (DBP) (Multifunctional protein 2) (MPF-2) [Cleaved into: (3R)-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.n12); Enoyl-CoA hydratase 2 (EC 4.2.1.107) (EC 4.2.1.119) (3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase)]"
ruditapes2_c1212	lipid metabolic process	other metabolic processes	P	"Peroxisomal multifunctional enzyme type 2 (MFE-2) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) (D-bifunctional protein) (DBP) (Multifunctional protein 2) (MPF-2) [Cleaved into: (3R)-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.n12); Enoyl-CoA hydratase 2 (EC 4.2.1.107) (EC 4.2.1.119) (3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase)]"
ruditapes2_c1212	metabolic process	other metabolic processes	P	"Peroxisomal multifunctional enzyme type 2 (MFE-2) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) (D-bifunctional protein) (DBP) (Multifunctional protein 2) (MPF-2) [Cleaved into: (3R)-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.n12); Enoyl-CoA hydratase 2 (EC 4.2.1.107) (EC 4.2.1.119) (3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase)]"
ruditapes2_lrc6980	DNA replication	DNA metabolism	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	anterior commissure morphogenesis	developmental processes	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	anterior commissure morphogenesis	cell organization and biogenesis	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	hindbrain development	developmental processes	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	forebrain development	developmental processes	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	Clara cell differentiation	developmental processes	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	Type II pneumocyte differentiation	developmental processes	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	pontine nucleus development	developmental processes	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	negative regulation of cell proliferation	cell cycle and proliferation	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	lung development	developmental processes	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	glial cell differentiation	developmental processes	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	transcription from RNA polymerase II promoter	RNA metabolism	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	Type I pneumocyte differentiation	developmental processes	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes2_lrc6980	chondrocyte differentiation	developmental processes	P	Nuclear factor 1 B-type (NF1-B) (Nuclear factor 1/B) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/B) (NF-I/B) (NFI-B) (TGGCA-binding protein)
ruditapes_c26828	phosphorylation	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c26828	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c26828	dTDP biosynthetic process	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c26828	nucleoside monophosphate phosphorylation	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes2_c3783	transport	transport	P	Cytochrome c oxidase subunit 2 (Cytochrome c oxidase polypeptide II)
ruditapes2_c3783	respiratory electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (Cytochrome c oxidase polypeptide II)
ruditapes2_c3783	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (Cytochrome c oxidase polypeptide II)
ruditapes_c22385	cell differentiation	other biological processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes2_c2474	cell differentiation	other biological processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes2_c2474	cartilage development	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes_c12924	cartilage development	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes_c12924	cell differentiation	other biological processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes_c22385	proteolysis	protein metabolism	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes_c22385	multicellular organismal development	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes_c12924	ossification	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes2_c2474	proteolysis	protein metabolism	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes_c12924	proteolysis	protein metabolism	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes_c22385	cartilage development	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes_c22385	ossification	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes2_c2474	multicellular organismal development	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes_c12924	multicellular organismal development	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes2_c2474	ossification	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.19) (Mammalian tolloid protein) (mTld) (Procollagen C-proteinase) (PCP)
ruditapes_c17916	cell adhesion	cell adhesion	P	Tumor necrosis factor-inducible gene 6 protein (Hyaluronate-binding protein) (TNF-stimulated gene 6 protein) (TSG-6) (Tumor necrosis factor alpha-induced protein 6) (TNF alpha-induced protein 6)
ruditapes_c17916	inflammatory response	stress response	P	Tumor necrosis factor-inducible gene 6 protein (Hyaluronate-binding protein) (TNF-stimulated gene 6 protein) (TSG-6) (Tumor necrosis factor alpha-induced protein 6) (TNF alpha-induced protein 6)
ruditapes_c17916	signal transduction	signal transduction	P	Tumor necrosis factor-inducible gene 6 protein (Hyaluronate-binding protein) (TNF-stimulated gene 6 protein) (TSG-6) (Tumor necrosis factor alpha-induced protein 6) (TNF alpha-induced protein 6)
ruditapes_c17916	cell-cell signaling	cell-cell signaling	P	Tumor necrosis factor-inducible gene 6 protein (Hyaluronate-binding protein) (TNF-stimulated gene 6 protein) (TSG-6) (Tumor necrosis factor alpha-induced protein 6) (TNF alpha-induced protein 6)
ruditapes_c8975	proteolysis	protein metabolism	P	Bone morphogenetic protein 1 homolog (EC 3.4.24.-) (SUBMP)
ruditapes_c8975	multicellular organismal development	developmental processes	P	Bone morphogenetic protein 1 homolog (EC 3.4.24.-) (SUBMP)
ruditapes_c4710	cell differentiation	other biological processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.-)
ruditapes_c4710	cartilage development	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.-)
ruditapes_c5806	cartilage development	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.-)
ruditapes_c5806	cell differentiation	other biological processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.-)
ruditapes_c5806	proteolysis	protein metabolism	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.-)
ruditapes_c4710	multicellular organismal development	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.-)
ruditapes_c4710	ossification	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.-)
ruditapes_c4710	proteolysis	protein metabolism	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.-)
ruditapes_c5806	ossification	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.-)
ruditapes_c5806	multicellular organismal development	developmental processes	P	Bone morphogenetic protein 1 (BMP-1) (EC 3.4.24.-)
ruditapes_c3448	proteolysis	protein metabolism	P	Enteropeptidase (EC 3.4.21.9) (Enterokinase) (Serine protease 7) (Transmembrane protease serine 15) [Cleaved into: Enteropeptidase non-catalytic heavy chain; Enteropeptidase catalytic light chain]
ruditapes_s37992	proteolysis	protein metabolism	P	Enteropeptidase (EC 3.4.21.9) (Enterokinase) (Serine protease 7) (Transmembrane protease serine 15) [Cleaved into: Enteropeptidase non-catalytic heavy chain; Enteropeptidase catalytic light chain]
ruditapes2_c2314	proteolysis	protein metabolism	P	Enteropeptidase (EC 3.4.21.9) (Enterokinase) (Serine protease 7) (Transmembrane protease serine 15) [Cleaved into: Enteropeptidase non-catalytic mini chain; Enteropeptidase non-catalytic heavy chain; Enteropeptidase catalytic light chain]
ruditapes_c15279	O-glycan processing	protein metabolism	P	"Mucin-5AC (MUC-5AC) (Gastric mucin) (Lewis B blood group antigen) (LeB) (Major airway glycoprotein) (Mucin-5 subtype AC, tracheobronchial) (Tracheobronchial mucin) (TBM) (Fragments)"
ruditapes_c15279	cell adhesion	cell adhesion	P	"Mucin-5AC (MUC-5AC) (Gastric mucin) (Lewis B blood group antigen) (LeB) (Major airway glycoprotein) (Mucin-5 subtype AC, tracheobronchial) (Tracheobronchial mucin) (TBM) (Fragments)"
ruditapes_c15279	post-translational protein modification	protein metabolism	P	"Mucin-5AC (MUC-5AC) (Gastric mucin) (Lewis B blood group antigen) (LeB) (Major airway glycoprotein) (Mucin-5 subtype AC, tracheobronchial) (Tracheobronchial mucin) (TBM) (Fragments)"
ruditapes_c15279	fibril organization	cell organization and biogenesis	P	"Mucin-5AC (MUC-5AC) (Gastric mucin) (Lewis B blood group antigen) (LeB) (Major airway glycoprotein) (Mucin-5 subtype AC, tracheobronchial) (Tracheobronchial mucin) (TBM) (Fragments)"
ruditapes_c15279	cellular protein metabolic process	protein metabolism	P	"Mucin-5AC (MUC-5AC) (Gastric mucin) (Lewis B blood group antigen) (LeB) (Major airway glycoprotein) (Mucin-5 subtype AC, tracheobronchial) (Tracheobronchial mucin) (TBM) (Fragments)"
ruditapes_c15279	digestion	other biological processes	P	"Mucin-5AC (MUC-5AC) (Gastric mucin) (Lewis B blood group antigen) (LeB) (Major airway glycoprotein) (Mucin-5 subtype AC, tracheobronchial) (Tracheobronchial mucin) (TBM) (Fragments)"
ruditapes_c5095	cell adhesion	cell adhesion	P	Hemocytin (Humoral lectin)
ruditapes_c13387	cell adhesion	cell adhesion	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes_c11134	cell adhesion	cell adhesion	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes_c9436	immune response	other biological processes	P	Complement component C8 alpha chain (Complement component 8 subunit alpha)
ruditapes_c9436	innate immune response	stress response	P	Complement component C8 alpha chain (Complement component 8 subunit alpha)
ruditapes_c9436	"complement activation, classical pathway"	stress response	P	Complement component C8 alpha chain (Complement component 8 subunit alpha)
ruditapes_c9436	complement activation	stress response	P	Complement component C8 alpha chain (Complement component 8 subunit alpha)
ruditapes_c9436	complement activation	protein metabolism	P	Complement component C8 alpha chain (Complement component 8 subunit alpha)
ruditapes_c9436	"complement activation, classical pathway"	protein metabolism	P	Complement component C8 alpha chain (Complement component 8 subunit alpha)
ruditapes_c9436	"complement activation, alternative pathway"	stress response	P	Complement component C8 alpha chain (Complement component 8 subunit alpha)
ruditapes_c9436	"complement activation, alternative pathway"	protein metabolism	P	Complement component C8 alpha chain (Complement component 8 subunit alpha)
ruditapes_c9436	cytolysis	death	P	Complement component C8 alpha chain (Complement component 8 subunit alpha)
ruditapes_c15223	"complement activation, alternative pathway"	stress response	P	Complement component C8 beta chain (Complement component 8 subunit beta)
ruditapes_c15223	"complement activation, alternative pathway"	protein metabolism	P	Complement component C8 beta chain (Complement component 8 subunit beta)
ruditapes_c15223	immune response	other biological processes	P	Complement component C8 beta chain (Complement component 8 subunit beta)
ruditapes_c15223	innate immune response	stress response	P	Complement component C8 beta chain (Complement component 8 subunit beta)
ruditapes_c15223	cytolysis	death	P	Complement component C8 beta chain (Complement component 8 subunit beta)
ruditapes_c15223	"complement activation, classical pathway"	stress response	P	Complement component C8 beta chain (Complement component 8 subunit beta)
ruditapes_c15223	"complement activation, classical pathway"	protein metabolism	P	Complement component C8 beta chain (Complement component 8 subunit beta)
ruditapes_c25211	cell adhesion	cell adhesion	P	Integral membrane protein DGCR2/IDD
ruditapes_c25211	organ morphogenesis	developmental processes	P	Integral membrane protein DGCR2/IDD
ruditapes_c31189	endocytosis	transport	P	Low-density lipoprotein receptor-related protein 1 (LRP-1) (Alpha-2-macroglobulin receptor) (A2MR)
ruditapes_c31189	endocytosis	cell organization and biogenesis	P	Low-density lipoprotein receptor-related protein 1 (LRP-1) (Alpha-2-macroglobulin receptor) (A2MR)
ruditapes_c19799	lipid metabolic process	other metabolic processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) (PLC) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c19799	endochondral ossification	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) (PLC) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c19799	chondrocyte differentiation	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) (PLC) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c19799	lipoprotein metabolic process	other metabolic processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) (PLC) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c19799	protein localization	other biological processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) (PLC) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c19799	embryonic skeletal system morphogenesis	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) (PLC) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c19799	cartilage development involved in endochondral bone morphogenesis	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) (PLC) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c19799	extracellular matrix organization	cell organization and biogenesis	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) (PLC) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c19799	angiogenesis	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) (PLC) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c19799	cardiac muscle tissue development	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) (PLC) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c19799	brain development	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) (Perlecan) (PLC) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c10350	anatomical structure morphogenesis	other biological processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	in utero embryonic development	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	calcium ion transport	transport	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	transmembrane ion transport	transport	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	peptidyl-serine phosphorylation	protein metabolism	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	protein export from nucleus	transport	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	cell-cell adhesion	cell adhesion	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	calcium-independent cell-matrix adhesion	cell adhesion	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	JAK-STAT cascade	signal transduction	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	cell-matrix adhesion	cell adhesion	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	branching morphogenesis of a tube	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	cell cycle arrest	cell cycle and proliferation	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	neuropeptide signaling pathway	signal transduction	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	detection of mechanical stimulus	other biological processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	cartilage condensation	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	cartilage condensation	cell adhesion	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	blood vessel development	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	homophilic cell adhesion	cell adhesion	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	cation transport	transport	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes_c10350	heart development	developmental processes	P	Polycystin-1 (Autosomal dominant polycystic kidney disease 1 protein)
ruditapes2_c811	endocytosis	transport	P	Putative vitellogenin receptor (Protein yolkless) (YL)
ruditapes2_c811	endocytosis	cell organization and biogenesis	P	Putative vitellogenin receptor (Protein yolkless) (YL)
ruditapes2_c811	oogenesis	other biological processes	P	Putative vitellogenin receptor (Protein yolkless) (YL)
ruditapes_c13890	endocytosis	transport	P	Putative vitellogenin receptor (Protein yolkless) (YL)
ruditapes_c13890	endocytosis	cell organization and biogenesis	P	Putative vitellogenin receptor (Protein yolkless) (YL)
ruditapes_c13890	oogenesis	other biological processes	P	Putative vitellogenin receptor (Protein yolkless) (YL)
ruditapes_c13316	receptor-mediated endocytosis	transport	P	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)
ruditapes_c13316	receptor-mediated endocytosis	cell organization and biogenesis	P	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)
ruditapes_c13316	lipid metabolic process	other metabolic processes	P	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)
ruditapes_c13316	protein amino acid glycosylation	protein metabolism	P	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)
ruditapes_c13316	endocytosis	cell organization and biogenesis	P	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)
ruditapes_c13316	cell proliferation	cell cycle and proliferation	P	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)
ruditapes_c13316	endocytosis	transport	P	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)
ruditapes_c13316	vitamin D metabolic process	other metabolic processes	P	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)
ruditapes_c13316	forebrain development	developmental processes	P	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)
ruditapes_c13316	vitamin metabolic process	other metabolic processes	P	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)
ruditapes_c13316	steroid metabolic process	other metabolic processes	P	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)
ruditapes_c23518	negative regulation of caspase activity	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP-like protein) (ILP) (hILP) (Inhibitor of apoptosis protein 3) (IAP-3) (hIAP-3) (hIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_c23518	negative regulation of peptidase activity	other biological processes	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP-like protein) (ILP) (hILP) (Inhibitor of apoptosis protein 3) (IAP-3) (hIAP-3) (hIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_c23518	induction of apoptosis by intracellular signals	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP-like protein) (ILP) (hILP) (Inhibitor of apoptosis protein 3) (IAP-3) (hIAP-3) (hIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_c23518	anti-apoptosis	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP-like protein) (ILP) (hILP) (Inhibitor of apoptosis protein 3) (IAP-3) (hIAP-3) (hIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_c23518	apoptosis	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP-like protein) (ILP) (hILP) (Inhibitor of apoptosis protein 3) (IAP-3) (hIAP-3) (hIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_c23518	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP-like protein) (ILP) (hILP) (Inhibitor of apoptosis protein 3) (IAP-3) (hIAP-3) (hIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_c13541	icosanoid metabolic process	other metabolic processes	P	Cytochrome P450 4F8 (EC 1.14.14.1) (CYPIVF8)
ruditapes_c13541	oxidation reduction	other metabolic processes	P	Cytochrome P450 4F8 (EC 1.14.14.1) (CYPIVF8)
ruditapes_c13541	prostaglandin metabolic process	other metabolic processes	P	Cytochrome P450 4F8 (EC 1.14.14.1) (CYPIVF8)
ruditapes_c13541	xenobiotic metabolic process	other metabolic processes	P	Cytochrome P450 4F8 (EC 1.14.14.1) (CYPIVF8)
ruditapes2_c2853	phospholipid transport	transport	P	Probable phospholipid-transporting ATPase IH (EC 3.6.3.1) (ATPase IS) (ATPase class VI type 11A)
ruditapes2_c2853	cation transport	transport	P	Probable phospholipid-transporting ATPase IH (EC 3.6.3.1) (ATPase IS) (ATPase class VI type 11A)
ruditapes_c24317	phospholipid transport	transport	P	Probable phospholipid-transporting ATPase ID (EC 3.6.3.1) (ATPase class I type 8B member 2)
ruditapes_c24317	cation transport	transport	P	Probable phospholipid-transporting ATPase ID (EC 3.6.3.1) (ATPase class I type 8B member 2)
ruditapes_c17415	cation transport	transport	P	Phospholipid-transporting ATPase 1 (AtALA1) (EC 3.6.3.1) (Aminophospholipid flippase 1)
ruditapes_c17415	phospholipid transport	transport	P	Phospholipid-transporting ATPase 1 (AtALA1) (EC 3.6.3.1) (Aminophospholipid flippase 1)
ruditapes_c17415	metabolic process	other metabolic processes	P	Phospholipid-transporting ATPase 1 (AtALA1) (EC 3.6.3.1) (Aminophospholipid flippase 1)
ruditapes_c11260	cAMP biosynthetic process	other metabolic processes	P	Adenylate cyclase type 9 (EC 4.6.1.1) (ATP pyrophosphate-lyase 9) (Adenylate cyclase type IX) (Adenylyl cyclase 9) (xlAC)
ruditapes_c11260	cyclic nucleotide biosynthetic process	other metabolic processes	P	Adenylate cyclase type 9 (EC 4.6.1.1) (ATP pyrophosphate-lyase 9) (Adenylate cyclase type IX) (Adenylyl cyclase 9) (xlAC)
ruditapes2_c3524	proteolysis	protein metabolism	P	Proteasome subunit beta type-4 (EC 3.4.25.1) (Low molecular mass protein 3) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome beta chain) (Proteasome chain 3)
ruditapes2_c3524	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-4 (EC 3.4.25.1) (Low molecular mass protein 3) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome beta chain) (Proteasome chain 3)
ruditapes2_c3524	negative regulation of inflammatory response to antigenic stimulus	stress response	P	Proteasome subunit beta type-4 (EC 3.4.25.1) (Low molecular mass protein 3) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome beta chain) (Proteasome chain 3)
ruditapes_lrc36496	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s37880	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s37880	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s37880	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_s37880	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36496	transport	transport	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36496	protein heterooligomerization	cell organization and biogenesis	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_lrc36496	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit 6, mitochondrial (Complex III subunit 6) (Complex III subunit VIII) (Cytochrome c1 non-heme 11 kDa protein) (Mitochondrial hinge protein) (Ubiquinol-cytochrome c reductase complex 11 kDa protein)"
ruditapes_c27233	startle response	other biological processes	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	brain morphogenesis	developmental processes	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	inter-male aggressive behavior	other biological processes	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	cell adhesion	cell adhesion	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	heart development	developmental processes	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	regulation of embryonic development	developmental processes	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	axon guidance	developmental processes	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	axon guidance	cell organization and biogenesis	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	regulation of cell migration	other biological processes	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	mesoderm development	developmental processes	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	female meiosis chromosome segregation	cell cycle and proliferation	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	locomotion involved in locomotory behavior	other biological processes	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c27233	regulation of cell adhesion	cell adhesion	P	Laminin subunit alpha (Laminin A chain)
ruditapes_c28539	ion transport	transport	P	"cGMP-gated cation channel alpha-1 (Cyclic nucleotide-gated cation channel 1) (Cyclic nucleotide-gated channel alpha-1) (CNG channel alpha-1) (CNG-1) (CNG1) (Cyclic nucleotide-gated channel, photoreceptor) (Rod photoreceptor cGMP-gated channel subunit alpha)"
ruditapes_c28539	transport	transport	P	"cGMP-gated cation channel alpha-1 (Cyclic nucleotide-gated cation channel 1) (Cyclic nucleotide-gated channel alpha-1) (CNG channel alpha-1) (CNG-1) (CNG1) (Cyclic nucleotide-gated channel, photoreceptor) (Rod photoreceptor cGMP-gated channel subunit alpha)"
ruditapes_c28539	response to stimulus	other biological processes	P	"cGMP-gated cation channel alpha-1 (Cyclic nucleotide-gated cation channel 1) (Cyclic nucleotide-gated channel alpha-1) (CNG channel alpha-1) (CNG-1) (CNG1) (Cyclic nucleotide-gated channel, photoreceptor) (Rod photoreceptor cGMP-gated channel subunit alpha)"
ruditapes_c28539	visual perception	other biological processes	P	"cGMP-gated cation channel alpha-1 (Cyclic nucleotide-gated cation channel 1) (Cyclic nucleotide-gated channel alpha-1) (CNG channel alpha-1) (CNG-1) (CNG1) (Cyclic nucleotide-gated channel, photoreceptor) (Rod photoreceptor cGMP-gated channel subunit alpha)"
ruditapes_c28539	transmembrane transport	transport	P	"cGMP-gated cation channel alpha-1 (Cyclic nucleotide-gated cation channel 1) (Cyclic nucleotide-gated channel alpha-1) (CNG channel alpha-1) (CNG-1) (CNG1) (Cyclic nucleotide-gated channel, photoreceptor) (Rod photoreceptor cGMP-gated channel subunit alpha)"
ruditapes_lrc28448	meiosis	cell cycle and proliferation	P	Protein rad9 (SCC2 homolog)
ruditapes_lrc28448	cell cycle	cell cycle and proliferation	P	Protein rad9 (SCC2 homolog)
ruditapes_lrc28448	response to DNA damage stimulus	stress response	P	Protein rad9 (SCC2 homolog)
ruditapes_lrc28448	DNA repair	stress response	P	Protein rad9 (SCC2 homolog)
ruditapes_lrc28448	DNA repair	DNA metabolism	P	Protein rad9 (SCC2 homolog)
ruditapes_c17330	"transcription, DNA-dependent"	RNA metabolism	P	Probable transcription repressor protein RGM1
ruditapes_c17330	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Probable transcription repressor protein RGM1
ruditapes_c17330	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable transcription repressor protein RGM1
ruditapes_c15952	synapse organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	associative learning	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	neuron adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	long-term synaptic potentiation	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	negative regulation of axon extension	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	negative regulation of neuron projection development	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	negative regulation of neuron projection development	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	negative regulation of axon extension	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	negative regulation of neuron projection development	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	negative regulation of neuron projection development	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	signal transduction	signal transduction	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	negative regulation of cell-cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	associative learning	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	long-term synaptic potentiation	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	negative regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	synapse organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	neuron adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	negative regulation of axon extension	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	associative learning	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	"positive regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	"positive regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	negative regulation of axon extension involved in regeneration	stress response	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	negative regulation of axon extension involved in regeneration	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	negative regulation of axon extension involved in regeneration	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	negative regulation of axon extension	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	telencephalon cell migration	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	positive regulation of transmission of nerve impulse	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	long-term synaptic potentiation	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	"positive regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	neuromuscular process controlling balance	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	synapse organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	long-term synaptic potentiation	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	negative regulation of cell-cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	neuromuscular process controlling balance	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	negative regulation of axon extension	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	negative regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	negative regulation of axon extension involved in regeneration	stress response	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	negative regulation of axon extension involved in regeneration	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	negative regulation of axon extension involved in regeneration	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	negative regulation of neuron projection development	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	negative regulation of neuron projection development	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	signal transduction	signal transduction	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	extracellular matrix organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	signal transduction	signal transduction	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	associative learning	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	positive regulation of transmission of nerve impulse	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	signal transduction	signal transduction	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	negative regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	negative regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	negative regulation of axon extension	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	negative regulation of axon extension	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	signal transduction	signal transduction	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	neuron adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	negative regulation of axon extension	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	negative regulation of axon extension	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	extracellular matrix organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	negative regulation of neuron projection development	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	negative regulation of neuron projection development	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	negative regulation of axon extension involved in regeneration	stress response	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	negative regulation of axon extension involved in regeneration	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	negative regulation of axon extension involved in regeneration	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	extracellular matrix organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	long-term synaptic potentiation	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	negative regulation of axon extension involved in regeneration	stress response	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	negative regulation of axon extension involved in regeneration	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	negative regulation of axon extension involved in regeneration	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	negative regulation of cell-cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	positive regulation of transmission of nerve impulse	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	synapse organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	"positive regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c15952	positive regulation of transmission of nerve impulse	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	telencephalon cell migration	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	extracellular matrix organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	neuron adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	telencephalon cell migration	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	neuromuscular process controlling balance	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	negative regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	negative regulation of cell-cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	positive regulation of transmission of nerve impulse	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	neuron adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	"positive regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	neuromuscular process controlling balance	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	associative learning	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	telencephalon cell migration	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	negative regulation of cell-cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	negative regulation of axon extension involved in regeneration	stress response	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	negative regulation of axon extension involved in regeneration	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	negative regulation of axon extension involved in regeneration	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_lrc24650	synapse organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	negative regulation of axon extension	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	telencephalon cell migration	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c17145	neuromuscular process controlling balance	other biological processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	negative regulation of neuron projection development	developmental processes	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c11811	negative regulation of neuron projection development	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes2_c2529	extracellular matrix organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Restrictin)
ruditapes_c12121	nervous system development	developmental processes	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c12121	DNA replication initiation	DNA metabolism	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c12121	DNA unwinding during replication	DNA metabolism	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c12121	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c12121	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c12121	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c12121	positive regulation of cell proliferation	cell cycle and proliferation	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c12121	negative regulation of translation	protein metabolism	P	Transcriptional activator protein Pur-alpha (Purine-rich single-stranded DNA-binding protein alpha)
ruditapes_c14294	lipid metabolic process	other metabolic processes	P	"Carnitine O-acetyltransferase, mitochondrial (Carnitine acetylase) (EC 2.3.1.7)"
ruditapes_c14294	fatty acid metabolic process	other metabolic processes	P	"Carnitine O-acetyltransferase, mitochondrial (Carnitine acetylase) (EC 2.3.1.7)"
ruditapes_c14294	transport	transport	P	"Carnitine O-acetyltransferase, mitochondrial (Carnitine acetylase) (EC 2.3.1.7)"
ruditapes_c19854	face development	other biological processes	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	chorio-allantoic fusion	developmental processes	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	chorio-allantoic fusion	cell adhesion	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	cell adhesion	cell adhesion	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	heterophilic cell adhesion	cell adhesion	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	cell-cell adhesion	cell adhesion	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	cell migration	other biological processes	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	blood vessel remodeling	developmental processes	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	heart development	developmental processes	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	leukocyte adhesion	cell adhesion	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	integrin-mediated signaling pathway	signal transduction	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	cell-matrix adhesion	cell adhesion	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c19854	mesenchyme development	developmental processes	P	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
ruditapes_c20672	inflammatory response	stress response	P	Complement C3 [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Complement C3 gamma chain] (Fragment)
ruditapes_c20672	negative regulation of endopeptidase activity	other biological processes	P	Complement C3 [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Complement C3 gamma chain] (Fragment)
ruditapes_c20672	"complement activation, classical pathway"	stress response	P	Complement C3 [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Complement C3 gamma chain] (Fragment)
ruditapes_c20672	"complement activation, classical pathway"	protein metabolism	P	Complement C3 [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Complement C3 gamma chain] (Fragment)
ruditapes_c20672	innate immune response	stress response	P	Complement C3 [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Complement C3 gamma chain] (Fragment)
ruditapes2_c2966	leukocyte adhesion	cell adhesion	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	heterophilic cell adhesion	cell adhesion	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	response to interleukin-1	other biological processes	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	activation of phospholipase C activity	other biological processes	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	response to cytokine stimulus	other biological processes	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	leukocyte tethering or rolling	cell adhesion	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	leukocyte migration	other biological processes	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	positive regulation of receptor internalization	transport	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	positive regulation of receptor internalization	protein metabolism	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	positive regulation of receptor internalization	cell organization and biogenesis	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	actin filament-based process	other biological processes	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	cell adhesion	cell adhesion	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes2_c2966	positive regulation of leukocyte migration	other biological processes	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes_s38607	fatty acid biosynthetic process	other metabolic processes	P	Putative sterigmatocystin biosynthesis fatty acid synthase subunit beta
ruditapes_s38607	lipid biosynthetic process	other metabolic processes	P	Putative sterigmatocystin biosynthesis fatty acid synthase subunit beta
ruditapes_s38607	metabolic process	other metabolic processes	P	Putative sterigmatocystin biosynthesis fatty acid synthase subunit beta
ruditapes_s38607	oxidation reduction	other metabolic processes	P	Putative sterigmatocystin biosynthesis fatty acid synthase subunit beta
ruditapes_lrc36662	response to cytokine stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	lymphocyte homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	protein polyubiquitination	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c36231	behavioral fear response	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c36231	ovarian follicle development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to UV-B	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	cell-cell adhesion	cell adhesion	P	Apoptosis regulator Bcl-2
ruditapes_c36231	actin filament organization	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of protein stability	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c36231	organ growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to acid	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of neuron apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	male gonad development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	positive regulation of multicellular organism growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	organ growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	ear development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	positive regulation of neuron maturation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of ossification	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of cell growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	positive regulation of neuron maturation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	peptidyl-threonine phosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c36231	cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to gamma radiation	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	kidney development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	T cell differentiation in the thymus	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	cell morphogenesis	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of nitrogen utilization	other metabolic processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	cell-cell adhesion	cell adhesion	P	Apoptosis regulator Bcl-2
ruditapes_c36231	positive regulation of cell growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to gamma radiation	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of programmed cell death	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	positive regulation of skeletal muscle fiber development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to nicotine	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	gland morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	cell morphogenesis	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c3202	positive regulation of cell growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	T cell differentiation in the thymus	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	T cell lineage commitment	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of protein stability	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	organ growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	peptidyl-threonine phosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c3202	cell-cell adhesion	cell adhesion	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to nicotine	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	positive regulation of neuron maturation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	T cell lineage commitment	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	cell death	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of cell growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of cell-matrix adhesion	cell adhesion	P	Apoptosis regulator Bcl-2
ruditapes_c36231	lymphocyte homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of protein heterodimerization activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	male gonad development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to gamma radiation	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to DNA damage stimulus	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of cell-matrix adhesion	cell adhesion	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	T cell homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of protein homodimerization activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	anti-apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of glycoprotein biosynthetic process	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of cell cycle	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c3202	kidney development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to DNA damage stimulus	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c3202	hemopoiesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	"CD8-positive, alpha-beta T cell lineage commitment"	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	peptidyl-serine phosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	cell death	death	P	Apoptosis regulator Bcl-2
ruditapes_c3202	melanocyte differentiation	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c36231	ear development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of nitrogen utilization	other metabolic processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	hemopoiesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to hydrogen peroxide	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c3202	axon regeneration	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c3202	axon regeneration	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	axon regeneration	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	homeostasis of number of cells within a tissue	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	glomerulus development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	leukocyte homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	T cell differentiation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	B cell lineage commitment	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	ureteric bud development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	axon regeneration	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c3202	apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_c3202	B cell differentiation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to oxidative stress	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c3202	ureteric bud development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	positive regulation of cell growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to external stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	melanin metabolic process	other metabolic processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	positive regulation of B cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	axon regeneration	stress response	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	axon regeneration	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of calcium ion transport into cytosol	transport	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of protein heterodimerization activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	B cell lineage commitment	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to toxin	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to acid	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	positive regulation of skeletal muscle fiber development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	axon regeneration	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	axon regeneration	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c36231	positive regulation of B cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c3202	positive regulation of melanocyte differentiation	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	protein polyubiquitination	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c36231	apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	ossification	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	B cell differentiation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of neuron apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	apoptosis in response to endoplasmic reticulum stress	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	axon regeneration	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c3202	B cell lineage commitment	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	axonogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	axonogenesis	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	post-embryonic development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	organ morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	immune system development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	positive regulation of melanocyte differentiation	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of cell growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	organ morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	peptidyl-serine phosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c3202	defense response to virus	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of cell cycle	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of calcium ion transport	transport	P	Apoptosis regulator Bcl-2
ruditapes_c3202	axonogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	axonogenesis	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of programmed cell death	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	hemopoiesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of transmembrane transporter activity	transport	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to oxidative stress	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to external stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	cell growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	cellular calcium ion homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of cell migration	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	positive regulation of melanocyte differentiation	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	homeostasis of number of cells within a tissue	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to steroid hormone stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to toxin	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	ureteric bud development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of transmembrane transporter activity	transport	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	leukocyte homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	T cell lineage commitment	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	B cell differentiation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	organ morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to oxidative stress	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c3202	developmental growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	cell morphogenesis	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of protein heterodimerization activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to iron ion	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	post-embryonic development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to toxin	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	gland morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to cytokine stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	peptidyl-serine phosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c36231	T cell differentiation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	positive regulation of pigmentation during development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	digestive tract morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of neuron apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to nicotine	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	melanocyte differentiation	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	T cell differentiation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of cell-matrix adhesion	cell adhesion	P	Apoptosis regulator Bcl-2
ruditapes_c3202	thymus development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of glycoprotein biosynthetic process	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c3202	release of cytochrome c from mitochondria	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c3202	release of cytochrome c from mitochondria	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	lymphocyte homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	positive regulation of B cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c3202	branching involved in ureteric bud morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of retinal cell programmed cell death	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of retinal cell programmed cell death	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	kidney development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	actin filament organization	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of nitrogen utilization	other metabolic processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	post-embryonic development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	apoptosis in response to endoplasmic reticulum stress	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to external stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	spleen development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	cell aging	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	cellular calcium ion homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to glucocorticoid stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	B cell homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	pigment granule organization	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c36231	melanocyte differentiation	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	cell aging	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	digestive tract morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	pigment granule organization	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	cochlear nucleus development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	metanephros development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	B cell homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of mitochondrial membrane permeability	transport	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of mitochondrial membrane permeability	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c36231	spleen development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	cochlear nucleus development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	metanephros development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of pigmentation during development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	cell death	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	positive regulation of multicellular organism growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	T cell homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	metanephros development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	thymus development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	apoptosis in response to endoplasmic reticulum stress	death	P	Apoptosis regulator Bcl-2
ruditapes_c3202	oocyte development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to hydrogen peroxide	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c36231	defense response to virus	stress response	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	endoplasmic reticulum calcium ion homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	cell aging	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	"CD8-positive, alpha-beta T cell lineage commitment"	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of catalytic activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	release of cytochrome c from mitochondria	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c36231	release of cytochrome c from mitochondria	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of pigmentation during development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	endoplasmic reticulum calcium ion homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of cellular pH reduction	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of pigmentation during development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	cellular calcium ion homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of retinal cell programmed cell death	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of retinal cell programmed cell death	death	P	Apoptosis regulator Bcl-2
ruditapes_c3202	protein amino acid dephosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	protein amino acid dephosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to chemical stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of mitochondrial membrane permeability	transport	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of mitochondrial membrane permeability	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of protein homodimerization activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	positive regulation of catalytic activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	mesenchymal cell development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	neuron apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of myeloid cell apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_c3202	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	oocyte development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c36231	developmental growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of gene expression	other metabolic processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of protein homodimerization activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	behavioral fear response	stress response	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	focal adhesion formation	cell adhesion	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	focal adhesion formation	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c3202	ear development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of cell migration	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	cochlear nucleus development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	male gonad development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	pigment granule organization	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of protein stability	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c3202	ovarian follicle development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of mitochondrial membrane potential	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of programmed cell death	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	branching involved in ureteric bud morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of gene expression	other metabolic processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	renal system process	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	focal adhesion formation	cell adhesion	P	Apoptosis regulator Bcl-2
ruditapes_c3202	focal adhesion formation	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	ovarian follicle development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	pigmentation during development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of retinal cell programmed cell death	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of retinal cell programmed cell death	death	P	Apoptosis regulator Bcl-2
ruditapes_c3202	pigmentation during development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of mitochondrial membrane permeability	transport	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of mitochondrial membrane permeability	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	behavioral fear response	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c36231	protein amino acid dephosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of catalytic activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to UV-B	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	defense response to virus	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c3202	B cell receptor signaling pathway	signal transduction	P	Apoptosis regulator Bcl-2
ruditapes_c3202	peptidyl-threonine phosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to cytokine stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to hydrogen peroxide	stress response	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	lymphoid progenitor cell differentiation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	immune system development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to UV-B	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of protein localization	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of osteoblast proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c3202	T cell differentiation in the thymus	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	positive regulation of multicellular organism growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	positive regulation of pigmentation during development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of mitochondrial membrane potential	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	T cell homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to steroid hormone stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of cell migration	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	positive regulation of smooth muscle cell migration	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	B cell receptor signaling pathway	signal transduction	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	mesenchymal cell development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	endoplasmic reticulum calcium ion homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to glucocorticoid stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	cell growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of calcium ion transport into cytosol	transport	P	Apoptosis regulator Bcl-2
ruditapes_c36231	lymphoid progenitor cell differentiation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to iron ion	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to glucocorticoid stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	melanin metabolic process	other metabolic processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	anti-apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	B cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of transmembrane transporter activity	transport	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to acid	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	neuron apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of osteoblast proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	developmental growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	protein polyubiquitination	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of mitotic cell cycle	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to drug	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of calcium ion transport into cytosol	transport	P	Apoptosis regulator Bcl-2
ruditapes_c3202	glomerulus development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	positive regulation of catalytic activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of calcium ion transport	transport	P	Apoptosis regulator Bcl-2
ruditapes_c3202	renal system process	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	positive regulation of smooth muscle cell migration	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of ossification	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	immune system development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to drug	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of cellular pH reduction	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of calcium ion transport	transport	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	regulation of protein localization	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	axonogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	axonogenesis	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of ossification	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to chemical stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	renal system process	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	ossification	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of myeloid cell apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c3202	lymphoid progenitor cell differentiation	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	positive regulation of smooth muscle cell migration	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of cell cycle	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c36231	cell growth	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to steroid hormone stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	negative regulation of mitotic cell cycle	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to iron ion	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	B cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c3202	regulation of glycoprotein biosynthetic process	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c36231	B cell homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	actin filament organization	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c36231	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Apoptosis regulator Bcl-2
ruditapes_c36231	"CD8-positive, alpha-beta T cell lineage commitment"	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of protein localization	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	ossification	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	response to chemical stimulus	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	release of cytochrome c from mitochondria	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	release of cytochrome c from mitochondria	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of mitochondrial membrane potential	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	oocyte development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	neuron apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	positive regulation of catalytic activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	homeostasis of number of cells within a tissue	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	B cell receptor signaling pathway	signal transduction	P	Apoptosis regulator Bcl-2
ruditapes_c3202	leukocyte homeostasis	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	branching involved in ureteric bud morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	pigmentation during development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	positive regulation of pigmentation during development	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	mesenchymal cell development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c3202	gland morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	glomerulus development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of catalytic activity	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	B cell proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of osteoblast proliferation	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_c36231	negative regulation of mitotic cell cycle	cell cycle and proliferation	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	digestive tract morphogenesis	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of cellular pH reduction	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	response to drug	other biological processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	negative regulation of myeloid cell apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_c36231	anti-apoptosis	death	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	spleen development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_lrc36662	thymus development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	melanin metabolic process	other metabolic processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	regulation of gene expression	other metabolic processes	P	Apoptosis regulator Bcl-2
ruditapes_c36231	focal adhesion formation	cell adhesion	P	Apoptosis regulator Bcl-2
ruditapes_c36231	focal adhesion formation	cell organization and biogenesis	P	Apoptosis regulator Bcl-2
ruditapes_c3202	response to DNA damage stimulus	stress response	P	Apoptosis regulator Bcl-2
ruditapes_c3202	positive regulation of skeletal muscle fiber development	developmental processes	P	Apoptosis regulator Bcl-2
ruditapes_c25753	cell division	other biological processes	P	Chromosome segregation protein sudA (DA-box protein sudA)
ruditapes_c25753	chromosome organization	cell organization and biogenesis	P	Chromosome segregation protein sudA (DA-box protein sudA)
ruditapes_c25753	cell cycle	cell cycle and proliferation	P	Chromosome segregation protein sudA (DA-box protein sudA)
ruditapes_c25753	mitosis	cell cycle and proliferation	P	Chromosome segregation protein sudA (DA-box protein sudA)
ruditapes_c25753	mitosis	cell organization and biogenesis	P	Chromosome segregation protein sudA (DA-box protein sudA)
ruditapes_c27495	sorbitol metabolic process	other metabolic processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c27495	sperm motility	other biological processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c27495	L-xylitol catabolic process	other metabolic processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c27495	sorbitol catabolic process	other metabolic processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c27495	glucose metabolic process	other metabolic processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c27495	oxidation reduction	other metabolic processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c27495	L-xylitol metabolic process	other metabolic processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c27495	fructose biosynthetic process	other metabolic processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c13458	vacuolar protein catabolic process	protein metabolism	P	Resistance to glucose repression protein 1 (Protein HEX2) (Second-site suppressor of the rna1-1 mutation 1)
ruditapes_c13458	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Resistance to glucose repression protein 1 (Protein HEX2) (Second-site suppressor of the rna1-1 mutation 1)
ruditapes_c13458	glycogen metabolic process	other metabolic processes	P	Resistance to glucose repression protein 1 (Protein HEX2) (Second-site suppressor of the rna1-1 mutation 1)
ruditapes_c13458	cellular response to glucose starvation	stress response	P	Resistance to glucose repression protein 1 (Protein HEX2) (Second-site suppressor of the rna1-1 mutation 1)
ruditapes_c13458	regulation of carbohydrate metabolic process	other metabolic processes	P	Resistance to glucose repression protein 1 (Protein HEX2) (Second-site suppressor of the rna1-1 mutation 1)
ruditapes_c20265	transport	transport	P	Probable ATP-dependent transporter ycf16
ruditapes_c20265	ATP catabolic process	other metabolic processes	P	Probable ATP-dependent transporter ycf16
ruditapes_s36002	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_s36002	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_s36002	transport	transport	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_c22675	methylation	other metabolic processes	P	Enniatin synthase [Includes: N-methylcyclopeptide synthetase (EC 6.3.2.-); S-adenosyl-L-methionine-dependent N-methyltransferase (EC 2.1.1.-)]
ruditapes_c22675	nonribosomal peptide biosynthetic process	other metabolic processes	P	Enniatin synthase [Includes: N-methylcyclopeptide synthetase (EC 6.3.2.-); S-adenosyl-L-methionine-dependent N-methyltransferase (EC 2.1.1.-)]
ruditapes_c22675	metabolic process	other metabolic processes	P	Enniatin synthase [Includes: N-methylcyclopeptide synthetase (EC 6.3.2.-); S-adenosyl-L-methionine-dependent N-methyltransferase (EC 2.1.1.-)]
ruditapes_c15646	regulation of Rho protein signal transduction	signal transduction	P	Epithelial cell-transforming sequence 2 oncogene-like (Lung-specific F-box and DH domain-containing protein) (Putative guanine nucleotide exchange factor LFDH)
ruditapes_c15316	defense response to protozoan	stress response	P	Putative defense protein
ruditapes_c15316	defense response to bacterium	stress response	P	Putative defense protein
ruditapes_c9307	defense response to bacterium	stress response	P	Putative defense protein
ruditapes_c9307	defense response to protozoan	stress response	P	Putative defense protein
ruditapes_c9307	innate immune response	stress response	P	Putative defense protein
ruditapes_c15316	innate immune response	stress response	P	Putative defense protein
ruditapes2_c930	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Early growth response protein 4 (EGR-4) (Early response protein NGFI-C) (Nerve growth factor-induced protein C) (NGFI-C)
ruditapes2_c930	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Early growth response protein 4 (EGR-4) (Early response protein NGFI-C) (Nerve growth factor-induced protein C) (NGFI-C)
ruditapes2_c930	"transcription, DNA-dependent"	RNA metabolism	P	Early growth response protein 4 (EGR-4) (Early response protein NGFI-C) (Nerve growth factor-induced protein C) (NGFI-C)
ruditapes_c29854	response to cytokine stimulus	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	long-term memory	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to organic cyclic substance	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to methylmercury	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to manganese ion	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to ethanol	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to other organism	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	regulation of action potential	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	cellular response to magnesium starvation	stress response	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	transport	transport	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to growth hormone stimulus	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to calcium ion	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to cocaine	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	receptor clustering	signal transduction	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	receptor clustering	other metabolic processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	receptor clustering	cell organization and biogenesis	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	associative learning	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	rhythmic process	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to acid	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to mechanical stimulus	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	regulation of long-term neuronal synaptic plasticity	cell-cell signaling	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to carbohydrate stimulus	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	regulation of MAPKKK cascade	signal transduction	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	positive regulation of synaptic transmission	cell-cell signaling	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	positive regulation of cell death	death	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to magnesium ion	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	learning or memory	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to amine stimulus	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	ionotropic glutamate receptor signaling pathway	signal transduction	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to electrical stimulus	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	multicellular organismal response to stress	stress response	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	hippocampus development	developmental processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	positive regulation of glutamate secretion	transport	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	positive regulation of glutamate secretion	cell-cell signaling	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	memory	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	response to amphetamine	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	ion transport	transport	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c29854	cerebral cortex development	developmental processes	P	"Glutamate receptor ionotropic, NMDA 2B (GluN2B) (Glutamate [NMDA] receptor subunit epsilon-2) (N-methyl D-aspartate receptor subtype 2B) (NMDAR2B) (NR2B)"
ruditapes_c24436	proteolysis	protein metabolism	P	Inactive rhomboid protein 2 (iRhom2) (Rhomboid family member 2) (Rhomboid veinlet-like protein 6)
ruditapes_c24436	negative regulation of protein secretion	transport	P	Inactive rhomboid protein 2 (iRhom2) (Rhomboid family member 2) (Rhomboid veinlet-like protein 6)
ruditapes_c24436	transport	transport	P	Inactive rhomboid protein 2 (iRhom2) (Rhomboid family member 2) (Rhomboid veinlet-like protein 6)
ruditapes_c24436	protein transport	transport	P	Inactive rhomboid protein 2 (iRhom2) (Rhomboid family member 2) (Rhomboid veinlet-like protein 6)
ruditapes2_c1535	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase large subunit (EC 1.17.4.1) (Ribonucleotide reductase large subunit)
ruditapes2_c1535	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase large subunit (EC 1.17.4.1) (Ribonucleotide reductase large subunit)
ruditapes_c176	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit)
ruditapes_c6781	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit)
ruditapes_c6781	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit)
ruditapes_c6781	deoxyribonucleoside diphosphate metabolic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit)
ruditapes_c176	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit)
ruditapes_c176	deoxyribonucleoside diphosphate metabolic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit)
ruditapes_c634	viral capsid assembly	cell organization and biogenesis	P	Triplex capsid protein 62
ruditapes_c16591	cGMP catabolic process	other metabolic processes	P	"Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (Cam-PDE 1B) (EC 3.1.4.17) (63 kDa Cam-PDE)"
ruditapes_c16591	regulation of dopamine metabolic process	other metabolic processes	P	"Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (Cam-PDE 1B) (EC 3.1.4.17) (63 kDa Cam-PDE)"
ruditapes_c16591	locomotory behavior	other biological processes	P	"Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (Cam-PDE 1B) (EC 3.1.4.17) (63 kDa Cam-PDE)"
ruditapes_c16591	regulation of neurotransmitter levels	cell-cell signaling	P	"Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (Cam-PDE 1B) (EC 3.1.4.17) (63 kDa Cam-PDE)"
ruditapes_c16591	cAMP catabolic process	other metabolic processes	P	"Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (Cam-PDE 1B) (EC 3.1.4.17) (63 kDa Cam-PDE)"
ruditapes_c16591	serotonin metabolic process	other metabolic processes	P	"Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (Cam-PDE 1B) (EC 3.1.4.17) (63 kDa Cam-PDE)"
ruditapes_c16591	signal transduction	signal transduction	P	"Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (Cam-PDE 1B) (EC 3.1.4.17) (63 kDa Cam-PDE)"
ruditapes_c16591	response to amphetamine	other biological processes	P	"Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (Cam-PDE 1B) (EC 3.1.4.17) (63 kDa Cam-PDE)"
ruditapes_c16591	visual learning	other biological processes	P	"Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (Cam-PDE 1B) (EC 3.1.4.17) (63 kDa Cam-PDE)"
ruditapes_c21356	SMAD protein nuclear translocation	signal transduction	P	"Spectrin beta chain, non-erythrocytic 1 (Beta-II spectrin) (Fodrin beta chain) (Spectrin, non-erythroid beta chain 1)"
ruditapes_c21356	SMAD protein nuclear translocation	transport	P	"Spectrin beta chain, non-erythrocytic 1 (Beta-II spectrin) (Fodrin beta chain) (Spectrin, non-erythroid beta chain 1)"
ruditapes_c21356	common-partner SMAD protein phosphorylation	signal transduction	P	"Spectrin beta chain, non-erythrocytic 1 (Beta-II spectrin) (Fodrin beta chain) (Spectrin, non-erythroid beta chain 1)"
ruditapes_c21356	common-partner SMAD protein phosphorylation	protein metabolism	P	"Spectrin beta chain, non-erythrocytic 1 (Beta-II spectrin) (Fodrin beta chain) (Spectrin, non-erythroid beta chain 1)"
ruditapes_c21356	actin filament capping	protein metabolism	P	"Spectrin beta chain, non-erythrocytic 1 (Beta-II spectrin) (Fodrin beta chain) (Spectrin, non-erythroid beta chain 1)"
ruditapes_c21356	actin filament capping	cell organization and biogenesis	P	"Spectrin beta chain, non-erythrocytic 1 (Beta-II spectrin) (Fodrin beta chain) (Spectrin, non-erythroid beta chain 1)"
ruditapes_c21356	axon guidance	developmental processes	P	"Spectrin beta chain, non-erythrocytic 1 (Beta-II spectrin) (Fodrin beta chain) (Spectrin, non-erythroid beta chain 1)"
ruditapes_c21356	axon guidance	cell organization and biogenesis	P	"Spectrin beta chain, non-erythrocytic 1 (Beta-II spectrin) (Fodrin beta chain) (Spectrin, non-erythroid beta chain 1)"
ruditapes_lrc32252	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_lrc6583	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c1784	RNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c1784	negative regulation of histone acetylation	protein metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c1784	negative regulation of histone acetylation	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32252	RNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c1784	nucleosome assembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c1784	DNA replication	DNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_lrc6583	DNA replication	DNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc39587	mRNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32438	RNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32252	nucleocytoplasmic transport	transport	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32438	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_c3534	RNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32438	negative regulation of histone acetylation	protein metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32438	negative regulation of histone acetylation	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_c3534	negative regulation of histone acetylation	protein metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_c3534	negative regulation of histone acetylation	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_lrc6583	mRNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc39587	negative regulation of neuron apoptosis	death	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_lrc6583	negative regulation of neuron apoptosis	death	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32252	DNA replication	DNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32252	nucleosome disassembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c1784	nucleocytoplasmic transport	transport	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_lrc6583	nucleocytoplasmic transport	transport	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc39587	DNA replication	DNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_lrc6583	nucleosome disassembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c1784	nucleosome disassembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc39587	nucleosome disassembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc39587	nucleocytoplasmic transport	transport	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_c3534	DNA replication	DNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_c3534	nucleocytoplasmic transport	transport	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32438	nucleocytoplasmic transport	transport	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32252	gene expression	other metabolic processes	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_c3534	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc39587	gene expression	other metabolic processes	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_c3534	nucleosome assembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_lrc6583	gene expression	other metabolic processes	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc39587	nucleosome assembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32252	nucleosome assembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c1784	gene expression	other metabolic processes	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_lrc6583	nucleosome assembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_c3534	nucleosome disassembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32438	nucleosome assembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32438	negative regulation of neuron apoptosis	death	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_lrc6583	negative regulation of histone acetylation	protein metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_lrc6583	negative regulation of histone acetylation	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_c3534	gene expression	other metabolic processes	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c1784	negative regulation of neuron apoptosis	death	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc39587	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32438	DNA replication	DNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_lrc6583	RNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_c3534	negative regulation of neuron apoptosis	death	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32438	gene expression	other metabolic processes	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32252	negative regulation of histone acetylation	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32252	negative regulation of neuron apoptosis	death	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c1784	mRNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32252	mRNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc39587	RNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32438	nucleosome disassembly	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32438	mRNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c1784	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes2_c3534	mRNA metabolic process	RNA metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc39587	negative regulation of histone acetylation	protein metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc39587	negative regulation of histone acetylation	cell organization and biogenesis	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_lrc32252	negative regulation of histone acetylation	protein metabolism	P	Protein SET (HLA-DR-associated protein II) (Inhibitor of granzyme A-activated DNase) (IGAAD) (PHAPII) (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c31536	cell cycle	cell cycle and proliferation	P	Cell division control protein 42 homolog (CDC42Sp)
ruditapes_c31536	establishment or maintenance of actin cytoskeleton polarity	cell organization and biogenesis	P	Cell division control protein 42 homolog (CDC42Sp)
ruditapes_c31536	regulation of barrier septum formation	cell organization and biogenesis	P	Cell division control protein 42 homolog (CDC42Sp)
ruditapes_c31536	cell division	other biological processes	P	Cell division control protein 42 homolog (CDC42Sp)
ruditapes_c31536	regulation of establishment or maintenance of cell polarity	cell organization and biogenesis	P	Cell division control protein 42 homolog (CDC42Sp)
ruditapes_c31536	regulation of conjugation with cellular fusion	other biological processes	P	Cell division control protein 42 homolog (CDC42Sp)
ruditapes_c31536	Cdc42 protein signal transduction	signal transduction	P	Cell division control protein 42 homolog (CDC42Sp)
ruditapes_c31536	GTP catabolic process	other metabolic processes	P	Cell division control protein 42 homolog (CDC42Sp)
ruditapes_c31536	small GTPase mediated signal transduction	signal transduction	P	Cell division control protein 42 homolog (CDC42Sp)
ruditapes_c31536	regulation of beta-glucan biosynthetic process	other metabolic processes	P	Cell division control protein 42 homolog (CDC42Sp)
ruditapes_c27416	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nitrogen regulatory protein NUT1
ruditapes_c27416	nitrate assimilation	other metabolic processes	P	Nitrogen regulatory protein NUT1
ruditapes_c27416	"transcription, DNA-dependent"	RNA metabolism	P	Nitrogen regulatory protein NUT1
ruditapes_c30673	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nitrogen regulatory protein NUT1
ruditapes_c30673	"transcription, DNA-dependent"	RNA metabolism	P	Nitrogen regulatory protein NUT1
ruditapes_c30673	nitrate assimilation	other metabolic processes	P	Nitrogen regulatory protein NUT1
ruditapes_c12444	proteolysis	protein metabolism	P	Genome polyprotein 2 [Cleaved into: Helper component proteinase (HC-pro) (EC 3.4.22.45); 70 kDa protein]
ruditapes_lrc35016	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes_lrc39442	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes_lrc35016	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes_lrc39442	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes_c3427	oxidation reduction	other metabolic processes	P	Cytochrome P450 2D14 (EC 1.14.14.1) (CYPIID14)
ruditapes_c15995	metabolic process	other metabolic processes	P	Di-N-acetylchitobiase (EC 3.2.1.-) (Fragment)
ruditapes_c15995	carbohydrate metabolic process	other metabolic processes	P	Di-N-acetylchitobiase (EC 3.2.1.-) (Fragment)
ruditapes2_c2146	oligosaccharide catabolic process	other metabolic processes	P	Di-N-acetylchitobiase (EC 3.2.1.-)
ruditapes2_c2146	chitin catabolic process	other metabolic processes	P	Di-N-acetylchitobiase (EC 3.2.1.-)
ruditapes2_c2146	carbohydrate metabolic process	other metabolic processes	P	Di-N-acetylchitobiase (EC 3.2.1.-)
ruditapes2_c2146	metabolic process	other metabolic processes	P	Di-N-acetylchitobiase (EC 3.2.1.-)
ruditapes_lrc33360	signal transduction	signal transduction	P	Ankyrin-2 (ANK-2) (Ankyrin-B) (Brain ankyrin) (Non-erythroid ankyrin)
ruditapes_lrc33360	axon guidance	developmental processes	P	Ankyrin-2 (ANK-2) (Ankyrin-B) (Brain ankyrin) (Non-erythroid ankyrin)
ruditapes_lrc33360	axon guidance	cell organization and biogenesis	P	Ankyrin-2 (ANK-2) (Ankyrin-B) (Brain ankyrin) (Non-erythroid ankyrin)
ruditapes_c13128	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c13128	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c13128	ion transport	transport	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c13128	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c13128	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c13128	transport	transport	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c13128	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c13128	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c13128	viral protein processing	protein metabolism	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c13128	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: N-terminal protease (N-pro) (EC 3.4.22.-) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Non-structural protein 2-3; Cysteine protease NS2 (EC 3.4.22.-) (Non-structural protein 2); Serine protease NS3 (EC 3.4.21.113) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); Non-structural protein 5A (NS5A); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B)]
ruditapes_c11546	GTP catabolic process	other metabolic processes	P	Interferon-induced guanylate-binding protein 1 (GTP-binding protein 1) (GBP-1) (mGBP-1) (mGBP1) (Guanine nucleotide-binding protein 1) (Interferon-gamma-inducible protein MAG-1)
ruditapes_lrc38886	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes2_lrc4730	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes_lrc35591	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes_s35756	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes2_lrc2077	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes2_lrc5064	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes2_lrc4645	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes2_lrc3935	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes_lrc36196	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes2_lrc4803	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes2_lrc3485	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes2_lrc5838	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes_lrc34417	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes2_lrc4303	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes_lrc34257	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes_lrc36770	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes_s36150	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome c oxidase subunit 6B (Cytochrome c oxidase polypeptide VIb)
ruditapes_c11542	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit alpha (PEP) (EC 2.7.7.6) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha)
ruditapes_c11542	DNA repair	stress response	P	DNA-directed RNA polymerase subunit alpha (PEP) (EC 2.7.7.6) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha)
ruditapes_c11542	DNA repair	DNA metabolism	P	DNA-directed RNA polymerase subunit alpha (PEP) (EC 2.7.7.6) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha)
ruditapes_c21568	eggshell chorion assembly	cell organization and biogenesis	P	Peroxidase (DmPO) (EC 1.11.1.7) (Chorion peroxidase)
ruditapes_c21568	oxidation reduction	other metabolic processes	P	Peroxidase (DmPO) (EC 1.11.1.7) (Chorion peroxidase)
ruditapes_c21568	"phagocytosis, engulfment"	transport	P	Peroxidase (DmPO) (EC 1.11.1.7) (Chorion peroxidase)
ruditapes_c21568	"phagocytosis, engulfment"	cell organization and biogenesis	P	Peroxidase (DmPO) (EC 1.11.1.7) (Chorion peroxidase)
ruditapes_c21568	hydrogen peroxide catabolic process	stress response	P	Peroxidase (DmPO) (EC 1.11.1.7) (Chorion peroxidase)
ruditapes_c21568	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidase (DmPO) (EC 1.11.1.7) (Chorion peroxidase)
ruditapes_c21568	response to oxidative stress	stress response	P	Peroxidase (DmPO) (EC 1.11.1.7) (Chorion peroxidase)
ruditapes_c8496	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger Y-chromosomal protein 1 (ZFY-1)
ruditapes_c8496	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger Y-chromosomal protein 1 (ZFY-1)
ruditapes_c19579	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	protein complex assembly	cell organization and biogenesis	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	negative regulation of DNA binding	other biological processes	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	negative regulation of apoptosis	death	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	negative regulation of gene expression	other metabolic processes	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	negative regulation of cell proliferation	cell cycle and proliferation	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	negative regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	negative regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	positive regulation by host of viral transcription	RNA metabolism	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	"DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator"	signal transduction	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	"DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator"	stress response	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	regulation of S phase of mitotic cell cycle	cell cycle and proliferation	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	negative regulation by host of viral transcription	RNA metabolism	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19579	positive regulation of apoptosis	death	P	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)
ruditapes_c19907	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-A) (NIA) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro); Nuclear inclusion protein B (NI-B) (NIB) (RNA-directed RNA polymerase) (EC 2.7.7.48); Capsid protein (CP) (Coat protein)] (Fragment)
ruditapes_c19907	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-A) (NIA) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro); Nuclear inclusion protein B (NI-B) (NIB) (RNA-directed RNA polymerase) (EC 2.7.7.48); Capsid protein (CP) (Coat protein)] (Fragment)
ruditapes_c19907	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-A) (NIA) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro); Nuclear inclusion protein B (NI-B) (NIB) (RNA-directed RNA polymerase) (EC 2.7.7.48); Capsid protein (CP) (Coat protein)] (Fragment)
ruditapes_c19907	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-A) (NIA) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro); Nuclear inclusion protein B (NI-B) (NIB) (RNA-directed RNA polymerase) (EC 2.7.7.48); Capsid protein (CP) (Coat protein)] (Fragment)
ruditapes_c19907	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-A) (NIA) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro); Nuclear inclusion protein B (NI-B) (NIB) (RNA-directed RNA polymerase) (EC 2.7.7.48); Capsid protein (CP) (Coat protein)] (Fragment)
ruditapes_c24340	cell differentiation	other biological processes	P	T-complex protein 11 (Testis-specific protein PBS13)
ruditapes_c24340	spermatogenesis	other biological processes	P	T-complex protein 11 (Testis-specific protein PBS13)
ruditapes_c24340	multicellular organismal development	developmental processes	P	T-complex protein 11 (Testis-specific protein PBS13)
ruditapes_c13440	biological_process	other biological processes	P	OTU domain-containing protein 4 (HIV-1-induced protein HIN-1)
ruditapes_c9825	mitochondrion inheritance	cell organization and biogenesis	P	Structural protein MDM1 (Mitochondrial distribution and morphology protein 1)
ruditapes_c9825	nuclear migration	other biological processes	P	Structural protein MDM1 (Mitochondrial distribution and morphology protein 1)
ruditapes_c9825	mitochondrion organization	cell organization and biogenesis	P	Structural protein MDM1 (Mitochondrial distribution and morphology protein 1)
ruditapes_c9825	cell communication	other biological processes	P	Structural protein MDM1 (Mitochondrial distribution and morphology protein 1)
ruditapes_c11552	protein transport	transport	P	Mitochondrial import inner membrane translocase subunit TIM44 (Inner membrane import site protein 45) (ISP45) (Membrane import machinery protein MIM44) (Mitochondrial protein import protein 1)
ruditapes_c11552	transport	transport	P	Mitochondrial import inner membrane translocase subunit TIM44 (Inner membrane import site protein 45) (ISP45) (Membrane import machinery protein MIM44) (Mitochondrial protein import protein 1)
ruditapes_c11552	protein import into mitochondrial matrix	transport	P	Mitochondrial import inner membrane translocase subunit TIM44 (Inner membrane import site protein 45) (ISP45) (Membrane import machinery protein MIM44) (Mitochondrial protein import protein 1)
ruditapes_c11552	protein import into mitochondrial matrix	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit TIM44 (Inner membrane import site protein 45) (ISP45) (Membrane import machinery protein MIM44) (Mitochondrial protein import protein 1)
ruditapes_c11552	intracellular protein transport	transport	P	Mitochondrial import inner membrane translocase subunit TIM44 (Inner membrane import site protein 45) (ISP45) (Membrane import machinery protein MIM44) (Mitochondrial protein import protein 1)
ruditapes_c19635	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_c19635	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_c19635	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_c19635	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_c19635	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c602	glycolysis	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes2_c602	glucose metabolic process	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes2_c602	oxidation reduction	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes2_c4149	thiamin biosynthetic process	other metabolic processes	P	Thiazole synthase (EC 2.8.1.10)
ruditapes_c20123	lipid glycosylation	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c20123	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c20123	cell division	other biological processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c20123	carbohydrate metabolic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c20123	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c20123	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c20123	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c20123	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c29395	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c29395	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c29395	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c29395	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c29395	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c29395	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c7687	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c19905	DNA replication	DNA metabolism	P	Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1)
ruditapes_c24353	interspecies interaction between organisms	other biological processes	P	Major capsid protein L1
ruditapes_c14621	lipid metabolic process	other metabolic processes	P	N-acylethanolamine-hydrolyzing acid amidase (EC 3.5.1.-) (Acid ceramidase-like protein) (N-acylsphingosine amidohydrolase-like) (ASAH-like protein) [Cleaved into: N-acylethanolamine-hydrolyzing acid amidase subunit alpha; N-acylethanolamine-hydrolyzing acid amidase subunit beta]
ruditapes_c14621	biological_process	other biological processes	P	N-acylethanolamine-hydrolyzing acid amidase (EC 3.5.1.-) (Acid ceramidase-like protein) (N-acylsphingosine amidohydrolase-like) (ASAH-like protein) [Cleaved into: N-acylethanolamine-hydrolyzing acid amidase subunit alpha; N-acylethanolamine-hydrolyzing acid amidase subunit beta]
ruditapes_c18774	transmembrane transport	transport	P	Ammonium transporter Rh type A (Erythrocyte membrane glycoprotein Rh50) (Erythrocyte plasma membrane 50 kDa glycoprotein) (Rh50A) (Rhesus blood group family type A glycoprotein) (Rh family type A glycoprotein) (Rh type A glycoprotein) (Rhesus blood group-associated ammonia channel) (Rhesus blood group-associated glycoprotein) (CD antigen CD241)
ruditapes_c18774	carbon dioxide transport	transport	P	Ammonium transporter Rh type A (Erythrocyte membrane glycoprotein Rh50) (Erythrocyte plasma membrane 50 kDa glycoprotein) (Rh50A) (Rhesus blood group family type A glycoprotein) (Rh family type A glycoprotein) (Rh type A glycoprotein) (Rhesus blood group-associated ammonia channel) (Rhesus blood group-associated glycoprotein) (CD antigen CD241)
ruditapes_c18774	ammonium transport	transport	P	Ammonium transporter Rh type A (Erythrocyte membrane glycoprotein Rh50) (Erythrocyte plasma membrane 50 kDa glycoprotein) (Rh50A) (Rhesus blood group family type A glycoprotein) (Rh family type A glycoprotein) (Rh type A glycoprotein) (Rhesus blood group-associated ammonia channel) (Rhesus blood group-associated glycoprotein) (CD antigen CD241)
ruditapes_c18774	transport	transport	P	Ammonium transporter Rh type A (Erythrocyte membrane glycoprotein Rh50) (Erythrocyte plasma membrane 50 kDa glycoprotein) (Rh50A) (Rhesus blood group family type A glycoprotein) (Rh family type A glycoprotein) (Rh type A glycoprotein) (Rhesus blood group-associated ammonia channel) (Rhesus blood group-associated glycoprotein) (CD antigen CD241)
ruditapes_c18774	cellular ion homeostasis	other biological processes	P	Ammonium transporter Rh type A (Erythrocyte membrane glycoprotein Rh50) (Erythrocyte plasma membrane 50 kDa glycoprotein) (Rh50A) (Rhesus blood group family type A glycoprotein) (Rh family type A glycoprotein) (Rh type A glycoprotein) (Rhesus blood group-associated ammonia channel) (Rhesus blood group-associated glycoprotein) (CD antigen CD241)
ruditapes_c14914	lipid catabolic process	other metabolic processes	P	Lipase 1 (EC 3.1.1.3) (Triacylglycerol lipase)
ruditapes_c22791	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c22791	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c22791	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c22791	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c18891	metabolic process	other metabolic processes	P	"Anthranilate phosphoribosyltransferase, chloroplastic (EC 2.4.2.18)"
ruditapes_c18891	aromatic amino acid family biosynthetic process	other metabolic processes	P	"Anthranilate phosphoribosyltransferase, chloroplastic (EC 2.4.2.18)"
ruditapes_c18891	tryptophan biosynthetic process	other metabolic processes	P	"Anthranilate phosphoribosyltransferase, chloroplastic (EC 2.4.2.18)"
ruditapes_c18891	cellular amino acid biosynthetic process	other metabolic processes	P	"Anthranilate phosphoribosyltransferase, chloroplastic (EC 2.4.2.18)"
ruditapes_c16069	protein-phycocyanobilin linkage	protein metabolism	P	Chromophore lyase CpcS/CpeS (EC 4.-.-.-) (ORF200)
ruditapes_lrc34835	generation of precursor metabolites and energy	other metabolic processes	P	"Cytochrome c oxidase subunit 6A2, mitochondrial (Cytochrome c oxidase polypeptide VIa-heart) (COXVIAH) (Cytochrome c oxidase subunit VIA-muscle) (COX VIa-M)"
ruditapes_c13077	courtship behavior	other biological processes	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	regulation of heart contraction	other biological processes	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	flight behavior	other biological processes	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	behavioral response to ether	other biological processes	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	signal transduction	signal transduction	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	learning or memory	other biological processes	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	two-component signal transduction system (phosphorelay)	signal transduction	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	learning	other biological processes	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	transport	transport	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	multicellular organismal development	developmental processes	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	transmembrane transport	transport	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	potassium ion transport	transport	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	ion transport	transport	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	perineurial glial growth	developmental processes	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	cell differentiation	other biological processes	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	regulation of transmembrane ion transport	transport	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	sensory perception of smell	other biological processes	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c13077	nervous system development	developmental processes	P	Potassium voltage-gated channel protein eag (Ether-a-go-go protein)
ruditapes_c11402	response to starvation	stress response	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	liver development	developmental processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	oxidation reduction	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	metabolic process	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	response to corticosterone stimulus	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	adipose tissue development	developmental processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	response to cadmium ion	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	response to ethanol	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	response to growth hormone stimulus	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	response to estradiol stimulus	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	response to insulin stimulus	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	cellular lipid metabolic process	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	response to drug	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	cellular lipid metabolic process	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	response to corticosterone stimulus	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	response to growth hormone stimulus	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	cellular ketone body metabolic process	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	cellular ketone body metabolic process	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	adipose tissue development	developmental processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	response to cadmium ion	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	ketone body biosynthetic process	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	brain development	developmental processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	response to hormone stimulus	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	response to starvation	stress response	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	oxidation reduction	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	metabolic process	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	response to toxin	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	response to nutrient	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	ketone body catabolic process	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	response to toxin	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	response to hormone stimulus	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	response to insulin stimulus	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	brain development	developmental processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	liver development	developmental processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	response to ethanol	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	response to drug	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c11402	ketone body catabolic process	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	response to estradiol stimulus	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	response to nutrient	other biological processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c24766	ketone body biosynthetic process	other metabolic processes	P	"D-beta-hydroxybutyrate dehydrogenase, mitochondrial (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase)"
ruditapes_c12620	"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 6 (U3 snoRNA-associated protein 6) (U three protein 6)
ruditapes_c12620	"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 6 (U3 snoRNA-associated protein 6) (U three protein 6)
ruditapes_c12620	RNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 6 (U3 snoRNA-associated protein 6) (U three protein 6)
ruditapes_c12620	"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 6 (U3 snoRNA-associated protein 6) (U three protein 6)
ruditapes_c12620	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 6 (U3 snoRNA-associated protein 6) (U three protein 6)
ruditapes_c12620	"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	U3 small nucleolar RNA-associated protein 6 (U3 snoRNA-associated protein 6) (U three protein 6)
ruditapes_c12620	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 6 (U3 snoRNA-associated protein 6) (U three protein 6)
ruditapes_lrc24174	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit)
ruditapes_lrc23729	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit)
ruditapes2_c60	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit)
ruditapes2_c946	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit)
ruditapes2_c946	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit)
ruditapes_lrc38975	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit)
ruditapes_lrc38975	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit)
ruditapes_lrc24174	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit)
ruditapes2_c60	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit)
ruditapes_lrc23729	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit)
ruditapes_c26667	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Complex I-B8) (CI-B8) (NADH-ubiquinone oxidoreductase B8 subunit)
ruditapes_c26667	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Complex I-B8) (CI-B8) (NADH-ubiquinone oxidoreductase B8 subunit)
ruditapes_c3253	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c3253	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c3586	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c3586	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c3253	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_c3586	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (Complex I-ASHI) (CI-ASHI) (NADH-ubiquinone oxidoreductase ASHI subunit)"
ruditapes_s35432	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s37059	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s35432	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_lrc36265	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_lrc36265	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s37059	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_c47	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes2_c47	brain development	developmental processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes2_c47	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes2_c47	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes2_c47	response to cAMP	other biological processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes2_c47	regulation of protein amino acid phosphorylation	protein metabolism	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes2_c47	cAMP-mediated signaling	signal transduction	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes2_c47	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes2_c47	positive regulation of fibroblast proliferation	cell cycle and proliferation	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes2_c47	cellular respiration	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes_lrc36412	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes2_lrc3176	transport	transport	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_c4416	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes2_lrc3176	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc32691	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc38390	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc38390	transport	transport	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc35905	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_s35391	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_c4416	transport	transport	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc36511	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc36412	transport	transport	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_c4416	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_s35391	transport	transport	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc38390	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc36207	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc36412	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes2_lrc3176	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc36207	transport	transport	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc32691	transport	transport	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc32691	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc36207	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc35905	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc35905	transport	transport	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc36511	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_lrc36511	transport	transport	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes_s35391	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit)
ruditapes2_lrc4513	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_lrc4513	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_c14190	response to nickel ion	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	response to starvation	stress response	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	response to organic substance	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	response to hormone stimulus	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	metabolic process	other metabolic processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	response to sucrose stimulus	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	response to drug	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	response to estrogen stimulus	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	carbohydrate metabolic process	other metabolic processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	response to lead ion	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	response to nutrient	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	response to hypoxia	stress response	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c14190	response to ethanol	other biological processes	P	Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
ruditapes_c26167	mRNA processing	RNA metabolism	P	RNA-binding protein 1
ruditapes_c26167	"nuclear mRNA cis splicing, via spliceosome"	RNA metabolism	P	RNA-binding protein 1
ruditapes_c26167	RNA splicing	RNA metabolism	P	RNA-binding protein 1
ruditapes2_c4553	cell cycle	cell cycle and proliferation	P	Protein TBF1 (TBF-alpha) (TTAGGG repeat-binding factor 1)
ruditapes2_c4553	telomere maintenance via telomere lengthening	DNA metabolism	P	Protein TBF1 (TBF-alpha) (TTAGGG repeat-binding factor 1)
ruditapes2_c4553	telomere maintenance via telomere lengthening	cell organization and biogenesis	P	Protein TBF1 (TBF-alpha) (TTAGGG repeat-binding factor 1)
ruditapes2_c4553	negative regulation of telomere maintenance via telomerase	DNA metabolism	P	Protein TBF1 (TBF-alpha) (TTAGGG repeat-binding factor 1)
ruditapes2_c4553	negative regulation of telomere maintenance via telomerase	cell organization and biogenesis	P	Protein TBF1 (TBF-alpha) (TTAGGG repeat-binding factor 1)
ruditapes2_c4553	negative regulation of chromatin silencing	RNA metabolism	P	Protein TBF1 (TBF-alpha) (TTAGGG repeat-binding factor 1)
ruditapes2_c4553	negative regulation of chromatin silencing	cell organization and biogenesis	P	Protein TBF1 (TBF-alpha) (TTAGGG repeat-binding factor 1)
ruditapes2_c4553	"transcription, DNA-dependent"	RNA metabolism	P	Protein TBF1 (TBF-alpha) (TTAGGG repeat-binding factor 1)
ruditapes2_c4553	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein TBF1 (TBF-alpha) (TTAGGG repeat-binding factor 1)
ruditapes_c14524	phosphorylation	other metabolic processes	P	Putative sensor protein Sfri
ruditapes_c14524	transport	transport	P	Putative sensor protein Sfri
ruditapes_c14524	two-component signal transduction system (phosphorelay)	signal transduction	P	Putative sensor protein Sfri
ruditapes_c14524	signal transduction	signal transduction	P	Putative sensor protein Sfri
ruditapes_c14524	peptidyl-histidine phosphorylation	protein metabolism	P	Putative sensor protein Sfri
ruditapes_c14529	phospholipid metabolic process	other metabolic processes	P	Otoconin-90 (Oc90) (Phospholipase A2 homolog)
ruditapes_c14529	biological_process	other biological processes	P	Otoconin-90 (Oc90) (Phospholipase A2 homolog)
ruditapes_c14529	lipid catabolic process	other metabolic processes	P	Otoconin-90 (Oc90) (Phospholipase A2 homolog)
ruditapes_lrc32869	translational initiation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34074	translational initiation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33749	translational elongation	protein metabolism	P	60S ribosomal protein L18a
ruditapes2_c4621	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32108	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33106	viral transcription	RNA metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	translational initiation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32784	translational termination	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32784	translational termination	cell organization and biogenesis	P	60S ribosomal protein L18a
ruditapes_lrc32784	translational elongation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32108	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L18a
ruditapes_lrc32869	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34295	viral infectious cycle	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc33749	viral reproduction	other biological processes	P	60S ribosomal protein L18a
ruditapes2_c4621	viral transcription	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33106	translational elongation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34295	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32869	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L18a
ruditapes_lrc32108	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33749	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L18a
ruditapes2_c4621	translational elongation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32108	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33749	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34074	viral infectious cycle	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc32869	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32784	viral reproduction	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc34295	translational termination	cell organization and biogenesis	P	60S ribosomal protein L18a
ruditapes_lrc33106	translational termination	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33106	translational termination	cell organization and biogenesis	P	60S ribosomal protein L18a
ruditapes_lrc33106	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34074	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32108	viral transcription	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32869	viral infectious cycle	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc32784	viral transcription	RNA metabolism	P	60S ribosomal protein L18a
ruditapes2_c4621	viral reproduction	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc34295	translational termination	protein metabolism	P	60S ribosomal protein L18a
ruditapes2_c4621	translational termination	cell organization and biogenesis	P	60S ribosomal protein L18a
ruditapes_lrc34074	viral transcription	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34074	translation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34074	gene expression	other metabolic processes	P	60S ribosomal protein L18a
ruditapes_lrc34295	translational elongation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33106	viral reproduction	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc32108	viral reproduction	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc32869	translational elongation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32108	translational termination	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32108	translational termination	cell organization and biogenesis	P	60S ribosomal protein L18a
ruditapes_lrc33749	translational initiation	protein metabolism	P	60S ribosomal protein L18a
ruditapes2_c4621	translational termination	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32869	translational termination	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32869	translational termination	cell organization and biogenesis	P	60S ribosomal protein L18a
ruditapes2_c4621	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32784	translational initiation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32108	translational elongation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33749	translation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34074	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	translation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34074	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L18a
ruditapes_lrc32869	viral reproduction	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc34074	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	gene expression	other metabolic processes	P	60S ribosomal protein L18a
ruditapes_lrc34295	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L18a
ruditapes2_c4621	translational initiation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32869	viral transcription	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32108	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34295	viral transcription	RNA metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33106	translational initiation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33749	gene expression	other metabolic processes	P	60S ribosomal protein L18a
ruditapes_lrc32784	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34295	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32784	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	viral infectious cycle	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc32784	gene expression	other metabolic processes	P	60S ribosomal protein L18a
ruditapes_lrc34074	translational elongation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33749	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33106	translation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34295	translational initiation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32784	translation	protein metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	viral transcription	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34295	viral reproduction	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc32108	translational initiation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34074	translational termination	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34074	translational termination	cell organization and biogenesis	P	60S ribosomal protein L18a
ruditapes_lrc34295	gene expression	other metabolic processes	P	60S ribosomal protein L18a
ruditapes_lrc34295	translation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32869	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33106	gene expression	other metabolic processes	P	60S ribosomal protein L18a
ruditapes_lrc33749	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L18a
ruditapes2_c4621	gene expression	other metabolic processes	P	60S ribosomal protein L18a
ruditapes2_c4621	translation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34295	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33749	viral infectious cycle	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc34074	viral reproduction	other biological processes	P	60S ribosomal protein L18a
ruditapes2_c4972	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc34074	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L18a
ruditapes_lrc34295	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	viral reproduction	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc33106	viral infectious cycle	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc32869	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L18a
ruditapes2_c4621	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32869	translation	protein metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33106	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes2_c4621	viral infectious cycle	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc33749	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L18a
ruditapes2_c4621	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L18a
ruditapes_lrc32869	gene expression	other metabolic processes	P	60S ribosomal protein L18a
ruditapes_lrc33749	viral transcription	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32784	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33106	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32784	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32108	translation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32108	gene expression	other metabolic processes	P	60S ribosomal protein L18a
ruditapes2_c4621	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L18a
ruditapes_lrc32108	viral infectious cycle	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc32784	viral infectious cycle	other biological processes	P	60S ribosomal protein L18a
ruditapes_lrc32784	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L18a
ruditapes_lrc33106	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L18a
ruditapes_lrc33106	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	translational termination	protein metabolism	P	60S ribosomal protein L18a
ruditapes2_c4972	translational termination	cell organization and biogenesis	P	60S ribosomal protein L18a
ruditapes2_c4972	translational elongation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33749	translational termination	protein metabolism	P	60S ribosomal protein L18a
ruditapes_lrc33749	translational termination	cell organization and biogenesis	P	60S ribosomal protein L18a
ruditapes_c23134	ATP catabolic process	other metabolic processes	P	Heavy metal tolerance protein
ruditapes_c23134	transport	transport	P	Heavy metal tolerance protein
ruditapes_c23134	transmembrane cadmium ion transport	transport	P	Heavy metal tolerance protein
ruditapes_c23134	response to cadmium ion	other biological processes	P	Heavy metal tolerance protein
ruditapes_c23134	transmembrane transport	transport	P	Heavy metal tolerance protein
ruditapes_c14593	biosynthetic process	other metabolic processes	P	Aspartate aminotransferase A (AspAT) (EC 2.6.1.1) (Transaminase A)
ruditapes_c14593	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	Aspartate aminotransferase A (AspAT) (EC 2.6.1.1) (Transaminase A)
ruditapes_c28314	ascospore-type prospore membrane formation	cell organization and biogenesis	P	Spore membrane assembly protein 1
ruditapes_c28314	sporulation resulting in formation of a cellular spore	other biological processes	P	Spore membrane assembly protein 1
ruditapes_lrc37810	translation	protein metabolism	P	60S ribosomal protein L21-A
ruditapes_c17322	translation	protein metabolism	P	60S ribosomal protein L21-A
ruditapes_c5511	protein deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c5511	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c5511	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c14038	"regulation of alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	DNA excision repair protein haywire (EC 3.6.4.12) (ATP-dependent DNA helicase hay) (ERCC-3 homolog protein) (ERCC3Dm)
ruditapes_c14038	nucleotide-excision repair	stress response	P	DNA excision repair protein haywire (EC 3.6.4.12) (ATP-dependent DNA helicase hay) (ERCC-3 homolog protein) (ERCC3Dm)
ruditapes_c14038	response to DNA damage stimulus	stress response	P	DNA excision repair protein haywire (EC 3.6.4.12) (ATP-dependent DNA helicase hay) (ERCC-3 homolog protein) (ERCC3Dm)
ruditapes_c14038	DNA repair	stress response	P	DNA excision repair protein haywire (EC 3.6.4.12) (ATP-dependent DNA helicase hay) (ERCC-3 homolog protein) (ERCC3Dm)
ruditapes_c14038	DNA repair	DNA metabolism	P	DNA excision repair protein haywire (EC 3.6.4.12) (ATP-dependent DNA helicase hay) (ERCC-3 homolog protein) (ERCC3Dm)
ruditapes_c14038	nucleotide-excision repair	DNA metabolism	P	DNA excision repair protein haywire (EC 3.6.4.12) (ATP-dependent DNA helicase hay) (ERCC-3 homolog protein) (ERCC3Dm)
ruditapes_c14038	response to UV	other biological processes	P	DNA excision repair protein haywire (EC 3.6.4.12) (ATP-dependent DNA helicase hay) (ERCC-3 homolog protein) (ERCC3Dm)
ruditapes_c14038	adult locomotory behavior	other biological processes	P	DNA excision repair protein haywire (EC 3.6.4.12) (ATP-dependent DNA helicase hay) (ERCC-3 homolog protein) (ERCC3Dm)
ruditapes_c3724	transport	transport	P	Early nodulin-70 (N-70)
ruditapes_c3724	nodulation	other biological processes	P	Early nodulin-70 (N-70)
ruditapes_c3724	sulfate transport	transport	P	Early nodulin-70 (N-70)
ruditapes_c3724	transmembrane transport	transport	P	Early nodulin-70 (N-70)
ruditapes_lrc32974	multicellular organismal development	developmental processes	P	Ribonucleoprotein RB97D
ruditapes_lrc32974	spermatid development	other biological processes	P	Ribonucleoprotein RB97D
ruditapes_lrc32974	spermatogenesis	other biological processes	P	Ribonucleoprotein RB97D
ruditapes_lrc32974	cell differentiation	other biological processes	P	Ribonucleoprotein RB97D
ruditapes2_c1026	negative regulation of gene expression	other metabolic processes	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	negative regulation of apoptosis	death	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	inflammatory response	stress response	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	"negative regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	positive chemotaxis	other biological processes	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	positive regulation of phosphorylation	other metabolic processes	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	"negative regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	positive regulation of fibroblast proliferation	cell cycle and proliferation	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	positive regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	protein homotrimerization	cell organization and biogenesis	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	positive regulation of protein kinase A signaling cascade	signal transduction	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	carboxylic acid metabolic process	other metabolic processes	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	prostaglandin biosynthetic process	other metabolic processes	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	positive regulation of B cell proliferation	cell cycle and proliferation	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	positive regulation of cytokine secretion	transport	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	cell proliferation	cell cycle and proliferation	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	positive regulation of ERK1 and ERK2 cascade	signal transduction	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	cell surface receptor linked signal transduction	signal transduction	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes2_c1026	innate immune response	stress response	P	Macrophage migration inhibitory factor (MIF) (EC 5.3.2.1) (L-dopachrome isomerase) (L-dopachrome tautomerase) (EC 5.3.3.12) (Phenylpyruvate tautomerase)
ruditapes_c25919	phosphorylation	other metabolic processes	P	Proto-oncogene tyrosine-protein kinase Yrk (EC 2.7.10.2) (Yes-related kinase) (p60-Yrk)
ruditapes_c25919	protein amino acid phosphorylation	protein metabolism	P	Proto-oncogene tyrosine-protein kinase Yrk (EC 2.7.10.2) (Yes-related kinase) (p60-Yrk)
ruditapes_c21015	cytoplasmic microtubule organization	cell organization and biogenesis	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	microtubule cytoskeleton organization	cell organization and biogenesis	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	cell motility	other biological processes	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	hemidesmosome assembly	cell organization and biogenesis	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	intracellular transport	transport	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	cell cycle arrest	cell cycle and proliferation	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	integrin-mediated signaling pathway	signal transduction	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	cell adhesion	cell adhesion	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	cytoskeleton organization	cell organization and biogenesis	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	regulation of microtubule polymerization or depolymerization	cell organization and biogenesis	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	retrograde axon cargo transport	transport	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	maintenance of cell polarity	cell organization and biogenesis	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	response to wounding	stress response	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	axonogenesis	developmental processes	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	axonogenesis	cell organization and biogenesis	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c21015	intermediate filament cytoskeleton organization	cell organization and biogenesis	P	Dystonin (230 kDa bullous pemphigoid antigen) (230/240 kDa bullous pemphigoid antigen) (Bullous pemphigoid antigen 1) (BPA) (Bullous pemphigoid antigen) (Dystonia musculorum protein) (Hemidesmosomal plaque protein)
ruditapes_c22974	phosphorylation	other metabolic processes	P	"cGMP-dependent protein kinase, isozyme 1 (cGK) (EC 2.7.11.12)"
ruditapes_c22974	protein amino acid phosphorylation	protein metabolism	P	"cGMP-dependent protein kinase, isozyme 1 (cGK) (EC 2.7.11.12)"
ruditapes_c21364	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c21364	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c21364	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c21364	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c21364	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c21364	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c21364	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c21364	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c21364	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c21364	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Picornain 2A (P2A) (Protein 2A) (EC 3.4.22.29); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c20407	glial cell fate commitment	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	cell adhesion	cell adhesion	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	auditory receptor cell fate determination	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	neural tube development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	auditory receptor cell differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	myelination in the central nervous system	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	radial glial cell differentiation in the forebrain	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	cell maturation	other biological processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	astrocyte differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	regulation of myelination	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	camera-type eye development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	negative regulation of neuron differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	multicellular organismal development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	oligodendrocyte development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	positive regulation of Notch signaling pathway	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	regulation of neurogenesis	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	positive regulation of cell proliferation	cell cycle and proliferation	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	positive regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	neuron differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	positive regulation of tyrosine phosphorylation of Stat3 protein	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	positive regulation of tyrosine phosphorylation of Stat3 protein	protein metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	positive regulation of JAK-STAT cascade	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	regulation of cell differentiation	other biological processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	positive regulation of BMP signaling pathway	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	Notch signaling pathway	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	nervous system development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	cell differentiation	other biological processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	negative regulation of oligodendrocyte differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	cartilage development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	brain development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	protein complex assembly	cell organization and biogenesis	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	chondrocyte differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	negative regulation of astrocyte differentiation	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	smoothened signaling pathway	signal transduction	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c20407	telencephalon development	developmental processes	P	Transcription factor HES-5 (Hairy and enhancer of split 5)
ruditapes_c15804	organic anion transport	transport	P	Monocarboxylate transporter 1 (MCT 1) (Solute carrier family 16 member 1)
ruditapes_c15804	transport	transport	P	Monocarboxylate transporter 1 (MCT 1) (Solute carrier family 16 member 1)
ruditapes_c15804	transmembrane transport	transport	P	Monocarboxylate transporter 1 (MCT 1) (Solute carrier family 16 member 1)
ruditapes_c20656	deoxyribonucleoside triphosphate metabolic process	other metabolic processes	P	Oxidoreductase-like protein SRL4 (Suppressor of RAD53 and LCD1 4) (Suppressor of RAD53 null lethality 4)
ruditapes_c9826	oxidation reduction	other metabolic processes	P	Styryl dye vacuolar localization protein 3
ruditapes_c9826	endocytosis	transport	P	Styryl dye vacuolar localization protein 3
ruditapes_c9826	endocytosis	cell organization and biogenesis	P	Styryl dye vacuolar localization protein 3
ruditapes_c18620	regulation of lateral pseudopodium assembly	cell organization and biogenesis	P	"Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c18620	regulation of cell shape	cell organization and biogenesis	P	"Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c18620	sporulation resulting in formation of a cellular spore	other biological processes	P	"Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c18620	regulation of chemotaxis	other biological processes	P	"Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c18620	cyclic nucleotide biosynthetic process	other metabolic processes	P	"Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c18620	actin filament organization	cell organization and biogenesis	P	"Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c18620	cAMP biosynthetic process	other metabolic processes	P	"Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c18620	aggregation involved in sorocarp development	stress response	P	"Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c18620	aggregation involved in sorocarp development	developmental processes	P	"Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes2_c865	proton transport	transport	P	V-type proton ATPase 16 kDa proteolipid subunit (V-ATPase 16 kDa proteolipid subunit) (15 kDa mediatophore protein) (Vacuolar proton pump 16 kDa proteolipid subunit)
ruditapes2_c865	transport	transport	P	V-type proton ATPase 16 kDa proteolipid subunit (V-ATPase 16 kDa proteolipid subunit) (15 kDa mediatophore protein) (Vacuolar proton pump 16 kDa proteolipid subunit)
ruditapes2_c865	ion transport	transport	P	V-type proton ATPase 16 kDa proteolipid subunit (V-ATPase 16 kDa proteolipid subunit) (15 kDa mediatophore protein) (Vacuolar proton pump 16 kDa proteolipid subunit)
ruditapes2_c865	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase 16 kDa proteolipid subunit (V-ATPase 16 kDa proteolipid subunit) (15 kDa mediatophore protein) (Vacuolar proton pump 16 kDa proteolipid subunit)
ruditapes_c7508	thiamin biosynthetic process	other metabolic processes	P	Probable glutamine amidotransferase SNO1 (EC 2.6.-.-)
ruditapes_c7508	anti-apoptosis	death	P	Probable glutamine amidotransferase SNO1 (EC 2.6.-.-)
ruditapes_c7508	pyridoxine metabolic process	other metabolic processes	P	Probable glutamine amidotransferase SNO1 (EC 2.6.-.-)
ruditapes_c7508	pyridoxine biosynthetic process	other metabolic processes	P	Probable glutamine amidotransferase SNO1 (EC 2.6.-.-)
ruditapes_c7508	glutamine metabolic process	other metabolic processes	P	Probable glutamine amidotransferase SNO1 (EC 2.6.-.-)
ruditapes_c27933	regulation of cell growth	other biological processes	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	peptidyl-tyrosine phosphorylation	protein metabolism	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	skin development	developmental processes	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	protein amino acid phosphorylation	protein metabolism	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	negative regulation of cell proliferation	cell cycle and proliferation	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	phosphorylation	other metabolic processes	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	ear development	developmental processes	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	regulation of cell-matrix adhesion	cell adhesion	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	embryo implantation	developmental processes	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	branching involved in mammary gland duct morphogenesis	developmental processes	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	organ regeneration	developmental processes	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c27933	cell adhesion	cell adhesion	P	Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
ruditapes_c1124	mitochondrial proton-transporting ATP synthase complex assembly	cell organization and biogenesis	P	"ATPase synthesis protein 25, mitochondrial (OLI1 mRNA stabilization factor)"
ruditapes_c1124	mRNA stabilization	RNA metabolism	P	"ATPase synthesis protein 25, mitochondrial (OLI1 mRNA stabilization factor)"
ruditapes_c9379	isoprenoid biosynthetic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c9379	coenzyme A metabolic process	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c9379	oxidation reduction	other metabolic processes	P	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)
ruditapes_c3716	cell growth	other biological processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	heart morphogenesis	developmental processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	cell migration	other biological processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	response to follicle-stimulating hormone stimulus	other biological processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	epithelial to mesenchymal transition	cell organization and biogenesis	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	ventricular cardiac muscle morphogenesis	developmental processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	negative regulation of cell motion	other biological processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	liver development	developmental processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	cardiac muscle cell proliferation	cell cycle and proliferation	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	cardiac muscle cell proliferation	developmental processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	protein kinase cascade	signal transduction	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	definitive erythrocyte differentiation	developmental processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	response to prostaglandin E stimulus	other biological processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	epithelial to mesenchymal transition	developmental processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	transforming growth factor beta receptor signaling pathway	signal transduction	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	cardiac epithelial to mesenchymal transition	developmental processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	cardiac epithelial to mesenchymal transition	cell organization and biogenesis	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	heart trabecula formation	developmental processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	BMP signaling pathway	signal transduction	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	pathway-restricted SMAD protein phosphorylation	signal transduction	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	pathway-restricted SMAD protein phosphorylation	protein metabolism	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	negative regulation of epithelial cell proliferation	cell cycle and proliferation	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	palate development	other biological processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	immune response	other biological processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	response to luteinizing hormone stimulus	other biological processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c3716	definitive hemopoiesis	developmental processes	P	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)
ruditapes_c5247	proteolysis	protein metabolism	P	Lysosomal aspartic protease (EC 3.4.23.-)
ruditapes2_c128	proteolysis	protein metabolism	P	Lysosomal aspartic protease (EC 3.4.23.-)
ruditapes_c2466	angiogenesis	developmental processes	P	Tumor necrosis factor alpha-induced protein 2 (TNF alpha-induced protein 2) (Primary response gene B94 protein)
ruditapes_c2466	cell differentiation	other biological processes	P	Tumor necrosis factor alpha-induced protein 2 (TNF alpha-induced protein 2) (Primary response gene B94 protein)
ruditapes_c2466	multicellular organismal development	developmental processes	P	Tumor necrosis factor alpha-induced protein 2 (TNF alpha-induced protein 2) (Primary response gene B94 protein)
ruditapes_c28391	nervous system development	developmental processes	P	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1)
ruditapes_c28391	intracellular transport	transport	P	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1)
ruditapes_c28391	neural tube closure	developmental processes	P	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1)
ruditapes_c28391	actin filament organization	cell organization and biogenesis	P	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1)
ruditapes_c28391	multicellular organismal development	developmental processes	P	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1)
ruditapes_c28391	actin polymerization or depolymerization	cell organization and biogenesis	P	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1)
ruditapes_c28391	cell differentiation	other biological processes	P	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1)
ruditapes_c28391	cell motion	other biological processes	P	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1)
ruditapes_c28391	actin cytoskeleton organization	cell organization and biogenesis	P	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1)
ruditapes_c28391	axon guidance	developmental processes	P	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1)
ruditapes_c28391	axon guidance	cell organization and biogenesis	P	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1)
ruditapes_c17680	translation	protein metabolism	P	"37S ribosomal protein S10, mitochondrial"
ruditapes_c17680	mitochondrial translation	protein metabolism	P	"37S ribosomal protein S10, mitochondrial"
ruditapes_c17680	mitochondrial translation	cell organization and biogenesis	P	"37S ribosomal protein S10, mitochondrial"
ruditapes_c29561	transport	transport	P	Uncharacterized transporter YMR279C
ruditapes_c29561	transmembrane transport	transport	P	Uncharacterized transporter YMR279C
ruditapes_c14835	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R1 (Retrovirus-related Pol polyprotein from type I retrotransposable element R1) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease] (Fragment)
ruditapes_c30227	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R1 2 (Retrovirus-related Pol polyprotein from type I retrotransposable element R1 2) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease] (Fragment)
ruditapes_c25255	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Retrovirus-related Pol polyprotein from type I retrotransposable element R2) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease] (Fragment)
ruditapes2_c630	nucleus organization	cell organization and biogenesis	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	mRNA transport	transport	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	nucleocytoplasmic transport	transport	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	transport	transport	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	cell cycle	cell cycle and proliferation	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	rRNA processing	RNA metabolism	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	protein modification process	protein metabolism	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	regulation of cell size	other biological processes	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	mitosis	cell cycle and proliferation	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	mitosis	cell organization and biogenesis	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes2_c630	"cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	E3 ubiquitin-protein ligase TOM1 (EC 6.3.2.-) (Suppressor of snRNA protein 2) (Temperature-dependent organization in mitotic nucleus protein 1)
ruditapes_c18288	cell cycle	cell cycle and proliferation	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes_c18288	nucleotide-excision repair	stress response	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes_c18288	nucleotide-excision repair	DNA metabolism	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes_c18288	transcription from RNA polymerase II promoter	RNA metabolism	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes_c18288	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes_c18288	"transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes_c26407	intracellular protein transport	transport	P	Vacuolar protein sorting-associated protein 16 (Vacuolar morphogenesis protein 9) (Vacuolar protein-targeting protein 16)
ruditapes_c26407	vacuole organization	cell organization and biogenesis	P	Vacuolar protein sorting-associated protein 16 (Vacuolar morphogenesis protein 9) (Vacuolar protein-targeting protein 16)
ruditapes_c26407	"regulation of vacuole fusion, non-autophagic"	cell organization and biogenesis	P	Vacuolar protein sorting-associated protein 16 (Vacuolar morphogenesis protein 9) (Vacuolar protein-targeting protein 16)
ruditapes_c26407	protein transport	transport	P	Vacuolar protein sorting-associated protein 16 (Vacuolar morphogenesis protein 9) (Vacuolar protein-targeting protein 16)
ruditapes_c26407	Golgi to endosome transport	transport	P	Vacuolar protein sorting-associated protein 16 (Vacuolar morphogenesis protein 9) (Vacuolar protein-targeting protein 16)
ruditapes_c26407	late endosome to vacuole transport	transport	P	Vacuolar protein sorting-associated protein 16 (Vacuolar morphogenesis protein 9) (Vacuolar protein-targeting protein 16)
ruditapes_c26407	"vacuole fusion, non-autophagic"	cell organization and biogenesis	P	Vacuolar protein sorting-associated protein 16 (Vacuolar morphogenesis protein 9) (Vacuolar protein-targeting protein 16)
ruditapes_c26407	transport	transport	P	Vacuolar protein sorting-associated protein 16 (Vacuolar morphogenesis protein 9) (Vacuolar protein-targeting protein 16)
ruditapes_c26407	protein targeting to vacuole	transport	P	Vacuolar protein sorting-associated protein 16 (Vacuolar morphogenesis protein 9) (Vacuolar protein-targeting protein 16)
ruditapes2_c370	mitochondrial protein processing during import	transport	P	Mitochondrial-processing peptidase subunit beta (EC 3.4.24.64) (Beta-MPP) (P-52)
ruditapes2_c370	mitochondrial protein processing during import	protein metabolism	P	Mitochondrial-processing peptidase subunit beta (EC 3.4.24.64) (Beta-MPP) (P-52)
ruditapes2_c370	mitochondrial protein processing during import	cell organization and biogenesis	P	Mitochondrial-processing peptidase subunit beta (EC 3.4.24.64) (Beta-MPP) (P-52)
ruditapes2_c370	proteolysis	protein metabolism	P	Mitochondrial-processing peptidase subunit beta (EC 3.4.24.64) (Beta-MPP) (P-52)
ruditapes_c21754	cell adhesion	cell adhesion	P	Thrombospondin-2
ruditapes_c21754	negative regulation of angiogenesis	developmental processes	P	Thrombospondin-2
ruditapes_c21754	positive regulation of synaptogenesis	developmental processes	P	Thrombospondin-2
ruditapes_c21754	positive regulation of synaptogenesis	cell organization and biogenesis	P	Thrombospondin-2
ruditapes_c21754	positive regulation of synaptogenesis	cell-cell signaling	P	Thrombospondin-2
ruditapes_c10719	ion transport	transport	P	Innexin unc-7 (Uncoordinated protein 7)
ruditapes_c10719	gap junction assembly	cell organization and biogenesis	P	Innexin unc-7 (Uncoordinated protein 7)
ruditapes_c10719	transport	transport	P	Innexin unc-7 (Uncoordinated protein 7)
ruditapes_c10719	response to chemical stimulus	other biological processes	P	Innexin unc-7 (Uncoordinated protein 7)
ruditapes_c10719	locomotion	other biological processes	P	Innexin unc-7 (Uncoordinated protein 7)
ruditapes_c10719	oviposition	other biological processes	P	Innexin unc-7 (Uncoordinated protein 7)
ruditapes_c10719	regulation of pharyngeal pumping	other biological processes	P	Innexin unc-7 (Uncoordinated protein 7)
ruditapes_c7314	cellular lipid metabolic process	other metabolic processes	P	ADIPOR-like receptor IZH1 (Implicated in zinc homeostasis protein 1)
ruditapes_c7314	cellular zinc ion homeostasis	other biological processes	P	ADIPOR-like receptor IZH1 (Implicated in zinc homeostasis protein 1)
ruditapes2_c1545	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Protein EBS1 (EST1-like BCY1 suppressor 1)
ruditapes2_c1545	negative regulation of translation	protein metabolism	P	Protein EBS1 (EST1-like BCY1 suppressor 1)
ruditapes_c21044	protein homooligomerization	cell organization and biogenesis	P	Gephyrin (Putative glycine receptor-tubulin linker protein) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c21044	synaptogenesis	developmental processes	P	Gephyrin (Putative glycine receptor-tubulin linker protein) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c21044	synaptogenesis	cell organization and biogenesis	P	Gephyrin (Putative glycine receptor-tubulin linker protein) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c21044	molybdopterin cofactor biosynthetic process	protein metabolism	P	Gephyrin (Putative glycine receptor-tubulin linker protein) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c21044	protein targeting	transport	P	Gephyrin (Putative glycine receptor-tubulin linker protein) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c21044	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Gephyrin (Putative glycine receptor-tubulin linker protein) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c21044	metabolic process	other metabolic processes	P	Gephyrin (Putative glycine receptor-tubulin linker protein) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c21044	establishment of protein localization	other biological processes	P	Gephyrin (Putative glycine receptor-tubulin linker protein) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c9272	embryonic development ending in birth or egg hatching	developmental processes	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c9272	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c9272	nematode larval development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c9272	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c9272	body morphogenesis	other biological processes	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c9272	reproduction	other biological processes	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c9272	positive regulation of growth rate	other biological processes	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c9272	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c9272	gamete generation	other biological processes	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c9272	growth	other biological processes	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes2_c3684	mesodermal cell migration	developmental processes	P	Integrin alpha ina-1
ruditapes2_c3684	hermaphrodite genitalia development	developmental processes	P	Integrin alpha ina-1
ruditapes2_c3684	receptor-mediated endocytosis	transport	P	Integrin alpha ina-1
ruditapes2_c3684	receptor-mediated endocytosis	cell organization and biogenesis	P	Integrin alpha ina-1
ruditapes2_c3684	locomotion	other biological processes	P	Integrin alpha ina-1
ruditapes2_c3684	body morphogenesis	other biological processes	P	Integrin alpha ina-1
ruditapes2_c3684	neuron migration	developmental processes	P	Integrin alpha ina-1
ruditapes2_c3684	cell adhesion	cell adhesion	P	Integrin alpha ina-1
ruditapes2_c3684	integrin-mediated signaling pathway	signal transduction	P	Integrin alpha ina-1
ruditapes2_c3684	inductive cell migration	other biological processes	P	Integrin alpha ina-1
ruditapes2_c3684	morphogenesis of an epithelium	developmental processes	P	Integrin alpha ina-1
ruditapes2_c3684	nematode larval development	developmental processes	P	Integrin alpha ina-1
ruditapes2_c3684	axonal fasciculation	developmental processes	P	Integrin alpha ina-1
ruditapes2_c3684	axonal fasciculation	cell organization and biogenesis	P	Integrin alpha ina-1
ruditapes2_c3684	tail tip morphogenesis	other biological processes	P	Integrin alpha ina-1
ruditapes2_c3684	organ morphogenesis	developmental processes	P	Integrin alpha ina-1
ruditapes2_c3684	reproduction	other biological processes	P	Integrin alpha ina-1
ruditapes2_c3684	cell-cell adhesion mediated by integrin	cell adhesion	P	Integrin alpha ina-1
ruditapes_c19017	apoptosis	death	P	RING finger protein nhl-1
ruditapes_c7738	apoptosis	death	P	RING finger protein nhl-1
ruditapes_c11700	apoptosis	death	P	RING finger protein nhl-1
ruditapes_c20855	apoptosis	death	P	RING finger protein nhl-1
ruditapes_c31446	regulation of long-term neuronal synaptic plasticity	cell-cell signaling	P	Probable diacylglycerol kinase 3 (DAG kinase 3) (EC 2.7.1.107) (Diglyceride kinase 3) (DGK-3)
ruditapes_c31446	thermotaxis	other biological processes	P	Probable diacylglycerol kinase 3 (DAG kinase 3) (EC 2.7.1.107) (Diglyceride kinase 3) (DGK-3)
ruditapes_c31446	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable diacylglycerol kinase 3 (DAG kinase 3) (EC 2.7.1.107) (Diglyceride kinase 3) (DGK-3)
ruditapes_c31446	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Probable diacylglycerol kinase 3 (DAG kinase 3) (EC 2.7.1.107) (Diglyceride kinase 3) (DGK-3)
ruditapes_c31446	phosphorylation	other metabolic processes	P	Probable diacylglycerol kinase 3 (DAG kinase 3) (EC 2.7.1.107) (Diglyceride kinase 3) (DGK-3)
ruditapes2_c1342	endocytosis	transport	P	"Cysteine-rich, acidic integral membrane protein"
ruditapes2_c1342	endocytosis	cell organization and biogenesis	P	"Cysteine-rich, acidic integral membrane protein"
ruditapes2_c323	skeletal system development	developmental processes	P	Collagen alpha-1(X) chain
ruditapes_c2279	mitotic sister chromatid segregation	cell cycle and proliferation	P	Inner nuclear membrane protein SRC1 (Helix-extension-helix domain-containing protein 1)
ruditapes_c2279	mitotic sister chromatid segregation	cell organization and biogenesis	P	Inner nuclear membrane protein SRC1 (Helix-extension-helix domain-containing protein 1)
ruditapes_c2279	maintenance of rDNA	DNA metabolism	P	Inner nuclear membrane protein SRC1 (Helix-extension-helix domain-containing protein 1)
ruditapes_c2279	maintenance of rDNA	cell organization and biogenesis	P	Inner nuclear membrane protein SRC1 (Helix-extension-helix domain-containing protein 1)
ruditapes_c12457	innate immune response	stress response	P	Complement factor B (EC 3.4.21.47) (C3/C5 convertase) (Properdin factor B) (Fragment)
ruditapes_c12457	proteolysis	protein metabolism	P	Complement factor B (EC 3.4.21.47) (C3/C5 convertase) (Properdin factor B) (Fragment)
ruditapes_c12457	"complement activation, alternative pathway"	stress response	P	Complement factor B (EC 3.4.21.47) (C3/C5 convertase) (Properdin factor B) (Fragment)
ruditapes_c12457	"complement activation, alternative pathway"	protein metabolism	P	Complement factor B (EC 3.4.21.47) (C3/C5 convertase) (Properdin factor B) (Fragment)
ruditapes2_c3008	transport	transport	P	Calcium-activated potassium channel slowpoke (dSlo) (BK channel) (Maxi K channel) (MaxiK)
ruditapes2_c3008	"male courtship behavior, veined wing generated song production"	other biological processes	P	Calcium-activated potassium channel slowpoke (dSlo) (BK channel) (Maxi K channel) (MaxiK)
ruditapes2_c3008	circadian behavior	other biological processes	P	Calcium-activated potassium channel slowpoke (dSlo) (BK channel) (Maxi K channel) (MaxiK)
ruditapes2_c3008	potassium ion transport	transport	P	Calcium-activated potassium channel slowpoke (dSlo) (BK channel) (Maxi K channel) (MaxiK)
ruditapes2_c3008	circadian rhythm	other biological processes	P	Calcium-activated potassium channel slowpoke (dSlo) (BK channel) (Maxi K channel) (MaxiK)
ruditapes2_c3008	transmembrane transport	transport	P	Calcium-activated potassium channel slowpoke (dSlo) (BK channel) (Maxi K channel) (MaxiK)
ruditapes2_c3008	response to drug	other biological processes	P	Calcium-activated potassium channel slowpoke (dSlo) (BK channel) (Maxi K channel) (MaxiK)
ruditapes2_c3008	regulation of transmembrane ion transport	transport	P	Calcium-activated potassium channel slowpoke (dSlo) (BK channel) (Maxi K channel) (MaxiK)
ruditapes2_c3008	ion transport	transport	P	Calcium-activated potassium channel slowpoke (dSlo) (BK channel) (Maxi K channel) (MaxiK)
ruditapes2_c133	protein folding	protein metabolism	P	Prefoldin subunit 6 (Protein Ke2)
ruditapes2_c133	chaperone-mediated protein complex assembly	cell organization and biogenesis	P	Prefoldin subunit 6 (Protein Ke2)
ruditapes_c3898	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c3898	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c3898	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c3898	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c3898	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_lrc10473	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase)
ruditapes_c17712	translation	protein metabolism	P	50S ribosomal protein L15
ruditapes_c25128	tRNA processing	RNA metabolism	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_c25128	methylation	other metabolic processes	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes2_c466	gluconeogenesis	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes2_c466	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes_c21082	SOS response	stress response	P	DNA replication and repair protein RecF
ruditapes_c21082	DNA repair	stress response	P	DNA replication and repair protein RecF
ruditapes_c21082	DNA repair	DNA metabolism	P	DNA replication and repair protein RecF
ruditapes_c21082	response to DNA damage stimulus	stress response	P	DNA replication and repair protein RecF
ruditapes_c21082	DNA replication	DNA metabolism	P	DNA replication and repair protein RecF
ruditapes_c5488	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c5488	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c5488	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c5488	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_s37474	carbohydrate phosphorylation	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_s37474	carbohydrate metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_s37474	galactose metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_s37474	phosphorylation	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_s37474	metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c22444	aromatic amino acid family biosynthetic process	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c22444	cellular amino acid biosynthetic process	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c22444	phosphorylation	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c11348	peptidoglycan biosynthetic process	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c11348	dephosphorylation	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c11348	regulation of cell shape	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c11348	cell wall organization	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c11348	response to antibiotic	other biological processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c18823	monosaccharide metabolic process	other metabolic processes	P	L-arabinose isomerase (EC 5.3.1.4)
ruditapes_c18823	carbohydrate metabolic process	other metabolic processes	P	L-arabinose isomerase (EC 5.3.1.4)
ruditapes_c18823	arabinose catabolic process	other metabolic processes	P	L-arabinose isomerase (EC 5.3.1.4)
ruditapes_c18823	metabolic process	other metabolic processes	P	L-arabinose isomerase (EC 5.3.1.4)
ruditapes_c18823	fucose metabolic process	other metabolic processes	P	L-arabinose isomerase (EC 5.3.1.4)
ruditapes_c5840	cell division	other biological processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c5840	lipid glycosylation	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c5840	carbohydrate metabolic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c5840	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c5840	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c5840	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c5840	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c5840	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c8856	ion transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c8856	transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c8856	proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c8856	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c8856	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c8856	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c29671	fatty acid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_c29671	phospholipid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_c14298	response to DNA damage stimulus	stress response	P	Holliday junction resolvase RecU (EC 3.1.22.-) (Recombination protein U homolog)
ruditapes_c14298	DNA repair	stress response	P	Holliday junction resolvase RecU (EC 3.1.22.-) (Recombination protein U homolog)
ruditapes_c14298	DNA repair	DNA metabolism	P	Holliday junction resolvase RecU (EC 3.1.22.-) (Recombination protein U homolog)
ruditapes_c14298	DNA recombination	DNA metabolism	P	Holliday junction resolvase RecU (EC 3.1.22.-) (Recombination protein U homolog)
ruditapes_c8081	transport	transport	P	Large-conductance mechanosensitive channel
ruditapes_c8081	ion transport	transport	P	Large-conductance mechanosensitive channel
ruditapes_c19303	glucuronate catabolic process	other metabolic processes	P	Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydro-lyase)
ruditapes_c29293	translation	protein metabolism	P	50S ribosomal protein L18
ruditapes_c6348	rDNA condensation	cell cycle and proliferation	P	Sister chromatid cohesion protein 2
ruditapes_c6348	rDNA condensation	cell organization and biogenesis	P	Sister chromatid cohesion protein 2
ruditapes_c6348	cell cycle	cell cycle and proliferation	P	Sister chromatid cohesion protein 2
ruditapes_c6348	tRNA gene clustering	cell organization and biogenesis	P	Sister chromatid cohesion protein 2
ruditapes_c6348	2-micrometer plasmid partitioning	other biological processes	P	Sister chromatid cohesion protein 2
ruditapes_c6348	DNA repair	stress response	P	Sister chromatid cohesion protein 2
ruditapes_c6348	establishment of mitotic sister chromatid cohesion	cell organization and biogenesis	P	Sister chromatid cohesion protein 2
ruditapes_c6348	response to DNA damage stimulus	stress response	P	Sister chromatid cohesion protein 2
ruditapes_c6348	DNA repair	DNA metabolism	P	Sister chromatid cohesion protein 2
ruditapes_c6348	double-strand break repair	stress response	P	Sister chromatid cohesion protein 2
ruditapes_c6348	double-strand break repair	DNA metabolism	P	Sister chromatid cohesion protein 2
ruditapes_c6348	mitotic chromosome condensation	cell cycle and proliferation	P	Sister chromatid cohesion protein 2
ruditapes_c6348	mitotic chromosome condensation	cell organization and biogenesis	P	Sister chromatid cohesion protein 2
ruditapes_c6348	establishment of mitotic sister chromatid cohesion	cell cycle and proliferation	P	Sister chromatid cohesion protein 2
ruditapes_c22580	mitochondrion morphogenesis	cell organization and biogenesis	P	"Protein UPS3, mitochondrial (Genetic interactor of prohibitins protein 2) (Unprocessed MGM1 protein 3)"
ruditapes_c10655	DNA damage checkpoint	cell cycle and proliferation	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	DNA damage checkpoint	signal transduction	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	DNA damage checkpoint	stress response	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	"transcription, DNA-dependent"	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	nucleotide-excision repair	stress response	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	nucleotide-excision repair	DNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	histone lysine methylation	protein metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	histone lysine methylation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	chromatin silencing at telomere	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	recombinational repair	stress response	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	recombinational repair	DNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	histone H3-K79 methylation	protein metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	histone H3-K79 methylation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	histone H3-K79 methylation	protein metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	histone H3-K79 methylation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	methylation	other metabolic processes	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	nucleotide-excision repair	stress response	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	nucleotide-excision repair	DNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	methylation	other metabolic processes	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	"transcription, DNA-dependent"	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	chromatin modification	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	histone lysine methylation	protein metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	histone lysine methylation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	DNA damage checkpoint	cell cycle and proliferation	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	DNA damage checkpoint	signal transduction	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	DNA damage checkpoint	stress response	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	chromatin silencing at telomere	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	recombinational repair	stress response	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	recombinational repair	DNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c7929	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c10655	chromatin modification	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Disrupter of telomere silencing protein 1) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)"
ruditapes_c16063	multicellular organismal development	developmental processes	P	Putative epidermal cell surface receptor (Stranded at second protein)
ruditapes_c16063	instar larval development	developmental processes	P	Putative epidermal cell surface receptor (Stranded at second protein)
ruditapes_c3173	instar larval development	developmental processes	P	Putative epidermal cell surface receptor (Stranded at second protein)
ruditapes_c3173	multicellular organismal development	developmental processes	P	Putative epidermal cell surface receptor (Stranded at second protein)
ruditapes_s36715	protein sumoylation	protein metabolism	P	E3 SUMO-protein ligase SIZ1 (EC 6.3.2.-) (SAP and Miz-finger domain-containing protein 1) (Ubiquitin-like protein ligase 1)
ruditapes_s36715	chromosome segregation	other biological processes	P	E3 SUMO-protein ligase SIZ1 (EC 6.3.2.-) (SAP and Miz-finger domain-containing protein 1) (Ubiquitin-like protein ligase 1)
ruditapes_c15134	cell cycle	cell cycle and proliferation	P	Ftsk domain-containing protein CA
ruditapes_c15134	cell division	other biological processes	P	Ftsk domain-containing protein CA
ruditapes_c15134	chromosome segregation	other biological processes	P	Ftsk domain-containing protein CA
ruditapes_c10928	telomere maintenance via telomerase	DNA metabolism	P	"DNA damage checkpoint protein LCD1 (DNA damage checkpoint protein 2) (Lethal, checkpoint-defective, DNA damage-sensitive protein 1)"
ruditapes_c10928	telomere maintenance via telomerase	cell organization and biogenesis	P	"DNA damage checkpoint protein LCD1 (DNA damage checkpoint protein 2) (Lethal, checkpoint-defective, DNA damage-sensitive protein 1)"
ruditapes_c10928	DNA damage checkpoint	cell cycle and proliferation	P	"DNA damage checkpoint protein LCD1 (DNA damage checkpoint protein 2) (Lethal, checkpoint-defective, DNA damage-sensitive protein 1)"
ruditapes_c10928	response to DNA damage stimulus	stress response	P	"DNA damage checkpoint protein LCD1 (DNA damage checkpoint protein 2) (Lethal, checkpoint-defective, DNA damage-sensitive protein 1)"
ruditapes_c10928	DNA repair	stress response	P	"DNA damage checkpoint protein LCD1 (DNA damage checkpoint protein 2) (Lethal, checkpoint-defective, DNA damage-sensitive protein 1)"
ruditapes_c10928	DNA repair	DNA metabolism	P	"DNA damage checkpoint protein LCD1 (DNA damage checkpoint protein 2) (Lethal, checkpoint-defective, DNA damage-sensitive protein 1)"
ruditapes_c10928	chromatin modification	cell organization and biogenesis	P	"DNA damage checkpoint protein LCD1 (DNA damage checkpoint protein 2) (Lethal, checkpoint-defective, DNA damage-sensitive protein 1)"
ruditapes_c10928	DNA damage checkpoint	signal transduction	P	"DNA damage checkpoint protein LCD1 (DNA damage checkpoint protein 2) (Lethal, checkpoint-defective, DNA damage-sensitive protein 1)"
ruditapes_c10928	DNA damage checkpoint	stress response	P	"DNA damage checkpoint protein LCD1 (DNA damage checkpoint protein 2) (Lethal, checkpoint-defective, DNA damage-sensitive protein 1)"
ruditapes_c10928	establishment of protein localization	other biological processes	P	"DNA damage checkpoint protein LCD1 (DNA damage checkpoint protein 2) (Lethal, checkpoint-defective, DNA damage-sensitive protein 1)"
ruditapes_c23261	"transcription, DNA-dependent"	RNA metabolism	P	Uracil catabolism protein 2
ruditapes_c23261	nucleotide metabolic process	other metabolic processes	P	Uracil catabolism protein 2
ruditapes_c23261	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uracil catabolism protein 2
ruditapes_c23261	cytosine metabolic process	other metabolic processes	P	Uracil catabolism protein 2
ruditapes_c11149	positive regulation of GTPase activity	other biological processes	P	ADP-ribosylation factor GTPase-activating protein effector protein 1 (ARF GAP effector protein 1) (Suppressor of ARF1 thermosensitive mutant protein 1)
ruditapes_c11149	regulation of ARF GTPase activity	signal transduction	P	ADP-ribosylation factor GTPase-activating protein effector protein 1 (ARF GAP effector protein 1) (Suppressor of ARF1 thermosensitive mutant protein 1)
ruditapes_c11149	intra-Golgi vesicle-mediated transport	transport	P	ADP-ribosylation factor GTPase-activating protein effector protein 1 (ARF GAP effector protein 1) (Suppressor of ARF1 thermosensitive mutant protein 1)
ruditapes_c11149	ER to Golgi vesicle-mediated transport	transport	P	ADP-ribosylation factor GTPase-activating protein effector protein 1 (ARF GAP effector protein 1) (Suppressor of ARF1 thermosensitive mutant protein 1)
ruditapes_c11149	protein transport	transport	P	ADP-ribosylation factor GTPase-activating protein effector protein 1 (ARF GAP effector protein 1) (Suppressor of ARF1 thermosensitive mutant protein 1)
ruditapes_c11149	transport	transport	P	ADP-ribosylation factor GTPase-activating protein effector protein 1 (ARF GAP effector protein 1) (Suppressor of ARF1 thermosensitive mutant protein 1)
ruditapes_c28870	fungal-type cell wall organization	cell organization and biogenesis	P	Protein HLR1 (LRE1 homolog)
ruditapes_c28870	cell wall organization	cell organization and biogenesis	P	Protein HLR1 (LRE1 homolog)
ruditapes_c28975	sporulation resulting in formation of a cellular spore	other biological processes	P	Prespore protein Dp87
ruditapes_c23476	cellular amino acid biosynthetic process	other metabolic processes	P	Putative cystathionine gamma-synthase YML082W (EC 2.5.1.48) (O-succinylhomoserine (thiol)-lyase)
ruditapes_c23476	cellular amino acid metabolic process	other metabolic processes	P	Putative cystathionine gamma-synthase YML082W (EC 2.5.1.48) (O-succinylhomoserine (thiol)-lyase)
ruditapes_c23476	methionine biosynthetic process	other metabolic processes	P	Putative cystathionine gamma-synthase YML082W (EC 2.5.1.48) (O-succinylhomoserine (thiol)-lyase)
ruditapes_s39836	auxin biosynthetic process	other metabolic processes	P	Indoleacetamide hydrolase (IAH) (EC 3.5.1.-) (Indole-3-acetamide hydrolase)
ruditapes_c24346	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c24346	metabolic process	other metabolic processes	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c24346	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c24346	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c24346	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c24346	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c24346	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c24346	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c24346	viral reproduction	other biological processes	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c24418	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c24418	viral genome replication	other biological processes	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c24418	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c24418	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c24418	proteolysis	protein metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c15297	interspecies interaction between organisms	other biological processes	P	Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block 1 protein) (TGBp1)
ruditapes_c15297	"spread of virus within host, cell to cell"	other biological processes	P	Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block 1 protein) (TGBp1)
ruditapes_c15297	transport	transport	P	Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block 1 protein) (TGBp1)
ruditapes2_c1605	middle ear morphogenesis	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	angiogenesis	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	positive regulation of neuron projection development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	positive regulation of neuron projection development	cell organization and biogenesis	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	regulation of lateral mesodermal cell fate specification	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	positive regulation of cell proliferation	cell cycle and proliferation	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	fibroblast growth factor receptor signaling pathway	signal transduction	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	orbitofrontal cortex development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	embryonic limb morphogenesis	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	outer ear morphogenesis	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	cell maturation	other biological processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	branching involved in salivary gland morphogenesis	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	induction of an organ	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	induction of an organ	cell-cell signaling	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	regulation of gene expression	other metabolic processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	central nervous system neuron development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	lung development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	negative regulation of osteoblast differentiation	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	mesenchymal cell differentiation	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling	cell-cell signaling	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	sensory perception of sound	other biological processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	neuron projection development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	neuron projection development	cell organization and biogenesis	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	salivary gland morphogenesis	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	protein amino acid phosphorylation	protein metabolism	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	peptidyl-tyrosine phosphorylation	protein metabolism	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	midbrain development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	regulation of cell proliferation	cell cycle and proliferation	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	lung-associated mesenchyme development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	positive regulation of MAP kinase activity	other metabolic processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	positive regulation of cardiac muscle cell proliferation	cell cycle and proliferation	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	positive regulation of cardiac muscle cell proliferation	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	in utero embryonic development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	negative regulation of apoptosis	death	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	positive regulation of neuron differentiation	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	positive regulation of phospholipase C activity	other biological processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	stem cell maintenance	other biological processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	regulation of sensory perception of pain	other biological processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	phosphorylation	other metabolic processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	neuroblast division in the ventricular zone	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	ureteric bud development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	blood vessel morphogenesis	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	brain development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	generation of neurons	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	paraxial mesoderm development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	auditory receptor cell development	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	motogenic signaling involved in postnatal olfactory bulb interneuron migration	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	positive regulation of cell cycle	cell cycle and proliferation	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	neuroblast division in the ventricular zone	cell cycle and proliferation	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	protein amino acid autophosphorylation	protein metabolism	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	positive regulation of mesenchymal cell proliferation	cell cycle and proliferation	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	chondrocyte differentiation	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	inner ear morphogenesis	developmental processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	negative regulation of gene expression	other metabolic processes	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes2_c1605	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
ruditapes_c19046	protein processing	protein metabolism	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	embryonic skeletal system development	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	heart development	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	embryo implantation	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	proteolysis	protein metabolism	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	cytokine biosynthetic process	other metabolic processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	kidney development	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	peptide biosynthetic process	other metabolic processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	peptide hormone processing	protein metabolism	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	embryonic gut development	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	respiratory tube development	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	"viral assembly, maturation, egress, and release"	other biological processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	anterior/posterior pattern formation	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	limb morphogenesis	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c19046	female pregnancy	other biological processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c8469	melanin biosynthetic process	other metabolic processes	P	Tyrosinase (EC 1.14.18.1) (Monophenol monooxygenase)
ruditapes_c8469	metabolic process	other metabolic processes	P	Tyrosinase (EC 1.14.18.1) (Monophenol monooxygenase)
ruditapes_c8469	oxidation reduction	other metabolic processes	P	Tyrosinase (EC 1.14.18.1) (Monophenol monooxygenase)
ruditapes2_c2914	proteolysis	protein metabolism	P	Glutamate carboxypeptidase 2 (EC 3.4.17.21) (Cell growth-inhibiting gene 27 protein) (Folate hydrolase 1) (Folylpoly-gamma-glutamate carboxypeptidase) (FGCP) (Glutamate carboxypeptidase II) (GCPII) (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Prostate-specific membrane antigen) (PSM) (PSMA) (Pteroylpoly-gamma-glutamate carboxypeptidase)
ruditapes2_c2914	folic acid and derivative metabolic process	other metabolic processes	P	Glutamate carboxypeptidase 2 (EC 3.4.17.21) (Cell growth-inhibiting gene 27 protein) (Folate hydrolase 1) (Folylpoly-gamma-glutamate carboxypeptidase) (FGCP) (Glutamate carboxypeptidase II) (GCPII) (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Prostate-specific membrane antigen) (PSM) (PSMA) (Pteroylpoly-gamma-glutamate carboxypeptidase)
ruditapes2_c2914	metabolic process	other metabolic processes	P	Glutamate carboxypeptidase 2 (EC 3.4.17.21) (Cell growth-inhibiting gene 27 protein) (Folate hydrolase 1) (Folylpoly-gamma-glutamate carboxypeptidase) (FGCP) (Glutamate carboxypeptidase II) (GCPII) (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Prostate-specific membrane antigen) (PSM) (PSMA) (Pteroylpoly-gamma-glutamate carboxypeptidase)
ruditapes_c26731	intra-Golgi vesicle-mediated transport	transport	P	Conserved oligomeric Golgi complex subunit 8 (COG complex subunit 8) (Component of oligomeric Golgi complex 8)
ruditapes_c26731	CVT pathway	transport	P	Conserved oligomeric Golgi complex subunit 8 (COG complex subunit 8) (Component of oligomeric Golgi complex 8)
ruditapes_c26731	CVT pathway	other metabolic processes	P	Conserved oligomeric Golgi complex subunit 8 (COG complex subunit 8) (Component of oligomeric Golgi complex 8)
ruditapes_c26731	protein transport	transport	P	Conserved oligomeric Golgi complex subunit 8 (COG complex subunit 8) (Component of oligomeric Golgi complex 8)
ruditapes_c26731	transport	transport	P	Conserved oligomeric Golgi complex subunit 8 (COG complex subunit 8) (Component of oligomeric Golgi complex 8)
ruditapes_lrc15881	respiratory chain complex IV assembly	cell organization and biogenesis	P	Probable cytochrome c biosynthesis protein
ruditapes_lrc15881	protein complex assembly	cell organization and biogenesis	P	Probable cytochrome c biosynthesis protein
ruditapes_lrc15881	cytochrome complex assembly	cell organization and biogenesis	P	Probable cytochrome c biosynthesis protein
ruditapes_lrc15881	heme transport	transport	P	Probable cytochrome c biosynthesis protein
ruditapes_c22661	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Suppressor of stem-loop protein 1 (General transcription and DNA repair factor IIH subunit SSL1) (TFIIH subunit SSL1)
ruditapes_c22661	"transcription, DNA-dependent"	RNA metabolism	P	Suppressor of stem-loop protein 1 (General transcription and DNA repair factor IIH subunit SSL1) (TFIIH subunit SSL1)
ruditapes_c22661	transcription from RNA polymerase II promoter	RNA metabolism	P	Suppressor of stem-loop protein 1 (General transcription and DNA repair factor IIH subunit SSL1) (TFIIH subunit SSL1)
ruditapes_c22661	nucleotide-excision repair	stress response	P	Suppressor of stem-loop protein 1 (General transcription and DNA repair factor IIH subunit SSL1) (TFIIH subunit SSL1)
ruditapes_c22661	nucleotide-excision repair	DNA metabolism	P	Suppressor of stem-loop protein 1 (General transcription and DNA repair factor IIH subunit SSL1) (TFIIH subunit SSL1)
ruditapes_c22661	translational initiation	protein metabolism	P	Suppressor of stem-loop protein 1 (General transcription and DNA repair factor IIH subunit SSL1) (TFIIH subunit SSL1)
ruditapes_c22661	DNA repair	stress response	P	Suppressor of stem-loop protein 1 (General transcription and DNA repair factor IIH subunit SSL1) (TFIIH subunit SSL1)
ruditapes_c22661	DNA repair	DNA metabolism	P	Suppressor of stem-loop protein 1 (General transcription and DNA repair factor IIH subunit SSL1) (TFIIH subunit SSL1)
ruditapes_c22661	response to DNA damage stimulus	stress response	P	Suppressor of stem-loop protein 1 (General transcription and DNA repair factor IIH subunit SSL1) (TFIIH subunit SSL1)
ruditapes_c25586	positive regulation of isotype switching to IgG isotypes	developmental processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of isotype switching to IgG isotypes	DNA metabolism	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of activated T cell proliferation	cell cycle and proliferation	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	negative regulation of apoptosis	death	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	negative regulation of T cell activation	other biological processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of MHC class II biosynthetic process	other metabolic processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of transcription factor activity	RNA metabolism	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	negative regulation of osteoclast differentiation	developmental processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of tyrosine phosphorylation of Stat5 protein	signal transduction	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of tyrosine phosphorylation of Stat5 protein	protein metabolism	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of B cell activation	other biological processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of interleukin-13 production	other biological processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	B cell activation	other biological processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of T cell differentiation	developmental processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	immune response	other biological processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of B cell proliferation	cell cycle and proliferation	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	cholesterol metabolic process	other metabolic processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	regulation of phosphorylation	other metabolic processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of chemokine biosynthetic process	other metabolic processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	innate immune response in mucosa	stress response	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	regulation of immune response	other biological processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of T cell proliferation	cell cycle and proliferation	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of isotype switching to IgE isotypes	developmental processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c25586	positive regulation of isotype switching to IgE isotypes	DNA metabolism	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c22858	polysaccharide catabolic process	other metabolic processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (Chitobiase) (N-acetyl-beta-glucosaminidase)
ruditapes_c22858	metabolic process	other metabolic processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (Chitobiase) (N-acetyl-beta-glucosaminidase)
ruditapes_c22858	chitin catabolic process	other metabolic processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (Chitobiase) (N-acetyl-beta-glucosaminidase)
ruditapes_c22858	carbohydrate metabolic process	other metabolic processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (Chitobiase) (N-acetyl-beta-glucosaminidase)
ruditapes_c19947	carboxylic acid metabolic process	other metabolic processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c19947	glutamate metabolic process	other metabolic processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c19947	cellular response to oxidative stress	stress response	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c19947	glutamate catabolic process	other metabolic processes	P	Glutamate decarboxylase (GAD) (EC 4.1.1.15)
ruditapes_c29368	positive regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	positive regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	regulation of neuron differentiation	developmental processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	positive regulation of protein amino acid phosphorylation	protein metabolism	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	response to testosterone stimulus	other biological processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	ovarian follicle development	developmental processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	cell cycle	cell cycle and proliferation	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	positive regulation of epithelial cell proliferation	cell cycle and proliferation	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	response to organic cyclic substance	other biological processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	liver development	developmental processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	spermatogenesis	other biological processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	response to estradiol stimulus	other biological processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	response to ethanol	other biological processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	response to peptide hormone stimulus	other biological processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	positive regulation of cell proliferation	cell cycle and proliferation	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	response to cAMP	other biological processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	cellular response to insulin stimulus	other biological processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	regulation of cell cycle	cell cycle and proliferation	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c29368	cell division	other biological processes	P	G1/S-specific cyclin-D2 (Vin-1 proto-oncogene)
ruditapes_c28496	signal transduction	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	activation of NF-kappaB-inducing kinase activity	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	signal transduction	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor 4 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor 4 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor 4 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor 3 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor 3 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	MyD88-dependent toll-like receptor signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	activation of innate immune response	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	signal transduction	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor 4 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor 2 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor 2 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	activation of NF-kappaB-inducing kinase activity	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor 7 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor 7 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor 2 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor 2 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor 7 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor 7 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor 3 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor 3 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	MyD88-dependent toll-like receptor signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor 4 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor 5 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor 5 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor 2 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor 7 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor 7 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	MyD88-dependent toll-like receptor signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor 4 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor 5 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor 5 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor 5 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c7250	toll-like receptor 2 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor 3 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	toll-like receptor 3 signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor signaling pathway	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	toll-like receptor 5 signaling pathway	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	activation of innate immune response	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	activation of NF-kappaB-inducing kinase activity	signal transduction	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28496	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c29477	activation of innate immune response	stress response	P	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]
ruditapes_c28194	positive regulation of cell proliferation	cell cycle and proliferation	P	Macrophage-stimulating protein receptor (MSP receptor) (EC 2.7.10.1) (CDw136) (Protein-tyrosine kinase 8) (p185-Ron) (CD antigen CD136) [Cleaved into: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]
ruditapes_c28194	protein amino acid phosphorylation	protein metabolism	P	Macrophage-stimulating protein receptor (MSP receptor) (EC 2.7.10.1) (CDw136) (Protein-tyrosine kinase 8) (p185-Ron) (CD antigen CD136) [Cleaved into: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]
ruditapes_c28194	innate immune response	stress response	P	Macrophage-stimulating protein receptor (MSP receptor) (EC 2.7.10.1) (CDw136) (Protein-tyrosine kinase 8) (p185-Ron) (CD antigen CD136) [Cleaved into: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]
ruditapes_c28194	cell motion	other biological processes	P	Macrophage-stimulating protein receptor (MSP receptor) (EC 2.7.10.1) (CDw136) (Protein-tyrosine kinase 8) (p185-Ron) (CD antigen CD136) [Cleaved into: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]
ruditapes_c28194	defense response	stress response	P	Macrophage-stimulating protein receptor (MSP receptor) (EC 2.7.10.1) (CDw136) (Protein-tyrosine kinase 8) (p185-Ron) (CD antigen CD136) [Cleaved into: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]
ruditapes_c28194	response to virus	other biological processes	P	Macrophage-stimulating protein receptor (MSP receptor) (EC 2.7.10.1) (CDw136) (Protein-tyrosine kinase 8) (p185-Ron) (CD antigen CD136) [Cleaved into: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]
ruditapes_c28194	signal transduction	signal transduction	P	Macrophage-stimulating protein receptor (MSP receptor) (EC 2.7.10.1) (CDw136) (Protein-tyrosine kinase 8) (p185-Ron) (CD antigen CD136) [Cleaved into: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]
ruditapes_c28194	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Macrophage-stimulating protein receptor (MSP receptor) (EC 2.7.10.1) (CDw136) (Protein-tyrosine kinase 8) (p185-Ron) (CD antigen CD136) [Cleaved into: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]
ruditapes_c28194	phosphorylation	other metabolic processes	P	Macrophage-stimulating protein receptor (MSP receptor) (EC 2.7.10.1) (CDw136) (Protein-tyrosine kinase 8) (p185-Ron) (CD antigen CD136) [Cleaved into: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]
ruditapes_c28194	multicellular organismal development	developmental processes	P	Macrophage-stimulating protein receptor (MSP receptor) (EC 2.7.10.1) (CDw136) (Protein-tyrosine kinase 8) (p185-Ron) (CD antigen CD136) [Cleaved into: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]
ruditapes_c28194	single fertilization	other biological processes	P	Macrophage-stimulating protein receptor (MSP receptor) (EC 2.7.10.1) (CDw136) (Protein-tyrosine kinase 8) (p185-Ron) (CD antigen CD136) [Cleaved into: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating protein receptor beta chain]
ruditapes_c26663	biological_process	other biological processes	P	SVF1-like protein YDR222W
ruditapes_c26663	response to oxidative stress	stress response	P	SVF1-like protein YDR222W
ruditapes_c14182	"transcription, DNA-dependent"	RNA metabolism	P	Sucrose operon repressor (Scr operon regulatory protein)
ruditapes_c14182	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Sucrose operon repressor (Scr operon regulatory protein)
ruditapes_c31580	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c18676	tRNA processing	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes_c18676	tRNA 3'-trailer cleavage	RNA metabolism	P	Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)
ruditapes_c17794	peptidoglycan biosynthetic process	other metabolic processes	P	Lysine racemase (EC 5.1.1.5)
ruditapes_c17794	alanine metabolic process	other metabolic processes	P	Lysine racemase (EC 5.1.1.5)
ruditapes_c17794	cell wall organization	cell organization and biogenesis	P	Lysine racemase (EC 5.1.1.5)
ruditapes_c17794	regulation of cell shape	cell organization and biogenesis	P	Lysine racemase (EC 5.1.1.5)
ruditapes_c23132	translation	protein metabolism	P	50S ribosomal protein L15
ruditapes_c15927	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c15927	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c15927	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c15927	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c17911	cell cycle	cell cycle and proliferation	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c17911	peptidoglycan biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c17911	regulation of cell shape	cell organization and biogenesis	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c17911	cell division	other biological processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c17911	cell wall organization	cell organization and biogenesis	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c17911	biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c17911	peptidoglycan-based cell wall biogenesis	other biological processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c27949	carbohydrate transport	transport	P	Capsule polysaccharide modification protein LipA
ruditapes_c27949	polysaccharide biosynthetic process	other metabolic processes	P	Capsule polysaccharide modification protein LipA
ruditapes_c27949	transport	transport	P	Capsule polysaccharide modification protein LipA
ruditapes_c27949	polysaccharide transport	transport	P	Capsule polysaccharide modification protein LipA
ruditapes_c14271	lipid catabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (Phospholipase AdRab-B) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes_c14271	lipid metabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (Phospholipase AdRab-B) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes_c4721	lipid catabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (Phospholipase AdRab-B) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes_c4721	lipid metabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (Phospholipase AdRab-B) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes_c19746	ion transport	transport	P	Potassium voltage-gated channel subfamily A member 4 (BAK4) (Voltage-gated potassium channel subunit Kv1.4)
ruditapes_c19746	regulation of transmembrane ion transport	transport	P	Potassium voltage-gated channel subfamily A member 4 (BAK4) (Voltage-gated potassium channel subunit Kv1.4)
ruditapes_c19746	transport	transport	P	Potassium voltage-gated channel subfamily A member 4 (BAK4) (Voltage-gated potassium channel subunit Kv1.4)
ruditapes_c19746	potassium ion transport	transport	P	Potassium voltage-gated channel subfamily A member 4 (BAK4) (Voltage-gated potassium channel subunit Kv1.4)
ruditapes_c19746	transmembrane transport	transport	P	Potassium voltage-gated channel subfamily A member 4 (BAK4) (Voltage-gated potassium channel subunit Kv1.4)
ruditapes_c11345	protein arginylation	protein metabolism	P	Putative arginyl-tRNA--protein transferase (Arginyltransferase) (R-transferase) (EC 2.3.2.8)
ruditapes_c28025	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Retrovirus-related Pol polyprotein from type I retrotransposable element R2) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease] (Fragment)
ruditapes_c29245	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Late expression factor 11
ruditapes_c29245	"transcription, DNA-dependent"	RNA metabolism	P	Late expression factor 11
ruditapes_c29245	viral infectious cycle	other biological processes	P	Late expression factor 11
ruditapes_c8629	interspecies interaction between organisms	other biological processes	P	Major capsid protein L1
ruditapes_c31085	translational initiation	protein metabolism	P	Polyadenylate-binding protein 5 (PABP-5) (Poly(A)-binding protein 5)
ruditapes_c31085	nuclear-transcribed mRNA poly(A) tail shortening	RNA metabolism	P	Polyadenylate-binding protein 5 (PABP-5) (Poly(A)-binding protein 5)
ruditapes_c19597	muscle organ development	developmental processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	embryonic development	developmental processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	neurotransmitter receptor metabolic process	other metabolic processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	neurotransmitter receptor metabolic process	cell-cell signaling	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	nervous system development	developmental processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	heart development	developmental processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	cell morphogenesis	cell organization and biogenesis	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	MAPKKK cascade	signal transduction	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	cell migration	other biological processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	locomotory behavior	other biological processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	synaptogenesis	developmental processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	synaptogenesis	cell organization and biogenesis	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	positive regulation of striated muscle cell differentiation	developmental processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	Notch signaling pathway	signal transduction	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	neuron fate commitment	developmental processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	peripheral nervous system development	developmental processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	cardiac muscle cell differentiation	developmental processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	regulation of cell differentiation	other biological processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	positive regulation of Ras protein signal transduction	signal transduction	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	positive regulation of protein kinase activity	other metabolic processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c19597	glial cell differentiation	developmental processes	P	"Pro-neuregulin-1, membrane-bound isoform (Pro-NRG1) [Cleaved into: Neuregulin-1 (Acetylcholine receptor-inducing activity) (ARIA)]"
ruditapes_c15238	oxidation reduction	other metabolic processes	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c15238	queuosine biosynthetic process	RNA metabolism	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes2_lrc5718	cytoskeleton organization	cell organization and biogenesis	P	Serine proteinase stubble (EC 3.4.21.-) (Protein stubble-stubbloid) [Cleaved into: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain]
ruditapes2_lrc5718	actin filament bundle formation	cell organization and biogenesis	P	Serine proteinase stubble (EC 3.4.21.-) (Protein stubble-stubbloid) [Cleaved into: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain]
ruditapes2_lrc5718	proteolysis	protein metabolism	P	Serine proteinase stubble (EC 3.4.21.-) (Protein stubble-stubbloid) [Cleaved into: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain]
ruditapes_lrc20716	transport	transport	P	Putative O-antigen export protein
ruditapes_lrc20716	lipopolysaccharide biosynthetic process	other metabolic processes	P	Putative O-antigen export protein
ruditapes_lrc20716	polysaccharide biosynthetic process	other metabolic processes	P	Putative O-antigen export protein
ruditapes_lrc34938	RNA processing	RNA metabolism	P	Mini-ribonuclease 3 (Mini-3) (Mini-RNase 3) (EC 3.1.26.-) (Mini-RNase III) (Mini-III) (URF4)
ruditapes_c11097	cellular amino acid biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c11097	proline biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c11097	metabolic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c11097	oxidation reduction	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c22314	receptor-mediated endocytosis	transport	P	Macrophage scavenger receptor types I and II (Macrophage acetylated LDL receptor I and II) (CD antigen CD204)
ruditapes_c22314	receptor-mediated endocytosis	cell organization and biogenesis	P	Macrophage scavenger receptor types I and II (Macrophage acetylated LDL receptor I and II) (CD antigen CD204)
ruditapes_c22314	endocytosis	transport	P	Macrophage scavenger receptor types I and II (Macrophage acetylated LDL receptor I and II) (CD antigen CD204)
ruditapes_c22314	endocytosis	cell organization and biogenesis	P	Macrophage scavenger receptor types I and II (Macrophage acetylated LDL receptor I and II) (CD antigen CD204)
ruditapes_c22314	lipoprotein transport	transport	P	Macrophage scavenger receptor types I and II (Macrophage acetylated LDL receptor I and II) (CD antigen CD204)
ruditapes_c22314	positive regulation of foam cell differentiation	developmental processes	P	Macrophage scavenger receptor types I and II (Macrophage acetylated LDL receptor I and II) (CD antigen CD204)
ruditapes_c22314	positive regulation of cholesterol storage	other biological processes	P	Macrophage scavenger receptor types I and II (Macrophage acetylated LDL receptor I and II) (CD antigen CD204)
ruditapes_c22314	cholesterol transport	transport	P	Macrophage scavenger receptor types I and II (Macrophage acetylated LDL receptor I and II) (CD antigen CD204)
ruditapes_c22314	lipoprotein particle clearance	cell organization and biogenesis	P	Macrophage scavenger receptor types I and II (Macrophage acetylated LDL receptor I and II) (CD antigen CD204)
ruditapes2_c1422	peptidyl-threonine phosphorylation	protein metabolism	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	negative regulation of insulin receptor signaling pathway	signal transduction	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	interleukin-12 production	other biological processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	cytokine-mediated signaling pathway	signal transduction	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	platelet activation	stress response	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	negative regulation of glial cell apoptosis	death	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	phosphorylation	other metabolic processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	gene expression	other metabolic processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	negative regulation of MAP kinase activity	other metabolic processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	signal transduction	signal transduction	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	mRNA metabolic process	RNA metabolism	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	apoptosis	death	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	interleukin-10 production	other biological processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	interferon-gamma-mediated signaling pathway	signal transduction	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	nerve growth factor receptor signaling pathway	signal transduction	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	immunoglobulin mediated immune response	other biological processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	regulation of receptor activity	other biological processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	activation of phospholipase C activity	other biological processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	cell structure disassembly during apoptosis	cell organization and biogenesis	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	cell structure disassembly during apoptosis	death	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	RNA metabolic process	RNA metabolism	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	epidermal growth factor receptor signaling pathway	signal transduction	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	positive regulation of protein amino acid dephosphorylation	protein metabolism	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	fibroblast growth factor receptor signaling pathway	signal transduction	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	blood coagulation	stress response	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	positive regulation of superoxide release	other metabolic processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	cell cycle	cell cycle and proliferation	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	B cell proliferation	cell cycle and proliferation	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	neutrophil activation	other biological processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	protein stabilization	protein metabolism	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	negative regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	negative regulation of filopodium assembly	cell organization and biogenesis	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	protein amino acid phosphorylation	protein metabolism	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	negative regulation of inflammatory response	stress response	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	positive regulation of catalytic activity	other biological processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	negative regulation of actin filament polymerization	protein metabolism	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	negative regulation of actin filament polymerization	cell organization and biogenesis	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes2_c1422	negative regulation of protein binding	other biological processes	P	Protein kinase C delta type (EC 2.7.11.13) (Tyrosine-protein kinase PRKCD) (EC 2.7.10.2) (nPKC-delta) [Cleaved into: Protein kinase C delta type regulatory subunit; Protein kinase C delta type catalytic subunit (Sphingosine-dependent protein kinase-1) (SDK1)]
ruditapes_c8714	G-protein coupled receptor protein signaling pathway	signal transduction	P	Pheromone B alpha 2 receptor
ruditapes_c8714	response to pheromone	other biological processes	P	Pheromone B alpha 2 receptor
ruditapes_c8714	signal transduction	signal transduction	P	Pheromone B alpha 2 receptor
ruditapes_c17720	regulation of termination of mating projection growth	cell organization and biogenesis	P	Nuclear fusion protein FUS2
ruditapes_c17720	cytogamy	other biological processes	P	Nuclear fusion protein FUS2
ruditapes_c17720	karyogamy during conjugation with cellular fusion	cell organization and biogenesis	P	Nuclear fusion protein FUS2
ruditapes_c17720	regulation of Rho protein signal transduction	signal transduction	P	Nuclear fusion protein FUS2
ruditapes_c4455	heterophilic cell adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	cell adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	positive regulation of cell-cell adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	homophilic cell adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	leukocyte adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	nervous system development	developmental processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	homotypic cell-cell adhesion	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	cell surface receptor linked signal transduction	signal transduction	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	axon guidance	developmental processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	axon guidance	cell organization and biogenesis	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	cell differentiation	other biological processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	multicellular organismal development	developmental processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	neuron projection development	developmental processes	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	neuron projection development	cell organization and biogenesis	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	positive regulation of calcium-mediated signaling	signal transduction	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c4455	cell-cell adhesion mediated by integrin	cell adhesion	P	Neural cell adhesion molecule L1 (N-CAM-L1) (NCAM-L1) (Nerve-growth factor-inducible large external glycoprotein) (NILE) (CD antigen CD171)
ruditapes_c11290	metabolic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes_c11290	histidine biosynthetic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes_c11290	cellular amino acid biosynthetic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes2_c2875	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(XIV) chain (Undulin)
ruditapes2_c2875	cell adhesion	cell adhesion	P	Collagen alpha-1(XIV) chain (Undulin)
ruditapes2_c2875	cell-cell adhesion	cell adhesion	P	Collagen alpha-1(XIV) chain (Undulin)
ruditapes2_c2875	extracellular matrix organization	cell organization and biogenesis	P	Collagen alpha-1(XIV) chain (Undulin)
ruditapes_c10372	tissue homeostasis	other biological processes	P	Collagen alpha-1(IX) chain
ruditapes_c10372	cell adhesion	cell adhesion	P	Collagen alpha-1(IX) chain
ruditapes_c10372	cartilage development	developmental processes	P	Collagen alpha-1(IX) chain
ruditapes_c24814	actin filament organization	cell organization and biogenesis	P	Epsin-2
ruditapes_c24814	actin cortical patch assembly	cell organization and biogenesis	P	Epsin-2
ruditapes_c24814	endocytosis	transport	P	Epsin-2
ruditapes_c24814	endocytosis	cell organization and biogenesis	P	Epsin-2
ruditapes_c2088	extracellular matrix organization	cell organization and biogenesis	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c2088	endochondral ossification	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c2088	cartilage development involved in endochondral bone morphogenesis	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c2088	cardiac muscle tissue development	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c2088	angiogenesis	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c2088	embryonic skeletal system morphogenesis	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c2088	protein localization	other biological processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c2088	chondrocyte differentiation	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c2088	brain development	developmental processes	P	Basement membrane-specific heparan sulfate proteoglycan core protein (HSPG) [Cleaved into: Endorepellin; LG3 peptide]
ruditapes_c30702	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)] (Fragments)
ruditapes_c30702	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)] (Fragments)
ruditapes_c30702	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)] (Fragments)
ruditapes_c30702	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)] (Fragments)
ruditapes_c30702	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)] (Fragments)
ruditapes_c30702	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)] (Fragments)
ruditapes_c30702	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)] (Fragments)
ruditapes_c30702	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)] (Fragments)
ruditapes_c30702	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1-2A (PX); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2BC; Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3ABCD (P3); Protein 3ABC; Protein 3AB; Protein 3A (P3A); Protein 3B (P3B) (VPg); Protein 3CD; Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)] (Fragments)
ruditapes_c8309	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes_c16183	translation	protein metabolism	P	Elongation factor Ts (EF-Ts)
ruditapes_c16183	translational elongation	protein metabolism	P	Elongation factor Ts (EF-Ts)
ruditapes_c27027	transport	transport	P	NADH-quinone oxidoreductase subunit C/D (EC 1.6.99.5) (NADH dehydrogenase I subunit C/D) (NDH-1 subunit C/D)
ruditapes_c27027	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit C/D (EC 1.6.99.5) (NADH dehydrogenase I subunit C/D) (NDH-1 subunit C/D)
ruditapes_c27027	metabolic process	other metabolic processes	P	NADH-quinone oxidoreductase subunit C/D (EC 1.6.99.5) (NADH dehydrogenase I subunit C/D) (NDH-1 subunit C/D)
ruditapes_c27284	lipid transport	transport	P	Vitellogenin [Cleaved into: YP47; YP160]
ruditapes_c15812	mitochondrial respiratory chain complex assembly	cell organization and biogenesis	P	Cytochrome oxidase assembly factor 4 (Cx9C motif-containing protein 3)
ruditapes_c15812	mitochondrial respiratory chain complex IV assembly	cell organization and biogenesis	P	Cytochrome oxidase assembly factor 4 (Cx9C motif-containing protein 3)
ruditapes_lrc32217	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34437	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35569	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32178	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35132	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35132	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35184	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35184	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4678	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34861	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc5220	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35345	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc3391	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34437	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32178	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32178	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32178	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35569	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4678	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4678	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc5220	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc3391	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35132	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4678	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35345	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34582	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32178	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc3391	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc3391	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc3391	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32217	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35345	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35345	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35345	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35184	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34861	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34582	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35184	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34437	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32217	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4129	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35569	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4678	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32178	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35132	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc5220	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc5220	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34437	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc5220	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32217	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34582	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4129	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4678	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34861	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34861	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34437	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34437	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35184	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32217	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35569	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34861	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34582	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34582	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc5220	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc3391	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32217	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32217	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4129	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35345	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34861	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32178	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34861	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34582	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34582	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34437	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc5220	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35569	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35569	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc3391	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34437	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35132	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35184	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4129	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35184	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35345	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc3391	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4129	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4129	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35345	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35132	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35569	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34861	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4678	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32217	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35132	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35132	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc5220	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35184	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc34582	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4678	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc35569	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_lrc32178	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4129	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes2_lrc4129	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c13735	hindlimb morphogenesis	developmental processes	P	Formin-1 (Limb deformity protein)
ruditapes_c13735	gene expression	other metabolic processes	P	Formin-1 (Limb deformity protein)
ruditapes_c13735	cellular component organization	cell organization and biogenesis	P	Formin-1 (Limb deformity protein)
ruditapes_c13735	skeletal system morphogenesis	developmental processes	P	Formin-1 (Limb deformity protein)
ruditapes_c13735	positive regulation of actin filament polymerization	protein metabolism	P	Formin-1 (Limb deformity protein)
ruditapes_c13735	positive regulation of actin filament polymerization	cell organization and biogenesis	P	Formin-1 (Limb deformity protein)
ruditapes_c13735	actin cytoskeleton organization	cell organization and biogenesis	P	Formin-1 (Limb deformity protein)
ruditapes_c13735	positive regulation of actin nucleation	cell organization and biogenesis	P	Formin-1 (Limb deformity protein)
ruditapes_c13735	forelimb morphogenesis	developmental processes	P	Formin-1 (Limb deformity protein)
ruditapes_c13241	gluconeogenesis	other metabolic processes	P	Phosphoenolpyruvate carboxykinase [GTP] (PEPCK) (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase)
ruditapes_c20334	transport	transport	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	monoamine transport	transport	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	negative regulation of neurotransmitter transport	transport	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	insulin secretion	transport	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	insulin secretion	cell-cell signaling	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	synaptic vesicle amine transport	transport	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	response to zinc ion	other biological processes	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	response to toxin	other biological processes	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	response to starvation	stress response	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	neurotransmitter secretion	transport	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	neurotransmitter secretion	cell-cell signaling	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	transmembrane transport	transport	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	glucose homeostasis	other biological processes	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	post-embryonic development	developmental processes	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	locomotory behavior	other biological processes	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	response to metal ion	other biological processes	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	response to corticosterone stimulus	other biological processes	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	death	death	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	synaptic transmission	cell-cell signaling	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	response to drug	other biological processes	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	serotonin transport	transport	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	aging	other biological processes	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	endocytic recycling	transport	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	response to cocaine	other biological processes	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	response to herbicide	stress response	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	neurotransmitter transport	transport	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c20334	response to amphetamine	other biological processes	P	Synaptic vesicular amine transporter (Monoamine transporter) (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2)
ruditapes_c7176	transport	transport	P	Ras-related protein Rab-1A
ruditapes_c7176	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-1A
ruditapes_c7176	protein transport	transport	P	Ras-related protein Rab-1A
ruditapes_c7176	vesicle-mediated transport	transport	P	Ras-related protein Rab-1A
ruditapes_c11568	"transcription, DNA-dependent"	RNA metabolism	P	Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)
ruditapes_c11568	RNA biosynthetic process	RNA metabolism	P	Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)
ruditapes_c11568	mRNA methylation	RNA metabolism	P	Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)
ruditapes_c11568	viral genome replication	other biological processes	P	Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)
ruditapes_c11568	RNA processing	RNA metabolism	P	Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)
ruditapes_c30508	biological_process	other biological processes	P	DC-STAMP domain-containing protein 1
ruditapes_c12228	positive regulation of dendrite morphogenesis	developmental processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c12228	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c23638	positive regulation of dendrite morphogenesis	developmental processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c23638	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c8018	negative regulation of translation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c7518	cell differentiation	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c8018	positive regulation of dendrite morphogenesis	developmental processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c8018	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c12228	negative regulation of cell growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c13300	positive regulation of dendrite morphogenesis	developmental processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c13300	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c7518	negative regulation of translation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c23638	negative regulation of translation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c23638	cell differentiation	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c7518	negative regulation of cell growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c12228	cell differentiation	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c23638	regulation of growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c12228	regulation of growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c8018	negative regulation of cell growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c12228	negative regulation of translation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c7518	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c13300	negative regulation of translation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c8018	cell differentiation	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c13300	negative regulation of cell growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c23638	negative regulation of cell growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c8018	regulation of growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c13300	cell differentiation	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c7518	regulation of growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c13300	regulation of growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes_c7518	positive regulation of dendrite morphogenesis	developmental processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)
ruditapes2_c2226	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit E-A (eIF3e-A) (Eukaryotic translation initiation factor 3 subunit 6-A)
ruditapes2_c2226	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit E-A (eIF3e-A) (Eukaryotic translation initiation factor 3 subunit 6-A)
ruditapes_c18845	biological_process	other biological processes	P	Echinoderm microtubule-associated protein-like 1 (EMAP-1)
ruditapes_c822	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_c27103	tRNA processing	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c10351	cell cycle	cell cycle and proliferation	P	Uncharacterized membrane protein YPR109W
ruditapes_c10351	biological_process	other biological processes	P	Uncharacterized membrane protein YPR109W
ruditapes_c27034	ascospore wall assembly	cell organization and biogenesis	P	Sporulation-specific protein 77
ruditapes_c27034	ascospore formation	other biological processes	P	Sporulation-specific protein 77
ruditapes_c27034	sporulation resulting in formation of a cellular spore	other biological processes	P	Sporulation-specific protein 77
ruditapes_c14486	biological_process	other biological processes	P	Uncharacterized protein YLR257W
ruditapes_c4303	melanin biosynthetic process	other metabolic processes	P	Melanocyte protein PMEL (Melanocyte protein Pmel 17) (Premelanosome protein) (Retinal pigment epithelial-specific protein) (Silver locus protein homolog) [Cleaved into: M-alpha; M-beta]
ruditapes_c31659	melanin biosynthetic process	other metabolic processes	P	Melanocyte protein PMEL (Melanocyte protein Pmel 17) (Premelanosome protein) (Retinal pigment epithelial-specific protein) (Silver locus protein homolog) [Cleaved into: M-alpha; M-beta]
ruditapes2_c600	regulation of cell shape	cell organization and biogenesis	P	Protein SPH1 (SPA2 homolog 1)
ruditapes2_c600	establishment of cell polarity	cell organization and biogenesis	P	Protein SPH1 (SPA2 homolog 1)
ruditapes2_c600	pseudohyphal growth	other biological processes	P	Protein SPH1 (SPA2 homolog 1)
ruditapes2_c600	bipolar cellular bud site selection	cell organization and biogenesis	P	Protein SPH1 (SPA2 homolog 1)
ruditapes2_c600	conjugation	other biological processes	P	Protein SPH1 (SPA2 homolog 1)
ruditapes2_c600	actin filament organization	cell organization and biogenesis	P	Protein SPH1 (SPA2 homolog 1)
ruditapes2_c600	Rho protein signal transduction	signal transduction	P	Protein SPH1 (SPA2 homolog 1)
ruditapes_c21587	blood coagulation	stress response	P	Coagulation factor VIII (Procoagulant component)
ruditapes_c21817	blood coagulation	stress response	P	Coagulation factor VIII (Procoagulant component)
ruditapes_c21817	cell adhesion	cell adhesion	P	Coagulation factor VIII (Procoagulant component)
ruditapes_c21587	cell adhesion	cell adhesion	P	Coagulation factor VIII (Procoagulant component)
ruditapes_c21587	oxidation reduction	other metabolic processes	P	Coagulation factor VIII (Procoagulant component)
ruditapes_c21817	platelet activation	stress response	P	Coagulation factor VIII (Procoagulant component)
ruditapes_c21587	platelet activation	stress response	P	Coagulation factor VIII (Procoagulant component)
ruditapes_c21817	acute-phase response	stress response	P	Coagulation factor VIII (Procoagulant component)
ruditapes_c21587	acute-phase response	stress response	P	Coagulation factor VIII (Procoagulant component)
ruditapes_c21817	oxidation reduction	other metabolic processes	P	Coagulation factor VIII (Procoagulant component)
ruditapes_c26171	oxylipin biosynthetic process	other metabolic processes	P	Linoleate 9S-lipoxygenase 1 (EC 1.13.11.58) (Lipoxygenase 1) (AtLOX1)
ruditapes_c26171	root development	developmental processes	P	Linoleate 9S-lipoxygenase 1 (EC 1.13.11.58) (Lipoxygenase 1) (AtLOX1)
ruditapes_c26171	lipid biosynthetic process	other metabolic processes	P	Linoleate 9S-lipoxygenase 1 (EC 1.13.11.58) (Lipoxygenase 1) (AtLOX1)
ruditapes_c26171	lateral root primordium development	developmental processes	P	Linoleate 9S-lipoxygenase 1 (EC 1.13.11.58) (Lipoxygenase 1) (AtLOX1)
ruditapes_c26171	response to jasmonic acid stimulus	other biological processes	P	Linoleate 9S-lipoxygenase 1 (EC 1.13.11.58) (Lipoxygenase 1) (AtLOX1)
ruditapes_c26171	oxidation reduction	other metabolic processes	P	Linoleate 9S-lipoxygenase 1 (EC 1.13.11.58) (Lipoxygenase 1) (AtLOX1)
ruditapes_c26171	response to abscisic acid stimulus	other biological processes	P	Linoleate 9S-lipoxygenase 1 (EC 1.13.11.58) (Lipoxygenase 1) (AtLOX1)
ruditapes_c26171	fatty acid biosynthetic process	other metabolic processes	P	Linoleate 9S-lipoxygenase 1 (EC 1.13.11.58) (Lipoxygenase 1) (AtLOX1)
ruditapes_s36716	cellular amine metabolic process	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes_s36716	oxidation reduction	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes2_lrc3763	response to toxin	other biological processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes_s36716	heterocycle metabolic process	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes2_lrc3763	heterocycle metabolic process	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes_s36716	toxin metabolic process	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes_s36716	drug metabolic process	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes2_lrc3763	oxidation reduction	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes2_lrc3763	cellular amine metabolic process	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes2_lrc3763	drug metabolic process	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes2_lrc3763	toxin metabolic process	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes_s36716	hydrogen peroxide biosynthetic process	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes2_lrc3763	hydrogen peroxide biosynthetic process	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes_s36716	response to toxin	other biological processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes_c14448	regulation of signal transduction	signal transduction	P	Calcium-binding protein NCS-1
ruditapes_c14448	positive regulation of catalytic activity	other biological processes	P	Calcium-binding protein NCS-1
ruditapes_s37557	oxidation reduction	other metabolic processes	P	3-oxosteroid 1-dehydrogenase (EC 1.3.99.4)
ruditapes_s37557	lipid metabolic process	other metabolic processes	P	3-oxosteroid 1-dehydrogenase (EC 1.3.99.4)
ruditapes_s37557	steroid metabolic process	other metabolic processes	P	3-oxosteroid 1-dehydrogenase (EC 1.3.99.4)
ruditapes_c15866	biological_process	other biological processes	P	DOCK-like protein YLR422W
ruditapes_c19575	biological_process	other biological processes	P	DOCK-like protein YLR422W
ruditapes_c30138	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor SPP382 (CLF1 complex factor 8) (Nineteen complex-related protein 1) (NTC-related protein 1) (Suppressor of PRP38 protein 2)
ruditapes_c30138	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Pre-mRNA-splicing factor SPP382 (CLF1 complex factor 8) (Nineteen complex-related protein 1) (NTC-related protein 1) (Suppressor of PRP38 protein 2)
ruditapes_c30138	spliceosome disassembly	RNA metabolism	P	Pre-mRNA-splicing factor SPP382 (CLF1 complex factor 8) (Nineteen complex-related protein 1) (NTC-related protein 1) (Suppressor of PRP38 protein 2)
ruditapes_c30138	spliceosome disassembly	cell organization and biogenesis	P	Pre-mRNA-splicing factor SPP382 (CLF1 complex factor 8) (Nineteen complex-related protein 1) (NTC-related protein 1) (Suppressor of PRP38 protein 2)
ruditapes_c30138	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor SPP382 (CLF1 complex factor 8) (Nineteen complex-related protein 1) (NTC-related protein 1) (Suppressor of PRP38 protein 2)
ruditapes_c30138	generation of catalytic spliceosome for first transesterification step	RNA metabolism	P	Pre-mRNA-splicing factor SPP382 (CLF1 complex factor 8) (Nineteen complex-related protein 1) (NTC-related protein 1) (Suppressor of PRP38 protein 2)
ruditapes_c30138	generation of catalytic spliceosome for first transesterification step	cell organization and biogenesis	P	Pre-mRNA-splicing factor SPP382 (CLF1 complex factor 8) (Nineteen complex-related protein 1) (NTC-related protein 1) (Suppressor of PRP38 protein 2)
ruditapes_c3933	negative regulation of lymphocyte activation	other biological processes	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	natural killer cell differentiation	developmental processes	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	substrate adhesion-dependent cell spreading	cell adhesion	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	substrate adhesion-dependent cell spreading	cell organization and biogenesis	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	cell adhesion	cell adhesion	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	protein amino acid autophosphorylation	protein metabolism	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	ovulation cycle	other biological processes	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	apoptotic cell clearance	transport	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	apoptotic cell clearance	cell organization and biogenesis	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	vagina development	other biological processes	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	platelet activation	stress response	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	secretion by cell	transport	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	forebrain cell migration	developmental processes	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	protein kinase B signaling cascade	signal transduction	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	signal transduction	signal transduction	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	spermatogenesis	other biological processes	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c3933	negative regulation of neuron apoptosis	death	P	Tyrosine-protein kinase receptor TYRO3 (EC 2.7.10.1) (Tyrosine-protein kinase BYK) (Tyrosine-protein kinase DTK) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase SKY) (Tyrosine-protein kinase TIF)
ruditapes_c18751	multicellular organismal development	developmental processes	P	"N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase, isoform B (N-acetylglucosaminyltransferase) (EC 2.4.1.150) (I-branching enzyme) (IGNT)"
ruditapes_c18751	glycosaminoglycan biosynthetic process	other metabolic processes	P	"N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase, isoform B (N-acetylglucosaminyltransferase) (EC 2.4.1.150) (I-branching enzyme) (IGNT)"
ruditapes_c17972	multicellular organismal development	developmental processes	P	Protein Wnt-5a
ruditapes_c17972	Wnt receptor signaling pathway	signal transduction	P	Protein Wnt-5a
ruditapes_c5462	biological_process	other biological processes	P	F-box protein YLR352W
ruditapes_s40154	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_s40154	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_s40154	viral reproduction	other biological processes	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_s40154	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_s40154	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_s40154	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c2621	rRNA modification	RNA metabolism	P	Ribosomal RNA-processing protein 9
ruditapes_c2621	ribosome biogenesis	other biological processes	P	Ribosomal RNA-processing protein 9
ruditapes_c2621	rRNA processing	RNA metabolism	P	Ribosomal RNA-processing protein 9
ruditapes_lrc15071	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (C/EBP-related ATF) (C/ATF) (Tax-responsive enhancer element-binding protein 67 homolog) (TaxREB67 homolog)
ruditapes_lrc38110	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (C/EBP-related ATF) (C/ATF) (Tax-responsive enhancer element-binding protein 67 homolog) (TaxREB67 homolog)
ruditapes_lrc15071	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (C/EBP-related ATF) (C/ATF) (Tax-responsive enhancer element-binding protein 67 homolog) (TaxREB67 homolog)
ruditapes_lrc38110	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (C/EBP-related ATF) (C/ATF) (Tax-responsive enhancer element-binding protein 67 homolog) (TaxREB67 homolog)
ruditapes_lrc38110	gluconeogenesis	other metabolic processes	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (C/EBP-related ATF) (C/ATF) (Tax-responsive enhancer element-binding protein 67 homolog) (TaxREB67 homolog)
ruditapes_lrc15071	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (C/EBP-related ATF) (C/ATF) (Tax-responsive enhancer element-binding protein 67 homolog) (TaxREB67 homolog)
ruditapes_lrc38110	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (C/EBP-related ATF) (C/ATF) (Tax-responsive enhancer element-binding protein 67 homolog) (TaxREB67 homolog)
ruditapes_lrc15071	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (C/EBP-related ATF) (C/ATF) (Tax-responsive enhancer element-binding protein 67 homolog) (TaxREB67 homolog)
ruditapes_lrc38110	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (C/EBP-related ATF) (C/ATF) (Tax-responsive enhancer element-binding protein 67 homolog) (TaxREB67 homolog)
ruditapes_lrc15071	gluconeogenesis	other metabolic processes	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (C/EBP-related ATF) (C/ATF) (Tax-responsive enhancer element-binding protein 67 homolog) (TaxREB67 homolog)
ruditapes_c22890	lipid metabolic process	other metabolic processes	P	Bile salt sulfotransferase (EC 2.8.2.14) (Dehydroepiandrosterone sulfotransferase) (DHEA-ST) (Hydroxysteroid Sulfotransferase) (HST) (ST2) (ST2A3) (Sulfotransferase 2A1) (ST2A1)
ruditapes_c22890	cellular lipid metabolic process	other metabolic processes	P	Bile salt sulfotransferase (EC 2.8.2.14) (Dehydroepiandrosterone sulfotransferase) (DHEA-ST) (Hydroxysteroid Sulfotransferase) (HST) (ST2) (ST2A3) (Sulfotransferase 2A1) (ST2A1)
ruditapes_c22890	digestion	other biological processes	P	Bile salt sulfotransferase (EC 2.8.2.14) (Dehydroepiandrosterone sulfotransferase) (DHEA-ST) (Hydroxysteroid Sulfotransferase) (HST) (ST2) (ST2A3) (Sulfotransferase 2A1) (ST2A1)
ruditapes_c22890	bile acid catabolic process	other metabolic processes	P	Bile salt sulfotransferase (EC 2.8.2.14) (Dehydroepiandrosterone sulfotransferase) (DHEA-ST) (Hydroxysteroid Sulfotransferase) (HST) (ST2) (ST2A3) (Sulfotransferase 2A1) (ST2A1)
ruditapes_c22890	xenobiotic metabolic process	other metabolic processes	P	Bile salt sulfotransferase (EC 2.8.2.14) (Dehydroepiandrosterone sulfotransferase) (DHEA-ST) (Hydroxysteroid Sulfotransferase) (HST) (ST2) (ST2A3) (Sulfotransferase 2A1) (ST2A1)
ruditapes_c22890	steroid metabolic process	other metabolic processes	P	Bile salt sulfotransferase (EC 2.8.2.14) (Dehydroepiandrosterone sulfotransferase) (DHEA-ST) (Hydroxysteroid Sulfotransferase) (HST) (ST2) (ST2A3) (Sulfotransferase 2A1) (ST2A1)
ruditapes_c22890	sulfation	other metabolic processes	P	Bile salt sulfotransferase (EC 2.8.2.14) (Dehydroepiandrosterone sulfotransferase) (DHEA-ST) (Hydroxysteroid Sulfotransferase) (HST) (ST2) (ST2A3) (Sulfotransferase 2A1) (ST2A1)
ruditapes_c22890	3'-phosphoadenosine 5'-phosphosulfate metabolic process	other metabolic processes	P	Bile salt sulfotransferase (EC 2.8.2.14) (Dehydroepiandrosterone sulfotransferase) (DHEA-ST) (Hydroxysteroid Sulfotransferase) (HST) (ST2) (ST2A3) (Sulfotransferase 2A1) (ST2A1)
ruditapes_s38529	DNA repair	stress response	P	40S ribosomal protein S3
ruditapes_s38529	DNA repair	DNA metabolism	P	40S ribosomal protein S3
ruditapes_s38529	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_s38529	response to DNA damage stimulus	stress response	P	40S ribosomal protein S3
ruditapes_s38529	negative regulation of neuron apoptosis	death	P	40S ribosomal protein S3
ruditapes_s38529	mitosis	cell cycle and proliferation	P	40S ribosomal protein S3
ruditapes_s38529	mitosis	cell organization and biogenesis	P	40S ribosomal protein S3
ruditapes_c22522	hibernation	other biological processes	P	Hibernation-associated plasma protein HP-27 (Hibernator-specific blood complex 27 kDa subunit)
ruditapes_c22804	hibernation	other biological processes	P	Hibernation-associated plasma protein HP-27 (Hibernator-specific blood complex 27 kDa subunit)
ruditapes2_c2907	hibernation	other biological processes	P	Hibernation-associated plasma protein HP-27 (Hibernator-specific blood complex 27 kDa subunit)
ruditapes_c22958	hibernation	other biological processes	P	Hibernation-associated plasma protein HP-27 (Hibernator-specific blood complex 27 kDa subunit)
ruditapes2_lrc4216	hibernation	other biological processes	P	Hibernation-associated plasma protein HP-27 (Hibernator-specific blood complex 27 kDa subunit)
ruditapes_c29651	pathogenesis	other biological processes	P	Pyocin-S1 (EC 3.1.-.-) (Killer protein)
ruditapes_c29651	cytolysis	death	P	Pyocin-S1 (EC 3.1.-.-) (Killer protein)
ruditapes_c29651	response to bacterium	other biological processes	P	Pyocin-S1 (EC 3.1.-.-) (Killer protein)
ruditapes_c29651	defense response to bacterium	stress response	P	Pyocin-S1 (EC 3.1.-.-) (Killer protein)
ruditapes_c13326	antimonite transport	transport	P	Arsenical-resistance protein 3
ruditapes_c13326	sodium ion transport	transport	P	Arsenical-resistance protein 3
ruditapes_c13326	transport	transport	P	Arsenical-resistance protein 3
ruditapes_c13326	response to arsenic	other biological processes	P	Arsenical-resistance protein 3
ruditapes_c13326	arsenite transport	transport	P	Arsenical-resistance protein 3
ruditapes_c7849	DNA recombination	DNA metabolism	P	Mitochondrial homologous recombination protein 1 (Cross-linked transcription component 1)
ruditapes_c7849	cellular response to oxidative stress	stress response	P	Mitochondrial homologous recombination protein 1 (Cross-linked transcription component 1)
ruditapes_c7849	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mitochondrial homologous recombination protein 1 (Cross-linked transcription component 1)
ruditapes_c7849	mitochondrial genome maintenance	cell organization and biogenesis	P	Mitochondrial homologous recombination protein 1 (Cross-linked transcription component 1)
ruditapes_c7849	"transcription, DNA-dependent"	RNA metabolism	P	Mitochondrial homologous recombination protein 1 (Cross-linked transcription component 1)
ruditapes_c15876	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c15876	regulation of DNA replication during S phase	cell cycle and proliferation	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c15876	regulation of DNA replication during S phase	DNA metabolism	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c15876	chromatin modification	cell organization and biogenesis	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c15876	nucleosome positioning	cell organization and biogenesis	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c15876	"transcription, DNA-dependent"	RNA metabolism	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c15876	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c15876	regulation of cell cycle	cell cycle and proliferation	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c15876	ATP-dependent chromatin remodeling	cell organization and biogenesis	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c15876	nucleosome disassembly	cell organization and biogenesis	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c15876	G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c15876	RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
ruditapes_c23053	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	F-box protein YDR306C
ruditapes_c23053	protein ubiquitination	protein metabolism	P	F-box protein YDR306C
ruditapes_c12222	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase PIB1 (EC 6.3.2.-) (Phosphatidylinositol 3-phosphate-binding protein 1)
ruditapes_c10398	response to DNA damage stimulus	stress response	P	Protein HIM1 (High induction of mutagenesis protein 1)
ruditapes_c10398	DNA repair	stress response	P	Protein HIM1 (High induction of mutagenesis protein 1)
ruditapes_c10398	DNA repair	DNA metabolism	P	Protein HIM1 (High induction of mutagenesis protein 1)
ruditapes_lrc22700	apoptosis	death	P	GRAM domain-containing protein YSP2 (Yeast suicide protein 2)
ruditapes_c12359	apoptosis	death	P	GRAM domain-containing protein YSP2 (Yeast suicide protein 2)
ruditapes_c14968	biological_process	other biological processes	P	Putative ATP-dependent RNA helicase YLR419W (EC 3.6.4.13)
ruditapes2_c2751	sodium ion transport	transport	P	Glutaconyl-CoA decarboxylase subunit alpha (EC 4.1.1.70) (Carboxyltransferase)
ruditapes2_c2751	ion transport	transport	P	Glutaconyl-CoA decarboxylase subunit alpha (EC 4.1.1.70) (Carboxyltransferase)
ruditapes2_c2751	transport	transport	P	Glutaconyl-CoA decarboxylase subunit alpha (EC 4.1.1.70) (Carboxyltransferase)
ruditapes_c18450	regulation of fatty acid metabolic process	other metabolic processes	P	Phosphatidylinositol transfer protein CSR1 (CHS5 SPA2 rescue protein 1) (SEC14 homolog protein 2)
ruditapes_c18450	lipid metabolic process	other metabolic processes	P	Phosphatidylinositol transfer protein CSR1 (CHS5 SPA2 rescue protein 1) (SEC14 homolog protein 2)
ruditapes_c18450	phospholipid transport	transport	P	Phosphatidylinositol transfer protein CSR1 (CHS5 SPA2 rescue protein 1) (SEC14 homolog protein 2)
ruditapes_c18450	ER-associated protein catabolic process	protein metabolism	P	Phosphatidylinositol transfer protein CSR1 (CHS5 SPA2 rescue protein 1) (SEC14 homolog protein 2)
ruditapes_c18450	phospholipid catabolic process	other metabolic processes	P	Phosphatidylinositol transfer protein CSR1 (CHS5 SPA2 rescue protein 1) (SEC14 homolog protein 2)
ruditapes_c18450	fungal-type cell wall organization	cell organization and biogenesis	P	Phosphatidylinositol transfer protein CSR1 (CHS5 SPA2 rescue protein 1) (SEC14 homolog protein 2)
ruditapes_c18450	lipid transport	transport	P	Phosphatidylinositol transfer protein CSR1 (CHS5 SPA2 rescue protein 1) (SEC14 homolog protein 2)
ruditapes_c18450	transport	transport	P	Phosphatidylinositol transfer protein CSR1 (CHS5 SPA2 rescue protein 1) (SEC14 homolog protein 2)
ruditapes_c21727	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Elongator complex protein 1 (Gamma-toxin target 1) (Protein IKI3)
ruditapes_c21727	transport	transport	P	Elongator complex protein 1 (Gamma-toxin target 1) (Protein IKI3)
ruditapes_c21727	protein transport	transport	P	Elongator complex protein 1 (Gamma-toxin target 1) (Protein IKI3)
ruditapes_c21727	"transcription, DNA-dependent"	RNA metabolism	P	Elongator complex protein 1 (Gamma-toxin target 1) (Protein IKI3)
ruditapes_c21727	tRNA wobble uridine modification	RNA metabolism	P	Elongator complex protein 1 (Gamma-toxin target 1) (Protein IKI3)
ruditapes_c21727	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Elongator complex protein 1 (Gamma-toxin target 1) (Protein IKI3)
ruditapes2_c2416	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes_c11922	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes2_c2544	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes2_c2544	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes_c11922	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes2_c2416	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes_c16954	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes_c16954	angiogenesis	developmental processes	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes_c11922	angiogenesis	developmental processes	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes2_c2544	angiogenesis	developmental processes	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes2_c2416	angiogenesis	developmental processes	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes_c16954	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)
ruditapes_c11266	metabolic process	other metabolic processes	P	"Exoglucanase 1 (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Exocellobiohydrolase I) (Exoglucanase I)"
ruditapes_c12985	cellulose catabolic process	other metabolic processes	P	"Exoglucanase 1 (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Exocellobiohydrolase I) (Exoglucanase I)"
ruditapes_c12985	metabolic process	other metabolic processes	P	"Exoglucanase 1 (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Exocellobiohydrolase I) (Exoglucanase I)"
ruditapes_c11266	carbohydrate metabolic process	other metabolic processes	P	"Exoglucanase 1 (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Exocellobiohydrolase I) (Exoglucanase I)"
ruditapes_c11266	polysaccharide catabolic process	other metabolic processes	P	"Exoglucanase 1 (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Exocellobiohydrolase I) (Exoglucanase I)"
ruditapes_c11266	cellulose catabolic process	other metabolic processes	P	"Exoglucanase 1 (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Exocellobiohydrolase I) (Exoglucanase I)"
ruditapes_c12985	polysaccharide catabolic process	other metabolic processes	P	"Exoglucanase 1 (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Exocellobiohydrolase I) (Exoglucanase I)"
ruditapes_c12985	carbohydrate metabolic process	other metabolic processes	P	"Exoglucanase 1 (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Exocellobiohydrolase I) (Exoglucanase I)"
ruditapes_c15158	interspecies interaction between organisms	other biological processes	P	Outer capsid protein VP2
ruditapes_c28736	methylation	other metabolic processes	P	Nicotinamide N-methyltransferase (EC 2.1.1.1)
ruditapes_c26607	ion transport	transport	P	"ATP synthase subunit b, chloroplastic (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes_c26607	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit b, chloroplastic (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes_c26607	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, chloroplastic (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes_c26607	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, chloroplastic (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes_c26607	transport	transport	P	"ATP synthase subunit b, chloroplastic (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes_c26607	proton transport	transport	P	"ATP synthase subunit b, chloroplastic (ATP synthase F(0) sector subunit b) (ATPase subunit I)"
ruditapes_c9538	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta') (RNA polymerase subunit beta')
ruditapes_c5881	ATP synthesis coupled electron transport	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c5881	transport	transport	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c5881	oxidation reduction	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c28203	lipid catabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes2_c295	lipid metabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes_c28203	lipid metabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes2_c295	lipid catabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes_lrc11238	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta') (RNA polymerase subunit beta')
ruditapes_lrc28378	translation	protein metabolism	P	"30S ribosomal protein S11, chloroplastic"
ruditapes_c16386	translation	protein metabolism	P	"30S ribosomal protein S19, chloroplastic"
ruditapes_c27927	translation	protein metabolism	P	"50S ribosomal protein L32, chloroplastic"
ruditapes_c10757	translation	protein metabolism	P	"30S ribosomal protein S18, chloroplastic"
ruditapes2_c2768	transport	transport	P	5-hydroxyisourate hydrolase (HIU hydrolase) (HIUHase) (EC 3.5.2.17) (Transthyretin-related protein)
ruditapes2_c2768	purine base metabolic process	other metabolic processes	P	5-hydroxyisourate hydrolase (HIU hydrolase) (HIUHase) (EC 3.5.2.17) (Transthyretin-related protein)
ruditapes_c13439	proton transport	transport	P	Chloroplast envelope membrane protein
ruditapes_c13439	ion transport	transport	P	Chloroplast envelope membrane protein
ruditapes_c13439	transport	transport	P	Chloroplast envelope membrane protein
ruditapes_c26197	translation	protein metabolism	P	"30S ribosomal protein S4, chloroplastic"
ruditapes_c29270	proteolysis	protein metabolism	P	Caspase-like protein
ruditapes_c2586	lung development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of epithelial to mesenchymal transition	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of epithelial to mesenchymal transition	cell organization and biogenesis	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of neuron differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	multicellular organismal development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	regulation of epithelial cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	anagen	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	neural tube development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	compartment specification	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	foregut morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of oligodendrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	regulation of cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	sprouting angiogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	regulation of neurogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of neuroblast proliferation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	branching morphogenesis of a tube	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of apoptosis	death	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of glial cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of glial cell proliferation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	neuron fate commitment	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	Notch signaling pathway	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of cell death	death	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	cell fate specification	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of epithelial cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	oligodendrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of neuroblast proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	cell differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	cell differentiation in spinal cord	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	"transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	regulation of developmental process	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of photoreceptor cell differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	spermatogenesis	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	organ regeneration	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of endothelial cell differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	liver development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	tissue regeneration	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of transcription of Notch receptor target	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of transcription of Notch receptor target	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	cell fate commitment	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	axonogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	axonogenesis	cell organization and biogenesis	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of keratinocyte differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	response to lipopolysaccharide	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	endoderm development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of apoptosis	death	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	tissue regeneration	stress response	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of cell proliferation	cell cycle and proliferation	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of cell differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	astrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	epithelial to mesenchymal transition	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	epithelial to mesenchymal transition	cell organization and biogenesis	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	embryonic limb morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	epidermis development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	somatic stem cell division	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of myoblast differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	regulation of somitogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	determination of left/right symmetry	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	response to corticosteroid stimulus	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of glial cell differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of astrocyte differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	regulation of gene expression	other metabolic processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	glial cell differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of calcium ion-dependent exocytosis	transport	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	keratinocyte differentiation	other biological processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	hair follicle morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	auditory receptor cell fate commitment	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	heart development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	negative regulation of cell-substrate adhesion	cell adhesion	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of JAK-STAT cascade	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	neuron differentiation	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	positive regulation of BMP signaling pathway	signal transduction	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	embryonic development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	in utero embryonic development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	forebrain development	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c2586	embryonic hindlimb morphogenesis	developmental processes	P	Neurogenic locus notch homolog protein 1 (Notch 1) [Cleaved into: Notch 1 extracellular truncation; Notch 1 intracellular domain (NICD)]
ruditapes_c12801	response to stimulus	other biological processes	P	Head-specific guanylate cyclase (EC 4.6.1.2) (Gycalpha99B)
ruditapes_c12801	rhodopsin mediated phototransduction	other biological processes	P	Head-specific guanylate cyclase (EC 4.6.1.2) (Gycalpha99B)
ruditapes_c12801	visual perception	other biological processes	P	Head-specific guanylate cyclase (EC 4.6.1.2) (Gycalpha99B)
ruditapes_c12801	cyclic nucleotide biosynthetic process	other metabolic processes	P	Head-specific guanylate cyclase (EC 4.6.1.2) (Gycalpha99B)
ruditapes_c12801	cGMP biosynthetic process	other metabolic processes	P	Head-specific guanylate cyclase (EC 4.6.1.2) (Gycalpha99B)
ruditapes_c12801	positive phototaxis	other biological processes	P	Head-specific guanylate cyclase (EC 4.6.1.2) (Gycalpha99B)
ruditapes_c24674	metabolic process	other metabolic processes	P	UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase)
ruditapes_c21281	metabolic process	other metabolic processes	P	UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase)
ruditapes_c34063	oxidation reduction	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes2_c999	superoxide metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes2_c999	oxidation reduction	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c34063	superoxide metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c31779	single fertilization	other biological processes	P	Zona pellucida sperm-binding protein 4 (Zona pellucida glycoprotein 3-alpha) (Zp-3-alpha) (Zp3-alpha) (Zona pellucida glycoprotein 4) (Zp-4) (Zona pellucida protein B) [Cleaved into: Processed zona pellucida sperm-binding protein 4]
ruditapes_lrc25338	proteolysis	protein metabolism	P	Snake venom serine protease (SVSP) (EC 3.4.21.-)
ruditapes_c18105	regulation of translation	protein metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c16191	mRNA catabolic process	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c18105	mRNA metabolic process	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c16191	T cell differentiation in the thymus	developmental processes	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c16191	gene expression	other metabolic processes	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c18105	RNA metabolic process	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c18105	"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay"	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c16191	mRNA metabolic process	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c16191	regulation of translation	protein metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c18105	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c16191	vasculogenesis	developmental processes	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c16191	regulation of mRNA stability	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c16191	"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay"	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c16191	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c18105	vasculogenesis	developmental processes	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c18105	gene expression	other metabolic processes	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c18105	mRNA catabolic process	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c18105	T cell differentiation in the thymus	developmental processes	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c18105	regulation of mRNA stability	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c16191	RNA metabolic process	RNA metabolism	P	"Zinc finger protein 36, C3H1 type-like 1 (Butyrate response factor 1) (EGF-response factor 1) (ERF-1) (Protein TIS11B)"
ruditapes_c25948	biological_process	other biological processes	P	UPF0592 protein YDL073W
ruditapes_lrc18600	transport	transport	P	Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D)
ruditapes_lrc18600	translation	protein metabolism	P	Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D)
ruditapes_lrc18600	positive regulation of translational termination	protein metabolism	P	Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D)
ruditapes_lrc18600	positive regulation of translational termination	cell organization and biogenesis	P	Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D)
ruditapes_lrc18600	positive regulation of cell proliferation	cell cycle and proliferation	P	Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D)
ruditapes_lrc18600	protein transport	transport	P	Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D)
ruditapes_lrc18600	translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D)
ruditapes_lrc18600	peptidyl-lysine modification to hypusine	protein metabolism	P	Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D)
ruditapes_lrc18600	translational frameshifting	protein metabolism	P	Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D)
ruditapes_lrc18600	positive regulation of translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D)
ruditapes_lrc18600	mRNA transport	transport	P	Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2) (eIF-4D)
ruditapes_c27722	cell chemotaxis	other biological processes	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	establishment of cell polarity	cell organization and biogenesis	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	protein amino acid autophosphorylation	protein metabolism	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	cell adhesion	cell adhesion	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	cell-substrate adhesion	cell adhesion	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	regulation of JNK cascade	signal transduction	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	positive regulation of synaptogenesis	cell organization and biogenesis	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	positive regulation of synaptogenesis	cell-cell signaling	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	axon guidance	developmental processes	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	axon guidance	cell organization and biogenesis	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	ephrin receptor signaling pathway	signal transduction	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	regulation of ERK1 and ERK2 cascade	signal transduction	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	regulation of JNK cascade	stress response	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	phosphorylation	other metabolic processes	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	nervous system development	developmental processes	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	protein amino acid phosphorylation	protein metabolism	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c27722	positive regulation of synaptogenesis	developmental processes	P	Ephrin type-B receptor 1 (EC 2.7.10.1) (EPH-like kinase 6) (EK6) (cEK6) (Tyrosine-protein kinase receptor EPH-2) (Fragment)
ruditapes_c26409	tRNA processing	RNA metabolism	P	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34) (tRNA [Gm18] methyltransferase) (tRNA methylase 3)
ruditapes_c26409	tRNA methylation	RNA metabolism	P	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34) (tRNA [Gm18] methyltransferase) (tRNA methylase 3)
ruditapes_c26409	RNA processing	RNA metabolism	P	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34) (tRNA [Gm18] methyltransferase) (tRNA methylase 3)
ruditapes_c26409	methylation	other metabolic processes	P	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34) (tRNA [Gm18] methyltransferase) (tRNA methylase 3)
ruditapes_c26409	RNA methylation	RNA metabolism	P	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34) (tRNA [Gm18] methyltransferase) (tRNA methylase 3)
ruditapes_lrc33734	cGMP biosynthetic process	other metabolic processes	P	Guanylate cyclase 32E (EC 4.6.1.2)
ruditapes_lrc33734	cyclic nucleotide biosynthetic process	other metabolic processes	P	Guanylate cyclase 32E (EC 4.6.1.2)
ruditapes_lrc33734	protein amino acid phosphorylation	protein metabolism	P	Guanylate cyclase 32E (EC 4.6.1.2)
ruditapes_c15924	phospholipid biosynthetic process	other metabolic processes	P	Cardiolipin synthase (CLS) (EC 2.7.8.-)
ruditapes_c15924	mitochondrial membrane organization	cell organization and biogenesis	P	Cardiolipin synthase (CLS) (EC 2.7.8.-)
ruditapes_c15924	cellular ion homeostasis	other biological processes	P	Cardiolipin synthase (CLS) (EC 2.7.8.-)
ruditapes_c15924	lipid biosynthetic process	other metabolic processes	P	Cardiolipin synthase (CLS) (EC 2.7.8.-)
ruditapes_c5392	transport	transport	P	Movement protein TGBp3 (9.7 kDa protein) (Triple gene block 3 protein) (TGBp3)
ruditapes_c5392	"spread of virus within host, cell to cell"	other biological processes	P	Movement protein TGBp3 (9.7 kDa protein) (Triple gene block 3 protein) (TGBp3)
ruditapes_c22826	D-amino acid catabolic process	other metabolic processes	P	D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)
ruditapes_c18556	translation	protein metabolism	P	60S ribosomal protein L23a (L25)
ruditapes_c27943	oxidation reduction	other metabolic processes	P	Sorbitol dehydrogenase 2 (EC 1.1.1.14) (L-iditol 2-dehydrogenase 2)
ruditapes_c4199	ascospore formation	other biological processes	P	Sporulation-specific protein 75
ruditapes_c4199	sporulation resulting in formation of a cellular spore	other biological processes	P	Sporulation-specific protein 75
ruditapes_c4199	ascospore wall assembly	cell organization and biogenesis	P	Sporulation-specific protein 75
ruditapes_c18880	biological_process	other biological processes	P	Uncharacterized protein YLL007C
ruditapes_c25303	spermatogenesis	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	positive regulation of pigmentation during development	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	homeostasis of number of cells	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	response to ionizing radiation	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	nuclear fragmentation during apoptosis	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c25303	nuclear fragmentation during apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	vagina development	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	response to axon injury	stress response	P	Apoptosis regulator BAX
ruditapes_c25303	protein homooligomerization	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c25303	regulation of mitochondrial membrane potential	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	B cell homeostasis	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	fertilization	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	activation of caspase activity	death	P	Apoptosis regulator BAX
ruditapes_c25303	regulation of neuron apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	odontogenesis of dentine-containing tooth	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	negative regulation of cell proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c25303	germ cell development	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	regulation of mammary gland epithelial cell proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c25303	regulation of mammary gland epithelial cell proliferation	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	positive regulation of apoptosis involved in mammary gland involution	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	positive regulation of apoptosis involved in mammary gland involution	death	P	Apoptosis regulator BAX
ruditapes_c25303	neuron apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	negative regulation of peptidyl-serine phosphorylation	protein metabolism	P	Apoptosis regulator BAX
ruditapes_c25303	response to wounding	stress response	P	Apoptosis regulator BAX
ruditapes_c25303	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Apoptosis regulator BAX
ruditapes_c25303	cerebral cortex development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	ovarian follicle development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	myeloid cell homeostasis	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	homeostasis of number of cells within a tissue	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	induction of apoptosis by extracellular signals	death	P	Apoptosis regulator BAX
ruditapes_c25303	response to acid	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	induction of apoptosis in response to chemical stimulus	death	P	Apoptosis regulator BAX
ruditapes_c25303	positive regulation of neuron apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	germ cell programmed cell death	death	P	Apoptosis regulator BAX
ruditapes_c25303	protein insertion into mitochondrial membrane during induction of apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c25303	sex differentiation	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	cell proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c25303	leukocyte homeostasis	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	blood vessel remodeling	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	negative regulation of anti-apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	regulation of apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	male gonad development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	nervous system development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	reduction of endoplasmic reticulum calcium ion concentration	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	protein insertion into mitochondrial membrane during induction of apoptosis	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c25303	regulation of caspase activity	death	P	Apoptosis regulator BAX
ruditapes_c25303	regulation of nitrogen utilization	other metabolic processes	P	Apoptosis regulator BAX
ruditapes_c25303	regulation of cell cycle	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c25303	response to DNA damage stimulus	stress response	P	Apoptosis regulator BAX
ruditapes_c25303	retinal cell programmed cell death	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	retinal cell programmed cell death	death	P	Apoptosis regulator BAX
ruditapes_c25303	activation of caspase activity by cytochrome c	death	P	Apoptosis regulator BAX
ruditapes_c25303	positive regulation of apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	limb morphogenesis	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	spermatid differentiation	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	positive regulation of B cell apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	hypothalamus development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	T cell homeostatic proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c25303	apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	apoptotic mitochondrial changes	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c25303	apoptotic mitochondrial changes	death	P	Apoptosis regulator BAX
ruditapes_c25303	apoptosis in response to endoplasmic reticulum stress	death	P	Apoptosis regulator BAX
ruditapes_c25303	development of secondary sexual characteristics	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	negative regulation of neuron apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	post-embryonic development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	B cell homeostatic proliferation	cell cycle and proliferation	P	Apoptosis regulator BAX
ruditapes_c25303	kidney development	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	induction of apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	retina development in camera-type eye	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	glycosphingolipid metabolic process	other metabolic processes	P	Apoptosis regulator BAX
ruditapes_c25303	B cell negative selection	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	induction of apoptosis by intracellular signals	death	P	Apoptosis regulator BAX
ruditapes_c25303	response to toxin	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	B cell apoptosis	death	P	Apoptosis regulator BAX
ruditapes_c25303	response to gamma radiation	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	cellular response to UV	other biological processes	P	Apoptosis regulator BAX
ruditapes_c25303	neuron migration	developmental processes	P	Apoptosis regulator BAX
ruditapes_c25303	positive regulation of calcium ion transport into cytosol	transport	P	Apoptosis regulator BAX
ruditapes_c25303	release of cytochrome c from mitochondria	cell organization and biogenesis	P	Apoptosis regulator BAX
ruditapes_c25303	release of cytochrome c from mitochondria	death	P	Apoptosis regulator BAX
ruditapes_c25303	post-embryonic camera-type eye morphogenesis	developmental processes	P	Apoptosis regulator BAX
ruditapes_c11526	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c11526	"transcription, DNA-dependent"	RNA metabolism	P	Protein E6
ruditapes_c12905	ascospore formation	other biological processes	P	Vacuolar protein sorting-associated protein 13 (Suppression of the onset of impotence protein 1) (Vacuolar protein-targeting protein 2)
ruditapes_c12905	protein transport	transport	P	Vacuolar protein sorting-associated protein 13 (Suppression of the onset of impotence protein 1) (Vacuolar protein-targeting protein 2)
ruditapes_c12905	transport	transport	P	Vacuolar protein sorting-associated protein 13 (Suppression of the onset of impotence protein 1) (Vacuolar protein-targeting protein 2)
ruditapes_c12905	protein retention in Golgi apparatus	other biological processes	P	Vacuolar protein sorting-associated protein 13 (Suppression of the onset of impotence protein 1) (Vacuolar protein-targeting protein 2)
ruditapes_c12905	late endosome to vacuole transport	transport	P	Vacuolar protein sorting-associated protein 13 (Suppression of the onset of impotence protein 1) (Vacuolar protein-targeting protein 2)
ruditapes_c12905	vacuolar protein catabolic process	protein metabolism	P	Vacuolar protein sorting-associated protein 13 (Suppression of the onset of impotence protein 1) (Vacuolar protein-targeting protein 2)
ruditapes_c12905	protein localization	other biological processes	P	Vacuolar protein sorting-associated protein 13 (Suppression of the onset of impotence protein 1) (Vacuolar protein-targeting protein 2)
ruditapes_c27134	RNA splicing	RNA metabolism	P	Pre-mRNA leakage protein 1
ruditapes_c27134	maintenance of RNA location	other biological processes	P	Pre-mRNA leakage protein 1
ruditapes_c27134	mRNA export from nucleus	transport	P	Pre-mRNA leakage protein 1
ruditapes_c27134	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Pre-mRNA leakage protein 1
ruditapes_c27134	mRNA processing	RNA metabolism	P	Pre-mRNA leakage protein 1
ruditapes_s38318	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase UBR2 (EC 6.3.2.-) (Ubiquitin-protein ligase E3 component N-recognin-1 homolog)
ruditapes_s38318	protein monoubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase UBR2 (EC 6.3.2.-) (Ubiquitin-protein ligase E3 component N-recognin-1 homolog)
ruditapes_c22859	chloride transport	transport	P	Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 3.6.3.49) (cAMP-dependent chloride channel)
ruditapes_c22859	ATP catabolic process	other metabolic processes	P	Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 3.6.3.49) (cAMP-dependent chloride channel)
ruditapes_c22859	transport	transport	P	Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 3.6.3.49) (cAMP-dependent chloride channel)
ruditapes_c22859	ion transport	transport	P	Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 3.6.3.49) (cAMP-dependent chloride channel)
ruditapes_c22859	transmembrane transport	transport	P	Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 3.6.3.49) (cAMP-dependent chloride channel)
ruditapes_c6049	multicellular organismal development	developmental processes	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c6049	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c6049	phosphorylation	other metabolic processes	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c6049	protein amino acid phosphorylation	protein metabolism	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c9512	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c9512	multicellular organismal development	developmental processes	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c9512	protein amino acid phosphorylation	protein metabolism	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c9512	phosphorylation	other metabolic processes	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_lrc37804	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc36326	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes2_lrc3313	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_c1749	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes2_lrc5159	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes2_lrc3307	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_c315	phosphorylation	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c315	terpenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c315	isoprenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c12965	protein modification process	protein metabolism	P	Probable hydrogenase nickel incorporation protein HypA
ruditapes_c10181	tRNA processing	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c10181	tRNA modification	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c10181	GTP catabolic process	other metabolic processes	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes2_c4870	oxidation reduction	other metabolic processes	P	Putative reductase Sfri
ruditapes_c39373	cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_s37581	cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes2_lrc3076	biological_process	other biological processes	P	Uncharacterized protein IRC10 (Increased recombination centers protein 10)
ruditapes_c27004	"transcription, DNA-dependent"	RNA metabolism	P	Sporulation minus regulator 2
ruditapes_c27004	single fertilization	other biological processes	P	Sporulation minus regulator 2
ruditapes_c6464	biological_process	other biological processes	P	Putative uncharacterized protein YOL024W
ruditapes_c30997	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c30997	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c30997	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c30997	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c30997	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c22678	phospholipid biosynthetic process	other metabolic processes	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c22678	phosphorylation	other metabolic processes	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c22678	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c22678	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c11581	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PSK2 (EC 2.7.11.1) (PAS kinase 2)
ruditapes_c11581	regulation of translation	protein metabolism	P	Serine/threonine-protein kinase PSK2 (EC 2.7.11.1) (PAS kinase 2)
ruditapes_c11581	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PSK2 (EC 2.7.11.1) (PAS kinase 2)
ruditapes_c11581	signal transduction	signal transduction	P	Serine/threonine-protein kinase PSK2 (EC 2.7.11.1) (PAS kinase 2)
ruditapes_c11581	negative regulation of glycogen biosynthetic process	other metabolic processes	P	Serine/threonine-protein kinase PSK2 (EC 2.7.11.1) (PAS kinase 2)
ruditapes_c4113	response to stress	stress response	P	Dehydration-responsive protein RD22
ruditapes_c4113	response to salt stress	stress response	P	Dehydration-responsive protein RD22
ruditapes2_c884	negative regulation of lipid storage	other biological processes	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	response to lipopolysaccharide	other biological processes	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	nucleotide-binding oligomerization domain containing 2 signaling pathway	signal transduction	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	response to exogenous dsRNA	other biological processes	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	toll-like receptor 4 signaling pathway	signal transduction	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	toll-like receptor 4 signaling pathway	stress response	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	positive regulation of cholesterol efflux	transport	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	nucleotide-binding oligomerization domain containing 1 signaling pathway	signal transduction	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	nucleotide-binding oligomerization domain containing 1 signaling pathway	stress response	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	cytoplasmic sequestering of NF-kappaB	signal transduction	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	cytoplasmic sequestering of NF-kappaB	transport	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	cytoplasmic sequestering of transcription factor	transport	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	negative regulation of Notch signaling pathway	signal transduction	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	lipopolysaccharide-mediated signaling pathway	signal transduction	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	regulation of cell proliferation	cell cycle and proliferation	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	response to muramyl dipeptide	other biological processes	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	negative regulation of foam cell differentiation	developmental processes	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	nucleotide-binding oligomerization domain containing 2 signaling pathway	stress response	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	"protein import into nucleus, translocation"	transport	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	negative regulation of myeloid cell differentiation	developmental processes	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes2_c884	positive regulation of cellular protein metabolic process	protein metabolism	P	NF-kappa-B inhibitor alpha (ECI-6) (I-kappa-B-alpha) (IkB-alpha) (IkappaBalpha)
ruditapes_c28766	translation	protein metabolism	P	"30S ribosomal protein S3, chloroplastic (ORF 712)"
ruditapes_c29552	lipopolysaccharide biosynthetic process	other metabolic processes	P	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase)
ruditapes_c18934	"phagocytosis, engulfment"	transport	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes_c18934	"phagocytosis, engulfment"	cell organization and biogenesis	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes_c18934	cell adhesion	cell adhesion	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes_c18934	positive regulation of cell proliferation	cell cycle and proliferation	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes_c18934	single fertilization	other biological processes	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes_c18934	response to estrogen stimulus	other biological processes	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes_c18934	"phagocytosis, recognition"	transport	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes_c18934	"phagocytosis, recognition"	cell organization and biogenesis	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes_c18934	angiogenesis	developmental processes	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes_c18934	interspecies interaction between organisms	other biological processes	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes_c18934	positive regulation of phagocytosis	transport	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes_c18934	positive regulation of phagocytosis	cell organization and biogenesis	P	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]
ruditapes2_c1000	biological_process	other biological processes	P	Putative lipase YOR059C (EC 3.1.-.-)
ruditapes2_c1000	lipid catabolic process	other metabolic processes	P	Putative lipase YOR059C (EC 3.1.-.-)
ruditapes2_c1000	lipid metabolic process	other metabolic processes	P	Putative lipase YOR059C (EC 3.1.-.-)
ruditapes2_c2439	cell cycle	cell cycle and proliferation	P	Protein lethal(2) giant larvae (p127)
ruditapes2_c2439	exocytosis	transport	P	Protein lethal(2) giant larvae (p127)
ruditapes2_c2294	regulation of Rab GTPase activity	signal transduction	P	GTPase-activating protein GYP1 (GAP for YPT1)
ruditapes2_c2294	positive regulation of GTPase activity	other biological processes	P	GTPase-activating protein GYP1 (GAP for YPT1)
ruditapes2_c2294	positive regulation of Rab GTPase activity	signal transduction	P	GTPase-activating protein GYP1 (GAP for YPT1)
ruditapes2_c2294	vesicle-mediated transport	transport	P	GTPase-activating protein GYP1 (GAP for YPT1)
ruditapes_c11330	nicotinamide riboside transport	transport	P	Nicotinamide riboside transporter 1 (Thiamine transport protein 71)
ruditapes_c11330	thiamin transport	transport	P	Nicotinamide riboside transporter 1 (Thiamine transport protein 71)
ruditapes_c11330	transport	transport	P	Nicotinamide riboside transporter 1 (Thiamine transport protein 71)
ruditapes_c11330	nucleobase transport	transport	P	Nicotinamide riboside transporter 1 (Thiamine transport protein 71)
ruditapes_c22339	negative regulation of insulin secretion	transport	P	"cAMP-specific 3',5'-cyclic phosphodiesterase 4C (EC 3.1.4.17) (DPDE1) (PDE21)"
ruditapes_c22339	negative regulation of insulin secretion	cell-cell signaling	P	"cAMP-specific 3',5'-cyclic phosphodiesterase 4C (EC 3.1.4.17) (DPDE1) (PDE21)"
ruditapes_c22339	cAMP catabolic process	other metabolic processes	P	"cAMP-specific 3',5'-cyclic phosphodiesterase 4C (EC 3.1.4.17) (DPDE1) (PDE21)"
ruditapes_c22339	signal transduction	signal transduction	P	"cAMP-specific 3',5'-cyclic phosphodiesterase 4C (EC 3.1.4.17) (DPDE1) (PDE21)"
ruditapes_c13078	cell cycle	cell cycle and proliferation	P	Protein DIA2 (Digs into agar protein 2)
ruditapes_c13078	invasive growth in response to glucose limitation	other biological processes	P	Protein DIA2 (Digs into agar protein 2)
ruditapes_c13078	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Protein DIA2 (Digs into agar protein 2)
ruditapes_c13078	regulation of DNA replication	DNA metabolism	P	Protein DIA2 (Digs into agar protein 2)
ruditapes_c13078	protein ubiquitination	protein metabolism	P	Protein DIA2 (Digs into agar protein 2)
ruditapes_c25412	"termination of RNA polymerase II transcription, poly(A)-independent"	RNA metabolism	P	Protein SYC1
ruditapes_c25412	"termination of RNA polymerase II transcription, poly(A)-independent"	cell organization and biogenesis	P	Protein SYC1
ruditapes_c25412	mRNA processing	RNA metabolism	P	Protein SYC1
ruditapes_c25412	"termination of RNA polymerase II transcription, poly(A)-coupled"	RNA metabolism	P	Protein SYC1
ruditapes_c25412	"termination of RNA polymerase II transcription, poly(A)-coupled"	cell organization and biogenesis	P	Protein SYC1
ruditapes_c38311	"transcription, DNA-dependent"	RNA metabolism	P	Interferon-activable protein 205-B (Ifi-205-B) (Interferon-inducible protein p205-B) (Myeloid cell nuclear differentiation antigen) (Protein D3)
ruditapes_c38311	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Interferon-activable protein 205-B (Ifi-205-B) (Interferon-inducible protein p205-B) (Myeloid cell nuclear differentiation antigen) (Protein D3)
ruditapes_c34484	"transcription, DNA-dependent"	RNA metabolism	P	Interferon-activable protein 205-B (Ifi-205-B) (Interferon-inducible protein p205-B) (Myeloid cell nuclear differentiation antigen) (Protein D3)
ruditapes_c34484	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Interferon-activable protein 205-B (Ifi-205-B) (Interferon-inducible protein p205-B) (Myeloid cell nuclear differentiation antigen) (Protein D3)
ruditapes_lrc27697	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (Fragment)
ruditapes_lrc27697	microtubule-based process	other biological processes	P	Tubulin alpha chain (Fragment)
ruditapes_lrc27697	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (Fragment)
ruditapes_c2587	regulation of cell growth	other biological processes	P	Testican-1 (Protein SPOCK)
ruditapes_c2587	negative regulation of cell-substrate adhesion	cell adhesion	P	Testican-1 (Protein SPOCK)
ruditapes_c2587	nervous system development	developmental processes	P	Testican-1 (Protein SPOCK)
ruditapes_c2587	negative regulation of neuron projection development	developmental processes	P	Testican-1 (Protein SPOCK)
ruditapes_c2587	negative regulation of neuron projection development	cell organization and biogenesis	P	Testican-1 (Protein SPOCK)
ruditapes_c2587	cell adhesion	cell adhesion	P	Testican-1 (Protein SPOCK)
ruditapes_c2587	neuron migration	developmental processes	P	Testican-1 (Protein SPOCK)
ruditapes_c2587	negative regulation of endopeptidase activity	other biological processes	P	Testican-1 (Protein SPOCK)
ruditapes_c2587	central nervous system neuron differentiation	developmental processes	P	Testican-1 (Protein SPOCK)
ruditapes_c2587	neurogenesis	developmental processes	P	Testican-1 (Protein SPOCK)
ruditapes_c2587	signal transduction	signal transduction	P	Testican-1 (Protein SPOCK)
ruditapes2_c1623	pathogenesis	other biological processes	P	Avirulence protein AvrRxv
ruditapes_c24154	tRNA wobble uridine modification	RNA metabolism	P	Thiosulfate sulfurtransferase TUM1 (EC 2.8.1.1) (Thiouridine modification protein 1)
ruditapes_c24154	wobble position uridine thiolation	RNA metabolism	P	Thiosulfate sulfurtransferase TUM1 (EC 2.8.1.1) (Thiouridine modification protein 1)
ruditapes_c9406	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor CTCF (11-zinc finger protein) (CCCTC-binding factor) (CTCFL paralog)
ruditapes_c9406	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor CTCF (11-zinc finger protein) (CCCTC-binding factor) (CTCFL paralog)
ruditapes2_lrc5115	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase HRK1 (EC 2.7.11.1) (Hygromycin resistance kinase 1)
ruditapes2_lrc5115	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase HRK1 (EC 2.7.11.1) (Hygromycin resistance kinase 1)
ruditapes2_lrc5115	cellular ion homeostasis	other biological processes	P	Serine/threonine-protein kinase HRK1 (EC 2.7.11.1) (Hygromycin resistance kinase 1)
ruditapes_c13796	signal transduction	signal transduction	P	Fibrinogen-like protein 1 (HP-041) (Hepassocin) (Hepatocyte-derived fibrinogen-related protein 1) (HFREP-1) (Liver fibrinogen-related protein 1) (LFIRE-1)
ruditapes_c23762	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein suppressor of hairy wing
ruditapes_c23762	"transcription, DNA-dependent"	RNA metabolism	P	Protein suppressor of hairy wing
ruditapes_c11827	metabolic process	other metabolic processes	P	Iduronate 2-sulfatase (EC 3.1.6.13) (Alpha-L-iduronate sulfate sulfatase)
ruditapes_c19347	oxidation reduction	other metabolic processes	P	Ferric reductase transmembrane component 5 (EC 1.16.1.-) (Ferric-chelate reductase 5)
ruditapes_c19347	transport	transport	P	Ferric reductase transmembrane component 5 (EC 1.16.1.-) (Ferric-chelate reductase 5)
ruditapes_c19347	biological_process	other biological processes	P	Ferric reductase transmembrane component 5 (EC 1.16.1.-) (Ferric-chelate reductase 5)
ruditapes_c19347	ion transport	transport	P	Ferric reductase transmembrane component 5 (EC 1.16.1.-) (Ferric-chelate reductase 5)
ruditapes_c19347	electron transport chain	other metabolic processes	P	Ferric reductase transmembrane component 5 (EC 1.16.1.-) (Ferric-chelate reductase 5)
ruditapes_lrc25257	biological_process	other biological processes	P	Uncharacterized protein YPL272C
ruditapes_lrc25257	cellular alcohol metabolic process	other metabolic processes	P	Uncharacterized protein YPL272C
ruditapes_c7567	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Myb-related transcription factor, partner of profilin (Myb-related protein p42POP)"
ruditapes_c7567	"transcription, DNA-dependent"	RNA metabolism	P	"Myb-related transcription factor, partner of profilin (Myb-related protein p42POP)"
ruditapes_c9222	biological_process	other biological processes	P	Mitochondrial fission regulator 2
ruditapes_c25890	methylation	other metabolic processes	P	tRNA methyltransferase 10 homolog B (EC 2.1.1.-) (RNA (guanine-9-)-methyltransferase domain-containing protein 3)
ruditapes2_c2609	tRNA processing	RNA metabolism	P	tRNA wybutosine-synthesizing protein 1 homolog (Radical S-adenosyl methionine and flavodoxin domain-containing protein 1) (tRNA-yW-synthesizing protein)
ruditapes2_c2609	oxidation reduction	other metabolic processes	P	tRNA wybutosine-synthesizing protein 1 homolog (Radical S-adenosyl methionine and flavodoxin domain-containing protein 1) (tRNA-yW-synthesizing protein)
ruditapes_c30334	biological_process	other biological processes	P	Vertnin
ruditapes_c21303	catecholamine metabolic process	other metabolic processes	P	DBH-like monooxygenase protein 2 homolog (EC 1.14.17.-)
ruditapes_c21303	oxidation reduction	other metabolic processes	P	DBH-like monooxygenase protein 2 homolog (EC 1.14.17.-)
ruditapes2_c4657	phosphatidylserine biosynthetic process	other metabolic processes	P	Phosphatidylserine synthase 2 (PSS-2) (PtdSer synthase 2) (EC 2.7.8.29) (Serine-exchange enzyme II)
ruditapes_c16699	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase SETD1B (EC 2.1.1.43) (SET domain-containing protein 1B)
ruditapes_c16699	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SETD1B (EC 2.1.1.43) (SET domain-containing protein 1B)
ruditapes_c16699	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SETD1B (EC 2.1.1.43) (SET domain-containing protein 1B)
ruditapes_c16699	"transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase SETD1B (EC 2.1.1.43) (SET domain-containing protein 1B)
ruditapes_c16699	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase SETD1B (EC 2.1.1.43) (SET domain-containing protein 1B)
ruditapes_c16699	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase SETD1B (EC 2.1.1.43) (SET domain-containing protein 1B)
ruditapes_c9500	cell communication	other biological processes	P	PX domain-containing protein 1
ruditapes_c588	intracellular protein transport	transport	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c588	response to biotic stimulus	other biological processes	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c588	positive regulation of synaptogenesis	developmental processes	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c588	positive regulation of synaptogenesis	cell organization and biogenesis	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_c588	positive regulation of synaptogenesis	cell-cell signaling	P	Synapse differentiation-inducing gene protein 1 (SynDIG1) (Dispanin subfamily C member 2) (DSPC2) (Transmembrane protein 90B)
ruditapes_s39744	heart development	developmental processes	P	Protein odd-skipped-related 1
ruditapes_s39744	stem cell differentiation	other biological processes	P	Protein odd-skipped-related 1
ruditapes_s39744	pronephros development	developmental processes	P	Protein odd-skipped-related 1
ruditapes_s39744	positive regulation of epithelial cell proliferation	cell cycle and proliferation	P	Protein odd-skipped-related 1
ruditapes_s39744	"transcription, DNA-dependent"	RNA metabolism	P	Protein odd-skipped-related 1
ruditapes_s39744	urogenital system development	developmental processes	P	Protein odd-skipped-related 1
ruditapes_s39744	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein odd-skipped-related 1
ruditapes_c14563	metabolic process	other metabolic processes	P	S-formylglutathione hydrolase (FGH) (EC 3.1.2.12) (Esterase D)
ruditapes2_c473	biological_process	other biological processes	P	PLAC8-like protein 1
ruditapes2_c6866	biological_process	other biological processes	P	PLAC8-like protein 1
ruditapes_c36195	biological_process	other biological processes	P	PLAC8-like protein 1
ruditapes2_c5132	biological_process	other biological processes	P	PLAC8-like protein 1
ruditapes_c3388	cell-matrix adhesion	cell adhesion	P	Integrin beta-2 (Fragment)
ruditapes_c3388	cell adhesion	cell adhesion	P	Integrin beta-2 (Fragment)
ruditapes_c3388	integrin-mediated signaling pathway	signal transduction	P	Integrin beta-2 (Fragment)
ruditapes_c17863	homologous chromosome segregation	cell cycle and proliferation	P	Meiotic recombination protein rec15
ruditapes_c17863	chromosome segregation	other biological processes	P	Meiotic recombination protein rec15
ruditapes_c17863	meiosis	cell cycle and proliferation	P	Meiotic recombination protein rec15
ruditapes_c17863	reciprocal meiotic recombination	DNA metabolism	P	Meiotic recombination protein rec15
ruditapes_c17863	reciprocal meiotic recombination	cell cycle and proliferation	P	Meiotic recombination protein rec15
ruditapes_c17734	GTP catabolic process	other metabolic processes	P	Eukaryotic translation initiation factor 2 subunit gamma (eIF-2-gamma)
ruditapes_c17734	translation	protein metabolism	P	Eukaryotic translation initiation factor 2 subunit gamma (eIF-2-gamma)
ruditapes_c17734	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 2 subunit gamma (eIF-2-gamma)
ruditapes_s37033	prepulse inhibition	other biological processes	P	"Fatty acid-binding protein, brain (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes_s37033	startle response	other biological processes	P	"Fatty acid-binding protein, brain (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes_s37033	cell proliferation in forebrain	cell cycle and proliferation	P	"Fatty acid-binding protein, brain (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes_s37033	cell proliferation in forebrain	developmental processes	P	"Fatty acid-binding protein, brain (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes_s37033	neurogenesis	developmental processes	P	"Fatty acid-binding protein, brain (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes_s37033	transport	transport	P	"Fatty acid-binding protein, brain (Brain-type fatty acid-binding protein) (B-FABP) (Fatty acid-binding protein 7)"
ruditapes_c29279	regulation of TOR signaling pathway	signal transduction	P	High affinity cationic amino acid transporter 1 (CAT-1) (CAT1) (Ecotropic retroviral leukemia receptor) (Ecotropic retrovirus receptor) (ERR) (Solute carrier family 7 member 1) (System Y+ basic amino acid transporter)
ruditapes_c29279	arginine transport	transport	P	High affinity cationic amino acid transporter 1 (CAT-1) (CAT1) (Ecotropic retroviral leukemia receptor) (Ecotropic retrovirus receptor) (ERR) (Solute carrier family 7 member 1) (System Y+ basic amino acid transporter)
ruditapes_c29279	amino acid transport	transport	P	High affinity cationic amino acid transporter 1 (CAT-1) (CAT1) (Ecotropic retroviral leukemia receptor) (Ecotropic retrovirus receptor) (ERR) (Solute carrier family 7 member 1) (System Y+ basic amino acid transporter)
ruditapes_c29279	transport	transport	P	High affinity cationic amino acid transporter 1 (CAT-1) (CAT1) (Ecotropic retroviral leukemia receptor) (Ecotropic retrovirus receptor) (ERR) (Solute carrier family 7 member 1) (System Y+ basic amino acid transporter)
ruditapes_c6128	cholesterol biosynthetic process	other metabolic processes	P	"Farnesyl pyrophosphate synthase 1, mitochondrial (FPP synthase 1) (FPS 1) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase 1) (Dimethylallyltranstransferase 1) (EC 2.5.1.1) (Farnesyl diphosphate synthase 1) (Geranyltranstransferase 1)"
ruditapes_c6128	steroid biosynthetic process	other metabolic processes	P	"Farnesyl pyrophosphate synthase 1, mitochondrial (FPP synthase 1) (FPS 1) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase 1) (Dimethylallyltranstransferase 1) (EC 2.5.1.1) (Farnesyl diphosphate synthase 1) (Geranyltranstransferase 1)"
ruditapes_c6128	lipid biosynthetic process	other metabolic processes	P	"Farnesyl pyrophosphate synthase 1, mitochondrial (FPP synthase 1) (FPS 1) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase 1) (Dimethylallyltranstransferase 1) (EC 2.5.1.1) (Farnesyl diphosphate synthase 1) (Geranyltranstransferase 1)"
ruditapes_c6128	isoprenoid biosynthetic process	other metabolic processes	P	"Farnesyl pyrophosphate synthase 1, mitochondrial (FPP synthase 1) (FPS 1) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase 1) (Dimethylallyltranstransferase 1) (EC 2.5.1.1) (Farnesyl diphosphate synthase 1) (Geranyltranstransferase 1)"
ruditapes_c6128	sterol biosynthetic process	other metabolic processes	P	"Farnesyl pyrophosphate synthase 1, mitochondrial (FPP synthase 1) (FPS 1) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase 1) (Dimethylallyltranstransferase 1) (EC 2.5.1.1) (Farnesyl diphosphate synthase 1) (Geranyltranstransferase 1)"
ruditapes_c16672	metabolic process	other metabolic processes	P	Mesocentin
ruditapes_c16672	cell adhesion	cell adhesion	P	Mesocentin
ruditapes_c16672	inductive cell migration	other biological processes	P	Mesocentin
ruditapes_c16672	gonad development	developmental processes	P	Mesocentin
ruditapes_c16672	intracellular protein transport	transport	P	Mesocentin
ruditapes_c16672	axonal fasciculation	developmental processes	P	Mesocentin
ruditapes_c16672	axonal fasciculation	cell organization and biogenesis	P	Mesocentin
ruditapes_c16672	nervous system development	developmental processes	P	Mesocentin
ruditapes_c16672	hermaphrodite genitalia development	developmental processes	P	Mesocentin
ruditapes_c16672	multicellular organismal development	developmental processes	P	Mesocentin
ruditapes_c25199	endoplasmic reticulum unfolded protein response	signal transduction	P	Protein phosphatase 2C homolog 2 (PP2C-2) (EC 3.1.3.16)
ruditapes_c25199	endoplasmic reticulum unfolded protein response	stress response	P	Protein phosphatase 2C homolog 2 (PP2C-2) (EC 3.1.3.16)
ruditapes_c25199	inactivation of MAPK activity involved in osmosensory signaling pathway	other metabolic processes	P	Protein phosphatase 2C homolog 2 (PP2C-2) (EC 3.1.3.16)
ruditapes_c25199	inactivation of MAPK activity involved in osmosensory signaling pathway	signal transduction	P	Protein phosphatase 2C homolog 2 (PP2C-2) (EC 3.1.3.16)
ruditapes_c25199	inactivation of MAPK activity involved in osmosensory signaling pathway	stress response	P	Protein phosphatase 2C homolog 2 (PP2C-2) (EC 3.1.3.16)
ruditapes_c25199	protein amino acid dephosphorylation	protein metabolism	P	Protein phosphatase 2C homolog 2 (PP2C-2) (EC 3.1.3.16)
ruditapes_c21022	embryonic development ending in birth or egg hatching	developmental processes	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c25931	body morphogenesis	other biological processes	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c21022	transport	transport	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c25931	embryonic development ending in birth or egg hatching	developmental processes	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c25931	receptor-mediated endocytosis	transport	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c21022	positive regulation of locomotion	other biological processes	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c25931	receptor-mediated endocytosis	cell organization and biogenesis	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c21022	receptor-mediated endocytosis	transport	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c21022	receptor-mediated endocytosis	cell organization and biogenesis	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c25931	transport	transport	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c21022	body morphogenesis	other biological processes	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c25931	positive regulation of locomotion	other biological processes	P	Nose resistant to fluoxetine protein 6 (Protein nrf-6)
ruditapes_c28010	ER-associated protein catabolic process	protein metabolism	P	RING finger protein 121
ruditapes_c28010	endoplasmic reticulum unfolded protein response	signal transduction	P	RING finger protein 121
ruditapes_c28010	endoplasmic reticulum unfolded protein response	stress response	P	RING finger protein 121
ruditapes_c28010	protein ubiquitination	protein metabolism	P	RING finger protein 121
ruditapes_c16525	cell differentiation	other biological processes	P	Degenerin-like protein unc-105 (Uncoordinated protein 105)
ruditapes_c16525	ion transport	transport	P	Degenerin-like protein unc-105 (Uncoordinated protein 105)
ruditapes_c16525	magnesium ion transport	transport	P	Degenerin-like protein unc-105 (Uncoordinated protein 105)
ruditapes_c16525	sodium ion transport	transport	P	Degenerin-like protein unc-105 (Uncoordinated protein 105)
ruditapes_c16525	transport	transport	P	Degenerin-like protein unc-105 (Uncoordinated protein 105)
ruditapes_c16525	muscle organ development	developmental processes	P	Degenerin-like protein unc-105 (Uncoordinated protein 105)
ruditapes_c16525	calcium ion transport	transport	P	Degenerin-like protein unc-105 (Uncoordinated protein 105)
ruditapes_c16525	multicellular organismal development	developmental processes	P	Degenerin-like protein unc-105 (Uncoordinated protein 105)
ruditapes_c19479	biopolymer modification	other metabolic processes	P	CDK5RAP1-like protein
ruditapes_c19479	RNA modification	RNA metabolism	P	CDK5RAP1-like protein
ruditapes_c19479	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	CDK5RAP1-like protein
ruditapes_c19479	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	CDK5RAP1-like protein
ruditapes_c25628	embryonic development ending in birth or egg hatching	developmental processes	P	Uncharacterized protein T09B9.4
ruditapes_c20403	response to pH	other biological processes	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	transmembrane transport	transport	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	response to lipopolysaccharide	other biological processes	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	potassium ion transport	transport	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	synaptic transmission	cell-cell signaling	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	regulation of insulin secretion	transport	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	response to chemical stimulus	other biological processes	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	response to zinc ion	other biological processes	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	positive regulation of potassium ion transport	transport	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	energy reserve metabolic process	other metabolic processes	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	carbohydrate metabolic process	other metabolic processes	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	regulation of insulin secretion	cell-cell signaling	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	response to insulin stimulus	other biological processes	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	response to drug	other biological processes	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	negative regulation of insulin secretion	transport	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	negative regulation of insulin secretion	cell-cell signaling	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c20403	transport	transport	P	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)
ruditapes_c18671	phosphorylation	other metabolic processes	P	G protein-coupled receptor kinase 1 (EC 2.7.11.16)
ruditapes_c18671	protein amino acid phosphorylation	protein metabolism	P	G protein-coupled receptor kinase 1 (EC 2.7.11.16)
ruditapes_c18671	signal transduction	signal transduction	P	G protein-coupled receptor kinase 1 (EC 2.7.11.16)
ruditapes_c17743	dauer entry	developmental processes	P	RFX-like transcription factor daf-19 (Abnormal dauer formation protein 19)
ruditapes_c17743	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	RFX-like transcription factor daf-19 (Abnormal dauer formation protein 19)
ruditapes_c17743	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RFX-like transcription factor daf-19 (Abnormal dauer formation protein 19)
ruditapes_c17743	"transcription, DNA-dependent"	RNA metabolism	P	RFX-like transcription factor daf-19 (Abnormal dauer formation protein 19)
ruditapes2_lrc4412	RNA-dependent DNA replication	DNA metabolism	P	Uncharacterized protein K02A2.6
ruditapes_c25911	DNA integration	DNA metabolism	P	Uncharacterized protein K02A2.6
ruditapes_c21092	DNA integration	DNA metabolism	P	Uncharacterized protein K02A2.6
ruditapes2_lrc4412	DNA integration	DNA metabolism	P	Uncharacterized protein K02A2.6
ruditapes_c18515	DNA integration	DNA metabolism	P	Uncharacterized protein K02A2.6
ruditapes_c21092	RNA-dependent DNA replication	DNA metabolism	P	Uncharacterized protein K02A2.6
ruditapes_c25911	RNA-dependent DNA replication	DNA metabolism	P	Uncharacterized protein K02A2.6
ruditapes_c18515	RNA-dependent DNA replication	DNA metabolism	P	Uncharacterized protein K02A2.6
ruditapes2_lrc4459	determination of adult life span	developmental processes	P	Probable glutathione S-transferase 5 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_lrc4459	apoptosis	death	P	Probable glutathione S-transferase 5 (EC 2.5.1.18) (GST class-sigma)
ruditapes_s37975	metabolic process	other metabolic processes	P	Probable glutathione S-transferase gst-36 (EC 2.5.1.18) (GST class-sigma)
ruditapes_c8293	locomotion	other biological processes	P	Protein patched homolog 1
ruditapes_c8293	receptor-mediated endocytosis	transport	P	Protein patched homolog 1
ruditapes_c8293	receptor-mediated endocytosis	cell organization and biogenesis	P	Protein patched homolog 1
ruditapes_c8293	cell cycle	cell cycle and proliferation	P	Protein patched homolog 1
ruditapes_c8293	oviposition	other biological processes	P	Protein patched homolog 1
ruditapes_c8293	growth	other biological processes	P	Protein patched homolog 1
ruditapes_c8293	cell division	other biological processes	P	Protein patched homolog 1
ruditapes_c8293	mitosis	cell organization and biogenesis	P	Protein patched homolog 1
ruditapes_c8293	"molting cycle, collagen and cuticulin-based cuticle"	other biological processes	P	Protein patched homolog 1
ruditapes_c8293	lipid storage	other biological processes	P	Protein patched homolog 1
ruditapes_c8293	mitosis	cell cycle and proliferation	P	Protein patched homolog 1
ruditapes_c8293	nematode larval development	developmental processes	P	Protein patched homolog 1
ruditapes_c8293	embryonic development ending in birth or egg hatching	developmental processes	P	Protein patched homolog 1
ruditapes2_c2552	protein modification process	protein metabolism	P	Tubulin polyglutamylase ttll-4 (EC 6.-.-.-) (Tubulin--tyrosine ligase-like protein 4)
ruditapes2_c2552	protein polyglutamylation	protein metabolism	P	Tubulin polyglutamylase ttll-4 (EC 6.-.-.-) (Tubulin--tyrosine ligase-like protein 4)
ruditapes_c27406	nervous system development	developmental processes	P	Neuroblast differentiation-associated protein AHNAK (Desmoyokin)
ruditapes_c25781	oxidation reduction	other metabolic processes	P	Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old yellow enzyme homolog 2)
ruditapes_c29623	mitotic sister chromatid cohesion	cell cycle and proliferation	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes_c29623	mitotic sister chromatid cohesion	cell organization and biogenesis	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes_c29623	cell cycle	cell cycle and proliferation	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes_c29623	negative regulation of G0 to G1 transition	cell cycle and proliferation	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes_c29623	sister chromatid cohesion	cell organization and biogenesis	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes_c29623	attachment of spindle microtubules to kinetochore	cell organization and biogenesis	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes_c29623	mitotic spindle organization	cell cycle and proliferation	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes_c29623	mitotic spindle organization	cell organization and biogenesis	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes_c29623	S phase of mitotic cell cycle	cell cycle and proliferation	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes_c29623	positive regulation of maintenance of mitotic sister chromatid cohesion	cell cycle and proliferation	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes_c29623	positive regulation of maintenance of mitotic sister chromatid cohesion	cell organization and biogenesis	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes_c29623	sister chromatid cohesion	cell cycle and proliferation	P	Sister chromatid cohesion protein mis4 (SCC2 homolog)
ruditapes2_c2567	translation	protein metabolism	P	"54S ribosomal protein L23, mitochondrial"
ruditapes2_lrc2758	methionine biosynthetic process	other metabolic processes	P	Uncharacterized FAD-binding protein C12C2.03c
ruditapes2_lrc2758	oxidation reduction	other metabolic processes	P	Uncharacterized FAD-binding protein C12C2.03c
ruditapes_c17528	misfolded or incompletely synthesized protein catabolic process	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c18662	response to hypoxia	stress response	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c17528	cellular response to oxidative stress	stress response	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c18662	cellular response to oxidative stress	stress response	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c18662	protein homooligomerization	cell organization and biogenesis	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c17528	response to hypoxia	stress response	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c18662	mitochondrion organization	cell organization and biogenesis	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c18662	oxidation-dependent protein catabolic process	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c18662	proteolysis	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c18662	misfolded or incompletely synthesized protein catabolic process	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c17528	mitochondrion organization	cell organization and biogenesis	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c17528	oxidation-dependent protein catabolic process	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c17528	proteolysis	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c17528	protein homooligomerization	cell organization and biogenesis	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c21304	extracellular polysaccharide metabolic process	other metabolic processes	P	Alkali-sensitive linkage protein 1
ruditapes_c7698	extracellular polysaccharide metabolic process	other metabolic processes	P	Alkali-sensitive linkage protein 1
ruditapes_c21304	carbohydrate metabolic process	other metabolic processes	P	Alkali-sensitive linkage protein 1
ruditapes_c7698	carbohydrate metabolic process	other metabolic processes	P	Alkali-sensitive linkage protein 1
ruditapes_c26978	"transcription, DNA-dependent"	RNA metabolism	P	Putative general negative regulator of transcription C16C9.04c
ruditapes_c26978	mRNA catabolic process	RNA metabolism	P	Putative general negative regulator of transcription C16C9.04c
ruditapes_c26978	protein ubiquitination	protein metabolism	P	Putative general negative regulator of transcription C16C9.04c
ruditapes_c26978	RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Putative general negative regulator of transcription C16C9.04c
ruditapes_c26978	nuclear-transcribed mRNA poly(A) tail shortening	RNA metabolism	P	Putative general negative regulator of transcription C16C9.04c
ruditapes_c26978	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative general negative regulator of transcription C16C9.04c
ruditapes_c26978	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Putative general negative regulator of transcription C16C9.04c
ruditapes_c22445	regulation of Rab GTPase activity	signal transduction	P	TBC domain-containing protein C23D3.03c
ruditapes_c22445	positive regulation of Rab GTPase activity	signal transduction	P	TBC domain-containing protein C23D3.03c
ruditapes_c2939	transport	transport	P	Nucleoporin nup146 (Nuclear pore protein nup146)
ruditapes_c2939	cell division	other biological processes	P	Nucleoporin nup146 (Nuclear pore protein nup146)
ruditapes_c2939	rRNA export from nucleus	transport	P	Nucleoporin nup146 (Nuclear pore protein nup146)
ruditapes_c2939	nucleocytoplasmic transport	transport	P	Nucleoporin nup146 (Nuclear pore protein nup146)
ruditapes_c2447	ubiquitin-dependent protein catabolic process	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase 5 (EC 3.4.19.12) (Deubiquitinating enzyme 5) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5)
ruditapes_c2447	protein deubiquitination	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase 5 (EC 3.4.19.12) (Deubiquitinating enzyme 5) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5)
ruditapes_c2447	proteolysis	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase 5 (EC 3.4.19.12) (Deubiquitinating enzyme 5) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5)
ruditapes_c2447	endocytosis	transport	P	Probable ubiquitin carboxyl-terminal hydrolase 5 (EC 3.4.19.12) (Deubiquitinating enzyme 5) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5)
ruditapes_c2447	endocytosis	cell organization and biogenesis	P	Probable ubiquitin carboxyl-terminal hydrolase 5 (EC 3.4.19.12) (Deubiquitinating enzyme 5) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5)
ruditapes_c27186	translation	protein metabolism	P	60S ribosomal protein L38-2
ruditapes2_c2048	oligosaccharide catabolic process	other metabolic processes	P	Uncharacterized family 31 glucosidase C30D11.01c (EC 3.2.1.-)
ruditapes2_c2048	carbohydrate metabolic process	other metabolic processes	P	Uncharacterized family 31 glucosidase C30D11.01c (EC 3.2.1.-)
ruditapes2_c2048	cellular polysaccharide catabolic process	other metabolic processes	P	Uncharacterized family 31 glucosidase C30D11.01c (EC 3.2.1.-)
ruditapes2_c2048	metabolic process	other metabolic processes	P	Uncharacterized family 31 glucosidase C30D11.01c (EC 3.2.1.-)
ruditapes2_c2048	extracellular polysaccharide metabolic process	other metabolic processes	P	Uncharacterized family 31 glucosidase C30D11.01c (EC 3.2.1.-)
ruditapes2_c546	translation	protein metabolism	P	Probable translation initiation factor eIF-2B subunit delta (eIF-2B GDP-GTP exchange factor subunit delta)
ruditapes2_c546	cellular metabolic process	other metabolic processes	P	Probable translation initiation factor eIF-2B subunit delta (eIF-2B GDP-GTP exchange factor subunit delta)
ruditapes2_c546	translational initiation	protein metabolism	P	Probable translation initiation factor eIF-2B subunit delta (eIF-2B GDP-GTP exchange factor subunit delta)
ruditapes2_c546	negative regulation of translational initiation	protein metabolism	P	Probable translation initiation factor eIF-2B subunit delta (eIF-2B GDP-GTP exchange factor subunit delta)
ruditapes_c20322	proteolysis	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase K02C4.3 (EC 3.4.19.12) (Deubiquitinating enzyme) (Ubiquitin thioesterase) (Ubiquitin-specific-processing protease)
ruditapes_c20322	ubiquitin-dependent protein catabolic process	protein metabolism	P	Probable ubiquitin carboxyl-terminal hydrolase K02C4.3 (EC 3.4.19.12) (Deubiquitinating enzyme) (Ubiquitin thioesterase) (Ubiquitin-specific-processing protease)
ruditapes_c24706	embryonic development ending in birth or egg hatching	developmental processes	P	Probable rRNA-processing protein EBP2 homolog
ruditapes_c24706	reproduction	other biological processes	P	Probable rRNA-processing protein EBP2 homolog
ruditapes_c24706	growth	other biological processes	P	Probable rRNA-processing protein EBP2 homolog
ruditapes_c24706	hermaphrodite genitalia development	developmental processes	P	Probable rRNA-processing protein EBP2 homolog
ruditapes_c24706	nematode larval development	developmental processes	P	Probable rRNA-processing protein EBP2 homolog
ruditapes_c24706	ribosome biogenesis	other biological processes	P	Probable rRNA-processing protein EBP2 homolog
ruditapes_c24706	receptor-mediated endocytosis	transport	P	Probable rRNA-processing protein EBP2 homolog
ruditapes_c24706	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable rRNA-processing protein EBP2 homolog
ruditapes_c23597	translation	protein metabolism	P	"30S ribosomal protein S3, chloroplastic"
ruditapes_lrc35323	translation	protein metabolism	P	60S ribosomal protein L17
ruditapes_c6617	translation	protein metabolism	P	60S ribosomal protein L17
ruditapes_lrc15185	translation	protein metabolism	P	60S ribosomal protein L17
ruditapes2_c5454	translation	protein metabolism	P	60S ribosomal protein L17
ruditapes2_c6065	translation	protein metabolism	P	60S ribosomal protein L17
ruditapes_lrc33024	translation	protein metabolism	P	60S ribosomal protein L17
ruditapes_c11500	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_c21321	protein processing	protein metabolism	P	Retroviral-like aspartic protease 1 (EC 3.4.23.-) (Skin-specific retroviral-like aspartic protease) (SASPase) (Skin aspartic protease) (TPA-inducible aspartic proteinase-like protein)
ruditapes_c21321	proteolysis	protein metabolism	P	Retroviral-like aspartic protease 1 (EC 3.4.23.-) (Skin-specific retroviral-like aspartic protease) (SASPase) (Skin aspartic protease) (TPA-inducible aspartic proteinase-like protein)
ruditapes_c21321	skin development	developmental processes	P	Retroviral-like aspartic protease 1 (EC 3.4.23.-) (Skin-specific retroviral-like aspartic protease) (SASPase) (Skin aspartic protease) (TPA-inducible aspartic proteinase-like protein)
ruditapes2_c3708	positive regulation of dopamine receptor signaling pathway	signal transduction	P	Caveolin-2
ruditapes2_c3708	vesicle fusion	transport	P	Caveolin-2
ruditapes2_c3708	vesicle fusion	cell organization and biogenesis	P	Caveolin-2
ruditapes2_c3708	mitochondrion organization	cell organization and biogenesis	P	Caveolin-2
ruditapes2_c3708	skeletal muscle fiber development	developmental processes	P	Caveolin-2
ruditapes2_c3708	endoplasmic reticulum organization	cell organization and biogenesis	P	Caveolin-2
ruditapes2_c3708	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	Caveolin-2
ruditapes2_c3708	vesicle docking	transport	P	Caveolin-2
ruditapes_c24016	multicellular organismal development	developmental processes	P	"Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein)"
ruditapes_c24016	piRNA metabolic process	RNA metabolism	P	"Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein)"
ruditapes_c24016	cell differentiation	other biological processes	P	"Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein)"
ruditapes_c24016	DNA methylation during gametogenesis	DNA metabolism	P	"Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein)"
ruditapes_c24016	gene silencing by RNA	other metabolic processes	P	"Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein)"
ruditapes_c24016	male meiosis	cell cycle and proliferation	P	"Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein)"
ruditapes_c24016	meiosis	cell cycle and proliferation	P	"Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein)"
ruditapes_c24016	spermatogenesis	other biological processes	P	"Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein)"
ruditapes_c19378	metabolic process	other metabolic processes	P	Neuraminidase (EC 3.2.1.18)
ruditapes_c19378	carbohydrate metabolic process	other metabolic processes	P	Neuraminidase (EC 3.2.1.18)
ruditapes_c12353	carbohydrate metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes_c12353	cellular metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes_c24861	peptidoglycan biosynthetic process	other metabolic processes	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c24861	regulation of cell shape	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c24861	cell wall organization	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c16359	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c16359	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c16359	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c16359	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c16359	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c12214	translation	protein metabolism	P	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC 6.3.5.-)
ruditapes_c11342	polyamine biosynthetic process	other metabolic processes	P	Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19)
ruditapes_c11342	arginine catabolic process	other metabolic processes	P	Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19)
ruditapes_c11342	spermidine biosynthetic process	other metabolic processes	P	Biosynthetic arginine decarboxylase (ADC) (EC 4.1.1.19)
ruditapes_c17788	glycine catabolic process	other metabolic processes	P	Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein)
ruditapes_c10581	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c10581	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c10581	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_c2515	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2515	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2515	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2515	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2515	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_c12201	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c12201	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c12201	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c12201	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c11013	tRNA processing	RNA metabolism	P	tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase)
ruditapes_c28694	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28694	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28694	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28694	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28694	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c28694	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c11042	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c11042	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c11042	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c11042	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c11042	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c12712	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12712	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12712	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12712	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12712	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c11631	translation	protein metabolism	P	50S ribosomal protein L30
ruditapes_c31369	glycine decarboxylation via glycine cleavage system	other metabolic processes	P	Glycine cleavage system H protein
ruditapes_c31369	glycine catabolic process	other metabolic processes	P	Glycine cleavage system H protein
ruditapes_c12990	double-strand break repair	stress response	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_c12990	double-strand break repair	DNA metabolism	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_c12990	DNA repair	stress response	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_c12990	DNA repair	DNA metabolism	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_c12990	response to DNA damage stimulus	stress response	P	ATP-dependent helicase/nuclease subunit A (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddA)
ruditapes_c22990	prolyl-tRNA aminoacylation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c22990	prolyl-tRNA aminoacylation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c22990	tRNA aminoacylation for protein translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c22990	tRNA aminoacylation for protein translation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c22990	translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c30918	translation	protein metabolism	P	50S ribosomal protein L32
ruditapes_lrc14588	aromatic amino acid family biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_lrc14588	metabolic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_lrc14588	tryptophan biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_lrc14588	cellular amino acid biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes2_c1912	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes2_c1912	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes_c19001	glycolysis	other metabolic processes	P	Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI)
ruditapes_c19001	gluconeogenesis	other metabolic processes	P	Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI)
ruditapes_c16913	glycogen biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_c16913	glucan biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_c16913	biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes2_c1207	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c1207	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c1207	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c1207	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c1207	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_c6930	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c6930	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c6930	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c16531	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_c16098	translation	protein metabolism	P	30S ribosomal protein S18
ruditapes_c14198	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes_c14198	transport	transport	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes_c15056	threonine biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes_c15056	phosphorylation	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes_c15056	cellular amino acid biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes_c15101	metabolic process	other metabolic processes	P	Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta) (SCS-beta)
ruditapes_c15101	tricarboxylic acid cycle	other metabolic processes	P	Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta) (SCS-beta)
ruditapes_c3691	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c3691	cellular amino acid biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c7439	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c7439	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c19598	RNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c19598	biopolymer modification	other metabolic processes	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c19598	tRNA processing	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c19598	tRNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c26181	cellular amino acid biosynthetic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes_c26181	histidine biosynthetic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes_c26181	metabolic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes_c26137	proteolysis	protein metabolism	P	Probable dipeptidyl-peptidase 5 (EC 3.4.14.-) (Dipeptidyl-peptidase V) (DPP V) (DppV)
ruditapes_c27879	proteolysis	protein metabolism	P	Probable dipeptidyl-peptidase 5 (EC 3.4.14.-) (Dipeptidyl-peptidase V) (DPP V) (DppV)
ruditapes_c27983	lipid metabolic process	other metabolic processes	P	Probable feruloyl esterase A (EC 3.1.1.73) (Ferulic acid esterase A)
ruditapes_c27983	xylan catabolic process	other metabolic processes	P	Probable feruloyl esterase A (EC 3.1.1.73) (Ferulic acid esterase A)
ruditapes_c11979	xylan catabolic process	other metabolic processes	P	Probable feruloyl esterase B-2 (EC 3.1.1.73) (Ferulic acid esterase B-2) (FAEB-2)
ruditapes_c11979	carbohydrate metabolic process	other metabolic processes	P	Probable feruloyl esterase B-2 (EC 3.1.1.73) (Ferulic acid esterase B-2) (FAEB-2)
ruditapes_c11979	polysaccharide catabolic process	other metabolic processes	P	Probable feruloyl esterase B-2 (EC 3.1.1.73) (Ferulic acid esterase B-2) (FAEB-2)
ruditapes_c29750	ribosome biogenesis	other biological processes	P	ATP-dependent RNA helicase dbp3 (EC 3.6.4.13)
ruditapes_c29750	rRNA processing	RNA metabolism	P	ATP-dependent RNA helicase dbp3 (EC 3.6.4.13)
ruditapes_lrc39091	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit M (eIF3m)
ruditapes_lrc39091	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit M (eIF3m)
ruditapes2_c3380	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit M (eIF3m)
ruditapes2_c3380	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit M (eIF3m)
ruditapes_c13080	lipid metabolic process	other metabolic processes	P	Patatin-like phospholipase domain-containing protein ATEG
ruditapes_c13080	lipid catabolic process	other metabolic processes	P	Patatin-like phospholipase domain-containing protein ATEG
ruditapes_c13080	metabolic process	other metabolic processes	P	Patatin-like phospholipase domain-containing protein ATEG
ruditapes_c22843	carbohydrate transport	transport	P	Protein RFT1 homolog
ruditapes_c22843	lipid transport	transport	P	Protein RFT1 homolog
ruditapes_c22843	transport	transport	P	Protein RFT1 homolog
ruditapes_lrc25717	biosynthetic process	other metabolic processes	P	"Soluble starch synthase 1, chloroplastic/amyloplastic (EC 2.4.1.21) (SSS 1) (Starch synthase I)"
ruditapes_lrc25717	glucan biosynthetic process	other metabolic processes	P	"Soluble starch synthase 1, chloroplastic/amyloplastic (EC 2.4.1.21) (SSS 1) (Starch synthase I)"
ruditapes_lrc25717	starch biosynthetic process	other metabolic processes	P	"Soluble starch synthase 1, chloroplastic/amyloplastic (EC 2.4.1.21) (SSS 1) (Starch synthase I)"
ruditapes_lrc25717	amylopectin biosynthetic process	other metabolic processes	P	"Soluble starch synthase 1, chloroplastic/amyloplastic (EC 2.4.1.21) (SSS 1) (Starch synthase I)"
ruditapes2_c1778	auxin mediated signaling pathway	signal transduction	P	Auxin response factor 14
ruditapes2_c1778	"transcription, DNA-dependent"	RNA metabolism	P	Auxin response factor 14
ruditapes2_c1778	response to hormone stimulus	other biological processes	P	Auxin response factor 14
ruditapes2_c1778	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Auxin response factor 14
ruditapes_c19137	lateral root formation	developmental processes	P	Transport inhibitor response 1-like protein Os05g0150500 (TIR1-like protein)
ruditapes_c19137	response to auxin stimulus	other biological processes	P	Transport inhibitor response 1-like protein Os05g0150500 (TIR1-like protein)
ruditapes_c19137	response to molecule of bacterial origin	other biological processes	P	Transport inhibitor response 1-like protein Os05g0150500 (TIR1-like protein)
ruditapes_c19137	pollen maturation	developmental processes	P	Transport inhibitor response 1-like protein Os05g0150500 (TIR1-like protein)
ruditapes_c19137	stamen development	developmental processes	P	Transport inhibitor response 1-like protein Os05g0150500 (TIR1-like protein)
ruditapes_c19137	cellular response to phosphate starvation	stress response	P	Transport inhibitor response 1-like protein Os05g0150500 (TIR1-like protein)
ruditapes_c19137	developmental growth	other biological processes	P	Transport inhibitor response 1-like protein Os05g0150500 (TIR1-like protein)
ruditapes_c19137	auxin mediated signaling pathway	signal transduction	P	Transport inhibitor response 1-like protein Os05g0150500 (TIR1-like protein)
ruditapes_c28790	oxidation reduction	other metabolic processes	P	"Phytoene dehydrogenase, chloroplastic/chromoplastic (EC 1.3.99.-) (Phytoene desaturase)"
ruditapes_c28790	carotene biosynthetic process	other metabolic processes	P	"Phytoene dehydrogenase, chloroplastic/chromoplastic (EC 1.3.99.-) (Phytoene desaturase)"
ruditapes_c28790	carotenoid biosynthetic process	other metabolic processes	P	"Phytoene dehydrogenase, chloroplastic/chromoplastic (EC 1.3.99.-) (Phytoene desaturase)"
ruditapes_c20010	carbohydrate metabolic process	other metabolic processes	P	"Probable monogalactosyldiacylglycerol synthase 3, chloroplastic (OsMGD3) (EC 2.4.1.46)"
ruditapes_c20010	fatty acid metabolic process	other metabolic processes	P	"Probable monogalactosyldiacylglycerol synthase 3, chloroplastic (OsMGD3) (EC 2.4.1.46)"
ruditapes_c20010	cellular response to phosphate starvation	stress response	P	"Probable monogalactosyldiacylglycerol synthase 3, chloroplastic (OsMGD3) (EC 2.4.1.46)"
ruditapes_c20010	lipid glycosylation	other metabolic processes	P	"Probable monogalactosyldiacylglycerol synthase 3, chloroplastic (OsMGD3) (EC 2.4.1.46)"
ruditapes_c20010	galactolipid metabolic process	other metabolic processes	P	"Probable monogalactosyldiacylglycerol synthase 3, chloroplastic (OsMGD3) (EC 2.4.1.46)"
ruditapes_c20010	glycolipid biosynthetic process	other metabolic processes	P	"Probable monogalactosyldiacylglycerol synthase 3, chloroplastic (OsMGD3) (EC 2.4.1.46)"
ruditapes_c28187	gene silencing by RNA	other metabolic processes	P	Probable RNA-dependent RNA polymerase 1 (OsRDR1) (EC 2.7.7.48)
ruditapes_c28187	response to virus	other biological processes	P	Probable RNA-dependent RNA polymerase 1 (OsRDR1) (EC 2.7.7.48)
ruditapes_c28187	response to salicylic acid stimulus	other biological processes	P	Probable RNA-dependent RNA polymerase 1 (OsRDR1) (EC 2.7.7.48)
ruditapes_c28187	positive regulation of posttranscriptional gene silencing	other metabolic processes	P	Probable RNA-dependent RNA polymerase 1 (OsRDR1) (EC 2.7.7.48)
ruditapes_c14169	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase-like protein E2 (EC 2.4.1.-) (OsCslE2)
ruditapes_lrc32166	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase-like protein E2 (EC 2.4.1.-) (OsCslE2)
ruditapes_c14169	cell wall organization	cell organization and biogenesis	P	Cellulose synthase-like protein E2 (EC 2.4.1.-) (OsCslE2)
ruditapes_lrc32166	cell wall organization	cell organization and biogenesis	P	Cellulose synthase-like protein E2 (EC 2.4.1.-) (OsCslE2)
ruditapes_c6991	protein amino acid ADP-ribosylation	protein metabolism	P	Poly [ADP-ribose] polymerase 3 (PARP-3) (EC 2.4.2.30) (NAD(+) ADP-ribosyltransferase 3) (ADPRT-3) (Poly[ADP-ribose] synthase 3)
ruditapes_c27113	translational initiation	protein metabolism	P	Putative eukaryotic initiation factor 4A-2 (eIF-4A-2) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A-2) (DEAD-box ATP-dependent RNA helicase 19)
ruditapes_c27113	translation	protein metabolism	P	Putative eukaryotic initiation factor 4A-2 (eIF-4A-2) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A-2) (DEAD-box ATP-dependent RNA helicase 19)
ruditapes_c20182	oxidation reduction	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c20182	ATP synthesis coupled electron transport	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c20182	transport	transport	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes2_c1102	translation	protein metabolism	P	"50S ribosomal protein L33, chloroplastic"
ruditapes_c24646	electron transport chain	other metabolic processes	P	Apocytochrome f
ruditapes_c24646	transport	transport	P	Apocytochrome f
ruditapes_c24646	photosynthesis	other metabolic processes	P	Apocytochrome f
ruditapes2_c2569	methylation	other metabolic processes	P	Large structural protein (Protein L) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_c2569	mRNA capping	RNA metabolism	P	Large structural protein (Protein L) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_c2569	mRNA processing	RNA metabolism	P	Large structural protein (Protein L) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_c2569	metabolic process	other metabolic processes	P	Large structural protein (Protein L) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_c2569	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Large structural protein (Protein L) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes2_c2569	RNA biosynthetic process	RNA metabolism	P	Large structural protein (Protein L) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_lrc7991	defense response to bacterium	stress response	P	Big defensin (AiBD)
ruditapes_lrc7991	killing of cells of another organism	other biological processes	P	Big defensin (AiBD)
ruditapes_lrc7991	defense response	stress response	P	Big defensin (AiBD)
ruditapes_lrc7991	defense response to Gram-positive bacterium	stress response	P	Big defensin (AiBD)
ruditapes_lrc7991	defense response to Gram-negative bacterium	stress response	P	Big defensin (AiBD)
ruditapes_lrc7991	defense response to fungus	stress response	P	Big defensin (AiBD)
ruditapes2_c2946	metabolic process	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes2_c2946	oxidation reduction	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes2_c2946	pyridoxine biosynthetic process	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c23837	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c23837	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c23837	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c23837	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c10030	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c23773	oxidation reduction	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c23773	metabolic process	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c23773	pyridoxine biosynthetic process	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes2_c2737	lipoate biosynthetic process	other metabolic processes	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes2_c2737	protein modification process	protein metabolism	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes2_c804	tRNA seleno-modification	RNA metabolism	P	tRNA 2-selenouridine synthase (EC 2.9.1.-) (Selenophosphate-dependent tRNA 2-selenouridine synthase)
ruditapes_c6556	tRNA processing	RNA metabolism	P	Ribonuclease T (EC 3.1.13.-) (Exoribonuclease T) (RNase T)
ruditapes_c6556	RNA processing	RNA metabolism	P	Ribonuclease T (EC 3.1.13.-) (Exoribonuclease T) (RNase T)
ruditapes_c15679	lipid biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_c15679	lipid A biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_c25796	iron-sulfur cluster assembly	other metabolic processes	P	Iron-sulfur cluster insertion protein ErpA
ruditapes_c9440	cell division	other biological processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c9440	peptidoglycan biosynthetic process	other metabolic processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c9440	carbohydrate metabolic process	other metabolic processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c9440	metabolic process	other metabolic processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c9440	cell cycle	cell cycle and proliferation	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c9440	regulation of cell shape	cell organization and biogenesis	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c9440	cell wall organization	cell organization and biogenesis	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c30169	ion transport	transport	P	Zinc import ATP-binding protein ZnuC (EC 3.6.3.-)
ruditapes_c30169	transport	transport	P	Zinc import ATP-binding protein ZnuC (EC 3.6.3.-)
ruditapes_c30169	ATP catabolic process	other metabolic processes	P	Zinc import ATP-binding protein ZnuC (EC 3.6.3.-)
ruditapes_c30169	zinc ion transport	transport	P	Zinc import ATP-binding protein ZnuC (EC 3.6.3.-)
ruditapes_c13296	lipid biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c13296	lipid A biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c25368	protein folding	protein metabolism	P	Chaperone protein TorD
ruditapes_c28112	autophagy	other metabolic processes	P	Ectopic P granules protein 5 homolog
ruditapes_c10113	apoptosis	death	P	Protein prune homolog 2 (BNIP2 motif-containing molecule at the C-terminal region 1)
ruditapes_c12603	apoptosis	death	P	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)
ruditapes_c12603	cell differentiation	other biological processes	P	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)
ruditapes_c12603	multicellular organismal development	developmental processes	P	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)
ruditapes_c12603	translation	protein metabolism	P	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)
ruditapes_c1586	proteolysis	protein metabolism	P	Carboxypeptidase O (CPO) (EC 3.4.17.-)
ruditapes_c28705	oxidation reduction	other metabolic processes	P	Cytochrome P450 2U1 (EC 1.14.14.1)
ruditapes_c23998	oxidation reduction	other metabolic processes	P	Cytochrome P450 2U1 (EC 1.14.14.1)
ruditapes_c6106	proteolysis	protein metabolism	P	Suppressor of tumorigenicity 14 protein homolog (EC 3.4.21.109) (Serine protease 14)
ruditapes_c31868	response to hypoxia	stress response	P	Alcohol dehydrogenase 2 (EC 1.1.1.1)
ruditapes_c31868	response to osmotic stress	stress response	P	Alcohol dehydrogenase 2 (EC 1.1.1.1)
ruditapes_c31868	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase 2 (EC 1.1.1.1)
ruditapes_c31868	response to salt stress	stress response	P	Alcohol dehydrogenase 2 (EC 1.1.1.1)
ruditapes_c31868	response to cadmium ion	other biological processes	P	Alcohol dehydrogenase 2 (EC 1.1.1.1)
ruditapes_c14178	biosynthetic process	other metabolic processes	P	Probable sucrose-phosphate synthase 1 (EC 2.4.1.14) (Sucrose phosphate synthase 1F) (OsSPS1F) (UDP-glucose-fructose-phosphate glucosyltransferase)
ruditapes_c14178	sucrose metabolic process	other metabolic processes	P	Probable sucrose-phosphate synthase 1 (EC 2.4.1.14) (Sucrose phosphate synthase 1F) (OsSPS1F) (UDP-glucose-fructose-phosphate glucosyltransferase)
ruditapes_c27218	oxidation reduction	other metabolic processes	P	Gibberellin 20 oxidase 2 (EC 1.14.11.-) (GA 20-oxidase 2) (Gibberellin C-20 oxidase 2) (Os20ox2) (Protein semidwarf-1)
ruditapes_c20326	oxidation reduction	other metabolic processes	P	Gibberellin 20 oxidase 2 (EC 1.14.11.-) (GA 20-oxidase 2) (Gibberellin C-20 oxidase 2) (Os20ox2) (Protein semidwarf-1)
ruditapes_c21661	glutamate biosynthetic process	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes_c21661	glutamine metabolic process	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes_c21661	ammonia assimilation cycle	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes_c21661	cellular amino acid biosynthetic process	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes_c21661	metabolic process	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes_c21661	developmental growth	other biological processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes_c21661	response to ammonium ion	other biological processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes_c21661	oxidation reduction	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes_c21661	nitrogen compound metabolic process	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes_c28586	response to osmotic stress	stress response	P	Probable protein phosphatase 2C 6 (OsPP2C06) (EC 3.1.3.16)
ruditapes_c28586	negative regulation of abscisic acid mediated signaling	signal transduction	P	Probable protein phosphatase 2C 6 (OsPP2C06) (EC 3.1.3.16)
ruditapes_c28586	photoinhibition	other metabolic processes	P	Probable protein phosphatase 2C 6 (OsPP2C06) (EC 3.1.3.16)
ruditapes_c28586	response to water deprivation	stress response	P	Probable protein phosphatase 2C 6 (OsPP2C06) (EC 3.1.3.16)
ruditapes_c28586	response to abscisic acid stimulus	other biological processes	P	Probable protein phosphatase 2C 6 (OsPP2C06) (EC 3.1.3.16)
ruditapes_c28586	protein amino acid dephosphorylation	protein metabolism	P	Probable protein phosphatase 2C 6 (OsPP2C06) (EC 3.1.3.16)
ruditapes_c28586	response to heat	stress response	P	Probable protein phosphatase 2C 6 (OsPP2C06) (EC 3.1.3.16)
ruditapes_c28586	regulation of abscisic acid mediated signaling	signal transduction	P	Probable protein phosphatase 2C 6 (OsPP2C06) (EC 3.1.3.16)
ruditapes_c28586	response to cold	stress response	P	Probable protein phosphatase 2C 6 (OsPP2C06) (EC 3.1.3.16)
ruditapes_c28586	regulation of stomatal movement	other biological processes	P	Probable protein phosphatase 2C 6 (OsPP2C06) (EC 3.1.3.16)
ruditapes_c30758	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor BPE (Basic helix-loop-helix protein 31) (AtbHLH31) (bHLH 31) (Protein BIG PETAL) (Transcription factor EN 88) (bHLH transcription factor bHLH031)
ruditapes_c30758	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor BPE (Basic helix-loop-helix protein 31) (AtbHLH31) (bHLH 31) (Protein BIG PETAL) (Transcription factor EN 88) (bHLH transcription factor bHLH031)
ruditapes_c30758	multicellular organismal development	developmental processes	P	Transcription factor BPE (Basic helix-loop-helix protein 31) (AtbHLH31) (bHLH 31) (Protein BIG PETAL) (Transcription factor EN 88) (bHLH transcription factor bHLH031)
ruditapes_c30758	petal morphogenesis	developmental processes	P	Transcription factor BPE (Basic helix-loop-helix protein 31) (AtbHLH31) (bHLH 31) (Protein BIG PETAL) (Transcription factor EN 88) (bHLH transcription factor bHLH031)
ruditapes_c27732	NADP catabolic process	other metabolic processes	P	Probable L-aspartate dehydrogenase (EC 1.4.1.21)
ruditapes_c27732	NAD biosynthetic process	other metabolic processes	P	Probable L-aspartate dehydrogenase (EC 1.4.1.21)
ruditapes_c27732	oxidation reduction	other metabolic processes	P	Probable L-aspartate dehydrogenase (EC 1.4.1.21)
ruditapes_c27732	pyridine nucleotide biosynthetic process	other metabolic processes	P	Probable L-aspartate dehydrogenase (EC 1.4.1.21)
ruditapes_c8958	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c8958	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c8958	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c24772	ion transport	transport	P	Piezo-type mechanosensitive ion channel component 1 (Membrane protein induced by beta-amyloid treatment) (Mib) (Protein FAM38A)
ruditapes_c24772	positive regulation of integrin activation	protein metabolism	P	Piezo-type mechanosensitive ion channel component 1 (Membrane protein induced by beta-amyloid treatment) (Mib) (Protein FAM38A)
ruditapes_c24772	transport	transport	P	Piezo-type mechanosensitive ion channel component 1 (Membrane protein induced by beta-amyloid treatment) (Mib) (Protein FAM38A)
ruditapes_c24772	positive regulation of cell-cell adhesion mediated by integrin	cell adhesion	P	Piezo-type mechanosensitive ion channel component 1 (Membrane protein induced by beta-amyloid treatment) (Mib) (Protein FAM38A)
ruditapes_c17444	phosphorylation	other metabolic processes	P	Triple functional domain protein (EC 2.7.11.1)
ruditapes_c17444	protein amino acid phosphorylation	protein metabolism	P	Triple functional domain protein (EC 2.7.11.1)
ruditapes_c17444	regulation of Rho protein signal transduction	signal transduction	P	Triple functional domain protein (EC 2.7.11.1)
ruditapes_lrc18963	response to oxidative stress	stress response	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (Complex I-B17.2) (CI-B17.2) (CIB17.2) (NADH-ubiquinone oxidoreductase subunit B17.2)
ruditapes_lrc18963	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (Complex I-B17.2) (CI-B17.2) (CIB17.2) (NADH-ubiquinone oxidoreductase subunit B17.2)
ruditapes_lrc18963	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (Complex I-B17.2) (CI-B17.2) (CIB17.2) (NADH-ubiquinone oxidoreductase subunit B17.2)
ruditapes2_lrc3610	negative regulation of translation	protein metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc3610	negative regulation of cell growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc3610	induction of apoptosis	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc3610	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc3610	induction of apoptosis by extracellular signals	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc3610	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc3610	apoptotic nuclear changes	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc3610	apoptotic nuclear changes	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc3610	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_s38199	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Complex I-B14) (CI-B14) (NADH-ubiquinone oxidoreductase B14 subunit)
ruditapes_s38199	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Complex I-B14) (CI-B14) (NADH-ubiquinone oxidoreductase B14 subunit)
ruditapes2_lrc5091	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Complex I-B14) (CI-B14) (NADH-ubiquinone oxidoreductase B14 subunit)
ruditapes2_lrc4292	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Complex I-B14) (CI-B14) (NADH-ubiquinone oxidoreductase B14 subunit)
ruditapes2_c1438	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Complex I-B14) (CI-B14) (NADH-ubiquinone oxidoreductase B14 subunit)
ruditapes2_lrc5227	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Complex I-B14) (CI-B14) (NADH-ubiquinone oxidoreductase B14 subunit)
ruditapes2_lrc4292	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Complex I-B14) (CI-B14) (NADH-ubiquinone oxidoreductase B14 subunit)
ruditapes2_lrc5091	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Complex I-B14) (CI-B14) (NADH-ubiquinone oxidoreductase B14 subunit)
ruditapes2_lrc5227	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Complex I-B14) (CI-B14) (NADH-ubiquinone oxidoreductase B14 subunit)
ruditapes2_c1438	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Complex I-B14) (CI-B14) (NADH-ubiquinone oxidoreductase B14 subunit)
ruditapes_c2375	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (Complex I-19kD) (CI-19kD) (NADH-ubiquinone oxidoreductase 19 kDa subunit)
ruditapes2_c905	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (Complex I-19kD) (CI-19kD) (NADH-ubiquinone oxidoreductase 19 kDa subunit)
ruditapes2_c905	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (Complex I-19kD) (CI-19kD) (NADH-ubiquinone oxidoreductase 19 kDa subunit)
ruditapes_c2375	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (Complex I-19kD) (CI-19kD) (NADH-ubiquinone oxidoreductase 19 kDa subunit)
ruditapes_lrc32870	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_lrc32870	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_lrc39202	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_lrc39202	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc6338	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc4498	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_s36439	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc34277	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc34965	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc34277	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc35428	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc35428	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc34965	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc4498	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc6338	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc5487	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc5487	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_s36439	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_c3889	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_lrc3503	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_lrc6438	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_lrc35477	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_c347	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_s40474	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_lrc3577	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_lrc3698	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_c347	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_lrc35477	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_lrc15839	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_lrc33041	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_lrc3503	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_lrc32659	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_c3889	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_lrc25376	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_lrc15839	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_lrc25376	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_lrc3698	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_lrc32659	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_lrc6438	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_lrc33041	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_lrc3577	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes_s40474	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (Complex I-SGDH) (CI-SGDH) (NADH-ubiquinone oxidoreductase SGDH subunit)"
ruditapes2_c6292	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 subunit C2 (Complex I-B14.5b) (CI-B14.5b) (NADH-ubiquinone oxidoreductase subunit B14.5b)
ruditapes2_c3128	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 subunit C2 (Complex I-B14.5b) (CI-B14.5b) (NADH-ubiquinone oxidoreductase subunit B14.5b)
ruditapes2_c6292	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 subunit C2 (Complex I-B14.5b) (CI-B14.5b) (NADH-ubiquinone oxidoreductase subunit B14.5b)
ruditapes2_c3128	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 subunit C2 (Complex I-B14.5b) (CI-B14.5b) (NADH-ubiquinone oxidoreductase subunit B14.5b)
ruditapes2_c6292	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 subunit C2 (Complex I-B14.5b) (CI-B14.5b) (NADH-ubiquinone oxidoreductase subunit B14.5b)
ruditapes2_c3128	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 subunit C2 (Complex I-B14.5b) (CI-B14.5b) (NADH-ubiquinone oxidoreductase subunit B14.5b)
ruditapes2_c1582	electron transport chain	other metabolic processes	P	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD)"
ruditapes2_c1582	apoptosis	death	P	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD)"
ruditapes2_c1582	oxidation reduction	other metabolic processes	P	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD)"
ruditapes2_c1582	ATP metabolic process	other metabolic processes	P	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD)"
ruditapes2_c1582	ATP synthesis coupled electron transport	other metabolic processes	P	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD)"
ruditapes2_c1582	transport	transport	P	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD)"
ruditapes2_c1582	cellular respiration	other metabolic processes	P	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD)"
ruditapes2_c1582	regulation of mitochondrial membrane potential	other biological processes	P	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD)"
ruditapes_c26458	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_c26458	response to oxidative stress	stress response	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_c26458	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_c26458	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_lrc34690	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_lrc38181	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_lrc32591	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_lrc32591	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_lrc38181	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_lrc34690	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_lrc34462	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes2_c5448	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes2_c3945	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_lrc34421	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_lrc35703	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_lrc34462	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes2_c5448	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes2_c3945	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_lrc34421	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_lrc35703	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)"
ruditapes_c467	transport	transport	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes_c2762	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes_c2762	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes_c2762	transport	transport	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes_c467	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes_c467	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes2_c3215	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 24 kDa subunit)"
ruditapes2_c3215	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 24 kDa subunit)"
ruditapes2_c3215	transport	transport	P	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 24 kDa subunit)"
ruditapes2_c3215	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 24 kDa subunit)"
ruditapes_lrc11492	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_c30704	lipid metabolic process	other metabolic processes	P	"Acyl-CoA synthetase family member 2, mitochondrial (EC 6.2.1.-)"
ruditapes_c30704	metabolic process	other metabolic processes	P	"Acyl-CoA synthetase family member 2, mitochondrial (EC 6.2.1.-)"
ruditapes_c30704	fatty acid metabolic process	other metabolic processes	P	"Acyl-CoA synthetase family member 2, mitochondrial (EC 6.2.1.-)"
ruditapes_c20774	carbohydrate transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 10 (Glucose transporter type 10) (GLUT-10)"
ruditapes_c20774	transmembrane transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 10 (Glucose transporter type 10) (GLUT-10)"
ruditapes_c20774	transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 10 (Glucose transporter type 10) (GLUT-10)"
ruditapes_c29433	negative regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Lateral signaling target protein 2 homolog (Zinc finger FYVE domain-containing protein 28)
ruditapes_c29433	negative regulation of epidermal growth factor receptor activity	signal transduction	P	Lateral signaling target protein 2 homolog (Zinc finger FYVE domain-containing protein 28)
ruditapes_c29433	negative regulation of epidermal growth factor receptor activity	other metabolic processes	P	Lateral signaling target protein 2 homolog (Zinc finger FYVE domain-containing protein 28)
ruditapes_c27095	lipid biosynthetic process	other metabolic processes	P	Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 4 (EC 4.2.1.134) (3-hydroxyacyl-CoA dehydratase 4) (HACD4) (Protein tyrosine phosphatase-like protein PTPLAD2) (Protein-tyrosine phosphatase-like A domain-containing protein 2)
ruditapes_c27095	fatty acid biosynthetic process	other metabolic processes	P	Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 4 (EC 4.2.1.134) (3-hydroxyacyl-CoA dehydratase 4) (HACD4) (Protein tyrosine phosphatase-like protein PTPLAD2) (Protein-tyrosine phosphatase-like A domain-containing protein 2)
ruditapes_c16027	methylation	other metabolic processes	P	Putative methyltransferase NSUN3 (EC 2.1.1.-) (NOL1/NOP2/Sun domain family member 3)
ruditapes_c645	barrier septum formation	cell organization and biogenesis	P	GTP-binding protein 8
ruditapes_c26591	biological_process	other biological processes	P	Vacuolar protein sorting-associated protein 8 homolog
ruditapes2_c2518	biological_process	other biological processes	P	Leucine-rich repeat and IQ domain-containing protein 1
ruditapes_c28675	carbohydrate biosynthetic process	other metabolic processes	P	Pseudaminic acid synthase (EC 2.5.1.97) (Pseudaminic acid biosynthesis protein I)
ruditapes2_c5420	neuron migration	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_lrc4927	nervous system development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_lrc5323	neuron migration	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_c5420	cell differentiation	other biological processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_c16385	nervous system development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc34302	nervous system development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_lrc5323	multicellular organismal development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc34302	cell differentiation	other biological processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc35638	neuron migration	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_c16385	cell differentiation	other biological processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_lrc4927	cell differentiation	other biological processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_c5420	nervous system development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_lrc4927	neuron migration	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_c16385	neuron migration	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_c5420	multicellular organismal development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc35638	cell differentiation	other biological processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc34302	neuron migration	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc35638	multicellular organismal development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_c16385	multicellular organismal development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc34302	multicellular organismal development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc35638	nervous system development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_lrc4927	multicellular organismal development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_lrc5323	cell differentiation	other biological processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_lrc5323	nervous system development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes2_lrc3995	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_lrc35899	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_lrc36859	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc6973	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_s37566	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc5186	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_c6539	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_s37566	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc3459	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc6973	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_c6539	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc3995	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc3459	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_c6539	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc5938	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_lrc36045	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc5186	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc6288	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_lrc35899	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc5186	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_s37566	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_lrc36045	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc5938	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc6288	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc5938	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_lrc36045	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_lrc36859	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_s36602	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc3459	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_s36602	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc6973	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_lrc35899	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc3995	defense response to protozoan	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_lrc36859	defense response to bacterium	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes2_lrc6288	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_s36602	innate immune response	stress response	P	Putative defense protein 3 (DFP-3)
ruditapes_c12396	interspecies interaction between organisms	other biological processes	P	Gag-Pro polyprotein (Pr76Gag-Pro) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); Nucleocapsid protein p15-pro (NC') (NC-pro); Protease (PR) (EC 3.4.23.-); p1; Transframe peptide (TFP) (p8) (pX)]
ruditapes_c12396	viral reproduction	other biological processes	P	Gag-Pro polyprotein (Pr76Gag-Pro) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); Nucleocapsid protein p15-pro (NC') (NC-pro); Protease (PR) (EC 3.4.23.-); p1; Transframe peptide (TFP) (p8) (pX)]
ruditapes_c12396	proteolysis	protein metabolism	P	Gag-Pro polyprotein (Pr76Gag-Pro) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); Nucleocapsid protein p15-pro (NC') (NC-pro); Protease (PR) (EC 3.4.23.-); p1; Transframe peptide (TFP) (p8) (pX)]
ruditapes_c29202	gluconeogenesis	other metabolic processes	P	Phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (PEPCK) (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase)
ruditapes_c8234	glutathione biosynthetic process	other metabolic processes	P	Carboxylate-amine ligase RHA1
ruditapes_c17922	methionine transport	transport	P	Methionine import ATP-binding protein MetN 2 (EC 3.6.3.-)
ruditapes_c17922	amino acid transport	transport	P	Methionine import ATP-binding protein MetN 2 (EC 3.6.3.-)
ruditapes_c17922	ATP catabolic process	other metabolic processes	P	Methionine import ATP-binding protein MetN 2 (EC 3.6.3.-)
ruditapes_c17922	transport	transport	P	Methionine import ATP-binding protein MetN 2 (EC 3.6.3.-)
ruditapes_c31101	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c31101	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c31101	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c31101	cell division	other biological processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c31101	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c31101	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c22525	translational elongation	protein metabolism	P	Elongation factor G 2 (EF-G 2)
ruditapes_c22525	translation	protein metabolism	P	Elongation factor G 2 (EF-G 2)
ruditapes_c22525	GTP catabolic process	other metabolic processes	P	Elongation factor G 2 (EF-G 2)
ruditapes_lrc32532	translation	protein metabolism	P	30S ribosomal protein S6
ruditapes_c26165	translation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c26165	biosynthetic process	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c26165	translational initiation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c26165	methylation	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes2_c2204	methylation	other metabolic processes	P	Putative ribosomal RNA large subunit methyltransferase H 2 (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase 2) (rRNA (pseudouridine-N3-)-methyltransferase RlmH 2)
ruditapes2_c2204	rRNA processing	RNA metabolism	P	Putative ribosomal RNA large subunit methyltransferase H 2 (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase 2) (rRNA (pseudouridine-N3-)-methyltransferase RlmH 2)
ruditapes_c11262	phosphorylation	other metabolic processes	P	Putative ATP:guanido phosphotransferase CPR
ruditapes_c14053	isoprenoid biosynthetic process	other metabolic processes	P	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT)
ruditapes2_c6355	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes2_c6355	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c35413	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c35413	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes2_lrc4163	methylglyoxal biosynthetic process	other metabolic processes	P	Methylglyoxal synthase (MGS) (EC 4.2.3.3)
ruditapes2_c6209	peptidoglycan metabolic process	other metabolic processes	P	Membrane-bound lytic murein transglycosylase F (EC 4.2.2.n1) (Murein lyase F)
ruditapes2_c6209	cell wall organization	cell organization and biogenesis	P	Membrane-bound lytic murein transglycosylase F (EC 4.2.2.n1) (Murein lyase F)
ruditapes2_c6209	transport	transport	P	Membrane-bound lytic murein transglycosylase F (EC 4.2.2.n1) (Murein lyase F)
ruditapes_c7300	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator BetI
ruditapes_c7300	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator BetI
ruditapes_c11616	glutathione biosynthetic process	other metabolic processes	P	Carboxylate-amine ligase YbdK (EC 6.3.-.-)
ruditapes_c29308	metabolic process	other metabolic processes	P	Acetyl esterase (EC 3.1.1.-)
ruditapes_c27842	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Probable molybdenum cofactor guanylyltransferase (MoCo guanylyltransferase) (EC 2.7.7.77) (GTP:molybdopterin guanylyltransferase) (Mo-MPT guanylyltransferase) (Molybdopterin guanylyltransferase) (Molybdopterin-guanine dinucleotide synthase) (MGD synthase)
ruditapes2_c1021	carbohydrate metabolic process	other metabolic processes	P	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)
ruditapes2_c1021	galactose metabolic process	other metabolic processes	P	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)
ruditapes2_c590	proteolysis	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-)
ruditapes2_c590	protein catabolic process	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-)
ruditapes_c21535	methylation	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes_c21535	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes_c21535	phospholipid metabolic process	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes2_c1234	autophagy	other metabolic processes	P	Vacuolar fusion protein MON1
ruditapes2_c1234	protein transport	transport	P	Vacuolar fusion protein MON1
ruditapes2_c1234	transport	transport	P	Vacuolar fusion protein MON1
ruditapes_c6985	RNA splicing	RNA metabolism	P	"ATP-dependent RNA helicase MSS116, mitochondrial (EC 3.6.4.13)"
ruditapes_c8498	regulation of translation	protein metabolism	P	"ATP-dependent RNA helicase MSS116, mitochondrial (EC 3.6.4.13)"
ruditapes_c8498	mRNA processing	RNA metabolism	P	"ATP-dependent RNA helicase MSS116, mitochondrial (EC 3.6.4.13)"
ruditapes_c8498	RNA splicing	RNA metabolism	P	"ATP-dependent RNA helicase MSS116, mitochondrial (EC 3.6.4.13)"
ruditapes_c6985	mRNA processing	RNA metabolism	P	"ATP-dependent RNA helicase MSS116, mitochondrial (EC 3.6.4.13)"
ruditapes_c6985	regulation of translation	protein metabolism	P	"ATP-dependent RNA helicase MSS116, mitochondrial (EC 3.6.4.13)"
ruditapes_c13040	metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c13040	lipid catabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c13040	lipid metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c35139	negative regulation of DNA replication	DNA metabolism	P	Topoisomerase 1-associated factor 1
ruditapes_c35139	cell cycle	cell cycle and proliferation	P	Topoisomerase 1-associated factor 1
ruditapes_c35139	meiosis	cell cycle and proliferation	P	Topoisomerase 1-associated factor 1
ruditapes_c35139	DNA repair	stress response	P	Topoisomerase 1-associated factor 1
ruditapes_c35139	DNA repair	DNA metabolism	P	Topoisomerase 1-associated factor 1
ruditapes_c35139	response to DNA damage stimulus	stress response	P	Topoisomerase 1-associated factor 1
ruditapes_c14648	transport	transport	P	Autophagy-related protein 9
ruditapes2_c1041	protein transport	transport	P	Autophagy-related protein 9
ruditapes2_c1041	transport	transport	P	Autophagy-related protein 9
ruditapes_c14648	autophagy	other metabolic processes	P	Autophagy-related protein 9
ruditapes2_c1041	autophagy	other metabolic processes	P	Autophagy-related protein 9
ruditapes_c14648	protein transport	transport	P	Autophagy-related protein 9
ruditapes2_c2394	cellular process	other biological processes	P	Probable Xaa-Pro aminopeptidase SNOG
ruditapes2_c2394	proteolysis	protein metabolism	P	Probable Xaa-Pro aminopeptidase SNOG
ruditapes_c27564	transmembrane transport	transport	P	Calcium-binding mitochondrial carrier protein SCaMC-2 (Small calcium-binding mitochondrial carrier protein 2) (Solute carrier family 25 member 25)
ruditapes_c27564	transport	transport	P	Calcium-binding mitochondrial carrier protein SCaMC-2 (Small calcium-binding mitochondrial carrier protein 2) (Solute carrier family 25 member 25)
ruditapes_c15725	asparagine biosynthetic process	other metabolic processes	P	Asparagine synthetase domain-containing protein 1
ruditapes_c15725	glutamine metabolic process	other metabolic processes	P	Asparagine synthetase domain-containing protein 1
ruditapes_c15725	cellular amino acid biosynthetic process	other metabolic processes	P	Asparagine synthetase domain-containing protein 1
ruditapes_c9830	cell adhesion	cell adhesion	P	Contactin-associated protein like 5-3 (Cell recognition molecule Caspr5-3) (Cell recognition molecule Caspr5c) (Contactin-associated protein-like 5c)
ruditapes_c9830	signal transduction	signal transduction	P	Contactin-associated protein like 5-3 (Cell recognition molecule Caspr5-3) (Cell recognition molecule Caspr5c) (Contactin-associated protein-like 5c)
ruditapes_c21072	axonemal dynein complex assembly	cell organization and biogenesis	P	Coiled-coil domain-containing protein 39
ruditapes_c21072	ciliary cell motility	other biological processes	P	Coiled-coil domain-containing protein 39
ruditapes_c21072	flagellar cell motility	other biological processes	P	Coiled-coil domain-containing protein 39
ruditapes_c21072	cilium motion involved in determination of left/right asymmetry	developmental processes	P	Coiled-coil domain-containing protein 39
ruditapes_c3752	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Protein smg8 (Protein smg-8 homolog)
ruditapes_c3752	regulation of protein kinase activity	other metabolic processes	P	Protein smg8 (Protein smg-8 homolog)
ruditapes_c12300	chromatin modification	cell organization and biogenesis	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	"transcription, DNA-dependent"	RNA metabolism	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	histone deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	histone deubiquitination	cell organization and biogenesis	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	mitosis	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	cell cycle	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	mitosis	cell organization and biogenesis	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	cell division	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	protein homotetramerization	cell organization and biogenesis	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes_c12300	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)
ruditapes2_c5319	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 112 (Zfp-112)
ruditapes2_c5319	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 112 (Zfp-112)
ruditapes_c17439	keratinization	developmental processes	P	Cornifelin
ruditapes_lrc40100	peptidyl-lysine modification to hypusine	protein metabolism	P	Deoxyhypusine hydroxylase (DOHH) (EC 1.14.99.29) (Deoxyhypusine dioxygenase) (Deoxyhypusine monooxygenase)
ruditapes_lrc40100	oxidation reduction	other metabolic processes	P	Deoxyhypusine hydroxylase (DOHH) (EC 1.14.99.29) (Deoxyhypusine dioxygenase) (Deoxyhypusine monooxygenase)
ruditapes_c3860	carnitine biosynthetic process	other metabolic processes	P	"Trimethyllysine dioxygenase, mitochondrial (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML hydroxylase) (TML-alpha-ketoglutarate dioxygenase) (TML dioxygenase) (TMLD)"
ruditapes_c21159	negative regulation of oxidoreductase activity	other biological processes	P	"Trimethyllysine dioxygenase, mitochondrial (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML hydroxylase) (TML-alpha-ketoglutarate dioxygenase) (TML dioxygenase) (TMLD)"
ruditapes_c21159	carnitine biosynthetic process	other metabolic processes	P	"Trimethyllysine dioxygenase, mitochondrial (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML hydroxylase) (TML-alpha-ketoglutarate dioxygenase) (TML dioxygenase) (TMLD)"
ruditapes_c3860	oxidation reduction	other metabolic processes	P	"Trimethyllysine dioxygenase, mitochondrial (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML hydroxylase) (TML-alpha-ketoglutarate dioxygenase) (TML dioxygenase) (TMLD)"
ruditapes_c3860	negative regulation of oxidoreductase activity	other biological processes	P	"Trimethyllysine dioxygenase, mitochondrial (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML hydroxylase) (TML-alpha-ketoglutarate dioxygenase) (TML dioxygenase) (TMLD)"
ruditapes_c21159	oxidation reduction	other metabolic processes	P	"Trimethyllysine dioxygenase, mitochondrial (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML hydroxylase) (TML-alpha-ketoglutarate dioxygenase) (TML dioxygenase) (TMLD)"
ruditapes_c17762	metabolic process	other metabolic processes	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-)
ruditapes_c17762	defense response to virus	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-)
ruditapes_c17762	regulation of innate immune response	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-)
ruditapes_c17762	innate immune response	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-)
ruditapes_c17966	signal transduction	signal transduction	P	Ras-related and estrogen-regulated growth inhibitor
ruditapes_c17966	negative regulation of cell growth	other biological processes	P	Ras-related and estrogen-regulated growth inhibitor
ruditapes_c17966	response to hormone stimulus	other biological processes	P	Ras-related and estrogen-regulated growth inhibitor
ruditapes_c17966	GTP catabolic process	other metabolic processes	P	Ras-related and estrogen-regulated growth inhibitor
ruditapes_c17966	small GTPase mediated signal transduction	signal transduction	P	Ras-related and estrogen-regulated growth inhibitor
ruditapes_c17966	negative regulation of cell proliferation	cell cycle and proliferation	P	Ras-related and estrogen-regulated growth inhibitor
ruditapes_c7440	endocytosis	transport	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c7440	endocytosis	cell organization and biogenesis	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c7440	intracellular protein transport	transport	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c7440	transport	transport	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c7440	protein transport	transport	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c7440	clathrin coat assembly	transport	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c7440	clathrin coat assembly	cell organization and biogenesis	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c7440	vesicle-mediated transport	transport	P	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adapter-related protein complex 2 alpha-2 subunit) (Adaptor protein complex AP-2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)
ruditapes_c23902	negative regulation of peptidase activity	other biological processes	P	Inter-alpha-trypsin inhibitor heavy chain H1 (ITI heavy chain H1) (ITI-HC1) (Inter-alpha-inhibitor heavy chain 1)
ruditapes_c23902	hyaluronan metabolic process	other metabolic processes	P	Inter-alpha-trypsin inhibitor heavy chain H1 (ITI heavy chain H1) (ITI-HC1) (Inter-alpha-inhibitor heavy chain 1)
ruditapes_s36697	small GTPase mediated signal transduction	signal transduction	P	Intraflagellar transport protein 27 homolog (IFT27) (Putative GTP-binding protein RAY-like) (Rab-like protein 4)
ruditapes2_lrc3671	small GTPase mediated signal transduction	signal transduction	P	Intraflagellar transport protein 27 homolog (IFT27) (Putative GTP-binding protein RAY-like) (Rab-like protein 4)
ruditapes2_lrc3663	small GTPase mediated signal transduction	signal transduction	P	Intraflagellar transport protein 27 homolog (IFT27) (Putative GTP-binding protein RAY-like) (Rab-like protein 4)
ruditapes_c25708	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	"GTP:AMP phosphotransferase AK4, mitochondrial (EC 2.7.4.10) (Adenylate kinase 3-like) (Adenylate kinase isoenzyme 4) (AK 4)"
ruditapes_c25708	phosphorylation	other metabolic processes	P	"GTP:AMP phosphotransferase AK4, mitochondrial (EC 2.7.4.10) (Adenylate kinase 3-like) (Adenylate kinase isoenzyme 4) (AK 4)"
ruditapes_c25708	nucleotide phosphorylation	other metabolic processes	P	"GTP:AMP phosphotransferase AK4, mitochondrial (EC 2.7.4.10) (Adenylate kinase 3-like) (Adenylate kinase isoenzyme 4) (AK 4)"
ruditapes_c23262	proteolysis	protein metabolism	P	Collectrin (Transmembrane protein 27)
ruditapes_c22414	microtubule-based movement	other biological processes	P	"Dynein heavy chain 14, axonemal (Axonemal beta dynein heavy chain 14) (Ciliary dynein heavy chain 14)"
ruditapes_s36509	microtubule-based movement	other biological processes	P	"Dynein heavy chain 14, axonemal (Axonemal beta dynein heavy chain 14) (Ciliary dynein heavy chain 14)"
ruditapes_c28165	biological_process	other biological processes	P	Coiled-coil domain-containing protein 138
ruditapes_c16640	zygotic determination of dorsal/ventral axis	developmental processes	P	CXXC-type zinc finger protein 4
ruditapes_c16640	Wnt receptor signaling pathway	signal transduction	P	CXXC-type zinc finger protein 4
ruditapes_c13795	potassium ion transport	transport	P	BTB/POZ domain-containing protein KCTD7
ruditapes2_c124	potassium ion transport	transport	P	BTB/POZ domain-containing protein KCTD7
ruditapes_c31153	oxidation reduction	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c31153	metabolic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c31153	proline biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c31153	cellular amino acid biosynthetic process	other metabolic processes	P	Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)
ruditapes_c13367	dUTP metabolic process	other metabolic processes	P	Deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_c13367	nucleotide metabolic process	other metabolic processes	P	Deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_c13367	dUTP biosynthetic process	other metabolic processes	P	Deoxycytidine triphosphate deaminase (dCTP deaminase) (EC 3.5.4.13)
ruditapes_c9162	translation	protein metabolism	P	50S ribosomal protein L2
ruditapes_c19112	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c19112	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c19112	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c19112	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c2360	SRP-dependent cotranslational protein targeting to membrane	transport	P	Signal recognition particle 54 kDa protein (SRP54)
ruditapes2_c1537	proton transport	transport	P	V-type ATP synthase subunit E (V-ATPase subunit E)
ruditapes2_c1537	ATP biosynthetic process	other metabolic processes	P	V-type ATP synthase subunit E (V-ATPase subunit E)
ruditapes2_c1537	ion transport	transport	P	V-type ATP synthase subunit E (V-ATPase subunit E)
ruditapes2_c1537	ATP hydrolysis coupled proton transport	transport	P	V-type ATP synthase subunit E (V-ATPase subunit E)
ruditapes2_c1537	transport	transport	P	V-type ATP synthase subunit E (V-ATPase subunit E)
ruditapes_c17521	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes_c6770	translational elongation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_c6770	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_c6770	translation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_c22430	proteolysis	protein metabolism	P	Probable ubiquitin-like-specific protease 2A (EC 3.4.22.68)
ruditapes_c22430	protein desumoylation	protein metabolism	P	Probable ubiquitin-like-specific protease 2A (EC 3.4.22.68)
ruditapes_c31476	endocytosis	transport	P	Clathrin heavy chain 2
ruditapes_c31476	endocytosis	cell organization and biogenesis	P	Clathrin heavy chain 2
ruditapes_c31476	intracellular protein transport	transport	P	Clathrin heavy chain 2
ruditapes_c31476	vesicle-mediated transport	transport	P	Clathrin heavy chain 2
ruditapes_lrc23006	phosphoinositide-mediated signaling	signal transduction	P	Phosphatidylinositol 4-kinase 2 (PI4-kinase 2) (PtdIns-4-kinase 2) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta2) (PI-4Kbeta2)
ruditapes_lrc23006	phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-kinase 2 (PI4-kinase 2) (PtdIns-4-kinase 2) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta2) (PI-4Kbeta2)
ruditapes_lrc23006	pollen tube growth	developmental processes	P	Phosphatidylinositol 4-kinase 2 (PI4-kinase 2) (PtdIns-4-kinase 2) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta2) (PI-4Kbeta2)
ruditapes_lrc23006	multicellular organismal development	developmental processes	P	Phosphatidylinositol 4-kinase 2 (PI4-kinase 2) (PtdIns-4-kinase 2) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta2) (PI-4Kbeta2)
ruditapes_lrc23006	phosphoinositide phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-kinase 2 (PI4-kinase 2) (PtdIns-4-kinase 2) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta2) (PI-4Kbeta2)
ruditapes_lrc23006	root hair cell tip growth	developmental processes	P	Phosphatidylinositol 4-kinase 2 (PI4-kinase 2) (PtdIns-4-kinase 2) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta2) (PI-4Kbeta2)
ruditapes2_lrc5643	biological_process	other biological processes	P	Auxilin-related protein 2
ruditapes_c28508	response to abscisic acid stimulus	other biological processes	P	GPCR-type G protein 2
ruditapes_c28508	post-embryonic development	developmental processes	P	GPCR-type G protein 2
ruditapes_c28508	vegetative to reproductive phase transition	developmental processes	P	GPCR-type G protein 2
ruditapes_c9092	cell wall organization	cell organization and biogenesis	P	Cellulose synthase-like protein B5 (AtCslB5) (EC 2.4.1.-)
ruditapes_c9092	root hair elongation	developmental processes	P	Cellulose synthase-like protein B5 (AtCslB5) (EC 2.4.1.-)
ruditapes_c9092	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase-like protein B5 (AtCslB5) (EC 2.4.1.-)
ruditapes2_c2129	protein folding	protein metabolism	P	Chaperone protein dnaJ 72 (AtDjC72) (AtJ72)
ruditapes_c8930	transport	transport	P	"D-xylose-proton symporter-like 3, chloroplastic"
ruditapes_c8930	transmembrane transport	transport	P	"D-xylose-proton symporter-like 3, chloroplastic"
ruditapes_c8930	carbohydrate transport	transport	P	"D-xylose-proton symporter-like 3, chloroplastic"
ruditapes_lrc33397	nervous system development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_c33353	cell differentiation	other biological processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_c33353	neuron migration	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc33089	neuron migration	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc33397	cell differentiation	other biological processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc33089	nervous system development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_c33353	nervous system development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc33397	neuron migration	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_c33353	multicellular organismal development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc33089	cell differentiation	other biological processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc33397	multicellular organismal development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc33089	multicellular organismal development	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 1
ruditapes_lrc33033	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes2_lrc4457	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_lrc34022	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes2_lrc7009	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_lrc39803	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_c5383	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit J (eIF3j)
ruditapes_c5383	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit J (eIF3j)
ruditapes_lrc7499	ion transport	transport	P	Degenerin-like protein T28D9.7
ruditapes_lrc7499	sodium ion transport	transport	P	Degenerin-like protein T28D9.7
ruditapes_lrc7499	transport	transport	P	Degenerin-like protein T28D9.7
ruditapes2_c1648	inactivation of MAPK activity	signal transduction	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	inactivation of MAPK activity	other metabolic processes	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	defense response	stress response	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	positive regulation of growth rate	other biological processes	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	growth	other biological processes	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	protein amino acid dephosphorylation	protein metabolism	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	negative regulation of JNK cascade	stress response	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	nematode larval development	developmental processes	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	response to copper ion	other biological processes	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	positive regulation of locomotion	other biological processes	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	embryonic development ending in birth or egg hatching	developmental processes	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	dephosphorylation	other metabolic processes	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	morphogenesis of an epithelium	developmental processes	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes2_c1648	negative regulation of JNK cascade	signal transduction	P	Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1)
ruditapes_c561	proteolysis	protein metabolism	P	Uncharacterized protein C3H1.02c
ruditapes_c15743	biological_process	other biological processes	P	"Uncharacterized CCDC90 family protein C3H1.08c, mitochondrial"
ruditapes_c10711	transmembrane transport	transport	P	Uncharacterized transporter mfs2
ruditapes_c10711	cellular response to stress	stress response	P	Uncharacterized transporter mfs2
ruditapes_c10711	transport	transport	P	Uncharacterized transporter mfs2
ruditapes_c17213	cellular response to stress	stress response	P	Putative agmatinase 1 (EC 3.5.3.11) (Agmatine ureohydrolase 1) (AUH 1)
ruditapes2_c1085	biological_process	other biological processes	P	Uncharacterized protein C11D3.14c
ruditapes2_c1085	metabolic process	other metabolic processes	P	Uncharacterized protein C11D3.14c
ruditapes_c11534	RNA-dependent DNA replication	DNA metabolism	P	Putative uncharacterized transposon-derived protein F52C9.6
ruditapes_c22947	RNA-dependent DNA replication	DNA metabolism	P	Putative uncharacterized transposon-derived protein F52C9.6
ruditapes2_c981	oxidation reduction	other metabolic processes	P	Uncharacterized oxidoreductase dhs-5 (EC 1.-.-.-) (Short-chain dehydrogenase 5)
ruditapes2_c981	metabolic process	other metabolic processes	P	Uncharacterized oxidoreductase dhs-5 (EC 1.-.-.-) (Short-chain dehydrogenase 5)
ruditapes_c28410	small GTPase mediated signal transduction	signal transduction	P	Uncharacterized protein C17D1.07c
ruditapes_c18426	cellular response to stress	stress response	P	MEMO1 family protein C4H3.04c
ruditapes_c8998	cellular response to oxidative stress	stress response	P	F-box protein pof14
ruditapes_c8998	regulation of ergosterol biosynthetic process	other metabolic processes	P	F-box protein pof14
ruditapes_c8998	response to oxidative stress	stress response	P	F-box protein pof14
ruditapes_c8998	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	F-box protein pof14
ruditapes_c14923	transcription from RNA polymerase III promoter	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit 2) (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 130 kDa polypeptide) (RPC130)
ruditapes_c14923	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit 2) (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 130 kDa polypeptide) (RPC130)
ruditapes_c7166	mRNA cleavage	RNA metabolism	P	Uncharacterized protein C4G9.04c
ruditapes_c7166	termination of RNA polymerase II transcription	RNA metabolism	P	Uncharacterized protein C4G9.04c
ruditapes_c7166	termination of RNA polymerase II transcription	cell organization and biogenesis	P	Uncharacterized protein C4G9.04c
ruditapes_c7166	mRNA polyadenylation	RNA metabolism	P	Uncharacterized protein C4G9.04c
ruditapes_c14469	biological_process	other biological processes	P	Uncharacterized protein C56F8.02
ruditapes_c14469	metabolic process	other metabolic processes	P	Uncharacterized protein C56F8.02
ruditapes2_c4945	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Nonsense-mediated mRNA decay protein 3 (Up-frameshift suppressor 3)
ruditapes_c4163	citrate metabolic process	other metabolic processes	P	"Probable citrate synthase, mitochondrial (EC 2.3.3.1)"
ruditapes_c4163	cellular carbohydrate metabolic process	other metabolic processes	P	"Probable citrate synthase, mitochondrial (EC 2.3.3.1)"
ruditapes_c4163	glutamate biosynthetic process	other metabolic processes	P	"Probable citrate synthase, mitochondrial (EC 2.3.3.1)"
ruditapes_c4163	tricarboxylic acid cycle	other metabolic processes	P	"Probable citrate synthase, mitochondrial (EC 2.3.3.1)"
ruditapes_c4163	cellular carbohydrate catabolic process	other metabolic processes	P	"Probable citrate synthase, mitochondrial (EC 2.3.3.1)"
ruditapes_c25383	endocytosed protein transport to vacuole	transport	P	Inositol phosphoceramide mannosyltransferase 3 (EC 2.4.-.-) (IPC mannosyltransferase 3)
ruditapes_c25383	endocytosis	transport	P	Inositol phosphoceramide mannosyltransferase 3 (EC 2.4.-.-) (IPC mannosyltransferase 3)
ruditapes_c25383	endocytosis	cell organization and biogenesis	P	Inositol phosphoceramide mannosyltransferase 3 (EC 2.4.-.-) (IPC mannosyltransferase 3)
ruditapes_c18406	extracellular polysaccharide metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase C11E10.09c (EC 3.2.1.-)
ruditapes_c18406	metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase C11E10.09c (EC 3.2.1.-)
ruditapes_c7883	metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase C11E10.09c (EC 3.2.1.-)
ruditapes_c7883	extracellular polysaccharide metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase C11E10.09c (EC 3.2.1.-)
ruditapes_c18406	cellular polysaccharide catabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase C11E10.09c (EC 3.2.1.-)
ruditapes_c18406	carbohydrate metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase C11E10.09c (EC 3.2.1.-)
ruditapes_c7883	carbohydrate metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase C11E10.09c (EC 3.2.1.-)
ruditapes_c7883	cellular polysaccharide catabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase C11E10.09c (EC 3.2.1.-)
ruditapes_c18406	carbohydrate catabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase C11E10.09c (EC 3.2.1.-)
ruditapes_c7883	carbohydrate catabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase C11E10.09c (EC 3.2.1.-)
ruditapes_c27735	protein ubiquitination	protein metabolism	P	Probable ubiquitin fusion degradation protein C12B10.01c
ruditapes_c27735	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	Probable ubiquitin fusion degradation protein C12B10.01c
ruditapes_c27735	protein modification process	protein metabolism	P	Probable ubiquitin fusion degradation protein C12B10.01c
ruditapes_c5156	S-adenosylmethionine transport	transport	P	Uncharacterized mitochondrial carrier C12B10.09
ruditapes_c5156	transport	transport	P	Uncharacterized mitochondrial carrier C12B10.09
ruditapes_lrc28060	biological_process	other biological processes	P	"Pentatricopeptide repeat-containing protein 5, mitochondrial"
ruditapes_c30533	intracellular protein transport	transport	P	Arf guanine nucleotide exchange factor sec74
ruditapes_c30533	exocytosis	transport	P	Arf guanine nucleotide exchange factor sec74
ruditapes_c30533	vesicle-mediated transport	transport	P	Arf guanine nucleotide exchange factor sec74
ruditapes_c30533	regulation of ARF protein signal transduction	signal transduction	P	Arf guanine nucleotide exchange factor sec74
ruditapes_c21838	biological_process	other biological processes	P	Uncharacterized protein C26F1.08c
ruditapes_c21838	response to aluminum ion	other biological processes	P	Uncharacterized protein C26F1.08c
ruditapes_lrc19897	glycolysis	other metabolic processes	P	Pyruvate dehydrogenase E1 component (PDH E1 component) (EC 1.2.4.1)
ruditapes_lrc19897	oxidation reduction	other metabolic processes	P	Pyruvate dehydrogenase E1 component (PDH E1 component) (EC 1.2.4.1)
ruditapes_lrc19897	metabolic process	other metabolic processes	P	Pyruvate dehydrogenase E1 component (PDH E1 component) (EC 1.2.4.1)
ruditapes_c25427	mRNA polyadenylation	RNA metabolism	P	Cleavage and polyadenylation specificity factor subunit 1 (Cleavage and polyadenylation specificity factor 160 kDa subunit) (CPSF 160 kDa subunit)
ruditapes_c25427	mRNA cleavage	RNA metabolism	P	Cleavage and polyadenylation specificity factor subunit 1 (Cleavage and polyadenylation specificity factor 160 kDa subunit) (CPSF 160 kDa subunit)
ruditapes_c25427	mRNA processing	RNA metabolism	P	Cleavage and polyadenylation specificity factor subunit 1 (Cleavage and polyadenylation specificity factor 160 kDa subunit) (CPSF 160 kDa subunit)
ruditapes_c24507	metabolic process	other metabolic processes	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes_c24507	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes_c24507	base-excision repair	stress response	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes_c24507	base-excision repair	DNA metabolism	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes_c24507	response to nitrosative stress	stress response	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes_c24507	DNA dealkylation	stress response	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes_c24507	DNA dealkylation	DNA metabolism	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes_c24507	methylation	other metabolic processes	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes_c24507	DNA repair	stress response	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes_c24507	DNA repair	DNA metabolism	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes_c24507	response to DNA damage stimulus	stress response	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes_c24507	"transcription, DNA-dependent"	RNA metabolism	P	Probable bifunctional transcriptional activator/DNA repair enzyme AlkA (Regulatory protein AlkA) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); DNA-3-methyladenine glycosylase (EC 3.2.2.21) (DNA-3-methyladenine glycosidase)]
ruditapes2_c1160	metamorphosis	other biological processes	P	Angiotensin-converting enzyme (EC 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II)
ruditapes2_c1160	sperm individualization	developmental processes	P	Angiotensin-converting enzyme (EC 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II)
ruditapes2_c1160	proteolysis	protein metabolism	P	Angiotensin-converting enzyme (EC 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II)
ruditapes2_c1160	response to symbiotic bacterium	other biological processes	P	Angiotensin-converting enzyme (EC 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II)
ruditapes2_c1160	spermatid nucleus differentiation	cell organization and biogenesis	P	Angiotensin-converting enzyme (EC 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II)
ruditapes_c28070	membrane protein ectodomain proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	monocyte activation	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	negative regulation of cell adhesion	cell adhesion	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	response to tumor necrosis factor	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	in utero embryonic development	developmental processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	positive regulation of cell proliferation	cell cycle and proliferation	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	protein amino acid phosphorylation	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	negative regulation of cell adhesion	cell adhesion	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	positive regulation of T cell chemotaxis	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	PMA-inducible membrane protein ectodomain proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	in utero embryonic development	developmental processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	positive regulation of cell proliferation	cell cycle and proliferation	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	positive regulation of cell growth	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	Notch signaling pathway	signal transduction	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	positive regulation of cell growth	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	protein amino acid phosphorylation	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	membrane protein ectodomain proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	monocyte activation	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	constitutive protein ectodomain proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	positive regulation of cell migration	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	PMA-inducible membrane protein ectodomain proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	response to tumor necrosis factor	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	positive regulation of cell migration	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	Notch signaling pathway	signal transduction	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c1613	positive regulation of T cell chemotaxis	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes_c28070	constitutive protein ectodomain proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (Myelin-associated metalloproteinase) (CD antigen CD156c)
ruditapes2_c2018	proteolysis	protein metabolism	P	Aminopeptidase C (EC 3.4.22.40) (Bleomycin hydrolase)
ruditapes_c26087	metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase Rv2006/MT2062 (EC 3.2.1.-)
ruditapes_c26087	carbohydrate metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase Rv2006/MT2062 (EC 3.2.1.-)
ruditapes_c26087	trehalose biosynthetic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase Rv2006/MT2062 (EC 3.2.1.-)
ruditapes_c22391	dicarboxylic acid transport	transport	P	Excitatory amino acid transporter (Sodium-dependent glutamate/ aspartate transporter)
ruditapes_c22391	L-glutamate transport	transport	P	Excitatory amino acid transporter (Sodium-dependent glutamate/ aspartate transporter)
ruditapes_c22391	transport	transport	P	Excitatory amino acid transporter (Sodium-dependent glutamate/ aspartate transporter)
ruditapes_c23815	sensory perception of chemical stimulus	other biological processes	P	Serpentine receptor class alpha-34 (Protein sra-34)
ruditapes_c29796	embryonic body morphogenesis	developmental processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	regulation of protein localization	other biological processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	positive regulation of protein kinase activity	other metabolic processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	asymmetric protein localization involved in cell fate determination	other biological processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	polarity specification of proximal/distal axis	developmental processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	regulation of embryonic development	developmental processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	reproduction	other biological processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	mitotic spindle organization	cell cycle and proliferation	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	mitotic spindle organization	cell organization and biogenesis	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	negative regulation of transcription factor activity	RNA metabolism	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	embryonic development ending in birth or egg hatching	developmental processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	"transcription, DNA-dependent"	RNA metabolism	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	endoderm development	developmental processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	Wnt receptor signaling pathway	signal transduction	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	multicellular organismal development	developmental processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c29796	endodermal cell fate specification	other biological processes	P	Armadillo repeat-containing protein wrm-1 (Worm armadillo protein 1)
ruditapes_c24034	protein amino acid glycosylation	protein metabolism	P	"Galactoside 2-alpha-L-fucosyltransferase 2 (EC 2.4.1.69) (Alpha 1,2-fucosyltransferase) (Alpha 1,2-fucosyltransferase B) (Alpha 1-2 fucosyltransferase) (Alpha(1,2)FT 2) (Fucosyltransferase 2) (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 2) (Secretor blood group alpha-2-fucosyltransferase)"
ruditapes_c24034	carbohydrate metabolic process	other metabolic processes	P	"Galactoside 2-alpha-L-fucosyltransferase 2 (EC 2.4.1.69) (Alpha 1,2-fucosyltransferase) (Alpha 1,2-fucosyltransferase B) (Alpha 1-2 fucosyltransferase) (Alpha(1,2)FT 2) (Fucosyltransferase 2) (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 2) (Secretor blood group alpha-2-fucosyltransferase)"
ruditapes_c1267	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain]
ruditapes_c1073	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain]
ruditapes2_c633	pollen development	developmental processes	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	cell proliferation	cell cycle and proliferation	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	positive regulation of cell cycle	cell cycle and proliferation	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	chromatin modification	cell organization and biogenesis	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	seed coat development	other biological processes	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	trichome differentiation	developmental processes	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	heterochromatin formation	cell organization and biogenesis	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	genetic imprinting	other metabolic processes	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	multicellular organismal development	developmental processes	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	embryonic development ending in seed dormancy	developmental processes	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	regulation of flower development	developmental processes	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	seed development	other biological processes	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes2_c633	leaf development	developmental processes	P	Histone-binding protein MSI1 homolog (CAF-1 p48 homolog) (Chromatin assembly factor 1 subunit MSI1 homolog) (CAF-1 subunit MSI1 homolog) (WD-40 repeat-containing protein MSI1 homolog)
ruditapes_c31473	RNA processing	RNA metabolism	P	Endoribonuclease Dicer homolog 2a (Dicer-like protein 2a) (OsDCL2a) (EC 3.1.26.-)
ruditapes_c31473	gene silencing by RNA	other metabolic processes	P	Endoribonuclease Dicer homolog 2a (Dicer-like protein 2a) (OsDCL2a) (EC 3.1.26.-)
ruditapes_c13245	mRNA processing	RNA metabolism	P	Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (CBP80) (NCBP 80 kDa subunit)
ruditapes_c13245	RNA splicing	RNA metabolism	P	Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (CBP80) (NCBP 80 kDa subunit)
ruditapes_c13245	mRNA capping	RNA metabolism	P	Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (CBP80) (NCBP 80 kDa subunit)
ruditapes_c13245	RNA metabolic process	RNA metabolism	P	Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (CBP80) (NCBP 80 kDa subunit)
ruditapes_c13245	gene silencing by RNA	other metabolic processes	P	Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (CBP80) (NCBP 80 kDa subunit)
ruditapes_lrc37876	defense response	stress response	P	Cysteine proteinase inhibitor 6 (Oryzacystatin VI) (OC-VI) (Oryzacystatin-6)
ruditapes_lrc37876	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 6 (Oryzacystatin VI) (OC-VI) (Oryzacystatin-6)
ruditapes_lrc19701	negative regulation of peptidase activity	other biological processes	P	Putative cysteine proteinase inhibitor 7 (Oryzacystatin VII) (OC-VII) (Oryzacystatin-7)
ruditapes2_lrc2707	negative regulation of peptidase activity	other biological processes	P	Putative cysteine proteinase inhibitor 7 (Oryzacystatin VII) (OC-VII) (Oryzacystatin-7)
ruditapes2_lrc4197	negative regulation of peptidase activity	other biological processes	P	Putative cysteine proteinase inhibitor 7 (Oryzacystatin VII) (OC-VII) (Oryzacystatin-7)
ruditapes2_lrc2707	defense response	stress response	P	Putative cysteine proteinase inhibitor 7 (Oryzacystatin VII) (OC-VII) (Oryzacystatin-7)
ruditapes2_lrc4197	defense response	stress response	P	Putative cysteine proteinase inhibitor 7 (Oryzacystatin VII) (OC-VII) (Oryzacystatin-7)
ruditapes_lrc19701	defense response	stress response	P	Putative cysteine proteinase inhibitor 7 (Oryzacystatin VII) (OC-VII) (Oryzacystatin-7)
ruditapes_c26322	biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c26322	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c26322	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c27658	phytochromobilin biosynthetic process	other metabolic processes	P	Phycocyanobilin:ferredoxin oxidoreductase (EC 1.3.7.5)
ruditapes_c27658	oxidation reduction	other metabolic processes	P	Phycocyanobilin:ferredoxin oxidoreductase (EC 1.3.7.5)
ruditapes_c4821	transport	transport	P	NAD(P)H-quinone oxidoreductase subunit N (EC 1.6.5.-) (NAD(P)H dehydrogenase I subunit N) (NDH-1 subunit N) (NDH-N)
ruditapes_c4821	oxidation reduction	other metabolic processes	P	NAD(P)H-quinone oxidoreductase subunit N (EC 1.6.5.-) (NAD(P)H dehydrogenase I subunit N) (NDH-1 subunit N) (NDH-N)
ruditapes_c25009	translational termination	protein metabolism	P	Peptide chain release factor 1 (RF-1)
ruditapes_c25009	translational termination	cell organization and biogenesis	P	Peptide chain release factor 1 (RF-1)
ruditapes_c25009	translation	protein metabolism	P	Peptide chain release factor 1 (RF-1)
ruditapes_lrc35390	regulation of Rho protein signal transduction	signal transduction	P	Putative protein tag-52
ruditapes_c5747	regulation of Rho protein signal transduction	signal transduction	P	Putative protein tag-52
ruditapes_c19042	positive regulation of telomere maintenance via telomerase	DNA metabolism	P	Protein wos2 (p21)
ruditapes_c19042	positive regulation of telomere maintenance via telomerase	cell organization and biogenesis	P	Protein wos2 (p21)
ruditapes2_c521	protein folding	protein metabolism	P	Protein wos2 (p21)
ruditapes_c19042	protein folding	protein metabolism	P	Protein wos2 (p21)
ruditapes2_c521	cell cycle	cell cycle and proliferation	P	Protein wos2 (p21)
ruditapes_c19042	regulation of mitotic cell cycle	cell cycle and proliferation	P	Protein wos2 (p21)
ruditapes_c19042	cell cycle	cell cycle and proliferation	P	Protein wos2 (p21)
ruditapes2_c521	positive regulation of telomere maintenance via telomerase	DNA metabolism	P	Protein wos2 (p21)
ruditapes2_c521	positive regulation of telomere maintenance via telomerase	cell organization and biogenesis	P	Protein wos2 (p21)
ruditapes2_c521	regulation of mitotic cell cycle	cell cycle and proliferation	P	Protein wos2 (p21)
ruditapes_s36532	cell adhesion	cell adhesion	P	Uncharacterized protein C03F11.3
ruditapes_lrc28964	oxidation reduction	other metabolic processes	P	Uncharacterized GMC-type oxidoreductase Rv0492c/MT0511/MT0512 (EC 1.1.-.-)
ruditapes_c14629	positive regulation of growth rate	other biological processes	P	Actin-interacting protein 1 (AIP1) (Uncoordinated protein 78)
ruditapes_c14629	reproduction	other biological processes	P	Actin-interacting protein 1 (AIP1) (Uncoordinated protein 78)
ruditapes_c14629	locomotion	other biological processes	P	Actin-interacting protein 1 (AIP1) (Uncoordinated protein 78)
ruditapes_c14629	negative regulation of actin filament polymerization	protein metabolism	P	Actin-interacting protein 1 (AIP1) (Uncoordinated protein 78)
ruditapes_c14629	nematode larval development	developmental processes	P	Actin-interacting protein 1 (AIP1) (Uncoordinated protein 78)
ruditapes_c14629	negative regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-interacting protein 1 (AIP1) (Uncoordinated protein 78)
ruditapes_c14629	positive regulation of actin filament depolymerization	protein metabolism	P	Actin-interacting protein 1 (AIP1) (Uncoordinated protein 78)
ruditapes_c14629	positive regulation of actin filament depolymerization	cell organization and biogenesis	P	Actin-interacting protein 1 (AIP1) (Uncoordinated protein 78)
ruditapes_c14629	oviposition	other biological processes	P	Actin-interacting protein 1 (AIP1) (Uncoordinated protein 78)
ruditapes_c14629	positive regulation of locomotion	other biological processes	P	Actin-interacting protein 1 (AIP1) (Uncoordinated protein 78)
ruditapes_lrc39498	nematode larval development	developmental processes	P	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase) (Lethal protein 721)"
ruditapes_lrc39498	body morphogenesis	other biological processes	P	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase) (Lethal protein 721)"
ruditapes_lrc39498	embryonic development ending in birth or egg hatching	developmental processes	P	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase) (Lethal protein 721)"
ruditapes_lrc39498	electron transport chain	other metabolic processes	P	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase) (Lethal protein 721)"
ruditapes_lrc39498	oxidation reduction	other metabolic processes	P	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase) (Lethal protein 721)"
ruditapes_lrc39498	positive regulation of growth rate	other biological processes	P	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase) (Lethal protein 721)"
ruditapes_lrc39498	transport	transport	P	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase) (Lethal protein 721)"
ruditapes_c31667	protein amino acid ADP-ribosylation	protein metabolism	P	Poly [ADP-ribose] polymerase (PARP) (EC 2.4.2.30) (NAD(+) ADP-ribosyltransferase) (ADPRT) (Poly[ADP-ribose] synthase)
ruditapes2_c6731	nucleotide-excision repair	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes2_c6731	nucleotide-excision repair	DNA metabolism	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes2_c6731	DNA repair	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes2_c6731	DNA repair	DNA metabolism	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes2_c6731	response to DNA damage stimulus	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes2_c6731	metabolic process	other metabolic processes	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes2_c6731	base-excision repair	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes2_c6731	base-excision repair	DNA metabolism	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c18598	nitrogen compound metabolic process	other metabolic processes	P	Urease accessory protein UreD
ruditapes2_lrc3845	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc32791	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc4776	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc3762	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc32791	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc3845	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c2673	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc3762	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc4155	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc3845	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc32791	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc3845	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc4155	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc4776	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc4155	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc3762	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc4776	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c2673	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc4776	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc4155	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_lrc3762	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc32791	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c2673	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c2673	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_s37580	biopolymer modification	other metabolic processes	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_s37580	peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid	protein metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_s37580	RNA modification	RNA metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c23852	ribosomal large subunit assembly	cell organization and biogenesis	P	Midasin (MIDAS-containing protein) (Ribosome export/assembly protein 1)
ruditapes_c23852	rRNA processing	RNA metabolism	P	Midasin (MIDAS-containing protein) (Ribosome export/assembly protein 1)
ruditapes_c23852	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Midasin (MIDAS-containing protein) (Ribosome export/assembly protein 1)
ruditapes_c23852	ATP catabolic process	other metabolic processes	P	Midasin (MIDAS-containing protein) (Ribosome export/assembly protein 1)
ruditapes_c23852	protein complex assembly	cell organization and biogenesis	P	Midasin (MIDAS-containing protein) (Ribosome export/assembly protein 1)
ruditapes_lrc24300	DNA repair	stress response	P	Radiation-sensitive protein 28
ruditapes_lrc24300	DNA repair	DNA metabolism	P	Radiation-sensitive protein 28
ruditapes_lrc24300	response to DNA damage stimulus	stress response	P	Radiation-sensitive protein 28
ruditapes_c30375	protein processing	protein metabolism	P	pH-response regulator protein palA/RIM20 (Regulator of IME2 protein 20)
ruditapes_c30375	proteolysis	protein metabolism	P	pH-response regulator protein palA/RIM20 (Regulator of IME2 protein 20)
ruditapes_c30375	invasive growth in response to glucose limitation	other biological processes	P	pH-response regulator protein palA/RIM20 (Regulator of IME2 protein 20)
ruditapes_c30375	response to pH	other biological processes	P	pH-response regulator protein palA/RIM20 (Regulator of IME2 protein 20)
ruditapes_c30375	sporulation resulting in formation of a cellular spore	other biological processes	P	pH-response regulator protein palA/RIM20 (Regulator of IME2 protein 20)
ruditapes_c30143	ribosomal small subunit export from nucleus	transport	P	Adenylate kinase isoenzyme 6 homolog FAP7 (AK6) (EC 2.7.4.3) (Dual activity adenylate kinase/ATPase) (AK/ATPase) (POS9-activating factor 7)
ruditapes_c30143	phosphorylation	other metabolic processes	P	Adenylate kinase isoenzyme 6 homolog FAP7 (AK6) (EC 2.7.4.3) (Dual activity adenylate kinase/ATPase) (AK/ATPase) (POS9-activating factor 7)
ruditapes_c30143	rRNA processing	RNA metabolism	P	Adenylate kinase isoenzyme 6 homolog FAP7 (AK6) (EC 2.7.4.3) (Dual activity adenylate kinase/ATPase) (AK/ATPase) (POS9-activating factor 7)
ruditapes_c30143	"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	Adenylate kinase isoenzyme 6 homolog FAP7 (AK6) (EC 2.7.4.3) (Dual activity adenylate kinase/ATPase) (AK/ATPase) (POS9-activating factor 7)
ruditapes_c30143	"transcription, DNA-dependent"	RNA metabolism	P	Adenylate kinase isoenzyme 6 homolog FAP7 (AK6) (EC 2.7.4.3) (Dual activity adenylate kinase/ATPase) (AK/ATPase) (POS9-activating factor 7)
ruditapes_c30143	cellular response to oxidative stress	stress response	P	Adenylate kinase isoenzyme 6 homolog FAP7 (AK6) (EC 2.7.4.3) (Dual activity adenylate kinase/ATPase) (AK/ATPase) (POS9-activating factor 7)
ruditapes_c30143	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Adenylate kinase isoenzyme 6 homolog FAP7 (AK6) (EC 2.7.4.3) (Dual activity adenylate kinase/ATPase) (AK/ATPase) (POS9-activating factor 7)
ruditapes_c30143	ribosome biogenesis	other biological processes	P	Adenylate kinase isoenzyme 6 homolog FAP7 (AK6) (EC 2.7.4.3) (Dual activity adenylate kinase/ATPase) (AK/ATPase) (POS9-activating factor 7)
ruditapes_c12302	tRNA processing	RNA metabolism	P	"tRNA pseudouridine(32) synthase, mitochondrial (EC 5.4.99.28) (tRNA pseudouridine synthase 9) (tRNA pseudouridylate synthase 9) (tRNA-uridine isomerase 9)"
ruditapes_c12302	tRNA pseudouridine synthesis	RNA metabolism	P	"tRNA pseudouridine(32) synthase, mitochondrial (EC 5.4.99.28) (tRNA pseudouridine synthase 9) (tRNA pseudouridylate synthase 9) (tRNA-uridine isomerase 9)"
ruditapes_c12302	pseudouridine synthesis	RNA metabolism	P	"tRNA pseudouridine(32) synthase, mitochondrial (EC 5.4.99.28) (tRNA pseudouridine synthase 9) (tRNA pseudouridylate synthase 9) (tRNA-uridine isomerase 9)"
ruditapes_c12302	RNA modification	RNA metabolism	P	"tRNA pseudouridine(32) synthase, mitochondrial (EC 5.4.99.28) (tRNA pseudouridine synthase 9) (tRNA pseudouridylate synthase 9) (tRNA-uridine isomerase 9)"
ruditapes_c30769	cellular iron ion homeostasis	other biological processes	P	Iron transporter SMF3
ruditapes_c30769	iron ion homeostasis	other biological processes	P	Iron transporter SMF3
ruditapes_c30769	ion transport	transport	P	Iron transporter SMF3
ruditapes_c30769	iron ion transport	transport	P	Iron transporter SMF3
ruditapes_c30769	transport	transport	P	Iron transporter SMF3
ruditapes2_lrc5537	fermentation	other metabolic processes	P	Protein CSF1 (Cold sensitive for fermentation protein 1)
ruditapes_c21573	fermentation	other metabolic processes	P	Protein CSF1 (Cold sensitive for fermentation protein 1)
ruditapes_c16113	nuclear pore organization	cell organization and biogenesis	P	Pore membrane protein of 33 kDa
ruditapes2_c2434	protein transport	transport	P	Pore membrane protein of 33 kDa
ruditapes2_c2434	transport	transport	P	Pore membrane protein of 33 kDa
ruditapes_c16113	mRNA transport	transport	P	Pore membrane protein of 33 kDa
ruditapes_c16113	protein transport	transport	P	Pore membrane protein of 33 kDa
ruditapes2_c2434	nuclear pore organization	cell organization and biogenesis	P	Pore membrane protein of 33 kDa
ruditapes_c16113	transport	transport	P	Pore membrane protein of 33 kDa
ruditapes2_c2434	mRNA transport	transport	P	Pore membrane protein of 33 kDa
ruditapes2_c2822	ascospore wall assembly	cell organization and biogenesis	P	Outer spore wall protein 2
ruditapes2_c2822	sporulation resulting in formation of a cellular spore	other biological processes	P	Outer spore wall protein 2
ruditapes_c8595	lipid catabolic process	other metabolic processes	P	"Probable phospholipase YOR022C, mitochondrial (EC 3.1.1.-)"
ruditapes_c17195	lipid catabolic process	other metabolic processes	P	"Probable phospholipase YOR022C, mitochondrial (EC 3.1.1.-)"
ruditapes_c17195	biological_process	other biological processes	P	"Probable phospholipase YOR022C, mitochondrial (EC 3.1.1.-)"
ruditapes_c8595	biological_process	other biological processes	P	"Probable phospholipase YOR022C, mitochondrial (EC 3.1.1.-)"
ruditapes_c13168	biological_process	other biological processes	P	UBX domain-containing protein 3
ruditapes_c20861	transmembrane transport	transport	P	High affinity cysteine transporter
ruditapes_c20861	amino acid transport	transport	P	High affinity cysteine transporter
ruditapes_c20861	cysteine transport	transport	P	High affinity cysteine transporter
ruditapes_c20861	transport	transport	P	High affinity cysteine transporter
ruditapes_c18824	spermine transport	transport	P	Polyamine transporter 4
ruditapes_c18824	transmembrane transport	transport	P	Polyamine transporter 4
ruditapes_c18824	transport	transport	P	Polyamine transporter 4
ruditapes_c18824	spermidine transport	transport	P	Polyamine transporter 4
ruditapes_c18815	sulfate transport	transport	P	Sulfate permease 2 (High-affinity sulfate transporter 2)
ruditapes_c18815	transmembrane transport	transport	P	Sulfate permease 2 (High-affinity sulfate transporter 2)
ruditapes_c18815	transport	transport	P	Sulfate permease 2 (High-affinity sulfate transporter 2)
ruditapes_c22243	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Zinc finger transcription factor YRM1 (Reveromycin resistance modulator 1)
ruditapes_c22243	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger transcription factor YRM1 (Reveromycin resistance modulator 1)
ruditapes_c22243	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger transcription factor YRM1 (Reveromycin resistance modulator 1)
ruditapes_c8342	chromosome segregation	other biological processes	P	Autophagy-related protein 31 (CIK1 suppressor protein 1) (Protein CIS1)
ruditapes_c8342	transport	transport	P	Autophagy-related protein 31 (CIK1 suppressor protein 1) (Protein CIS1)
ruditapes_c8342	piecemeal microautophagy of nucleus	other metabolic processes	P	Autophagy-related protein 31 (CIK1 suppressor protein 1) (Protein CIS1)
ruditapes_c8342	piecemeal microautophagy of nucleus	cell organization and biogenesis	P	Autophagy-related protein 31 (CIK1 suppressor protein 1) (Protein CIS1)
ruditapes_c8342	karyogamy	cell organization and biogenesis	P	Autophagy-related protein 31 (CIK1 suppressor protein 1) (Protein CIS1)
ruditapes_c8342	protein transport	transport	P	Autophagy-related protein 31 (CIK1 suppressor protein 1) (Protein CIS1)
ruditapes_c8342	autophagy	other metabolic processes	P	Autophagy-related protein 31 (CIK1 suppressor protein 1) (Protein CIS1)
ruditapes_c8342	mitochondrion degradation	other metabolic processes	P	Autophagy-related protein 31 (CIK1 suppressor protein 1) (Protein CIS1)
ruditapes_c9317	tRNA export from nucleus	transport	P	Cytoplasmic export protein 1
ruditapes_c26762	pantothenate biosynthetic process	other metabolic processes	P	Spermine synthase (SPMSY) (EC 2.5.1.22) (Spermidine aminopropyltransferase)
ruditapes_c26762	spermine biosynthetic process	other metabolic processes	P	Spermine synthase (SPMSY) (EC 2.5.1.22) (Spermidine aminopropyltransferase)
ruditapes_c26762	metabolic process	other metabolic processes	P	Spermine synthase (SPMSY) (EC 2.5.1.22) (Spermidine aminopropyltransferase)
ruditapes_c23352	biological_process	other biological processes	P	Tricalbin-1
ruditapes_c19462	protein targeting to vacuole	transport	P	Vacuolar-sorting protein SNF8 (ESCRT-II complex subunit VPS22) (Vacuolar protein-sorting-associated protein 22)
ruditapes_c19462	negative regulation of transcription from RNA polymerase II promoter by glucose	RNA metabolism	P	Vacuolar-sorting protein SNF8 (ESCRT-II complex subunit VPS22) (Vacuolar protein-sorting-associated protein 22)
ruditapes_c19462	transport	transport	P	Vacuolar-sorting protein SNF8 (ESCRT-II complex subunit VPS22) (Vacuolar protein-sorting-associated protein 22)
ruditapes_c19462	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	protein metabolism	P	Vacuolar-sorting protein SNF8 (ESCRT-II complex subunit VPS22) (Vacuolar protein-sorting-associated protein 22)
ruditapes_c19462	protein transport	transport	P	Vacuolar-sorting protein SNF8 (ESCRT-II complex subunit VPS22) (Vacuolar protein-sorting-associated protein 22)
ruditapes_c13642	metabolic process	other metabolic processes	P	Putative uncharacterized hydrolase YOR131C (EC 3.-.-.-)
ruditapes_c13642	biological_process	other biological processes	P	Putative uncharacterized hydrolase YOR131C (EC 3.-.-.-)
ruditapes_c19002	DNA-dependent DNA replication	DNA metabolism	P	DNA replication complex GINS protein PSF1 (Partner of Sld five 1)
ruditapes_c19002	double-strand break repair via break-induced replication	stress response	P	DNA replication complex GINS protein PSF1 (Partner of Sld five 1)
ruditapes_c19002	double-strand break repair via break-induced replication	DNA metabolism	P	DNA replication complex GINS protein PSF1 (Partner of Sld five 1)
ruditapes_c19002	cell cycle	cell cycle and proliferation	P	DNA replication complex GINS protein PSF1 (Partner of Sld five 1)
ruditapes_c19002	DNA replication	DNA metabolism	P	DNA replication complex GINS protein PSF1 (Partner of Sld five 1)
ruditapes_c1310	biological_process	other biological processes	P	Protein ZPS1
ruditapes_c14655	nucleoside diphosphate metabolic process	other metabolic processes	P	"Peroxisomal coenzyme A diphosphatase 1, peroxisomal (EC 3.6.1.55)"
ruditapes_c14655	biological_process	other biological processes	P	"Peroxisomal coenzyme A diphosphatase 1, peroxisomal (EC 3.6.1.55)"
ruditapes_c20406	oxidation reduction	other metabolic processes	P	Xanthine dehydrogenase (EC 1.17.1.4) (Purine hydroxylase I)
ruditapes_c20406	xanthine catabolic process	other metabolic processes	P	Xanthine dehydrogenase (EC 1.17.1.4) (Purine hydroxylase I)
ruditapes_c24759	cellular amino acid biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c24759	proline biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c24759	arginine biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c24759	phosphorylation	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c28941	cell wall organization	cell organization and biogenesis	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1) (Class-II chitin synthase 1)
ruditapes_c28941	chitin biosynthetic process	other metabolic processes	P	Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase 1) (Class-II chitin synthase 1)
ruditapes_lrc28636	aromatic amino acid family biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc28636	metabolic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc28636	oxidation reduction	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc28636	cellular amino acid biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_lrc28636	phosphorylation	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c31125	sterol biosynthetic process	other metabolic processes	P	Eburicol 14-alpha-demethylase (EC 1.14.13.70) (CYPLI) (Cytochrome P450 51) (Cytochrome P450-14DM) (Cytochrome P450-LIA1) (Sterol 14-alpha demethylase)
ruditapes_c31125	steroid biosynthetic process	other metabolic processes	P	Eburicol 14-alpha-demethylase (EC 1.14.13.70) (CYPLI) (Cytochrome P450 51) (Cytochrome P450-14DM) (Cytochrome P450-LIA1) (Sterol 14-alpha demethylase)
ruditapes_c31125	oxidation reduction	other metabolic processes	P	Eburicol 14-alpha-demethylase (EC 1.14.13.70) (CYPLI) (Cytochrome P450 51) (Cytochrome P450-14DM) (Cytochrome P450-LIA1) (Sterol 14-alpha demethylase)
ruditapes_c31125	lipid biosynthetic process	other metabolic processes	P	Eburicol 14-alpha-demethylase (EC 1.14.13.70) (CYPLI) (Cytochrome P450 51) (Cytochrome P450-14DM) (Cytochrome P450-LIA1) (Sterol 14-alpha demethylase)
ruditapes2_c1315	protein transport	transport	P	Phospholipid-transporting ATPase DNF2 (EC 3.6.3.1) (Flippase DNF2)
ruditapes2_c1315	establishment or maintenance of cell polarity	cell organization and biogenesis	P	Phospholipid-transporting ATPase DNF2 (EC 3.6.3.1) (Flippase DNF2)
ruditapes2_c1315	phospholipid transport	transport	P	Phospholipid-transporting ATPase DNF2 (EC 3.6.3.1) (Flippase DNF2)
ruditapes2_c1315	transport	transport	P	Phospholipid-transporting ATPase DNF2 (EC 3.6.3.1) (Flippase DNF2)
ruditapes2_c1315	lipid transport	transport	P	Phospholipid-transporting ATPase DNF2 (EC 3.6.3.1) (Flippase DNF2)
ruditapes2_c1315	cation transport	transport	P	Phospholipid-transporting ATPase DNF2 (EC 3.6.3.1) (Flippase DNF2)
ruditapes2_c1315	endocytosis	transport	P	Phospholipid-transporting ATPase DNF2 (EC 3.6.3.1) (Flippase DNF2)
ruditapes2_c1315	endocytosis	cell organization and biogenesis	P	Phospholipid-transporting ATPase DNF2 (EC 3.6.3.1) (Flippase DNF2)
ruditapes2_c1315	intracellular protein transport	transport	P	Phospholipid-transporting ATPase DNF2 (EC 3.6.3.1) (Flippase DNF2)
ruditapes2_c1315	phospholipid translocation	transport	P	Phospholipid-transporting ATPase DNF2 (EC 3.6.3.1) (Flippase DNF2)
ruditapes2_c1315	phospholipid translocation	cell organization and biogenesis	P	Phospholipid-transporting ATPase DNF2 (EC 3.6.3.1) (Flippase DNF2)
ruditapes_c17558	mitochondrial DNA replication	DNA metabolism	P	DNA polymerase gamma (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit)
ruditapes_c17558	mitochondrial DNA replication	cell organization and biogenesis	P	DNA polymerase gamma (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit)
ruditapes_c17558	DNA replication	DNA metabolism	P	DNA polymerase gamma (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit)
ruditapes_c17558	mitochondrion organization	cell organization and biogenesis	P	DNA polymerase gamma (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit)
ruditapes_c17558	mitochondrial genome maintenance	cell organization and biogenesis	P	DNA polymerase gamma (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit)
ruditapes_c17041	metabolic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) (Uridine 5'-monophosphate synthase) (UMP synthase)
ruditapes_c17041	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) (Uridine 5'-monophosphate synthase) (UMP synthase)
ruditapes_c17041	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) (Uridine 5'-monophosphate synthase) (UMP synthase)
ruditapes2_c1794	response to hormone stimulus	other biological processes	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	steroid metabolic process	other metabolic processes	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	response to lead ion	other biological processes	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	"transcription, DNA-dependent"	RNA metabolism	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	aging	other biological processes	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	spermatogenesis	other biological processes	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	response to low density lipoprotein stimulus	other biological processes	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	response to drug	other biological processes	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	response to lipid	other biological processes	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	cholesterol metabolic process	other metabolic processes	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	positive regulation of cholesterol storage	other biological processes	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	positive regulation of transcription via sterol regulatory element binding	signal transduction	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	positive regulation of transcription via sterol regulatory element binding	RNA metabolism	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes2_c1794	lipid metabolic process	other metabolic processes	P	Sterol regulatory element-binding protein 2 (SREBP-2) (Class D basic helix-loop-helix protein 2) (bHLHd2) (Sterol regulatory element-binding transcription factor 2) [Cleaved into: Processed sterol regulatory element-binding protein 2]
ruditapes_c32251	regulation of Rho protein signal transduction	signal transduction	P	Rho guanine nucleotide exchange factor 5 (Ephexin-3) (Guanine nucleotide regulatory protein TIM) (Oncogene TIM) (Transforming immortalized mammary oncogene) (p60 TIM)
ruditapes2_c2723	transport	transport	P	NADH-quinone oxidoreductase subunit C (EC 1.6.99.5) (NADH dehydrogenase I subunit C) (NDH-1 subunit C)
ruditapes2_c2723	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit C (EC 1.6.99.5) (NADH dehydrogenase I subunit C) (NDH-1 subunit C)
ruditapes_c10572	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Nucleosome-remodeling factor subunit BPTF (Bromodomain and PHD finger-containing transcription factor) (Fetal Alz-50 clone 1 protein) (Fetal Alzheimer antigen)
ruditapes_c10572	chromatin modification	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit BPTF (Bromodomain and PHD finger-containing transcription factor) (Fetal Alz-50 clone 1 protein) (Fetal Alzheimer antigen)
ruditapes_c10572	"transcription, DNA-dependent"	RNA metabolism	P	Nucleosome-remodeling factor subunit BPTF (Bromodomain and PHD finger-containing transcription factor) (Fetal Alz-50 clone 1 protein) (Fetal Alzheimer antigen)
ruditapes_c10572	brain development	developmental processes	P	Nucleosome-remodeling factor subunit BPTF (Bromodomain and PHD finger-containing transcription factor) (Fetal Alz-50 clone 1 protein) (Fetal Alzheimer antigen)
ruditapes_c10572	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Nucleosome-remodeling factor subunit BPTF (Bromodomain and PHD finger-containing transcription factor) (Fetal Alz-50 clone 1 protein) (Fetal Alzheimer antigen)
ruditapes_c10572	chromatin remodeling	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit BPTF (Bromodomain and PHD finger-containing transcription factor) (Fetal Alz-50 clone 1 protein) (Fetal Alzheimer antigen)
ruditapes_c10572	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nucleosome-remodeling factor subunit BPTF (Bromodomain and PHD finger-containing transcription factor) (Fetal Alz-50 clone 1 protein) (Fetal Alzheimer antigen)
ruditapes_c13064	protein folding	protein metabolism	P	"Heat shock protein 75 kDa, mitochondrial (HSP 75) (TNFR-associated protein 1) (Tumor necrosis factor type 1 receptor-associated protein) (TRAP-1)"
ruditapes_c13064	cellular response to oxidative stress	stress response	P	"Heat shock protein 75 kDa, mitochondrial (HSP 75) (TNFR-associated protein 1) (Tumor necrosis factor type 1 receptor-associated protein) (TRAP-1)"
ruditapes_c13064	response to stress	stress response	P	"Heat shock protein 75 kDa, mitochondrial (HSP 75) (TNFR-associated protein 1) (Tumor necrosis factor type 1 receptor-associated protein) (TRAP-1)"
ruditapes_c13228	activation of caspase activity	death	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	protein homotrimerization	cell organization and biogenesis	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	protein autoubiquitination	protein metabolism	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	tumor necrosis factor-mediated signaling pathway	signal transduction	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	protein K63-linked ubiquitination	protein metabolism	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	induction of apoptosis by extracellular signals	death	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	regulation of apoptosis	death	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	activation of pro-apoptotic gene products	death	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	innate immune response	stress response	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	positive regulation of T cell activation	other biological processes	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	cellular protein complex assembly	cell organization and biogenesis	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	apoptosis	death	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	positive regulation of interleukin-2 production	other biological processes	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	protein complex assembly	cell organization and biogenesis	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	positive regulation of JUN kinase activity	signal transduction	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	positive regulation of JUN kinase activity	stress response	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	positive regulation of JUN kinase activity	protein metabolism	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	signal transduction	signal transduction	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	positive regulation of T cell cytokine production	other biological processes	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	activation of NF-kappaB-inducing kinase activity	signal transduction	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	positive regulation of transcription factor activity	RNA metabolism	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes_c13228	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	TNF receptor-associated factor 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
ruditapes2_c1849	lens fiber cell development	developmental processes	P	Filensin (Beaded filament structural protein 1) (Lens fiber cell beaded-filament structural protein CP 115) (CP115) (Lens intermediate filament-like heavy) (LIFL-H)
ruditapes2_c1849	cell maturation	other biological processes	P	Filensin (Beaded filament structural protein 1) (Lens fiber cell beaded-filament structural protein CP 115) (CP115) (Lens intermediate filament-like heavy) (LIFL-H)
ruditapes2_c1849	biological_process	other biological processes	P	Filensin (Beaded filament structural protein 1) (Lens fiber cell beaded-filament structural protein CP 115) (CP115) (Lens intermediate filament-like heavy) (LIFL-H)
ruditapes_s39182	viral reproduction	other biological processes	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	protein homooligomerization	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	histone H3 acetylation	protein metabolism	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	histone H3 acetylation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	histone deubiquitination	protein metabolism	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	histone deubiquitination	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	transcription initiation from RNA polymerase II promoter	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_s39182	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)
ruditapes_c27041	biological_process	other biological processes	P	Nitrogen permease regulator 3-like protein (-14 gene protein) (Alpha-globin regulatory element-containing gene protein) (Protein CGTHBA)
ruditapes2_c843	phospholipid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes2_c843	fatty acid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_c16607	metabolic process	other metabolic processes	P	Acetyl-coenzyme A synthetase (AcCoA synthetase) (Acs) (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-activating enzyme)
ruditapes_c20246	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c20246	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c20246	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c20246	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c14043	DNA replication	DNA metabolism	P	DNA polymerase sliding clamp (Proliferating cell nuclear antigen homolog) (PCNA)
ruditapes_c14043	regulation of DNA replication	DNA metabolism	P	DNA polymerase sliding clamp (Proliferating cell nuclear antigen homolog) (PCNA)
ruditapes2_c5126	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c5126	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s35212	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s35212	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s35212	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c5126	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c5126	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c5126	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s35212	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s35212	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c10402	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c10402	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c10402	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c10402	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes2_c564	signal transduction	signal transduction	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes2_c564	positive regulation of GTPase activity	other biological processes	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes_c9847	GTP catabolic process	other metabolic processes	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes_c9847	small GTPase mediated signal transduction	signal transduction	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes2_c564	Rho protein signal transduction	signal transduction	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes2_c564	positive regulation of Rho GTPase activity	signal transduction	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes_c9847	Rho protein signal transduction	signal transduction	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes_c9847	positive regulation of GTPase activity	other biological processes	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes_c9847	cell adhesion	cell adhesion	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes_c9847	signal transduction	signal transduction	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes2_c564	cell adhesion	cell adhesion	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes_c9847	positive regulation of Rho GTPase activity	signal transduction	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes2_c564	regulation of small GTPase mediated signal transduction	signal transduction	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes_c9847	regulation of small GTPase mediated signal transduction	signal transduction	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes2_c564	small GTPase mediated signal transduction	signal transduction	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes2_c564	GTP catabolic process	other metabolic processes	P	Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (p190-B)
ruditapes_c21871	methylation	other metabolic processes	P	PR domain zinc finger protein 2 (EC 2.1.1.43) (GATA-3-binding protein G3B) (Lysine N-methyltransferase 8) (MTB-ZF) (MTE-binding protein) (PR domain-containing protein 2) (Retinoblastoma protein-interacting zinc finger protein) (Zinc finger protein RIZ)
ruditapes_c21871	"regulation of transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 2 (EC 2.1.1.43) (GATA-3-binding protein G3B) (Lysine N-methyltransferase 8) (MTB-ZF) (MTE-binding protein) (PR domain-containing protein 2) (Retinoblastoma protein-interacting zinc finger protein) (Zinc finger protein RIZ)
ruditapes_c21871	histone lysine methylation	protein metabolism	P	PR domain zinc finger protein 2 (EC 2.1.1.43) (GATA-3-binding protein G3B) (Lysine N-methyltransferase 8) (MTB-ZF) (MTE-binding protein) (PR domain-containing protein 2) (Retinoblastoma protein-interacting zinc finger protein) (Zinc finger protein RIZ)
ruditapes_c21871	histone lysine methylation	cell organization and biogenesis	P	PR domain zinc finger protein 2 (EC 2.1.1.43) (GATA-3-binding protein G3B) (Lysine N-methyltransferase 8) (MTB-ZF) (MTE-binding protein) (PR domain-containing protein 2) (Retinoblastoma protein-interacting zinc finger protein) (Zinc finger protein RIZ)
ruditapes_c21871	"transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 2 (EC 2.1.1.43) (GATA-3-binding protein G3B) (Lysine N-methyltransferase 8) (MTB-ZF) (MTE-binding protein) (PR domain-containing protein 2) (Retinoblastoma protein-interacting zinc finger protein) (Zinc finger protein RIZ)
ruditapes_c21871	response to estradiol stimulus	other biological processes	P	PR domain zinc finger protein 2 (EC 2.1.1.43) (GATA-3-binding protein G3B) (Lysine N-methyltransferase 8) (MTB-ZF) (MTE-binding protein) (PR domain-containing protein 2) (Retinoblastoma protein-interacting zinc finger protein) (Zinc finger protein RIZ)
ruditapes_lrc20614	negative regulation of apoptosis	death	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	positive regulation of neuron differentiation	developmental processes	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	positive regulation of cell growth	other biological processes	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	response to UV	other biological processes	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	fat cell differentiation	other biological processes	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	positive regulation of proteolysis	protein metabolism	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	positive regulation of protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	protein polyubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	positive regulation of cell migration	other biological processes	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	innate immune response	stress response	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	positive regulation of neurogenesis	developmental processes	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	positive regulation of cell cycle	cell cycle and proliferation	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_lrc20614	response to tumor necrosis factor	other biological processes	P	E3 ubiquitin-protein ligase TRIM32 (EC 6.3.2.-) (72 kDa Tat-interacting protein) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
ruditapes_c27418	signal transduction	signal transduction	P	Liprin-alpha-1 (LAR-interacting protein 1) (LIP-1) (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-1) (PTPRF-interacting protein alpha-1)
ruditapes_c27418	cell-matrix adhesion	cell adhesion	P	Liprin-alpha-1 (LAR-interacting protein 1) (LIP-1) (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-1) (PTPRF-interacting protein alpha-1)
ruditapes_c16071	metabolic process	other metabolic processes	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	protein amino acid autophosphorylation	protein metabolism	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	negative regulation of cell proliferation involved in contact inhibition	cell cycle and proliferation	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	T cell receptor signaling pathway	signal transduction	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	positive regulation of estrogen receptor signaling pathway	signal transduction	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	axon guidance	cell organization and biogenesis	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	neuron projection morphogenesis	developmental processes	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	neuron projection morphogenesis	cell organization and biogenesis	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	MAPKKK cascade	signal transduction	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	apoptosis	death	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	wound healing	stress response	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	actin cytoskeleton reorganization	cell organization and biogenesis	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	axon guidance	developmental processes	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	branching morphogenesis of a tube	developmental processes	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	T cell costimulation	other biological processes	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	positive regulation of JUN kinase activity	signal transduction	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	positive regulation of JUN kinase activity	stress response	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_c16071	positive regulation of JUN kinase activity	protein metabolism	P	Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (Alpha-PAK) (p21-activated kinase 1) (PAK-1) (p65-PAK)
ruditapes_lrc15013	apoptosis	death	P	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)
ruditapes_lrc15013	tRNA aminoacylation for protein translation	protein metabolism	P	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)
ruditapes_lrc15013	tRNA aminoacylation for protein translation	RNA metabolism	P	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)
ruditapes_lrc15013	multicellular organismal development	developmental processes	P	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)
ruditapes_lrc15013	gene expression	other metabolic processes	P	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)
ruditapes_lrc15013	translation	protein metabolism	P	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)
ruditapes_lrc15013	cell differentiation	other biological processes	P	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)
ruditapes_c21487	defense response to virus	stress response	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	apoptosis	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	activation of caspase activity	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	innate immune response	stress response	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	induction of apoptosis via death domain receptors	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	positive regulation of interleukin-8 production	other biological processes	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	activation of pro-apoptotic gene products	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	induction of apoptosis by extracellular signals	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	positive regulation of apoptosis	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	positive regulation of tumor necrosis factor production	other biological processes	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	regulation of apoptosis	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	necrotic cell death	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	signal transduction	signal transduction	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	interspecies interaction between organisms	other biological processes	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c21487	positive regulation of type I interferon-mediated signaling pathway	signal transduction	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)
ruditapes_c13663	negative regulation of protein kinase activity	other metabolic processes	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	apoptosis	death	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	T cell receptor signaling pathway	signal transduction	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	regulation of growth	other biological processes	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	T cell costimulation	other biological processes	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	viral reproduction	other biological processes	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	cell structure disassembly during apoptosis	death	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	metabolic process	other metabolic processes	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	signal transduction	signal transduction	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	protein amino acid autophosphorylation	protein metabolism	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	axon guidance	developmental processes	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	axon guidance	cell organization and biogenesis	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	cell structure disassembly during apoptosis	cell organization and biogenesis	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	peptidyl-serine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	regulation of apoptosis	death	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	interspecies interaction between organisms	other biological processes	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	regulation of defense response to virus by virus	stress response	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c13663	positive regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (Gamma-PAK) (PAK65) (S6/H4 kinase) (p21-activated kinase 2) (PAK-2) (p58) [Cleaved into: PAK-2p27 (p27); PAK-2p34 (p34) (C-t-PAK2)]
ruditapes_c6929	immune response	other biological processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c6929	chitin catabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c6929	carbohydrate metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c6929	polysaccharide catabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c6929	metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c6929	response to bacterium	other biological processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c6929	chitin metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c14762	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase S (R-PTP-S) (EC 3.1.3.48) (Receptor-type tyrosine-protein phosphatase sigma) (R-PTP-sigma)
ruditapes_c14762	cerebellum development	developmental processes	P	Receptor-type tyrosine-protein phosphatase S (R-PTP-S) (EC 3.1.3.48) (Receptor-type tyrosine-protein phosphatase sigma) (R-PTP-sigma)
ruditapes_c14762	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase S (R-PTP-S) (EC 3.1.3.48) (Receptor-type tyrosine-protein phosphatase sigma) (R-PTP-sigma)
ruditapes_c14762	cerebral cortex development	developmental processes	P	Receptor-type tyrosine-protein phosphatase S (R-PTP-S) (EC 3.1.3.48) (Receptor-type tyrosine-protein phosphatase sigma) (R-PTP-sigma)
ruditapes_c14762	corpus callosum development	developmental processes	P	Receptor-type tyrosine-protein phosphatase S (R-PTP-S) (EC 3.1.3.48) (Receptor-type tyrosine-protein phosphatase sigma) (R-PTP-sigma)
ruditapes_c14762	hippocampus development	developmental processes	P	Receptor-type tyrosine-protein phosphatase S (R-PTP-S) (EC 3.1.3.48) (Receptor-type tyrosine-protein phosphatase sigma) (R-PTP-sigma)
ruditapes_c14762	cell adhesion	cell adhesion	P	Receptor-type tyrosine-protein phosphatase S (R-PTP-S) (EC 3.1.3.48) (Receptor-type tyrosine-protein phosphatase sigma) (R-PTP-sigma)
ruditapes_c14762	spinal cord development	developmental processes	P	Receptor-type tyrosine-protein phosphatase S (R-PTP-S) (EC 3.1.3.48) (Receptor-type tyrosine-protein phosphatase sigma) (R-PTP-sigma)
ruditapes_c28427	cell-matrix adhesion	cell adhesion	P	Integrin alpha-D (ADB2) (CD11 antigen-like family member D) (Leukointegrin alpha D) (CD antigen CD11d)
ruditapes_c28427	cell adhesion	cell adhesion	P	Integrin alpha-D (ADB2) (CD11 antigen-like family member D) (Leukointegrin alpha D) (CD antigen CD11d)
ruditapes_c28427	integrin-mediated signaling pathway	signal transduction	P	Integrin alpha-D (ADB2) (CD11 antigen-like family member D) (Leukointegrin alpha D) (CD antigen CD11d)
ruditapes_c28427	cell-cell adhesion	cell adhesion	P	Integrin alpha-D (ADB2) (CD11 antigen-like family member D) (Leukointegrin alpha D) (CD antigen CD11d)
ruditapes_c28427	immune response	other biological processes	P	Integrin alpha-D (ADB2) (CD11 antigen-like family member D) (Leukointegrin alpha D) (CD antigen CD11d)
ruditapes_c28427	activated T cell proliferation	cell cycle and proliferation	P	Integrin alpha-D (ADB2) (CD11 antigen-like family member D) (Leukointegrin alpha D) (CD antigen CD11d)
ruditapes_c3567	leukocyte migration	other biological processes	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes2_c1398	protein polyubiquitination	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes_c3567	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes_c3567	protein polyubiquitination	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes2_c1398	leukocyte migration	other biological processes	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes_c3567	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes_c3567	blood coagulation	stress response	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes_c3567	protein ubiquitination	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes2_c1398	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes2_c1398	blood coagulation	stress response	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes2_c1398	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes2_c1398	protein ubiquitination	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase PPIL2)
ruditapes_c29499	glucose homeostasis	other biological processes	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	blood coagulation	stress response	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	signal transduction	signal transduction	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	negative regulation of cAMP-mediated signaling	signal transduction	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	endocrine pancreas development	developmental processes	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	cellular response to insulin stimulus	other biological processes	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	negative regulation of cell adhesion	cell adhesion	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	negative regulation of insulin secretion	transport	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	negative regulation of insulin secretion	cell-cell signaling	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	negative regulation of lipid catabolic process	other metabolic processes	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	regulation of insulin secretion	transport	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	regulation of insulin secretion	cell-cell signaling	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	insulin receptor signaling pathway	signal transduction	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	negative regulation of cell adhesion mediated by integrin	cell adhesion	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c29499	cAMP catabolic process	other metabolic processes	P	"cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (CGIPDE1) (CGIP1) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B)"
ruditapes_c9077	methylation	other metabolic processes	P	Probable methyltransferase TARBP1 (EC 2.1.1.-) (TAR RNA-binding protein 1) (TAR RNA-binding protein of 185 kDa) (TRP-185)
ruditapes_c9077	RNA processing	RNA metabolism	P	Probable methyltransferase TARBP1 (EC 2.1.1.-) (TAR RNA-binding protein 1) (TAR RNA-binding protein of 185 kDa) (TRP-185)
ruditapes_c9077	RNA methylation	RNA metabolism	P	Probable methyltransferase TARBP1 (EC 2.1.1.-) (TAR RNA-binding protein 1) (TAR RNA-binding protein of 185 kDa) (TRP-185)
ruditapes_c9077	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Probable methyltransferase TARBP1 (EC 2.1.1.-) (TAR RNA-binding protein 1) (TAR RNA-binding protein of 185 kDa) (TRP-185)
ruditapes_c29089	sensory perception of sound	other biological processes	P	Unconventional myosin-VIIa
ruditapes_c29089	sensory perception of light stimulus	other biological processes	P	Unconventional myosin-VIIa
ruditapes_c29089	equilibrioception	other biological processes	P	Unconventional myosin-VIIa
ruditapes_c29089	phagocytosis	transport	P	Unconventional myosin-VIIa
ruditapes_c29089	phagocytosis	cell organization and biogenesis	P	Unconventional myosin-VIIa
ruditapes_c29089	actin filament-based movement	transport	P	Unconventional myosin-VIIa
ruditapes_c29089	auditory receptor cell stereocilium organization	developmental processes	P	Unconventional myosin-VIIa
ruditapes_c29089	auditory receptor cell stereocilium organization	cell organization and biogenesis	P	Unconventional myosin-VIIa
ruditapes_c29089	post-embryonic organ morphogenesis	developmental processes	P	Unconventional myosin-VIIa
ruditapes_c29089	sensory perception	other biological processes	P	Unconventional myosin-VIIa
ruditapes_c29089	mechanoreceptor differentiation	developmental processes	P	Unconventional myosin-VIIa
ruditapes_c29089	eye photoreceptor cell development	developmental processes	P	Unconventional myosin-VIIa
ruditapes_c29089	pigment granule localization	other biological processes	P	Unconventional myosin-VIIa
ruditapes_c29089	visual perception	other biological processes	P	Unconventional myosin-VIIa
ruditapes_c29089	inner ear morphogenesis	developmental processes	P	Unconventional myosin-VIIa
ruditapes_c29089	phagolysosome formation	transport	P	Unconventional myosin-VIIa
ruditapes_c29089	phagolysosome formation	cell organization and biogenesis	P	Unconventional myosin-VIIa
ruditapes_c29089	cell projection organization	cell organization and biogenesis	P	Unconventional myosin-VIIa
ruditapes_c29089	inner ear development	developmental processes	P	Unconventional myosin-VIIa
ruditapes_c29089	auditory receptor cell differentiation	developmental processes	P	Unconventional myosin-VIIa
ruditapes_c29089	lysosome organization	cell organization and biogenesis	P	Unconventional myosin-VIIa
ruditapes_c29089	inner ear receptor cell differentiation	developmental processes	P	Unconventional myosin-VIIa
ruditapes_c29089	pigment granule transport	transport	P	Unconventional myosin-VIIa
ruditapes_c3591	tricarboxylic acid cycle	other metabolic processes	P	"NAD(P) transhydrogenase, mitochondrial (EC 1.6.1.2) (Nicotinamide nucleotide transhydrogenase) (Pyridine nucleotide transhydrogenase)"
ruditapes_c3591	oxidation reduction	other metabolic processes	P	"NAD(P) transhydrogenase, mitochondrial (EC 1.6.1.2) (Nicotinamide nucleotide transhydrogenase) (Pyridine nucleotide transhydrogenase)"
ruditapes_c3591	proton transport	transport	P	"NAD(P) transhydrogenase, mitochondrial (EC 1.6.1.2) (Nicotinamide nucleotide transhydrogenase) (Pyridine nucleotide transhydrogenase)"
ruditapes2_c399	proton transport	transport	P	"NAD(P) transhydrogenase, mitochondrial (EC 1.6.1.2) (Nicotinamide nucleotide transhydrogenase) (Pyridine nucleotide transhydrogenase)"
ruditapes2_c399	tricarboxylic acid cycle	other metabolic processes	P	"NAD(P) transhydrogenase, mitochondrial (EC 1.6.1.2) (Nicotinamide nucleotide transhydrogenase) (Pyridine nucleotide transhydrogenase)"
ruditapes2_c399	oxidation reduction	other metabolic processes	P	"NAD(P) transhydrogenase, mitochondrial (EC 1.6.1.2) (Nicotinamide nucleotide transhydrogenase) (Pyridine nucleotide transhydrogenase)"
ruditapes2_c2571	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase G (PPIase G) (Peptidyl-prolyl isomerase G) (EC 5.2.1.8) (CASP10) (Clk-associating RS-cyclophilin) (CARS-Cyp) (CARS-cyclophilin) (SR-cyclophilin) (SR-cyp) (SRcyp) (Cyclophilin G) (Rotamase G)
ruditapes2_c2571	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase G (PPIase G) (Peptidyl-prolyl isomerase G) (EC 5.2.1.8) (CASP10) (Clk-associating RS-cyclophilin) (CARS-Cyp) (CARS-cyclophilin) (SR-cyclophilin) (SR-cyp) (SRcyp) (Cyclophilin G) (Rotamase G)
ruditapes2_c2571	RNA splicing	RNA metabolism	P	Peptidyl-prolyl cis-trans isomerase G (PPIase G) (Peptidyl-prolyl isomerase G) (EC 5.2.1.8) (CASP10) (Clk-associating RS-cyclophilin) (CARS-Cyp) (CARS-cyclophilin) (SR-cyclophilin) (SR-cyp) (SRcyp) (Cyclophilin G) (Rotamase G)
ruditapes_c30438	mRNA processing	RNA metabolism	P	Splicing factor 3B subunit 2 (Pre-mRNA-splicing factor SF3b 145 kDa subunit) (SF3b145) (SF3b150) (Spliceosome-associated protein 145) (SAP 145)
ruditapes_c30438	interspecies interaction between organisms	other biological processes	P	Splicing factor 3B subunit 2 (Pre-mRNA-splicing factor SF3b 145 kDa subunit) (SF3b145) (SF3b150) (Spliceosome-associated protein 145) (SAP 145)
ruditapes_c30438	gene expression	other metabolic processes	P	Splicing factor 3B subunit 2 (Pre-mRNA-splicing factor SF3b 145 kDa subunit) (SF3b145) (SF3b150) (Spliceosome-associated protein 145) (SAP 145)
ruditapes_c30438	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Splicing factor 3B subunit 2 (Pre-mRNA-splicing factor SF3b 145 kDa subunit) (SF3b145) (SF3b150) (Spliceosome-associated protein 145) (SAP 145)
ruditapes_c30438	RNA splicing	RNA metabolism	P	Splicing factor 3B subunit 2 (Pre-mRNA-splicing factor SF3b 145 kDa subunit) (SF3b145) (SF3b150) (Spliceosome-associated protein 145) (SAP 145)
ruditapes_c24061	cognition	other biological processes	P	Tumor suppressor candidate 3 (Magnesium uptake/transporter TUSC3) (Protein N33)
ruditapes_c24061	magnesium ion transport	transport	P	Tumor suppressor candidate 3 (Magnesium uptake/transporter TUSC3) (Protein N33)
ruditapes_c24061	post-translational protein modification	protein metabolism	P	Tumor suppressor candidate 3 (Magnesium uptake/transporter TUSC3) (Protein N33)
ruditapes_c24061	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Tumor suppressor candidate 3 (Magnesium uptake/transporter TUSC3) (Protein N33)
ruditapes_c24061	transport	transport	P	Tumor suppressor candidate 3 (Magnesium uptake/transporter TUSC3) (Protein N33)
ruditapes_c24061	cellular protein metabolic process	protein metabolism	P	Tumor suppressor candidate 3 (Magnesium uptake/transporter TUSC3) (Protein N33)
ruditapes_c24061	protein amino acid N-linked glycosylation	protein metabolism	P	Tumor suppressor candidate 3 (Magnesium uptake/transporter TUSC3) (Protein N33)
ruditapes_c24061	cell redox homeostasis	other biological processes	P	Tumor suppressor candidate 3 (Magnesium uptake/transporter TUSC3) (Protein N33)
ruditapes_c28432	cell surface receptor linked signal transduction	signal transduction	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c28432	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c22596	regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c22596	cell surface receptor linked signal transduction	signal transduction	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c25912	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c25912	cell surface receptor linked signal transduction	signal transduction	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c25571	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c28432	apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c22596	apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c25912	regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c25571	cell surface receptor linked signal transduction	signal transduction	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c28432	regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c25571	regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c25571	apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c22596	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c25912	apoptosis	death	P	Baculoviral IAP repeat-containing protein 3 (EC 6.3.2.-) (Apoptosis inhibitor 2) (API2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (IAP-1) (hIAP-1) (hIAP1) (RING finger protein 49) (TNFR2-TRAF-signaling complex protein 1)
ruditapes_c16242	cell structure disassembly during apoptosis	cell organization and biogenesis	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c16242	cell structure disassembly during apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c7814	regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c16242	negative regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c16242	cell surface receptor linked signal transduction	signal transduction	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c7814	cell surface receptor linked signal transduction	signal transduction	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c16242	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c16242	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c7814	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c7814	protein polyubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c7814	placenta development	developmental processes	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c7814	cell structure disassembly during apoptosis	cell organization and biogenesis	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c7814	cell structure disassembly during apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c16242	protein polyubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c7814	negative regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c16242	apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c16242	regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c7814	apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c16242	placenta development	developmental processes	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes_c7814	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (IAP-2) (hIAP-2) (hIAP2) (RING finger protein 48) (TNFR2-TRAF-signaling complex protein 2)
ruditapes2_lrc5238	cell cycle arrest	cell cycle and proliferation	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	detection of mechanical stimulus	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	heart development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	transmembrane calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	kidney development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	determination of left/right symmetry	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	embryonic placenta development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	determination of left/right symmetry	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	cellular calcium ion homeostasis	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	positive regulation of gene expression	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	negative regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	positive regulation of gene expression	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	detection of mechanical stimulus	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	determination of left/right symmetry	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	release of sequestered calcium ion into cytosol	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	embryonic placenta development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	embryonic placenta development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	cellular calcium ion homeostasis	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	cell cycle arrest	cell cycle and proliferation	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	determination of left/right symmetry	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	heart development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	kidney development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	cellular calcium ion homeostasis	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	cellular calcium ion homeostasis	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	cell cycle arrest	cell cycle and proliferation	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	transmembrane calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	JAK-STAT cascade	signal transduction	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	regulation of cAMP metabolic process	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	release of sequestered calcium ion into cytosol	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	JAK-STAT cascade	signal transduction	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	release of sequestered calcium ion into cytosol	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	kidney development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	JAK-STAT cascade	signal transduction	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	regulation of cAMP metabolic process	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	cell cycle arrest	cell cycle and proliferation	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	embryonic placenta development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	negative regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	heart development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	regulation of cAMP metabolic process	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	kidney development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	release of sequestered calcium ion into cytosol	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	transmembrane transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	transmembrane calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	heart development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	positive regulation of gene expression	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	detection of mechanical stimulus	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	kidney development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	JAK-STAT cascade	signal transduction	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	positive regulation of gene expression	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	detection of mechanical stimulus	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	kidney development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	negative regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	negative regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	positive regulation of gene expression	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	heart development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	transmembrane calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	determination of left/right symmetry	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	positive regulation of gene expression	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	embryonic placenta development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	release of sequestered calcium ion into cytosol	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	transmembrane transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	transmembrane transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	transmembrane calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	embryonic placenta development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	embryonic placenta development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	JAK-STAT cascade	signal transduction	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	negative regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	transmembrane transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	transmembrane transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	positive regulation of gene expression	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	transmembrane calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	positive regulation of gene expression	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	transmembrane transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	transmembrane transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	cellular calcium ion homeostasis	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	cell cycle arrest	cell cycle and proliferation	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	cellular calcium ion homeostasis	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	regulation of cAMP metabolic process	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	release of sequestered calcium ion into cytosol	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	regulation of cAMP metabolic process	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	determination of left/right symmetry	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	cell cycle arrest	cell cycle and proliferation	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	embryonic placenta development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	cell cycle arrest	cell cycle and proliferation	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	detection of mechanical stimulus	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	cell cycle arrest	cell cycle and proliferation	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	cellular calcium ion homeostasis	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	JAK-STAT cascade	signal transduction	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	regulation of cAMP metabolic process	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	negative regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	heart development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34762	heart development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	regulation of cAMP metabolic process	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	negative regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	regulation of cAMP metabolic process	other metabolic processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	negative regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	JAK-STAT cascade	signal transduction	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	detection of mechanical stimulus	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	JAK-STAT cascade	signal transduction	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	cellular calcium ion homeostasis	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	heart development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	kidney development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	kidney development	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s39628	transmembrane calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	detection of mechanical stimulus	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc35213	release of sequestered calcium ion into cytosol	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	transmembrane calcium ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	detection of mechanical stimulus	other biological processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc5238	ion transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_s36884	determination of left/right symmetry	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc34656	release of sequestered calcium ion into cytosol	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes2_lrc4962	transmembrane transport	transport	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_lrc39263	determination of left/right symmetry	developmental processes	P	Polycystin-2 (Autosomal dominant polycystic kidney disease type II protein) (Polycystic kidney disease 2 protein) (Polycystwin) (R48321)
ruditapes_c26533	negative regulation of mitotic cell cycle	cell cycle and proliferation	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	blood coagulation	stress response	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	negative regulation of Ras protein signal transduction	signal transduction	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	lipid phosphorylation	other metabolic processes	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	negative regulation of catalytic activity	other biological processes	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	cell migration	other biological processes	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	G1 DNA damage checkpoint	signal transduction	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	G1 DNA damage checkpoint	stress response	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	phosphorylation	other metabolic processes	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	platelet activation	stress response	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c26533	G1 DNA damage checkpoint	cell cycle and proliferation	P	Diacylglycerol kinase zeta (DAG kinase zeta) (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta)
ruditapes_c22428	regulation of small GTPase mediated signal transduction	signal transduction	P	Ras GTPase-activating-like protein IQGAP2
ruditapes_c22428	small GTPase mediated signal transduction	signal transduction	P	Ras GTPase-activating-like protein IQGAP2
ruditapes_c22428	positive regulation of GTPase activity	other biological processes	P	Ras GTPase-activating-like protein IQGAP2
ruditapes_c22428	signal transduction	signal transduction	P	Ras GTPase-activating-like protein IQGAP2
ruditapes_c22428	positive regulation of Ras GTPase activity	signal transduction	P	Ras GTPase-activating-like protein IQGAP2
ruditapes2_c2356	G-protein coupled receptor protein signaling pathway	signal transduction	P	Melatonin-related receptor (G protein-coupled receptor 50) (H9)
ruditapes2_c2356	signal transduction	signal transduction	P	Melatonin-related receptor (G protein-coupled receptor 50) (H9)
ruditapes2_c2356	cell-cell signaling	cell-cell signaling	P	Melatonin-related receptor (G protein-coupled receptor 50) (H9)
ruditapes_c28333	branching morphogenesis of a tube	developmental processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c12671	multicellular organismal development	developmental processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c12671	nervous system development	developmental processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c28333	nervous system development	developmental processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c12671	axon guidance	developmental processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c12671	axon guidance	cell organization and biogenesis	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c28333	cell differentiation	other biological processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c12671	branching morphogenesis of a tube	developmental processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c12671	cell differentiation	other biological processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c12671	signal transduction	signal transduction	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c28333	patterning of blood vessels	developmental processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c12671	cell adhesion	cell adhesion	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c12671	cell-cell signaling	cell-cell signaling	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c12671	patterning of blood vessels	developmental processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c28333	axon guidance	developmental processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c28333	axon guidance	cell organization and biogenesis	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c28333	multicellular organismal development	developmental processes	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c28333	signal transduction	signal transduction	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c28333	cell adhesion	cell adhesion	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c28333	cell-cell signaling	cell-cell signaling	P	Semaphorin-5A (Semaphorin-F) (Sema F)
ruditapes_c8918	potassium ion transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c8918	chloride transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c8918	sodium ion transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c8918	ion transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c8918	transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c8918	excretion	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c8918	transmembrane ion transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c8918	kidney development	developmental processes	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c8918	chemical homeostasis	other biological processes	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c8918	transmembrane transport	transport	P	Solute carrier family 12 member 1 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter)
ruditapes_c18385	GDP-mannose metabolic process	other metabolic processes	P	"GDP-L-fucose synthase (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) (Protein FX) (Red cell NADP(H)-binding protein) (Short-chain dehydrogenase/reductase family 4E member 1)"
ruditapes_c18385	oxidation reduction	other metabolic processes	P	"GDP-L-fucose synthase (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) (Protein FX) (Red cell NADP(H)-binding protein) (Short-chain dehydrogenase/reductase family 4E member 1)"
ruditapes_c18385	cellular metabolic process	other metabolic processes	P	"GDP-L-fucose synthase (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) (Protein FX) (Red cell NADP(H)-binding protein) (Short-chain dehydrogenase/reductase family 4E member 1)"
ruditapes_c18385	GDP-L-fucose biosynthetic process	other metabolic processes	P	"GDP-L-fucose synthase (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) (Protein FX) (Red cell NADP(H)-binding protein) (Short-chain dehydrogenase/reductase family 4E member 1)"
ruditapes_c18385	leukocyte adhesion	cell adhesion	P	"GDP-L-fucose synthase (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) (Protein FX) (Red cell NADP(H)-binding protein) (Short-chain dehydrogenase/reductase family 4E member 1)"
ruditapes_c18385	'de novo' GDP-L-fucose biosynthetic process	other metabolic processes	P	"GDP-L-fucose synthase (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) (Protein FX) (Red cell NADP(H)-binding protein) (Short-chain dehydrogenase/reductase family 4E member 1)"
ruditapes_c18385	metabolic process	other metabolic processes	P	"GDP-L-fucose synthase (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) (Protein FX) (Red cell NADP(H)-binding protein) (Short-chain dehydrogenase/reductase family 4E member 1)"
ruditapes_c14602	signal transduction	signal transduction	P	CD166 antigen (Activated leukocyte cell adhesion molecule) (CD antigen CD166)
ruditapes_c14602	cell adhesion	cell adhesion	P	CD166 antigen (Activated leukocyte cell adhesion molecule) (CD antigen CD166)
ruditapes_c14602	motor axon guidance	developmental processes	P	CD166 antigen (Activated leukocyte cell adhesion molecule) (CD antigen CD166)
ruditapes_c14602	motor axon guidance	cell organization and biogenesis	P	CD166 antigen (Activated leukocyte cell adhesion molecule) (CD antigen CD166)
ruditapes_c14602	axon guidance	developmental processes	P	CD166 antigen (Activated leukocyte cell adhesion molecule) (CD antigen CD166)
ruditapes_c14602	axon guidance	cell organization and biogenesis	P	CD166 antigen (Activated leukocyte cell adhesion molecule) (CD antigen CD166)
ruditapes_c13419	transcription from RNA polymerase II promoter	RNA metabolism	P	Core-binding factor subunit beta (CBF-beta) (Polyomavirus enhancer-binding protein 2 beta subunit) (PEA2-beta) (PEBP2-beta) (SL3-3 enhancer factor 1 subunit beta) (SL3/AKV core-binding factor beta subunit)
ruditapes_c13419	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Core-binding factor subunit beta (CBF-beta) (Polyomavirus enhancer-binding protein 2 beta subunit) (PEA2-beta) (PEBP2-beta) (SL3-3 enhancer factor 1 subunit beta) (SL3/AKV core-binding factor beta subunit)
ruditapes_s38003	transport	transport	P	NADH-quinone oxidoreductase subunit B 1 (EC 1.6.99.5) (NADH dehydrogenase I subunit B 1) (NDH-1 subunit B 1)
ruditapes_s38003	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit B 1 (EC 1.6.99.5) (NADH dehydrogenase I subunit B 1) (NDH-1 subunit B 1)
ruditapes_c15209	response to oxidative stress	stress response	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes_c15209	oxidation reduction	other metabolic processes	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes_c15209	hydrogen peroxide catabolic process	stress response	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes_c15209	hydrogen peroxide catabolic process	other metabolic processes	P	Catalase-peroxidase (CP) (EC 1.11.1.21) (Peroxidase/catalase)
ruditapes_c13452	cellular amino acid catabolic process	other metabolic processes	P	L-rhamnonate dehydratase (RhamD) (EC 4.2.1.90)
ruditapes_c13452	metabolic process	other metabolic processes	P	L-rhamnonate dehydratase (RhamD) (EC 4.2.1.90)
ruditapes_c19130	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c19130	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c19130	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c19130	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c9643	transcription termination	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c9643	transcription termination	cell organization and biogenesis	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c9643	"transcription, DNA-dependent"	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c9643	"regulation of transcription, DNA-dependent"	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_lrc11645	lipoprotein transport	transport	P	Lipoprotein-releasing system ATP-binding protein LolD (EC 3.6.3.-)
ruditapes_lrc11645	ATP catabolic process	other metabolic processes	P	Lipoprotein-releasing system ATP-binding protein LolD (EC 3.6.3.-)
ruditapes_lrc11645	transport	transport	P	Lipoprotein-releasing system ATP-binding protein LolD (EC 3.6.3.-)
ruditapes_lrc37160	lipid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2)
ruditapes_lrc37160	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2)
ruditapes_c5922	defense response to fungus	stress response	P	Coactosin-like protein
ruditapes_c5922	biological_process	other biological processes	P	Coactosin-like protein
ruditapes_c23650	sensory perception of smell	other biological processes	P	Cyclic nucleotide-gated cation channel beta-1 (Cyclic nucleotide-gated cation channel 4) (CNG channel 4) (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel gamma) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-1) (CNG channel beta-1) (Glutamic acid-rich protein) (GARP)
ruditapes_c23650	phototransduction	other biological processes	P	Cyclic nucleotide-gated cation channel beta-1 (Cyclic nucleotide-gated cation channel 4) (CNG channel 4) (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel gamma) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-1) (CNG channel beta-1) (Glutamic acid-rich protein) (GARP)
ruditapes_c23650	photoreceptor cell maintenance	other biological processes	P	Cyclic nucleotide-gated cation channel beta-1 (Cyclic nucleotide-gated cation channel 4) (CNG channel 4) (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel gamma) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-1) (CNG channel beta-1) (Glutamic acid-rich protein) (GARP)
ruditapes_c23650	transport	transport	P	Cyclic nucleotide-gated cation channel beta-1 (Cyclic nucleotide-gated cation channel 4) (CNG channel 4) (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel gamma) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-1) (CNG channel beta-1) (Glutamic acid-rich protein) (GARP)
ruditapes_c23650	ion transport	transport	P	Cyclic nucleotide-gated cation channel beta-1 (Cyclic nucleotide-gated cation channel 4) (CNG channel 4) (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel gamma) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-1) (CNG channel beta-1) (Glutamic acid-rich protein) (GARP)
ruditapes_c23650	response to stimulus	other biological processes	P	Cyclic nucleotide-gated cation channel beta-1 (Cyclic nucleotide-gated cation channel 4) (CNG channel 4) (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel gamma) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-1) (CNG channel beta-1) (Glutamic acid-rich protein) (GARP)
ruditapes_c23650	visual perception	other biological processes	P	Cyclic nucleotide-gated cation channel beta-1 (Cyclic nucleotide-gated cation channel 4) (CNG channel 4) (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel gamma) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-1) (CNG channel beta-1) (Glutamic acid-rich protein) (GARP)
ruditapes_c20629	spermatogenesis	other biological processes	P	Cyclin-I
ruditapes_c13218	receptor-mediated endocytosis	transport	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c13218	receptor-mediated endocytosis	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c13218	dendrite development	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c13218	dendrite development	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c13218	neuron remodeling	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c13218	positive regulation of axon regeneration	stress response	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c13218	positive regulation of axon regeneration	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c13218	positive regulation of axon regeneration	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c13218	cholesterol catabolic process	other metabolic processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c13218	cell adhesion	cell adhesion	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c13218	positive regulation of neuron projection development	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c13218	positive regulation of neuron projection development	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1) (SREC-I)
ruditapes_c17575	pyridoxal 5'-phosphate salvage	other metabolic processes	P	Pyridoxamine kinase (PM kinase) (EC 2.7.1.35)
ruditapes_c17575	phosphorylation	other metabolic processes	P	Pyridoxamine kinase (PM kinase) (EC 2.7.1.35)
ruditapes_c4603	multicellular organismal development	developmental processes	P	Zinc finger MYM-type protein 3 (Zinc finger protein 261)
ruditapes_c4603	regulation of cell morphogenesis	cell organization and biogenesis	P	Zinc finger MYM-type protein 3 (Zinc finger protein 261)
ruditapes_c4603	cytoskeleton organization	cell organization and biogenesis	P	Zinc finger MYM-type protein 3 (Zinc finger protein 261)
ruditapes_c1623	mitotic cell cycle	cell cycle and proliferation	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c1623	microtubule-based movement	other biological processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c1623	transport	transport	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c1623	mitotic spindle organization	cell cycle and proliferation	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c1623	mitotic spindle organization	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c1623	ATP catabolic process	other metabolic processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c1623	cytoplasmic mRNA processing body assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c1623	G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c1623	stress granule assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c14357	signal transduction	signal transduction	P	Fibroleukin (Fibrinogen-like protein 2) (pT49)
ruditapes_c31233	gene expression	other metabolic processes	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c31233	mRNA processing	RNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	mRNA transport	transport	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c31233	mRNA transport	transport	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	regulation of S phase	cell cycle and proliferation	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c31233	histone mRNA metabolic process	RNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c31233	transcription from RNA polymerase II promoter	RNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	transcription from RNA polymerase II promoter	RNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	termination of RNA polymerase II transcription	RNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	termination of RNA polymerase II transcription	cell organization and biogenesis	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c31233	histone mRNA 3'-end processing	RNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c31233	regulation of S phase	cell cycle and proliferation	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c31233	DNA replication during S phase	cell cycle and proliferation	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c31233	DNA replication during S phase	DNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c31233	termination of RNA polymerase II transcription	RNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c31233	termination of RNA polymerase II transcription	cell organization and biogenesis	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	gene expression	other metabolic processes	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	mRNA export from nucleus	transport	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	DNA replication during S phase	cell cycle and proliferation	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	DNA replication during S phase	DNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c31233	mRNA export from nucleus	transport	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	histone mRNA 3'-end processing	RNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	mRNA processing	RNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes2_c1612	histone mRNA metabolic process	RNA metabolism	P	Histone RNA hairpin-binding protein (Histone stem-loop-binding protein)
ruditapes_c23984	signal transduction	signal transduction	P	SPARC-like protein 1 (High endothelial venule protein) (Hevin) (MAST 9)
ruditapes_c11302	anatomical structure morphogenesis	other biological processes	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c4367	cell migration	other biological processes	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c4367	cell-cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c4367	establishment or maintenance of cell polarity	cell organization and biogenesis	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c22720	cell-cell signaling	cell-cell signaling	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c11302	cell migration	other biological processes	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c2414	establishment or maintenance of cell polarity	cell organization and biogenesis	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_lrc38307	anatomical structure morphogenesis	other biological processes	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c4367	cell-cell signaling	cell-cell signaling	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c11302	establishment or maintenance of cell polarity	cell organization and biogenesis	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c11302	cell-cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c11302	cell-cell signaling	cell-cell signaling	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c22720	homophilic cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c4367	cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_lrc38307	homophilic cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c2414	cell migration	other biological processes	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c2414	cell-cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c22720	anatomical structure morphogenesis	other biological processes	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_lrc38307	actin filament organization	cell organization and biogenesis	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c22720	actin filament organization	cell organization and biogenesis	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c2414	cell-cell signaling	cell-cell signaling	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c2414	cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c11302	cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c22720	cell-cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_lrc38307	cell-cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c4367	anatomical structure morphogenesis	other biological processes	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c22720	cell migration	other biological processes	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c22720	establishment or maintenance of cell polarity	cell organization and biogenesis	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c2414	anatomical structure morphogenesis	other biological processes	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_lrc38307	establishment or maintenance of cell polarity	cell organization and biogenesis	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c2414	homophilic cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_lrc38307	cell migration	other biological processes	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c11302	homophilic cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c4367	homophilic cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_lrc38307	cell-cell signaling	cell-cell signaling	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_lrc38307	cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c2414	actin filament organization	cell organization and biogenesis	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes2_c4367	actin filament organization	cell organization and biogenesis	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c11302	actin filament organization	cell organization and biogenesis	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_c22720	cell adhesion	cell adhesion	P	"Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]"
ruditapes_s39929	"transcription, DNA-dependent"	RNA metabolism	P	Helicase-like transcription factor (EC 3.6.4.-) (EC 6.3.2.-) (DNA-binding protein/plasminogen activator inhibitor 1 regulator) (HIP116) (RING finger protein 80) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3)
ruditapes_s39929	chromatin modification	cell organization and biogenesis	P	Helicase-like transcription factor (EC 3.6.4.-) (EC 6.3.2.-) (DNA-binding protein/plasminogen activator inhibitor 1 regulator) (HIP116) (RING finger protein 80) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3)
ruditapes_s39929	metabolic process	other metabolic processes	P	Helicase-like transcription factor (EC 3.6.4.-) (EC 6.3.2.-) (DNA-binding protein/plasminogen activator inhibitor 1 regulator) (HIP116) (RING finger protein 80) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3)
ruditapes_s39929	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Helicase-like transcription factor (EC 3.6.4.-) (EC 6.3.2.-) (DNA-binding protein/plasminogen activator inhibitor 1 regulator) (HIP116) (RING finger protein 80) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3)
ruditapes_s39929	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Helicase-like transcription factor (EC 3.6.4.-) (EC 6.3.2.-) (DNA-binding protein/plasminogen activator inhibitor 1 regulator) (HIP116) (RING finger protein 80) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3)
ruditapes_s39929	ATP catabolic process	other metabolic processes	P	Helicase-like transcription factor (EC 3.6.4.-) (EC 6.3.2.-) (DNA-binding protein/plasminogen activator inhibitor 1 regulator) (HIP116) (RING finger protein 80) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3)
ruditapes_lrc36584	protein folding	protein metabolism	P	Putative heat shock protein HSP 90-alpha A2 (Heat shock 90 kDa protein 1 alpha-like 3)
ruditapes_lrc36584	response to stress	stress response	P	Putative heat shock protein HSP 90-alpha A2 (Heat shock 90 kDa protein 1 alpha-like 3)
ruditapes_lrc36584	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	Putative heat shock protein HSP 90-alpha A2 (Heat shock 90 kDa protein 1 alpha-like 3)
ruditapes_c26887	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 268 (Zinc finger protein HZF3)
ruditapes_c26887	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 268 (Zinc finger protein HZF3)
ruditapes_c5515	response to exogenous dsRNA	other biological processes	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	Toll signaling pathway	signal transduction	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	toll-like receptor 4 signaling pathway	signal transduction	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	toll-like receptor 4 signaling pathway	stress response	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	response to lipopolysaccharide	other biological processes	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	response to bacterium	other biological processes	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	lipopolysaccharide-mediated signaling pathway	signal transduction	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	innate immune response	stress response	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	"transcription, DNA-dependent"	RNA metabolism	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	cytokine-mediated signaling pathway	signal transduction	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	type I interferon biosynthetic process	other metabolic processes	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	toll-like receptor 3 signaling pathway	stress response	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	response to virus	other biological processes	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	MyD88-independent toll-like receptor signaling pathway	signal transduction	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	MyD88-independent toll-like receptor signaling pathway	stress response	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	positive regulation of cytokine secretion	transport	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	interferon-gamma-mediated signaling pathway	signal transduction	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	negative regulation of defense response to virus by host	stress response	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	toll-like receptor 3 signaling pathway	signal transduction	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	type I interferon-mediated signaling pathway	signal transduction	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	transcription from RNA polymerase II promoter	RNA metabolism	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	interspecies interaction between organisms	other biological processes	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	negative regulation of interferon-beta biosynthetic process	other metabolic processes	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c5515	negative regulation of type I interferon production	other biological processes	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c23317	steroid metabolic process	other metabolic processes	P	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)
ruditapes_c23317	regulation of transcription factor import into nucleus	transport	P	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)
ruditapes_c23317	metabolic process	other metabolic processes	P	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)
ruditapes_c23317	activation of signaling protein activity involved in unfolded protein response	stress response	P	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)
ruditapes_c23317	activation of signaling protein activity involved in unfolded protein response	other metabolic processes	P	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)
ruditapes_c23317	cholesterol metabolic process	other metabolic processes	P	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)
ruditapes_c23317	proteolysis	protein metabolism	P	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)
ruditapes_c23317	lipid metabolic process	other metabolic processes	P	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)
ruditapes_c23317	endoplasmic reticulum unfolded protein response	signal transduction	P	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)
ruditapes_c23317	endoplasmic reticulum unfolded protein response	stress response	P	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)
ruditapes_c23317	activation of signaling protein activity involved in unfolded protein response	signal transduction	P	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)
ruditapes_s34189	signal transduction	signal transduction	P	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform (PP2A B subunit isoform B'-delta) (PP2A B subunit isoform B56-delta) (PP2A B subunit isoform PR61-delta) (PP2A B subunit isoform R5-delta)
ruditapes_s34189	nervous system development	developmental processes	P	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform (PP2A B subunit isoform B'-delta) (PP2A B subunit isoform B56-delta) (PP2A B subunit isoform PR61-delta) (PP2A B subunit isoform R5-delta)
ruditapes_c9420	oligosaccharide biosynthetic process	other metabolic processes	P	Conserved oligomeric Golgi complex subunit 2 (COG complex subunit 2) (Component of oligomeric Golgi complex 2) (Low density lipoprotein receptor defect C-complementing protein)
ruditapes_c9420	Golgi organization	cell organization and biogenesis	P	Conserved oligomeric Golgi complex subunit 2 (COG complex subunit 2) (Component of oligomeric Golgi complex 2) (Low density lipoprotein receptor defect C-complementing protein)
ruditapes_c9420	intracellular protein transport	transport	P	Conserved oligomeric Golgi complex subunit 2 (COG complex subunit 2) (Component of oligomeric Golgi complex 2) (Low density lipoprotein receptor defect C-complementing protein)
ruditapes_c9420	transport	transport	P	Conserved oligomeric Golgi complex subunit 2 (COG complex subunit 2) (Component of oligomeric Golgi complex 2) (Low density lipoprotein receptor defect C-complementing protein)
ruditapes_c9420	intra-Golgi vesicle-mediated transport	transport	P	Conserved oligomeric Golgi complex subunit 2 (COG complex subunit 2) (Component of oligomeric Golgi complex 2) (Low density lipoprotein receptor defect C-complementing protein)
ruditapes_c9420	protein transport	transport	P	Conserved oligomeric Golgi complex subunit 2 (COG complex subunit 2) (Component of oligomeric Golgi complex 2) (Low density lipoprotein receptor defect C-complementing protein)
ruditapes_c9420	protein amino acid glycosylation	protein metabolism	P	Conserved oligomeric Golgi complex subunit 2 (COG complex subunit 2) (Component of oligomeric Golgi complex 2) (Low density lipoprotein receptor defect C-complementing protein)
ruditapes2_c2199	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 846
ruditapes2_c2199	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 846
ruditapes2_c1967	kidney development	developmental processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	cell development	other biological processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	post-embryonic development	developmental processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	skeletal system morphogenesis	developmental processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	face morphogenesis	other biological processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	muscle organ morphogenesis	developmental processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	platelet-derived growth factor receptor signaling pathway	signal transduction	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	positive regulation of transcription factor activity	RNA metabolism	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	nitrogen compound metabolic process	other metabolic processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	multicellular organism growth	other biological processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	adipose tissue development	developmental processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	palate development	other biological processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	fat cell differentiation	other biological processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	liver development	developmental processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	"regulation of transcription, DNA-dependent"	RNA metabolism	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	"transcription, DNA-dependent"	RNA metabolism	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	fat pad development	developmental processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	adrenal gland development	developmental processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	female gonad development	developmental processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	fibroblast migration	other biological processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes2_c1967	male gonad development	developmental processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (MRF1-like protein) (Modulator recognition factor 2) (MRF-2)
ruditapes_c2689	apoptosis	death	P	Migration and invasion enhancer 1
ruditapes_c2689	negative regulation of apoptosis	death	P	Migration and invasion enhancer 1
ruditapes_c6210	positive regulation of cell migration	other biological processes	P	Migration and invasion enhancer 1
ruditapes_c2689	cell redox homeostasis	other biological processes	P	Migration and invasion enhancer 1
ruditapes_c840	apoptosis	death	P	Migration and invasion enhancer 1
ruditapes_c840	positive regulation of filopodium assembly	cell organization and biogenesis	P	Migration and invasion enhancer 1
ruditapes_c2689	positive regulation of cell migration	other biological processes	P	Migration and invasion enhancer 1
ruditapes_c2689	positive regulation of filopodium assembly	cell organization and biogenesis	P	Migration and invasion enhancer 1
ruditapes_c6210	positive regulation of filopodium assembly	cell organization and biogenesis	P	Migration and invasion enhancer 1
ruditapes_c840	positive regulation of cell migration	other biological processes	P	Migration and invasion enhancer 1
ruditapes_c6210	apoptosis	death	P	Migration and invasion enhancer 1
ruditapes_c840	negative regulation of apoptosis	death	P	Migration and invasion enhancer 1
ruditapes_c6210	cell redox homeostasis	other biological processes	P	Migration and invasion enhancer 1
ruditapes_c840	cell redox homeostasis	other biological processes	P	Migration and invasion enhancer 1
ruditapes_c6210	negative regulation of apoptosis	death	P	Migration and invasion enhancer 1
ruditapes_c24439	cation transport	transport	P	Probable phospholipid-transporting ATPase IC (EC 3.6.3.1) (ATPase class I type 8B member 1)
ruditapes_c24439	bile acid metabolic process	other metabolic processes	P	Probable phospholipid-transporting ATPase IC (EC 3.6.3.1) (ATPase class I type 8B member 1)
ruditapes_c24439	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable phospholipid-transporting ATPase IC (EC 3.6.3.1) (ATPase class I type 8B member 1)
ruditapes_c24439	phospholipid transport	transport	P	Probable phospholipid-transporting ATPase IC (EC 3.6.3.1) (ATPase class I type 8B member 1)
ruditapes_c30134	translation	protein metabolism	P	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B (Eukaryotic peptide chain release factor subunit 3b) (eRF3b) (G1 to S phase transition protein 2 homolog)
ruditapes_c30134	GTP catabolic process	other metabolic processes	P	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B (Eukaryotic peptide chain release factor subunit 3b) (eRF3b) (G1 to S phase transition protein 2 homolog)
ruditapes_c30134	cell cycle	cell cycle and proliferation	P	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B (Eukaryotic peptide chain release factor subunit 3b) (eRF3b) (G1 to S phase transition protein 2 homolog)
ruditapes_c30134	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B (Eukaryotic peptide chain release factor subunit 3b) (eRF3b) (G1 to S phase transition protein 2 homolog)
ruditapes_c24718	detection of tumor cell	other biological processes	P	Cytotoxic and regulatory T-cell molecule (Class-I MHC-restricted T-cell-associated molecule) (CD antigen CD355)
ruditapes_c24718	cell recognition	other biological processes	P	Cytotoxic and regulatory T-cell molecule (Class-I MHC-restricted T-cell-associated molecule) (CD antigen CD355)
ruditapes_c24718	positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target	stress response	P	Cytotoxic and regulatory T-cell molecule (Class-I MHC-restricted T-cell-associated molecule) (CD antigen CD355)
ruditapes_c24718	positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target	death	P	Cytotoxic and regulatory T-cell molecule (Class-I MHC-restricted T-cell-associated molecule) (CD antigen CD355)
ruditapes_c24718	positive regulation of cytokine secretion	transport	P	Cytotoxic and regulatory T-cell molecule (Class-I MHC-restricted T-cell-associated molecule) (CD antigen CD355)
ruditapes_c24718	detection of stimulus	other biological processes	P	Cytotoxic and regulatory T-cell molecule (Class-I MHC-restricted T-cell-associated molecule) (CD antigen CD355)
ruditapes_c24718	positive regulation of natural killer cell mediated cytotoxicity	stress response	P	Cytotoxic and regulatory T-cell molecule (Class-I MHC-restricted T-cell-associated molecule) (CD antigen CD355)
ruditapes_c24718	positive regulation of natural killer cell mediated cytotoxicity	death	P	Cytotoxic and regulatory T-cell molecule (Class-I MHC-restricted T-cell-associated molecule) (CD antigen CD355)
ruditapes_c25276	gene silencing by RNA	other metabolic processes	P	Putative ATP-dependent RNA helicase TDRD9 (EC 3.6.4.13) (Tudor domain-containing protein 9)
ruditapes_c25276	meiosis	cell cycle and proliferation	P	Putative ATP-dependent RNA helicase TDRD9 (EC 3.6.4.13) (Tudor domain-containing protein 9)
ruditapes_c25276	cell differentiation	other biological processes	P	Putative ATP-dependent RNA helicase TDRD9 (EC 3.6.4.13) (Tudor domain-containing protein 9)
ruditapes_c25276	DNA methylation during gametogenesis	DNA metabolism	P	Putative ATP-dependent RNA helicase TDRD9 (EC 3.6.4.13) (Tudor domain-containing protein 9)
ruditapes_c25276	spermatogenesis	other biological processes	P	Putative ATP-dependent RNA helicase TDRD9 (EC 3.6.4.13) (Tudor domain-containing protein 9)
ruditapes_c25276	male meiosis	cell cycle and proliferation	P	Putative ATP-dependent RNA helicase TDRD9 (EC 3.6.4.13) (Tudor domain-containing protein 9)
ruditapes_c25276	fertilization	other biological processes	P	Putative ATP-dependent RNA helicase TDRD9 (EC 3.6.4.13) (Tudor domain-containing protein 9)
ruditapes_c25276	multicellular organismal development	developmental processes	P	Putative ATP-dependent RNA helicase TDRD9 (EC 3.6.4.13) (Tudor domain-containing protein 9)
ruditapes_c25276	piRNA metabolic process	RNA metabolism	P	Putative ATP-dependent RNA helicase TDRD9 (EC 3.6.4.13) (Tudor domain-containing protein 9)
ruditapes_c8511	molybdopterin cofactor metabolic process	protein metabolism	P	Molybdenum cofactor sulfurase (MCS) (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Molybdenum cofactor sulfurtransferase)
ruditapes_c8511	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Molybdenum cofactor sulfurase (MCS) (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Molybdenum cofactor sulfurtransferase)
ruditapes_c8511	metabolic process	other metabolic processes	P	Molybdenum cofactor sulfurase (MCS) (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Molybdenum cofactor sulfurtransferase)
ruditapes_c17024	biological_process	other biological processes	P	Transmembrane protein 132B
ruditapes_c19650	"virion attachment, binding of host cell surface receptor"	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c19650	interspecies interaction between organisms	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c19650	pathogenesis	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c19650	membrane fusion	cell organization and biogenesis	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c10530	RNA processing	RNA metabolism	P	Squamous cell carcinoma antigen recognized by T-cells 3 (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa) (Tip110)
ruditapes_lrc33331	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc32898	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c13873	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c13873	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_s37249	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_s37249	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c13873	skeletal system development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_s37249	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_s37249	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc33331	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc33815	skeletal system development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc32898	skeletal system development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c13873	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc33815	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc32898	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc33331	skeletal system development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc33815	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc32898	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc33815	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc33815	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc32898	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_s37249	skeletal system development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc33331	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc33331	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c13873	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c10806	endocytosis	transport	P	Early endosome antigen 1 (Endosome-associated protein p162) (Zinc finger FYVE domain-containing protein 2)
ruditapes_c10806	endocytosis	cell organization and biogenesis	P	Early endosome antigen 1 (Endosome-associated protein p162) (Zinc finger FYVE domain-containing protein 2)
ruditapes_c10806	vesicle fusion	transport	P	Early endosome antigen 1 (Endosome-associated protein p162) (Zinc finger FYVE domain-containing protein 2)
ruditapes_c10806	vesicle fusion	cell organization and biogenesis	P	Early endosome antigen 1 (Endosome-associated protein p162) (Zinc finger FYVE domain-containing protein 2)
ruditapes_c10806	early endosome to late endosome transport	transport	P	Early endosome antigen 1 (Endosome-associated protein p162) (Zinc finger FYVE domain-containing protein 2)
ruditapes_c10806	synaptic vesicle to endosome fusion	transport	P	Early endosome antigen 1 (Endosome-associated protein p162) (Zinc finger FYVE domain-containing protein 2)
ruditapes_c10806	synaptic vesicle to endosome fusion	cell organization and biogenesis	P	Early endosome antigen 1 (Endosome-associated protein p162) (Zinc finger FYVE domain-containing protein 2)
ruditapes_s32922	oxidation reduction	other metabolic processes	P	Neutrophil cytosol factor 4 (NCF-4) (Neutrophil NADPH oxidase factor 4) (SH3 and PX domain-containing protein 4) (p40-phox) (p40phox)
ruditapes_s32922	immune response	other biological processes	P	Neutrophil cytosol factor 4 (NCF-4) (Neutrophil NADPH oxidase factor 4) (SH3 and PX domain-containing protein 4) (p40-phox) (p40phox)
ruditapes_s32922	cell communication	other biological processes	P	Neutrophil cytosol factor 4 (NCF-4) (Neutrophil NADPH oxidase factor 4) (SH3 and PX domain-containing protein 4) (p40-phox) (p40phox)
ruditapes_c1409	proteolysis	protein metabolism	P	Procollagen C-endopeptidase enhancer 1 (Procollagen COOH-terminal proteinase enhancer 1) (PCPE-1) (Procollagen C-proteinase enhancer 1) (Type 1 procollagen C-proteinase enhancer protein) (Type I procollagen COOH-terminal proteinase enhancer)
ruditapes_c1409	multicellular organismal development	developmental processes	P	Procollagen C-endopeptidase enhancer 1 (Procollagen COOH-terminal proteinase enhancer 1) (PCPE-1) (Procollagen C-proteinase enhancer 1) (Type 1 procollagen C-proteinase enhancer protein) (Type I procollagen COOH-terminal proteinase enhancer)
ruditapes_c1409	positive regulation of peptidase activity	other biological processes	P	Procollagen C-endopeptidase enhancer 1 (Procollagen COOH-terminal proteinase enhancer 1) (PCPE-1) (Procollagen C-proteinase enhancer 1) (Type 1 procollagen C-proteinase enhancer protein) (Type I procollagen COOH-terminal proteinase enhancer)
ruditapes_c28056	positive regulation of protein amino acid dephosphorylation	protein metabolism	P	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform (PP2A B subunit isoform B'-alpha) (PP2A B subunit isoform B56-alpha) (PP2A B subunit isoform PR61-alpha) (PR61alpha) (PP2A B subunit isoform R5-alpha)
ruditapes_c28056	signal transduction	signal transduction	P	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform (PP2A B subunit isoform B'-alpha) (PP2A B subunit isoform B56-alpha) (PP2A B subunit isoform PR61-alpha) (PR61alpha) (PP2A B subunit isoform R5-alpha)
ruditapes_c12571	protein transport	transport	P	Rab GTPase-binding effector protein 1 (Rabaptin-4) (Rabaptin-5) (Rabaptin-5alpha) (Renal carcinoma antigen NY-REN-17)
ruditapes_c12571	positive regulation of GTPase activity	other biological processes	P	Rab GTPase-binding effector protein 1 (Rabaptin-4) (Rabaptin-5) (Rabaptin-5alpha) (Renal carcinoma antigen NY-REN-17)
ruditapes_c12571	transport	transport	P	Rab GTPase-binding effector protein 1 (Rabaptin-4) (Rabaptin-5) (Rabaptin-5alpha) (Renal carcinoma antigen NY-REN-17)
ruditapes_c12571	membrane fusion	cell organization and biogenesis	P	Rab GTPase-binding effector protein 1 (Rabaptin-4) (Rabaptin-5) (Rabaptin-5alpha) (Renal carcinoma antigen NY-REN-17)
ruditapes_c12571	apoptosis	death	P	Rab GTPase-binding effector protein 1 (Rabaptin-4) (Rabaptin-5) (Rabaptin-5alpha) (Renal carcinoma antigen NY-REN-17)
ruditapes_c12571	endocytosis	transport	P	Rab GTPase-binding effector protein 1 (Rabaptin-4) (Rabaptin-5) (Rabaptin-5alpha) (Renal carcinoma antigen NY-REN-17)
ruditapes_c12571	endocytosis	cell organization and biogenesis	P	Rab GTPase-binding effector protein 1 (Rabaptin-4) (Rabaptin-5) (Rabaptin-5alpha) (Renal carcinoma antigen NY-REN-17)
ruditapes_c14535	negative regulation of Ras protein signal transduction	signal transduction	P	Ras GTPase-activating protein 2 (GAP1m)
ruditapes_c14535	signal transduction	signal transduction	P	Ras GTPase-activating protein 2 (GAP1m)
ruditapes_c14535	regulation of small GTPase mediated signal transduction	signal transduction	P	Ras GTPase-activating protein 2 (GAP1m)
ruditapes_c14535	positive regulation of Ras GTPase activity	signal transduction	P	Ras GTPase-activating protein 2 (GAP1m)
ruditapes_c13016	in utero embryonic development	developmental processes	P	Reticulocalbin-1
ruditapes_c13016	camera-type eye development	developmental processes	P	Reticulocalbin-1
ruditapes2_c387	G1 phase of mitotic cell cycle	cell cycle and proliferation	P	Transcription factor E2F5 (E2F-5)
ruditapes2_c387	mitotic cell cycle	cell cycle and proliferation	P	Transcription factor E2F5 (E2F-5)
ruditapes2_c387	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor E2F5 (E2F-5)
ruditapes2_c387	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor E2F5 (E2F-5)
ruditapes2_c387	organ morphogenesis	developmental processes	P	Transcription factor E2F5 (E2F-5)
ruditapes_c14070	macrophage activation	other biological processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	immune response	other biological processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	innate immune response	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	microglial cell activation during immune response	other biological processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	defense response to bacterium	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	macrophage activation	other biological processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	response to bacterial lipoprotein	other biological processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	microglial cell activation during immune response	other biological processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	detection of triacylated bacterial lipoprotein	other biological processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	toll-like receptor signaling pathway	signal transduction	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	toll-like receptor signaling pathway	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	defense response to bacterium	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	response to bacterial lipoprotein	other biological processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	pathogen-associated molecular pattern dependent induction by symbiont of host innate immunity	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	defense response	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	innate immune response	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	immune response	other biological processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	signal transduction	signal transduction	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	inflammatory response	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	pathogen-associated molecular pattern dependent induction by symbiont of host innate immunity	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	positive regulation of interleukin-6 biosynthetic process	other metabolic processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	detection of triacylated bacterial lipoprotein	other biological processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	positive regulation of interleukin-6 biosynthetic process	other metabolic processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	defense response	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	positive regulation of tumor necrosis factor biosynthetic process	other metabolic processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	signal transduction	signal transduction	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	toll-like receptor signaling pathway	signal transduction	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	toll-like receptor signaling pathway	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c17426	positive regulation of tumor necrosis factor biosynthetic process	other metabolic processes	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c14070	inflammatory response	stress response	P	Toll-like receptor 1 (Toll/interleukin-1 receptor-like protein) (TIL) (CD antigen CD281)
ruditapes_c11866	signal transduction	signal transduction	P	Ras suppressor protein 1 (RSP-1) (Rsu-1)
ruditapes_c11866	cell junction assembly	cell organization and biogenesis	P	Ras suppressor protein 1 (RSP-1) (Rsu-1)
ruditapes_c11866	Ras protein signal transduction	signal transduction	P	Ras suppressor protein 1 (RSP-1) (Rsu-1)
ruditapes_c21004	steroid hormone mediated signaling	signal transduction	P	Nuclear receptor subfamily 6 group A member 1 (Germ cell nuclear factor) (GCNF) (hGCNF) (Retinoid receptor-related testis-specific receptor) (RTR) (hRTR)
ruditapes_c21004	spermatogenesis	other biological processes	P	Nuclear receptor subfamily 6 group A member 1 (Germ cell nuclear factor) (GCNF) (hGCNF) (Retinoid receptor-related testis-specific receptor) (RTR) (hRTR)
ruditapes_c21004	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear receptor subfamily 6 group A member 1 (Germ cell nuclear factor) (GCNF) (hGCNF) (Retinoid receptor-related testis-specific receptor) (RTR) (hRTR)
ruditapes_c21004	intracellular receptor-mediated signaling pathway	signal transduction	P	Nuclear receptor subfamily 6 group A member 1 (Germ cell nuclear factor) (GCNF) (hGCNF) (Retinoid receptor-related testis-specific receptor) (RTR) (hRTR)
ruditapes_c21004	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear receptor subfamily 6 group A member 1 (Germ cell nuclear factor) (GCNF) (hGCNF) (Retinoid receptor-related testis-specific receptor) (RTR) (hRTR)
ruditapes_c21004	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Nuclear receptor subfamily 6 group A member 1 (Germ cell nuclear factor) (GCNF) (hGCNF) (Retinoid receptor-related testis-specific receptor) (RTR) (hRTR)
ruditapes_c21004	gamete generation	other biological processes	P	Nuclear receptor subfamily 6 group A member 1 (Germ cell nuclear factor) (GCNF) (hGCNF) (Retinoid receptor-related testis-specific receptor) (RTR) (hRTR)
ruditapes_c21004	cell proliferation	cell cycle and proliferation	P	Nuclear receptor subfamily 6 group A member 1 (Germ cell nuclear factor) (GCNF) (hGCNF) (Retinoid receptor-related testis-specific receptor) (RTR) (hRTR)
ruditapes_c21004	gene expression	other metabolic processes	P	Nuclear receptor subfamily 6 group A member 1 (Germ cell nuclear factor) (GCNF) (hGCNF) (Retinoid receptor-related testis-specific receptor) (RTR) (hRTR)
ruditapes_c20665	ion transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c30350	transmembrane transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c30350	cellular calcium ion homeostasis	other biological processes	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c20665	protein homotetramerization	cell organization and biogenesis	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c30350	ion transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c30350	transmembrane calcium ion transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c20665	transmembrane transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c30350	striated muscle contraction	other biological processes	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c30350	calcium ion transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c20665	transmembrane calcium ion transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c20665	cellular calcium ion homeostasis	other biological processes	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c20665	transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c30350	protein homotetramerization	cell organization and biogenesis	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c30350	transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c20665	calcium ion transport	transport	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c20665	striated muscle contraction	other biological processes	P	Ryanodine receptor 3 (RYR-3) (RyR3) (Brain ryanodine receptor-calcium release channel) (Brain-type ryanodine receptor) (Type 3 ryanodine receptor)
ruditapes_c25483	angiogenesis	developmental processes	P	SH2 domain-containing adapter protein B
ruditapes_c25483	signal transduction	signal transduction	P	SH2 domain-containing adapter protein B
ruditapes_c25483	apoptosis	death	P	SH2 domain-containing adapter protein B
ruditapes_c25483	cell differentiation	other biological processes	P	SH2 domain-containing adapter protein B
ruditapes_c25483	multicellular organismal development	developmental processes	P	SH2 domain-containing adapter protein B
ruditapes_c25483	B cell proliferation	cell cycle and proliferation	P	SH2 domain-containing adapter protein B
ruditapes_c15343	"complement activation, lectin pathway"	stress response	P	Ficolin-2 (37 kDa elastin-binding protein) (Collagen/fibrinogen domain-containing protein 2) (EBP-37) (Ficolin-B) (Ficolin-beta) (Hucolin) (L-ficolin) (Serum lectin p35)
ruditapes_c15343	"complement activation, lectin pathway"	protein metabolism	P	Ficolin-2 (37 kDa elastin-binding protein) (Collagen/fibrinogen domain-containing protein 2) (EBP-37) (Ficolin-B) (Ficolin-beta) (Hucolin) (L-ficolin) (Serum lectin p35)
ruditapes_c15343	innate immune response	stress response	P	Ficolin-2 (37 kDa elastin-binding protein) (Collagen/fibrinogen domain-containing protein 2) (EBP-37) (Ficolin-B) (Ficolin-beta) (Hucolin) (L-ficolin) (Serum lectin p35)
ruditapes_c15343	opsonization	transport	P	Ficolin-2 (37 kDa elastin-binding protein) (Collagen/fibrinogen domain-containing protein 2) (EBP-37) (Ficolin-B) (Ficolin-beta) (Hucolin) (L-ficolin) (Serum lectin p35)
ruditapes_c15343	opsonization	cell organization and biogenesis	P	Ficolin-2 (37 kDa elastin-binding protein) (Collagen/fibrinogen domain-containing protein 2) (EBP-37) (Ficolin-B) (Ficolin-beta) (Hucolin) (L-ficolin) (Serum lectin p35)
ruditapes_c15343	signal transduction	signal transduction	P	Ficolin-2 (37 kDa elastin-binding protein) (Collagen/fibrinogen domain-containing protein 2) (EBP-37) (Ficolin-B) (Ficolin-beta) (Hucolin) (L-ficolin) (Serum lectin p35)
ruditapes2_c731	cell adhesion	cell adhesion	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes2_c731	visual perception	other biological processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes_s38615	chondrocyte differentiation	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes2_c731	extracellular matrix organization	cell organization and biogenesis	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes2_c731	negative regulation of cell adhesion	cell adhesion	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes2_c731	chondrocyte differentiation	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes_s38615	angiogenesis	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes_s38615	cell proliferation	cell cycle and proliferation	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes2_c731	angiogenesis	developmental processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes_s38615	extracellular matrix organization	cell organization and biogenesis	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes2_c731	cell proliferation	cell cycle and proliferation	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes_s38615	negative regulation of cell adhesion	cell adhesion	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes_s38615	response to stimulus	other biological processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes_s38615	cell adhesion	cell adhesion	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes_s38615	visual perception	other biological processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes2_c731	response to stimulus	other biological processes	P	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)
ruditapes_c28989	sensory perception of smell	other biological processes	P	Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92)
ruditapes_c28989	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92)
ruditapes_c28989	signal transduction	signal transduction	P	Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92)
ruditapes_c28989	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92)
ruditapes_c28989	response to stimulus	other biological processes	P	Olfactory receptor 7A5 (Olfactory receptor OR19-17) (Olfactory receptor TPCR92)
ruditapes_c6924	protein targeting to Golgi	transport	P	Thyroid receptor-interacting protein 11 (TR-interacting protein 11) (TRIP-11) (Clonal evolution-related gene on chromosome 14 protein) (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230)
ruditapes_c6924	transcription from RNA polymerase II promoter	RNA metabolism	P	Thyroid receptor-interacting protein 11 (TR-interacting protein 11) (TRIP-11) (Clonal evolution-related gene on chromosome 14 protein) (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230)
ruditapes_c21086	transcription from RNA polymerase II promoter	RNA metabolism	P	Thyroid receptor-interacting protein 11 (TR-interacting protein 11) (TRIP-11) (Clonal evolution-related gene on chromosome 14 protein) (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230)
ruditapes_c12100	protein targeting to Golgi	transport	P	Thyroid receptor-interacting protein 11 (TR-interacting protein 11) (TRIP-11) (Clonal evolution-related gene on chromosome 14 protein) (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230)
ruditapes_c12100	transcription from RNA polymerase II promoter	RNA metabolism	P	Thyroid receptor-interacting protein 11 (TR-interacting protein 11) (TRIP-11) (Clonal evolution-related gene on chromosome 14 protein) (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230)
ruditapes_c21086	protein targeting to Golgi	transport	P	Thyroid receptor-interacting protein 11 (TR-interacting protein 11) (TRIP-11) (Clonal evolution-related gene on chromosome 14 protein) (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230)
ruditapes_c27442	G-protein coupled receptor protein signaling pathway	signal transduction	P	Ovarian cancer G-protein coupled receptor 1 (OGR-1) (G-protein coupled receptor 68) (GPR12A) (Sphingosylphosphorylcholine receptor)
ruditapes_c11176	signal transduction	signal transduction	P	Ovarian cancer G-protein coupled receptor 1 (OGR-1) (G-protein coupled receptor 68) (GPR12A) (Sphingosylphosphorylcholine receptor)
ruditapes_c11176	inflammatory response	stress response	P	Ovarian cancer G-protein coupled receptor 1 (OGR-1) (G-protein coupled receptor 68) (GPR12A) (Sphingosylphosphorylcholine receptor)
ruditapes_c27442	signal transduction	signal transduction	P	Ovarian cancer G-protein coupled receptor 1 (OGR-1) (G-protein coupled receptor 68) (GPR12A) (Sphingosylphosphorylcholine receptor)
ruditapes_c11176	G-protein coupled receptor protein signaling pathway	signal transduction	P	Ovarian cancer G-protein coupled receptor 1 (OGR-1) (G-protein coupled receptor 68) (GPR12A) (Sphingosylphosphorylcholine receptor)
ruditapes_c27442	inflammatory response	stress response	P	Ovarian cancer G-protein coupled receptor 1 (OGR-1) (G-protein coupled receptor 68) (GPR12A) (Sphingosylphosphorylcholine receptor)
ruditapes2_c5473	protein homotetramerization	cell organization and biogenesis	P	CREB-regulated transcription coactivator 1 (Mucoepidermoid carcinoma translocated protein 1 homolog) (Transducer of regulated cAMP response element-binding protein 1) (TORC-1) (Transducer of CREB protein 1)
ruditapes2_c5473	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CREB-regulated transcription coactivator 1 (Mucoepidermoid carcinoma translocated protein 1 homolog) (Transducer of regulated cAMP response element-binding protein 1) (TORC-1) (Transducer of CREB protein 1)
ruditapes2_c5473	"transcription, DNA-dependent"	RNA metabolism	P	CREB-regulated transcription coactivator 1 (Mucoepidermoid carcinoma translocated protein 1 homolog) (Transducer of regulated cAMP response element-binding protein 1) (TORC-1) (Transducer of CREB protein 1)
ruditapes2_c5473	positive regulation of CREB transcription factor activity	RNA metabolism	P	CREB-regulated transcription coactivator 1 (Mucoepidermoid carcinoma translocated protein 1 homolog) (Transducer of regulated cAMP response element-binding protein 1) (TORC-1) (Transducer of CREB protein 1)
ruditapes_c13759	induction of apoptosis by extracellular signals	death	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	small GTPase mediated signal transduction	signal transduction	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	positive regulation of phosphorylation	other metabolic processes	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	endocytosis	transport	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	positive regulation of protein kinase B signaling cascade	signal transduction	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	apoptosis	death	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	regulation of Rho protein signal transduction	signal transduction	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	negative regulation of neuron apoptosis	death	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	endocytosis	cell organization and biogenesis	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	nerve growth factor receptor signaling pathway	signal transduction	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	positive regulation of catalytic activity	other biological processes	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	synaptic vesicle endocytosis	transport	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	synaptic vesicle endocytosis	cell organization and biogenesis	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes_c13759	regulation of small GTPase mediated signal transduction	signal transduction	P	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)
ruditapes2_c4213	negative regulation of tumor necrosis factor-mediated signaling pathway	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	adiponectin-mediated signaling pathway	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	response to ethanol	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of fat cell differentiation	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	fatty acid beta-oxidation	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of protein kinase A signaling cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of hormone secretion	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of hormone secretion	cell-cell signaling	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of protein kinase activity	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	generation of precursor metabolites and energy	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	response to glucose stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of interleukin-8 production	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of glucose import	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	regulation of glucose metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of blood pressure	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of inflammatory response	stress response	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of foam cell differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of platelet-derived growth factor receptor signaling pathway	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of myeloid cell apoptosis	death	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	membrane hyperpolarization	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of fatty acid metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	response to nutrient	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	low-density lipoprotein particle clearance	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of signal transduction	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	glucose metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	response to tumor necrosis factor	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	cellular response to insulin stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of protein amino acid phosphorylation	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of MAP kinase activity	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of cell migration	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	response to glucocorticoid stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of macrophage differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of heterotypic cell-cell adhesion	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of heterotypic cell-cell adhesion	cell adhesion	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of tumor necrosis factor production	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	fatty acid oxidation	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	protein homooligomerization	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	membrane depolarization	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of cholesterol efflux	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	brown fat cell differentiation	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	glucose homeostasis	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of granulocyte differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of synaptic transmission	cell-cell signaling	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	response to hypoxia	stress response	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	response to sucrose stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of cellular protein metabolic process	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of phagocytosis	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of phagocytosis	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of low-density lipoprotein receptor biosynthetic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of smooth muscle cell migration	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of protein amino acid autophosphorylation	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of blood pressure	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	response to drug	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	negative regulation of gluconeogenesis	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c4213	positive regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1) (Gelatin-binding protein)"
ruditapes2_c1174	behavioral fear response	stress response	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	sensory perception of pain	other biological processes	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	locomotory behavior	other biological processes	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	synaptic transmission	cell-cell signaling	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	regulation of insulin secretion	transport	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	regulation of insulin secretion	cell-cell signaling	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	energy reserve metabolic process	other metabolic processes	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	response to pain	stress response	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	glucose homeostasis	other biological processes	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	fear response	stress response	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	transport	transport	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	visual learning	other biological processes	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	calcium ion transport	transport	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	transmembrane calcium ion transport	transport	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	regulation of heart rate	other biological processes	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	ion transport	transport	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	membrane depolarization	other biological processes	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	regulation of transmembrane ion transport	transport	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	behavioral response to pain	stress response	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	neurological system process	other biological processes	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	transmission of nerve impulse	other biological processes	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	transmembrane transport	transport	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes2_c1174	sperm motility	other biological processes	P	"Voltage-dependent R-type calcium channel subunit alpha-1E (Brain calcium channel II) (BII) (Calcium channel, L type, alpha-1 polypeptide, isoform 6) (Voltage-gated calcium channel subunit alpha Cav2.3)"
ruditapes_c14527	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 77 (ZNFpT1)
ruditapes_c14527	biological_process	other biological processes	P	Zinc finger protein 77 (ZNFpT1)
ruditapes_c14527	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 77 (ZNFpT1)
ruditapes_c21757	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 79 (ZNFpT7)
ruditapes_c21757	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 79 (ZNFpT7)
ruditapes_c21757	biological_process	other biological processes	P	Zinc finger protein 79 (ZNFpT7)
ruditapes_c7812	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c17739	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c7812	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c17739	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c7812	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c17739	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c17739	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c7812	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c19795	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase I (EC 2.1.1.191) (23S rRNA m5C1962 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RlmI)
ruditapes_c19795	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase I (EC 2.1.1.191) (23S rRNA m5C1962 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RlmI)
ruditapes_c19795	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase I (EC 2.1.1.191) (23S rRNA m5C1962 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RlmI)
ruditapes_c25238	heme biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase 1 (EC 2.5.1.-) (Heme B farnesyltransferase 1) (Heme O synthase 1)
ruditapes_c25238	heme O biosynthetic process	other metabolic processes	P	Protoheme IX farnesyltransferase 1 (EC 2.5.1.-) (Heme B farnesyltransferase 1) (Heme O synthase 1)
ruditapes_c24816	GTP catabolic process	other metabolic processes	P	Elongation factor G 2 (EF-G 2)
ruditapes_c24816	translational elongation	protein metabolism	P	Elongation factor G 2 (EF-G 2)
ruditapes_c24816	translation	protein metabolism	P	Elongation factor G 2 (EF-G 2)
ruditapes2_c173	response to stress	stress response	P	Heat shock protein beta-2 (HspB2) (DMPK-binding protein) (MKBP)
ruditapes2_c173	response to heat	stress response	P	Heat shock protein beta-2 (HspB2) (DMPK-binding protein) (MKBP)
ruditapes2_c173	positive regulation of catalytic activity	other biological processes	P	Heat shock protein beta-2 (HspB2) (DMPK-binding protein) (MKBP)
ruditapes2_c173	response to unfolded protein	stress response	P	Heat shock protein beta-2 (HspB2) (DMPK-binding protein) (MKBP)
ruditapes2_c173	somatic muscle development	developmental processes	P	Heat shock protein beta-2 (HspB2) (DMPK-binding protein) (MKBP)
ruditapes_c28911	multicellular organismal development	developmental processes	P	Hepatic leukemia factor
ruditapes_c28911	rhythmic process	other biological processes	P	Hepatic leukemia factor
ruditapes_c28911	transcription from RNA polymerase II promoter	RNA metabolism	P	Hepatic leukemia factor
ruditapes_c28911	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Hepatic leukemia factor
ruditapes_c28911	"transcription, DNA-dependent"	RNA metabolism	P	Hepatic leukemia factor
ruditapes2_c2225	signal transduction	signal transduction	P	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform (PP2A B subunit isoform B'-epsilon) (PP2A B subunit isoform B56-epsilon) (PP2A B subunit isoform PR61-epsilon) (PP2A B subunit isoform R5-epsilon)
ruditapes_c22270	apoptosis	death	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	peptidyl-serine phosphorylation	protein metabolism	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	toll-like receptor 4 signaling pathway	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	toll-like receptor 4 signaling pathway	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	osteoclast differentiation	developmental processes	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	"transcription, DNA-dependent"	RNA metabolism	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	toll-like receptor 2 signaling pathway	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	activation of MAPK activity	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	activation of MAPK activity	protein metabolism	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	nerve growth factor receptor signaling pathway	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	toll-like receptor 3 signaling pathway	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	toll-like receptor 3 signaling pathway	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	chemotaxis	other biological processes	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	signal transduction	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	regulation of transcription factor activity	RNA metabolism	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	toll-like receptor 2 signaling pathway	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	stress-activated MAPK cascade	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	cell motion	other biological processes	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	RNA metabolic process	RNA metabolism	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	protein kinase cascade	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	"DNA damage response, signal transduction"	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	"DNA damage response, signal transduction"	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	gene expression	other metabolic processes	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	innate immune response	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	blood coagulation	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	positive regulation of muscle cell differentiation	other biological processes	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	muscle cell differentiation	other biological processes	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	stress-activated MAPK cascade	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	MyD88-independent toll-like receptor signaling pathway	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	MyD88-independent toll-like receptor signaling pathway	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	cell surface receptor linked signal transduction	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	toll-like receptor signaling pathway	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	toll-like receptor signaling pathway	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	response to stress	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	vascular endothelial growth factor receptor signaling pathway	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	Ras protein signal transduction	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	Toll signaling pathway	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	MyD88-dependent toll-like receptor signaling pathway	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	mRNA metabolic process	RNA metabolism	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	platelet activation	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	toll-like receptor 1 signaling pathway	signal transduction	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes_c22270	toll-like receptor 1 signaling pathway	stress response	P	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)
ruditapes2_lrc3304	female pregnancy	other biological processes	P	Pregnancy-specific beta-1-glycoprotein 3 (PS-beta-G-3) (PSBG-3) (Pregnancy-specific glycoprotein 3) (Carcinoembryonic antigen SG5)
ruditapes2_lrc3304	defense response	stress response	P	Pregnancy-specific beta-1-glycoprotein 3 (PS-beta-G-3) (PSBG-3) (Pregnancy-specific glycoprotein 3) (Carcinoembryonic antigen SG5)
ruditapes_s35318	glycogen biosynthetic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_s35318	carbohydrate metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_s35318	glycogen metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c25515	nucleosome disassembly	cell organization and biogenesis	P	"Transcription factor NF-E2 45 kDa subunit (Leucine zipper protein NF-E2) (Nuclear factor, erythroid-derived 2 45 kDa subunit) (p45 NF-E2)"
ruditapes_c25515	multicellular organismal development	developmental processes	P	"Transcription factor NF-E2 45 kDa subunit (Leucine zipper protein NF-E2) (Nuclear factor, erythroid-derived 2 45 kDa subunit) (p45 NF-E2)"
ruditapes_c25515	cell-cell signaling	cell-cell signaling	P	"Transcription factor NF-E2 45 kDa subunit (Leucine zipper protein NF-E2) (Nuclear factor, erythroid-derived 2 45 kDa subunit) (p45 NF-E2)"
ruditapes_c25515	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	"Transcription factor NF-E2 45 kDa subunit (Leucine zipper protein NF-E2) (Nuclear factor, erythroid-derived 2 45 kDa subunit) (p45 NF-E2)"
ruditapes_c25515	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	"Transcription factor NF-E2 45 kDa subunit (Leucine zipper protein NF-E2) (Nuclear factor, erythroid-derived 2 45 kDa subunit) (p45 NF-E2)"
ruditapes_c25515	negative regulation of bone mineralization	developmental processes	P	"Transcription factor NF-E2 45 kDa subunit (Leucine zipper protein NF-E2) (Nuclear factor, erythroid-derived 2 45 kDa subunit) (p45 NF-E2)"
ruditapes_c25515	blood coagulation	stress response	P	"Transcription factor NF-E2 45 kDa subunit (Leucine zipper protein NF-E2) (Nuclear factor, erythroid-derived 2 45 kDa subunit) (p45 NF-E2)"
ruditapes_c25515	"transcription, DNA-dependent"	RNA metabolism	P	"Transcription factor NF-E2 45 kDa subunit (Leucine zipper protein NF-E2) (Nuclear factor, erythroid-derived 2 45 kDa subunit) (p45 NF-E2)"
ruditapes_c25515	hemostasis	other biological processes	P	"Transcription factor NF-E2 45 kDa subunit (Leucine zipper protein NF-E2) (Nuclear factor, erythroid-derived 2 45 kDa subunit) (p45 NF-E2)"
ruditapes_c25515	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Transcription factor NF-E2 45 kDa subunit (Leucine zipper protein NF-E2) (Nuclear factor, erythroid-derived 2 45 kDa subunit) (p45 NF-E2)"
ruditapes_c25515	blood circulation	other biological processes	P	"Transcription factor NF-E2 45 kDa subunit (Leucine zipper protein NF-E2) (Nuclear factor, erythroid-derived 2 45 kDa subunit) (p45 NF-E2)"
ruditapes2_c2224	RNA splicing	RNA metabolism	P	"Serine/arginine-rich splicing factor 7 (Splicing factor 9G8) (Splicing factor, arginine/serine-rich 7)"
ruditapes2_c2224	mRNA 3'-end processing	RNA metabolism	P	"Serine/arginine-rich splicing factor 7 (Splicing factor 9G8) (Splicing factor, arginine/serine-rich 7)"
ruditapes2_c2224	transcription from RNA polymerase II promoter	RNA metabolism	P	"Serine/arginine-rich splicing factor 7 (Splicing factor 9G8) (Splicing factor, arginine/serine-rich 7)"
ruditapes2_c2224	termination of RNA polymerase II transcription	RNA metabolism	P	"Serine/arginine-rich splicing factor 7 (Splicing factor 9G8) (Splicing factor, arginine/serine-rich 7)"
ruditapes2_c2224	termination of RNA polymerase II transcription	cell organization and biogenesis	P	"Serine/arginine-rich splicing factor 7 (Splicing factor 9G8) (Splicing factor, arginine/serine-rich 7)"
ruditapes2_c2224	mRNA export from nucleus	transport	P	"Serine/arginine-rich splicing factor 7 (Splicing factor 9G8) (Splicing factor, arginine/serine-rich 7)"
ruditapes2_c2224	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	"Serine/arginine-rich splicing factor 7 (Splicing factor 9G8) (Splicing factor, arginine/serine-rich 7)"
ruditapes2_c2224	mRNA processing	RNA metabolism	P	"Serine/arginine-rich splicing factor 7 (Splicing factor 9G8) (Splicing factor, arginine/serine-rich 7)"
ruditapes2_c2224	gene expression	other metabolic processes	P	"Serine/arginine-rich splicing factor 7 (Splicing factor 9G8) (Splicing factor, arginine/serine-rich 7)"
ruditapes2_c2224	"negative regulation of nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	"Serine/arginine-rich splicing factor 7 (Splicing factor 9G8) (Splicing factor, arginine/serine-rich 7)"
ruditapes_c36135	response to peptide hormone stimulus	other biological processes	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_c36135	hair follicle development	developmental processes	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_c36135	proteolysis	protein metabolism	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_c36135	response to drug	other biological processes	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_c36135	response to mineralocorticoid stimulus	other biological processes	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_c36135	positive regulation of sodium ion transport	transport	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_lrc12130	xenobiotic metabolic process	other metabolic processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_c19990	toxin metabolic process	other metabolic processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_c19990	estrogen metabolic process	other metabolic processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_c19990	response to organic substance	other biological processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_c19990	xenobiotic metabolic process	other metabolic processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_c19990	endothelial cell migration	other biological processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_c19990	cellular aromatic compound metabolic process	other metabolic processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_lrc12130	oxidation reduction	other metabolic processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_c19990	visual perception	other biological processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_lrc12130	response to toxin	other biological processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_lrc12130	visual perception	other biological processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_lrc12130	endothelial cell migration	other biological processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_lrc12130	response to organic substance	other biological processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_lrc12130	angiogenesis	developmental processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_c19990	response to toxin	other biological processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_lrc12130	cellular aromatic compound metabolic process	other metabolic processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_c19990	oxidation reduction	other metabolic processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_c19990	angiogenesis	developmental processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_lrc12130	estrogen metabolic process	other metabolic processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_lrc12130	toxin metabolic process	other metabolic processes	P	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)
ruditapes_c8437	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	metabolic process	other metabolic processes	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	vacuole organization	cell organization and biogenesis	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	in utero embryonic development	developmental processes	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	N-glycan processing	protein metabolism	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	cellular protein metabolic process	protein metabolism	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	mitochondrion organization	cell organization and biogenesis	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	mannose metabolic process	other metabolic processes	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	alveolus development	developmental processes	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	carbohydrate metabolic process	other metabolic processes	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	respiratory gaseous exchange	other biological processes	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	liver development	developmental processes	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_c8437	post-translational protein modification	protein metabolism	P	"Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)"
ruditapes_lrc19243	lipid biosynthetic process	other metabolic processes	P	Ceramide glucosyltransferase (EC 2.4.1.80) (GLCT-1) (Glucosylceramide synthase) (GCS) (UDP-glucose ceramide glucosyltransferase) (UDP-glucose:N-acylsphingosine D-glucosyltransferase)
ruditapes_lrc19243	glucosylceramide biosynthetic process	other metabolic processes	P	Ceramide glucosyltransferase (EC 2.4.1.80) (GLCT-1) (Glucosylceramide synthase) (GCS) (UDP-glucose ceramide glucosyltransferase) (UDP-glucose:N-acylsphingosine D-glucosyltransferase)
ruditapes_lrc19243	glycosphingolipid metabolic process	other metabolic processes	P	Ceramide glucosyltransferase (EC 2.4.1.80) (GLCT-1) (Glucosylceramide synthase) (GCS) (UDP-glucose ceramide glucosyltransferase) (UDP-glucose:N-acylsphingosine D-glucosyltransferase)
ruditapes_lrc19243	glycosphingolipid biosynthetic process	other metabolic processes	P	Ceramide glucosyltransferase (EC 2.4.1.80) (GLCT-1) (Glucosylceramide synthase) (GCS) (UDP-glucose ceramide glucosyltransferase) (UDP-glucose:N-acylsphingosine D-glucosyltransferase)
ruditapes_lrc19243	lipid metabolic process	other metabolic processes	P	Ceramide glucosyltransferase (EC 2.4.1.80) (GLCT-1) (Glucosylceramide synthase) (GCS) (UDP-glucose ceramide glucosyltransferase) (UDP-glucose:N-acylsphingosine D-glucosyltransferase)
ruditapes_lrc19243	sphingolipid metabolic process	other metabolic processes	P	Ceramide glucosyltransferase (EC 2.4.1.80) (GLCT-1) (Glucosylceramide synthase) (GCS) (UDP-glucose ceramide glucosyltransferase) (UDP-glucose:N-acylsphingosine D-glucosyltransferase)
ruditapes_lrc19243	epidermis development	developmental processes	P	Ceramide glucosyltransferase (EC 2.4.1.80) (GLCT-1) (Glucosylceramide synthase) (GCS) (UDP-glucose ceramide glucosyltransferase) (UDP-glucose:N-acylsphingosine D-glucosyltransferase)
ruditapes_c7822	glycogen catabolic process	other metabolic processes	P	"Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform (PHK-gamma-M) (EC 2.7.11.19) (Phosphorylase kinase subunit gamma-1) (Serine/threonine-protein kinase PHKG1) (EC 2.7.11.1) (EC 2.7.11.26)"
ruditapes_c7822	glycogen biosynthetic process	other metabolic processes	P	"Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform (PHK-gamma-M) (EC 2.7.11.19) (Phosphorylase kinase subunit gamma-1) (Serine/threonine-protein kinase PHKG1) (EC 2.7.11.1) (EC 2.7.11.26)"
ruditapes_c7822	phosphorylation	other metabolic processes	P	"Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform (PHK-gamma-M) (EC 2.7.11.19) (Phosphorylase kinase subunit gamma-1) (Serine/threonine-protein kinase PHKG1) (EC 2.7.11.1) (EC 2.7.11.26)"
ruditapes_c7822	glucose metabolic process	other metabolic processes	P	"Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform (PHK-gamma-M) (EC 2.7.11.19) (Phosphorylase kinase subunit gamma-1) (Serine/threonine-protein kinase PHKG1) (EC 2.7.11.1) (EC 2.7.11.26)"
ruditapes_c7822	carbohydrate metabolic process	other metabolic processes	P	"Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform (PHK-gamma-M) (EC 2.7.11.19) (Phosphorylase kinase subunit gamma-1) (Serine/threonine-protein kinase PHKG1) (EC 2.7.11.1) (EC 2.7.11.26)"
ruditapes_c7822	glycogen metabolic process	other metabolic processes	P	"Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform (PHK-gamma-M) (EC 2.7.11.19) (Phosphorylase kinase subunit gamma-1) (Serine/threonine-protein kinase PHKG1) (EC 2.7.11.1) (EC 2.7.11.26)"
ruditapes_c7822	protein amino acid phosphorylation	protein metabolism	P	"Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform (PHK-gamma-M) (EC 2.7.11.19) (Phosphorylase kinase subunit gamma-1) (Serine/threonine-protein kinase PHKG1) (EC 2.7.11.1) (EC 2.7.11.26)"
ruditapes_c30304	proteolysis	protein metabolism	P	Meprin A subunit alpha (EC 3.4.24.18) (Endopeptidase-2) (N-benzoyl-L-tyrosyl-P-amino-benzoic acid hydrolase subunit alpha) (PABA peptide hydrolase) (PPH alpha)
ruditapes_c30304	digestion	other biological processes	P	Meprin A subunit alpha (EC 3.4.24.18) (Endopeptidase-2) (N-benzoyl-L-tyrosyl-P-amino-benzoic acid hydrolase subunit alpha) (PABA peptide hydrolase) (PPH alpha)
ruditapes_c13473	proteolysis	protein metabolism	P	Meprin A subunit beta (EC 3.4.24.63) (Endopeptidase-2) (Meprin B) (N-benzoyl-L-tyrosyl-P-amino-benzoic acid hydrolase subunit beta) (PABA peptide hydrolase) (PPH beta)
ruditapes_c13473	digestion	other biological processes	P	Meprin A subunit beta (EC 3.4.24.63) (Endopeptidase-2) (Meprin B) (N-benzoyl-L-tyrosyl-P-amino-benzoic acid hydrolase subunit beta) (PABA peptide hydrolase) (PPH beta)
ruditapes_c25768	lamellipodium assembly	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	negative regulation of glomerular filtration	other biological processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	cell morphogenesis	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	negative regulation of neuron projection development	developmental processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	negative regulation of neuron projection development	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	negative regulation of cell-substrate adhesion	cell adhesion	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	monocyte chemotaxis	other biological processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	glomerulus development	developmental processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	regulation of glomerular filtration	other biological processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	axon guidance	developmental processes	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c25768	axon guidance	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)
ruditapes_c17740	proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c17740	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c17740	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c17740	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c17740	ion transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c17740	transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes2_c214	ubiquinone biosynthetic process	other metabolic processes	P	"3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) (2-polyprenyl-6-hydroxyphenyl methylase) (EC 2.1.1.222) (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase)"
ruditapes2_c214	methylation	other metabolic processes	P	"3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) (2-polyprenyl-6-hydroxyphenyl methylase) (EC 2.1.1.222) (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase)"
ruditapes_lrc33696	lysine biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_lrc33696	cellular amino acid biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_lrc33696	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_lrc33696	diaminopimelate biosynthetic process	other metabolic processes	P	"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THDP succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase)"
ruditapes_c2681	biological_process	other biological processes	P	Protein real-time
ruditapes2_lrc3483	biological_process	other biological processes	P	Protein real-time
ruditapes_c2681	transport	transport	P	Protein real-time
ruditapes2_lrc3483	transport	transport	P	Protein real-time
ruditapes_c8067	iron-sulfur cluster assembly	other metabolic processes	P	Probable cytosolic Fe-S cluster assembly factor AAEL012261
ruditapes2_c168	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes2_c168	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c2281	defense response to bacterium	stress response	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_c480	cytolysis	death	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c1276	metabolic process	other metabolic processes	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_c480	cell wall macromolecule catabolic process	other metabolic processes	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c1276	cytolysis	death	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_c1750	defense response to bacterium	stress response	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_c480	defense response to bacterium	stress response	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c3380	cytolysis	death	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c3380	cell wall macromolecule catabolic process	other metabolic processes	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c1276	defense response to bacterium	stress response	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c2281	metabolic process	other metabolic processes	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c3380	defense response to bacterium	stress response	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c2281	cell wall macromolecule catabolic process	other metabolic processes	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c3380	metabolic process	other metabolic processes	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_c1750	cell wall macromolecule catabolic process	other metabolic processes	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c2281	cytolysis	death	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_c1750	cytolysis	death	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c1276	cell wall macromolecule catabolic process	other metabolic processes	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_c480	metabolic process	other metabolic processes	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes2_c1750	metabolic process	other metabolic processes	P	"Lysozyme c-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c23474	oxidation reduction	other metabolic processes	P	Aplysianin-A
ruditapes_c23474	defense response to bacterium	stress response	P	Aplysianin-A
ruditapes_c12996	neuropeptide signaling pathway	signal transduction	P	Hypertrehalosaemic prohormone [Cleaved into: Hypertrehalosaemic hormone (HTH) (Hypertrehalosaemic neuropeptide); Hypertrehalosaemic hormone precursor-related peptide]
ruditapes_c24683	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 30 (Mediator complex subunit 30)
ruditapes_c24683	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 30 (Mediator complex subunit 30)
ruditapes_c28275	germ-line sex determination	developmental processes	P	Sex-determining transformer protein 2 (Cb-Tra-2A)
ruditapes_c28275	sex differentiation	other biological processes	P	Sex-determining transformer protein 2 (Cb-Tra-2A)
ruditapes_c28275	cell differentiation	other biological processes	P	Sex-determining transformer protein 2 (Cb-Tra-2A)
ruditapes_c28275	multicellular organismal development	developmental processes	P	Sex-determining transformer protein 2 (Cb-Tra-2A)
ruditapes_c28275	spermatogenesis	other biological processes	P	Sex-determining transformer protein 2 (Cb-Tra-2A)
ruditapes_lrc25632	plasma membrane organization	cell organization and biogenesis	P	Sperm vesicle fusion protein fer-1
ruditapes_lrc25632	pseudopodium organization	cell organization and biogenesis	P	Sperm vesicle fusion protein fer-1
ruditapes_lrc25632	sperm motility	other biological processes	P	Sperm vesicle fusion protein fer-1
ruditapes_lrc25632	spermatogenesis	other biological processes	P	Sperm vesicle fusion protein fer-1
ruditapes_lrc25632	membrane fusion	cell organization and biogenesis	P	Sperm vesicle fusion protein fer-1
ruditapes_lrc25632	cell differentiation	other biological processes	P	Sperm vesicle fusion protein fer-1
ruditapes_lrc25632	multicellular organismal development	developmental processes	P	Sperm vesicle fusion protein fer-1
ruditapes_c25424	multicellular organismal protein catabolic process	protein metabolism	P	Cullin-3 (CUL-3)
ruditapes_c25424	determination of adult life span	developmental processes	P	Cullin-3 (CUL-3)
ruditapes_c25424	pronuclear migration	other biological processes	P	Cullin-3 (CUL-3)
ruditapes_c25424	ubiquitin-dependent protein catabolic process	protein metabolism	P	Cullin-3 (CUL-3)
ruditapes_c25424	embryonic development ending in birth or egg hatching	developmental processes	P	Cullin-3 (CUL-3)
ruditapes_c29972	tRNA processing	RNA metabolism	P	Probable mitochondrial tRNA-specific 2-thiouridylase 1 (EC 2.8.1.-)
ruditapes2_c1204	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase rpm-1 (EC 6.3.2.-) (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3)
ruditapes2_c1204	regulation of protein stability	protein metabolism	P	E3 ubiquitin-protein ligase rpm-1 (EC 6.3.2.-) (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3)
ruditapes2_c1204	regulation of synapse organization	cell organization and biogenesis	P	E3 ubiquitin-protein ligase rpm-1 (EC 6.3.2.-) (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3)
ruditapes2_c1204	regulation of synapse organization	cell-cell signaling	P	E3 ubiquitin-protein ligase rpm-1 (EC 6.3.2.-) (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3)
ruditapes2_c1204	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase rpm-1 (EC 6.3.2.-) (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3)
ruditapes2_c1204	apoptosis	death	P	E3 ubiquitin-protein ligase rpm-1 (EC 6.3.2.-) (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3)
ruditapes2_c1204	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase rpm-1 (EC 6.3.2.-) (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3)
ruditapes2_c1204	body morphogenesis	other biological processes	P	E3 ubiquitin-protein ligase rpm-1 (EC 6.3.2.-) (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3)
ruditapes2_c1204	locomotion	other biological processes	P	E3 ubiquitin-protein ligase rpm-1 (EC 6.3.2.-) (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3)
ruditapes2_c1204	negative regulation of MAPKKK cascade	signal transduction	P	E3 ubiquitin-protein ligase rpm-1 (EC 6.3.2.-) (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3)
ruditapes2_c1204	oviposition	other biological processes	P	E3 ubiquitin-protein ligase rpm-1 (EC 6.3.2.-) (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3)
ruditapes_c4222	embryonic development	developmental processes	P	Chondroitin proteoglycan 1 (Cell junction protein 1) (Cytokinesis protein cej-1)
ruditapes_c4222	chitin metabolic process	other metabolic processes	P	Chondroitin proteoglycan 1 (Cell junction protein 1) (Cytokinesis protein cej-1)
ruditapes_c4222	cytokinesis after mitosis	cell cycle and proliferation	P	Chondroitin proteoglycan 1 (Cell junction protein 1) (Cytokinesis protein cej-1)
ruditapes_c4222	cell cycle	cell cycle and proliferation	P	Chondroitin proteoglycan 1 (Cell junction protein 1) (Cytokinesis protein cej-1)
ruditapes_c4222	embryonic development ending in birth or egg hatching	developmental processes	P	Chondroitin proteoglycan 1 (Cell junction protein 1) (Cytokinesis protein cej-1)
ruditapes_c4222	eggshell formation	other biological processes	P	Chondroitin proteoglycan 1 (Cell junction protein 1) (Cytokinesis protein cej-1)
ruditapes_c4222	cell division	other biological processes	P	Chondroitin proteoglycan 1 (Cell junction protein 1) (Cytokinesis protein cej-1)
ruditapes_c4222	multicellular organismal development	developmental processes	P	Chondroitin proteoglycan 1 (Cell junction protein 1) (Cytokinesis protein cej-1)
ruditapes_c18564	multicellular organismal development	developmental processes	P	Serine/threonine-protein kinase pak-1 (EC 2.7.11.1) (CePAK) (p21-activated kinase 1) (PAK1)
ruditapes_c18564	hemidesmosome assembly	cell organization and biogenesis	P	Serine/threonine-protein kinase pak-1 (EC 2.7.11.1) (CePAK) (p21-activated kinase 1) (PAK1)
ruditapes_c18564	nematode larval development	developmental processes	P	Serine/threonine-protein kinase pak-1 (EC 2.7.11.1) (CePAK) (p21-activated kinase 1) (PAK1)
ruditapes_c18564	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase pak-1 (EC 2.7.11.1) (CePAK) (p21-activated kinase 1) (PAK1)
ruditapes_c18564	inductive cell migration	other biological processes	P	Serine/threonine-protein kinase pak-1 (EC 2.7.11.1) (CePAK) (p21-activated kinase 1) (PAK1)
ruditapes_c18564	embryonic development ending in birth or egg hatching	developmental processes	P	Serine/threonine-protein kinase pak-1 (EC 2.7.11.1) (CePAK) (p21-activated kinase 1) (PAK1)
ruditapes_c18564	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase pak-1 (EC 2.7.11.1) (CePAK) (p21-activated kinase 1) (PAK1)
ruditapes_c18564	gonad morphogenesis	developmental processes	P	Serine/threonine-protein kinase pak-1 (EC 2.7.11.1) (CePAK) (p21-activated kinase 1) (PAK1)
ruditapes_c18564	embryonic body morphogenesis	developmental processes	P	Serine/threonine-protein kinase pak-1 (EC 2.7.11.1) (CePAK) (p21-activated kinase 1) (PAK1)
ruditapes_c18564	embryonic morphogenesis	developmental processes	P	Serine/threonine-protein kinase pak-1 (EC 2.7.11.1) (CePAK) (p21-activated kinase 1) (PAK1)
ruditapes_c4252	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear hormone receptor family member nhr-28
ruditapes_c4252	lipid storage	other biological processes	P	Nuclear hormone receptor family member nhr-28
ruditapes_c4252	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear hormone receptor family member nhr-28
ruditapes_c4252	steroid hormone mediated signaling	signal transduction	P	Nuclear hormone receptor family member nhr-28
ruditapes_c25669	oxidation reduction	other metabolic processes	P	Cholesterol desaturase daf-36 (EC 1.3.1.21)
ruditapes_c25369	oxidation reduction	other metabolic processes	P	Cholesterol desaturase daf-36 (EC 1.3.1.21)
ruditapes_c30977	oxidation reduction	other metabolic processes	P	Cholesterol desaturase daf-36 (EC 1.3.1.21)
ruditapes_c4438	sensory perception of smell	other biological processes	P	Sensory neuron membrane protein 1 (SNMP1Aaeg)
ruditapes_c4438	cell adhesion	cell adhesion	P	Sensory neuron membrane protein 1 (SNMP1Aaeg)
ruditapes_c4438	response to stimulus	other biological processes	P	Sensory neuron membrane protein 1 (SNMP1Aaeg)
ruditapes2_c4526	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Protein SMG8 (Protein smg-8 homolog)
ruditapes_c11690	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 11 (Mediator complex subunit 11)
ruditapes_c11690	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 11 (Mediator complex subunit 11)
ruditapes_c11690	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 11 (Mediator complex subunit 11)
ruditapes_c26769	translation	protein metabolism	P	"Elongation factor Ts, mitochondrial (EF-Ts) (EF-TsMt)"
ruditapes_c26769	translational elongation	protein metabolism	P	"Elongation factor Ts, mitochondrial (EF-Ts) (EF-TsMt)"
ruditapes_c29214	maintenance of ER location	other biological processes	P	DNA-directed RNA polymerase II subunit GRINL1A (DNA-directed RNA polymerase II subunit M) (GRINL1A downstream protein 1) (Gdown1) (Glutamate receptor-like protein 1A)
ruditapes_c29214	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase II subunit GRINL1A (DNA-directed RNA polymerase II subunit M) (GRINL1A downstream protein 1) (Gdown1) (Glutamate receptor-like protein 1A)
ruditapes_c15383	oxidation reduction	other metabolic processes	P	Pyrroline-5-carboxylate reductase 2 (P5C reductase 2) (P5CR 2) (EC 1.5.1.2)
ruditapes_c15383	cellular amino acid biosynthetic process	other metabolic processes	P	Pyrroline-5-carboxylate reductase 2 (P5C reductase 2) (P5CR 2) (EC 1.5.1.2)
ruditapes_c15383	proline biosynthetic process	other metabolic processes	P	Pyrroline-5-carboxylate reductase 2 (P5C reductase 2) (P5CR 2) (EC 1.5.1.2)
ruditapes_c11060	lipid metabolic process	other metabolic processes	P	Pancreatic lipase-related protein 3 (PL-RP3) (EC 3.1.1.3)
ruditapes_c11060	lipid catabolic process	other metabolic processes	P	Pancreatic lipase-related protein 3 (PL-RP3) (EC 3.1.1.3)
ruditapes_c8421	lipid metabolic process	other metabolic processes	P	Pancreatic lipase-related protein 3 (PL-RP3) (EC 3.1.1.3)
ruditapes_c8421	lipid catabolic process	other metabolic processes	P	Pancreatic lipase-related protein 3 (PL-RP3) (EC 3.1.1.3)
ruditapes_c20943	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c20943	carbamoyl phosphate biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c20943	cellular amino acid biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c20943	arginine biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c20943	glutamine catabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c20943	glutamine metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c12220	proteolysis	protein metabolism	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c12220	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c12220	metabolic process	other metabolic processes	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c12220	diaminopimelate biosynthetic process	other metabolic processes	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c12220	lysine biosynthetic process	other metabolic processes	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c12220	cellular amino acid biosynthetic process	other metabolic processes	P	"Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)"
ruditapes_c19073	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c19073	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c19073	glucose catabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_lrc12918	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c18558	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c18558	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_lrc12918	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c17062	ribosome biogenesis	other biological processes	P	GTPase Era
ruditapes_c15712	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c15712	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c15712	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c15712	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c15712	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c15712	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes2_lrc4517	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc3903	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc3903	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc3903	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc4517	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc4517	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_lrc15692	DNA repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_lrc15692	DNA repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_lrc15692	response to DNA damage stimulus	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_lrc15692	base-excision repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_lrc15692	base-excision repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_lrc15692	metabolic process	other metabolic processes	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c30055	transport	transport	P	Organic solute transporter alpha-like protein C18A3.4 (Solute carrier family 51 subunit alpha homolog A)
ruditapes_c30055	embryonic development ending in birth or egg hatching	developmental processes	P	Organic solute transporter alpha-like protein C18A3.4 (Solute carrier family 51 subunit alpha homolog A)
ruditapes_c23581	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear hormone receptor family member nhr-31
ruditapes_c8096	response to osmotic stress	stress response	P	Nuclear hormone receptor family member nhr-31
ruditapes_c8096	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear hormone receptor family member nhr-31
ruditapes_c8096	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear hormone receptor family member nhr-31
ruditapes_c8096	embryonic development ending in birth or egg hatching	developmental processes	P	Nuclear hormone receptor family member nhr-31
ruditapes_c23581	response to osmotic stress	stress response	P	Nuclear hormone receptor family member nhr-31
ruditapes_c8096	steroid hormone mediated signaling	signal transduction	P	Nuclear hormone receptor family member nhr-31
ruditapes_c23581	steroid hormone mediated signaling	signal transduction	P	Nuclear hormone receptor family member nhr-31
ruditapes_c23581	embryonic development ending in birth or egg hatching	developmental processes	P	Nuclear hormone receptor family member nhr-31
ruditapes_c23581	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear hormone receptor family member nhr-31
ruditapes_c31601	transmembrane transport	transport	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c16123	response to stimulus	other biological processes	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c16123	ion transport	transport	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c16123	embryonic development ending in birth or egg hatching	developmental processes	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c4441	ion transport	transport	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c4441	embryonic development ending in birth or egg hatching	developmental processes	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c16123	reproduction	other biological processes	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c31601	response to stimulus	other biological processes	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c31601	ion transport	transport	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c16123	transmembrane transport	transport	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c31601	transport	transport	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c31601	reproduction	other biological processes	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c4441	transmembrane transport	transport	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c4441	response to stimulus	other biological processes	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c16123	transport	transport	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c31601	embryonic development ending in birth or egg hatching	developmental processes	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c4441	reproduction	other biological processes	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c4441	transport	transport	P	Transient receptor potential cation channel subfamily A member 1 homolog
ruditapes_c24319	arginyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c24319	arginyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c24319	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c24319	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c24319	translation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_lrc35738	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5920	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38609	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c798	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc32571	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc35738	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_c153	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_s40326	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc3853	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38071	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5593	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc6290	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_c153	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_s40326	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c4585	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc3853	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5593	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5593	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38071	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc32571	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc3853	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c4585	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc6290	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc32571	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38071	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc32571	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc3853	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c4585	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c4585	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc6290	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_c153	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5920	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc3853	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc32571	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38609	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc35738	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc6290	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c798	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc3853	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38609	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc35738	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc6290	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5920	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc35738	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5593	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c798	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5920	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c798	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c4585	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_s40326	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38071	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_s40326	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_c153	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_c153	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5920	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5593	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc35738	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc32571	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38071	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5593	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc3853	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5920	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38071	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc35738	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_s40326	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_c153	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c798	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c4585	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_s40326	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_s40326	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38609	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5920	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_s40326	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc32571	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c4585	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c4585	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5593	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c798	respiratory electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5593	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c798	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38609	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38071	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc6290	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc35738	determination of adult life span	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_c798	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc6290	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38609	embryonic development ending in birth or egg hatching	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc5920	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38071	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_c153	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc3853	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_c153	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38609	positive regulation of growth rate	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc38609	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc32571	nematode larval development	developmental processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes2_lrc6290	growth	other biological processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
ruditapes_lrc36717	mRNA processing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	locomotion	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	receptor-mediated endocytosis	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	RNA splicing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	nematode larval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	germ cell development	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	locomotion	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	RNA splicing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	receptor-mediated endocytosis	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	mRNA processing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	receptor-mediated endocytosis	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	locomotion	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	secretion by cell	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	apoptosis	death	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	reproduction	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	germ cell development	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	growth	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	growth	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	reproduction	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	growth	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	locomotion	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	receptor-mediated endocytosis	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	negative regulation of vulval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	RNA splicing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	germ cell development	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	cell migration	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	germ cell development	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	RNA splicing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	mRNA processing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	cell migration	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	locomotion	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	secretion by cell	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	cell migration	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	apoptosis	death	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	negative regulation of vulval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	embryonic development ending in birth or egg hatching	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	secretion by cell	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	cell migration	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	cell migration	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	gonad development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	cell migration	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	reproduction	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	negative regulation of vulval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	negative regulation of vulval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	secretion by cell	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	mRNA processing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	reproduction	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	secretion by cell	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	gonad development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	mRNA processing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	embryonic development ending in birth or egg hatching	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	reproduction	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	apoptosis	death	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	mRNA processing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	negative regulation of vulval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	growth	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	receptor-mediated endocytosis	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	gonad development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	embryonic development ending in birth or egg hatching	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	gonad development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	RNA splicing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	embryonic development ending in birth or egg hatching	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	embryonic development ending in birth or egg hatching	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	gonad development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3583	embryonic development ending in birth or egg hatching	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	growth	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	locomotion	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	germ cell development	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	apoptosis	death	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	apoptosis	death	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	nematode larval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	RNA splicing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	secretion by cell	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3594	nematode larval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	germ cell development	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	nematode larval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c3812	nematode larval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	apoptosis	death	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes2_c6192	gonad development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	negative regulation of vulval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	receptor-mediated endocytosis	transport	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	receptor-mediated endocytosis	cell organization and biogenesis	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc36717	reproduction	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	growth	other biological processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc32262	nematode larval development	developmental processes	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_c21340	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit rpt-1) (Proteasome 26S subunit ATPase 2)
ruditapes_c21340	reproduction	other biological processes	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit rpt-1) (Proteasome 26S subunit ATPase 2)
ruditapes_c21340	determination of adult life span	developmental processes	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit rpt-1) (Proteasome 26S subunit ATPase 2)
ruditapes_c21340	ATP catabolic process	other metabolic processes	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit rpt-1) (Proteasome 26S subunit ATPase 2)
ruditapes_c21340	ubiquitin-dependent protein catabolic process	protein metabolism	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit rpt-1) (Proteasome 26S subunit ATPase 2)
ruditapes_c21340	embryonic development ending in birth or egg hatching	developmental processes	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit rpt-1) (Proteasome 26S subunit ATPase 2)
ruditapes_c21340	nematode larval development	developmental processes	P	26S protease regulatory subunit 7 (26S proteasome AAA-ATPase subunit rpt-1) (Proteasome 26S subunit ATPase 2)
ruditapes_c10158	hermaphrodite genitalia development	developmental processes	P	Surfeit locus protein 4 homolog
ruditapes_c10158	growth	other biological processes	P	Surfeit locus protein 4 homolog
ruditapes_c10158	reproduction	other biological processes	P	Surfeit locus protein 4 homolog
ruditapes_c10158	locomotion	other biological processes	P	Surfeit locus protein 4 homolog
ruditapes_c10158	morphogenesis of an epithelium	developmental processes	P	Surfeit locus protein 4 homolog
ruditapes_c26177	reproduction	other biological processes	P	Surfeit locus protein 4 homolog
ruditapes_c26177	embryonic development ending in birth or egg hatching	developmental processes	P	Surfeit locus protein 4 homolog
ruditapes_c10158	embryonic development ending in birth or egg hatching	developmental processes	P	Surfeit locus protein 4 homolog
ruditapes_c26177	secretion by cell	transport	P	Surfeit locus protein 4 homolog
ruditapes_c26177	morphogenesis of an epithelium	developmental processes	P	Surfeit locus protein 4 homolog
ruditapes_c10158	lipid storage	other biological processes	P	Surfeit locus protein 4 homolog
ruditapes_c10158	secretion by cell	transport	P	Surfeit locus protein 4 homolog
ruditapes_c26177	nematode larval development	developmental processes	P	Surfeit locus protein 4 homolog
ruditapes_c26177	locomotion	other biological processes	P	Surfeit locus protein 4 homolog
ruditapes_c26177	growth	other biological processes	P	Surfeit locus protein 4 homolog
ruditapes_c26177	lipid storage	other biological processes	P	Surfeit locus protein 4 homolog
ruditapes_c26177	hermaphrodite genitalia development	developmental processes	P	Surfeit locus protein 4 homolog
ruditapes_c10158	nematode larval development	developmental processes	P	Surfeit locus protein 4 homolog
ruditapes_lrc35154	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_lrc35154	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_lrc35154	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_lrc35154	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_s37504	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_s40036	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_s40036	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_s40036	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes2_c3857	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes2_c3857	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes2_c3857	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes2_c3857	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes2_c3857	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes2_c3857	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_s40036	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_s40036	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_s40036	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c4666	DNA replication	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Hwa polC 1 intein (Hwa pol II 1 intein); Hwa polC 2 intein (Hwa pol II 2 intein)]
ruditapes_c4666	intron homing	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Hwa polC 1 intein (Hwa pol II 1 intein); Hwa polC 2 intein (Hwa pol II 2 intein)]
ruditapes_c4666	metabolic process	other metabolic processes	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Hwa polC 1 intein (Hwa pol II 1 intein); Hwa polC 2 intein (Hwa pol II 2 intein)]
ruditapes_c4666	DNA catabolic process	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Hwa polC 1 intein (Hwa pol II 1 intein); Hwa polC 2 intein (Hwa pol II 2 intein)]
ruditapes_c4666	intein-mediated protein splicing	protein metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Hwa polC 1 intein (Hwa pol II 1 intein); Hwa polC 2 intein (Hwa pol II 2 intein)]
ruditapes_s33196	translation	protein metabolism	P	Translation initiation factor 6 (aIF-6)
ruditapes_s33196	translational initiation	protein metabolism	P	Translation initiation factor 6 (aIF-6)
ruditapes_s33196	mature ribosome assembly	cell organization and biogenesis	P	Translation initiation factor 6 (aIF-6)
ruditapes_c29244	tRNA wobble cytosine modification	RNA metabolism	P	tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS (tRNA(Ile2)-agm2C synthetase) (EC 6.3.4.-) (tRNA(Ile2) agmatidine synthetase)
ruditapes_c29244	tRNA processing	RNA metabolism	P	tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS (tRNA(Ile2)-agm2C synthetase) (EC 6.3.4.-) (tRNA(Ile2) agmatidine synthetase)
ruditapes_c18232	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c18232	translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c18232	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c18232	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c18232	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c18232	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c5933	viral genome packaging	cell organization and biogenesis	P	Virion-packaging protein UL77
ruditapes_c5933	viral capsid assembly	cell organization and biogenesis	P	Virion-packaging protein UL77
ruditapes_c23625	DNA replication	DNA metabolism	P	Major DNA-binding protein
ruditapes_c16110	nematode larval development	developmental processes	P	Serpentine receptor class gamma-69 (Protein srg-69)
ruditapes_c16110	locomotion	other biological processes	P	Serpentine receptor class gamma-69 (Protein srg-69)
ruditapes_c16110	positive regulation of growth rate	other biological processes	P	Serpentine receptor class gamma-69 (Protein srg-69)
ruditapes_c16110	sensory perception of chemical stimulus	other biological processes	P	Serpentine receptor class gamma-69 (Protein srg-69)
ruditapes_c16110	growth	other biological processes	P	Serpentine receptor class gamma-69 (Protein srg-69)
ruditapes2_lrc5825	proteolysis	protein metabolism	P	Zinc metalloproteinase nas-14 (EC 3.4.24.21) (Nematode astacin 14)
ruditapes_lrc35188	proteolysis	protein metabolism	P	Zinc metalloproteinase nas-14 (EC 3.4.24.21) (Nematode astacin 14)
ruditapes_c11604	axon guidance	developmental processes	P	Cadherin-4
ruditapes_c11604	axon guidance	cell organization and biogenesis	P	Cadherin-4
ruditapes_c11604	multicellular organismal development	developmental processes	P	Cadherin-4
ruditapes_c11604	homophilic cell adhesion	cell adhesion	P	Cadherin-4
ruditapes_c11604	cell adhesion	cell adhesion	P	Cadherin-4
ruditapes_c11604	axonal fasciculation	developmental processes	P	Cadherin-4
ruditapes_c11604	axonal fasciculation	cell organization and biogenesis	P	Cadherin-4
ruditapes_c11604	establishment or maintenance of cell polarity	cell organization and biogenesis	P	Cadherin-4
ruditapes_c22164	oxidation reduction	other metabolic processes	P	Putative tyrosinase-like protein tyr-3
ruditapes_c22164	metabolic process	other metabolic processes	P	Putative tyrosinase-like protein tyr-3
ruditapes_c21519	dephosphorylation	other metabolic processes	P	Putative tyrosine phosphatase 067L (EC 3.1.3.-)
ruditapes_c21519	protein amino acid dephosphorylation	protein metabolism	P	Putative tyrosine phosphatase 067L (EC 3.1.3.-)
ruditapes2_c815	ion transport	transport	P	Innexin-3 (Protein opu-3)
ruditapes2_c815	nematode larval development	developmental processes	P	Innexin-3 (Protein opu-3)
ruditapes2_c815	positive regulation of growth rate	other biological processes	P	Innexin-3 (Protein opu-3)
ruditapes2_c815	growth	other biological processes	P	Innexin-3 (Protein opu-3)
ruditapes2_c815	transport	transport	P	Innexin-3 (Protein opu-3)
ruditapes2_c815	reproduction	other biological processes	P	Innexin-3 (Protein opu-3)
ruditapes2_c815	locomotion	other biological processes	P	Innexin-3 (Protein opu-3)
ruditapes_c26270	DNA repair	stress response	P	Putative DNA ligase 052L (EC 6.5.1.2)
ruditapes_c26270	DNA repair	DNA metabolism	P	Putative DNA ligase 052L (EC 6.5.1.2)
ruditapes_c26270	DNA replication	DNA metabolism	P	Putative DNA ligase 052L (EC 6.5.1.2)
ruditapes_c17804	transport	transport	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	meiotic prophase I	cell cycle and proliferation	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	nuclear import	transport	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	gamete generation	other biological processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	oogenesis	other biological processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	protein transport	transport	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	feminization of hermaphroditic germ-line	developmental processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	protein import into nucleus	transport	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	embryonic development ending in birth or egg hatching	developmental processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	nuclear pore organization	cell organization and biogenesis	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	RNA interference	other metabolic processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	nematode larval development	developmental processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	germ cell development	other biological processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	meiosis	cell cycle and proliferation	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	female gamete generation	other biological processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	growth	other biological processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	locomotion	other biological processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	multicellular organismal development	developmental processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17804	reproduction	other biological processes	P	Importin subunit alpha-3 (Karyopherin subunit alpha-3)
ruditapes_c17585	gluconeogenesis	other metabolic processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	steroid metabolic process	other metabolic processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	urate metabolic process	other metabolic processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	glucose-6-phosphate transport	transport	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	triglyceride metabolic process	other metabolic processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	glucose homeostasis	other biological processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	glycogen catabolic process	other metabolic processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	cholesterol homeostasis	other biological processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	multicellular organism growth	other biological processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	dephosphorylation	other metabolic processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	glycogen metabolic process	other metabolic processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	glucose 6-phosphate metabolic process	other metabolic processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	regulation of gene expression	other metabolic processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c17585	metabolic process	other metabolic processes	P	Glucose-6-phosphatase (G-6-Pase) (G6Pase) (EC 3.1.3.9)
ruditapes_c4015	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit H (EC 1.6.99.5) (NADH dehydrogenase I subunit H) (NDH-1 subunit H)
ruditapes_c29773	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c29773	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c29773	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c29773	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c29773	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_lrc37002	ATP catabolic process	other metabolic processes	P	Phosphate import ATP-binding protein PstB (EC 3.6.3.27) (ABC phosphate transporter) (Phosphate-transporting ATPase)
ruditapes_lrc37002	transport	transport	P	Phosphate import ATP-binding protein PstB (EC 3.6.3.27) (ABC phosphate transporter) (Phosphate-transporting ATPase)
ruditapes_lrc37002	phosphate transport	transport	P	Phosphate import ATP-binding protein PstB (EC 3.6.3.27) (ABC phosphate transporter) (Phosphate-transporting ATPase)
ruditapes_c12128	translation	protein metabolism	P	50S ribosomal protein L31
ruditapes_c26812	translation	protein metabolism	P	50S ribosomal protein L31
ruditapes_c19088	proteasomal protein catabolic process	protein metabolism	P	Proteasome subunit beta (EC 3.4.25.1) (20S proteasome beta subunit) (Proteasome core protein PrcB)
ruditapes_c19088	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta (EC 3.4.25.1) (20S proteasome beta subunit) (Proteasome core protein PrcB)
ruditapes_c19088	proteolysis	protein metabolism	P	Proteasome subunit beta (EC 3.4.25.1) (20S proteasome beta subunit) (Proteasome core protein PrcB)
ruditapes2_c3373	transport	transport	P	Aliphatic sulfonates import ATP-binding protein SsuB (EC 3.6.3.-)
ruditapes2_c3373	ATP catabolic process	other metabolic processes	P	Aliphatic sulfonates import ATP-binding protein SsuB (EC 3.6.3.-)
ruditapes_c11605	transport	transport	P	Macrolide export ATP-binding/permease protein MacB 2 (EC 3.6.3.-)
ruditapes_c11605	ATP catabolic process	other metabolic processes	P	Macrolide export ATP-binding/permease protein MacB 2 (EC 3.6.3.-)
ruditapes_c11605	response to antibiotic	other biological processes	P	Macrolide export ATP-binding/permease protein MacB 2 (EC 3.6.3.-)
ruditapes_c20556	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimM
ruditapes_c20556	rRNA processing	RNA metabolism	P	Ribosome maturation factor RimM
ruditapes_c27269	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c27269	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c27269	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c27269	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes2_c2938	tryptophan catabolic process to kynurenine	other metabolic processes	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes2_c2938	oxidation reduction	other metabolic processes	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes2_c2938	tryptophan catabolic process	other metabolic processes	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes2_c2938	protein homotetramerization	cell organization and biogenesis	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes_c20318	thiamin biosynthetic process	other metabolic processes	P	Thiazole synthase (EC 2.8.1.10)
ruditapes_c8796	protein catabolic process	protein metabolism	P	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase)
ruditapes_c20368	meiosis	cell cycle and proliferation	P	Nitrogen permease regulator 3 (Required for meiotic nuclear division protein 11)
ruditapes_c11138	ribosome biogenesis	other biological processes	P	ATP-dependent RNA helicase DBP9 (EC 3.6.4.13)
ruditapes_c11138	rRNA processing	RNA metabolism	P	ATP-dependent RNA helicase DBP9 (EC 3.6.4.13)
ruditapes_c15002	lipid metabolic process	other metabolic processes	P	Patatin-like phospholipase domain-containing protein CIMG
ruditapes_c15002	lipid catabolic process	other metabolic processes	P	Patatin-like phospholipase domain-containing protein CIMG
ruditapes_c15002	metabolic process	other metabolic processes	P	Patatin-like phospholipase domain-containing protein CIMG
ruditapes2_c2364	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 5 (Mediator complex subunit 5)
ruditapes2_c2364	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 5 (Mediator complex subunit 5)
ruditapes_lrc12230	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 5 (Mediator complex subunit 5)
ruditapes2_c2364	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 5 (Mediator complex subunit 5)
ruditapes_lrc12230	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 5 (Mediator complex subunit 5)
ruditapes_lrc12230	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 5 (Mediator complex subunit 5)
ruditapes_c14583	oxidation reduction	other metabolic processes	P	tRNA-dihydrouridine(47) synthase [NAD(P)(+)] (EC 1.3.1.89) (tRNA-dihydrouridine synthase 3)
ruditapes_c14583	tRNA processing	RNA metabolism	P	tRNA-dihydrouridine(47) synthase [NAD(P)(+)] (EC 1.3.1.89) (tRNA-dihydrouridine synthase 3)
ruditapes_s40046	protein polymerization	cell organization and biogenesis	P	Protein DML1
ruditapes2_c1633	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase BUD32 (EC 2.7.11.1)
ruditapes2_c1633	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Serine/threonine-protein kinase BUD32 (EC 2.7.11.1)
ruditapes2_c1633	"transcription, DNA-dependent"	RNA metabolism	P	Serine/threonine-protein kinase BUD32 (EC 2.7.11.1)
ruditapes2_c1633	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase BUD32 (EC 2.7.11.1)
ruditapes_c19851	regulation of actin filament polymerization	protein metabolism	P	Actin-related protein 2/3 complex subunit 3 (Actin-related protein C3) (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c19851	regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 3 (Actin-related protein C3) (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c19851	actin filament organization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 3 (Actin-related protein C3) (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c20293	protein modification process	protein metabolism	P	Tubulin monoglycylase TTLL3 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 3)
ruditapes_c20293	cilium assembly	cell organization and biogenesis	P	Tubulin monoglycylase TTLL3 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 3)
ruditapes_c20293	axoneme assembly	cell organization and biogenesis	P	Tubulin monoglycylase TTLL3 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 3)
ruditapes_c12642	protein polyglycylation	protein metabolism	P	Tubulin monoglycylase TTLL3 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 3)
ruditapes_c12642	cilium assembly	cell organization and biogenesis	P	Tubulin monoglycylase TTLL3 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 3)
ruditapes_c12642	axoneme assembly	cell organization and biogenesis	P	Tubulin monoglycylase TTLL3 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 3)
ruditapes_c12642	protein modification process	protein metabolism	P	Tubulin monoglycylase TTLL3 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 3)
ruditapes_c12642	cilium axoneme assembly	cell organization and biogenesis	P	Tubulin monoglycylase TTLL3 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 3)
ruditapes_c20293	protein polyglycylation	protein metabolism	P	Tubulin monoglycylase TTLL3 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 3)
ruditapes_c20293	cilium axoneme assembly	cell organization and biogenesis	P	Tubulin monoglycylase TTLL3 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 3)
ruditapes_c15564	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase tousled-like 2 (EC 2.7.11.1) (PKU-alpha) (Tousled-like kinase 2)
ruditapes_c15564	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase tousled-like 2 (EC 2.7.11.1) (PKU-alpha) (Tousled-like kinase 2)
ruditapes_s35104	cell adhesion	cell adhesion	P	Nuclear receptor 2C2-associated protein (TR4 orphan receptor-associated 16 kDa protein homolog)
ruditapes_lrc38519	proteolysis	protein metabolism	P	A disintegrin and metalloproteinase with thrombospondin motifs 7 (ADAM-TS 7) (ADAM-TS7) (ADAMTS-7) (EC 3.4.24.-) (COMPase)
ruditapes_lrc38462	proteolysis	protein metabolism	P	A disintegrin and metalloproteinase with thrombospondin motifs 7 (ADAM-TS 7) (ADAM-TS7) (ADAMTS-7) (EC 3.4.24.-) (COMPase)
ruditapes_lrc35804	proteolysis	protein metabolism	P	A disintegrin and metalloproteinase with thrombospondin motifs 7 (ADAM-TS 7) (ADAM-TS7) (ADAMTS-7) (EC 3.4.24.-) (COMPase)
ruditapes2_c4600	proteolysis	protein metabolism	P	A disintegrin and metalloproteinase with thrombospondin motifs 7 (ADAM-TS 7) (ADAM-TS7) (ADAMTS-7) (EC 3.4.24.-) (COMPase)
ruditapes_c4969	proteolysis	protein metabolism	P	A disintegrin and metalloproteinase with thrombospondin motifs 7 (ADAM-TS 7) (ADAM-TS7) (ADAMTS-7) (EC 3.4.24.-) (COMPase)
ruditapes2_lrc6315	proteolysis	protein metabolism	P	A disintegrin and metalloproteinase with thrombospondin motifs 7 (ADAM-TS 7) (ADAM-TS7) (ADAMTS-7) (EC 3.4.24.-) (COMPase)
ruditapes_lrc35473	proteolysis	protein metabolism	P	A disintegrin and metalloproteinase with thrombospondin motifs 7 (ADAM-TS 7) (ADAM-TS7) (ADAMTS-7) (EC 3.4.24.-) (COMPase)
ruditapes_c2993	response to oxidative stress	stress response	P	Peroxidasin homolog (EC 1.11.1.7)
ruditapes_c2993	oxidation reduction	other metabolic processes	P	Peroxidasin homolog (EC 1.11.1.7)
ruditapes_c2993	hydrogen peroxide catabolic process	stress response	P	Peroxidasin homolog (EC 1.11.1.7)
ruditapes_c2993	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidasin homolog (EC 1.11.1.7)
ruditapes_c9666	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_c9666	tricarboxylic acid cycle	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes2_c671	carbohydrate metabolic process	other metabolic processes	P	Probable transaldolase (EC 2.2.1.2)
ruditapes2_c671	pentose-phosphate shunt	other metabolic processes	P	Probable transaldolase (EC 2.2.1.2)
ruditapes_c20981	tryptophan catabolic process	other metabolic processes	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes_c20981	tryptophan catabolic process to kynurenine	other metabolic processes	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes_c20981	oxidation reduction	other metabolic processes	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes_c20981	protein homotetramerization	cell organization and biogenesis	P	"Tryptophan 2,3-dioxygenase (TDO) (EC 1.13.11.11) (Tryptamin 2,3-dioxygenase) (Tryptophan oxygenase) (TO) (TRPO) (Tryptophan pyrrolase) (Tryptophanase)"
ruditapes_c25788	cobalamin biosynthetic process	other metabolic processes	P	Cobyric acid synthase
ruditapes_c25788	glutamine metabolic process	other metabolic processes	P	Cobyric acid synthase
ruditapes_c13351	carbohydrate transport	transport	P	Ribose import ATP-binding protein RbsA (EC 3.6.3.17)
ruditapes_c13351	transport	transport	P	Ribose import ATP-binding protein RbsA (EC 3.6.3.17)
ruditapes_c13351	ATP catabolic process	other metabolic processes	P	Ribose import ATP-binding protein RbsA (EC 3.6.3.17)
ruditapes_c20411	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase)
ruditapes_c20411	cellular amino acid biosynthetic process	other metabolic processes	P	3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase)
ruditapes_lrc35084	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc34908	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc25909	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc25909	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc32956	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes2_lrc4944	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes2_lrc4944	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc32318	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc34908	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc32318	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc25909	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc35084	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc34908	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc32318	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes2_lrc4944	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc32956	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc34908	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc35084	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes2_lrc4944	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc32318	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc25909	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc32956	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc32956	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_lrc35084	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c18918	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c18918	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c20360	response to DNA damage stimulus	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c20360	DNA recombination	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c20360	DNA repair	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c20360	DNA repair	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c26083	RNA processing	RNA metabolism	P	Ribonuclease PH (RNase PH) (EC 2.7.7.56) (tRNA nucleotidyltransferase)
ruditapes_c26083	tRNA processing	RNA metabolism	P	Ribonuclease PH (RNase PH) (EC 2.7.7.56) (tRNA nucleotidyltransferase)
ruditapes_c6014	ubiquinone biosynthetic process	other metabolic processes	P	4-hydroxybenzoate octaprenyltransferase (EC 2.5.1.-) (4-HB polyprenyltransferase)
ruditapes_c6014	biosynthetic process	other metabolic processes	P	4-hydroxybenzoate octaprenyltransferase (EC 2.5.1.-) (4-HB polyprenyltransferase)
ruditapes_c10083	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c10083	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c10083	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c10083	RNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c20878	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (Acyl-PO4 G3P acyltransferase) (Acyl-phosphate--glycerol-3-phosphate acyltransferase) (G3P acyltransferase) (GPAT) (EC 2.3.1.n3) (Lysophosphatidic acid synthase) (LPA synthase)
ruditapes_c17149	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c17149	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c17149	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c17149	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c21215	tRNA processing	RNA metabolism	P	tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase)
ruditapes_c22718	tRNA processing	RNA metabolism	P	tRNA 2-thiocytidine biosynthesis protein TtcA
ruditapes_c13307	glycine catabolic process	other metabolic processes	P	Glycine cleavage system H protein
ruditapes_c13307	glycine decarboxylation via glycine cleavage system	other metabolic processes	P	Glycine cleavage system H protein
ruditapes_c11378	regulation of transmembrane ion transport	transport	P	"Outer envelope pore protein 24A, chloroplastic (Chloroplastic outer envelope pore protein of 24 kDa A)"
ruditapes_c11378	biological_process	other biological processes	P	"Outer envelope pore protein 24A, chloroplastic (Chloroplastic outer envelope pore protein of 24 kDa A)"
ruditapes_c29610	glucan catabolic process	other metabolic processes	P	"Endo-beta-1,4-glucanase B (Endoglucanase B) (EC 3.2.1.4) (Carboxymethylcellulase B) (Cellulase B)"
ruditapes_c29610	cellulose catabolic process	other metabolic processes	P	"Endo-beta-1,4-glucanase B (Endoglucanase B) (EC 3.2.1.4) (Carboxymethylcellulase B) (Cellulase B)"
ruditapes_c29610	metabolic process	other metabolic processes	P	"Endo-beta-1,4-glucanase B (Endoglucanase B) (EC 3.2.1.4) (Carboxymethylcellulase B) (Cellulase B)"
ruditapes_c29610	carbohydrate metabolic process	other metabolic processes	P	"Endo-beta-1,4-glucanase B (Endoglucanase B) (EC 3.2.1.4) (Carboxymethylcellulase B) (Cellulase B)"
ruditapes_c29610	polysaccharide catabolic process	other metabolic processes	P	"Endo-beta-1,4-glucanase B (Endoglucanase B) (EC 3.2.1.4) (Carboxymethylcellulase B) (Cellulase B)"
ruditapes2_c575	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
ruditapes_s36972	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
ruditapes2_c575	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
ruditapes2_c16	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
ruditapes2_c16	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
ruditapes_s36972	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
ruditapes_s36972	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
ruditapes2_c575	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
ruditapes2_c16	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
ruditapes_c29263	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c29263	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c29263	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c26041	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c26041	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c26041	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c31191	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
ruditapes_c31191	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
ruditapes_c31191	transport	transport	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
ruditapes_c31191	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
ruditapes_c31191	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH dehydrogenase subunit 4)
ruditapes2_lrc5556	translation	protein metabolism	P	40S ribosomal protein S14
ruditapes2_lrc4896	biological_process	other biological processes	P	40S ribosomal protein S14
ruditapes2_lrc4878	translation	protein metabolism	P	40S ribosomal protein S14
ruditapes2_lrc4570	biological_process	other biological processes	P	40S ribosomal protein S14
ruditapes2_lrc4896	translation	protein metabolism	P	40S ribosomal protein S14
ruditapes2_lrc5556	biological_process	other biological processes	P	40S ribosomal protein S14
ruditapes2_lrc4570	translation	protein metabolism	P	40S ribosomal protein S14
ruditapes2_lrc4878	biological_process	other biological processes	P	40S ribosomal protein S14
ruditapes2_c2804	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase M (EC 2.1.1.186) (23S rRNA (cytidine2498-2'-O)-methyltransferase) (23S rRNA 2'-O-ribose methyltransferase RlmM)
ruditapes2_c2804	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase M (EC 2.1.1.186) (23S rRNA (cytidine2498-2'-O)-methyltransferase) (23S rRNA 2'-O-ribose methyltransferase RlmM)
ruditapes_c20632	cellular amino acid biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c20632	aromatic amino acid family biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c21660	GTP catabolic process	other metabolic processes	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c21660	tRNA modification	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c21660	tRNA processing	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c23390	response to stress	stress response	P	Lon protease (EC 3.4.21.53) (ATP-dependent protease La)
ruditapes_c23390	proteolysis	protein metabolism	P	Lon protease (EC 3.4.21.53) (ATP-dependent protease La)
ruditapes_c4538	phosphorylation	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_c4538	metabolic process	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_lrc27802	phospholipid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_lrc27802	fatty acid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_lrc23421	tRNA modification	RNA metabolism	P	Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-)
ruditapes_lrc23421	tRNA aminoacylation	RNA metabolism	P	Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-)
ruditapes_lrc23421	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-)
ruditapes_lrc23421	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-)
ruditapes_s38568	NADP metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38568	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc38190	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_c2560	NADP metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc38190	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_c2560	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_c2560	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_c2560	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc38190	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc38190	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c13922	NADP metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc38190	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c13922	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38568	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38568	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38568	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c13922	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c13922	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38568	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_c2560	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38568	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_c2560	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c13922	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_c2560	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c13922	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc38190	NADP metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc38190	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_c2560	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c13922	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38568	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c13922	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc38190	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c9860	lipid catabolic process	other metabolic processes	P	Neutral cholesterol ester hydrolase 1 (NCEH) (EC 3.1.1.-) (Arylacetamide deacetylase-like 1)
ruditapes_c18889	xenobiotic metabolic process	other metabolic processes	P	Neutral cholesterol ester hydrolase 1 (NCEH) (EC 3.1.1.-) (Arylacetamide deacetylase-like 1)
ruditapes_c9860	xenobiotic metabolic process	other metabolic processes	P	Neutral cholesterol ester hydrolase 1 (NCEH) (EC 3.1.1.-) (Arylacetamide deacetylase-like 1)
ruditapes_c18889	lipid catabolic process	other metabolic processes	P	Neutral cholesterol ester hydrolase 1 (NCEH) (EC 3.1.1.-) (Arylacetamide deacetylase-like 1)
ruditapes_c18889	protein amino acid dephosphorylation	protein metabolism	P	Neutral cholesterol ester hydrolase 1 (NCEH) (EC 3.1.1.-) (Arylacetamide deacetylase-like 1)
ruditapes_c9860	metabolic process	other metabolic processes	P	Neutral cholesterol ester hydrolase 1 (NCEH) (EC 3.1.1.-) (Arylacetamide deacetylase-like 1)
ruditapes_c9860	protein amino acid dephosphorylation	protein metabolism	P	Neutral cholesterol ester hydrolase 1 (NCEH) (EC 3.1.1.-) (Arylacetamide deacetylase-like 1)
ruditapes_c18889	metabolic process	other metabolic processes	P	Neutral cholesterol ester hydrolase 1 (NCEH) (EC 3.1.1.-) (Arylacetamide deacetylase-like 1)
ruditapes2_c2750	proteolysis	protein metabolism	P	Probable zinc metalloprotease NCU04133 (EC 3.4.-.-)
ruditapes_lrc27375	chlorophyll biosynthetic process	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_lrc27375	pigment biosynthetic process	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_lrc27375	photosynthesis	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_lrc27375	oxidation reduction	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_lrc27375	"photosynthesis, dark reaction"	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c10330	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_lrc32929	protein autoubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase RNF138 (EC 6.3.2.-) (Nemo-like kinase-associated RING finger protein) (NLK-associated RING finger protein) (xNARF) (RING finger protein 138)
ruditapes_lrc32929	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RNF138 (EC 6.3.2.-) (Nemo-like kinase-associated RING finger protein) (NLK-associated RING finger protein) (xNARF) (RING finger protein 138)
ruditapes_lrc33598	Wnt receptor signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase RNF138 (EC 6.3.2.-) (Nemo-like kinase-associated RING finger protein) (NLK-associated RING finger protein) (xNARF) (RING finger protein 138)
ruditapes_lrc33598	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase RNF138 (EC 6.3.2.-) (Nemo-like kinase-associated RING finger protein) (NLK-associated RING finger protein) (xNARF) (RING finger protein 138)
ruditapes_lrc33598	protein autoubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase RNF138 (EC 6.3.2.-) (Nemo-like kinase-associated RING finger protein) (NLK-associated RING finger protein) (xNARF) (RING finger protein 138)
ruditapes_lrc32929	Wnt receptor signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase RNF138 (EC 6.3.2.-) (Nemo-like kinase-associated RING finger protein) (NLK-associated RING finger protein) (xNARF) (RING finger protein 138)
ruditapes_c3805	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c3805	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c3805	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c3805	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c3805	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c8637	transport	transport	P	Cytochrome c biogenesis ATP-binding export protein CcmA 1 (EC 3.6.3.41) (Heme exporter protein A 1)
ruditapes_c8637	ATP catabolic process	other metabolic processes	P	Cytochrome c biogenesis ATP-binding export protein CcmA 1 (EC 3.6.3.41) (Heme exporter protein A 1)
ruditapes_c8637	cytochrome complex assembly	cell organization and biogenesis	P	Cytochrome c biogenesis ATP-binding export protein CcmA 1 (EC 3.6.3.41) (Heme exporter protein A 1)
ruditapes_c826	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase)
ruditapes_c11424	terpenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c11424	phosphorylation	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c11424	isoprenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c16676	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c16676	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c16676	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes2_c1063	translation	protein metabolism	P	50S ribosomal protein L10
ruditapes2_c1063	ribosome biogenesis	other biological processes	P	50S ribosomal protein L10
ruditapes_lrc35436	translation	protein metabolism	P	50S ribosomal protein L20
ruditapes_c30695	DNA repair	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c30695	DNA repair	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c30695	response to DNA damage stimulus	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c30695	DNA recombination	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c22670	phosphorylation	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c22670	terpenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c22670	isoprenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c29928	cellular amino acid biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c29928	cysteine biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c29928	oxidation reduction	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c14882	translation	protein metabolism	P	Glycine--tRNA ligase alpha subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase alpha subunit) (GlyRS)
ruditapes_c14882	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase alpha subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase alpha subunit) (GlyRS)
ruditapes_c14882	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase alpha subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase alpha subunit) (GlyRS)
ruditapes_c11468	arginyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c11468	arginyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c11468	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c11468	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c11468	translation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c17134	tRNA wobble uridine modification	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c17134	tRNA processing	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes2_c2116	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes2_c2116	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes2_c2116	cellular metabolic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes2_c2116	terpenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes2_c4364	biological_process	other biological processes	P	Protein QIL1
ruditapes_c28747	filopodium assembly	cell organization and biogenesis	P	Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 (BAI1-associated protein 2-like protein 2)
ruditapes_c28747	signal transduction	signal transduction	P	Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 (BAI1-associated protein 2-like protein 2)
ruditapes_c35062	translation	protein metabolism	P	"39S ribosomal protein L36, mitochondrial (L36mt) (MRP-L36)"
ruditapes_c7311	double-strand break repair via homologous recombination	stress response	P	Fanconi-associated nuclease 1 (EC 3.1.21.-) (EC 3.1.4.1) (FANCD2/FANCI-associated nuclease 1) (Myotubularin-related protein 15)
ruditapes_c7311	double-strand break repair via homologous recombination	DNA metabolism	P	Fanconi-associated nuclease 1 (EC 3.1.21.-) (EC 3.1.4.1) (FANCD2/FANCI-associated nuclease 1) (Myotubularin-related protein 15)
ruditapes_c7311	DNA repair	stress response	P	Fanconi-associated nuclease 1 (EC 3.1.21.-) (EC 3.1.4.1) (FANCD2/FANCI-associated nuclease 1) (Myotubularin-related protein 15)
ruditapes_c7311	DNA repair	DNA metabolism	P	Fanconi-associated nuclease 1 (EC 3.1.21.-) (EC 3.1.4.1) (FANCD2/FANCI-associated nuclease 1) (Myotubularin-related protein 15)
ruditapes_c7311	response to DNA damage stimulus	stress response	P	Fanconi-associated nuclease 1 (EC 3.1.21.-) (EC 3.1.4.1) (FANCD2/FANCI-associated nuclease 1) (Myotubularin-related protein 15)
ruditapes_c7311	"nucleotide-excision repair, DNA incision"	stress response	P	Fanconi-associated nuclease 1 (EC 3.1.21.-) (EC 3.1.4.1) (FANCD2/FANCI-associated nuclease 1) (Myotubularin-related protein 15)
ruditapes_c7311	"nucleotide-excision repair, DNA incision"	DNA metabolism	P	Fanconi-associated nuclease 1 (EC 3.1.21.-) (EC 3.1.4.1) (FANCD2/FANCI-associated nuclease 1) (Myotubularin-related protein 15)
ruditapes_c7311	nucleotide-excision repair	stress response	P	Fanconi-associated nuclease 1 (EC 3.1.21.-) (EC 3.1.4.1) (FANCD2/FANCI-associated nuclease 1) (Myotubularin-related protein 15)
ruditapes_c7311	nucleotide-excision repair	DNA metabolism	P	Fanconi-associated nuclease 1 (EC 3.1.21.-) (EC 3.1.4.1) (FANCD2/FANCI-associated nuclease 1) (Myotubularin-related protein 15)
ruditapes_c4907	response to DNA damage stimulus	stress response	P	Integrator complex subunit 3 (Int3) (SOSS complex subunit A) (Sensor of single-strand DNA complex subunit A) (SOSS-A) (Sensor of ssDNA subunit A)
ruditapes_c4907	G2/M transition checkpoint	cell cycle and proliferation	P	Integrator complex subunit 3 (Int3) (SOSS complex subunit A) (Sensor of single-strand DNA complex subunit A) (SOSS-A) (Sensor of ssDNA subunit A)
ruditapes_c4907	DNA repair	stress response	P	Integrator complex subunit 3 (Int3) (SOSS complex subunit A) (Sensor of single-strand DNA complex subunit A) (SOSS-A) (Sensor of ssDNA subunit A)
ruditapes_c4907	DNA repair	DNA metabolism	P	Integrator complex subunit 3 (Int3) (SOSS complex subunit A) (Sensor of single-strand DNA complex subunit A) (SOSS-A) (Sensor of ssDNA subunit A)
ruditapes_c4907	response to ionizing radiation	other biological processes	P	Integrator complex subunit 3 (Int3) (SOSS complex subunit A) (Sensor of single-strand DNA complex subunit A) (SOSS-A) (Sensor of ssDNA subunit A)
ruditapes_c14238	negative regulation of erythrocyte differentiation	developmental processes	P	Rhombotin-2 (LIM domain only protein 2) (LMO-2)
ruditapes_c14238	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Rhombotin-2 (LIM domain only protein 2) (LMO-2)
ruditapes_c22183	proton-transporting ATP synthase complex assembly	cell organization and biogenesis	P	ATP synthase mitochondrial F1 complex assembly factor 2
ruditapes2_c2282	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Follistatin-related protein 3 (Follistatin-like protein 3)
ruditapes2_c2282	negative regulation of activin receptor signaling pathway	signal transduction	P	Follistatin-related protein 3 (Follistatin-like protein 3)
ruditapes2_c2282	positive regulation of cell-cell adhesion	cell adhesion	P	Follistatin-related protein 3 (Follistatin-like protein 3)
ruditapes2_c2282	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Follistatin-related protein 3 (Follistatin-like protein 3)
ruditapes2_c2282	negative regulation of BMP signaling pathway	signal transduction	P	Follistatin-related protein 3 (Follistatin-like protein 3)
ruditapes2_c2282	hemopoietic progenitor cell differentiation	developmental processes	P	Follistatin-related protein 3 (Follistatin-like protein 3)
ruditapes2_c2282	"transcription, DNA-dependent"	RNA metabolism	P	Follistatin-related protein 3 (Follistatin-like protein 3)
ruditapes2_c2282	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Follistatin-related protein 3 (Follistatin-like protein 3)
ruditapes2_c2282	ossification	developmental processes	P	Follistatin-related protein 3 (Follistatin-like protein 3)
ruditapes2_c2282	negative regulation of osteoclast differentiation	developmental processes	P	Follistatin-related protein 3 (Follistatin-like protein 3)
ruditapes_c7891	negative regulation of protein secretion	transport	P	DPH3 homolog (CSL-type zinc finger-containing protein 2)
ruditapes_c7891	positive regulation of binding	other biological processes	P	DPH3 homolog (CSL-type zinc finger-containing protein 2)
ruditapes_c14552	transport	transport	P	Solute carrier family 35 member F3
ruditapes_c14552	biological_process	other biological processes	P	Solute carrier family 35 member F3
ruditapes_c21848	carbohydrate metabolic process	other metabolic processes	P	Laforin (EC 3.1.3.16) (EC 3.1.3.48) (Lafora PTPase) (LAFPTPase)
ruditapes_c21848	glycogen metabolic process	other metabolic processes	P	Laforin (EC 3.1.3.16) (EC 3.1.3.48) (Lafora PTPase) (LAFPTPase)
ruditapes_c21848	JNK cascade	signal transduction	P	Laforin (EC 3.1.3.16) (EC 3.1.3.48) (Lafora PTPase) (LAFPTPase)
ruditapes_c21848	JNK cascade	stress response	P	Laforin (EC 3.1.3.16) (EC 3.1.3.48) (Lafora PTPase) (LAFPTPase)
ruditapes_c21848	dephosphorylation	other metabolic processes	P	Laforin (EC 3.1.3.16) (EC 3.1.3.48) (Lafora PTPase) (LAFPTPase)
ruditapes_c21848	protein amino acid dephosphorylation	protein metabolism	P	Laforin (EC 3.1.3.16) (EC 3.1.3.48) (Lafora PTPase) (LAFPTPase)
ruditapes_c7996	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c7996	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c7996	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c7996	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c7996	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes2_c2407	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes2_c2407	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes2_c2407	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes2_c1015	response to stress	stress response	P	Protein GrpE (HSP-70 cofactor)
ruditapes2_c1015	protein folding	protein metabolism	P	Protein GrpE (HSP-70 cofactor)
ruditapes_c26941	translation	protein metabolism	P	30S ribosomal protein S7
ruditapes_c7000	isoprenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c7000	phosphorylation	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c7000	terpenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c9392	regulation of cell shape	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c9392	peptidoglycan biosynthetic process	other metabolic processes	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c9392	cell wall organization	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c24091	tRNA processing	RNA metabolism	P	tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase)
ruditapes_c31764	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c31764	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c31764	tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c31764	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c31764	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c31764	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c3375	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c3375	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c3375	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c3375	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c3375	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c3129	glycolysis	other metabolic processes	P	Triosephosphate isomerase A (TIM-A) (EC 5.3.1.1) (Triose-phosphate isomerase A)
ruditapes_c922	glycolysis	other metabolic processes	P	Triosephosphate isomerase A (TIM-A) (EC 5.3.1.1) (Triose-phosphate isomerase A)
ruditapes_c922	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase A (TIM-A) (EC 5.3.1.1) (Triose-phosphate isomerase A)
ruditapes_c3129	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase A (TIM-A) (EC 5.3.1.1) (Triose-phosphate isomerase A)
ruditapes_c922	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase A (TIM-A) (EC 5.3.1.1) (Triose-phosphate isomerase A)
ruditapes_c922	metabolic process	other metabolic processes	P	Triosephosphate isomerase A (TIM-A) (EC 5.3.1.1) (Triose-phosphate isomerase A)
ruditapes_c3129	metabolic process	other metabolic processes	P	Triosephosphate isomerase A (TIM-A) (EC 5.3.1.1) (Triose-phosphate isomerase A)
ruditapes_c3129	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase A (TIM-A) (EC 5.3.1.1) (Triose-phosphate isomerase A)
ruditapes_s37896	RNA catabolic process	RNA metabolism	P	"Exoribonuclease II, mitochondrial (RNase II) (Ribonuclease II) (EC 3.1.13.1) (Processome-associated RNase)"
ruditapes_s37896	mitochondrial RNA 3'-end processing	RNA metabolism	P	"Exoribonuclease II, mitochondrial (RNase II) (Ribonuclease II) (EC 3.1.13.1) (Processome-associated RNase)"
ruditapes_c29822	mitotic anaphase B	cell cycle and proliferation	P	Kinesin-like motor protein 9
ruditapes_c29822	mitotic anaphase B	cell organization and biogenesis	P	Kinesin-like motor protein 9
ruditapes_c29822	microtubule sliding	other biological processes	P	Kinesin-like motor protein 9
ruditapes_c29822	spindle elongation	cell organization and biogenesis	P	Kinesin-like motor protein 9
ruditapes_c29822	microtubule-based movement	other biological processes	P	Kinesin-like motor protein 9
ruditapes_c29822	ATP catabolic process	other metabolic processes	P	Kinesin-like motor protein 9
ruditapes_c29822	spindle elongation	cell cycle and proliferation	P	Kinesin-like motor protein 9
ruditapes_c20372	establishment of mitotic spindle orientation	cell cycle and proliferation	P	Protein inscuteable homolog
ruditapes_c20372	establishment of mitotic spindle orientation	cell organization and biogenesis	P	Protein inscuteable homolog
ruditapes_c20372	nervous system development	developmental processes	P	Protein inscuteable homolog
ruditapes_c20372	multicellular organismal development	developmental processes	P	Protein inscuteable homolog
ruditapes_c20372	lung epithelial cell differentiation	developmental processes	P	Protein inscuteable homolog
ruditapes_c20372	cell differentiation	other biological processes	P	Protein inscuteable homolog
ruditapes2_c2547	alveolus development	developmental processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Lung surfactant protein D)
ruditapes2_c2547	respiratory gaseous exchange	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Lung surfactant protein D)
ruditapes2_c2547	surfactant homeostasis	other biological processes	P	Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Lung surfactant protein D)
ruditapes_c1934	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 18 (EC 2.7.11.1)
ruditapes_c1934	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 18 (EC 2.7.11.1)
ruditapes_c13997	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein RABA1h (AtRABA1h)
ruditapes_c13997	transport	transport	P	Ras-related protein RABA1h (AtRABA1h)
ruditapes_c13997	protein transport	transport	P	Ras-related protein RABA1h (AtRABA1h)
ruditapes_c4805	fatty acid catabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c4805	metabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c4805	lipid catabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c4805	lipid metabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c4805	fatty acid metabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c4805	oxidation reduction	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3) (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c9992	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c9992	cell division	other biological processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c9992	oxidation reduction	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c9992	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c9992	cell cycle	cell cycle and proliferation	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c9992	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c13942	translation	protein metabolism	P	50S ribosomal protein L24
ruditapes_c14993	biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c14993	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c14993	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_s36294	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_s36294	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes2_lrc4339	dicarboxylic acid transport	transport	P	Serine/threonine transporter SstT (Na(+)/serine-threonine symporter)
ruditapes2_lrc4339	amino acid transport	transport	P	Serine/threonine transporter SstT (Na(+)/serine-threonine symporter)
ruditapes2_lrc4339	transport	transport	P	Serine/threonine transporter SstT (Na(+)/serine-threonine symporter)
ruditapes_c21232	arginine metabolic process	other metabolic processes	P	N-succinylarginine dihydrolase (EC 3.5.3.23)
ruditapes_c21809	RNA processing	RNA metabolism	P	Ribonuclease T (EC 3.1.13.-) (Exoribonuclease T) (RNase T)
ruditapes_c21809	tRNA processing	RNA metabolism	P	Ribonuclease T (EC 3.1.13.-) (Exoribonuclease T) (RNase T)
ruditapes_c11164	oxidation reduction	other metabolic processes	P	Soluble pyridine nucleotide transhydrogenase (STH) (EC 1.6.1.1) (NAD(P)(+) transhydrogenase [B-specific])
ruditapes_c11164	cell redox homeostasis	other biological processes	P	Soluble pyridine nucleotide transhydrogenase (STH) (EC 1.6.1.1) (NAD(P)(+) transhydrogenase [B-specific])
ruditapes_c24236	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c24236	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c26924	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Uridylate kinase (UK) (EC 2.7.4.22) (Uridine monophosphate kinase) (UMP kinase) (UMPK)
ruditapes_c26924	cellular amino acid biosynthetic process	other metabolic processes	P	Uridylate kinase (UK) (EC 2.7.4.22) (Uridine monophosphate kinase) (UMP kinase) (UMPK)
ruditapes_c26924	phosphorylation	other metabolic processes	P	Uridylate kinase (UK) (EC 2.7.4.22) (Uridine monophosphate kinase) (UMP kinase) (UMPK)
ruditapes_c13999	tRNA seleno-modification	RNA metabolism	P	tRNA 2-selenouridine synthase (EC 2.9.1.-) (Selenophosphate-dependent tRNA 2-selenouridine synthase)
ruditapes_c19664	carbohydrate metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes_c19664	cellular metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes_c24923	protein catabolic process	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-)
ruditapes_c24923	proteolysis	protein metabolism	P	ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-)
ruditapes_c11460	tRNA wobble uridine modification	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c11460	tRNA processing	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c18237	biosynthetic process	other metabolic processes	P	Aspartate aminotransferase (AspAT) (EC 2.6.1.1) (Transaminase A)
ruditapes_c18237	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	Aspartate aminotransferase (AspAT) (EC 2.6.1.1) (Transaminase A)
ruditapes_c20163	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c20163	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c20163	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c24603	tRNA modification	RNA metabolism	P	Bifunctional methyltransferase [Includes: Release factor glutamine methyltransferase (RF MTase) (EC 2.1.1.n16) (N5-glutamine methyltransferase PrmC) (Protein-(glutamine-N5) MTase PrmC) (Protein-glutamine N-methyltransferase PrmC); tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)]
ruditapes_c24603	protein amino acid methylation	protein metabolism	P	Bifunctional methyltransferase [Includes: Release factor glutamine methyltransferase (RF MTase) (EC 2.1.1.n16) (N5-glutamine methyltransferase PrmC) (Protein-(glutamine-N5) MTase PrmC) (Protein-glutamine N-methyltransferase PrmC); tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)]
ruditapes_c24603	methylation	other metabolic processes	P	Bifunctional methyltransferase [Includes: Release factor glutamine methyltransferase (RF MTase) (EC 2.1.1.n16) (N5-glutamine methyltransferase PrmC) (Protein-(glutamine-N5) MTase PrmC) (Protein-glutamine N-methyltransferase PrmC); tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)]
ruditapes_c24603	tRNA processing	RNA metabolism	P	Bifunctional methyltransferase [Includes: Release factor glutamine methyltransferase (RF MTase) (EC 2.1.1.n16) (N5-glutamine methyltransferase PrmC) (Protein-(glutamine-N5) MTase PrmC) (Protein-glutamine N-methyltransferase PrmC); tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)]
ruditapes_s35494	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_s39199	translation	protein metabolism	P	50S ribosomal protein L29
ruditapes_c7759	protein transport	transport	P	Protein translocase subunit SecY
ruditapes_c7759	transport	transport	P	Protein translocase subunit SecY
ruditapes_c14339	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c14339	phosphatidylethanolamine biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c20116	cell division	other biological processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c20116	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c20116	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c20116	oxidation reduction	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c20116	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c20116	cell cycle	cell cycle and proliferation	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c18267	transmembrane transport	transport	P	Putative transporter AmpG 4
ruditapes_c18267	transport	transport	P	Putative transporter AmpG 4
ruditapes_lrc20408	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_lrc20408	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_lrc20408	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_lrc20408	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_lrc20408	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c7361	ATP catabolic process	other metabolic processes	P	ATP-dependent protease ATPase subunit HslU (Unfoldase HslU)
ruditapes_lrc21456	cellular protein metabolic process	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes2_lrc3499	cellular protein metabolic process	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes2_lrc3499	protein folding	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes_lrc21456	protein folding	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes_lrc21456	protein refolding	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes2_lrc3499	protein refolding	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes_c21662	cell division	other biological processes	P	DNA translocase FtsK
ruditapes_c21662	cell cycle	cell cycle and proliferation	P	DNA translocase FtsK
ruditapes_c21662	chromosome segregation	other biological processes	P	DNA translocase FtsK
ruditapes2_lrc4746	telomere maintenance via recombination	DNA metabolism	P	ATP-dependent DNA helicase tlh2 (EC 3.6.4.12) (Sub-telomeric helicase RecQ homolog 2)
ruditapes2_lrc4746	telomere maintenance via recombination	cell organization and biogenesis	P	ATP-dependent DNA helicase tlh2 (EC 3.6.4.12) (Sub-telomeric helicase RecQ homolog 2)
ruditapes2_lrc4798	telomere maintenance via recombination	DNA metabolism	P	ATP-dependent DNA helicase tlh2 (EC 3.6.4.12) (Sub-telomeric helicase RecQ homolog 2)
ruditapes2_lrc4798	telomere maintenance via recombination	cell organization and biogenesis	P	ATP-dependent DNA helicase tlh2 (EC 3.6.4.12) (Sub-telomeric helicase RecQ homolog 2)
ruditapes2_lrc4746	DNA recombination	DNA metabolism	P	ATP-dependent DNA helicase tlh2 (EC 3.6.4.12) (Sub-telomeric helicase RecQ homolog 2)
ruditapes2_lrc4798	DNA recombination	DNA metabolism	P	ATP-dependent DNA helicase tlh2 (EC 3.6.4.12) (Sub-telomeric helicase RecQ homolog 2)
ruditapes_c23021	Wnt receptor signaling pathway	signal transduction	P	R-spondin-3 (Roof plate-specific spondin-3)
ruditapes_c23021	response to stimulus	other biological processes	P	R-spondin-3 (Roof plate-specific spondin-3)
ruditapes_c29580	cell adhesion	cell adhesion	P	Cell adhesion molecule 3 (Immunoglobulin superfamily member 4B) (IgSF4B) (Nectin-like protein 1) (NECL-1)
ruditapes_c29580	heterophilic cell adhesion	cell adhesion	P	Cell adhesion molecule 3 (Immunoglobulin superfamily member 4B) (IgSF4B) (Nectin-like protein 1) (NECL-1)
ruditapes_c29580	protein localization	other biological processes	P	Cell adhesion molecule 3 (Immunoglobulin superfamily member 4B) (IgSF4B) (Nectin-like protein 1) (NECL-1)
ruditapes_c29580	homophilic cell adhesion	cell adhesion	P	Cell adhesion molecule 3 (Immunoglobulin superfamily member 4B) (IgSF4B) (Nectin-like protein 1) (NECL-1)
ruditapes_c2525	oxidation reduction	other metabolic processes	P	Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
ruditapes_c2525	metabolic process	other metabolic processes	P	Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
ruditapes_c21115	tRNA aminoacylation for protein translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c21115	tRNA aminoacylation for protein translation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c21115	translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c21115	tyrosyl-tRNA aminoacylation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c21115	tyrosyl-tRNA aminoacylation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_s35196	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_s35196	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c28042	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c28042	DNA repair	stress response	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c28042	DNA repair	DNA metabolism	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c28042	response to DNA damage stimulus	stress response	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c28042	DNA recombination	DNA metabolism	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c21031	cell cycle	cell cycle and proliferation	P	Segregation and condensation protein A
ruditapes_c21031	chromosome segregation	other biological processes	P	Segregation and condensation protein A
ruditapes_c21031	cell division	other biological processes	P	Segregation and condensation protein A
ruditapes_c15388	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 2 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase II) (FGAM synthase II)
ruditapes_c15388	'de novo' IMP biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 2 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase II) (FGAM synthase II)
ruditapes_c15699	phosphorylation	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c15699	isoprenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c15699	terpenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c23324	methylation	other metabolic processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c23324	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c23324	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c23324	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c23324	viral infectious cycle	other biological processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c23324	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c23324	RNA metabolic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c23324	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c23324	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c23324	metabolic process	other metabolic processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c23324	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c23324	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha (NS2A-alpha); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c12030	"transcription, DNA-dependent"	RNA metabolism	P	Putative DNA-directed RNA polymerase subunit omega (PEP) (EC 2.7.7.6) (Plastid-encoded RNA polymerase omega subunit) (RNA polymerase omega subunit)
ruditapes2_c1522	translation	protein metabolism	P	"50S ribosomal protein L4, chloroplastic"
ruditapes_c4442	translational initiation	protein metabolism	P	"Translation initiation factor IF-2, chloroplastic"
ruditapes_c4442	GTP catabolic process	other metabolic processes	P	"Translation initiation factor IF-2, chloroplastic"
ruditapes_c4395	translation	protein metabolism	P	"Translation initiation factor IF-2, chloroplastic"
ruditapes_c4395	GTP catabolic process	other metabolic processes	P	"Translation initiation factor IF-2, chloroplastic"
ruditapes_c4395	translational initiation	protein metabolism	P	"Translation initiation factor IF-2, chloroplastic"
ruditapes_c4442	translation	protein metabolism	P	"Translation initiation factor IF-2, chloroplastic"
ruditapes_c26641	translation	protein metabolism	P	"30S ribosomal protein S18, chloroplastic"
ruditapes2_c2575	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta)
ruditapes_c21655	ion transport	transport	P	"ATP synthase subunit b', chloroplastic (ATP synthase F(0) sector subunit b') (ATPase subunit II)"
ruditapes_c21655	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit b', chloroplastic (ATP synthase F(0) sector subunit b') (ATPase subunit II)"
ruditapes_c21655	proton transport	transport	P	"ATP synthase subunit b', chloroplastic (ATP synthase F(0) sector subunit b') (ATPase subunit II)"
ruditapes_c21655	transport	transport	P	"ATP synthase subunit b', chloroplastic (ATP synthase F(0) sector subunit b') (ATPase subunit II)"
ruditapes_c21655	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b', chloroplastic (ATP synthase F(0) sector subunit b') (ATPase subunit II)"
ruditapes_c21655	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b', chloroplastic (ATP synthase F(0) sector subunit b') (ATPase subunit II)"
ruditapes_c2897	sodium ion transport	transport	P	ZAR1-like protein
ruditapes_c3280	metabolic process	other metabolic processes	P	Fumarylacetoacetase (FAA) (EC 3.7.1.2) (Beta-diketonase) (Fumarylacetoacetate hydrolase)
ruditapes_c3280	L-phenylalanine catabolic process	other metabolic processes	P	Fumarylacetoacetase (FAA) (EC 3.7.1.2) (Beta-diketonase) (Fumarylacetoacetate hydrolase)
ruditapes_c3280	aromatic amino acid family metabolic process	other metabolic processes	P	Fumarylacetoacetase (FAA) (EC 3.7.1.2) (Beta-diketonase) (Fumarylacetoacetate hydrolase)
ruditapes_c3280	tyrosine catabolic process	other metabolic processes	P	Fumarylacetoacetase (FAA) (EC 3.7.1.2) (Beta-diketonase) (Fumarylacetoacetate hydrolase)
ruditapes_c25542	microtubule cytoskeleton organization	cell organization and biogenesis	P	Centrosomal protein 224 (CP224)
ruditapes_c25542	centrosome duplication	cell cycle and proliferation	P	Centrosomal protein 224 (CP224)
ruditapes_c25542	centrosome duplication	cell organization and biogenesis	P	Centrosomal protein 224 (CP224)
ruditapes_c25542	mitosis	cell cycle and proliferation	P	Centrosomal protein 224 (CP224)
ruditapes_c25542	mitosis	cell organization and biogenesis	P	Centrosomal protein 224 (CP224)
ruditapes_c25542	cytokinesis	other biological processes	P	Centrosomal protein 224 (CP224)
ruditapes_c25542	cell division	other biological processes	P	Centrosomal protein 224 (CP224)
ruditapes_c25542	Golgi organization	cell organization and biogenesis	P	Centrosomal protein 224 (CP224)
ruditapes_c25542	cell cycle	cell cycle and proliferation	P	Centrosomal protein 224 (CP224)
ruditapes_c25542	microtubule polymerization	cell organization and biogenesis	P	Centrosomal protein 224 (CP224)
ruditapes_s35959	mitotic sister chromatid segregation	cell cycle and proliferation	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	mitotic sister chromatid segregation	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	DNA recombination	DNA metabolism	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	growth	other biological processes	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	hermaphrodite genitalia development	developmental processes	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	cytokinesis	other biological processes	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	mitosis	cell cycle and proliferation	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	mitosis	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	DNA repair	stress response	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	DNA repair	DNA metabolism	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	gamete generation	other biological processes	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	chromosome condensation	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	cell division	other biological processes	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	embryonic development ending in birth or egg hatching	developmental processes	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	chromosome organization	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	inductive cell migration	other biological processes	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	nematode larval development	developmental processes	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	cell cycle	cell cycle and proliferation	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	sister chromatid cohesion	cell cycle and proliferation	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_s35959	sister chromatid cohesion	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4)
ruditapes_c28679	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein lin-49 (Abnormal cell lineage protein 49)
ruditapes_c28679	positive regulation of growth rate	other biological processes	P	Protein lin-49 (Abnormal cell lineage protein 49)
ruditapes_c28679	"transcription, DNA-dependent"	RNA metabolism	P	Protein lin-49 (Abnormal cell lineage protein 49)
ruditapes_c28679	reproduction	other biological processes	P	Protein lin-49 (Abnormal cell lineage protein 49)
ruditapes_c28679	locomotion	other biological processes	P	Protein lin-49 (Abnormal cell lineage protein 49)
ruditapes_c10996	detection of chemical stimulus involved in sensory perception	other biological processes	P	Serpentine receptor class alpha-11 (Protein sra-11)
ruditapes_c10996	sensory perception of smell	other biological processes	P	Serpentine receptor class alpha-11 (Protein sra-11)
ruditapes_c10996	sensory perception of chemical stimulus	other biological processes	P	Serpentine receptor class alpha-11 (Protein sra-11)
ruditapes_c10996	response to stimulus	other biological processes	P	Serpentine receptor class alpha-11 (Protein sra-11)
ruditapes_c10996	olfactory learning	other biological processes	P	Serpentine receptor class alpha-11 (Protein sra-11)
ruditapes_c13154	oviposition	other biological processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	locomotion	other biological processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	positive regulation of vulval development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	morphogenesis of an epithelium	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	hermaphrodite genitalia development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	multicellular organismal development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	reproduction	other biological processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	positive regulation of growth rate	other biological processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	body morphogenesis	other biological processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	"molting cycle, collagen and cuticulin-based cuticle"	other biological processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	nematode larval development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	embryonic development ending in birth or egg hatching	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c13154	positive regulation of multicellular organism growth	other biological processes	P	Mediator of RNA polymerase II transcription subunit 12 (CeTRAP230) (Mediator complex subunit 12) (Protein dumpy-22)
ruditapes_c23605	neurotransmitter transport	transport	P	Putative syntaxin-2
ruditapes_c23605	synaptic vesicle docking during exocytosis	transport	P	Putative syntaxin-2
ruditapes_c23605	synaptic vesicle docking during exocytosis	cell-cell signaling	P	Putative syntaxin-2
ruditapes_c23605	intracellular protein transport	transport	P	Putative syntaxin-2
ruditapes_c23605	transport	transport	P	Putative syntaxin-2
ruditapes_c23605	vesicle-mediated transport	transport	P	Putative syntaxin-2
ruditapes_c18437	locomotion	other biological processes	P	Molybdenum cofactor biosynthesis protein 1 [Includes: Cyclic pyranopterin monophosphate synthase (EC 4.1.99.18) (Molybdenum cofactor biosynthesis protein A); Cyclic pyranopterin monophosphate synthase accessory protein (Molybdenum cofactor biosynthesis protein C)]
ruditapes_c18437	positive regulation of growth rate	other biological processes	P	Molybdenum cofactor biosynthesis protein 1 [Includes: Cyclic pyranopterin monophosphate synthase (EC 4.1.99.18) (Molybdenum cofactor biosynthesis protein A); Cyclic pyranopterin monophosphate synthase accessory protein (Molybdenum cofactor biosynthesis protein C)]
ruditapes_c18437	determination of adult life span	developmental processes	P	Molybdenum cofactor biosynthesis protein 1 [Includes: Cyclic pyranopterin monophosphate synthase (EC 4.1.99.18) (Molybdenum cofactor biosynthesis protein A); Cyclic pyranopterin monophosphate synthase accessory protein (Molybdenum cofactor biosynthesis protein C)]
ruditapes_c18437	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Molybdenum cofactor biosynthesis protein 1 [Includes: Cyclic pyranopterin monophosphate synthase (EC 4.1.99.18) (Molybdenum cofactor biosynthesis protein A); Cyclic pyranopterin monophosphate synthase accessory protein (Molybdenum cofactor biosynthesis protein C)]
ruditapes2_c3432	embryonic development ending in birth or egg hatching	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes2_c3432	electron transport chain	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes2_c3432	transport	transport	P	"Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes2_c3432	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes2_c3432	nematode larval development	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes2_c3432	growth	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes2_c3432	oxidation reduction	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3)"
ruditapes_c29336	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase plk-3 (EC 2.7.11.21) (Polo-like kinase 3)
ruditapes_c29336	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase plk-3 (EC 2.7.11.21) (Polo-like kinase 3)
ruditapes_c31804	transport	transport	P	Chloroplast envelope membrane protein
ruditapes_c31804	proton transport	transport	P	Chloroplast envelope membrane protein
ruditapes_c31804	ion transport	transport	P	Chloroplast envelope membrane protein
ruditapes_c25087	photosynthesis	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit N (DPOR subunit N) (LI-POR subunit N) (EC 1.18.-.-)
ruditapes_c25087	chlorophyll biosynthetic process	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit N (DPOR subunit N) (LI-POR subunit N) (EC 1.18.-.-)
ruditapes_c25087	oxidation reduction	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit N (DPOR subunit N) (LI-POR subunit N) (EC 1.18.-.-)
ruditapes_c25087	"photosynthesis, dark reaction"	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit N (DPOR subunit N) (LI-POR subunit N) (EC 1.18.-.-)
ruditapes_c13850	GTP catabolic process	other metabolic processes	P	Elongation factor G (EF-G)
ruditapes_c13850	translation	protein metabolism	P	Elongation factor G (EF-G)
ruditapes_c13850	translational elongation	protein metabolism	P	Elongation factor G (EF-G)
ruditapes_c24326	ATP catabolic process	other metabolic processes	P	Probable cation-transporting ATPase K07E3.7 (EC 3.6.3.-)
ruditapes_c24326	cation transport	transport	P	Probable cation-transporting ATPase K07E3.7 (EC 3.6.3.-)
ruditapes_c25620	determination of adult life span	developmental processes	P	Cullin-6
ruditapes_c25620	response to DNA damage stimulus	stress response	P	Cullin-6
ruditapes_c25620	positive regulation of growth rate	other biological processes	P	Cullin-6
ruditapes_c5386	growth	other biological processes	P	Cullin-6
ruditapes_c5386	positive regulation of growth rate	other biological processes	P	Cullin-6
ruditapes_c5386	determination of adult life span	developmental processes	P	Cullin-6
ruditapes_c5386	response to DNA damage stimulus	stress response	P	Cullin-6
ruditapes_c5386	ubiquitin-dependent protein catabolic process	protein metabolism	P	Cullin-6
ruditapes_c25620	embryonic development ending in birth or egg hatching	developmental processes	P	Cullin-6
ruditapes_c25620	ubiquitin-dependent protein catabolic process	protein metabolism	P	Cullin-6
ruditapes_c5386	embryonic development ending in birth or egg hatching	developmental processes	P	Cullin-6
ruditapes_c25620	growth	other biological processes	P	Cullin-6
ruditapes_s37456	biological_process	other biological processes	P	Glutathione S-transferase 4 (EC 2.5.1.18) (CeGST1) (GST class-sigma)
ruditapes2_c508	proteolysis	protein metabolism	P	Zinc metalloproteinase nas-10 (EC 3.4.24.21) (Nematode astacin 10)
ruditapes2_c1691	proteolysis	protein metabolism	P	Zinc metalloproteinase nas-10 (EC 3.4.24.21) (Nematode astacin 10)
ruditapes2_c355	proteolysis	protein metabolism	P	Zinc metalloproteinase nas-10 (EC 3.4.24.21) (Nematode astacin 10)
ruditapes_c21453	RNA interference	other metabolic processes	P	Nuclear RNAi defective-3 protein
ruditapes_c21453	RNA import into nucleus	transport	P	Nuclear RNAi defective-3 protein
ruditapes2_c2912	lipid storage	other biological processes	P	Probable glutathione S-transferase 9 (EC 2.5.1.18) (GST class-sigma)
ruditapes2_c2912	positive regulation of growth rate	other biological processes	P	Probable glutathione S-transferase 9 (EC 2.5.1.18) (GST class-sigma)
ruditapes_c26996	determination of adult life span	developmental processes	P	NAD-dependent protein deacetylase sir-2.1 (EC 3.5.1.-) (Protein sir-2.1) (Regulatory protein SIR2 homolog 1)
ruditapes_c26996	dauer larval development	developmental processes	P	NAD-dependent protein deacetylase sir-2.1 (EC 3.5.1.-) (Protein sir-2.1) (Regulatory protein SIR2 homolog 1)
ruditapes_c26996	protein amino acid deacetylation	protein metabolism	P	NAD-dependent protein deacetylase sir-2.1 (EC 3.5.1.-) (Protein sir-2.1) (Regulatory protein SIR2 homolog 1)
ruditapes_c1201	reproduction	other biological processes	P	N-terminal acetyltransferase B complex subunit NAA25 homolog (N-terminal acetyltransferase B complex subunit MDM20 homolog)
ruditapes_c1201	embryonic development ending in birth or egg hatching	developmental processes	P	N-terminal acetyltransferase B complex subunit NAA25 homolog (N-terminal acetyltransferase B complex subunit MDM20 homolog)
ruditapes_c1201	oogenesis	other biological processes	P	N-terminal acetyltransferase B complex subunit NAA25 homolog (N-terminal acetyltransferase B complex subunit MDM20 homolog)
ruditapes_c18740	ribosome biogenesis	other biological processes	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_c18740	rRNA processing	RNA metabolism	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_c29723	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c29723	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c29723	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_lrc26298	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_lrc26298	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_lrc26298	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_lrc38604	oxidation reduction	other metabolic processes	P	PKHD-type hydroxylase Sde
ruditapes_c33569	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c33569	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c33569	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c33569	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c33569	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c12842	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c12842	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c12842	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c10307	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c10307	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c10307	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c10307	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c10307	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c10307	translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c17913	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c17913	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c17913	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c17913	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c22065	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c22065	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c22065	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c30663	regulation of cell shape	cell organization and biogenesis	P	Lipid II flippase FtsW (Cell division protein FtsW)
ruditapes_c30663	cell cycle	cell cycle and proliferation	P	Lipid II flippase FtsW (Cell division protein FtsW)
ruditapes_c30663	cell wall organization	cell organization and biogenesis	P	Lipid II flippase FtsW (Cell division protein FtsW)
ruditapes_c30663	cell division	other biological processes	P	Lipid II flippase FtsW (Cell division protein FtsW)
ruditapes_c30663	transport	transport	P	Lipid II flippase FtsW (Cell division protein FtsW)
ruditapes_c30663	peptidoglycan biosynthetic process	other metabolic processes	P	Lipid II flippase FtsW (Cell division protein FtsW)
ruditapes_c13688	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c13688	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c3270	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c31384	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c3270	methylation	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c31384	methylation	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c31384	dTMP biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c3270	dTMP biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes2_c2618	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_s39147	protein folding	protein metabolism	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_s39147	response to stress	stress response	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c19585	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_lrc28357	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_lrc28357	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_lrc28357	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_lrc28357	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c26287	translation	protein metabolism	P	Ribosome-recycling factor (RRF) (Ribosome-releasing factor)
ruditapes_c11881	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c11881	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c11881	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c25432	cellular metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes_c25432	carbohydrate metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes_c14639	rRNA processing	RNA metabolism	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	ribosome biogenesis	other biological processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	cell differentiation	other biological processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	positive regulation of growth rate	other biological processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	receptor-mediated endocytosis	cell organization and biogenesis	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	nematode larval development	developmental processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	cell migration	other biological processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	growth	other biological processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	hermaphrodite genitalia development	developmental processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	germ cell development	other biological processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	receptor-mediated endocytosis	transport	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	gonad development	developmental processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	gonadal mesoderm development	developmental processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	multicellular organismal development	developmental processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	gamete generation	other biological processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c14639	reproduction	other biological processes	P	Pre-rRNA-processing protein pro-1 (Proximal proliferation in germline protein 1)
ruditapes_c28207	carbohydrate metabolic process	other metabolic processes	P	Beta-hexosaminidase A (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c28207	metabolic process	other metabolic processes	P	Beta-hexosaminidase A (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c24462	embryonic development ending in birth or egg hatching	developmental processes	P	Importin subunit alpha-1 (Karyopherin subunit alpha-1)
ruditapes_c24462	protein import into nucleus	transport	P	Importin subunit alpha-1 (Karyopherin subunit alpha-1)
ruditapes_c24462	transport	transport	P	Importin subunit alpha-1 (Karyopherin subunit alpha-1)
ruditapes_c24462	protein transport	transport	P	Importin subunit alpha-1 (Karyopherin subunit alpha-1)
ruditapes_c4465	determination of adult life span	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c4465	positive regulation of growth rate	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c9634	transport	transport	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c9634	determination of adult life span	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c9634	positive regulation of growth rate	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c9634	embryonic development ending in birth or egg hatching	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c9634	electron transport chain	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c4465	oxidation reduction	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c4465	embryonic development ending in birth or egg hatching	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c4465	nematode larval development	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c9634	oxidation reduction	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c9634	nematode larval development	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c4465	transport	transport	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c9634	growth	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c4465	growth	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c4465	electron transport chain	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_lrc13124	aromatic amino acid family metabolic process	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4-hydroxyphenylpyruvic acid oxidase) (4HPPD) (HPD) (HPPDase)
ruditapes_lrc13124	oxidation reduction	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4-hydroxyphenylpyruvic acid oxidase) (4HPPD) (HPD) (HPPDase)
ruditapes_lrc13124	L-phenylalanine catabolic process	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4-hydroxyphenylpyruvic acid oxidase) (4HPPD) (HPD) (HPPDase)
ruditapes_lrc13124	tyrosine catabolic process	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4-hydroxyphenylpyruvic acid oxidase) (4HPPD) (HPD) (HPPDase)
ruditapes_lrc28015	embryonic development ending in birth or egg hatching	developmental processes	P	Exocyst complex component 2 (Exocyst complex component Sec5)
ruditapes_lrc28015	gonad development	developmental processes	P	Exocyst complex component 2 (Exocyst complex component Sec5)
ruditapes_lrc28015	oogenesis	other biological processes	P	Exocyst complex component 2 (Exocyst complex component Sec5)
ruditapes_lrc28015	apoptosis	death	P	Exocyst complex component 2 (Exocyst complex component Sec5)
ruditapes_lrc28015	protein transport	transport	P	Exocyst complex component 2 (Exocyst complex component Sec5)
ruditapes_lrc28015	cell migration	other biological processes	P	Exocyst complex component 2 (Exocyst complex component Sec5)
ruditapes_lrc28015	exocytosis	transport	P	Exocyst complex component 2 (Exocyst complex component Sec5)
ruditapes_lrc28015	transport	transport	P	Exocyst complex component 2 (Exocyst complex component Sec5)
ruditapes_c10173	proteolysis	protein metabolism	P	Zinc metalloproteinase nas-26 (EC 3.4.24.21) (Nematode astacin 26) (Tollish protein 1)
ruditapes_c18341	fibroblast growth factor receptor signaling pathway	signal transduction	P	Leucine-rich repeat protein soc-2 (Suppressor of Clr protein 2) (Suppressor of activated let-60 Ras protein 8)
ruditapes_c18341	muscle organ development	developmental processes	P	Leucine-rich repeat protein soc-2 (Suppressor of Clr protein 2) (Suppressor of activated let-60 Ras protein 8)
ruditapes_c18341	nematode larval development	developmental processes	P	Leucine-rich repeat protein soc-2 (Suppressor of Clr protein 2) (Suppressor of activated let-60 Ras protein 8)
ruditapes_c18341	vulval development	developmental processes	P	Leucine-rich repeat protein soc-2 (Suppressor of Clr protein 2) (Suppressor of activated let-60 Ras protein 8)
ruditapes_c18341	regulation of cell projection organization	cell organization and biogenesis	P	Leucine-rich repeat protein soc-2 (Suppressor of Clr protein 2) (Suppressor of activated let-60 Ras protein 8)
ruditapes_c18341	positive regulation of Ras protein signal transduction	signal transduction	P	Leucine-rich repeat protein soc-2 (Suppressor of Clr protein 2) (Suppressor of activated let-60 Ras protein 8)
ruditapes_s34517	protein transport	transport	P	Ras and EF-hand domain-containing protein homolog
ruditapes_s34517	small GTPase mediated signal transduction	signal transduction	P	Ras and EF-hand domain-containing protein homolog
ruditapes_lrc38413	protein transport	transport	P	Ras and EF-hand domain-containing protein homolog
ruditapes_lrc35100	protein transport	transport	P	Ras and EF-hand domain-containing protein homolog
ruditapes_lrc38413	small GTPase mediated signal transduction	signal transduction	P	Ras and EF-hand domain-containing protein homolog
ruditapes_lrc35100	small GTPase mediated signal transduction	signal transduction	P	Ras and EF-hand domain-containing protein homolog
ruditapes_c16736	cellular lipid metabolic process	other metabolic processes	P	"Probable glycerol-3-phosphate acyltransferase, mitochondrial (GPAT) (EC 2.3.1.15)"
ruditapes_c16736	phospholipid biosynthetic process	other metabolic processes	P	"Probable glycerol-3-phosphate acyltransferase, mitochondrial (GPAT) (EC 2.3.1.15)"
ruditapes_c16736	metabolic process	other metabolic processes	P	"Probable glycerol-3-phosphate acyltransferase, mitochondrial (GPAT) (EC 2.3.1.15)"
ruditapes2_lrc5804	ion transport	transport	P	Innexin-11 (Protein opu-11)
ruditapes2_lrc5804	transport	transport	P	Innexin-11 (Protein opu-11)
ruditapes_c20276	protein amino acid adenylylation	protein metabolism	P	Adenosine monophosphate-protein transferase FICD homolog (EC 2.7.7.n1)
ruditapes_c14961	protein amino acid adenylylation	protein metabolism	P	Adenosine monophosphate-protein transferase FICD homolog (EC 2.7.7.n1)
ruditapes_c18249	locomotion	other biological processes	P	Twitchin (EC 2.7.11.1) (Uncoordinated protein 22)
ruditapes_c18249	reproduction	other biological processes	P	Twitchin (EC 2.7.11.1) (Uncoordinated protein 22)
ruditapes_c18249	negative regulation of multicellular organism growth	other biological processes	P	Twitchin (EC 2.7.11.1) (Uncoordinated protein 22)
ruditapes_c18249	phosphorylation	other metabolic processes	P	Twitchin (EC 2.7.11.1) (Uncoordinated protein 22)
ruditapes_c18249	positive regulation of multicellular organism growth	other biological processes	P	Twitchin (EC 2.7.11.1) (Uncoordinated protein 22)
ruditapes_c18249	protein amino acid phosphorylation	protein metabolism	P	Twitchin (EC 2.7.11.1) (Uncoordinated protein 22)
ruditapes_c18249	negative regulation of vulval development	developmental processes	P	Twitchin (EC 2.7.11.1) (Uncoordinated protein 22)
ruditapes_c21892	sporulation resulting in formation of a cellular spore	other biological processes	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	metabolic process	other metabolic processes	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	cAMP catabolic process	other metabolic processes	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	positive regulation of release of sequestered calcium ion into cytosol	transport	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	cAMP metabolic process	other metabolic processes	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	response to osmotic stress	stress response	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	signal transduction	signal transduction	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	negative regulation of lateral pseudopodium assembly	cell organization and biogenesis	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	regulation of release of sequestered calcium ion into cytosol	transport	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	sorocarp development	developmental processes	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	sorocarp development	stress response	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	two-component signal transduction system (phosphorelay)	signal transduction	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c21892	multicellular organismal development	developmental processes	P	"3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)"
ruditapes_c8803	regulation of mRNA stability	RNA metabolism	P	Protein Smaug
ruditapes_c8803	negative regulation of translation	protein metabolism	P	Protein Smaug
ruditapes_c8803	regulation of translation	protein metabolism	P	Protein Smaug
ruditapes_c8803	establishment of RNA localization	other biological processes	P	Protein Smaug
ruditapes_c8803	multicellular organismal development	developmental processes	P	Protein Smaug
ruditapes_c8803	nuclear-transcribed mRNA poly(A) tail shortening	RNA metabolism	P	Protein Smaug
ruditapes_c23958	flight behavior	other biological processes	P	Protein flightless-1 (Flightless-I)
ruditapes_c23958	myofibril assembly	developmental processes	P	Protein flightless-1 (Flightless-I)
ruditapes_c23958	myofibril assembly	cell organization and biogenesis	P	Protein flightless-1 (Flightless-I)
ruditapes_c23958	gastrulation involving germ band extension	developmental processes	P	Protein flightless-1 (Flightless-I)
ruditapes_c23958	adult somatic muscle development	developmental processes	P	Protein flightless-1 (Flightless-I)
ruditapes_c23958	multicellular organismal development	developmental processes	P	Protein flightless-1 (Flightless-I)
ruditapes_c13215	resolution of meiotic joint molecules as recombinants	cell cycle and proliferation	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	resolution of meiotic joint molecules as recombinants	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	meiotic chromosome segregation	cell cycle and proliferation	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	nucleotide-excision repair	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	nucleotide-excision repair	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	DNA metabolic process	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	mitotic cell cycle G2/M transition DNA damage checkpoint	signal transduction	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	mitotic cell cycle G2/M transition DNA damage checkpoint	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	DNA repair	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	DNA repair	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	reciprocal meiotic recombination	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	double-strand break repair	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	double-strand break repair	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	double-strand break repair via homologous recombination	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	double-strand break repair via homologous recombination	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	mitotic cell cycle G2/M transition DNA damage checkpoint	cell cycle and proliferation	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	meiotic mismatch repair	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	meiotic mismatch repair	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	response to DNA damage stimulus	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	"nucleotide-excision repair, DNA incision, 5'-to lesion"	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	"nucleotide-excision repair, DNA incision, 5'-to lesion"	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	reciprocal meiotic recombination	cell cycle and proliferation	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	DNA recombination	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	mismatch repair	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	mismatch repair	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	meiosis	cell cycle and proliferation	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	female meiosis chromosome segregation	cell cycle and proliferation	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes_c13215	meiotic mismatch repair	cell cycle and proliferation	P	DNA repair endonuclease XPF (EC 3.1.-.-) (Protein meiotic 9)
ruditapes2_c439	autophagy	other metabolic processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	imaginal disc-derived wing morphogenesis	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	microtubule-based process	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	salivary gland cell autophagic cell death	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	microtubule-based process	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	spermatid nucleus elongation	cell organization and biogenesis	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	actin filament bundle formation	cell organization and biogenesis	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	microtubule-based process	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	spermatid nucleus elongation	cell organization and biogenesis	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	wing disc development	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	bristle morphogenesis	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	imaginal disc-derived wing morphogenesis	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	oogenesis	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	autophagy	other metabolic processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	bristle morphogenesis	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	salivary gland cell autophagic cell death	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	salivary gland cell autophagic cell death	death	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	bristle development	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	wing disc development	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	sperm individualization	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	actin filament bundle formation	cell organization and biogenesis	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	salivary gland cell autophagic cell death	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	salivary gland cell autophagic cell death	death	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	spermatogenesis	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	autophagy	other metabolic processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	spermatogenesis	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	oogenesis	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	actin filament bundle formation	cell organization and biogenesis	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	sperm individualization	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	microtubule-based process	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	bristle development	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	actin filament bundle formation	cell organization and biogenesis	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	oogenesis	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	salivary gland cell autophagic cell death	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	salivary gland cell autophagic cell death	death	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	wing disc development	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	wing disc development	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	oogenesis	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	sperm individualization	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	bristle morphogenesis	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	sperm individualization	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	bristle development	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	spermatid nucleus elongation	cell organization and biogenesis	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	bristle development	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c1402	spermatid nucleus elongation	cell organization and biogenesis	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	spermatogenesis	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c269	imaginal disc-derived wing morphogenesis	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	salivary gland cell autophagic cell death	death	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	spermatogenesis	other biological processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	bristle morphogenesis	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_c3047	autophagy	other metabolic processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes2_c439	imaginal disc-derived wing morphogenesis	developmental processes	P	"Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut up protein)"
ruditapes_lrc17894	cell proliferation	cell cycle and proliferation	P	Origin recognition complex subunit 2 (DmORC2)
ruditapes_lrc17894	mitotic chromosome condensation	cell cycle and proliferation	P	Origin recognition complex subunit 2 (DmORC2)
ruditapes_lrc17894	mitotic chromosome condensation	cell organization and biogenesis	P	Origin recognition complex subunit 2 (DmORC2)
ruditapes_lrc17894	chromosome condensation	cell organization and biogenesis	P	Origin recognition complex subunit 2 (DmORC2)
ruditapes_lrc17894	mitotic spindle organization	cell cycle and proliferation	P	Origin recognition complex subunit 2 (DmORC2)
ruditapes_lrc17894	DNA replication initiation	DNA metabolism	P	Origin recognition complex subunit 2 (DmORC2)
ruditapes_lrc17894	mitotic spindle organization	cell organization and biogenesis	P	Origin recognition complex subunit 2 (DmORC2)
ruditapes_lrc17894	DNA replication	DNA metabolism	P	Origin recognition complex subunit 2 (DmORC2)
ruditapes_lrc17894	eggshell chorion gene amplification	DNA metabolism	P	Origin recognition complex subunit 2 (DmORC2)
ruditapes_lrc17894	eggshell chorion gene amplification	cell organization and biogenesis	P	Origin recognition complex subunit 2 (DmORC2)
ruditapes2_c772	sarcomere organization	developmental processes	P	Calcineurin subunit B type 2 (Protein phosphatase 2B regulatory subunit 2) (dCNB2)
ruditapes2_c772	sarcomere organization	cell organization and biogenesis	P	Calcineurin subunit B type 2 (Protein phosphatase 2B regulatory subunit 2) (dCNB2)
ruditapes2_c772	meiosis	cell cycle and proliferation	P	Calcineurin subunit B type 2 (Protein phosphatase 2B regulatory subunit 2) (dCNB2)
ruditapes2_c772	muscle thick filament assembly	developmental processes	P	Calcineurin subunit B type 2 (Protein phosphatase 2B regulatory subunit 2) (dCNB2)
ruditapes2_c772	muscle thick filament assembly	cell organization and biogenesis	P	Calcineurin subunit B type 2 (Protein phosphatase 2B regulatory subunit 2) (dCNB2)
ruditapes2_c772	vesicle-mediated transport	transport	P	Calcineurin subunit B type 2 (Protein phosphatase 2B regulatory subunit 2) (dCNB2)
ruditapes2_c772	positive regulation of NFAT protein import into nucleus	transport	P	Calcineurin subunit B type 2 (Protein phosphatase 2B regulatory subunit 2) (dCNB2)
ruditapes2_c772	sleep	other biological processes	P	Calcineurin subunit B type 2 (Protein phosphatase 2B regulatory subunit 2) (dCNB2)
ruditapes2_c772	neurotransmitter secretion	transport	P	Calcineurin subunit B type 2 (Protein phosphatase 2B regulatory subunit 2) (dCNB2)
ruditapes2_c772	neurotransmitter secretion	cell-cell signaling	P	Calcineurin subunit B type 2 (Protein phosphatase 2B regulatory subunit 2) (dCNB2)
ruditapes_lrc32401	ion transport	transport	P	"ATP synthase subunit d, mitochondrial (ATPase subunit d)"
ruditapes2_c32	proton transport	transport	P	"ATP synthase subunit d, mitochondrial (ATPase subunit d)"
ruditapes2_c32	ion transport	transport	P	"ATP synthase subunit d, mitochondrial (ATPase subunit d)"
ruditapes_lrc32401	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit d, mitochondrial (ATPase subunit d)"
ruditapes_lrc32401	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit d, mitochondrial (ATPase subunit d)"
ruditapes2_c32	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit d, mitochondrial (ATPase subunit d)"
ruditapes2_c32	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit d, mitochondrial (ATPase subunit d)"
ruditapes_lrc32401	transport	transport	P	"ATP synthase subunit d, mitochondrial (ATPase subunit d)"
ruditapes_lrc32401	proton transport	transport	P	"ATP synthase subunit d, mitochondrial (ATPase subunit d)"
ruditapes2_c32	transport	transport	P	"ATP synthase subunit d, mitochondrial (ATPase subunit d)"
ruditapes2_c1114	negative regulation of apoptosis	death	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	bristle morphogenesis	developmental processes	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	negative regulation of compound eye retinal cell programmed cell death	developmental processes	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	negative regulation of compound eye retinal cell programmed cell death	death	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	protein monoubiquitination	protein metabolism	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	antennal morphogenesis	developmental processes	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	spermatid nucleus differentiation	cell organization and biogenesis	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	positive regulation of protein ubiquitination	protein metabolism	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	cellular process	other biological processes	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	sensory organ development	developmental processes	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	anti-apoptosis	death	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	germ cell migration	other biological processes	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	apoptosis	death	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	border follicle cell migration	other biological processes	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	sensory organ precursor cell division	developmental processes	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	negative regulation of caspase activity	death	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes2_c1114	multicellular organismal development	developmental processes	P	Apoptosis 1 inhibitor (EC 6.3.2.-) (E3 ubiquitin-protein ligase th) (Inhibitor of apoptosis 1) (dIAP1) (Protein thread)
ruditapes_c10401	anti-apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c10401	"positive regulation of protein import into nucleus, translocation"	transport	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c10401	regulation of caspase activity	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c4051	defense response to Gram-negative bacterium	stress response	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c9217	"positive regulation of protein import into nucleus, translocation"	transport	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c9217	anti-apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_s40332	apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c9217	negative regulation of apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_s40332	regulation of caspase activity	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c3714	negative regulation of apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c10401	apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c4051	negative regulation of apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c9217	positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria	stress response	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c9217	positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria	other metabolic processes	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c4051	positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria	other metabolic processes	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c10401	negative regulation of caspase activity	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_s40332	negative regulation of apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c10401	negative regulation of apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c9217	apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c9217	negative regulation of caspase activity	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c3714	negative regulation of caspase activity	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c4051	negative regulation of caspase activity	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c3714	positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria	stress response	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c3714	positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria	other metabolic processes	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c4051	positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria	stress response	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_s40332	negative regulation of caspase activity	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c10401	sensory organ development	developmental processes	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c10401	positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria	stress response	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c10401	positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria	other metabolic processes	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c3714	apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c9217	sensory organ development	developmental processes	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c4051	apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_s40332	"positive regulation of protein import into nucleus, translocation"	transport	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c9217	regulation of caspase activity	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c4051	sensory organ development	developmental processes	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c3714	sensory organ development	developmental processes	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_s40332	positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria	stress response	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_s40332	positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria	other metabolic processes	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_s40332	anti-apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c4051	"positive regulation of protein import into nucleus, translocation"	transport	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c4051	anti-apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c9217	defense response to Gram-negative bacterium	stress response	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c3714	anti-apoptosis	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c3714	"positive regulation of protein import into nucleus, translocation"	transport	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c3714	defense response to Gram-negative bacterium	stress response	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c10401	defense response to Gram-negative bacterium	stress response	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_s40332	defense response to Gram-negative bacterium	stress response	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_s40332	sensory organ development	developmental processes	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c4051	regulation of caspase activity	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes2_c3714	regulation of caspase activity	death	P	Apoptosis 2 inhibitor (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2) (dIAP2)
ruditapes_c17777	Golgi organization	cell organization and biogenesis	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18) (DmOST50) (DrOST) (OST5OP)
ruditapes_c17777	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18) (DmOST50) (DrOST) (OST5OP)
ruditapes_c14721	Golgi organization	cell organization and biogenesis	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18) (DmOST50) (DrOST) (OST5OP)
ruditapes_c14721	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18) (DmOST50) (DrOST) (OST5OP)
ruditapes_c17777	lipid particle organization	cell organization and biogenesis	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18) (DmOST50) (DrOST) (OST5OP)
ruditapes_c14721	lipid particle organization	cell organization and biogenesis	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18) (DmOST50) (DrOST) (OST5OP)
ruditapes2_c7336	cell cycle	cell cycle and proliferation	P	Protein enhancer of rudimentary
ruditapes2_c7336	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Protein enhancer of rudimentary
ruditapes_c1704	ion transport	transport	P	Gamma-aminobutyric acid receptor alpha-like (GABA(A) receptor alpha-like and glycine receptor-like subunit of Drosophila) (GRD)
ruditapes_c1704	chloride transport	transport	P	Gamma-aminobutyric acid receptor alpha-like (GABA(A) receptor alpha-like and glycine receptor-like subunit of Drosophila) (GRD)
ruditapes_c1704	transport	transport	P	Gamma-aminobutyric acid receptor alpha-like (GABA(A) receptor alpha-like and glycine receptor-like subunit of Drosophila) (GRD)
ruditapes_c28758	oxygen transport	transport	P	Larval serum protein 2 (LSP-2) (Hexamerin-2)
ruditapes_c28758	transport	transport	P	Larval serum protein 2 (LSP-2) (Hexamerin-2)
ruditapes_lrc33799	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc5484	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc32848	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc34049	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33799	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc35536	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc5484	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc32848	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc4869	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc4869	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc4869	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33014	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33418	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33799	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc4279	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc34049	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc34049	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc36178	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc5484	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc36178	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33799	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33799	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc32848	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc32848	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33014	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc35536	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33418	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33418	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc35536	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc5484	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33418	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc34049	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc4279	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33338	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc3695	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33014	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc35536	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc35536	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc3695	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc4279	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33338	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc3695	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc3695	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc3695	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc34049	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33338	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33014	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc5484	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33338	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33338	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc36178	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc36178	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc36178	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33418	transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc4869	proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc32848	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc4869	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes_lrc33014	ion transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc4279	ATP synthesis coupled proton transport	transport	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_lrc4279	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase-coupling factor 6, mitochondrial (ATPase subunit F6)"
ruditapes2_c1606	eye-antennal disc development	developmental processes	P	Zinc finger protein Noc (Zinc finger protein NocA)
ruditapes2_c1606	Notch signaling pathway	signal transduction	P	Zinc finger protein Noc (Zinc finger protein NocA)
ruditapes2_c1606	open tracheal system development	developmental processes	P	Zinc finger protein Noc (Zinc finger protein NocA)
ruditapes2_c1606	leg disc development	developmental processes	P	Zinc finger protein Noc (Zinc finger protein NocA)
ruditapes2_c1606	wing disc development	developmental processes	P	Zinc finger protein Noc (Zinc finger protein NocA)
ruditapes2_c1606	"terminal branching, open tracheal system"	developmental processes	P	Zinc finger protein Noc (Zinc finger protein NocA)
ruditapes2_c1606	ocellus development	developmental processes	P	Zinc finger protein Noc (Zinc finger protein NocA)
ruditapes2_c1606	inter-male aggressive behavior	other biological processes	P	Zinc finger protein Noc (Zinc finger protein NocA)
ruditapes2_c1606	brain development	developmental processes	P	Zinc finger protein Noc (Zinc finger protein NocA)
ruditapes2_c1606	cell proliferation	cell cycle and proliferation	P	Zinc finger protein Noc (Zinc finger protein NocA)
ruditapes2_c1606	multicellular organismal development	developmental processes	P	Zinc finger protein Noc (Zinc finger protein NocA)
ruditapes2_c516	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit O, mitochondrial (Oligomycin sensitivity conferral protein) (OSCP)"
ruditapes2_c516	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit O, mitochondrial (Oligomycin sensitivity conferral protein) (OSCP)"
ruditapes2_c516	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit O, mitochondrial (Oligomycin sensitivity conferral protein) (OSCP)"
ruditapes2_c516	proton transport	transport	P	"ATP synthase subunit O, mitochondrial (Oligomycin sensitivity conferral protein) (OSCP)"
ruditapes2_c516	transport	transport	P	"ATP synthase subunit O, mitochondrial (Oligomycin sensitivity conferral protein) (OSCP)"
ruditapes2_c516	ion transport	transport	P	"ATP synthase subunit O, mitochondrial (Oligomycin sensitivity conferral protein) (OSCP)"
ruditapes_c17988	nuclear axial expansion	developmental processes	P	Centrosome-associated zinc finger protein CP190 (Protein enhancer of mod(mdg4)4-1) (dMAP190)
ruditapes_c17988	regulation of cytoskeleton organization	cell organization and biogenesis	P	Centrosome-associated zinc finger protein CP190 (Protein enhancer of mod(mdg4)4-1) (dMAP190)
ruditapes_c17988	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Centrosome-associated zinc finger protein CP190 (Protein enhancer of mod(mdg4)4-1) (dMAP190)
ruditapes_c17988	"transcription, DNA-dependent"	RNA metabolism	P	Centrosome-associated zinc finger protein CP190 (Protein enhancer of mod(mdg4)4-1) (dMAP190)
ruditapes_c17988	chromatin modification	cell organization and biogenesis	P	Centrosome-associated zinc finger protein CP190 (Protein enhancer of mod(mdg4)4-1) (dMAP190)
ruditapes_c14204	multicellular organismal development	developmental processes	P	Ryanodine receptor 44F
ruditapes_c14204	calcium ion transport	transport	P	Ryanodine receptor 44F
ruditapes_c14204	transmembrane transport	transport	P	Ryanodine receptor 44F
ruditapes_c14204	cellular calcium ion homeostasis	other biological processes	P	Ryanodine receptor 44F
ruditapes_c14204	ion transport	transport	P	Ryanodine receptor 44F
ruditapes_c14204	transmembrane calcium ion transport	transport	P	Ryanodine receptor 44F
ruditapes_c14204	muscle contraction	other biological processes	P	Ryanodine receptor 44F
ruditapes_c14204	transport	transport	P	Ryanodine receptor 44F
ruditapes_s37704	segmentation	developmental processes	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	ovarian follicle cell migration	other biological processes	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	dorsal appendage formation	cell organization and biogenesis	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	negative regulation of Notch signaling pathway	signal transduction	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	positive regulation of cell proliferation	cell cycle and proliferation	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	positive regulation of cell growth	other biological processes	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	peripheral nervous system development	developmental processes	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	autophagic cell death	death	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	compound eye photoreceptor cell differentiation	developmental processes	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	ovarian follicle cell development	other biological processes	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	chorion-containing eggshell formation	other biological processes	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	decapentaplegic receptor signaling pathway	signal transduction	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	negative regulation of cell fate specification	other biological processes	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	"transcription, DNA-dependent"	RNA metabolism	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	negative regulation of apoptosis	death	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	salivary gland cell autophagic cell death	developmental processes	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes_s37704	salivary gland cell autophagic cell death	death	P	"Protein bunched, class 2/F/G isoform (Protein shortsighted)"
ruditapes2_c2236	response to DNA damage stimulus	stress response	P	Exonuclease 1 (EC 3.1.-.-) (Exonuclease I) (Protein tosca)
ruditapes2_c2236	DNA recombination	DNA metabolism	P	Exonuclease 1 (EC 3.1.-.-) (Exonuclease I) (Protein tosca)
ruditapes2_c2236	DNA repair	stress response	P	Exonuclease 1 (EC 3.1.-.-) (Exonuclease I) (Protein tosca)
ruditapes2_c2236	DNA repair	DNA metabolism	P	Exonuclease 1 (EC 3.1.-.-) (Exonuclease I) (Protein tosca)
ruditapes2_c2236	mismatch repair	stress response	P	Exonuclease 1 (EC 3.1.-.-) (Exonuclease I) (Protein tosca)
ruditapes2_c2236	mismatch repair	DNA metabolism	P	Exonuclease 1 (EC 3.1.-.-) (Exonuclease I) (Protein tosca)
ruditapes_c10844	mRNA processing	RNA metabolism	P	Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor 50 kDa subunit) (U2 snRNP auxiliary factor large subunit)
ruditapes_c10844	nuclear export	transport	P	Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor 50 kDa subunit) (U2 snRNP auxiliary factor large subunit)
ruditapes_c10844	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor 50 kDa subunit) (U2 snRNP auxiliary factor large subunit)
ruditapes_c10844	mitotic spindle organization	cell cycle and proliferation	P	Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor 50 kDa subunit) (U2 snRNP auxiliary factor large subunit)
ruditapes_c10844	mitotic spindle organization	cell organization and biogenesis	P	Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor 50 kDa subunit) (U2 snRNP auxiliary factor large subunit)
ruditapes_c10844	"regulation of alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor 50 kDa subunit) (U2 snRNP auxiliary factor large subunit)
ruditapes_c10844	RNA splicing	RNA metabolism	P	Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor 50 kDa subunit) (U2 snRNP auxiliary factor large subunit)
ruditapes_c19677	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 6 (eIF-6)
ruditapes_c19677	translation	protein metabolism	P	Eukaryotic translation initiation factor 6 (eIF-6)
ruditapes_c19677	mature ribosome assembly	cell organization and biogenesis	P	Eukaryotic translation initiation factor 6 (eIF-6)
ruditapes_c19677	ribosome biogenesis	other biological processes	P	Eukaryotic translation initiation factor 6 (eIF-6)
ruditapes_c29234	nervous system development	developmental processes	P	Protein neuralized
ruditapes_c29234	sensory organ development	developmental processes	P	Protein neuralized
ruditapes_c29234	protein ubiquitination	protein metabolism	P	Protein neuralized
ruditapes_c29234	multicellular organismal development	developmental processes	P	Protein neuralized
ruditapes_c29234	sensory organ precursor cell fate determination	developmental processes	P	Protein neuralized
ruditapes_c29234	peripheral nervous system development	developmental processes	P	Protein neuralized
ruditapes_c29234	cell differentiation	other biological processes	P	Protein neuralized
ruditapes_c29234	mesoderm development	developmental processes	P	Protein neuralized
ruditapes_c4647	actin filament capping	protein metabolism	P	Severin
ruditapes_c4647	actin filament capping	cell organization and biogenesis	P	Severin
ruditapes_c5473	proteolysis	protein metabolism	P	Cathepsin L-like proteinase (EC 3.4.22.-)
ruditapes2_c1199	proteolysis	protein metabolism	P	Cathepsin L-like proteinase (EC 3.4.22.-)
ruditapes2_c2188	biological_process	other biological processes	P	UPF0390 protein zgc136864
ruditapes_c10964	bradykinin catabolic process	other metabolic processes	P	Insulin-degrading enzyme (EC 3.4.24.56) (Insulin protease) (Insulinase) (Insulysin)
ruditapes_c10964	proteolysis	protein metabolism	P	Insulin-degrading enzyme (EC 3.4.24.56) (Insulin protease) (Insulinase) (Insulysin)
ruditapes_c10964	beta-amyloid metabolic process	other metabolic processes	P	Insulin-degrading enzyme (EC 3.4.24.56) (Insulin protease) (Insulinase) (Insulysin)
ruditapes_c15329	DNA methylation	DNA metabolism	P	DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (EC 2.1.1.37)
ruditapes_c15329	methylation	other metabolic processes	P	DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (EC 2.1.1.37)
ruditapes_c15329	"transcription, DNA-dependent"	RNA metabolism	P	DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (EC 2.1.1.37)
ruditapes_c15329	gene silencing	other metabolic processes	P	DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (EC 2.1.1.37)
ruditapes_c15329	chromatin modification	cell organization and biogenesis	P	DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (EC 2.1.1.37)
ruditapes_c15329	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (EC 2.1.1.37)
ruditapes_c15329	"regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (EC 2.1.1.37)
ruditapes_c15329	regulation of cell proliferation	cell cycle and proliferation	P	DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (EC 2.1.1.37)
ruditapes_c15329	maintenance of DNA methylation	DNA metabolism	P	DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (EC 2.1.1.37)
ruditapes_c15329	regulation of gene expression	other metabolic processes	P	DNA (cytosine-5)-methyltransferase 1 (Dnmt1) (EC 2.1.1.37)
ruditapes_c28794	tRNA wobble uridine modification	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c28794	tRNA processing	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c9933	asparaginyl-tRNA aminoacylation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c9933	asparaginyl-tRNA aminoacylation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c9933	translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c9933	tRNA aminoacylation for protein translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c9933	tRNA aminoacylation for protein translation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes2_c7049	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c7049	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c7049	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c7049	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c7049	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_c23548	mRNA catabolic process	RNA metabolism	P	Carbon storage regulator homolog
ruditapes_c23548	regulation of carbohydrate metabolic process	other metabolic processes	P	Carbon storage regulator homolog
ruditapes_c23620	sodium ion transport	transport	P	FMRFamide-activated amiloride-sensitive sodium channel (FANACH)
ruditapes_c23620	ion transport	transport	P	FMRFamide-activated amiloride-sensitive sodium channel (FANACH)
ruditapes_c23620	transport	transport	P	FMRFamide-activated amiloride-sensitive sodium channel (FANACH)
ruditapes_c11747	transport	transport	P	Aquaporin (BfWC1) (Water channel 1)
ruditapes_c11747	water transport	transport	P	Aquaporin (BfWC1) (Water channel 1)
ruditapes_c11747	transmembrane transport	transport	P	Aquaporin (BfWC1) (Water channel 1)
ruditapes_c22320	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c22320	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c22320	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c22320	transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c22320	proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c22320	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c22320	ion transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c22320	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, mitochondrial (EC 3.6.3.14)"
ruditapes_c15526	protein transport	transport	P	Protein transport protein Sec61 subunit alpha
ruditapes_c15526	transport	transport	P	Protein transport protein Sec61 subunit alpha
ruditapes_c8267	rRNA methylation	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c8267	methylation	other metabolic processes	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c8267	rRNA processing	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c8267	rRNA modification	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c11458	translation	protein metabolism	P	50S ribosomal protein L4
ruditapes2_c1706	translation	protein metabolism	P	50S ribosomal protein L15
ruditapes_c13355	translation	protein metabolism	P	30S ribosomal protein S13
ruditapes_c17403	"regulation of transcription, DNA-dependent"	RNA metabolism	P	NAD-dependent protein deacetylase SIR2rp1 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-related protein 1)
ruditapes_c17403	"transcription, DNA-dependent"	RNA metabolism	P	NAD-dependent protein deacetylase SIR2rp1 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-related protein 1)
ruditapes_c17403	protein amino acid deacetylation	protein metabolism	P	NAD-dependent protein deacetylase SIR2rp1 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-related protein 1)
ruditapes_c7269	glycogen biosynthetic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c7269	carbohydrate metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c7269	glycogen metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c26718	translation	protein metabolism	P	Peptide deformylase (PDF) (EC 3.5.1.88) (Polypeptide deformylase)
ruditapes_c14174	sodium ion transport	transport	P	Bumetanide-sensitive sodium-(potassium)-chloride cotransporter (Na-K-CL symporter)
ruditapes_c14174	chloride transport	transport	P	Bumetanide-sensitive sodium-(potassium)-chloride cotransporter (Na-K-CL symporter)
ruditapes_c14174	transport	transport	P	Bumetanide-sensitive sodium-(potassium)-chloride cotransporter (Na-K-CL symporter)
ruditapes_c14174	ion transport	transport	P	Bumetanide-sensitive sodium-(potassium)-chloride cotransporter (Na-K-CL symporter)
ruditapes_c14174	transmembrane transport	transport	P	Bumetanide-sensitive sodium-(potassium)-chloride cotransporter (Na-K-CL symporter)
ruditapes_c14174	potassium ion transport	transport	P	Bumetanide-sensitive sodium-(potassium)-chloride cotransporter (Na-K-CL symporter)
ruditapes2_lrc2298	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc2298	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc34812	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc2298	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc34812	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc34812	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_c9978	proteolysis	protein metabolism	P	Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase)
ruditapes_c9978	protein metabolic process	protein metabolism	P	Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase)
ruditapes_c9902	metabolic process	other metabolic processes	P	Phenoloxidase subunit 2 (EC 1.14.18.1) (proPO-p2)
ruditapes_c9902	positive regulation of melanization defense response	stress response	P	Phenoloxidase subunit 2 (EC 1.14.18.1) (proPO-p2)
ruditapes_c9902	positive regulation of melanization defense response	other metabolic processes	P	Phenoloxidase subunit 2 (EC 1.14.18.1) (proPO-p2)
ruditapes_c9902	oxygen transport	transport	P	Phenoloxidase subunit 2 (EC 1.14.18.1) (proPO-p2)
ruditapes_c9902	melanin biosynthetic process	other metabolic processes	P	Phenoloxidase subunit 2 (EC 1.14.18.1) (proPO-p2)
ruditapes_c9902	melanin biosynthetic process from tyrosine	other metabolic processes	P	Phenoloxidase subunit 2 (EC 1.14.18.1) (proPO-p2)
ruditapes_c9902	oxidation reduction	other metabolic processes	P	Phenoloxidase subunit 2 (EC 1.14.18.1) (proPO-p2)
ruditapes_c9902	defense response	stress response	P	Phenoloxidase subunit 2 (EC 1.14.18.1) (proPO-p2)
ruditapes_c9902	transport	transport	P	Phenoloxidase subunit 2 (EC 1.14.18.1) (proPO-p2)
ruditapes_c29791	aromatic amino acid family biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c29791	cellular amino acid biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes_c9354	lipid A biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c9354	lipid biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c20442	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c20442	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c20442	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c20442	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c20442	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c28748	ion transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit F (Na(+)-NQR subunit F) (Na(+)-translocating NQR subunit F) (EC 1.6.5.-) (NQR complex subunit F) (NQR-1 subunit F)
ruditapes_c28748	transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit F (Na(+)-NQR subunit F) (Na(+)-translocating NQR subunit F) (EC 1.6.5.-) (NQR complex subunit F) (NQR-1 subunit F)
ruditapes_c28748	sodium ion transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit F (Na(+)-NQR subunit F) (Na(+)-translocating NQR subunit F) (EC 1.6.5.-) (NQR complex subunit F) (NQR-1 subunit F)
ruditapes_c28748	oxidation reduction	other metabolic processes	P	Na(+)-translocating NADH-quinone reductase subunit F (Na(+)-NQR subunit F) (Na(+)-translocating NQR subunit F) (EC 1.6.5.-) (NQR complex subunit F) (NQR-1 subunit F)
ruditapes_c2709	RNA processing	RNA metabolism	P	Endoribonuclease Dicer (EC 3.1.26.-)
ruditapes_c2709	pre-microRNA processing	RNA metabolism	P	Endoribonuclease Dicer (EC 3.1.26.-)
ruditapes_c2709	"RNA interference, production of siRNA"	RNA metabolism	P	Endoribonuclease Dicer (EC 3.1.26.-)
ruditapes_c2709	"RNA interference, targeting of mRNA for destruction"	other metabolic processes	P	Endoribonuclease Dicer (EC 3.1.26.-)
ruditapes_c2709	"RNA interference, targeting of mRNA for destruction"	cell organization and biogenesis	P	Endoribonuclease Dicer (EC 3.1.26.-)
ruditapes_c2709	gene silencing by RNA	other metabolic processes	P	Endoribonuclease Dicer (EC 3.1.26.-)
ruditapes_c14561	nitric oxide biosynthetic process	other metabolic processes	P	"Nitric oxide synthase, salivary gland (NOS) (EC 1.14.13.39)"
ruditapes_c14561	oxidation reduction	other metabolic processes	P	"Nitric oxide synthase, salivary gland (NOS) (EC 1.14.13.39)"
ruditapes_c16824	sensory perception of smell	other biological processes	P	Olfactory receptor-like protein HbT9 (Fragment)
ruditapes_c16824	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor-like protein HbT9 (Fragment)
ruditapes_c16824	response to stimulus	other biological processes	P	Olfactory receptor-like protein HbT9 (Fragment)
ruditapes_c16824	signal transduction	signal transduction	P	Olfactory receptor-like protein HbT9 (Fragment)
ruditapes_c6427	DNA replication initiation	DNA metabolism	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Protein disc proliferation abnormal)
ruditapes_c12293	mitotic spindle organization	cell cycle and proliferation	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Protein disc proliferation abnormal)
ruditapes_c12293	mitotic spindle organization	cell organization and biogenesis	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Protein disc proliferation abnormal)
ruditapes_c6427	DNA replication	DNA metabolism	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Protein disc proliferation abnormal)
ruditapes_c6427	mitotic spindle organization	cell cycle and proliferation	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Protein disc proliferation abnormal)
ruditapes_c6427	mitotic spindle organization	cell organization and biogenesis	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Protein disc proliferation abnormal)
ruditapes_c12293	DNA replication	DNA metabolism	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Protein disc proliferation abnormal)
ruditapes_c12293	DNA replication initiation	DNA metabolism	P	DNA replication licensing factor MCM4 (EC 3.6.4.12) (Protein disc proliferation abnormal)
ruditapes2_c3334	translation	protein metabolism	P	60S ribosomal protein L5
ruditapes_lrc32125	translation	protein metabolism	P	60S ribosomal protein L5
ruditapes_c3502	translation	protein metabolism	P	60S ribosomal protein L5
ruditapes_c5218	translation	protein metabolism	P	60S ribosomal protein L5
ruditapes_c7970	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) (SMCL1)
ruditapes_c6009	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (Cyclophilin B) (Rotamase B) (S-cyclophilin)
ruditapes_c6009	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (Cyclophilin B) (Rotamase B) (S-cyclophilin)
ruditapes_c4961	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase) (Smp17.7) (p17.7)
ruditapes_c4961	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase) (Smp17.7) (p17.7)
ruditapes_s40063	neuropeptide signaling pathway	signal transduction	P	Sperm receptor for egg jelly (suREJ)
ruditapes_lrc38353	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes2_c927	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc13797	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc32628	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c4044	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes2_c3394	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes2_c2645	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc32628	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc34231	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c5071	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc33039	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c36544	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc34227	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc35116	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c37990	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc35116	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc29444	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c26564	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc32628	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c34580	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c2904	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc16077	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc35399	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc33876	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes2_c2645	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c36544	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc38353	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes2_c927	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c34580	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c4044	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc38552	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c2904	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes2_c3394	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc13797	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc33755	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c5892	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc34227	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc33876	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc35399	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc13797	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c5071	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc29444	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c3797	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc34231	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc38552	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc33039	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes2_c927	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc16077	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc38353	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c5892	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c4044	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc38552	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes2_c3394	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc29444	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc33755	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc34227	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c37990	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes2_c2645	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc33755	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c3797	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c26564	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc35116	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c36544	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc34231	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc35399	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc33876	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c3797	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc16077	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c5071	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_lrc33039	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c34580	cell differentiation	other biological processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c5892	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c2904	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c37990	multicellular organismal development	developmental processes	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c26564	proteolysis	protein metabolism	P	Cathepsin L (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]
ruditapes_c7637	microtubule cytoskeleton organization	cell organization and biogenesis	P	Tektin-B1
ruditapes2_c748	mRNA export from nucleus	transport	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes2_c748	mitotic spindle organization	cell cycle and proliferation	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes2_c748	mitotic spindle organization	cell organization and biogenesis	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes_c22906	mRNA export from nucleus	transport	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes2_c748	"regulation of alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes2_c748	RNA splicing	RNA metabolism	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes2_c748	mRNA processing	RNA metabolism	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes_c22906	"regulation of alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes_c22906	mitotic spindle organization	cell cycle and proliferation	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes_c22906	mitotic spindle organization	cell organization and biogenesis	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes_c22906	mRNA processing	RNA metabolism	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes_c22906	RNA splicing	RNA metabolism	P	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)
ruditapes_c11072	single fertilization	other biological processes	P	ADP-ribosyl cyclase (ADRC) (EC 3.2.2.5) (NAD glycohydrolase) (NAD(+) nucleosidase) (NADase)
ruditapes_c15777	learning or memory	other biological processes	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	axon midline choice point recognition	developmental processes	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	axon midline choice point recognition	cell organization and biogenesis	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	signal transduction	signal transduction	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	memory	other biological processes	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	Wnt receptor signaling pathway	signal transduction	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	multicellular organismal development	developmental processes	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	axon guidance	developmental processes	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	axon guidance	cell organization and biogenesis	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	haltere development	developmental processes	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	olfactory learning	other biological processes	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	muscle attachment	developmental processes	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	salivary gland morphogenesis	developmental processes	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c15777	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase Drl (EC 2.7.10.1) (Protein derailed)
ruditapes_c11694	mechanosensory behavior	other biological processes	P	Mechanosensory protein 2
ruditapes_c17085	response to mechanical stimulus	other biological processes	P	Mechanosensory protein 2
ruditapes_c17085	mechanosensory behavior	other biological processes	P	Mechanosensory protein 2
ruditapes_c11694	response to mechanical stimulus	other biological processes	P	Mechanosensory protein 2
ruditapes_c30664	oxidation reduction	other metabolic processes	P	Putative cytochrome P450 CYP13A2 (EC 1.14.-.-)
ruditapes_lrc16474	nucleosome assembly	cell organization and biogenesis	P	Histone H3.3-like type 2
ruditapes_lrc16474	positive regulation of growth rate	other biological processes	P	Histone H3.3-like type 2
ruditapes_lrc16474	embryonic development ending in birth or egg hatching	developmental processes	P	Histone H3.3-like type 2
ruditapes_lrc16474	locomotion	other biological processes	P	Histone H3.3-like type 2
ruditapes_c266	oxidation reduction	other metabolic processes	P	Aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase [NAD(+)])
ruditapes_c266	metabolic process	other metabolic processes	P	Aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase [NAD(+)])
ruditapes_c24105	DNA methylation	DNA metabolism	P	DNA (cytosine-5)-methyltransferase PliMCI (EC 2.1.1.37) (DNA methyltransferase PliMCI) (DNA MTase PliMCI) (M.PliMCI) (Dnmt1) (MCMT)
ruditapes_c24105	methylation	other metabolic processes	P	DNA (cytosine-5)-methyltransferase PliMCI (EC 2.1.1.37) (DNA methyltransferase PliMCI) (DNA MTase PliMCI) (M.PliMCI) (Dnmt1) (MCMT)
ruditapes_c30490	phosphorylation	other metabolic processes	P	6-phosphofructokinase (Phosphofructokinase) (EC 2.7.1.11) (Phosphohexokinase)
ruditapes_c30490	metabolic process	other metabolic processes	P	6-phosphofructokinase (Phosphofructokinase) (EC 2.7.1.11) (Phosphohexokinase)
ruditapes_c30490	glycolysis	other metabolic processes	P	6-phosphofructokinase (Phosphofructokinase) (EC 2.7.1.11) (Phosphohexokinase)
ruditapes_c14761	oxidation reduction	other metabolic processes	P	L-lactate dehydrogenase (LDH) (EC 1.1.1.27)
ruditapes_c14761	malate metabolic process	other metabolic processes	P	L-lactate dehydrogenase (LDH) (EC 1.1.1.27)
ruditapes_c14761	cellular carbohydrate metabolic process	other metabolic processes	P	L-lactate dehydrogenase (LDH) (EC 1.1.1.27)
ruditapes_c14761	glycolysis	other metabolic processes	P	L-lactate dehydrogenase (LDH) (EC 1.1.1.27)
ruditapes_c14761	carbohydrate metabolic process	other metabolic processes	P	L-lactate dehydrogenase (LDH) (EC 1.1.1.27)
ruditapes2_c1978	microtubule-based movement	other biological processes	P	Cytoplasmic dynein 2 heavy chain 1 (Dynein heavy chain isotype 1B)
ruditapes2_c1978	multicellular organismal development	developmental processes	P	Cytoplasmic dynein 2 heavy chain 1 (Dynein heavy chain isotype 1B)
ruditapes2_c1978	ATP catabolic process	other metabolic processes	P	Cytoplasmic dynein 2 heavy chain 1 (Dynein heavy chain isotype 1B)
ruditapes_c20039	microtubule-based movement	other biological processes	P	Cytoplasmic dynein 2 heavy chain 1 (Dynein heavy chain isotype 1B)
ruditapes_c20039	cell projection organization	cell organization and biogenesis	P	Cytoplasmic dynein 2 heavy chain 1 (Dynein heavy chain isotype 1B)
ruditapes_c20039	multicellular organismal development	developmental processes	P	Cytoplasmic dynein 2 heavy chain 1 (Dynein heavy chain isotype 1B)
ruditapes_c20039	ATP catabolic process	other metabolic processes	P	Cytoplasmic dynein 2 heavy chain 1 (Dynein heavy chain isotype 1B)
ruditapes2_c1978	cell projection organization	cell organization and biogenesis	P	Cytoplasmic dynein 2 heavy chain 1 (Dynein heavy chain isotype 1B)
ruditapes_c677	methylation	other metabolic processes	P	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PIMT) (EC 2.1.1.77) (L-isoaspartyl protein carboxyl methyltransferase) (Protein L-isoaspartyl/D-aspartyl methyltransferase) (Protein-beta-aspartate methyltransferase) (dPIMT)
ruditapes_c677	protein modification process	protein metabolism	P	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PIMT) (EC 2.1.1.77) (L-isoaspartyl protein carboxyl methyltransferase) (Protein L-isoaspartyl/D-aspartyl methyltransferase) (Protein-beta-aspartate methyltransferase) (dPIMT)
ruditapes_c21080	nitric oxide biosynthetic process	other metabolic processes	P	"Nitric oxide synthase, inducible (EC 1.14.13.39) (Inducible NO synthase) (Inducible NOS) (iNOS) (NOS type II) (NOSII) (Peptidyl-cysteine S-nitrosylase NOS2)"
ruditapes_c21080	oxidation reduction	other metabolic processes	P	"Nitric oxide synthase, inducible (EC 1.14.13.39) (Inducible NO synthase) (Inducible NOS) (iNOS) (NOS type II) (NOSII) (Peptidyl-cysteine S-nitrosylase NOS2)"
ruditapes_c21080	peptidyl-cysteine S-nitrosylation	protein metabolism	P	"Nitric oxide synthase, inducible (EC 1.14.13.39) (Inducible NO synthase) (Inducible NOS) (iNOS) (NOS type II) (NOSII) (Peptidyl-cysteine S-nitrosylase NOS2)"
ruditapes_c21736	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Topless-related protein 4 (WUS-interacting protein 2)
ruditapes_c21736	"transcription, DNA-dependent"	RNA metabolism	P	Topless-related protein 4 (WUS-interacting protein 2)
ruditapes_c16506	cell adhesion	cell adhesion	P	Brevican core protein
ruditapes_lrc32546	cell adhesion	cell adhesion	P	Brevican core protein
ruditapes2_c5339	cell adhesion	cell adhesion	P	Brevican core protein
ruditapes_c26809	cell adhesion	cell adhesion	P	Brevican core protein
ruditapes_c18191	protein transport	transport	P	T-cell surface glycoprotein CD3 gamma chain (T-cell receptor T3 gamma chain) (CD antigen CD3g)
ruditapes_c18191	cell surface receptor linked signal transduction	signal transduction	P	T-cell surface glycoprotein CD3 gamma chain (T-cell receptor T3 gamma chain) (CD antigen CD3g)
ruditapes_c18191	establishment or maintenance of cell polarity	cell organization and biogenesis	P	T-cell surface glycoprotein CD3 gamma chain (T-cell receptor T3 gamma chain) (CD antigen CD3g)
ruditapes_c18191	regulation of apoptosis	death	P	T-cell surface glycoprotein CD3 gamma chain (T-cell receptor T3 gamma chain) (CD antigen CD3g)
ruditapes_c27426	multicellular organism growth	other biological processes	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase I) (Elastase-1)
ruditapes_c27426	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase I) (Elastase-1)
ruditapes_c27426	Wnt receptor signaling pathway	signal transduction	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase I) (Elastase-1)
ruditapes_c27426	digestive system development	developmental processes	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase I) (Elastase-1)
ruditapes_c27426	exocrine pancreas development	developmental processes	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase I) (Elastase-1)
ruditapes_c27426	post-embryonic development	developmental processes	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase I) (Elastase-1)
ruditapes_c27426	regulation of cell proliferation	cell cycle and proliferation	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase I) (Elastase-1)
ruditapes_c27426	inflammatory response	stress response	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase I) (Elastase-1)
ruditapes_c27426	proteolysis	protein metabolism	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase I) (Elastase-1)
ruditapes_c27426	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase I) (Elastase-1)
ruditapes_c27426	regulation of cell differentiation	other biological processes	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase I) (Elastase-1)
ruditapes_c9416	post-chaperonin tubulin folding pathway	protein metabolism	P	Tubulin-specific chaperone D (Beta-tubulin cofactor D) (Tubulin-folding cofactor D)
ruditapes_c9416	negative regulation of microtubule polymerization	protein metabolism	P	Tubulin-specific chaperone D (Beta-tubulin cofactor D) (Tubulin-folding cofactor D)
ruditapes_c9416	negative regulation of microtubule polymerization	cell organization and biogenesis	P	Tubulin-specific chaperone D (Beta-tubulin cofactor D) (Tubulin-folding cofactor D)
ruditapes_c9416	protein folding	protein metabolism	P	Tubulin-specific chaperone D (Beta-tubulin cofactor D) (Tubulin-folding cofactor D)
ruditapes_c9416	positive regulation of GTPase activity	other biological processes	P	Tubulin-specific chaperone D (Beta-tubulin cofactor D) (Tubulin-folding cofactor D)
ruditapes_c9416	adherens junction assembly	cell organization and biogenesis	P	Tubulin-specific chaperone D (Beta-tubulin cofactor D) (Tubulin-folding cofactor D)
ruditapes_c9416	negative regulation of cell-substrate adhesion	cell adhesion	P	Tubulin-specific chaperone D (Beta-tubulin cofactor D) (Tubulin-folding cofactor D)
ruditapes2_c4638	transmembrane transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog) (Fragment)"
ruditapes2_c4638	ion transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog) (Fragment)"
ruditapes_c30911	potassium ion transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog) (Fragment)"
ruditapes2_c4638	transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog) (Fragment)"
ruditapes2_c4638	regulation of transmembrane ion transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog) (Fragment)"
ruditapes_c30911	transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog) (Fragment)"
ruditapes2_c4638	potassium ion transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog) (Fragment)"
ruditapes_c30911	ion transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog) (Fragment)"
ruditapes_c30911	transmembrane transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog) (Fragment)"
ruditapes_c30911	regulation of transmembrane ion transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog) (Fragment)"
ruditapes_c14430	blood coagulation	stress response	P	von Willebrand factor (vWF)
ruditapes_c14430	liver development	developmental processes	P	von Willebrand factor (vWF)
ruditapes_c14430	cell adhesion	cell adhesion	P	von Willebrand factor (vWF)
ruditapes_c14430	hemostasis	other biological processes	P	von Willebrand factor (vWF)
ruditapes_c14430	cell-substrate adhesion	cell adhesion	P	von Willebrand factor (vWF)
ruditapes_c14430	protein homooligomerization	cell organization and biogenesis	P	von Willebrand factor (vWF)
ruditapes_c14430	placenta development	developmental processes	P	von Willebrand factor (vWF)
ruditapes_c14430	platelet activation	stress response	P	von Willebrand factor (vWF)
ruditapes_c18678	cell adhesion	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes2_c5381	cell adhesion	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes2_c732	transport	transport	P	Sodium channel protein type 4 subunit alpha (Sodium channel protein skeletal muscle subunit alpha) (Sodium channel protein type IV subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.4)
ruditapes2_c732	sodium ion transport	transport	P	Sodium channel protein type 4 subunit alpha (Sodium channel protein skeletal muscle subunit alpha) (Sodium channel protein type IV subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.4)
ruditapes2_c732	transmembrane transport	transport	P	Sodium channel protein type 4 subunit alpha (Sodium channel protein skeletal muscle subunit alpha) (Sodium channel protein type IV subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.4)
ruditapes2_c732	regulation of transmembrane ion transport	transport	P	Sodium channel protein type 4 subunit alpha (Sodium channel protein skeletal muscle subunit alpha) (Sodium channel protein type IV subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.4)
ruditapes2_c732	ion transport	transport	P	Sodium channel protein type 4 subunit alpha (Sodium channel protein skeletal muscle subunit alpha) (Sodium channel protein type IV subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.4)
ruditapes2_lrc4226	proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 7 (ADAM 7) (Epididymal apical protein I) (EAP I)
ruditapes_lrc24875	oxidation reduction	other metabolic processes	P	Thiomorpholine-carboxylate dehydrogenase (EC 1.5.1.25) (CDK108) (Mu-crystallin) (NADP-regulated thyroid-hormone-binding protein) (ketimine reductase)
ruditapes_c12490	ion transport	transport	P	Sodium-dependent phosphate transport protein 2A (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-6) (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1)
ruditapes_c12490	response to cadmium ion	other biological processes	P	Sodium-dependent phosphate transport protein 2A (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-6) (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1)
ruditapes_c12490	transport	transport	P	Sodium-dependent phosphate transport protein 2A (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-6) (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1)
ruditapes_c12490	response to lead ion	other biological processes	P	Sodium-dependent phosphate transport protein 2A (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-6) (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1)
ruditapes_c12490	phosphate ion homeostasis	other biological processes	P	Sodium-dependent phosphate transport protein 2A (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-6) (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1)
ruditapes_c12490	sodium ion transport	transport	P	Sodium-dependent phosphate transport protein 2A (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-6) (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1)
ruditapes_c12490	phosphate transport	transport	P	Sodium-dependent phosphate transport protein 2A (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-6) (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1)
ruditapes_c12490	bone remodeling	other biological processes	P	Sodium-dependent phosphate transport protein 2A (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-6) (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1)
ruditapes_c12490	response to mercury ion	other biological processes	P	Sodium-dependent phosphate transport protein 2A (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-6) (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (NaPi-2a) (Solute carrier family 34 member 1)
ruditapes_c9861	signal transduction	signal transduction	P	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform (PP2A B subunit isoform B'-delta) (PP2A B subunit isoform B'-gamma) (PP2A B subunit isoform B56-delta) (PP2A B subunit isoform PR61-delta) (PP2A B subunit isoform R5-delta)
ruditapes_c30877	G-protein coupled receptor protein signaling pathway	signal transduction	P	Oxytocin receptor (OT-R)
ruditapes_c30877	signal transduction	signal transduction	P	Oxytocin receptor (OT-R)
ruditapes_c7683	lipid transport	transport	P	Low-density lipoprotein receptor (LDL receptor) (Fragment)
ruditapes_c7683	transport	transport	P	Low-density lipoprotein receptor (LDL receptor) (Fragment)
ruditapes_c7683	steroid metabolic process	other metabolic processes	P	Low-density lipoprotein receptor (LDL receptor) (Fragment)
ruditapes_c7683	lipid metabolic process	other metabolic processes	P	Low-density lipoprotein receptor (LDL receptor) (Fragment)
ruditapes_c7683	cholesterol metabolic process	other metabolic processes	P	Low-density lipoprotein receptor (LDL receptor) (Fragment)
ruditapes_c7683	endocytosis	transport	P	Low-density lipoprotein receptor (LDL receptor) (Fragment)
ruditapes_c7683	endocytosis	cell organization and biogenesis	P	Low-density lipoprotein receptor (LDL receptor) (Fragment)
ruditapes_c8291	intracellular sterol transport	transport	P	Epididymal secretory protein E1 (Niemann Pick type C2 protein homolog) (cE1)
ruditapes_c8291	intracellular cholesterol transport	transport	P	Epididymal secretory protein E1 (Niemann Pick type C2 protein homolog) (cE1)
ruditapes_c8291	cholesterol homeostasis	other biological processes	P	Epididymal secretory protein E1 (Niemann Pick type C2 protein homolog) (cE1)
ruditapes_c8291	response to virus	other biological processes	P	Epididymal secretory protein E1 (Niemann Pick type C2 protein homolog) (cE1)
ruditapes_c8291	cholesterol transport	transport	P	Epididymal secretory protein E1 (Niemann Pick type C2 protein homolog) (cE1)
ruditapes_c8291	cholesterol efflux	transport	P	Epididymal secretory protein E1 (Niemann Pick type C2 protein homolog) (cE1)
ruditapes_c18807	uracil catabolic process	other metabolic processes	P	Dihydropyrimidine dehydrogenase [NADP(+)] (DHPDHase) (DPD) (EC 1.3.1.2) (Dihydrothymine dehydrogenase) (Dihydrouracil dehydrogenase)
ruditapes_c18807	thymidine catabolic process	other metabolic processes	P	Dihydropyrimidine dehydrogenase [NADP(+)] (DHPDHase) (DPD) (EC 1.3.1.2) (Dihydrothymine dehydrogenase) (Dihydrouracil dehydrogenase)
ruditapes_c18807	UMP biosynthetic process	other metabolic processes	P	Dihydropyrimidine dehydrogenase [NADP(+)] (DHPDHase) (DPD) (EC 1.3.1.2) (Dihydrothymine dehydrogenase) (Dihydrouracil dehydrogenase)
ruditapes_c18807	oxidation reduction	other metabolic processes	P	Dihydropyrimidine dehydrogenase [NADP(+)] (DHPDHase) (DPD) (EC 1.3.1.2) (Dihydrothymine dehydrogenase) (Dihydrouracil dehydrogenase)
ruditapes_c28119	proteolysis	protein metabolism	P	Cathepsin L1 (EC 3.4.22.15) [Cleaved into: Cathepsin L1 heavy chain; Cathepsin L1 light chain]
ruditapes_c24286	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Leucine-rich PPR motif-containing protein, mitochondrial"
ruditapes_c24286	"transcription, DNA-dependent"	RNA metabolism	P	"Leucine-rich PPR motif-containing protein, mitochondrial"
ruditapes_c24286	transport	transport	P	"Leucine-rich PPR motif-containing protein, mitochondrial"
ruditapes2_c482	mitosis	cell cycle and proliferation	P	SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin carrier protein 9) (Ubiquitin carrier protein I) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I)
ruditapes2_c482	mitosis	cell organization and biogenesis	P	SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin carrier protein 9) (Ubiquitin carrier protein I) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I)
ruditapes_c20719	mitosis	cell cycle and proliferation	P	SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin carrier protein 9) (Ubiquitin carrier protein I) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I)
ruditapes_c20719	mitosis	cell organization and biogenesis	P	SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin carrier protein 9) (Ubiquitin carrier protein I) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I)
ruditapes_c20719	cell division	other biological processes	P	SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin carrier protein 9) (Ubiquitin carrier protein I) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I)
ruditapes2_c482	cell division	other biological processes	P	SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin carrier protein 9) (Ubiquitin carrier protein I) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I)
ruditapes2_c482	chromosome segregation	other biological processes	P	SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin carrier protein 9) (Ubiquitin carrier protein I) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I)
ruditapes_c20719	chromosome segregation	other biological processes	P	SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin carrier protein 9) (Ubiquitin carrier protein I) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I)
ruditapes2_c482	cell cycle	cell cycle and proliferation	P	SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin carrier protein 9) (Ubiquitin carrier protein I) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I)
ruditapes_c20719	cell cycle	cell cycle and proliferation	P	SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin carrier protein 9) (Ubiquitin carrier protein I) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I)
ruditapes_c13475	cilium morphogenesis	cell organization and biogenesis	P	Intraflagellar transport protein 43 homolog
ruditapes_c13475	cell projection organization	cell organization and biogenesis	P	Intraflagellar transport protein 43 homolog
ruditapes_c19997	regulation of centriole replication	cell cycle and proliferation	P	Centrosomal protein of 76 kDa (Cep76)
ruditapes_c19997	regulation of centriole replication	cell organization and biogenesis	P	Centrosomal protein of 76 kDa (Cep76)
ruditapes_s37443	endosome transport	transport	P	WAS protein family homolog 1
ruditapes_s37443	Arp2/3 complex-mediated actin nucleation	cell organization and biogenesis	P	WAS protein family homolog 1
ruditapes_s37443	"retrograde transport, endosome to Golgi"	transport	P	WAS protein family homolog 1
ruditapes_s37443	transport	transport	P	WAS protein family homolog 1
ruditapes_c12932	protein modification process	protein metabolism	P	SUMO-activating enzyme subunit 1 (Ubiquitin-like 1-activating enzyme E1A)
ruditapes_c12932	protein sumoylation	protein metabolism	P	SUMO-activating enzyme subunit 1 (Ubiquitin-like 1-activating enzyme E1A)
ruditapes_c11116	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase subunit qtrtd1 (EC 2.4.2.29) (Queuine tRNA-ribosyltransferase domain-containing protein 1)
ruditapes_c11116	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase subunit qtrtd1 (EC 2.4.2.29) (Queuine tRNA-ribosyltransferase domain-containing protein 1)
ruditapes_c11116	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase subunit qtrtd1 (EC 2.4.2.29) (Queuine tRNA-ribosyltransferase domain-containing protein 1)
ruditapes2_lrc5225	methylation	other metabolic processes	P	tRNA (cytosine(34)-C(5))-methyltransferase (EC 2.1.1.203) (NOL1/NOP2/Sun domain family member 2)
ruditapes_lrc34976	tRNA processing	RNA metabolism	P	tRNA (cytosine(34)-C(5))-methyltransferase (EC 2.1.1.203) (NOL1/NOP2/Sun domain family member 2)
ruditapes_lrc34976	methylation	other metabolic processes	P	tRNA (cytosine(34)-C(5))-methyltransferase (EC 2.1.1.203) (NOL1/NOP2/Sun domain family member 2)
ruditapes2_c260	tRNA processing	RNA metabolism	P	tRNA (cytosine(34)-C(5))-methyltransferase (EC 2.1.1.203) (NOL1/NOP2/Sun domain family member 2)
ruditapes2_c260	methylation	other metabolic processes	P	tRNA (cytosine(34)-C(5))-methyltransferase (EC 2.1.1.203) (NOL1/NOP2/Sun domain family member 2)
ruditapes2_lrc5225	tRNA processing	RNA metabolism	P	tRNA (cytosine(34)-C(5))-methyltransferase (EC 2.1.1.203) (NOL1/NOP2/Sun domain family member 2)
ruditapes_c22022	vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 2
ruditapes_c22022	transport	transport	P	Trafficking protein particle complex subunit 2
ruditapes_c22022	ER to Golgi vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 2
ruditapes_c14108	prostaglandin biosynthetic process	other metabolic processes	P	Prostamide/prostaglandin F synthase (Prostamide/PG F synthase) (Prostamide/PGF synthase) (EC 1.11.1.20)
ruditapes_c14108	fatty acid biosynthetic process	other metabolic processes	P	Prostamide/prostaglandin F synthase (Prostamide/PG F synthase) (Prostamide/PGF synthase) (EC 1.11.1.20)
ruditapes_c14108	oxidation reduction	other metabolic processes	P	Prostamide/prostaglandin F synthase (Prostamide/PG F synthase) (Prostamide/PGF synthase) (EC 1.11.1.20)
ruditapes_c14108	lipid biosynthetic process	other metabolic processes	P	Prostamide/prostaglandin F synthase (Prostamide/PG F synthase) (Prostamide/PGF synthase) (EC 1.11.1.20)
ruditapes_c12868	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c12868	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c12868	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c12868	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c12868	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c12868	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_lrc12686	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_lrc12686	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_lrc12686	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_lrc12686	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_lrc12686	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes2_lrc4698	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes2_lrc4698	biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes2_lrc4698	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c10682	chlorophyll biosynthetic process	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c10682	pigment biosynthetic process	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c10682	photosynthesis	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c10682	bacteriochlorophyll biosynthetic process	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c10682	oxidation reduction	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c10682	"photosynthesis, dark reaction"	other metabolic processes	P	Light-independent protochlorophyllide reductase subunit B (DPOR subunit B) (LI-POR subunit B) (EC 1.18.-.-)
ruditapes_c27595	protein deglycosylation	protein metabolism	P	Putative N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase GA14866 (EC 3.5.1.26) (Aspartylglucosaminidase) (AGA) (Glycosylasparaginase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) [Cleaved into: Glycosylasparaginase alpha chain; Glycosylasparaginase beta chain]
ruditapes2_c2297	apoptosis	death	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (Oligosaccharyl transferase subunit DAD1) (EC 2.4.99.18) (Defender against cell death 1) (DAD-1)
ruditapes2_c2297	anti-apoptosis	death	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (Oligosaccharyl transferase subunit DAD1) (EC 2.4.99.18) (Defender against cell death 1) (DAD-1)
ruditapes2_c2297	blastocyst development	developmental processes	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (Oligosaccharyl transferase subunit DAD1) (EC 2.4.99.18) (Defender against cell death 1) (DAD-1)
ruditapes2_c2297	protein amino acid glycosylation	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (Oligosaccharyl transferase subunit DAD1) (EC 2.4.99.18) (Defender against cell death 1) (DAD-1)
ruditapes_c16859	negative regulation of cytokine-mediated signaling pathway	signal transduction	P	Interleukin-1 receptor antagonist protein (IL-1RN) (IL-1ra) (IRAP) (IL1 inhibitor)
ruditapes2_c2696	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit gamma (TCP-1-gamma) (CCT-gamma) (Matricin) (Fragment)
ruditapes2_c2696	protein folding	protein metabolism	P	T-complex protein 1 subunit gamma (TCP-1-gamma) (CCT-gamma) (Matricin) (Fragment)
ruditapes2_c310	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate kinase cytosolic and mitochondrial) (Adenylate monophosphate kinase)
ruditapes2_c310	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate kinase cytosolic and mitochondrial) (Adenylate monophosphate kinase)
ruditapes2_c310	phosphorylation	other metabolic processes	P	Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate kinase cytosolic and mitochondrial) (Adenylate monophosphate kinase)
ruditapes_c8277	signal transduction	signal transduction	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (P230) (Tenascin-C) (TN-C)
ruditapes_c8277	cell adhesion	cell adhesion	P	Tenascin (TN) (Cytotactin) (GMEM) (GP 150-225) (Glioma-associated-extracellular matrix antigen) (Hexabrachion) (JI) (Myotendinous antigen) (Neuronectin) (P230) (Tenascin-C) (TN-C)
ruditapes_c4384	RNA modification	RNA metabolism	P	Threonylcarbamoyladenosine tRNA methylthiotransferase (EC 2.-.-.-) (CDKAL1-like protein) (tRNA-t(6)A37 methylthiotransferase)
ruditapes_c4384	biopolymer modification	other metabolic processes	P	Threonylcarbamoyladenosine tRNA methylthiotransferase (EC 2.-.-.-) (CDKAL1-like protein) (tRNA-t(6)A37 methylthiotransferase)
ruditapes_c4384	biological_process	other biological processes	P	Threonylcarbamoyladenosine tRNA methylthiotransferase (EC 2.-.-.-) (CDKAL1-like protein) (tRNA-t(6)A37 methylthiotransferase)
ruditapes_c28982	biological_process	other biological processes	P	Protein GDAP2 homolog
ruditapes2_c18	biological_process	other biological processes	P	Protein dopey-1 homolog
ruditapes2_c18	protein transport	transport	P	Protein dopey-1 homolog
ruditapes2_c18	transport	transport	P	Protein dopey-1 homolog
ruditapes_c30785	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor Ken (Protein Ken and Barbie)
ruditapes_c30785	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor Ken (Protein Ken and Barbie)
ruditapes_c30785	female genitalia development	developmental processes	P	Transcription factor Ken (Protein Ken and Barbie)
ruditapes_c30785	multicellular organismal development	developmental processes	P	Transcription factor Ken (Protein Ken and Barbie)
ruditapes_c30785	male analia development	developmental processes	P	Transcription factor Ken (Protein Ken and Barbie)
ruditapes_c30785	negative regulation of JAK-STAT cascade	signal transduction	P	Transcription factor Ken (Protein Ken and Barbie)
ruditapes_c30785	female analia development	developmental processes	P	Transcription factor Ken (Protein Ken and Barbie)
ruditapes_c30785	male genitalia development	developmental processes	P	Transcription factor Ken (Protein Ken and Barbie)
ruditapes_c5326	microtubule-based movement	other biological processes	P	Kinesin-like protein costa (Kinesin-like protein costal2)
ruditapes_c5326	positive regulation of hh target transcription factor activity	signal transduction	P	Kinesin-like protein costa (Kinesin-like protein costal2)
ruditapes_c5326	positive regulation of hh target transcription factor activity	RNA metabolism	P	Kinesin-like protein costa (Kinesin-like protein costal2)
ruditapes_c16419	fibrinolysis	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes2_c7467	tissue remodeling	other biological processes	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes2_c7467	blood coagulation	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c16419	proteolysis	protein metabolism	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c16419	blood coagulation	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes2_c7467	proteolysis	protein metabolism	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c16419	tissue remodeling	other biological processes	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes2_c7467	fibrinolysis	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_s33525	metabolic process	other metabolic processes	P	"Aldehyde dehydrogenase, cytosolic 1 (EC 1.2.1.3) (ALDH class 1) (ETA-crystallin)"
ruditapes_s33525	oxidation reduction	other metabolic processes	P	"Aldehyde dehydrogenase, cytosolic 1 (EC 1.2.1.3) (ALDH class 1) (ETA-crystallin)"
ruditapes_c1436	oxidation reduction	other metabolic processes	P	"Aldehyde dehydrogenase, cytosolic 2 (EC 1.2.1.3) (ALDH class 1) (ALDH1-NL) (Non-lens ALDH1) (Fragment)"
ruditapes_c1436	metabolic process	other metabolic processes	P	"Aldehyde dehydrogenase, cytosolic 2 (EC 1.2.1.3) (ALDH class 1) (ALDH1-NL) (Non-lens ALDH1) (Fragment)"
ruditapes_s38515	glucose metabolic process	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_s38515	carbohydrate metabolic process	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_s38515	oxidation reduction	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_c19530	protein modification process	protein metabolism	P	Ubiquitin-like modifier-activating enzyme 1 (Ubiquitin-activating enzyme E1)
ruditapes_lrc32653	oxidation reduction	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_lrc32631	metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes2_lrc5741	metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes2_lrc5741	oxidation reduction	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_lrc32653	metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_lrc34118	oxidation reduction	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_s33462	metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_lrc38189	oxidation reduction	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes2_lrc5361	metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_s32555	oxidation reduction	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes2_lrc5361	oxidation reduction	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_lrc38189	metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_lrc32631	oxidation reduction	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_lrc34116	oxidation reduction	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_lrc34116	metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_lrc34118	metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_s32555	metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_s33462	oxidation reduction	other metabolic processes	P	Carbonyl reductase [NADPH] 2 (EC 1.1.1.184) (Lung carbonyl reductase) (LCR) (NADPH-dependent carbonyl reductase 2)
ruditapes_c9055	glycolysis	other metabolic processes	P	Pyruvate kinase isozymes R/L (EC 2.7.1.40)
ruditapes_c9055	metabolic process	other metabolic processes	P	Pyruvate kinase isozymes R/L (EC 2.7.1.40)
ruditapes_c9055	response to other organism	other biological processes	P	Pyruvate kinase isozymes R/L (EC 2.7.1.40)
ruditapes_c9055	phosphorylation	other metabolic processes	P	Pyruvate kinase isozymes R/L (EC 2.7.1.40)
ruditapes_s37780	protein stabilization	protein metabolism	P	Clusterin (CP40) (Complement cytolysis inhibitor) (CLI) [Cleaved into: Clusterin beta chain; Clusterin alpha chain]
ruditapes_s37780	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Clusterin (CP40) (Complement cytolysis inhibitor) (CLI) [Cleaved into: Clusterin beta chain; Clusterin alpha chain]
ruditapes_s37780	cell death	death	P	Clusterin (CP40) (Complement cytolysis inhibitor) (CLI) [Cleaved into: Clusterin beta chain; Clusterin alpha chain]
ruditapes_s37780	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Clusterin (CP40) (Complement cytolysis inhibitor) (CLI) [Cleaved into: Clusterin beta chain; Clusterin alpha chain]
ruditapes_c22417	T cell costimulation	other biological processes	P	"HLA class II histocompatibility antigen, DRB1-16 beta chain (MHC class II antigen DRB1*16) (DR-16) (DR16)"
ruditapes_c22417	antigen processing and presentation of peptide or polysaccharide antigen via MHC class II	other biological processes	P	"HLA class II histocompatibility antigen, DRB1-16 beta chain (MHC class II antigen DRB1*16) (DR-16) (DR16)"
ruditapes_c22417	cytokine-mediated signaling pathway	signal transduction	P	"HLA class II histocompatibility antigen, DRB1-16 beta chain (MHC class II antigen DRB1*16) (DR-16) (DR16)"
ruditapes_c22417	immune response	other biological processes	P	"HLA class II histocompatibility antigen, DRB1-16 beta chain (MHC class II antigen DRB1*16) (DR-16) (DR16)"
ruditapes_c22417	antigen processing and presentation	other biological processes	P	"HLA class II histocompatibility antigen, DRB1-16 beta chain (MHC class II antigen DRB1*16) (DR-16) (DR16)"
ruditapes_c22417	interferon-gamma-mediated signaling pathway	signal transduction	P	"HLA class II histocompatibility antigen, DRB1-16 beta chain (MHC class II antigen DRB1*16) (DR-16) (DR16)"
ruditapes_c22417	T cell receptor signaling pathway	signal transduction	P	"HLA class II histocompatibility antigen, DRB1-16 beta chain (MHC class II antigen DRB1*16) (DR-16) (DR16)"
ruditapes_c10223	biological_process	other biological processes	P	Protein FAM50 homolog
ruditapes_c21402	transport	transport	P	Protein real-time
ruditapes_c21402	biological_process	other biological processes	P	Protein real-time
ruditapes_c28807	nervous system development	developmental processes	P	Protein purity of essence
ruditapes_c28807	sperm individualization	developmental processes	P	Protein purity of essence
ruditapes_c28807	spermatid development	other biological processes	P	Protein purity of essence
ruditapes_c28807	cell differentiation	other biological processes	P	Protein purity of essence
ruditapes_c28807	response to stimulus	other biological processes	P	Protein purity of essence
ruditapes_c28807	multicellular organismal development	developmental processes	P	Protein purity of essence
ruditapes_c28807	visual perception	other biological processes	P	Protein purity of essence
ruditapes_c28807	protein ubiquitination	protein metabolism	P	Protein purity of essence
ruditapes_c18171	biological_process	other biological processes	P	Coiled-coil and C2 domain-containing protein 1-like
ruditapes_c22504	protein transport	transport	P	Post-GPI attachment to proteins factor 2
ruditapes_c22504	GPI anchor biosynthetic process	protein metabolism	P	Post-GPI attachment to proteins factor 2
ruditapes_c314	biological_process	other biological processes	P	"Probable 39S ribosomal protein L24, mitochondrial (L24mt) (MRP-L24)"
ruditapes_c314	translation	protein metabolism	P	"Probable 39S ribosomal protein L24, mitochondrial (L24mt) (MRP-L24)"
ruditapes_c17303	potassium ion transport	transport	P	BTB/POZ domain-containing protein KCTD18
ruditapes_c2030	tricarboxylic acid cycle	other metabolic processes	P	"Citrate synthase, mitochondrial (EC 2.3.3.1)"
ruditapes_c2030	carbohydrate metabolic process	other metabolic processes	P	"Citrate synthase, mitochondrial (EC 2.3.3.1)"
ruditapes_c2030	cellular carbohydrate metabolic process	other metabolic processes	P	"Citrate synthase, mitochondrial (EC 2.3.3.1)"
ruditapes_c17427	methylation	other metabolic processes	P	Pre-miRNA 5'-monophosphate methyltransferase (EC 2.1.1.-) (BCDIN3 domain-containing protein)
ruditapes2_c366	interspecies interaction between organisms	other biological processes	P	Pre-glycoprotein polyprotein GP complex [Cleaved into: Stable signal peptide (SSP); Glycoprotein G1 (GP1); Glycoprotein G2 (GP2)]
ruditapes2_c475	interspecies interaction between organisms	other biological processes	P	Pre-glycoprotein polyprotein GP complex [Cleaved into: Stable signal peptide (SSP); Glycoprotein G1 (GP1); Glycoprotein G2 (GP2)]
ruditapes_c5324	interspecies interaction between organisms	other biological processes	P	Pre-glycoprotein polyprotein GP complex [Cleaved into: Stable signal peptide (SSP); Glycoprotein G1 (GP1); Glycoprotein G2 (GP2)]
ruditapes_lrc33391	biological_process	other biological processes	P	Putative uncharacterized protein C27E2.12
ruditapes_c15298	translation	protein metabolism	P	"50S ribosomal protein L16, plastid"
ruditapes_c11561	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta)
ruditapes_c22749	tRNA processing	RNA metabolism	P	"tRNA(Ile)-lysidine synthase, plastid (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase)"
ruditapes_c5384	transport	transport	P	Polycystic kidney disease protein 1-like 3 (PC1-like 3 protein) (Polycystin-1L3)
ruditapes_c5384	ion transport	transport	P	Polycystic kidney disease protein 1-like 3 (PC1-like 3 protein) (Polycystin-1L3)
ruditapes_c5384	biological_process	other biological processes	P	Polycystic kidney disease protein 1-like 3 (PC1-like 3 protein) (Polycystin-1L3)
ruditapes_c5384	neuropeptide signaling pathway	signal transduction	P	Polycystic kidney disease protein 1-like 3 (PC1-like 3 protein) (Polycystin-1L3)
ruditapes_s39765	"transcription, DNA-dependent"	RNA metabolism	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c12993	"transcription, DNA-dependent"	RNA metabolism	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_s39765	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c12993	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_s39765	neuron migration	developmental processes	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes_c12993	neuron migration	developmental processes	P	RE1-silencing transcription factor (Neural-restrictive silencer factor)
ruditapes2_c1817	multicellular organismal development	developmental processes	P	Protogenin A
ruditapes_c26274	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 7 (Cofactor required for Sp1 transcriptional activation subunit 9) (CRSP complex subunit 9) (Mediator complex subunit 7)
ruditapes_c26274	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 7 (Cofactor required for Sp1 transcriptional activation subunit 9) (CRSP complex subunit 9) (Mediator complex subunit 7)
ruditapes_c26274	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 7 (Cofactor required for Sp1 transcriptional activation subunit 9) (CRSP complex subunit 9) (Mediator complex subunit 7)
ruditapes_c10017	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase regulatory chain
ruditapes_c10017	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase regulatory chain
ruditapes_c3576	cellular amino acid biosynthetic process	other metabolic processes	P	3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type I DHQase)
ruditapes_c3576	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type I DHQase)
ruditapes_c14128	dTDP biosynthetic process	other metabolic processes	P	Probable thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c14128	nucleotide biosynthetic process	other metabolic processes	P	Probable thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c14128	phosphorylation	other metabolic processes	P	Probable thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes2_c2340	DNA replication	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Mhu polC intein (Mhu pol II intein)]
ruditapes2_c2340	DNA catabolic process	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Mhu polC intein (Mhu pol II intein)]
ruditapes2_c2340	intein-mediated protein splicing	protein metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Mhu polC intein (Mhu pol II intein)]
ruditapes2_c2340	metabolic process	other metabolic processes	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Mhu polC intein (Mhu pol II intein)]
ruditapes_c12374	tRNA processing	RNA metabolism	P	Ribonuclease P protein component 4 (RNase P component 4) (EC 3.1.26.5)
ruditapes_c12374	tRNA 5'-leader removal	RNA metabolism	P	Ribonuclease P protein component 4 (RNase P component 4) (EC 3.1.26.5)
ruditapes_c19307	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c19307	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c19307	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c19307	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c19307	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c1343	oxidation reduction	other metabolic processes	P	Uncharacterized oxidoreductase SAOUHSC
ruditapes2_c1343	metabolic process	other metabolic processes	P	Uncharacterized oxidoreductase SAOUHSC
ruditapes_c28760	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase)
ruditapes_c28760	RNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase)
ruditapes_c28760	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase)
ruditapes_c29025	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit C (EC 1.6.99.5) (NADH dehydrogenase I subunit C) (NDH-1 subunit C)
ruditapes_c29025	transport	transport	P	NADH-quinone oxidoreductase subunit C (EC 1.6.99.5) (NADH dehydrogenase I subunit C) (NDH-1 subunit C)
ruditapes_c10661	translation	protein metabolism	P	50S ribosomal protein L28
ruditapes_c21936	oxidation reduction	other metabolic processes	P	Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase)
ruditapes_c21936	pyridoxal phosphate biosynthetic process	other metabolic processes	P	Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase)
ruditapes_c21936	pyridoxine biosynthetic process	other metabolic processes	P	Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase)
ruditapes_c17701	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes2_c2961	cysteine metabolic process	other metabolic processes	P	Cysteine desulfurase (EC 2.8.1.7)
ruditapes2_c2961	metabolic process	other metabolic processes	P	Cysteine desulfurase (EC 2.8.1.7)
ruditapes_c26364	cellular amino acid biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c26364	phosphorylation	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c26364	arginine biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c22471	purine nucleotide metabolic process	other metabolic processes	P	Guanylate kinase (EC 2.7.4.8) (GMP kinase)
ruditapes_c22471	phosphorylation	other metabolic processes	P	Guanylate kinase (EC 2.7.4.8) (GMP kinase)
ruditapes_c26110	nucleotide-excision repair	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c26110	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c26110	SOS response	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c26110	DNA repair	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c26110	DNA repair	DNA metabolism	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c26110	response to DNA damage stimulus	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c7685	pyridoxine biosynthetic process	other metabolic processes	P	Pyridoxine 5'-phosphate synthase (PNP synthase) (EC 2.6.99.2)
ruditapes_c23495	translation	protein metabolism	P	30S ribosomal protein S15
ruditapes_c7770	protein transport	transport	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes_c7770	transport	transport	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes_c7770	autophagic vacuole formation	cell organization and biogenesis	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes_c7770	autophagy	other metabolic processes	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes_c7770	autophagic vacuole formation	stress response	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes_c7770	autophagic vacuole formation	other metabolic processes	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes2_c1225	transport	transport	P	Autophagy-related protein 2
ruditapes2_c1225	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes2_c1225	protein transport	transport	P	Autophagy-related protein 2
ruditapes_c26357	proteolysis	protein metabolism	P	Probable Xaa-Pro aminopeptidase P (AMPP) (Aminopeptidase P) (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Prolidase)
ruditapes_c26357	cellular process	other biological processes	P	Probable Xaa-Pro aminopeptidase P (AMPP) (Aminopeptidase P) (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Prolidase)
ruditapes_c39309	defense response to fungus	stress response	P	Coactosin-like protein
ruditapes2_c1370	defense response to fungus	stress response	P	Coactosin-like protein
ruditapes_c2235	metabolic process	other metabolic processes	P	"Acylpyruvase FAHD1, mitochondrial (EC 3.7.1.5) (Fumarylacetoacetate hydrolase domain-containing protein 1)"
ruditapes_c23765	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_c23765	metabolic process	other metabolic processes	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_c23765	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_lrc30921	translation	protein metabolism	P	Elongation factor 1-alpha 4 (EF-1-alpha-4)
ruditapes_lrc30921	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha 4 (EF-1-alpha-4)
ruditapes_lrc30921	translational elongation	protein metabolism	P	Elongation factor 1-alpha 4 (EF-1-alpha-4)
ruditapes_c12936	peptidyl-tyrosine phosphorylation	protein metabolism	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c12936	activation of MAPK activity	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c12936	activation of MAPK activity	protein metabolism	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c12936	phosphorylation	other metabolic processes	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c12936	protein amino acid phosphorylation	protein metabolism	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c12936	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes_c12936	cytokine-mediated signaling pathway	signal transduction	P	Mast/stem cell growth factor receptor Kit (SCFR) (EC 2.7.10.1) (Proto-oncogene c-Kit) (Tyrosine-protein kinase Kit) (CD antigen CD117)
ruditapes2_c1323	protein stabilization	protein metabolism	P	Calreticulin
ruditapes2_c1323	protein folding	protein metabolism	P	Calreticulin
ruditapes_c15268	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Sperm flagellar protein 2 (Protein KPL2)
ruditapes_c4247	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc34535	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc32993	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc38212	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_c7107	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes2_c6814	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes2_c3467	positive regulation of dopamine receptor signaling pathway	signal transduction	P	Caveolin-2
ruditapes_lrc12828	skeletal muscle fiber development	developmental processes	P	Caveolin-2
ruditapes_lrc12828	endoplasmic reticulum organization	cell organization and biogenesis	P	Caveolin-2
ruditapes_lrc38558	positive regulation of dopamine receptor signaling pathway	signal transduction	P	Caveolin-2
ruditapes_lrc12828	mitochondrion organization	cell organization and biogenesis	P	Caveolin-2
ruditapes_lrc12828	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	Caveolin-2
ruditapes_lrc12828	vesicle fusion	transport	P	Caveolin-2
ruditapes_lrc12828	vesicle fusion	cell organization and biogenesis	P	Caveolin-2
ruditapes_lrc38558	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	Caveolin-2
ruditapes_lrc38558	vesicle docking	transport	P	Caveolin-2
ruditapes2_c3467	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	Caveolin-2
ruditapes2_c3467	vesicle docking	transport	P	Caveolin-2
ruditapes2_c3467	mitochondrion organization	cell organization and biogenesis	P	Caveolin-2
ruditapes_lrc12828	positive regulation of dopamine receptor signaling pathway	signal transduction	P	Caveolin-2
ruditapes2_c3467	endoplasmic reticulum organization	cell organization and biogenesis	P	Caveolin-2
ruditapes2_c3467	skeletal muscle fiber development	developmental processes	P	Caveolin-2
ruditapes_lrc38558	skeletal muscle fiber development	developmental processes	P	Caveolin-2
ruditapes_lrc38558	endoplasmic reticulum organization	cell organization and biogenesis	P	Caveolin-2
ruditapes_lrc38558	mitochondrion organization	cell organization and biogenesis	P	Caveolin-2
ruditapes_lrc12828	vesicle docking	transport	P	Caveolin-2
ruditapes2_c3467	vesicle fusion	transport	P	Caveolin-2
ruditapes2_c3467	vesicle fusion	cell organization and biogenesis	P	Caveolin-2
ruditapes_lrc38558	vesicle fusion	transport	P	Caveolin-2
ruditapes_lrc38558	vesicle fusion	cell organization and biogenesis	P	Caveolin-2
ruditapes_c18519	tRNA processing	RNA metabolism	P	tRNA 2-thiocytidine biosynthesis protein TtcA
ruditapes_c19254	carbohydrate metabolic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c19254	cell division	other biological processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c19254	lipid glycosylation	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c19254	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c19254	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c19254	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c19254	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c19254	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c21090	nitrogen compound metabolic process	other metabolic processes	P	Urease subunit alpha (EC 3.5.1.5) (Urea amidohydrolase subunit alpha)
ruditapes_c21090	urea metabolic process	other metabolic processes	P	Urease subunit alpha (EC 3.5.1.5) (Urea amidohydrolase subunit alpha)
ruditapes_c23265	photosynthesis	other metabolic processes	P	Ribulose bisphosphate carboxylase (RuBisCO) (EC 4.1.1.39)
ruditapes_c23265	reductive pentose-phosphate cycle	other metabolic processes	P	Ribulose bisphosphate carboxylase (RuBisCO) (EC 4.1.1.39)
ruditapes_c23265	oxidation reduction	other metabolic processes	P	Ribulose bisphosphate carboxylase (RuBisCO) (EC 4.1.1.39)
ruditapes_c23265	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Ribulose bisphosphate carboxylase (RuBisCO) (EC 4.1.1.39)
ruditapes_c27534	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c27534	chlorophyll biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c27534	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c27534	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c3110	glutamine metabolic process	other metabolic processes	P	Cobyric acid synthase
ruditapes_c3110	cobalamin biosynthetic process	other metabolic processes	P	Cobyric acid synthase
ruditapes_lrc23796	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc23796	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc37411	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc23796	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc23796	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc37411	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc37411	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc37411	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc23796	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc37411	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc23796	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc37411	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
ruditapes_lrc34780	protein-phycocyanobilin linkage	protein metabolism	P	Chromophore lyase CpcT/CpeT 3 (EC 4.-.-.-)
ruditapes_c1731	glycogen metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c1731	carbohydrate metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c1731	glycogen biosynthetic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c9447	biosynthetic process	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c9447	translational initiation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c9447	methylation	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c9447	translation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c7997	protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c7997	transport	transport	P	Protein translocase subunit SecA
ruditapes_c7997	intracellular protein transport	transport	P	Protein translocase subunit SecA
ruditapes_c7997	protein targeting	transport	P	Protein translocase subunit SecA
ruditapes_c7997	protein import	transport	P	Protein translocase subunit SecA
ruditapes_s36768	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_s36768	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_s36768	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_s36768	tRNA processing	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_lrc24344	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc24344	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc24344	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc24344	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc24344	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc24344	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c24720	adenine catabolic process	other metabolic processes	P	Adenine deaminase 1 (Adenase 1) (Adenine aminase 1) (EC 3.5.4.2)
ruditapes_c25842	oxidation reduction	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes_c25842	heme a biosynthetic process	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes_c25842	heme biosynthetic process	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes_c17507	purine nucleotide metabolic process	other metabolic processes	P	Guanylate kinase (EC 2.7.4.8) (GMP kinase)
ruditapes_c17507	phosphorylation	other metabolic processes	P	Guanylate kinase (EC 2.7.4.8) (GMP kinase)
ruditapes_c15631	cell cycle	cell cycle and proliferation	P	ADP-ribosylation factor-like protein 8B
ruditapes_c15631	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor-like protein 8B
ruditapes_c15631	cell division	other biological processes	P	ADP-ribosylation factor-like protein 8B
ruditapes_c15631	chromosome segregation	other biological processes	P	ADP-ribosylation factor-like protein 8B
ruditapes_c15631	mitosis	cell cycle and proliferation	P	ADP-ribosylation factor-like protein 8B
ruditapes_c15631	mitosis	cell organization and biogenesis	P	ADP-ribosylation factor-like protein 8B
ruditapes_c9050	translation	protein metabolism	P	"Peptide chain release factor 1-like, mitochondrial (Mitochondrial translational release factor 1-like)"
ruditapes_c9050	translational termination	protein metabolism	P	"Peptide chain release factor 1-like, mitochondrial (Mitochondrial translational release factor 1-like)"
ruditapes_c9050	translational termination	cell organization and biogenesis	P	"Peptide chain release factor 1-like, mitochondrial (Mitochondrial translational release factor 1-like)"
ruditapes_lrc38796	negative regulation of sequestering of triglyceride	other biological processes	P	Patatin-like phospholipase domain-containing protein 2 (EC 3.1.1.3) (Adipose triglyceride lipase)
ruditapes_lrc38796	lipid metabolic process	other metabolic processes	P	Patatin-like phospholipase domain-containing protein 2 (EC 3.1.1.3) (Adipose triglyceride lipase)
ruditapes_lrc38796	positive regulation of triglyceride catabolic process	other metabolic processes	P	Patatin-like phospholipase domain-containing protein 2 (EC 3.1.1.3) (Adipose triglyceride lipase)
ruditapes_lrc38796	metabolic process	other metabolic processes	P	Patatin-like phospholipase domain-containing protein 2 (EC 3.1.1.3) (Adipose triglyceride lipase)
ruditapes_lrc38796	lipid catabolic process	other metabolic processes	P	Patatin-like phospholipase domain-containing protein 2 (EC 3.1.1.3) (Adipose triglyceride lipase)
ruditapes_c20754	tRNA processing	RNA metabolism	P	Mitochondrial ribonuclease P protein 1 (Mitochondrial RNase P protein 1) (EC 2.1.1.-) (RNA (guanine-9-)-methyltransferase domain-containing protein 1) (tRNA methyltransferase 10 homolog C)
ruditapes_c20754	methylation	other metabolic processes	P	Mitochondrial ribonuclease P protein 1 (Mitochondrial RNase P protein 1) (EC 2.1.1.-) (RNA (guanine-9-)-methyltransferase domain-containing protein 1) (tRNA methyltransferase 10 homolog C)
ruditapes_c6793	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit e 2 (V-ATPase subunit e 2) (Vacuolar proton pump subunit e 2)
ruditapes_c6793	transport	transport	P	V-type proton ATPase subunit e 2 (V-ATPase subunit e 2) (Vacuolar proton pump subunit e 2)
ruditapes_c6793	proton transport	transport	P	V-type proton ATPase subunit e 2 (V-ATPase subunit e 2) (Vacuolar proton pump subunit e 2)
ruditapes_c6793	ion transport	transport	P	V-type proton ATPase subunit e 2 (V-ATPase subunit e 2) (Vacuolar proton pump subunit e 2)
ruditapes2_c1824	regulation of translation	protein metabolism	P	Neuroguidin (EIF4E-binding protein)
ruditapes_c20349	macromolecule biosynthetic process	other metabolic processes	P	Dolichol phosphate-mannose biosynthesis regulatory protein
ruditapes_c13526	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase haspin (EC 2.7.11.1) (Germ cell-specific gene 2 protein)
ruditapes_c13526	mitotic sister chromatid cohesion	cell cycle and proliferation	P	Serine/threonine-protein kinase haspin (EC 2.7.11.1) (Germ cell-specific gene 2 protein)
ruditapes_c13526	mitotic sister chromatid cohesion	cell organization and biogenesis	P	Serine/threonine-protein kinase haspin (EC 2.7.11.1) (Germ cell-specific gene 2 protein)
ruditapes_c13526	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase haspin (EC 2.7.11.1) (Germ cell-specific gene 2 protein)
ruditapes_c13526	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase haspin (EC 2.7.11.1) (Germ cell-specific gene 2 protein)
ruditapes_c13526	chromatin modification	cell organization and biogenesis	P	Serine/threonine-protein kinase haspin (EC 2.7.11.1) (Germ cell-specific gene 2 protein)
ruditapes2_c2183	meiosis	cell cycle and proliferation	P	Meiosis-specific nuclear structural protein 1
ruditapes_c31848	RNA processing	RNA metabolism	P	"39S ribosomal protein L44, mitochondrial (L44mt) (MRP-L44) (EC 3.1.26.-)"
ruditapes_c8101	cilium axoneme assembly	cell organization and biogenesis	P	Radial spoke head protein 9 homolog
ruditapes_c24392	transport	transport	P	Solute carrier family 22 member 9 (Organic anion transporter 4)
ruditapes_c24392	transmembrane transport	transport	P	Solute carrier family 22 member 9 (Organic anion transporter 4)
ruditapes_c18874	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 10B (26S proteasome AAA-ATPase subunit RPT4) (Proteasome 26S subunit ATPase 6)
ruditapes_c20905	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33306	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33275	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33275	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33275	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc6915	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33306	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c20905	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33306	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33145	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4729	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc6915	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33145	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4729	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc6915	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33145	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c20905	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4729	blood coagulation	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc6915	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33306	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33145	inflammatory response	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes2_lrc4729	fibrinolysis	stress response	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_lrc33275	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c20905	proteolysis	protein metabolism	P	Plasma kallikrein (EC 3.4.21.34) (Fletcher factor) (Kininogenin) (Plasma prekallikrein) [Cleaved into: Plasma kallikrein heavy chain; Plasma kallikrein light chain]
ruditapes_c16163	ER to Golgi vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 1
ruditapes_c16163	vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 1
ruditapes_c16163	transport	transport	P	Trafficking protein particle complex subunit 1
ruditapes_c20863	histidine biosynthetic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes_c20863	metabolic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes_c20863	cellular amino acid biosynthetic process	other metabolic processes	P	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
ruditapes_c19260	chemotaxis	other biological processes	P	Probable chemoreceptor glutamine deamidase CheD (EC 3.5.1.44)
ruditapes_c8877	rRNA methylation	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c8877	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c8877	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c25667	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c25667	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c25667	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c29161	regulation of cell growth	other biological processes	P	Uncharacterized protein KIAA1109 (Fragile site-associated protein)
ruditapes_c29161	regulation of epithelial cell differentiation	developmental processes	P	Uncharacterized protein KIAA1109 (Fragile site-associated protein)
ruditapes_c30004	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase 1 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 1) (GluRS 1)
ruditapes_c30004	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase 1 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 1) (GluRS 1)
ruditapes_c30004	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase 1 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 1) (GluRS 1)
ruditapes_c30004	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase 1 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 1) (GluRS 1)
ruditapes_c30004	translation	protein metabolism	P	Glutamate--tRNA ligase 1 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 1) (GluRS 1)
ruditapes_c30004	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase 1 (EC 6.1.1.17) (Glutamyl-tRNA synthetase 1) (GluRS 1)
ruditapes_c14843	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c14843	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c14843	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c14843	ATP hydrolysis coupled proton transport	transport	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c14843	proton transport	transport	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c14843	transport	transport	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c14843	ATP metabolic process	other metabolic processes	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c14843	ion transport	transport	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c11046	chemotaxis	other biological processes	P	Probable chemoreceptor glutamine deamidase CheD 2 (EC 3.5.1.44)
ruditapes_c8241	rRNA processing	RNA metabolism	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_c8241	ribosome biogenesis	other biological processes	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_c3829	translation	protein metabolism	P	50S ribosomal protein L9
ruditapes_c17472	ubiquinone biosynthetic process	other metabolic processes	P	"Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial (Coenzyme Q biosynthesis protein 4 homolog)"
ruditapes_c17489	transmembrane transport	transport	P	Sodium/glucose cotransporter 4 (Na(+)/glucose cotransporter 4) (hSGLT4) (Solute carrier family 5 member 9)
ruditapes_c17489	ion transport	transport	P	Sodium/glucose cotransporter 4 (Na(+)/glucose cotransporter 4) (hSGLT4) (Solute carrier family 5 member 9)
ruditapes_c17489	sodium ion transport	transport	P	Sodium/glucose cotransporter 4 (Na(+)/glucose cotransporter 4) (hSGLT4) (Solute carrier family 5 member 9)
ruditapes_c17489	transport	transport	P	Sodium/glucose cotransporter 4 (Na(+)/glucose cotransporter 4) (hSGLT4) (Solute carrier family 5 member 9)
ruditapes_c12677	lipopolysaccharide biosynthetic process	other metabolic processes	P	Pseudaminic acid cytidylyltransferase (EC 2.7.7.81) (Pseudaminic acid biosynthesis protein F)
ruditapes_c3667	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c3667	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c2437	transport	transport	P	"Voltage-dependent calcium channel gamma-1 subunit (Dihydropyridine-sensitive L-type, skeletal muscle calcium channel subunit gamma)"
ruditapes_c2437	calcium ion transport	transport	P	"Voltage-dependent calcium channel gamma-1 subunit (Dihydropyridine-sensitive L-type, skeletal muscle calcium channel subunit gamma)"
ruditapes_c2437	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	"Voltage-dependent calcium channel gamma-1 subunit (Dihydropyridine-sensitive L-type, skeletal muscle calcium channel subunit gamma)"
ruditapes_c2437	transmembrane calcium ion transport	transport	P	"Voltage-dependent calcium channel gamma-1 subunit (Dihydropyridine-sensitive L-type, skeletal muscle calcium channel subunit gamma)"
ruditapes_c2437	regulation of transmembrane ion transport	transport	P	"Voltage-dependent calcium channel gamma-1 subunit (Dihydropyridine-sensitive L-type, skeletal muscle calcium channel subunit gamma)"
ruditapes_c2437	ion transport	transport	P	"Voltage-dependent calcium channel gamma-1 subunit (Dihydropyridine-sensitive L-type, skeletal muscle calcium channel subunit gamma)"
ruditapes2_c2353	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes2_c2353	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c28380	oxidation reduction	other metabolic processes	P	Probable glycine dehydrogenase [decarboxylating] subunit 1 (EC 1.4.4.2) (Glycine cleavage system P-protein subunit 1) (Glycine decarboxylase subunit 1)
ruditapes_c16819	RNA methylation	RNA metabolism	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c16819	rRNA processing	RNA metabolism	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c16819	methylation	other metabolic processes	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_lrc13364	transport	transport	P	NADH-quinone oxidoreductase subunit B (EC 1.6.99.5) (NADH dehydrogenase I subunit B) (NDH-1 subunit B)
ruditapes_lrc13364	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit B (EC 1.6.99.5) (NADH dehydrogenase I subunit B) (NDH-1 subunit B)
ruditapes_lrc32632	translation	protein metabolism	P	Translation initiation factor 2 subunit alpha (aIF2-alpha) (eIF-2-alpha)
ruditapes_c4346	translational initiation	protein metabolism	P	Translation initiation factor 2 subunit alpha (aIF2-alpha) (eIF-2-alpha)
ruditapes_lrc32632	translational initiation	protein metabolism	P	Translation initiation factor 2 subunit alpha (aIF2-alpha) (eIF-2-alpha)
ruditapes_s35622	translation	protein metabolism	P	Translation initiation factor 2 subunit alpha (aIF2-alpha) (eIF-2-alpha)
ruditapes_c4346	translation	protein metabolism	P	Translation initiation factor 2 subunit alpha (aIF2-alpha) (eIF-2-alpha)
ruditapes_s35622	translational initiation	protein metabolism	P	Translation initiation factor 2 subunit alpha (aIF2-alpha) (eIF-2-alpha)
ruditapes_c21337	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c21337	biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c21337	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c25259	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c25259	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c25259	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c25259	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c25259	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c17803	nucleoside metabolic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c17803	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c3909	translation	protein metabolism	P	30S ribosomal protein S3
ruditapes_c6133	translation	protein metabolism	P	50S ribosomal protein L13P
ruditapes_c19207	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c19207	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c19207	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c9189	tRNA aminoacylation for protein translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c9189	tRNA aminoacylation for protein translation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c9189	tyrosyl-tRNA aminoacylation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c9189	tyrosyl-tRNA aminoacylation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c9189	translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_s38394	cobalamin biosynthetic process	other metabolic processes	P	"Probable cobyrinic acid A,C-diamide synthase"
ruditapes_s38394	glutamine metabolic process	other metabolic processes	P	"Probable cobyrinic acid A,C-diamide synthase"
ruditapes_c17179	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c17179	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c17179	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c14849	translation	protein metabolism	P	50S ribosomal protein L3
ruditapes_s34109	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_lrc38230	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_lrc38230	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_s34109	RNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_s34109	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_lrc38230	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_lrc38230	RNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_s34109	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c20030	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c20030	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c20030	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c20030	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c28004	positive regulation of Rab GTPase activity	signal transduction	P	Small G protein signaling modulator 1 (RUN and TBC1 domain-containing protein 2)
ruditapes_c28004	regulation of Rab GTPase activity	signal transduction	P	Small G protein signaling modulator 1 (RUN and TBC1 domain-containing protein 2)
ruditapes_c15412	protein folding	protein metabolism	P	T-complex protein 1 subunit eta (TCP-1-eta) (CCT-eta)
ruditapes_c15412	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit eta (TCP-1-eta) (CCT-eta)
ruditapes_c17817	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase theta-1 (EC 2.5.1.18) (GST class-theta-1)
ruditapes2_c567	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase theta-1 (EC 2.5.1.18) (GST class-theta-1)
ruditapes_c22453	cell differentiation	other biological processes	P	Kinesin-like protein KIF2A
ruditapes_c22453	mitosis	cell cycle and proliferation	P	Kinesin-like protein KIF2A
ruditapes_c22453	mitosis	cell organization and biogenesis	P	Kinesin-like protein KIF2A
ruditapes_c22453	cell division	other biological processes	P	Kinesin-like protein KIF2A
ruditapes_c22453	mitotic spindle organization	cell cycle and proliferation	P	Kinesin-like protein KIF2A
ruditapes_c22453	mitotic spindle organization	cell organization and biogenesis	P	Kinesin-like protein KIF2A
ruditapes_c22453	multicellular organismal development	developmental processes	P	Kinesin-like protein KIF2A
ruditapes_c22453	microtubule-based movement	other biological processes	P	Kinesin-like protein KIF2A
ruditapes_c22453	cell cycle	cell cycle and proliferation	P	Kinesin-like protein KIF2A
ruditapes_c22453	nervous system development	developmental processes	P	Kinesin-like protein KIF2A
ruditapes_c23312	multicellular organismal development	developmental processes	P	Cleft lip and palate transmembrane protein 1 homolog
ruditapes_c23312	cell differentiation	other biological processes	P	Cleft lip and palate transmembrane protein 1 homolog
ruditapes_c27974	genetic imprinting	other metabolic processes	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	positive regulation of heart contraction	other biological processes	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	positive regulation of peptidyl-threonine phosphorylation	protein metabolism	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	positive regulation of cAMP biosynthetic process	other metabolic processes	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	Wnt receptor signaling pathway	signal transduction	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	negative regulation of TOR signaling pathway	signal transduction	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	glycogen metabolic process	other metabolic processes	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	nervous system development	developmental processes	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	protein amino acid phosphorylation	protein metabolism	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	phosphorylation	other metabolic processes	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	cellular response to insulin stimulus	other biological processes	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	negative regulation of glucose import	transport	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	negative regulation of signal transduction	signal transduction	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	negative regulation of transferase activity	other biological processes	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	hypermethylation of CpG island	DNA metabolism	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	insulin receptor signaling pathway	signal transduction	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	regulation of systemic arterial blood pressure	other biological processes	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	carbohydrate metabolic process	other metabolic processes	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	negative regulation of insulin receptor signaling pathway	signal transduction	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c27974	cell migration	other biological processes	P	Glycogen synthase kinase-3 alpha (GSK-3 alpha) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3A) (EC 2.7.11.1)
ruditapes_c10287	ion transport	transport	P	Low affinity potassium transport system protein kup (Kup system potassium uptake protein)
ruditapes_c10287	transport	transport	P	Low affinity potassium transport system protein kup (Kup system potassium uptake protein)
ruditapes_c10287	potassium ion transport	transport	P	Low affinity potassium transport system protein kup (Kup system potassium uptake protein)
ruditapes_c23214	cellular amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c23214	oxidation reduction	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c23214	branched chain family amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes2_lrc4356	oxidation reduction	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes2_lrc4356	metabolic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes2_lrc4356	lipid biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes2_lrc4356	lipid A biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes2_lrc4356	biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes2_lrc4356	cellular metabolic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes2_lrc4356	methylation	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes2_lrc4356	response to antibiotic	other biological processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes2_lrc4356	lipopolysaccharide biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c3942	tRNA processing	RNA metabolism	P	tRNA 2-thiocytidine biosynthesis protein TtcA
ruditapes_c31169	tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c31169	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c31169	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c31169	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c31169	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c31169	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c17357	cell cycle	cell cycle and proliferation	P	Chromosome partition protein MukB (Structural maintenance of chromosome-related protein)
ruditapes_c17357	cell division	other biological processes	P	Chromosome partition protein MukB (Structural maintenance of chromosome-related protein)
ruditapes_c17357	chromosome segregation	other biological processes	P	Chromosome partition protein MukB (Structural maintenance of chromosome-related protein)
ruditapes_c17357	chromosome condensation	cell organization and biogenesis	P	Chromosome partition protein MukB (Structural maintenance of chromosome-related protein)
ruditapes_c23783	lipoate biosynthetic process	other metabolic processes	P	Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA)
ruditapes_c20639	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c20639	thiamin biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c20639	terpenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c20639	metabolic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c14311	regulation of translation	protein metabolism	P	Secretion monitor
ruditapes2_c3029	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes2_c3029	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes2_c3029	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes2_c3029	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c25191	cell adhesion	cell adhesion	P	SCO-spondin
ruditapes2_c670	cell adhesion	cell adhesion	P	SCO-spondin
ruditapes2_c755	heme oxidation	other metabolic processes	P	Heme oxygenase 2 (HO-2) (EC 1.14.99.3)
ruditapes2_c755	oxidation reduction	other metabolic processes	P	Heme oxygenase 2 (HO-2) (EC 1.14.99.3)
ruditapes_lrc25300	positive regulation of GTPase activity	other biological processes	P	Ral GTPase-activating protein subunit alpha-2 (250 kDa substrate of Akt) (AS250) (p220)
ruditapes_lrc25300	regulation of small GTPase mediated signal transduction	signal transduction	P	Ral GTPase-activating protein subunit alpha-2 (250 kDa substrate of Akt) (AS250) (p220)
ruditapes_lrc25300	activation of Ral GTPase activity	signal transduction	P	Ral GTPase-activating protein subunit alpha-2 (250 kDa substrate of Akt) (AS250) (p220)
ruditapes_c19503	chitin catabolic process	other metabolic processes	P	Chitinase-like protein Idgf5 (Imaginal disk growth factor protein 5)
ruditapes_c19503	multicellular organismal development	developmental processes	P	Chitinase-like protein Idgf5 (Imaginal disk growth factor protein 5)
ruditapes_c19503	carbohydrate metabolic process	other metabolic processes	P	Chitinase-like protein Idgf5 (Imaginal disk growth factor protein 5)
ruditapes_c11596	multicellular organismal development	developmental processes	P	Chitinase-like protein Idgf1 (Imaginal disk growth factor protein 1)
ruditapes_c11596	carbohydrate metabolic process	other metabolic processes	P	Chitinase-like protein Idgf1 (Imaginal disk growth factor protein 1)
ruditapes_c11596	chitin catabolic process	other metabolic processes	P	Chitinase-like protein Idgf1 (Imaginal disk growth factor protein 1)
ruditapes_c30442	nervous system development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 24 (Mediator complex subunit 24) (Protein lessen) (Thyroid hormone receptor-associated protein 4 homolog) (Trap100 homolog)
ruditapes_c30442	multicellular organismal development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 24 (Mediator complex subunit 24) (Protein lessen) (Thyroid hormone receptor-associated protein 4 homolog) (Trap100 homolog)
ruditapes_c30442	retinal cone cell development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 24 (Mediator complex subunit 24) (Protein lessen) (Thyroid hormone receptor-associated protein 4 homolog) (Trap100 homolog)
ruditapes_c30442	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 24 (Mediator complex subunit 24) (Protein lessen) (Thyroid hormone receptor-associated protein 4 homolog) (Trap100 homolog)
ruditapes_c30442	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 24 (Mediator complex subunit 24) (Protein lessen) (Thyroid hormone receptor-associated protein 4 homolog) (Trap100 homolog)
ruditapes_c30442	cell differentiation	other biological processes	P	Mediator of RNA polymerase II transcription subunit 24 (Mediator complex subunit 24) (Protein lessen) (Thyroid hormone receptor-associated protein 4 homolog) (Trap100 homolog)
ruditapes_c30442	thymus development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 24 (Mediator complex subunit 24) (Protein lessen) (Thyroid hormone receptor-associated protein 4 homolog) (Trap100 homolog)
ruditapes_c30442	enteric nervous system development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 24 (Mediator complex subunit 24) (Protein lessen) (Thyroid hormone receptor-associated protein 4 homolog) (Trap100 homolog)
ruditapes_c2452	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 4 (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes2_c1381	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 4 (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes_c2452	cell adhesion	cell adhesion	P	Protocadherin Fat 4 (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes2_c1381	cell adhesion	cell adhesion	P	Protocadherin Fat 4 (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes_c19064	G-protein coupled receptor protein signaling pathway	signal transduction	P	EGF-like module-containing mucin-like hormone receptor-like 2 (EGF-like module receptor 2) (CD antigen CD312)
ruditapes_c19064	cell surface receptor linked signal transduction	signal transduction	P	EGF-like module-containing mucin-like hormone receptor-like 2 (EGF-like module receptor 2) (CD antigen CD312)
ruditapes_c19064	cell adhesion	cell adhesion	P	EGF-like module-containing mucin-like hormone receptor-like 2 (EGF-like module receptor 2) (CD antigen CD312)
ruditapes_c19064	signal transduction	signal transduction	P	EGF-like module-containing mucin-like hormone receptor-like 2 (EGF-like module receptor 2) (CD antigen CD312)
ruditapes_c19064	neuropeptide signaling pathway	signal transduction	P	EGF-like module-containing mucin-like hormone receptor-like 2 (EGF-like module receptor 2) (CD antigen CD312)
ruditapes_c16223	proteolysis	protein metabolism	P	Zinc metalloproteinase-disintegrin (EC 3.4.24.-) (Snake venom metalloproteinase) (SVMP)
ruditapes_c18998	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	iridophore differentiation	other biological processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	embryonic neurocranium morphogenesis	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	regulation of myeloid leukocyte differentiation	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	kidney development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	neuron differentiation	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	embryonic pectoral fin morphogenesis	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	forebrain development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	midbrain development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	neural crest cell development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	endoderm development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	multicellular organismal development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c18998	embryonic viscerocranium morphogenesis	developmental processes	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12) (Protein kohtalo) (Protein motionless) (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230)
ruditapes_c35311	proteolysis	protein metabolism	P	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp)
ruditapes2_c1074	sensory perception of sound	other biological processes	P	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)
ruditapes2_c1074	photoreceptor cell maintenance	other biological processes	P	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)
ruditapes2_c1074	sensory perception of light stimulus	other biological processes	P	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)
ruditapes2_c1074	visual perception	other biological processes	P	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)
ruditapes2_c1074	maintenance of organ identity	developmental processes	P	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)
ruditapes2_c1074	response to stimulus	other biological processes	P	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)
ruditapes2_c1074	inner ear receptor cell differentiation	developmental processes	P	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)
ruditapes_c17211	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_s40456	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc36776	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc36952	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc35723	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_s38935	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes2_c392	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_c27137	protein amino acid phosphorylation	protein metabolism	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c27137	phosphorylation	other metabolic processes	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c27137	multicellular organismal development	developmental processes	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes_c27137	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)
ruditapes2_c3028	oxidation reduction	other metabolic processes	P	UDP-glucose 6-dehydrogenase 4 (UDP-Glc dehydrogenase 4) (UDP-GlcDH 4) (UDPGDH 4) (EC 1.1.1.22) (Os-UGD4)
ruditapes_c25170	response to copper ion	other biological processes	P	Laccase-24 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 24) (Diphenol oxidase 24) (Urishiol oxidase 24)
ruditapes_c25170	oxidation reduction	other metabolic processes	P	Laccase-24 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 24) (Diphenol oxidase 24) (Urishiol oxidase 24)
ruditapes_c25170	vegetative to reproductive phase transition	developmental processes	P	Laccase-24 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 24) (Diphenol oxidase 24) (Urishiol oxidase 24)
ruditapes_c25170	lignin catabolic process	other metabolic processes	P	Laccase-24 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 24) (Diphenol oxidase 24) (Urishiol oxidase 24)
ruditapes_lrc27612	lignin catabolic process	other metabolic processes	P	Laccase-21 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 21) (Diphenol oxidase 21) (Urishiol oxidase 21)
ruditapes_lrc27612	oxidation reduction	other metabolic processes	P	Laccase-21 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 21) (Diphenol oxidase 21) (Urishiol oxidase 21)
ruditapes_c24546	response to cadmium ion	other biological processes	P	Alcohol dehydrogenase 1 (EC 1.1.1.1)
ruditapes_c24546	response to osmotic stress	stress response	P	Alcohol dehydrogenase 1 (EC 1.1.1.1)
ruditapes_c24546	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase 1 (EC 1.1.1.1)
ruditapes_c24546	response to salt stress	stress response	P	Alcohol dehydrogenase 1 (EC 1.1.1.1)
ruditapes_c24546	response to hypoxia	stress response	P	Alcohol dehydrogenase 1 (EC 1.1.1.1)
ruditapes_c28468	translation	protein metabolism	P	30S ribosomal protein S17
ruditapes_c31487	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c31487	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c31487	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c31487	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c31487	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_s39473	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_s39473	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c28972	gluconeogenesis	other metabolic processes	P	Phosphoenolpyruvate carboxykinase [ATP] 2 (PEP carboxykinase 2) (PEPCK) (EC 4.1.1.49) (Phosphoenolpyruvate carboxylase 2)
ruditapes_c25283	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c35994	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c35994	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c35994	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c35994	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c25283	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c25283	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c25283	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c35994	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c35994	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c25283	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c25283	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c35994	metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c25283	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c25283	metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c35994	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c23487	oxidation reduction	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c23487	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c28049	oxidation reduction	other metabolic processes	P	Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster protein) (HCP)
ruditapes_c7173	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c7173	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c9967	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c9967	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c9967	cell division	other biological processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c9967	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c9967	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c9967	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_s38433	sodium ion transport	transport	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes_s38433	transport	transport	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes_s38433	regulation of pH	other biological processes	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes_s38433	ion transport	transport	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes_c15482	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c8699	GTP catabolic process	other metabolic processes	P	Peptide chain release factor 3 (RF-3)
ruditapes_c8699	translational termination	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_c8699	translational termination	cell organization and biogenesis	P	Peptide chain release factor 3 (RF-3)
ruditapes_c8699	translation	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_c1460	cellular amino acid metabolic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c1460	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c1460	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c7925	carbohydrate metabolic process	other metabolic processes	P	"Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase (GMPMT) (EC 2.4.99.16) ((1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase)"
ruditapes_c19525	transport	transport	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes_c19525	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes_c12703	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a 2 (ATP synthase F0 sector subunit a 2) (F-ATPase subunit 6 2)
ruditapes_c12703	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a 2 (ATP synthase F0 sector subunit a 2) (F-ATPase subunit 6 2)
ruditapes_c12703	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a 2 (ATP synthase F0 sector subunit a 2) (F-ATPase subunit 6 2)
ruditapes_c12703	transport	transport	P	ATP synthase subunit a 2 (ATP synthase F0 sector subunit a 2) (F-ATPase subunit 6 2)
ruditapes_c12703	proton transport	transport	P	ATP synthase subunit a 2 (ATP synthase F0 sector subunit a 2) (F-ATPase subunit 6 2)
ruditapes_c12703	ion transport	transport	P	ATP synthase subunit a 2 (ATP synthase F0 sector subunit a 2) (F-ATPase subunit 6 2)
ruditapes_c12347	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c12347	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c12347	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c12347	cell division	other biological processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c12347	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c12347	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_lrc30561	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c29388	metabolic process	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_c29388	phosphorylation	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_c6727	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chemotaxis response regulator protein-glutamate methylesterase 2 (EC 3.1.1.61)
ruditapes_c6727	chemotaxis	other biological processes	P	Chemotaxis response regulator protein-glutamate methylesterase 2 (EC 3.1.1.61)
ruditapes_c6727	two-component signal transduction system (phosphorelay)	signal transduction	P	Chemotaxis response regulator protein-glutamate methylesterase 2 (EC 3.1.1.61)
ruditapes_c26876	translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c26876	tRNA aminoacylation for protein translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c26876	tRNA aminoacylation for protein translation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c26876	asparaginyl-tRNA aminoacylation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c26876	asparaginyl-tRNA aminoacylation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes_c20506	polyamine transport	transport	P	Spermidine/putrescine import ATP-binding protein PotA (EC 3.6.3.31)
ruditapes_c20506	ATP catabolic process	other metabolic processes	P	Spermidine/putrescine import ATP-binding protein PotA (EC 3.6.3.31)
ruditapes_c20506	transport	transport	P	Spermidine/putrescine import ATP-binding protein PotA (EC 3.6.3.31)
ruditapes2_c1681	arginine metabolic process	other metabolic processes	P	N-succinylarginine dihydrolase (EC 3.5.3.23)
ruditapes_c24508	ATP catabolic process	other metabolic processes	P	Putative ribose/galactose/methyl galactoside import ATP-binding protein (EC 3.6.3.17)
ruditapes_c24508	transport	transport	P	Putative ribose/galactose/methyl galactoside import ATP-binding protein (EC 3.6.3.17)
ruditapes_c24508	carbohydrate transport	transport	P	Putative ribose/galactose/methyl galactoside import ATP-binding protein (EC 3.6.3.17)
ruditapes_c29593	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c29593	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c29593	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c29593	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c29593	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c18651	ciliary or flagellar motility	other biological processes	P	Tektin-2
ruditapes_c18651	microtubule cytoskeleton organization	cell organization and biogenesis	P	Tektin-2
ruditapes_c18651	sperm motility	other biological processes	P	Tektin-2
ruditapes_c17282	transepithelial ammonium transport	transport	P	Ammonium transporter Rh type C (Rhesus blood group family type C glycoprotein) (Rh family type C glycoprotein) (Rh type C glycoprotein)
ruditapes_c17282	ammonium transport	transport	P	Ammonium transporter Rh type C (Rhesus blood group family type C glycoprotein) (Rh family type C glycoprotein) (Rh type C glycoprotein)
ruditapes_c17282	transmembrane transport	transport	P	Ammonium transporter Rh type C (Rhesus blood group family type C glycoprotein) (Rh family type C glycoprotein) (Rh type C glycoprotein)
ruditapes_c17282	cellular ion homeostasis	other biological processes	P	Ammonium transporter Rh type C (Rhesus blood group family type C glycoprotein) (Rh family type C glycoprotein) (Rh type C glycoprotein)
ruditapes_c17282	regulation of pH	other biological processes	P	Ammonium transporter Rh type C (Rhesus blood group family type C glycoprotein) (Rh family type C glycoprotein) (Rh type C glycoprotein)
ruditapes_c17282	transport	transport	P	Ammonium transporter Rh type C (Rhesus blood group family type C glycoprotein) (Rh family type C glycoprotein) (Rh type C glycoprotein)
ruditapes_lrc17467	microtubule cytoskeleton organization	cell organization and biogenesis	P	Tektin-4
ruditapes_lrc17467	cell projection organization	cell organization and biogenesis	P	Tektin-4
ruditapes_c9644	post-translational protein modification	protein metabolism	P	"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.131) (Asparagine-linked glycosylation protein 11 homolog) (Glycolipid 2-alpha-mannosyltransferase)"
ruditapes_c9644	cellular protein metabolic process	protein metabolism	P	"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.131) (Asparagine-linked glycosylation protein 11 homolog) (Glycolipid 2-alpha-mannosyltransferase)"
ruditapes_c9644	dolichol-linked oligosaccharide biosynthetic process	protein metabolism	P	"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.131) (Asparagine-linked glycosylation protein 11 homolog) (Glycolipid 2-alpha-mannosyltransferase)"
ruditapes_c9644	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.131) (Asparagine-linked glycosylation protein 11 homolog) (Glycolipid 2-alpha-mannosyltransferase)"
ruditapes_c9644	biosynthetic process	other metabolic processes	P	"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.131) (Asparagine-linked glycosylation protein 11 homolog) (Glycolipid 2-alpha-mannosyltransferase)"
ruditapes_lrc38283	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative elongator complex protein 1 (ELP1) (IkappaB kinase complex-associated protein) (IKK complex-associated protein)
ruditapes_lrc38283	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Putative elongator complex protein 1 (ELP1) (IkappaB kinase complex-associated protein) (IKK complex-associated protein)
ruditapes_lrc38283	"transcription, DNA-dependent"	RNA metabolism	P	Putative elongator complex protein 1 (ELP1) (IkappaB kinase complex-associated protein) (IKK complex-associated protein)
ruditapes_c23093	autophagic vacuole formation	stress response	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12) (APG12-like)
ruditapes_c23093	autophagic vacuole formation	other metabolic processes	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12) (APG12-like)
ruditapes_c23093	autophagic vacuole formation	cell organization and biogenesis	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12) (APG12-like)
ruditapes_c23093	autophagy	other metabolic processes	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12) (APG12-like)
ruditapes2_lrc5681	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a
ruditapes_s36167	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a
ruditapes_s39680	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a
ruditapes2_c180	chaperone mediated protein folding independent of cofactor	protein metabolism	P	Prefoldin subunit 4
ruditapes2_c180	protein folding	protein metabolism	P	Prefoldin subunit 4
ruditapes_c24995	RNA catabolic process	RNA metabolism	P	Ribonuclease H2 subunit A (RNase H2 subunit A) (EC 3.1.26.4) (Ribonuclease HI large subunit) (RNase HI large subunit) (Ribonuclease HI subunit A)
ruditapes_c24995	RNA metabolic process	RNA metabolism	P	Ribonuclease H2 subunit A (RNase H2 subunit A) (EC 3.1.26.4) (Ribonuclease HI large subunit) (RNase HI large subunit) (Ribonuclease HI subunit A)
ruditapes_c17998	response to organophosphorus	other biological processes	P	Replication factor C subunit 3 (Activator 1 38 kDa subunit) (A1 38 kDa subunit) (Activator 1 subunit 3) (Replication factor C 38 kDa subunit) (RF-C 38 kDa subunit) (RFC38)
ruditapes_c17998	ATP catabolic process	other metabolic processes	P	Replication factor C subunit 3 (Activator 1 38 kDa subunit) (A1 38 kDa subunit) (Activator 1 subunit 3) (Replication factor C 38 kDa subunit) (RF-C 38 kDa subunit) (RFC38)
ruditapes_c17998	DNA replication	DNA metabolism	P	Replication factor C subunit 3 (Activator 1 38 kDa subunit) (A1 38 kDa subunit) (Activator 1 subunit 3) (Replication factor C 38 kDa subunit) (RF-C 38 kDa subunit) (RFC38)
ruditapes_c15237	oxidation reduction	other metabolic processes	P	Hydroxysteroid dehydrogenase-like protein 2 (EC 1.-.-.-)
ruditapes_c15237	metabolic process	other metabolic processes	P	Hydroxysteroid dehydrogenase-like protein 2 (EC 1.-.-.-)
ruditapes_c15237	biological_process	other biological processes	P	Hydroxysteroid dehydrogenase-like protein 2 (EC 1.-.-.-)
ruditapes_c17842	mRNA processing	RNA metabolism	P	Protein cft1 (Cleavage factor two protein 1)
ruditapes_c15252	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase set9 (EC 2.1.1.43) (SET domain protein 9)
ruditapes_c15252	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase set9 (EC 2.1.1.43) (SET domain protein 9)
ruditapes_c15252	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase set9 (EC 2.1.1.43) (SET domain protein 9)
ruditapes_c15252	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase set9 (EC 2.1.1.43) (SET domain protein 9)
ruditapes_c12562	methylation	other metabolic processes	P	Arginine N-methyltransferase 2 (EC 2.1.1.-)
ruditapes_c18348	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 4 (PPIase) (EC 5.2.1.8) (Rotamase)
ruditapes_c18348	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 4 (PPIase) (EC 5.2.1.8) (Rotamase)
ruditapes_c21465	transport	transport	P	Exportin-T (Exportin(tRNA)) (Karyopherin-beta) (tRNA exportin)
ruditapes_c21465	tRNA processing	RNA metabolism	P	Exportin-T (Exportin(tRNA)) (Karyopherin-beta) (tRNA exportin)
ruditapes_c7162	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase mpkC (MAP kinase C) (EC 2.7.11.24)
ruditapes_c7162	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase mpkC (MAP kinase C) (EC 2.7.11.24)
ruditapes_c6237	GPI anchor biosynthetic process	protein metabolism	P	GPI ethanolamine phosphate transferase 2 (EC 2.-.-.-) (Glycosylphosphatidylinositol-anchor biosynthesis protein 7)
ruditapes_c6237	metabolic process	other metabolic processes	P	GPI ethanolamine phosphate transferase 2 (EC 2.-.-.-) (Glycosylphosphatidylinositol-anchor biosynthesis protein 7)
ruditapes_c11198	DNA repair	stress response	P	Structure-specific endonuclease subunit slx1 (EC 3.6.1.-)
ruditapes_c11198	DNA repair	DNA metabolism	P	Structure-specific endonuclease subunit slx1 (EC 3.6.1.-)
ruditapes_c11198	DNA recombination	DNA metabolism	P	Structure-specific endonuclease subunit slx1 (EC 3.6.1.-)
ruditapes_c11198	response to DNA damage stimulus	stress response	P	Structure-specific endonuclease subunit slx1 (EC 3.6.1.-)
ruditapes_c9627	autophagy	other metabolic processes	P	Autophagy protein 5
ruditapes_c9627	protein transport	transport	P	Autophagy protein 5
ruditapes_c9627	transport	transport	P	Autophagy protein 5
ruditapes_c21537	carbohydrate metabolic process	other metabolic processes	P	"Probable 1,4-beta-D-glucan cellobiohydrolase A (EC 3.2.1.91) (Beta-glucancellobiohydrolase A) (Cellobiohydrolase D) (Exocellobiohydrolase A) (Exoglucanase A)"
ruditapes_c21537	polysaccharide catabolic process	other metabolic processes	P	"Probable 1,4-beta-D-glucan cellobiohydrolase A (EC 3.2.1.91) (Beta-glucancellobiohydrolase A) (Cellobiohydrolase D) (Exocellobiohydrolase A) (Exoglucanase A)"
ruditapes_c21537	cellulose catabolic process	other metabolic processes	P	"Probable 1,4-beta-D-glucan cellobiohydrolase A (EC 3.2.1.91) (Beta-glucancellobiohydrolase A) (Cellobiohydrolase D) (Exocellobiohydrolase A) (Exoglucanase A)"
ruditapes_c21537	metabolic process	other metabolic processes	P	"Probable 1,4-beta-D-glucan cellobiohydrolase A (EC 3.2.1.91) (Beta-glucancellobiohydrolase A) (Cellobiohydrolase D) (Exocellobiohydrolase A) (Exoglucanase A)"
ruditapes_c7488	translation	protein metabolism	P	ATP-dependent RNA helicase ded1 (EC 3.6.4.13)
ruditapes_c7488	translational initiation	protein metabolism	P	ATP-dependent RNA helicase ded1 (EC 3.6.4.13)
ruditapes_c37570	translation	protein metabolism	P	"Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)"
ruditapes_c3938	polysaccharide catabolic process	other metabolic processes	P	Probable beta-glucosidase F (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase F) (Cellobiase F) (Gentiobiase F)
ruditapes_c3938	carbohydrate metabolic process	other metabolic processes	P	Probable beta-glucosidase F (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase F) (Cellobiase F) (Gentiobiase F)
ruditapes_c3938	cellulose catabolic process	other metabolic processes	P	Probable beta-glucosidase F (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase F) (Cellobiase F) (Gentiobiase F)
ruditapes_c3938	metabolic process	other metabolic processes	P	Probable beta-glucosidase F (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase F) (Cellobiase F) (Gentiobiase F)
ruditapes_c28785	nucleotide-excision repair	stress response	P	Protein png1
ruditapes_c28785	nucleotide-excision repair	DNA metabolism	P	Protein png1
ruditapes_c25880	polysaccharide catabolic process	other metabolic processes	P	"Probable endo-beta-1,4-glucanase D (Endoglucanase D) (EC 3.2.1.4) (Carboxymethylcellulase D) (Cellulase D)"
ruditapes_c25880	carbohydrate metabolic process	other metabolic processes	P	"Probable endo-beta-1,4-glucanase D (Endoglucanase D) (EC 3.2.1.4) (Carboxymethylcellulase D) (Cellulase D)"
ruditapes_c25880	cellulose catabolic process	other metabolic processes	P	"Probable endo-beta-1,4-glucanase D (Endoglucanase D) (EC 3.2.1.4) (Carboxymethylcellulase D) (Cellulase D)"
ruditapes_c25880	metabolic process	other metabolic processes	P	"Probable endo-beta-1,4-glucanase D (Endoglucanase D) (EC 3.2.1.4) (Carboxymethylcellulase D) (Cellulase D)"
ruditapes_c25791	polysaccharide catabolic process	other metabolic processes	P	Probable alpha-fucosidase A (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase A)
ruditapes_c25791	carbohydrate metabolic process	other metabolic processes	P	Probable alpha-fucosidase A (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase A)
ruditapes_c25791	metabolic process	other metabolic processes	P	Probable alpha-fucosidase A (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase A)
ruditapes2_c2300	regulation of translation	protein metabolism	P	"ATP-dependent RNA helicase mss116, mitochondrial (EC 3.6.4.13)"
ruditapes2_c2300	mRNA processing	RNA metabolism	P	"ATP-dependent RNA helicase mss116, mitochondrial (EC 3.6.4.13)"
ruditapes2_c2300	RNA splicing	RNA metabolism	P	"ATP-dependent RNA helicase mss116, mitochondrial (EC 3.6.4.13)"
ruditapes_c25465	cell adhesion	cell adhesion	P	Collagen alpha-1(XXVIII) chain
ruditapes_c25465	negative regulation of peptidase activity	other biological processes	P	Collagen alpha-1(XXVIII) chain
ruditapes_c29326	biological_process	other biological processes	P	Collagen alpha-1(XXVIII) chain
ruditapes_c29326	negative regulation of peptidase activity	other biological processes	P	Collagen alpha-1(XXVIII) chain
ruditapes_c29326	cell adhesion	cell adhesion	P	Collagen alpha-1(XXVIII) chain
ruditapes_c9570	G-protein coupled receptor protein signaling pathway	signal transduction	P	Gonadotropin-releasing hormone receptor (GnRH receptor) (GnRH-R) (oct-GnRHR)
ruditapes_c9570	signal transduction	signal transduction	P	Gonadotropin-releasing hormone receptor (GnRH receptor) (GnRH-R) (oct-GnRHR)
ruditapes_c27365	biological_process	other biological processes	P	Uncharacterized protein YIL156W-B
ruditapes_c2623	defense response to fungus	stress response	P	Defensin-like protein 45
ruditapes_c2623	defense response	stress response	P	Defensin-like protein 45
ruditapes_c2623	killing of cells of another organism	other biological processes	P	Defensin-like protein 45
ruditapes2_lrc5592	transmembrane transport	transport	P	SPX domain-containing membrane protein At1g63010
ruditapes_c17296	translation	protein metabolism	P	60S ribosomal protein L35
ruditapes_c19487	lipid transport	transport	P	Vitellogenin-3
ruditapes_c19487	biological_process	other biological processes	P	Vitellogenin-3
ruditapes2_c657	biological_process	other biological processes	P	Vitellogenin-2
ruditapes2_c657	lipid transport	transport	P	Vitellogenin-2
ruditapes_c10387	protein folding	protein metabolism	P	Chaperone protein DnaK (HSP70) (Heat shock 70 kDa protein) (Heat shock protein 70)
ruditapes_c10387	response to stress	stress response	P	Chaperone protein DnaK (HSP70) (Heat shock 70 kDa protein) (Heat shock protein 70)
ruditapes_c17520	protein modification process	protein metabolism	P	Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (L-isoaspartyl protein carboxyl methyltransferase) (Protein L-isoaspartyl methyltransferase) (Protein-beta-aspartate methyltransferase) (PIMT)
ruditapes_c17520	methylation	other metabolic processes	P	Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (L-isoaspartyl protein carboxyl methyltransferase) (Protein L-isoaspartyl methyltransferase) (Protein-beta-aspartate methyltransferase) (PIMT)
ruditapes_c14110	fatty acid biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_c14110	lipid A biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_c14110	lipid biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_c17549	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c17549	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c17549	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c17549	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c17549	tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c17549	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c28837	regulation of transmembrane ion transport	transport	P	Sodium channel protein type 4 subunit alpha B (Voltage-gated sodium channel subunit alpha Nav1.4b)
ruditapes_c28837	ion transport	transport	P	Sodium channel protein type 4 subunit alpha B (Voltage-gated sodium channel subunit alpha Nav1.4b)
ruditapes_c28837	sodium ion transport	transport	P	Sodium channel protein type 4 subunit alpha B (Voltage-gated sodium channel subunit alpha Nav1.4b)
ruditapes_c28837	transport	transport	P	Sodium channel protein type 4 subunit alpha B (Voltage-gated sodium channel subunit alpha Nav1.4b)
ruditapes_c28837	transmembrane transport	transport	P	Sodium channel protein type 4 subunit alpha B (Voltage-gated sodium channel subunit alpha Nav1.4b)
ruditapes_c23239	sodium ion transport	transport	P	Sodium channel protein type 4 subunit alpha A (Voltage-gated sodium channel subunit alpha Nav1.4a)
ruditapes_c23239	transport	transport	P	Sodium channel protein type 4 subunit alpha A (Voltage-gated sodium channel subunit alpha Nav1.4a)
ruditapes_c23239	regulation of transmembrane ion transport	transport	P	Sodium channel protein type 4 subunit alpha A (Voltage-gated sodium channel subunit alpha Nav1.4a)
ruditapes_c23239	transmembrane transport	transport	P	Sodium channel protein type 4 subunit alpha A (Voltage-gated sodium channel subunit alpha Nav1.4a)
ruditapes_c23239	ion transport	transport	P	Sodium channel protein type 4 subunit alpha A (Voltage-gated sodium channel subunit alpha Nav1.4a)
ruditapes_c22117	transport	transport	P	Synaptic vesicle 2-related protein (SV2-related protein)
ruditapes_c22117	transmembrane transport	transport	P	Synaptic vesicle 2-related protein (SV2-related protein)
ruditapes_c25924	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase VP2 (EC 2.7.7.48)
ruditapes_c13119	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c13119	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c13119	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_lrc24599	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_lrc24599	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c5090	rRNA processing	RNA metabolism	P	Ribosome-binding factor A
ruditapes_lrc36305	oxidation reduction	other metabolic processes	P	Flagellar brake protein YcgR (Cyclic di-GMP binding protein YcgR)
ruditapes_lrc35986	oxidation reduction	other metabolic processes	P	Flagellar brake protein YcgR (Cyclic di-GMP binding protein YcgR)
ruditapes_c5050	oxidation reduction	other metabolic processes	P	Flagellar brake protein YcgR (Cyclic di-GMP binding protein YcgR)
ruditapes_c1573	iron-sulfur cluster assembly	other metabolic processes	P	Putative iron-sulfur cluster insertion protein ErpA
ruditapes_lrc39780	tRNA processing	RNA metabolism	P	tRNA 2-thiocytidine biosynthesis protein TtcA
ruditapes_c19674	tRNA processing	RNA metabolism	P	tRNA 2-thiocytidine biosynthesis protein TtcA
ruditapes_c19289	tRNA aminoacylation for protein translation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c19289	tyrosyl-tRNA aminoacylation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c19289	tyrosyl-tRNA aminoacylation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c19289	translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c19289	tRNA aminoacylation for protein translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c3565	translation	protein metabolism	P	"39S ribosomal protein L48, mitochondrial (L48mt) (MRP-L48)"
ruditapes2_c847	translation	protein metabolism	P	"39S ribosomal protein L48, mitochondrial (L48mt) (MRP-L48)"
ruditapes_c16680	response to DNA damage stimulus	stress response	P	DNA damage-binding protein 2 (Damage-specific DNA-binding protein 2)
ruditapes_c16680	DNA repair	stress response	P	DNA damage-binding protein 2 (Damage-specific DNA-binding protein 2)
ruditapes_c16680	DNA repair	DNA metabolism	P	DNA damage-binding protein 2 (Damage-specific DNA-binding protein 2)
ruditapes_lrc35720	translation	protein metabolism	P	60S ribosomal protein L6
ruditapes_c17904	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c17904	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c17904	viral infectious cycle	other biological processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c17904	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c17904	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c17904	methylation	other metabolic processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c17904	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c17904	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c17904	metabolic process	other metabolic processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c17904	RNA metabolic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c17904	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_c17904	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Capsid protein C (Core protein); prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Non-structural protein 2A-alpha; Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
ruditapes_lrc18606	ATP catabolic process	other metabolic processes	P	Putative multidrug export ATP-binding/permease protein SAB1799c (EC 3.6.3.-)
ruditapes_lrc18606	transport	transport	P	Putative multidrug export ATP-binding/permease protein SAB1799c (EC 3.6.3.-)
ruditapes_lrc18606	transmembrane transport	transport	P	Putative multidrug export ATP-binding/permease protein SAB1799c (EC 3.6.3.-)
ruditapes_c3975	carotenoid biosynthetic process	other metabolic processes	P	"Glycosyl-4,4'-diaponeurosporenoate acyltransferase (EC 2.3.1.-)"
ruditapes_c3299	lipoate biosynthetic process	other metabolic processes	P	Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA)
ruditapes2_c1634	ATP synthesis coupled electron transport	other metabolic processes	P	Na(+)/H(+) antiporter subunit A1 (Mnh complex subunit A1)
ruditapes2_c1634	sodium ion transport	transport	P	Na(+)/H(+) antiporter subunit A1 (Mnh complex subunit A1)
ruditapes2_c1634	transport	transport	P	Na(+)/H(+) antiporter subunit A1 (Mnh complex subunit A1)
ruditapes2_c1634	cellular monovalent inorganic cation homeostasis	other biological processes	P	Na(+)/H(+) antiporter subunit A1 (Mnh complex subunit A1)
ruditapes2_c1634	oxidation reduction	other metabolic processes	P	Na(+)/H(+) antiporter subunit A1 (Mnh complex subunit A1)
ruditapes2_c1634	ion transport	transport	P	Na(+)/H(+) antiporter subunit A1 (Mnh complex subunit A1)
ruditapes2_c1634	proton transport	transport	P	Na(+)/H(+) antiporter subunit A1 (Mnh complex subunit A1)
ruditapes_c24989	tricarboxylic acid cycle	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c24989	glycolysis	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c24989	metabolic process	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c24989	oxidation reduction	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c25379	ATP catabolic process	other metabolic processes	P	Putative hemin import ATP-binding protein HrtA (EC 3.6.3.-)
ruditapes_c25379	transport	transport	P	Putative hemin import ATP-binding protein HrtA (EC 3.6.3.-)
ruditapes_c691	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-1
ruditapes_c685	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-1
ruditapes_c12265	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-1
ruditapes_c7645	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-1
ruditapes_c4243	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-1
ruditapes_c16552	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Cvsi-1
ruditapes_c4145	methylation	other metabolic processes	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c8858	methylation	other metabolic processes	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c8858	rRNA processing	RNA metabolism	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c8858	RNA methylation	RNA metabolism	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c4145	rRNA processing	RNA metabolism	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c4145	RNA methylation	RNA metabolism	P	Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c21045	sodium ion transport	transport	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes_c21045	transport	transport	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes_c21045	ion transport	transport	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes_c21045	regulation of pH	other biological processes	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes2_c87	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c87	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c87	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c87	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c32009	glutamine metabolic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisH (EC 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH)
ruditapes_c32009	histidine biosynthetic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisH (EC 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH)
ruditapes_c32009	cellular amino acid biosynthetic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisH (EC 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH)
ruditapes_lrc35368	translation	protein metabolism	P	50S ribosomal protein L21
ruditapes_c11879	phosphorylation	other metabolic processes	P	"Selenide, water dikinase (EC 2.7.9.3) (Selenium donor protein) (Selenophosphate synthase)"
ruditapes_c22106	cellular amino acid biosynthetic process	other metabolic processes	P	3-dehydroquinate synthase (EC 4.2.3.4)
ruditapes_c22106	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-dehydroquinate synthase (EC 4.2.3.4)
ruditapes_c15414	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-dehydroquinate synthase (EC 4.2.3.4)
ruditapes_c15414	cellular amino acid biosynthetic process	other metabolic processes	P	3-dehydroquinate synthase (EC 4.2.3.4)
ruditapes_c8704	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (Acyl-PO4 G3P acyltransferase) (Acyl-phosphate--glycerol-3-phosphate acyltransferase) (G3P acyltransferase) (GPAT) (EC 2.3.1.n3) (Lysophosphatidic acid synthase) (LPA synthase)
ruditapes_c18363	metabolic process	other metabolic processes	P	Bifunctional protein HldE [Includes: D-beta-D-heptose 7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose 7-phosphotransferase); D-beta-D-heptose 1-phosphate adenosyltransferase (EC 2.7.7.-)]
ruditapes_c18363	biosynthetic process	other metabolic processes	P	Bifunctional protein HldE [Includes: D-beta-D-heptose 7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose 7-phosphotransferase); D-beta-D-heptose 1-phosphate adenosyltransferase (EC 2.7.7.-)]
ruditapes_c18363	phosphorylation	other metabolic processes	P	Bifunctional protein HldE [Includes: D-beta-D-heptose 7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose 7-phosphotransferase); D-beta-D-heptose 1-phosphate adenosyltransferase (EC 2.7.7.-)]
ruditapes_c18363	carbohydrate metabolic process	other metabolic processes	P	Bifunctional protein HldE [Includes: D-beta-D-heptose 7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose 7-phosphotransferase); D-beta-D-heptose 1-phosphate adenosyltransferase (EC 2.7.7.-)]
ruditapes2_c2900	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c18140	ATP catabolic process	other metabolic processes	P	Phosphonates import ATP-binding protein PhnC (EC 3.6.3.28)
ruditapes_c18140	transport	transport	P	Phosphonates import ATP-binding protein PhnC (EC 3.6.3.28)
ruditapes_c18140	phosphonate transport	transport	P	Phosphonates import ATP-binding protein PhnC (EC 3.6.3.28)
ruditapes2_c1825	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_lrc15955	protein folding	protein metabolism	P	ATP-dependent Clp protease ATP-binding subunit ClpX
ruditapes_c2383	protein modification process	protein metabolism	P	Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (L-isoaspartyl protein carboxyl methyltransferase) (Protein L-isoaspartyl methyltransferase) (Protein-beta-aspartate methyltransferase) (PIMT)
ruditapes_c2383	methylation	other metabolic processes	P	Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (L-isoaspartyl protein carboxyl methyltransferase) (Protein L-isoaspartyl methyltransferase) (Protein-beta-aspartate methyltransferase) (PIMT)
ruditapes_c24330	response to stress	stress response	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c23310	response to stress	stress response	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c24330	protein folding	protein metabolism	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c23310	protein folding	protein metabolism	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c29770	riboflavin biosynthetic process	other metabolic processes	P	"3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (EC 4.1.99.12)"
ruditapes_c19588	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c19588	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c19588	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c19588	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c19588	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c19588	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c17774	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_c24620	glycine catabolic process	other metabolic processes	P	Glycine cleavage system H protein
ruditapes_c24620	glycine decarboxylation via glycine cleavage system	other metabolic processes	P	Glycine cleavage system H protein
ruditapes_c21194	oxidation reduction	other metabolic processes	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c21194	electron transport chain	other metabolic processes	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c21194	photosynthetic electron transport in photosystem II	other metabolic processes	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c21194	photosynthesis	other metabolic processes	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c21194	"photosynthesis, light reaction"	other metabolic processes	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c21194	transport	transport	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes_c21194	response to herbicide	stress response	P	Photosystem Q(B) protein (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II protein D1)
ruditapes2_lrc4143	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_lrc4143	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_lrc4143	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_lrc4143	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_lrc4143	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_lrc4143	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_lrc4143	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_lrc4143	metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c13733	nitrogen compound metabolic process	other metabolic processes	P	Urease subunit alpha (EC 3.5.1.5) (Urea amidohydrolase subunit alpha)
ruditapes_c13733	urea metabolic process	other metabolic processes	P	Urease subunit alpha (EC 3.5.1.5) (Urea amidohydrolase subunit alpha)
ruditapes_s35498	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_s35498	DNA repair	stress response	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_s35498	DNA repair	DNA metabolism	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_s35498	response to DNA damage stimulus	stress response	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_s35498	DNA recombination	DNA metabolism	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_s36358	protein folding	protein metabolism	P	33 kDa chaperonin (Heat shock protein 33 homolog) (HSP33)
ruditapes_c21017	ubiquinone biosynthetic process	other metabolic processes	P	Probable chorismate--pyruvate lyase (CL) (CPL) (EC 4.1.3.40)
ruditapes_c30705	oxidation reduction	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c30705	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c30705	carbohydrate metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c30705	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c30705	glycerol-3-phosphate catabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c12460	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes_c12460	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes_c12460	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes_c12460	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes_c29720	reductive pentose-phosphate cycle	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain 2 (RuBisCO large subunit 2) (EC 4.1.1.39)
ruditapes_c29720	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain 2 (RuBisCO large subunit 2) (EC 4.1.1.39)
ruditapes_c29720	oxidation reduction	other metabolic processes	P	Ribulose bisphosphate carboxylase large chain 2 (RuBisCO large subunit 2) (EC 4.1.1.39)
ruditapes_c10749	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c10749	metabolic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c13007	cell cycle	cell cycle and proliferation	P	Probable GTP-binding protein EngB
ruditapes_c13007	barrier septum formation	cell organization and biogenesis	P	Probable GTP-binding protein EngB
ruditapes_c13007	cell division	other biological processes	P	Probable GTP-binding protein EngB
ruditapes_c12928	tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c12928	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c12928	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c12928	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c12928	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c12928	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c14760	carbohydrate metabolic process	other metabolic processes	P	Xylose isomerase (EC 5.3.1.5)
ruditapes_c14760	D-xylose metabolic process	other metabolic processes	P	Xylose isomerase (EC 5.3.1.5)
ruditapes_c14760	pentose-phosphate shunt	other metabolic processes	P	Xylose isomerase (EC 5.3.1.5)
ruditapes_lrc33848	oxidation reduction	other metabolic processes	P	Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) (Flavorubredoxin reductase) (FlRd-reductase) (FlavoRb reductase)
ruditapes_c24691	oxidation reduction	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5) (Fragment)"
ruditapes_c24691	transport	transport	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5) (Fragment)"
ruditapes_c24691	ATP synthesis coupled electron transport	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5) (Fragment)"
ruditapes_c26092	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_c26092	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_c14714	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c14714	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c5166	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	Primosomal replication protein n
ruditapes_c5166	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	Primosomal replication protein n
ruditapes_c5166	DNA replication	DNA metabolism	P	Primosomal replication protein n
ruditapes_c12011	metabolic process	other metabolic processes	P	Arylsulfatase H (ASH) (EC 3.1.6.-)
ruditapes_c20883	metabolic process	other metabolic processes	P	Arylsulfatase I (ASI) (EC 3.1.6.-)
ruditapes_c6265	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Tetraspanin-6 (Tspan-6)
ruditapes_c6265	signal transduction	signal transduction	P	Tetraspanin-6 (Tspan-6)
ruditapes_c28685	negative regulation of protein ubiquitination	protein metabolism	P	UBX domain-containing protein 1 (SAPK substrate protein 1)
ruditapes_c28685	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	UBX domain-containing protein 1 (SAPK substrate protein 1)
ruditapes_c2902	DNA repair	stress response	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes_c2902	DNA repair	DNA metabolism	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes_c2902	DNA recombination	DNA metabolism	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes_c2902	response to DNA damage stimulus	stress response	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes2_c756	DNA repair	stress response	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes2_c756	DNA repair	DNA metabolism	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes2_c756	response to DNA damage stimulus	stress response	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes2_c756	DNA recombination	DNA metabolism	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes_c12294	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1)
ruditapes_c3203	transport	transport	P	"Glutaredoxin-2, mitochondrial"
ruditapes2_c1386	electron transport chain	other metabolic processes	P	"Glutaredoxin-2, mitochondrial"
ruditapes2_c1386	cell redox homeostasis	other biological processes	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c1056	electron transport chain	other metabolic processes	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c14684	cell redox homeostasis	other biological processes	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c1056	cell redox homeostasis	other biological processes	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c1119	transport	transport	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c1056	transport	transport	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c3203	electron transport chain	other metabolic processes	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c3203	cell redox homeostasis	other biological processes	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c1119	cell redox homeostasis	other biological processes	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c1119	electron transport chain	other metabolic processes	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c14684	electron transport chain	other metabolic processes	P	"Glutaredoxin-2, mitochondrial"
ruditapes2_c1386	transport	transport	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c14684	transport	transport	P	"Glutaredoxin-2, mitochondrial"
ruditapes_c16408	signal transduction	signal transduction	P	Tumor necrosis factor receptor type 1-associated DEATH domain protein (TNFR1-associated DEATH domain protein) (TNFRSF1A-associated via death domain)
ruditapes_c16408	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Tumor necrosis factor receptor type 1-associated DEATH domain protein (TNFR1-associated DEATH domain protein) (TNFRSF1A-associated via death domain)
ruditapes_c16408	induction of apoptosis	death	P	Tumor necrosis factor receptor type 1-associated DEATH domain protein (TNFR1-associated DEATH domain protein) (TNFRSF1A-associated via death domain)
ruditapes_c16408	apoptosis	death	P	Tumor necrosis factor receptor type 1-associated DEATH domain protein (TNFR1-associated DEATH domain protein) (TNFRSF1A-associated via death domain)
ruditapes_c18996	negative regulation of Schwann cell proliferation	cell cycle and proliferation	P	RING finger protein 10
ruditapes_c18996	negative regulation of Schwann cell proliferation	developmental processes	P	RING finger protein 10
ruditapes_c18996	positive regulation of myelination	developmental processes	P	RING finger protein 10
ruditapes_c18996	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RING finger protein 10
ruditapes_c18996	"transcription, DNA-dependent"	RNA metabolism	P	RING finger protein 10
ruditapes_c18996	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	RING finger protein 10
ruditapes_c305	transport	transport	P	"Dynein light chain roadblock-type 2 (Dynein light chain 2B, cytoplasmic)"
ruditapes2_c1013	transport	transport	P	"Dynein light chain roadblock-type 2 (Dynein light chain 2B, cytoplasmic)"
ruditapes_lrc13723	transport	transport	P	"Dynein light chain roadblock-type 2 (Dynein light chain 2B, cytoplasmic)"
ruditapes2_c261	translation	protein metabolism	P	"39S ribosomal protein L27, mitochondrial (L27mt) (MRP-L27)"
ruditapes_c14954	"transcription, DNA-dependent"	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC2 (RNA polymerases I, II, and III subunit ABC2) (DNA-directed RNA polymerase II subunit F) (RPB6 homolog)"
ruditapes_c14954	protein amino acid phosphorylation	protein metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC2 (RNA polymerases I, II, and III subunit ABC2) (DNA-directed RNA polymerase II subunit F) (RPB6 homolog)"
ruditapes_c14954	transcription from RNA polymerase II promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC2 (RNA polymerases I, II, and III subunit ABC2) (DNA-directed RNA polymerase II subunit F) (RPB6 homolog)"
ruditapes_c28901	chromosome segregation	other biological processes	P	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform (Medium tumor antigen-associated 61 kDa protein) (PP2A subunit A isoform PR65-alpha) (PP2A subunit A isoform R1-alpha)
ruditapes_c13775	translation	protein metabolism	P	"39S ribosomal protein L4, mitochondrial (L4mt) (MRP-L4)"
ruditapes_c953	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 2 (TBP-associated factor 150 kDa) (Transcription initiation factor TFIID 150 kDa subunit) (TAF(II)150) (TAFII-150) (TAFII150)
ruditapes_c953	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 2 (TBP-associated factor 150 kDa) (Transcription initiation factor TFIID 150 kDa subunit) (TAF(II)150) (TAFII-150) (TAFII150)
ruditapes_c7004	RNA methylation	RNA metabolism	P	Small RNA 2'-O-methyltransferase (EC 2.1.1.n8) (HEN1 methyltransferase homolog 1)
ruditapes_c7004	gene silencing by RNA	other metabolic processes	P	Small RNA 2'-O-methyltransferase (EC 2.1.1.n8) (HEN1 methyltransferase homolog 1)
ruditapes_c7004	piRNA metabolic process	RNA metabolism	P	Small RNA 2'-O-methyltransferase (EC 2.1.1.n8) (HEN1 methyltransferase homolog 1)
ruditapes_c7004	methylation	other metabolic processes	P	Small RNA 2'-O-methyltransferase (EC 2.1.1.n8) (HEN1 methyltransferase homolog 1)
ruditapes_c22708	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_c23207	transport	transport	P	"NAD(P)H-quinone oxidoreductase subunit J, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit J) (NADH-plastoquinone oxidoreductase subunit J)"
ruditapes_c23207	oxidation reduction	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit J, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit J) (NADH-plastoquinone oxidoreductase subunit J)"
ruditapes_c21504	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit alpha (PEP) (EC 2.7.7.6) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha)
ruditapes_c22710	oxidation reduction	other metabolic processes	P	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein (DPOR subunit L) (LI-POR subunit L) (EC 1.18.-.-)
ruditapes_c22710	chlorophyll biosynthetic process	other metabolic processes	P	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein (DPOR subunit L) (LI-POR subunit L) (EC 1.18.-.-)
ruditapes_c22710	pigment biosynthetic process	other metabolic processes	P	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein (DPOR subunit L) (LI-POR subunit L) (EC 1.18.-.-)
ruditapes_c22710	"photosynthesis, dark reaction"	other metabolic processes	P	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein (DPOR subunit L) (LI-POR subunit L) (EC 1.18.-.-)
ruditapes_c22710	photosynthesis	other metabolic processes	P	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein (DPOR subunit L) (LI-POR subunit L) (EC 1.18.-.-)
ruditapes_c26492	defense response to bacterium	stress response	P	"Beta-defensin 20 (BD-20) (Defensin, beta 20)"
ruditapes_c26492	defense response	stress response	P	"Beta-defensin 20 (BD-20) (Defensin, beta 20)"
ruditapes_c30635	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
ruditapes_c30635	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
ruditapes_c30635	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
ruditapes_c30635	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
ruditapes_c30635	transport	transport	P	NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
ruditapes2_c3336	transport	transport	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c3336	aerobic respiration	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c3336	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_c3336	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes2_lrc4145	oxidation reduction	other metabolic processes	P	Inactive tetrahydrocannabinolic acid synthase
ruditapes_c10889	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c10889	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c10889	transport	transport	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c10889	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes2_c587	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
ruditapes2_c587	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
ruditapes2_c587	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
ruditapes2_c587	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
ruditapes2_c587	transport	transport	P	NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2)
ruditapes_c6314	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c6314	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c6314	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c9514	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 (EC 1.6.5.3) (EC 1.6.99.3) (NADH dehydrogenase subunit 7)
ruditapes_c9514	oxidation reduction	other metabolic processes	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 (EC 1.6.5.3) (EC 1.6.99.3) (NADH dehydrogenase subunit 7)
ruditapes_c9514	transport	transport	P	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 (EC 1.6.5.3) (EC 1.6.99.3) (NADH dehydrogenase subunit 7)
ruditapes_c28387	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c28387	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c28387	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c28387	transport	transport	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c24043	ion transport	transport	P	"Calcium-transporting ATPase 1, chloroplastic (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1)"
ruditapes_c24043	calcium ion transport	transport	P	"Calcium-transporting ATPase 1, chloroplastic (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1)"
ruditapes_c24043	transmembrane calcium ion transport	transport	P	"Calcium-transporting ATPase 1, chloroplastic (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1)"
ruditapes_c24043	ATP biosynthetic process	other metabolic processes	P	"Calcium-transporting ATPase 1, chloroplastic (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1)"
ruditapes_c24043	metabolic process	other metabolic processes	P	"Calcium-transporting ATPase 1, chloroplastic (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1)"
ruditapes_c24043	transport	transport	P	"Calcium-transporting ATPase 1, chloroplastic (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1)"
ruditapes_c24043	cation transport	transport	P	"Calcium-transporting ATPase 1, chloroplastic (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1)"
ruditapes_c14555	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c1385	respiratory electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c14555	transport	transport	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c14555	respiratory electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c1385	transport	transport	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c1385	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c14555	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c1385	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c10561	protein folding	protein metabolism	P	"10 kDa chaperonin, cyanelle (Protein Cpn10) (groES protein)"
ruditapes_c12282	peptidyl-histidine phosphorylation	protein metabolism	P	Ethylene response sensor 1 (AtERS1) (EC 2.7.11.-) (EC 2.7.13.3) (Protein ERS1)
ruditapes_c12282	signal transduction	signal transduction	P	Ethylene response sensor 1 (AtERS1) (EC 2.7.11.-) (EC 2.7.13.3) (Protein ERS1)
ruditapes_c12282	ethylene mediated signaling pathway	signal transduction	P	Ethylene response sensor 1 (AtERS1) (EC 2.7.11.-) (EC 2.7.13.3) (Protein ERS1)
ruditapes_c12282	two-component signal transduction system (phosphorelay)	signal transduction	P	Ethylene response sensor 1 (AtERS1) (EC 2.7.11.-) (EC 2.7.13.3) (Protein ERS1)
ruditapes_c12282	phosphorylation	other metabolic processes	P	Ethylene response sensor 1 (AtERS1) (EC 2.7.11.-) (EC 2.7.13.3) (Protein ERS1)
ruditapes_c12282	negative regulation of ethylene mediated signaling pathway	signal transduction	P	Ethylene response sensor 1 (AtERS1) (EC 2.7.11.-) (EC 2.7.13.3) (Protein ERS1)
ruditapes_lrc31512	aging	other biological processes	P	"Rhodanese-like domain-containing protein 15, chloroplastic (Protein DARK INDUCIBLE 1) (Senescence-associated protein 1) (AtSEN1) (Sulfurtransferase 15) (AtStr15)"
ruditapes_lrc31512	response to wounding	stress response	P	"Rhodanese-like domain-containing protein 15, chloroplastic (Protein DARK INDUCIBLE 1) (Senescence-associated protein 1) (AtSEN1) (Sulfurtransferase 15) (AtStr15)"
ruditapes_lrc31512	response to oxidative stress	stress response	P	"Rhodanese-like domain-containing protein 15, chloroplastic (Protein DARK INDUCIBLE 1) (Senescence-associated protein 1) (AtSEN1) (Sulfurtransferase 15) (AtStr15)"
ruditapes_lrc31512	response to jasmonic acid stimulus	other biological processes	P	"Rhodanese-like domain-containing protein 15, chloroplastic (Protein DARK INDUCIBLE 1) (Senescence-associated protein 1) (AtSEN1) (Sulfurtransferase 15) (AtStr15)"
ruditapes2_lrc5535	signal transduction	signal transduction	P	Calcium-dependent protein kinase 9 (EC 2.7.11.1) (Calmodulin-domain protein kinase CDPK isoform 9)
ruditapes2_lrc5535	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 9 (EC 2.7.11.1) (Calmodulin-domain protein kinase CDPK isoform 9)
ruditapes_lrc34135	signal transduction	signal transduction	P	Calcium-dependent protein kinase 9 (EC 2.7.11.1) (Calmodulin-domain protein kinase CDPK isoform 9)
ruditapes2_lrc5535	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 9 (EC 2.7.11.1) (Calmodulin-domain protein kinase CDPK isoform 9)
ruditapes_lrc34135	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 9 (EC 2.7.11.1) (Calmodulin-domain protein kinase CDPK isoform 9)
ruditapes_lrc34135	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 9 (EC 2.7.11.1) (Calmodulin-domain protein kinase CDPK isoform 9)
ruditapes_lrc33574	response to cadmium ion	other biological processes	P	Eukaryotic translation initiation factor 3 subunit I (eIF3i) (Eukaryotic translation initiation factor 3 subunit 2) (TGF-beta receptor-interacting protein 1) (TRIP-1) (eIF-3-beta) (eIF3 p36)
ruditapes_lrc33574	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit I (eIF3i) (Eukaryotic translation initiation factor 3 subunit 2) (TGF-beta receptor-interacting protein 1) (TRIP-1) (eIF-3-beta) (eIF3 p36)
ruditapes_lrc33574	response to salt stress	stress response	P	Eukaryotic translation initiation factor 3 subunit I (eIF3i) (Eukaryotic translation initiation factor 3 subunit 2) (TGF-beta receptor-interacting protein 1) (TRIP-1) (eIF-3-beta) (eIF3 p36)
ruditapes_lrc33574	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit I (eIF3i) (Eukaryotic translation initiation factor 3 subunit 2) (TGF-beta receptor-interacting protein 1) (TRIP-1) (eIF-3-beta) (eIF3 p36)
ruditapes_c3678	hormone-mediated signaling	signal transduction	P	Transcriptional regulator SUPERMAN
ruditapes_c3678	multicellular organismal development	developmental processes	P	Transcriptional regulator SUPERMAN
ruditapes_c3678	flower development	developmental processes	P	Transcriptional regulator SUPERMAN
ruditapes_c3678	regulation of cell proliferation	cell cycle and proliferation	P	Transcriptional regulator SUPERMAN
ruditapes_c3678	cell differentiation	other biological processes	P	Transcriptional regulator SUPERMAN
ruditapes_c3678	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulator SUPERMAN
ruditapes_c3678	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulator SUPERMAN
ruditapes_c3678	specification of floral organ identity	developmental processes	P	Transcriptional regulator SUPERMAN
ruditapes_c3678	regulation of cell size	other biological processes	P	Transcriptional regulator SUPERMAN
ruditapes_c3678	formation of organ boundary	developmental processes	P	Transcriptional regulator SUPERMAN
ruditapes2_lrc4787	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase CYP19-1 (PPIase CYP19-1) (EC 5.2.1.8) (Cyclophilin of 19 kDa 1) (Rotamase cyclophilin-3)
ruditapes2_lrc4787	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase CYP19-1 (PPIase CYP19-1) (EC 5.2.1.8) (Cyclophilin of 19 kDa 1) (Rotamase cyclophilin-3)
ruditapes_c905	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase FKBP62 (PPIase FKBP62) (EC 5.2.1.8) (70 kDa peptidyl-prolyl isomerase) (FK506-binding protein 62) (AtFKBP62) (Immunophilin FKBP62) (Peptidylprolyl isomerase ROF1) (Protein ROTAMASE FKBP 1) (Rotamase)
ruditapes_c905	response to wounding	stress response	P	Peptidyl-prolyl cis-trans isomerase FKBP62 (PPIase FKBP62) (EC 5.2.1.8) (70 kDa peptidyl-prolyl isomerase) (FK506-binding protein 62) (AtFKBP62) (Immunophilin FKBP62) (Peptidylprolyl isomerase ROF1) (Protein ROTAMASE FKBP 1) (Rotamase)
ruditapes_c905	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase FKBP62 (PPIase FKBP62) (EC 5.2.1.8) (70 kDa peptidyl-prolyl isomerase) (FK506-binding protein 62) (AtFKBP62) (Immunophilin FKBP62) (Peptidylprolyl isomerase ROF1) (Protein ROTAMASE FKBP 1) (Rotamase)
ruditapes_c905	response to cadmium ion	other biological processes	P	Peptidyl-prolyl cis-trans isomerase FKBP62 (PPIase FKBP62) (EC 5.2.1.8) (70 kDa peptidyl-prolyl isomerase) (FK506-binding protein 62) (AtFKBP62) (Immunophilin FKBP62) (Peptidylprolyl isomerase ROF1) (Protein ROTAMASE FKBP 1) (Rotamase)
ruditapes_c905	response to heat	stress response	P	Peptidyl-prolyl cis-trans isomerase FKBP62 (PPIase FKBP62) (EC 5.2.1.8) (70 kDa peptidyl-prolyl isomerase) (FK506-binding protein 62) (AtFKBP62) (Immunophilin FKBP62) (Peptidylprolyl isomerase ROF1) (Protein ROTAMASE FKBP 1) (Rotamase)
ruditapes_c21278	oxidation reduction	other metabolic processes	P	Steroid 5-alpha-reductase DET2 (AtDET2) (EC 1.3.1.22) (Protein COMPACT ROSETTE 1) (Protein DEETIOLATED 2)
ruditapes_c21278	brassinosteroid biosynthetic process	other metabolic processes	P	Steroid 5-alpha-reductase DET2 (AtDET2) (EC 1.3.1.22) (Protein COMPACT ROSETTE 1) (Protein DEETIOLATED 2)
ruditapes_c21278	lipid metabolic process	other metabolic processes	P	Steroid 5-alpha-reductase DET2 (AtDET2) (EC 1.3.1.22) (Protein COMPACT ROSETTE 1) (Protein DEETIOLATED 2)
ruditapes_c21278	steroid metabolic process	other metabolic processes	P	Steroid 5-alpha-reductase DET2 (AtDET2) (EC 1.3.1.22) (Protein COMPACT ROSETTE 1) (Protein DEETIOLATED 2)
ruditapes_c21278	brassinosteroid homeostasis	other biological processes	P	Steroid 5-alpha-reductase DET2 (AtDET2) (EC 1.3.1.22) (Protein COMPACT ROSETTE 1) (Protein DEETIOLATED 2)
ruditapes_c21278	steroid biosynthetic process	other metabolic processes	P	Steroid 5-alpha-reductase DET2 (AtDET2) (EC 1.3.1.22) (Protein COMPACT ROSETTE 1) (Protein DEETIOLATED 2)
ruditapes_c21278	lipid biosynthetic process	other metabolic processes	P	Steroid 5-alpha-reductase DET2 (AtDET2) (EC 1.3.1.22) (Protein COMPACT ROSETTE 1) (Protein DEETIOLATED 2)
ruditapes_c25703	mRNA capping	RNA metabolism	P	Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 (EC 2.1.1.57) (Cap1 2'O-ribose methyltransferase 1) (MTr1) (TbMTr1)
ruditapes_c25703	methylation	other metabolic processes	P	Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 (EC 2.1.1.57) (Cap1 2'O-ribose methyltransferase 1) (MTr1) (TbMTr1)
ruditapes_c25703	mRNA processing	RNA metabolism	P	Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 (EC 2.1.1.57) (Cap1 2'O-ribose methyltransferase 1) (MTr1) (TbMTr1)
ruditapes_c25703	mRNA methylation	RNA metabolism	P	Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 (EC 2.1.1.57) (Cap1 2'O-ribose methyltransferase 1) (MTr1) (TbMTr1)
ruditapes_c26309	ion transport	transport	P	"Glutamate receptor 1 (GluR-1) (AMPA-selective glutamate receptor 1) (GluR-A) (GluR-K1) (Glutamate receptor ionotropic, AMPA 1) (GluA1)"
ruditapes_c26309	ionotropic glutamate receptor signaling pathway	signal transduction	P	"Glutamate receptor 1 (GluR-1) (AMPA-selective glutamate receptor 1) (GluR-A) (GluR-K1) (Glutamate receptor ionotropic, AMPA 1) (GluA1)"
ruditapes_c26309	transport	transport	P	"Glutamate receptor 1 (GluR-1) (AMPA-selective glutamate receptor 1) (GluR-A) (GluR-K1) (Glutamate receptor ionotropic, AMPA 1) (GluA1)"
ruditapes_c7838	gluconeogenesis	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes_c7838	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 3 (FBPase class 3) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3)"
ruditapes_c11839	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c11839	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c11839	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c15950	purine ribonucleoside salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c15950	nucleoside metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c15950	purine salvage	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c15950	xanthine metabolic process	other metabolic processes	P	Xanthine phosphoribosyltransferase (XPRTase) (EC 2.4.2.22)
ruditapes_c16612	DNA replication	DNA metabolism	P	DNA polymerase III PolC-type (PolIII) (EC 2.7.7.7)
ruditapes_c19227	thiamin biosynthetic process	other metabolic processes	P	Probable tRNA sulfurtransferase (EC 2.8.1.4) (Sulfur carrier protein ThiS sulfurtransferase) (Thiamine biosynthesis protein ThiI) (tRNA 4-thiouridine synthase)
ruditapes_c18795	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c18795	metabolic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c8725	carbohydrate metabolic process	other metabolic processes	P	D-ribose pyranase (EC 5.5.1.n1)
ruditapes_c8725	monosaccharide metabolic process	other metabolic processes	P	D-ribose pyranase (EC 5.5.1.n1)
ruditapes_c28542	response to salt stress	stress response	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	defense response to bacterium	stress response	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	response to abscisic acid stimulus	other biological processes	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	"induced systemic resistance, jasmonic acid mediated signaling pathway"	stress response	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	response to oxidative stress	stress response	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	plant-type hypersensitive response	death	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	priming of cellular response to stress	stress response	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	defense response	stress response	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	"induced systemic resistance, jasmonic acid mediated signaling pathway"	signal transduction	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	response to cold	stress response	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	response to reactive oxygen species	stress response	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	response to UV-B	other biological processes	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	response to hydrogen peroxide	stress response	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	response to osmotic stress	stress response	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	plant-type hypersensitive response	stress response	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	ovule development	developmental processes	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	camalexin biosynthetic process	other metabolic processes	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	cell division	other biological processes	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	response to ethylene stimulus	other biological processes	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c28542	root development	developmental processes	P	Mitogen-activated protein kinase 6 (AtMPK6) (MAP kinase 6) (EC 2.7.11.24)
ruditapes_c1506	recognition of pollen	other biological processes	P	Receptor-like serine/threonine-protein kinase SD1-7 (EC 2.7.11.1) (Arabidopsis thaliana receptor kinase 1) (S-domain-1 (SD1) receptor kinase 7) (SD1-7)
ruditapes_c1506	abscisic acid mediated signaling	signal transduction	P	Receptor-like serine/threonine-protein kinase SD1-7 (EC 2.7.11.1) (Arabidopsis thaliana receptor kinase 1) (S-domain-1 (SD1) receptor kinase 7) (SD1-7)
ruditapes_c1506	phosphorylation	other metabolic processes	P	Receptor-like serine/threonine-protein kinase SD1-7 (EC 2.7.11.1) (Arabidopsis thaliana receptor kinase 1) (S-domain-1 (SD1) receptor kinase 7) (SD1-7)
ruditapes_c1506	protein amino acid phosphorylation	protein metabolism	P	Receptor-like serine/threonine-protein kinase SD1-7 (EC 2.7.11.1) (Arabidopsis thaliana receptor kinase 1) (S-domain-1 (SD1) receptor kinase 7) (SD1-7)
ruditapes2_c618	gibberellin biosynthetic process	other metabolic processes	P	Gibberellin 20 oxidase 3 (EC 1.14.11.-) (GA 20-oxidase 3) (Gibberellin C-20 oxidase 3)
ruditapes2_c618	oxidation reduction	other metabolic processes	P	Gibberellin 20 oxidase 3 (EC 1.14.11.-) (GA 20-oxidase 3) (Gibberellin C-20 oxidase 3)
ruditapes2_c618	antibiotic biosynthetic process	other metabolic processes	P	Gibberellin 20 oxidase 3 (EC 1.14.11.-) (GA 20-oxidase 3) (Gibberellin C-20 oxidase 3)
ruditapes_lrc18057	recognition of pollen	other biological processes	P	G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 (EC 2.7.11.1) (Receptor-like kinase 4) (S-domain-2 (SD2) receptor kinase 2) (SD2-2)
ruditapes_lrc18057	protein amino acid phosphorylation	protein metabolism	P	G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 (EC 2.7.11.1) (Receptor-like kinase 4) (S-domain-2 (SD2) receptor kinase 2) (SD2-2)
ruditapes_lrc18057	phosphorylation	other metabolic processes	P	G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 (EC 2.7.11.1) (Receptor-like kinase 4) (S-domain-2 (SD2) receptor kinase 2) (SD2-2)
ruditapes_c18212	intracellular protein transport	transport	P	Ras-related protein RABA1b (AtRABA1b) (Ras-related protein Rab11) (AtRab11)
ruditapes_c18212	protein transport	transport	P	Ras-related protein RABA1b (AtRABA1b) (Ras-related protein Rab11) (AtRab11)
ruditapes_c18212	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein RABA1b (AtRABA1b) (Ras-related protein Rab11) (AtRab11)
ruditapes_c18212	transport	transport	P	Ras-related protein RABA1b (AtRABA1b) (Ras-related protein Rab11) (AtRab11)
ruditapes_c18226	organ senescence	other biological processes	P	Protein SRG1 (AtSRG1) (Protein SENESCENCE-RELATED GENE 1)
ruditapes_c18226	oxidation reduction	other metabolic processes	P	Protein SRG1 (AtSRG1) (Protein SENESCENCE-RELATED GENE 1)
ruditapes_c26385	transmembrane transport	transport	P	Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) antiporter CAX2) (Ca(2+)/H(+) exchanger 2) (Protein CATION EXCHANGER 2)
ruditapes_c26385	cadmium ion transport	transport	P	Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) antiporter CAX2) (Ca(2+)/H(+) exchanger 2) (Protein CATION EXCHANGER 2)
ruditapes_c26385	manganese ion transport	transport	P	Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) antiporter CAX2) (Ca(2+)/H(+) exchanger 2) (Protein CATION EXCHANGER 2)
ruditapes_c26385	calcium ion transport	transport	P	Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) antiporter CAX2) (Ca(2+)/H(+) exchanger 2) (Protein CATION EXCHANGER 2)
ruditapes_c26385	transport	transport	P	Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) antiporter CAX2) (Ca(2+)/H(+) exchanger 2) (Protein CATION EXCHANGER 2)
ruditapes_c26385	cation transport	transport	P	Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) antiporter CAX2) (Ca(2+)/H(+) exchanger 2) (Protein CATION EXCHANGER 2)
ruditapes_c26385	ion transport	transport	P	Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) antiporter CAX2) (Ca(2+)/H(+) exchanger 2) (Protein CATION EXCHANGER 2)
ruditapes_c28909	microtubule-based movement	other biological processes	P	"Dynein gamma chain, flagellar outer arm"
ruditapes_c28909	cell projection organization	cell organization and biogenesis	P	"Dynein gamma chain, flagellar outer arm"
ruditapes_c28909	ATP catabolic process	other metabolic processes	P	"Dynein gamma chain, flagellar outer arm"
ruditapes_lrc32168	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc33986	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc32168	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_lrc33986	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_c3371	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_c3371	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin) (Cyclosporin A-binding protein) (Rotamase)
ruditapes_c25536	response to antibiotic	other biological processes	P	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)
ruditapes_c25536	ATP catabolic process	other metabolic processes	P	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)
ruditapes_c25536	transport	transport	P	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)
ruditapes_c9167	glyoxylate cycle	other metabolic processes	P	Isocitrate dehydrogenase kinase/phosphatase (IDH kinase/phosphatase) (IDHK/P) (EC 2.7.11.5) (EC 3.1.3.-)
ruditapes_c9167	dephosphorylation	other metabolic processes	P	Isocitrate dehydrogenase kinase/phosphatase (IDH kinase/phosphatase) (IDHK/P) (EC 2.7.11.5) (EC 3.1.3.-)
ruditapes_c9167	phosphorylation	other metabolic processes	P	Isocitrate dehydrogenase kinase/phosphatase (IDH kinase/phosphatase) (IDHK/P) (EC 2.7.11.5) (EC 3.1.3.-)
ruditapes_c9167	glucose metabolic process	other metabolic processes	P	Isocitrate dehydrogenase kinase/phosphatase (IDH kinase/phosphatase) (IDHK/P) (EC 2.7.11.5) (EC 3.1.3.-)
ruditapes_c9167	tricarboxylic acid cycle	other metabolic processes	P	Isocitrate dehydrogenase kinase/phosphatase (IDH kinase/phosphatase) (IDHK/P) (EC 2.7.11.5) (EC 3.1.3.-)
ruditapes_c21699	pentose-phosphate shunt	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_c21699	carbohydrate metabolic process	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes2_c455	protein modification process	protein metabolism	P	Probable hydrogenase nickel incorporation protein HypA
ruditapes_c1235	DNA recombination	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c1235	response to DNA damage stimulus	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c1235	DNA repair	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c1235	DNA repair	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c1235	regulation of ARF GTPase activity	signal transduction	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c10156	oxidation reduction	other metabolic processes	P	Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster protein) (HCP)
ruditapes_c9489	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c9489	phosphatidylethanolamine biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c7338	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase)
ruditapes2_c1301	metabolic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes2_c1301	lysine biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes2_c1301	cellular amino acid biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes2_c1301	diaminopimelate biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes2_c1301	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c19195	ion transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes_c19195	sodium ion transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes_c19195	transport	transport	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes_c19195	regulation of pH	other biological processes	P	Na(+)/H(+) antiporter NhaA 2 (Sodium/proton antiporter NhaA 2)
ruditapes_c26646	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c26646	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c26646	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c26646	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c26646	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c12658	transport	transport	P	Desulfoferrodoxin (Dfx) (EC 1.15.1.2) (Superoxide reductase) (SOR)
ruditapes_c12658	response to toxin	other biological processes	P	Desulfoferrodoxin (Dfx) (EC 1.15.1.2) (Superoxide reductase) (SOR)
ruditapes_c12658	electron transport chain	other metabolic processes	P	Desulfoferrodoxin (Dfx) (EC 1.15.1.2) (Superoxide reductase) (SOR)
ruditapes_c12658	oxidation reduction	other metabolic processes	P	Desulfoferrodoxin (Dfx) (EC 1.15.1.2) (Superoxide reductase) (SOR)
ruditapes_c12658	removal of superoxide radicals	other metabolic processes	P	Desulfoferrodoxin (Dfx) (EC 1.15.1.2) (Superoxide reductase) (SOR)
ruditapes_c17376	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c17376	oxidation reduction	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c17376	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c17376	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c9548	biotin biosynthetic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c9548	metabolic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c9548	biosynthetic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c2594	carbamoyl phosphate biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c2594	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c2594	cellular amino acid biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c2594	glutamine metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c2594	glutamine catabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c2594	arginine biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c16830	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)
ruditapes_c16830	'de novo' IMP biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)
ruditapes_c30474	lipid biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_c30474	lipid A biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_lrc26406	RNA modification	RNA metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_lrc26406	biopolymer modification	other metabolic processes	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_lrc26406	peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid	protein metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c11864	phosphate transport	transport	P	Phosphate import ATP-binding protein PstB (EC 3.6.3.27) (ABC phosphate transporter) (Phosphate-transporting ATPase)
ruditapes_c11864	transport	transport	P	Phosphate import ATP-binding protein PstB (EC 3.6.3.27) (ABC phosphate transporter) (Phosphate-transporting ATPase)
ruditapes_c11864	ATP catabolic process	other metabolic processes	P	Phosphate import ATP-binding protein PstB (EC 3.6.3.27) (ABC phosphate transporter) (Phosphate-transporting ATPase)
ruditapes_c28535	tryptophan biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c28535	cellular amino acid biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c28535	metabolic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c28535	aromatic amino acid family biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes2_c2746	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Redox-sensing transcriptional repressor rex
ruditapes2_c2746	response to redox state	other biological processes	P	Redox-sensing transcriptional repressor rex
ruditapes2_c2746	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Redox-sensing transcriptional repressor rex
ruditapes2_c2746	"transcription, DNA-dependent"	RNA metabolism	P	Redox-sensing transcriptional repressor rex
ruditapes_c16475	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c16475	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c16475	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c16475	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c16475	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_lrc26129	oxidation reduction	other metabolic processes	P	Phycocyanobilin:ferredoxin oxidoreductase (EC 1.3.7.5)
ruditapes_lrc26129	phytochromobilin biosynthetic process	other metabolic processes	P	Phycocyanobilin:ferredoxin oxidoreductase (EC 1.3.7.5)
ruditapes_s39839	translation	protein metabolism	P	30S ribosomal protein S15
ruditapes_lrc35006	translation	protein metabolism	P	30S ribosomal protein S15
ruditapes_lrc34554	translation	protein metabolism	P	30S ribosomal protein S15
ruditapes_c10626	oxidation reduction	other metabolic processes	P	Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone])
ruditapes_c10626	tricarboxylic acid cycle	other metabolic processes	P	Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone])
ruditapes_c16991	purine nucleotide metabolic process	other metabolic processes	P	Guanylate kinase (EC 2.7.4.8) (GMP kinase)
ruditapes_c16991	phosphorylation	other metabolic processes	P	Guanylate kinase (EC 2.7.4.8) (GMP kinase)
ruditapes_lrc19374	carbohydrate metabolic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc10891	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc19374	lipid glycosylation	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc10891	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc19374	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc10891	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc19374	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc19374	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc19374	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc10891	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc10891	cell division	other biological processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc19374	cell division	other biological processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc10891	lipid glycosylation	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc10891	carbohydrate metabolic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc19374	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_lrc10891	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c12688	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (Acyl-PO4 G3P acyltransferase) (Acyl-phosphate--glycerol-3-phosphate acyltransferase) (G3P acyltransferase) (GPAT) (EC 2.3.1.n3) (Lysophosphatidic acid synthase) (LPA synthase)
ruditapes_c27787	phosphatidylethanolamine biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c27787	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c21109	proteolysis	protein metabolism	P	Lipoprotein signal peptidase (EC 3.4.23.36) (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)
ruditapes_c28074	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c28074	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_s38985	porphyrin biosynthetic process	other metabolic processes	P	Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37)
ruditapes_c8632	porphyrin biosynthetic process	other metabolic processes	P	"Coproporphyrinogen-III oxidase, aerobic (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_c8632	oxidation reduction	other metabolic processes	P	"Coproporphyrinogen-III oxidase, aerobic (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)"
ruditapes_lrc13232	coenzyme A biosynthetic process	other metabolic processes	P	Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase)
ruditapes_lrc13232	phosphorylation	other metabolic processes	P	Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase)
ruditapes_c23917	translation	protein metabolism	P	50S ribosomal protein L19
ruditapes2_c1208	methylation	other metabolic processes	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes2_c1208	tRNA processing	RNA metabolism	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_c13527	lysine biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8)
ruditapes_c13527	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8)
ruditapes_c13527	oxidation reduction	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8)
ruditapes_c13527	cellular amino acid biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8)
ruditapes_c13527	diaminopimelate biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8)
ruditapes_c23091	biological_process	other biological processes	P	Protein LLP homolog (Protein LAPS18-like)
ruditapes_c16177	cell cycle	cell cycle and proliferation	P	Ras association domain-containing protein 2
ruditapes_c16177	signal transduction	signal transduction	P	Ras association domain-containing protein 2
ruditapes_c20998	mRNA processing	RNA metabolism	P	Protein SREK1IP1
ruditapes_c20998	RNA splicing	RNA metabolism	P	Protein SREK1IP1
ruditapes_c16445	transport	transport	P	"Mitochondrial translocator assembly and maintenance protein 41 homolog (TAM41) (MMP37-like protein, mitochondrial)"
ruditapes_c16445	protein import into mitochondrial matrix	transport	P	"Mitochondrial translocator assembly and maintenance protein 41 homolog (TAM41) (MMP37-like protein, mitochondrial)"
ruditapes_c16445	protein import into mitochondrial matrix	cell organization and biogenesis	P	"Mitochondrial translocator assembly and maintenance protein 41 homolog (TAM41) (MMP37-like protein, mitochondrial)"
ruditapes_c16445	protein transport	transport	P	"Mitochondrial translocator assembly and maintenance protein 41 homolog (TAM41) (MMP37-like protein, mitochondrial)"
ruditapes_c9096	metabolic process	other metabolic processes	P	N-acetylneuraminate lyase A (NALase A) (EC 4.1.3.3) (N-acetylneuraminate pyruvate-lyase A) (N-acetylneuraminic acid aldolase A) (Sialate lyase A) (Sialate-pyruvate lyase A) (Sialic acid aldolase A) (Sialic acid lyase A)
ruditapes_c9096	carbohydrate metabolic process	other metabolic processes	P	N-acetylneuraminate lyase A (NALase A) (EC 4.1.3.3) (N-acetylneuraminate pyruvate-lyase A) (N-acetylneuraminic acid aldolase A) (Sialate lyase A) (Sialate-pyruvate lyase A) (Sialic acid aldolase A) (Sialic acid lyase A)
ruditapes_c20206	proteolysis	protein metabolism	P	Ufm1-specific protease 2 (UfSP2) (EC 3.4.22.-)
ruditapes2_c2002	transport	transport	P	Eukaryotic initiation factor 4A-III (eIF-4A-III) (eIF4A-III) (EC 3.6.4.13) (ATP-dependent RNA helicase DDX48) (ATP-dependent RNA helicase eIF4A-3) (DEAD box protein 48) (Eukaryotic translation initiation factor 4A isoform 3)
ruditapes2_c2002	mRNA processing	RNA metabolism	P	Eukaryotic initiation factor 4A-III (eIF-4A-III) (eIF4A-III) (EC 3.6.4.13) (ATP-dependent RNA helicase DDX48) (ATP-dependent RNA helicase eIF4A-3) (DEAD box protein 48) (Eukaryotic translation initiation factor 4A isoform 3)
ruditapes2_c2002	RNA splicing	RNA metabolism	P	Eukaryotic initiation factor 4A-III (eIF-4A-III) (eIF4A-III) (EC 3.6.4.13) (ATP-dependent RNA helicase DDX48) (ATP-dependent RNA helicase eIF4A-3) (DEAD box protein 48) (Eukaryotic translation initiation factor 4A isoform 3)
ruditapes2_c2002	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Eukaryotic initiation factor 4A-III (eIF-4A-III) (eIF4A-III) (EC 3.6.4.13) (ATP-dependent RNA helicase DDX48) (ATP-dependent RNA helicase eIF4A-3) (DEAD box protein 48) (Eukaryotic translation initiation factor 4A isoform 3)
ruditapes2_c2002	mRNA transport	transport	P	Eukaryotic initiation factor 4A-III (eIF-4A-III) (eIF4A-III) (EC 3.6.4.13) (ATP-dependent RNA helicase DDX48) (ATP-dependent RNA helicase eIF4A-3) (DEAD box protein 48) (Eukaryotic translation initiation factor 4A isoform 3)
ruditapes2_c2002	regulation of translation	protein metabolism	P	Eukaryotic initiation factor 4A-III (eIF-4A-III) (eIF4A-III) (EC 3.6.4.13) (ATP-dependent RNA helicase DDX48) (ATP-dependent RNA helicase eIF4A-3) (DEAD box protein 48) (Eukaryotic translation initiation factor 4A isoform 3)
ruditapes2_c2002	rRNA processing	RNA metabolism	P	Eukaryotic initiation factor 4A-III (eIF-4A-III) (eIF4A-III) (EC 3.6.4.13) (ATP-dependent RNA helicase DDX48) (ATP-dependent RNA helicase eIF4A-3) (DEAD box protein 48) (Eukaryotic translation initiation factor 4A isoform 3)
ruditapes_c11551	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)"
ruditapes_c11551	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)"
ruditapes_c11551	ion transport	transport	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)"
ruditapes_c11551	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)"
ruditapes_c11551	proton transport	transport	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)"
ruditapes_c11551	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)"
ruditapes_c11551	transport	transport	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)"
ruditapes_c11551	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)"
ruditapes_c20524	oxidation reduction	other metabolic processes	P	"3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6) (3-hydroxyanthranilate oxygenase) (3-HAO) (3-hydroxyanthranilic acid dioxygenase) (HAD)"
ruditapes_c20524	metabolic process	other metabolic processes	P	"3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6) (3-hydroxyanthranilate oxygenase) (3-HAO) (3-hydroxyanthranilic acid dioxygenase) (HAD)"
ruditapes_c26911	threonine catabolic process	other metabolic processes	P	L-threonine 3-dehydrogenase (EC 1.1.1.103)
ruditapes_c26911	oxidation reduction	other metabolic processes	P	L-threonine 3-dehydrogenase (EC 1.1.1.103)
ruditapes_lrc17986	protein metabolic process	protein metabolism	P	Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)
ruditapes2_c3282	protein metabolic process	protein metabolism	P	Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)
ruditapes2_c3282	oxidation reduction	other metabolic processes	P	Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)
ruditapes_lrc17986	oxidation reduction	other metabolic processes	P	Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)
ruditapes_c17263	glycine betaine biosynthetic process from choline	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c17263	oxidation reduction	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c17263	cellular alcohol metabolic process	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes2_c1072	B cell activation	other biological processes	P	B-lymphocyte antigen CD20 (Membrane-spanning 4-domains subfamily A member 1) (CD antigen CD20)
ruditapes_c8574	transport	transport	P	Nucleobase-ascorbate transporter 12 (AtNAT12)
ruditapes_c8574	transmembrane transport	transport	P	Nucleobase-ascorbate transporter 12 (AtNAT12)
ruditapes_c28020	lipid catabolic process	other metabolic processes	P	GDSL esterase/lipase At1g28650 (EC 3.1.1.-) (Extracellular lipase At1g28650)
ruditapes_c28020	lipid metabolic process	other metabolic processes	P	GDSL esterase/lipase At1g28650 (EC 3.1.1.-) (Extracellular lipase At1g28650)
ruditapes_c16762	response to DNA damage stimulus	stress response	P	Uncharacterized protein YOL086W-A
ruditapes_c9702	biological_process	other biological processes	P	Putative F-box/LRR-repeat protein At5g38386
ruditapes_c23349	protein ubiquitination	protein metabolism	P	Putative U-box domain-containing protein 46 (EC 6.3.2.-) (Plant U-box protein 46)
ruditapes_c14717	phosphorylation	other metabolic processes	P	Cysteine-rich receptor-like protein kinase 21 (Cysteine-rich RLK21) (EC 2.7.11.-)
ruditapes_c14717	protein amino acid phosphorylation	protein metabolism	P	Cysteine-rich receptor-like protein kinase 21 (Cysteine-rich RLK21) (EC 2.7.11.-)
ruditapes2_c2977	biological_process	other biological processes	P	Putative protein phosphatase 2C-like protein 45 (AtPP2C45) (Protein phosphatase AP2C6)
ruditapes2_c2977	metabolic process	other metabolic processes	P	Putative protein phosphatase 2C-like protein 45 (AtPP2C45) (Protein phosphatase AP2C6)
ruditapes_c13967	biological_process	other biological processes	P	CASP-like protein At3g16300
ruditapes_c13960	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c13960	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c13960	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c13960	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c13960	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c8046	chemotaxis	other biological processes	P	Chemotaxis response regulator protein-glutamate methylesterase (EC 3.1.1.61)
ruditapes_c8046	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chemotaxis response regulator protein-glutamate methylesterase (EC 3.1.1.61)
ruditapes_c8046	two-component signal transduction system (phosphorelay)	signal transduction	P	Chemotaxis response regulator protein-glutamate methylesterase (EC 3.1.1.61)
ruditapes_c9865	metabolic process	other metabolic processes	P	Acetyl-coenzyme A synthetase (AcCoA synthetase) (Acs) (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-activating enzyme)
ruditapes2_c2280	barrier septum formation	cell organization and biogenesis	P	Cell division protein ZapC
ruditapes2_c2280	cell cycle	cell cycle and proliferation	P	Cell division protein ZapC
ruditapes2_c2280	cell division	other biological processes	P	Cell division protein ZapC
ruditapes_c28024	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes_c28024	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes_c28024	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes_c29683	glutamine metabolic process	other metabolic processes	P	Glutaminase (EC 3.5.1.2)
ruditapes_c30488	lipid biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c30488	lipid A biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_lrc27016	metabolic process	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_lrc27016	phosphorylation	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_c22288	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c22288	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c22288	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c22288	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c22288	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c16734	phosphonate transport	transport	P	Phosphonates import ATP-binding protein PhnC 2 (EC 3.6.3.28)
ruditapes_c16734	ATP catabolic process	other metabolic processes	P	Phosphonates import ATP-binding protein PhnC 2 (EC 3.6.3.28)
ruditapes_c16734	transport	transport	P	Phosphonates import ATP-binding protein PhnC 2 (EC 3.6.3.28)
ruditapes2_lrc4083	phosphonate transport	transport	P	Phosphonates import ATP-binding protein PhnC 1 (EC 3.6.3.28)
ruditapes2_lrc4083	ATP catabolic process	other metabolic processes	P	Phosphonates import ATP-binding protein PhnC 1 (EC 3.6.3.28)
ruditapes2_lrc4083	transport	transport	P	Phosphonates import ATP-binding protein PhnC 1 (EC 3.6.3.28)
ruditapes_lrc25798	DNA repair	stress response	P	Putative ski2-type helicase (EC 3.6.4.-)
ruditapes_lrc25798	DNA repair	DNA metabolism	P	Putative ski2-type helicase (EC 3.6.4.-)
ruditapes_c3747	mismatch repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c3747	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c3747	DNA repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c3747	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c3747	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutS
ruditapes2_lrc3174	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes2_lrc3174	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes2_lrc3174	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c29412	lipid biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_c29412	lipid A biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_c10474	biosynthetic process	other metabolic processes	P	Glycogen synthase 1 (EC 2.4.1.21) (Starch [bacterial glycogen] synthase 1)
ruditapes_c10474	glucan biosynthetic process	other metabolic processes	P	Glycogen synthase 1 (EC 2.4.1.21) (Starch [bacterial glycogen] synthase 1)
ruditapes_c10474	glycogen biosynthetic process	other metabolic processes	P	Glycogen synthase 1 (EC 2.4.1.21) (Starch [bacterial glycogen] synthase 1)
ruditapes_s39921	transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_lrc39292	ion transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_lrc39292	proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_s39921	proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_lrc39292	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_s39921	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_s39921	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_s39921	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_lrc39292	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_lrc39292	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_s39921	ion transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_lrc39292	transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c9982	thiamin biosynthetic process	other metabolic processes	P	Thiazole synthase (EC 2.8.1.10)
ruditapes2_c57	regulation of translation	protein metabolism	P	50S ribosomal protein L1
ruditapes2_c57	translation	protein metabolism	P	50S ribosomal protein L1
ruditapes_c8761	metabolic process	other metabolic processes	P	3-ketoacyl-CoA thiolase (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Fatty acid oxidation complex subunit beta)
ruditapes_c8761	lipid catabolic process	other metabolic processes	P	3-ketoacyl-CoA thiolase (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Fatty acid oxidation complex subunit beta)
ruditapes_c8761	fatty acid metabolic process	other metabolic processes	P	3-ketoacyl-CoA thiolase (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Fatty acid oxidation complex subunit beta)
ruditapes_c8761	lipid metabolic process	other metabolic processes	P	3-ketoacyl-CoA thiolase (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Fatty acid oxidation complex subunit beta)
ruditapes_c32565	lipid A biosynthetic process	other metabolic processes	P	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD (EC 3.5.1.n3)
ruditapes_c32565	response to antibiotic	other biological processes	P	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD (EC 3.5.1.n3)
ruditapes2_c3230	carbohydrate metabolic process	other metabolic processes	P	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD (EC 3.5.1.n3)
ruditapes_c32565	carbohydrate metabolic process	other metabolic processes	P	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD (EC 3.5.1.n3)
ruditapes_c32565	lipopolysaccharide biosynthetic process	other metabolic processes	P	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD (EC 3.5.1.n3)
ruditapes2_c3230	response to antibiotic	other biological processes	P	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD (EC 3.5.1.n3)
ruditapes2_c3230	lipid A biosynthetic process	other metabolic processes	P	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD (EC 3.5.1.n3)
ruditapes2_c3230	lipopolysaccharide biosynthetic process	other metabolic processes	P	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD (EC 3.5.1.n3)
ruditapes_c32565	lipid biosynthetic process	other metabolic processes	P	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD (EC 3.5.1.n3)
ruditapes2_c3230	lipid biosynthetic process	other metabolic processes	P	Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD (EC 3.5.1.n3)
ruditapes_c19473	lipopolysaccharide biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c19473	response to antibiotic	other biological processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c19473	lipid A biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c19473	methylation	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c19473	cellular metabolic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c19473	lipid biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c19473	oxidation reduction	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c19473	metabolic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c19473	biosynthetic process	other metabolic processes	P	"Bifunctional polymyxin resistance protein ArnA [Includes: UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) (ArnAFT) (UDP-L-Ara4N formyltransferase); UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating (EC 1.1.1.305) (ArnADH) (UDP-GlcUA decarboxylase) (UDP-glucuronic acid dehydrogenase)]"
ruditapes_c7289	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)
ruditapes_c7289	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)
ruditapes_c7289	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)
ruditapes_c818	glycogen biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_c818	glucan biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_c818	biosynthetic process	other metabolic processes	P	Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase)
ruditapes_c19386	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c19386	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c19386	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c19386	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c19386	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c12916	tyrosyl-tRNA aminoacylation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c12916	tyrosyl-tRNA aminoacylation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c12916	translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c12916	tRNA aminoacylation for protein translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c12916	tRNA aminoacylation for protein translation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c23666	DNA recombination	DNA metabolism	P	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)
ruditapes_c23666	double-strand break repair via nonhomologous end joining	stress response	P	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)
ruditapes_c23666	double-strand break repair via nonhomologous end joining	DNA metabolism	P	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)
ruditapes_c23666	response to ionizing radiation	other biological processes	P	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)
ruditapes_c23666	double-strand break repair	stress response	P	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)
ruditapes_c23666	double-strand break repair	DNA metabolism	P	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)
ruditapes_c23666	T cell differentiation	developmental processes	P	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)
ruditapes_c23666	response to DNA damage stimulus	stress response	P	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)
ruditapes_c23666	DNA repair	stress response	P	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)
ruditapes_c23666	DNA repair	DNA metabolism	P	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)
ruditapes_c23666	B cell differentiation	developmental processes	P	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)
ruditapes_c23547	biological_process	other biological processes	P	Uncharacterized protein C1orf146 homolog
ruditapes_c541	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase)
ruditapes_c541	viral genome replication	other biological processes	P	RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase)
ruditapes_c12856	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein GP350 (Membrane antigen) (MA)
ruditapes_c12856	viral infectious cycle	other biological processes	P	Envelope glycoprotein GP350 (Membrane antigen) (MA)
ruditapes_s39383	regulation of cell cycle	cell cycle and proliferation	P	Rab11 family-interacting protein 4A (FIP4-Rab11) (Rab11-FIP4-A) (zRab11-FIP4-A)
ruditapes_s39383	cell division	other biological processes	P	Rab11 family-interacting protein 4A (FIP4-Rab11) (Rab11-FIP4-A) (zRab11-FIP4-A)
ruditapes_s39383	transport	transport	P	Rab11 family-interacting protein 4A (FIP4-Rab11) (Rab11-FIP4-A) (zRab11-FIP4-A)
ruditapes_s39383	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Rab11 family-interacting protein 4A (FIP4-Rab11) (Rab11-FIP4-A) (zRab11-FIP4-A)
ruditapes_s39383	cell cycle	cell cycle and proliferation	P	Rab11 family-interacting protein 4A (FIP4-Rab11) (Rab11-FIP4-A) (zRab11-FIP4-A)
ruditapes_s39383	eye morphogenesis	developmental processes	P	Rab11 family-interacting protein 4A (FIP4-Rab11) (Rab11-FIP4-A) (zRab11-FIP4-A)
ruditapes_s39383	cytokinesis	other biological processes	P	Rab11 family-interacting protein 4A (FIP4-Rab11) (Rab11-FIP4-A) (zRab11-FIP4-A)
ruditapes_c16286	defense response to bacterium	stress response	P	Lysenin-related protein 3 (LRP-3) (eflr3) (efL3)
ruditapes_c16286	cytolysis	death	P	Lysenin-related protein 3 (LRP-3) (eflr3) (efL3)
ruditapes_c16286	ion transport	transport	P	Lysenin-related protein 3 (LRP-3) (eflr3) (efL3)
ruditapes_c16286	transport	transport	P	Lysenin-related protein 3 (LRP-3) (eflr3) (efL3)
ruditapes_c29794	pathogenesis	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c29794	"virion attachment, binding of host cell surface receptor"	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c29794	interspecies interaction between organisms	other biological processes	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes_c29794	membrane fusion	cell organization and biogenesis	P	Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2]
ruditapes2_lrc3212	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 2 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase II) (FGAM synthase II)
ruditapes2_lrc3212	'de novo' IMP biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 2 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase II) (FGAM synthase II)
ruditapes_c16507	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (Acyl-PO4 G3P acyltransferase) (Acyl-phosphate--glycerol-3-phosphate acyltransferase) (G3P acyltransferase) (GPAT) (EC 2.3.1.n3) (Lysophosphatidic acid synthase) (LPA synthase)
ruditapes_c25754	phosphate transport	transport	P	Phosphate import ATP-binding protein PstB 3 (EC 3.6.3.27) (ABC phosphate transporter 3) (Phosphate-transporting ATPase 3)
ruditapes_c25754	ATP catabolic process	other metabolic processes	P	Phosphate import ATP-binding protein PstB 3 (EC 3.6.3.27) (ABC phosphate transporter 3) (Phosphate-transporting ATPase 3)
ruditapes_c25754	transport	transport	P	Phosphate import ATP-binding protein PstB 3 (EC 3.6.3.27) (ABC phosphate transporter 3) (Phosphate-transporting ATPase 3)
ruditapes2_c107	metabolic process	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase 1 (Poly(P)/ATP NAD kinase 1) (EC 2.7.1.23)
ruditapes2_c107	phosphorylation	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase 1 (Poly(P)/ATP NAD kinase 1) (EC 2.7.1.23)
ruditapes_c12976	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c12976	carbohydrate metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c12976	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c12976	glycerol-3-phosphate catabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c12976	oxidation reduction	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c30307	glutamine metabolic process	other metabolic processes	P	Glutaminase (EC 3.5.1.2)
ruditapes_c17630	B cell differentiation	developmental processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	meiotic gene conversion	cell cycle and proliferation	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	meiotic gene conversion	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	B cell mediated immunity	other biological processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	determination of adult life span	developmental processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	isotype switching	developmental processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	meiotic mismatch repair	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	response to X-ray	other biological processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	somatic recombination of immunoglobulin gene segments	developmental processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	somatic recombination of immunoglobulin gene segments	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	cell cycle arrest	cell cycle and proliferation	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	meiotic mismatch repair	cell cycle and proliferation	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	meiotic mismatch repair	stress response	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	mismatch repair	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	response to UV-B	other biological processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	positive regulation of helicase activity	other biological processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	postreplication repair	stress response	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	postreplication repair	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	negative regulation of DNA recombination	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	negative regulation of reciprocal meiotic recombination	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	germ cell development	other biological processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	somatic recombination of immunoglobulin genes during immune response	developmental processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	somatic recombination of immunoglobulin genes during immune response	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	cell cycle	cell cycle and proliferation	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	mismatch repair	stress response	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	death	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	somatic hypermutation of immunoglobulin genes	developmental processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	maintenance of DNA repeat elements	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	maintenance of DNA repeat elements	cell organization and biogenesis	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	negative regulation of reciprocal meiotic recombination	cell cycle and proliferation	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	intra-S DNA damage checkpoint	stress response	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	ATP catabolic process	other metabolic processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	negative regulation of apoptosis	death	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	in utero embryonic development	developmental processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	signal transduction	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	stress response	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	DNA repair	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	negative regulation of neuron apoptosis	death	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	oxidative phosphorylation	other metabolic processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	intra-S DNA damage checkpoint	cell cycle and proliferation	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	intra-S DNA damage checkpoint	signal transduction	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	isotype switching	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	apoptosis	death	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	double-strand break repair	stress response	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	double-strand break repair	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	male gonad development	developmental processes	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c17630	DNA repair	stress response	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes2_c1466	"retrograde vesicle-mediated transport, Golgi to ER"	transport	P	Conserved oligomeric Golgi complex subunit 4 (COG complex subunit 4) (Component of oligomeric Golgi complex 4)
ruditapes2_c1466	protein transport	transport	P	Conserved oligomeric Golgi complex subunit 4 (COG complex subunit 4) (Component of oligomeric Golgi complex 4)
ruditapes2_c1466	transport	transport	P	Conserved oligomeric Golgi complex subunit 4 (COG complex subunit 4) (Component of oligomeric Golgi complex 4)
ruditapes2_c1466	Golgi vesicle prefusion complex stabilization	transport	P	Conserved oligomeric Golgi complex subunit 4 (COG complex subunit 4) (Component of oligomeric Golgi complex 4)
ruditapes2_c1466	Golgi vesicle prefusion complex stabilization	cell organization and biogenesis	P	Conserved oligomeric Golgi complex subunit 4 (COG complex subunit 4) (Component of oligomeric Golgi complex 4)
ruditapes2_c1466	Golgi organization	cell organization and biogenesis	P	Conserved oligomeric Golgi complex subunit 4 (COG complex subunit 4) (Component of oligomeric Golgi complex 4)
ruditapes2_c1338	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta) (CCT-zeta-1)
ruditapes2_c1338	protein folding	protein metabolism	P	T-complex protein 1 subunit zeta (TCP-1-zeta) (CCT-zeta) (CCT-zeta-1)
ruditapes2_c2305	proteolysis	protein metabolism	P	Proteasome subunit beta type-6 (EC 3.4.25.1)
ruditapes2_c2305	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-6 (EC 3.4.25.1)
ruditapes_c11970	regulation of actin filament polymerization	protein metabolism	P	Actin-related protein 2/3 complex subunit 2 (Arp2/3 complex 34 kDa subunit) (p34-ARC)
ruditapes_c11970	regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 2 (Arp2/3 complex 34 kDa subunit) (p34-ARC)
ruditapes2_lrc4649	lipid metabolic process	other metabolic processes	P	Serine incorporator 1 (Tumor differentially expressed protein 2)
ruditapes2_lrc4649	phospholipid biosynthetic process	other metabolic processes	P	Serine incorporator 1 (Tumor differentially expressed protein 2)
ruditapes_c28334	D-xylose metabolic process	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c28334	phosphorylation	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c28334	carbohydrate metabolic process	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_lrc25757	viral reproduction	other biological processes	P	Zinc finger and SCAN domain-containing protein 23 (Zinc finger protein 390) (Zinc finger protein 453)
ruditapes_lrc25757	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and SCAN domain-containing protein 23 (Zinc finger protein 390) (Zinc finger protein 453)
ruditapes_lrc25757	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and SCAN domain-containing protein 23 (Zinc finger protein 390) (Zinc finger protein 453)
ruditapes_c27480	abscisic acid mediated signaling	signal transduction	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	negative regulation of abscisic acid mediated signaling	signal transduction	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	cytokinin mediated signaling	signal transduction	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	peptidyl-histidine phosphorylation	protein metabolism	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	signal transduction	signal transduction	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	cellular response to hydrogen peroxide	stress response	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	root development	developmental processes	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	defense response	stress response	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	multicellular organismal development	developmental processes	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	ethylene mediated signaling pathway	signal transduction	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	two-component signal transduction system (phosphorelay)	signal transduction	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	negative regulation of ethylene mediated signaling pathway	signal transduction	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c27480	phosphorylation	other metabolic processes	P	Histidine kinase 5 (EC 2.7.13.3) (Arabidopsis histidine kinase 5) (AtHK5) (Protein AUTHENTIC HIS-KINASE 5) (Protein CYTOKININ-INDEPENDENT 2)
ruditapes_c11528	immune response	other biological processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c11528	B cell activation	other biological processes	P	Interleukin-4 (IL-4) (B-cell stimulatory factor 1) (BSF-1) (Lymphocyte stimulatory factor 1)
ruditapes_c9656	very-long-chain fatty acid biosynthetic process	other metabolic processes	P	Elongation of very long chain fatty acids protein 4 (EC 2.3.1.199) (3-keto acyl-CoA synthase Elovl4) (ELOVL fatty acid elongase 4) (ELOVL FA elongase 4) (Very-long-chain 3-oxoacyl-CoA synthase 4)
ruditapes_c9656	lipid biosynthetic process	other metabolic processes	P	Elongation of very long chain fatty acids protein 4 (EC 2.3.1.199) (3-keto acyl-CoA synthase Elovl4) (ELOVL fatty acid elongase 4) (ELOVL FA elongase 4) (Very-long-chain 3-oxoacyl-CoA synthase 4)
ruditapes_c9656	"fatty acid elongation, saturated fatty acid"	other metabolic processes	P	Elongation of very long chain fatty acids protein 4 (EC 2.3.1.199) (3-keto acyl-CoA synthase Elovl4) (ELOVL fatty acid elongase 4) (ELOVL FA elongase 4) (Very-long-chain 3-oxoacyl-CoA synthase 4)
ruditapes_c9656	fatty acid biosynthetic process	other metabolic processes	P	Elongation of very long chain fatty acids protein 4 (EC 2.3.1.199) (3-keto acyl-CoA synthase Elovl4) (ELOVL fatty acid elongase 4) (ELOVL FA elongase 4) (Very-long-chain 3-oxoacyl-CoA synthase 4)
ruditapes_s37300	SOS response	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_s37300	DNA repair	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_s37300	DNA repair	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_s37300	response to DNA damage stimulus	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_s37300	DNA recombination	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c7052	"regulation of transcription, DNA-dependent"	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c7052	transcription termination	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c7052	transcription termination	cell organization and biogenesis	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c7052	"transcription, DNA-dependent"	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c11073	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c11073	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c18705	glycogen biosynthetic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c18705	carbohydrate metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c18705	glycogen metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_c18848	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c18848	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_s39144	detection of stimulus involved in sensory perception	other biological processes	P	Serine/threonine-protein phosphatase with EF-hands 1 (PPEF-1) (EC 3.1.3.16)
ruditapes2_c3510	detection of stimulus involved in sensory perception	other biological processes	P	Serine/threonine-protein phosphatase with EF-hands 1 (PPEF-1) (EC 3.1.3.16)
ruditapes_c1213	detection of stimulus involved in sensory perception	other biological processes	P	Serine/threonine-protein phosphatase with EF-hands 1 (PPEF-1) (EC 3.1.3.16)
ruditapes2_c578	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein D-like (hnRNP D-like) (hnRNP DL)
ruditapes2_c400	"transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein D-like (hnRNP D-like) (hnRNP DL)
ruditapes2_c578	"transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein D-like (hnRNP D-like) (hnRNP DL)
ruditapes2_c400	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein D-like (hnRNP D-like) (hnRNP DL)
ruditapes_c23129	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor-like protein 14 (ADP-ribosylation factor 7)
ruditapes_c11357	lipid metabolic process	other metabolic processes	P	2-acylglycerol O-acyltransferase 2 (EC 2.3.1.22) (Acyl-CoA:monoacylglycerol acyltransferase 2) (MGAT2) (hMGAT2) (Diacylglycerol O-acyltransferase candidate 5) (hDC5) (Diacylglycerol acyltransferase 2-like protein 5) (Monoacylglycerol O-acyltransferase 2)
ruditapes_c11357	lipid biosynthetic process	other metabolic processes	P	2-acylglycerol O-acyltransferase 2 (EC 2.3.1.22) (Acyl-CoA:monoacylglycerol acyltransferase 2) (MGAT2) (hMGAT2) (Diacylglycerol O-acyltransferase candidate 5) (hDC5) (Diacylglycerol acyltransferase 2-like protein 5) (Monoacylglycerol O-acyltransferase 2)
ruditapes_c11357	glycerol metabolic process	other metabolic processes	P	2-acylglycerol O-acyltransferase 2 (EC 2.3.1.22) (Acyl-CoA:monoacylglycerol acyltransferase 2) (MGAT2) (hMGAT2) (Diacylglycerol O-acyltransferase candidate 5) (hDC5) (Diacylglycerol acyltransferase 2-like protein 5) (Monoacylglycerol O-acyltransferase 2)
ruditapes_c11357	diacylglycerol biosynthetic process	other metabolic processes	P	2-acylglycerol O-acyltransferase 2 (EC 2.3.1.22) (Acyl-CoA:monoacylglycerol acyltransferase 2) (MGAT2) (hMGAT2) (Diacylglycerol O-acyltransferase candidate 5) (hDC5) (Diacylglycerol acyltransferase 2-like protein 5) (Monoacylglycerol O-acyltransferase 2)
ruditapes_c11357	triglyceride biosynthetic process	other metabolic processes	P	2-acylglycerol O-acyltransferase 2 (EC 2.3.1.22) (Acyl-CoA:monoacylglycerol acyltransferase 2) (MGAT2) (hMGAT2) (Diacylglycerol O-acyltransferase candidate 5) (hDC5) (Diacylglycerol acyltransferase 2-like protein 5) (Monoacylglycerol O-acyltransferase 2)
ruditapes_c11357	intestinal absorption	other biological processes	P	2-acylglycerol O-acyltransferase 2 (EC 2.3.1.22) (Acyl-CoA:monoacylglycerol acyltransferase 2) (MGAT2) (hMGAT2) (Diacylglycerol O-acyltransferase candidate 5) (hDC5) (Diacylglycerol acyltransferase 2-like protein 5) (Monoacylglycerol O-acyltransferase 2)
ruditapes2_c1616	cytoskeleton organization	cell organization and biogenesis	P	Adenylyl cyclase-associated protein 1 (CAP 1)
ruditapes2_c1616	ameboidal cell migration	other biological processes	P	Adenylyl cyclase-associated protein 1 (CAP 1)
ruditapes2_c1616	cell morphogenesis	cell organization and biogenesis	P	Adenylyl cyclase-associated protein 1 (CAP 1)
ruditapes2_c1616	actin cytoskeleton organization	cell organization and biogenesis	P	Adenylyl cyclase-associated protein 1 (CAP 1)
ruditapes2_c1616	receptor-mediated endocytosis	transport	P	Adenylyl cyclase-associated protein 1 (CAP 1)
ruditapes2_c1616	receptor-mediated endocytosis	cell organization and biogenesis	P	Adenylyl cyclase-associated protein 1 (CAP 1)
ruditapes_c12526	"complement activation, classical pathway"	stress response	P	Complement C2 (EC 3.4.21.43) (C3/C5 convertase) [Cleaved into: Complement C2b fragment; Complement C2a fragment]
ruditapes_c12526	"complement activation, classical pathway"	protein metabolism	P	Complement C2 (EC 3.4.21.43) (C3/C5 convertase) [Cleaved into: Complement C2b fragment; Complement C2a fragment]
ruditapes_c12526	innate immune response	stress response	P	Complement C2 (EC 3.4.21.43) (C3/C5 convertase) [Cleaved into: Complement C2b fragment; Complement C2a fragment]
ruditapes_c12526	complement activation	stress response	P	Complement C2 (EC 3.4.21.43) (C3/C5 convertase) [Cleaved into: Complement C2b fragment; Complement C2a fragment]
ruditapes_c12526	complement activation	protein metabolism	P	Complement C2 (EC 3.4.21.43) (C3/C5 convertase) [Cleaved into: Complement C2b fragment; Complement C2a fragment]
ruditapes_c12526	proteolysis	protein metabolism	P	Complement C2 (EC 3.4.21.43) (C3/C5 convertase) [Cleaved into: Complement C2b fragment; Complement C2a fragment]
ruditapes_lrc38036	protein amino acid phosphorylation	protein metabolism	P	MAP kinase-activated protein kinase 3 (MAPK-activated protein kinase 3) (MAPKAP kinase 3) (MAPKAP-K3) (MAPKAPK-3) (MK-3) (EC 2.7.11.1)
ruditapes_lrc38036	response to stress	stress response	P	MAP kinase-activated protein kinase 3 (MAPK-activated protein kinase 3) (MAPKAP kinase 3) (MAPKAP-K3) (MAPKAPK-3) (MK-3) (EC 2.7.11.1)
ruditapes_lrc38036	response to lipopolysaccharide	other biological processes	P	MAP kinase-activated protein kinase 3 (MAPK-activated protein kinase 3) (MAPKAP kinase 3) (MAPKAP-K3) (MAPKAPK-3) (MK-3) (EC 2.7.11.1)
ruditapes_lrc38036	phosphorylation	other metabolic processes	P	MAP kinase-activated protein kinase 3 (MAPK-activated protein kinase 3) (MAPKAP kinase 3) (MAPKAP-K3) (MAPKAPK-3) (MK-3) (EC 2.7.11.1)
ruditapes_lrc38036	toll-like receptor signaling pathway	signal transduction	P	MAP kinase-activated protein kinase 3 (MAPK-activated protein kinase 3) (MAPKAP kinase 3) (MAPKAP-K3) (MAPKAPK-3) (MK-3) (EC 2.7.11.1)
ruditapes_lrc38036	toll-like receptor signaling pathway	stress response	P	MAP kinase-activated protein kinase 3 (MAPK-activated protein kinase 3) (MAPKAP kinase 3) (MAPKAP-K3) (MAPKAPK-3) (MK-3) (EC 2.7.11.1)
ruditapes_lrc40206	D-xylose metabolic process	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_lrc40206	carbohydrate metabolic process	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_lrc40206	phosphorylation	other metabolic processes	P	Xylulose kinase (Xylulokinase) (EC 2.7.1.17)
ruditapes_c14216	IMP metabolic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	IMP salvage	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	dendrite morphogenesis	developmental processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	dendrite morphogenesis	cell organization and biogenesis	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	cytolysis	death	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	protein homotetramerization	cell organization and biogenesis	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	GMP catabolic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	cerebral cortex neuron differentiation	developmental processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	lymphocyte proliferation	cell cycle and proliferation	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	grooming behavior	other biological processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	hypoxanthine metabolic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	adenine salvage	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	guanine salvage	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	purine nucleotide biosynthetic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	hypoxanthine salvage	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	nucleoside metabolic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	behavior	other biological processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	purine ribonucleoside salvage	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	central nervous system neuron development	developmental processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	positive regulation of dopamine metabolic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	response to amphetamine	other biological processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	GMP salvage	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	glucose 1-phosphate metabolic process	other metabolic processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c14216	striatum development	developmental processes	P	Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) (HGPRTase) (EC 2.4.2.8)
ruditapes_c31934	ribosome biogenesis	other biological processes	P	Nucleolar protein 56 (Nucleolar protein 5A)
ruditapes_c8023	protein import into mitochondrial inner membrane	transport	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes_c8023	protein import into mitochondrial inner membrane	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes_c8023	protein transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes_c9364	protein import into mitochondrial inner membrane	transport	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes_c9364	protein import into mitochondrial inner membrane	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes_c9364	transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes_c9364	protein targeting to mitochondrion	transport	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes_c9364	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes_c8023	transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes_c8023	protein targeting to mitochondrion	transport	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes_c8023	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes_c9364	protein transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim8 B
ruditapes2_lrc6160	multicellular organismal development	developmental processes	P	WD repeat-containing protein 18
ruditapes_c25104	drug metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 1 (EC 1.1.1.184) (15-hydroxyprostaglandin dehydrogenase [NADP(+)]) (EC 1.1.1.197) (NADPH-dependent carbonyl reductase 1) (Prostaglandin 9-ketoreductase) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189)
ruditapes_c25104	oxidation reduction	other metabolic processes	P	Carbonyl reductase [NADPH] 1 (EC 1.1.1.184) (15-hydroxyprostaglandin dehydrogenase [NADP(+)]) (EC 1.1.1.197) (NADPH-dependent carbonyl reductase 1) (Prostaglandin 9-ketoreductase) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189)
ruditapes_c25104	vitamin K metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 1 (EC 1.1.1.184) (15-hydroxyprostaglandin dehydrogenase [NADP(+)]) (EC 1.1.1.197) (NADPH-dependent carbonyl reductase 1) (Prostaglandin 9-ketoreductase) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189)
ruditapes_c25104	metabolic process	other metabolic processes	P	Carbonyl reductase [NADPH] 1 (EC 1.1.1.184) (15-hydroxyprostaglandin dehydrogenase [NADP(+)]) (EC 1.1.1.197) (NADPH-dependent carbonyl reductase 1) (Prostaglandin 9-ketoreductase) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189)
ruditapes_c29330	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (EC 2.4.99.18) (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDa subunit) (Ribophorin II) (RPN-II) (Ribophorin-2)
ruditapes_c19383	angiogenesis	developmental processes	P	Angio-associated migratory cell protein
ruditapes_c19383	positive regulation of endothelial cell migration	other biological processes	P	Angio-associated migratory cell protein
ruditapes_c19383	positive regulation of angiogenesis	developmental processes	P	Angio-associated migratory cell protein
ruditapes_c19383	multicellular organismal development	developmental processes	P	Angio-associated migratory cell protein
ruditapes_c19383	cell differentiation	other biological processes	P	Angio-associated migratory cell protein
ruditapes_c19383	smooth muscle cell migration	other biological processes	P	Angio-associated migratory cell protein
ruditapes_c18014	phospholipid biosynthetic process	other metabolic processes	P	Lysophospholipid acyltransferase 5 (LPLAT 5) (EC 2.3.1.-) (1-acylglycerophosphocholine O-acyltransferase) (EC 2.3.1.23) (Lysophosphatidylcholine acyltransferase 3) (Lyso-PC acyltransferase 3) (Membrane-bound O-acyltransferase domain-containing protein 5) (O-acyltransferase domain-containing protein 5)
ruditapes_c19694	GPI anchor biosynthetic process	protein metabolism	P	GPI transamidase component PIG-S (Phosphatidylinositol-glycan biosynthesis class S protein)
ruditapes_c22104	lipopolysaccharide biosynthetic process	other metabolic processes	P	N-acylneuraminate cytidylyltransferase (EC 2.7.7.43) (CMP-N-acetylneuraminic acid synthase) (CMP-NeuNAc synthase)
ruditapes_c20924	proteolysis	protein metabolism	P	"Metalloendopeptidase OMA1, mitochondrial (EC 3.4.24.-) (Overlapping with the m-AAA protease 1 homolog)"
ruditapes_lrc25569	proteasome assembly	cell organization and biogenesis	P	Proteasome maturation protein (Proteassemblin)
ruditapes2_c3993	proteasome assembly	cell organization and biogenesis	P	Proteasome maturation protein (Proteassemblin)
ruditapes_lrc32326	proteasome assembly	cell organization and biogenesis	P	Proteasome maturation protein (Proteassemblin)
ruditapes2_c6046	proteasome assembly	cell organization and biogenesis	P	Proteasome maturation protein (Proteassemblin)
ruditapes2_c3895	proteasome assembly	cell organization and biogenesis	P	Proteasome maturation protein (Proteassemblin)
ruditapes_c13005	epithelial cell maturation	developmental processes	P	X-box-binding protein 1 (XBP-1)
ruditapes_c13005	"transcription, DNA-dependent"	RNA metabolism	P	X-box-binding protein 1 (XBP-1)
ruditapes_c13005	"regulation of transcription, DNA-dependent"	RNA metabolism	P	X-box-binding protein 1 (XBP-1)
ruditapes_c13005	epithelial cell maturation involved in salivary gland development	developmental processes	P	X-box-binding protein 1 (XBP-1)
ruditapes_c13005	exocrine pancreas development	developmental processes	P	X-box-binding protein 1 (XBP-1)
ruditapes_c4882	signal transduction	signal transduction	P	Fibrinogen-like protein 1
ruditapes_c17232	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c17232	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c17232	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes_c17232	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.239) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)
ruditapes2_c1542	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit zeta-2 (TCP-1-zeta-2) (CCT-zeta-2)
ruditapes2_c1542	protein folding	protein metabolism	P	T-complex protein 1 subunit zeta-2 (TCP-1-zeta-2) (CCT-zeta-2)
ruditapes2_c4497	translation	protein metabolism	P	40S ribosomal protein S27-like
ruditapes2_c5965	translation	protein metabolism	P	40S ribosomal protein S27-like
ruditapes_lrc33390	translation	protein metabolism	P	40S ribosomal protein S27-like
ruditapes_lrc34958	translation	protein metabolism	P	40S ribosomal protein S27-like
ruditapes_lrc32513	translation	protein metabolism	P	40S ribosomal protein S27-like
ruditapes_lrc32399	translation	protein metabolism	P	40S ribosomal protein S27-like
ruditapes2_c4438	translation	protein metabolism	P	40S ribosomal protein S27-like
ruditapes2_c824	immune response	other biological processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	positive regulation of interferon-gamma biosynthetic process	other metabolic processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	natural killer cell mediated cytotoxicity	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	natural killer cell mediated cytotoxicity	death	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	"transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	negative regulation of transcription factor activity	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	positive regulation of DNA repair	DNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	enucleate erythrocyte differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	B cell differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	"transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	positive regulation of DNA repair	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	positive regulation of interferon-gamma biosynthetic process	other metabolic processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	positive regulation of DNA repair	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	positive regulation of DNA repair	DNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	mRNA metabolic process	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	natural killer cell mediated cytotoxicity	death	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	negative regulation of transcription factor activity	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	positive regulation of interferon-gamma biosynthetic process	other metabolic processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	natural killer cell mediated cytotoxicity	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	natural killer cell mediated cytotoxicity	death	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	positive regulation of DNA repair	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	positive regulation of DNA repair	DNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	natural killer cell mediated cytotoxicity	stress response	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	"transcription, DNA-dependent"	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	mRNA metabolic process	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	immune response	other biological processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	enucleate erythrocyte differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c824	B cell differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	immune response	other biological processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	B cell differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	negative regulation of transcription factor activity	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c181	enucleate erythrocyte differentiation	developmental processes	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3042	mRNA metabolic process	RNA metabolism	P	CCAAT/enhancer-binding protein gamma (C/EBP gamma)
ruditapes2_c3486	translation	protein metabolism	P	"39S ribosomal protein L16, mitochondrial (L16mt) (MRP-L16)"
ruditapes_c8145	protein folding	protein metabolism	P	T-complex protein 1 subunit gamma (TCP-1-gamma) (CCT-gamma)
ruditapes_c8145	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit gamma (TCP-1-gamma) (CCT-gamma)
ruditapes_c25875	chromosome segregation	other biological processes	P	Centromere protein H (CENP-H)
ruditapes_c25875	cell division	other biological processes	P	Centromere protein H (CENP-H)
ruditapes_c2038	translation	protein metabolism	P	"39S ribosomal protein L17, mitochondrial (L17mt) (MRP-L17)"
ruditapes_c11166	apoptosis	death	P	Caspase-6 (CASP-6) (EC 3.4.22.59) [Cleaved into: Caspase-6 subunit p18; Caspase-6 subunit p11]
ruditapes_c11166	proteolysis	protein metabolism	P	Caspase-6 (CASP-6) (EC 3.4.22.59) [Cleaved into: Caspase-6 subunit p18; Caspase-6 subunit p11]
ruditapes_lrc34445	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35823	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35823	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35362	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35823	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35823	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35823	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35362	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc34445	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35362	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc34445	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc34445	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35362	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35823	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc34445	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35362	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc35362	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc34445	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_c12535	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 14 homolog A
ruditapes_c12535	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 14 homolog A
ruditapes_c20565	sulfation	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c31526	lipid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c20565	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c31526	flavonoid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c31526	metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c20565	steroid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c31526	thyroid hormone metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c20565	thyroid hormone metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c31526	steroid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c20565	phenol metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c31526	phenol metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c31526	sulfation	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c20565	flavonoid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c20565	lipid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c31526	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c20565	metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-)
ruditapes_c5534	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit E (eIF3e) (Eukaryotic translation initiation factor 3 subunit 6) (eIF-3 p48)
ruditapes_c5534	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit E (eIF3e) (Eukaryotic translation initiation factor 3 subunit 6) (eIF-3 p48)
ruditapes_c5534	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Eukaryotic translation initiation factor 3 subunit E (eIF3e) (Eukaryotic translation initiation factor 3 subunit 6) (eIF-3 p48)
ruditapes_c28484	transport	transport	P	Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56)
ruditapes_c28484	mRNA export from nucleus	transport	P	Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56)
ruditapes_c28484	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56)
ruditapes_c28484	mRNA transport	transport	P	Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56)
ruditapes_c28484	RNA splicing	RNA metabolism	P	Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56)
ruditapes_c28484	mRNA processing	RNA metabolism	P	Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56)
ruditapes_c28484	intronless viral mRNA export from host nucleus	transport	P	Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56)
ruditapes_c28484	spliceosome assembly	RNA metabolism	P	Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56)
ruditapes_c28484	spliceosome assembly	cell organization and biogenesis	P	Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56)
ruditapes_c28484	RNA secondary structure unwinding	RNA metabolism	P	Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56)
ruditapes_c15640	protein transport	transport	P	Vacuolar protein sorting-associated protein 28 homolog (ESCRT-I complex subunit VPS28)
ruditapes_c15640	transport	transport	P	Vacuolar protein sorting-associated protein 28 homolog (ESCRT-I complex subunit VPS28)
ruditapes_c15640	negative regulation of protein ubiquitination	protein metabolism	P	Vacuolar protein sorting-associated protein 28 homolog (ESCRT-I complex subunit VPS28)
ruditapes_c19180	response to DNA damage stimulus	stress response	P	Tyrosyl-DNA phosphodiesterase 2 (Tyr-DNA phosphodiesterase 2) (EC 3.1.4.-) (5'-tyrosyl-DNA phosphodiesterase) (5'-Tyr-DNA phosphodiesterase) (TRAF and TNF receptor-associated protein)
ruditapes_c19180	DNA repair	stress response	P	Tyrosyl-DNA phosphodiesterase 2 (Tyr-DNA phosphodiesterase 2) (EC 3.1.4.-) (5'-tyrosyl-DNA phosphodiesterase) (5'-Tyr-DNA phosphodiesterase) (TRAF and TNF receptor-associated protein)
ruditapes_c19180	DNA repair	DNA metabolism	P	Tyrosyl-DNA phosphodiesterase 2 (Tyr-DNA phosphodiesterase 2) (EC 3.1.4.-) (5'-tyrosyl-DNA phosphodiesterase) (5'-Tyr-DNA phosphodiesterase) (TRAF and TNF receptor-associated protein)
ruditapes_c19180	double-strand break repair	stress response	P	Tyrosyl-DNA phosphodiesterase 2 (Tyr-DNA phosphodiesterase 2) (EC 3.1.4.-) (5'-tyrosyl-DNA phosphodiesterase) (5'-Tyr-DNA phosphodiesterase) (TRAF and TNF receptor-associated protein)
ruditapes_c19180	double-strand break repair	DNA metabolism	P	Tyrosyl-DNA phosphodiesterase 2 (Tyr-DNA phosphodiesterase 2) (EC 3.1.4.-) (5'-tyrosyl-DNA phosphodiesterase) (5'-Tyr-DNA phosphodiesterase) (TRAF and TNF receptor-associated protein)
ruditapes_c10883	protein secretion	transport	P	N-acetylglucosamine-1-phosphotransferase subunits alpha/beta (EC 2.7.8.17) (GlcNAc-1-phosphotransferase subunits alpha/beta) (Stealth protein GNPTAB) (UDP-N-acetylglucosamine-1-phosphotransferase subunits alpha/beta) [Cleaved into: N-acetylglucosamine-1-phosphotransferase subunit alpha; N-acetylglucosamine-1-phosphotransferase subunit beta]
ruditapes_c10883	cell differentiation	other biological processes	P	N-acetylglucosamine-1-phosphotransferase subunits alpha/beta (EC 2.7.8.17) (GlcNAc-1-phosphotransferase subunits alpha/beta) (Stealth protein GNPTAB) (UDP-N-acetylglucosamine-1-phosphotransferase subunits alpha/beta) [Cleaved into: N-acetylglucosamine-1-phosphotransferase subunit alpha; N-acetylglucosamine-1-phosphotransferase subunit beta]
ruditapes_c10883	carbohydrate phosphorylation	other metabolic processes	P	N-acetylglucosamine-1-phosphotransferase subunits alpha/beta (EC 2.7.8.17) (GlcNAc-1-phosphotransferase subunits alpha/beta) (Stealth protein GNPTAB) (UDP-N-acetylglucosamine-1-phosphotransferase subunits alpha/beta) [Cleaved into: N-acetylglucosamine-1-phosphotransferase subunit alpha; N-acetylglucosamine-1-phosphotransferase subunit beta]
ruditapes_c15148	biological_process	other biological processes	P	JmjC domain-containing protein 8 (Jumonji domain-containing protein 8)
ruditapes_c29372	beta-amyloid formation	other metabolic processes	P	Gamma-secretase-activating protein (GSAP) (Protein pigeon homolog) [Cleaved into: Gamma-secretase-activating protein 16 kDa C-terminal form (GSAP-16K)]
ruditapes_c29372	regulation of proteolysis	protein metabolism	P	Gamma-secretase-activating protein (GSAP) (Protein pigeon homolog) [Cleaved into: Gamma-secretase-activating protein 16 kDa C-terminal form (GSAP-16K)]
ruditapes_lrc30530	protein amino acid glycosylation	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B (Oligosaccharyl transferase subunit STT3B) (STT3-B) (EC 2.4.99.18) (B6dom1 antigen) (Source of immunodominant MHC-associated peptides)
ruditapes_lrc30530	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B (Oligosaccharyl transferase subunit STT3B) (STT3-B) (EC 2.4.99.18) (B6dom1 antigen) (Source of immunodominant MHC-associated peptides)
ruditapes2_c2464	regulation of translational fidelity	protein metabolism	P	Alanyl-tRNA editing protein Aarsd1 (Alanyl-tRNA deacylase alaX) (AlaX) (AlaXp-II) (Alanyl-tRNA synthetase domain-containing protein 1)
ruditapes2_c2464	tRNA aminoacylation	RNA metabolism	P	Alanyl-tRNA editing protein Aarsd1 (Alanyl-tRNA deacylase alaX) (AlaX) (AlaXp-II) (Alanyl-tRNA synthetase domain-containing protein 1)
ruditapes2_c2464	alanyl-tRNA aminoacylation	protein metabolism	P	Alanyl-tRNA editing protein Aarsd1 (Alanyl-tRNA deacylase alaX) (AlaX) (AlaXp-II) (Alanyl-tRNA synthetase domain-containing protein 1)
ruditapes2_c2464	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanyl-tRNA editing protein Aarsd1 (Alanyl-tRNA deacylase alaX) (AlaX) (AlaXp-II) (Alanyl-tRNA synthetase domain-containing protein 1)
ruditapes2_c2464	translation	protein metabolism	P	Alanyl-tRNA editing protein Aarsd1 (Alanyl-tRNA deacylase alaX) (AlaX) (AlaXp-II) (Alanyl-tRNA synthetase domain-containing protein 1)
ruditapes_c14402	biological_process	other biological processes	P	"2',5'-phosphodiesterase 12 (2'-PDE) (2-PDE) (EC 3.1.4.-)"
ruditapes_c5478	ubiquitin-dependent protein catabolic process	protein metabolism	P	U4/U6.U5 tri-snRNP-associated protein 2 (Inactive ubiquitin-specific peptidase 39)
ruditapes_c5478	mRNA processing	RNA metabolism	P	U4/U6.U5 tri-snRNP-associated protein 2 (Inactive ubiquitin-specific peptidase 39)
ruditapes_c5478	RNA splicing	RNA metabolism	P	U4/U6.U5 tri-snRNP-associated protein 2 (Inactive ubiquitin-specific peptidase 39)
ruditapes_c24347	biological_process	other biological processes	P	Protein FAM98A
ruditapes_c26507	biological_process	other biological processes	P	Uncharacterized protein C1orf112 homolog
ruditapes_c14162	biological_process	other biological processes	P	HERV-H LTR-associating protein 1 homolog
ruditapes_c14411	biological_process	other biological processes	P	NXPE family member 2 (Protein FAM55B)
ruditapes_s36051	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase HACE1 (EC 6.3.2.-) (HECT domain and ankyrin repeat-containing E3 ubiquitin-protein ligase 1)
ruditapes_s36051	protein modification process	protein metabolism	P	E3 ubiquitin-protein ligase HACE1 (EC 6.3.2.-) (HECT domain and ankyrin repeat-containing E3 ubiquitin-protein ligase 1)
ruditapes_c25177	positive regulation of BMP signaling pathway	signal transduction	P	Kielin/chordin-like protein (Cysteine-rich BMP regulator 2) (Cysteine-rich motor neuron 2 protein) (CRIM-2) (Kielin/chordin-like protein 1) (KCP-1)
ruditapes_c26140	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 174
ruditapes_c26140	signal transduction	signal transduction	P	Probable G-protein coupled receptor 174
ruditapes_c26140	biological_process	other biological processes	P	Probable G-protein coupled receptor 174
ruditapes_c32205	biological_process	other biological processes	P	von Willebrand factor C and EGF domain-containing protein
ruditapes2_c2422	DNA repair	stress response	P	AP-5 complex subunit zeta-1 (Adapter-related protein complex 5 zeta subunit) (Zeta5)
ruditapes2_c2422	DNA repair	DNA metabolism	P	AP-5 complex subunit zeta-1 (Adapter-related protein complex 5 zeta subunit) (Zeta5)
ruditapes2_c2422	response to DNA damage stimulus	stress response	P	AP-5 complex subunit zeta-1 (Adapter-related protein complex 5 zeta subunit) (Zeta5)
ruditapes2_c2422	double-strand break repair via homologous recombination	stress response	P	AP-5 complex subunit zeta-1 (Adapter-related protein complex 5 zeta subunit) (Zeta5)
ruditapes2_c2422	double-strand break repair via homologous recombination	DNA metabolism	P	AP-5 complex subunit zeta-1 (Adapter-related protein complex 5 zeta subunit) (Zeta5)
ruditapes_c13322	eye morphogenesis	developmental processes	P	Collagen alpha-2(V) chain
ruditapes_c13322	skin development	developmental processes	P	Collagen alpha-2(V) chain
ruditapes_c13322	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-2(V) chain
ruditapes_c13322	skeletal system development	developmental processes	P	Collagen alpha-2(V) chain
ruditapes_c24219	biological_process	other biological processes	P	RING finger and transmembrane domain-containing protein 2 (Transmembrane protein 118)
ruditapes_c7651	RNA metabolic process	RNA metabolism	P	Nucleolar MIF4G domain-containing protein 1 (SGD1 homolog)
ruditapes_c3473	signal transduction	signal transduction	P	Mas-related G-protein coupled receptor member B1
ruditapes_c3473	G-protein coupled receptor protein signaling pathway	signal transduction	P	Mas-related G-protein coupled receptor member B1
ruditapes_c8922	multicellular organismal development	developmental processes	P	Plexin-D1
ruditapes_c8922	dichotomous subdivision of terminal units involved in salivary gland branching	developmental processes	P	Plexin-D1
ruditapes_c8922	patterning of blood vessels	developmental processes	P	Plexin-D1
ruditapes_c8922	signal transduction	signal transduction	P	Plexin-D1
ruditapes_s39195	biological_process	other biological processes	P	5'-nucleotidase domain-containing protein 3 (EC 3.1.3.-) (GRP94-neighboring nucleotidase)
ruditapes_c31345	signal transduction	signal transduction	P	Teneurin-4 (Ten-4) (Downstream of CHOP4) (Protein Odd Oz/ten-m homolog 4) (Tenascin-M4) (Ten-m4) (Teneurin transmembrane protein 4)
ruditapes_c31345	gastrulation with mouth forming second	developmental processes	P	Teneurin-4 (Ten-4) (Downstream of CHOP4) (Protein Odd Oz/ten-m homolog 4) (Tenascin-M4) (Ten-m4) (Teneurin transmembrane protein 4)
ruditapes_c26089	cellular response to starvation	stress response	P	Trinucleotide repeat-containing gene 6A protein
ruditapes_c26089	"gene silencing by miRNA, negative regulation of translation"	protein metabolism	P	Trinucleotide repeat-containing gene 6A protein
ruditapes_c26089	gene silencing by RNA	other metabolic processes	P	Trinucleotide repeat-containing gene 6A protein
ruditapes_c26089	regulation of translation	protein metabolism	P	Trinucleotide repeat-containing gene 6A protein
ruditapes_c26301	biological_process	other biological processes	P	Protein dopey-2
ruditapes_c26301	transport	transport	P	Protein dopey-2
ruditapes_c26301	protein transport	transport	P	Protein dopey-2
ruditapes_c30891	biological_process	other biological processes	P	Protein SOGA2 (Coiled-coil domain-containing protein 165)
ruditapes_c15000	histone monoubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase DTX3L (EC 6.3.2.-) (Protein deltex-3-like)
ruditapes_c15000	histone monoubiquitination	cell organization and biogenesis	P	E3 ubiquitin-protein ligase DTX3L (EC 6.3.2.-) (Protein deltex-3-like)
ruditapes_c15000	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase DTX3L (EC 6.3.2.-) (Protein deltex-3-like)
ruditapes_c15000	chromatin modification	cell organization and biogenesis	P	E3 ubiquitin-protein ligase DTX3L (EC 6.3.2.-) (Protein deltex-3-like)
ruditapes_c21572	biological_process	other biological processes	P	Failed axon connections homolog
ruditapes_c27601	positive regulation of GTPase activity	other biological processes	P	Ankyrin repeat domain-containing protein 27 (VPS9 domain-containing protein) (VPS9-ankyrin-repeat protein)
ruditapes_c27601	early endosome to late endosome transport	transport	P	Ankyrin repeat domain-containing protein 27 (VPS9 domain-containing protein) (VPS9-ankyrin-repeat protein)
ruditapes_c14704	cell redox homeostasis	other biological processes	P	Selenoprotein H (SelH)
ruditapes_c18530	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and SCAN domain-containing protein 10 (Zinc finger protein 206)
ruditapes_c18530	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and SCAN domain-containing protein 10 (Zinc finger protein 206)
ruditapes_c18530	viral reproduction	other biological processes	P	Zinc finger and SCAN domain-containing protein 10 (Zinc finger protein 206)
ruditapes_c18530	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and SCAN domain-containing protein 10 (Zinc finger protein 206)
ruditapes_c18530	stem cell differentiation	other biological processes	P	Zinc finger and SCAN domain-containing protein 10 (Zinc finger protein 206)
ruditapes_c19398	biological_process	other biological processes	P	Zinc finger CCHC domain-containing protein 16 (Mammalian retrotransposon-derived protein 4) (Sushi-XF2b protein)
ruditapes_c18225	protein amino acid glycosylation	protein metabolism	P	"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (BGnT-6) (Beta-1,3-Gn-T6) (Beta-1,3-N-acetylglucosaminyltransferase 6) (Beta3Gn-T6) (EC 2.4.1.-) (Core 3 synthase)"
ruditapes_c14828	"negative regulation of nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	"Splicing factor, suppressor of white-apricot homolog (Splicing factor, arginine/serine-rich 8) (Suppressor of white apricot protein homolog)"
ruditapes_c14828	RNA splicing	RNA metabolism	P	"Splicing factor, suppressor of white-apricot homolog (Splicing factor, arginine/serine-rich 8) (Suppressor of white apricot protein homolog)"
ruditapes_c14828	mRNA processing	RNA metabolism	P	"Splicing factor, suppressor of white-apricot homolog (Splicing factor, arginine/serine-rich 8) (Suppressor of white apricot protein homolog)"
ruditapes_c14828	"transcription, DNA-dependent"	RNA metabolism	P	"Splicing factor, suppressor of white-apricot homolog (Splicing factor, arginine/serine-rich 8) (Suppressor of white apricot protein homolog)"
ruditapes_c14828	RNA processing	RNA metabolism	P	"Splicing factor, suppressor of white-apricot homolog (Splicing factor, arginine/serine-rich 8) (Suppressor of white apricot protein homolog)"
ruditapes_c14828	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Splicing factor, suppressor of white-apricot homolog (Splicing factor, arginine/serine-rich 8) (Suppressor of white apricot protein homolog)"
ruditapes_c12324	biological_process	other biological processes	P	UPF0764 protein C16orf89 homolog
ruditapes2_c2815	oxidation reduction	other metabolic processes	P	FAD-dependent oxidoreductase domain-containing protein 2
ruditapes2_c2815	ER-associated protein catabolic process	protein metabolism	P	FAD-dependent oxidoreductase domain-containing protein 2
ruditapes_c9343	biological_process	other biological processes	P	Eukaryotic translation initiation factor 4E type 1B (Oocyte-specific eukaryotic translation initiation factor 4E-like)
ruditapes_c9343	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 4E type 1B (Oocyte-specific eukaryotic translation initiation factor 4E-like)
ruditapes_c9343	translation	protein metabolism	P	Eukaryotic translation initiation factor 4E type 1B (Oocyte-specific eukaryotic translation initiation factor 4E-like)
ruditapes_c3402	microtubule cytoskeleton organization	cell organization and biogenesis	P	Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1) (CDC42-binding protein kinase alpha)
ruditapes_c3402	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1) (CDC42-binding protein kinase alpha)
ruditapes_c3402	nuclear migration	other biological processes	P	Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1) (CDC42-binding protein kinase alpha)
ruditapes_c3402	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1) (CDC42-binding protein kinase alpha)
ruditapes_c25495	positive regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 24
ruditapes_c25495	regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 24
ruditapes_c25495	neuron projection development	developmental processes	P	TBC1 domain family member 24
ruditapes_c25495	neuron projection development	cell organization and biogenesis	P	TBC1 domain family member 24
ruditapes_c25495	positive regulation of GTPase activity	other biological processes	P	TBC1 domain family member 24
ruditapes_c4531	biological_process	other biological processes	P	Transmembrane and TPR repeat-containing protein 1
ruditapes_c6327	proteolysis	protein metabolism	P	Endoplasmic reticulum metallopeptidase 1 (EC 3.4.-.-) (Felix-ina)
ruditapes_c6327	ovarian follicle development	developmental processes	P	Endoplasmic reticulum metallopeptidase 1 (EC 3.4.-.-) (Felix-ina)
ruditapes_c19401	biological_process	other biological processes	P	Uncharacterized protein C12orf43 homolog
ruditapes_c25635	biological_process	other biological processes	P	"Dynein assembly factor 3, axonemal"
ruditapes_c30562	negative regulation of phosphatase activity	other metabolic processes	P	Protein SFI1 homolog
ruditapes_c9629	regulation of small GTPase mediated signal transduction	signal transduction	P	GTPase-activating Rap/Ran-GAP domain-like protein 3
ruditapes_c9629	biological_process	other biological processes	P	GTPase-activating Rap/Ran-GAP domain-like protein 3
ruditapes_c9629	positive regulation of GTPase activity	other biological processes	P	GTPase-activating Rap/Ran-GAP domain-like protein 3
ruditapes_c24203	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 12, axonemal (Axonemal beta dynein heavy chain 12) (Axonemal dynein heavy chain 12-like protein) (Axonemal dynein heavy chain 7-like protein) (Ciliary dynein heavy chain 12)"
ruditapes_c24203	microtubule-based movement	other biological processes	P	"Dynein heavy chain 12, axonemal (Axonemal beta dynein heavy chain 12) (Axonemal dynein heavy chain 12-like protein) (Axonemal dynein heavy chain 7-like protein) (Ciliary dynein heavy chain 12)"
ruditapes_c10161	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 12, axonemal (Axonemal beta dynein heavy chain 12) (Axonemal dynein heavy chain 12-like protein) (Axonemal dynein heavy chain 7-like protein) (Ciliary dynein heavy chain 12)"
ruditapes_c10161	microtubule-based movement	other biological processes	P	"Dynein heavy chain 12, axonemal (Axonemal beta dynein heavy chain 12) (Axonemal dynein heavy chain 12-like protein) (Axonemal dynein heavy chain 7-like protein) (Ciliary dynein heavy chain 12)"
ruditapes_c14160	proteolysis	protein metabolism	P	Transmembrane protease serine 12 (EC 3.4.21.-)
ruditapes_c14160	biological_process	other biological processes	P	Transmembrane protease serine 12 (EC 3.4.21.-)
ruditapes_c28148	extracellular matrix organization	cell organization and biogenesis	P	Olfactomedin-like protein 2B (Photomedin-2)
ruditapes_c14604	biological_process	other biological processes	P	Uncharacterized protein CXorf65 homolog
ruditapes_c13171	cell differentiation	other biological processes	P	Keratinocyte differentiation-associated protein
ruditapes2_c1832	DNA recombination	DNA metabolism	P	Putative transposase ORF457
ruditapes2_c1832	transposition	other biological processes	P	Putative transposase ORF457
ruditapes_c4823	cholesterol metabolic process	other metabolic processes	P	Cholesteryl ester transfer protein
ruditapes_c4823	lipid metabolic process	other metabolic processes	P	Cholesteryl ester transfer protein
ruditapes_c4823	reverse cholesterol transport	transport	P	Cholesteryl ester transfer protein
ruditapes_c4823	lipid transport	transport	P	Cholesteryl ester transfer protein
ruditapes_c4823	transport	transport	P	Cholesteryl ester transfer protein
ruditapes_c4823	steroid metabolic process	other metabolic processes	P	Cholesteryl ester transfer protein
ruditapes_c11328	positive regulation of cellular protein metabolic process	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of macrophage differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of protein amino acid autophosphorylation	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	fatty acid beta-oxidation	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of phagocytosis	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of phagocytosis	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	glucose metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	low-density lipoprotein particle clearance	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	positive regulation of fatty acid metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of MAP kinase activity	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of inflammatory response	stress response	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of granulocyte differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	cellular response to insulin stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of platelet-derived growth factor receptor signaling pathway	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	positive regulation of signal transduction	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	positive regulation of interleukin-8 production	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	regulation of glucose metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	positive regulation of glucose import	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of foam cell differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of tumor necrosis factor production	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of heterotypic cell-cell adhesion	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of heterotypic cell-cell adhesion	cell adhesion	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	response to glucose stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	positive regulation of protein kinase A signaling cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	response to tumor necrosis factor	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	positive regulation of protein amino acid phosphorylation	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of blood pressure	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	positive regulation of myeloid cell apoptosis	death	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of synaptic transmission	cell-cell signaling	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	fatty acid oxidation	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	positive regulation of cholesterol efflux	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of fat cell differentiation	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of gluconeogenesis	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of cell migration	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of low-density lipoprotein receptor biosynthetic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	brown fat cell differentiation	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of smooth muscle cell migration	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	glucose homeostasis	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	protein homooligomerization	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c11328	negative regulation of tumor necrosis factor-mediated signaling pathway	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipose most abundant gene transcript 1 protein) (apM-1)"
ruditapes_c4808	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes_c4808	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes_c22706	tRNA processing	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c22706	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c22706	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c22706	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c7006	cellular amino acid biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c7006	phosphorylation	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c7006	arginine biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c19915	protein transport	transport	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c19915	cell division	other biological processes	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c19915	protein folding	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c19915	cell cycle	cell cycle and proliferation	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c19915	protein peptidyl-prolyl isomerization	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c16985	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_c2642	terpenoid biosynthetic process	other metabolic processes	P	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) (MECPP-synthase) (MECPS) (EC 4.6.1.12)"
ruditapes_c2642	isoprenoid biosynthetic process	other metabolic processes	P	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) (MECPP-synthase) (MECPS) (EC 4.6.1.12)"
ruditapes2_c559	GTP catabolic process	other metabolic processes	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes2_c559	tRNA processing	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes2_c559	tRNA modification	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c31710	lipid metabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c31710	fatty acid metabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c31710	fatty acid beta-oxidation	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c31710	metabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c31710	oxidation reduction	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c31710	lipid catabolic process	other metabolic processes	P	Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase (EC 4.2.1.17) (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)]
ruditapes_c30390	menaquinone biosynthetic process	other metabolic processes	P	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (SEPHCHC synthase) (EC 2.2.1.9) (Menaquinone biosynthesis protein MenD)
ruditapes_c29916	ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c29916	transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c29916	potassium ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c19860	cellular amino acid biosynthetic process	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes_c19860	proline biosynthetic process	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes_c19860	phosphorylation	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes_c11221	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c11221	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c11221	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c11221	tRNA processing	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c9355	cellular defense response	stress response	P	SH2 domain-containing protein 1A
ruditapes_c9355	humoral immune response	other biological processes	P	SH2 domain-containing protein 1A
ruditapes_c9355	cell-cell signaling	cell-cell signaling	P	SH2 domain-containing protein 1A
ruditapes_c9355	positive regulation of natural killer cell mediated cytotoxicity	stress response	P	SH2 domain-containing protein 1A
ruditapes_c9355	positive regulation of natural killer cell mediated cytotoxicity	death	P	SH2 domain-containing protein 1A
ruditapes2_c220	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)
ruditapes_c857	protein folding	protein metabolism	P	T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)
ruditapes_c857	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)
ruditapes2_c481	protein folding	protein metabolism	P	T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)
ruditapes2_c220	protein folding	protein metabolism	P	T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)
ruditapes2_c481	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta)
ruditapes_c7217	transport	transport	P	Mitochondrial import inner membrane translocase subunit TIM14 (DnaJ homolog subfamily C member 19)
ruditapes_c7217	protein transport	transport	P	Mitochondrial import inner membrane translocase subunit TIM14 (DnaJ homolog subfamily C member 19)
ruditapes_c19986	translation	protein metabolism	P	"Threonine--tRNA ligase, cytoplasmic (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)"
ruditapes_c19986	tRNA aminoacylation for protein translation	protein metabolism	P	"Threonine--tRNA ligase, cytoplasmic (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)"
ruditapes_c19986	tRNA aminoacylation for protein translation	RNA metabolism	P	"Threonine--tRNA ligase, cytoplasmic (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)"
ruditapes_c19986	threonyl-tRNA aminoacylation	protein metabolism	P	"Threonine--tRNA ligase, cytoplasmic (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)"
ruditapes_c19986	threonyl-tRNA aminoacylation	RNA metabolism	P	"Threonine--tRNA ligase, cytoplasmic (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)"
ruditapes_c19986	tRNA aminoacylation	RNA metabolism	P	"Threonine--tRNA ligase, cytoplasmic (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)"
ruditapes_c10448	retinoid metabolic process	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc35788	positive regulation of blood pressure	other biological processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc35788	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c10448	positive regulation of blood pressure	other biological processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc35788	retinoid metabolic process	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc35788	ethanol oxidation	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc35788	response to lipopolysaccharide	other biological processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc35788	formaldehyde catabolic process	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c10448	formaldehyde catabolic process	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c10448	response to lipopolysaccharide	other biological processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c10448	respiratory system process	other biological processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c10448	ethanol oxidation	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc35788	peptidyl-cysteine S-nitrosylation	protein metabolism	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c10448	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc35788	respiratory system process	other biological processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c10448	peptidyl-cysteine S-nitrosylation	protein metabolism	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c10448	response to nitrosative stress	stress response	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c10448	response to redox state	other biological processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc35788	response to redox state	other biological processes	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_lrc35788	response to nitrosative stress	stress response	P	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase 5) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)
ruditapes_c28561	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of lipopolysaccharide-mediated signaling pathway	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	cell development	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of T cell cytokine production	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	bone resorption	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	protein polyubiquitination	protein metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	ossification	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	regulation of immunoglobulin secretion	transport	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	protein polyubiquitination	protein metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	bone resorption	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	protein ubiquitination	protein metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	protein K63-linked ubiquitination	protein metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	neural tube closure	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	neural tube closure	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	osteoclast differentiation	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	protein ubiquitination	protein metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	cell development	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of transcription factor activity	RNA metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	myeloid dendritic cell differentiation	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	response to interleukin-1	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	activation of protein kinase activity	other metabolic processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	ossification	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	I-kappaB kinase/NF-kappaB cascade	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	regulation of apoptosis	death	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of interleukin-12 biosynthetic process	other metabolic processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	T-helper 1 type immune response	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	immune response	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	T-helper 1 type immune response	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of osteoclast differentiation	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	myeloid dendritic cell differentiation	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of JUN kinase activity	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of JUN kinase activity	stress response	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of JUN kinase activity	protein metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of JUN kinase activity	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of JUN kinase activity	stress response	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of JUN kinase activity	protein metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	interleukin-1-mediated signaling pathway	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	protein autoubiquitination	protein metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of lipopolysaccharide-mediated signaling pathway	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	osteoclast differentiation	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	organ morphogenesis	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	protein K63-linked ubiquitination	protein metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	odontogenesis of dentine-containing tooth	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of interleukin-6 biosynthetic process	other metabolic processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	regulation of immunoglobulin secretion	transport	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of interleukin-6 biosynthetic process	other metabolic processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	signal transduction	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	interleukin-1-mediated signaling pathway	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of interleukin-2 production	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	antigen processing and presentation of exogenous peptide antigen via MHC class II	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of interleukin-12 biosynthetic process	other metabolic processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	T cell receptor signaling pathway	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	T cell receptor signaling pathway	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	signal transduction	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	activation of protein kinase activity	other metabolic processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	activation of NF-kappaB-inducing kinase activity	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	activation of NF-kappaB-inducing kinase activity	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of T cell proliferation	cell cycle and proliferation	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	bone remodeling	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	antigen processing and presentation of exogenous peptide antigen via MHC class II	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of T cell cytokine production	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of interleukin-2 production	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	regulation of apoptosis	death	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	I-kappaB kinase/NF-kappaB cascade	signal transduction	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	positive regulation of transcription factor activity	RNA metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	protein autoubiquitination	protein metabolism	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of T cell proliferation	cell cycle and proliferation	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	organ morphogenesis	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	bone remodeling	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	response to interleukin-1	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	positive regulation of osteoclast differentiation	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c28561	immune response	other biological processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_c8464	odontogenesis of dentine-containing tooth	developmental processes	P	TNF receptor-associated factor 6 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRAF6)
ruditapes_lrc34500	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4)
ruditapes_lrc34500	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4)
ruditapes_c8576	translation	protein metabolism	P	"50S ribosomal protein L16, chloroplastic"
ruditapes2_c2885	NAD biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes2_c2885	pyridine nucleotide biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes2_c2885	biosynthetic process	other metabolic processes	P	Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) diphosphorylase) (Deamido-NAD(+) pyrophosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase)
ruditapes_c29627	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c29627	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c29627	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c29627	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c17884	pyridoxal phosphate biosynthetic process	other metabolic processes	P	Pyridoxal biosynthesis lyase PdxS (EC 4.-.-.-)
ruditapes_c17884	metabolic process	other metabolic processes	P	Pyridoxal biosynthesis lyase PdxS (EC 4.-.-.-)
ruditapes_c36807	terpenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes_c36807	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes_c36807	metabolic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes_c36807	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes_c15153	metabolic process	other metabolic processes	P	Acidic endochitinase pcht28 (EC 3.2.1.14)
ruditapes_c15153	cell wall macromolecule catabolic process	other metabolic processes	P	Acidic endochitinase pcht28 (EC 3.2.1.14)
ruditapes_c15153	chitin catabolic process	other metabolic processes	P	Acidic endochitinase pcht28 (EC 3.2.1.14)
ruditapes_c15153	defense response	stress response	P	Acidic endochitinase pcht28 (EC 3.2.1.14)
ruditapes_c15153	carbohydrate metabolic process	other metabolic processes	P	Acidic endochitinase pcht28 (EC 3.2.1.14)
ruditapes_c15153	response to stress	stress response	P	Acidic endochitinase pcht28 (EC 3.2.1.14)
ruditapes_c15153	polysaccharide catabolic process	other metabolic processes	P	Acidic endochitinase pcht28 (EC 3.2.1.14)
ruditapes_c26485	ripening	developmental processes	P	Polygalacturonase-1 non-catalytic subunit beta (AroGP1) (Polygalacturonase converter) (PG converter)
ruditapes_c26485	cell wall organization	cell organization and biogenesis	P	Polygalacturonase-1 non-catalytic subunit beta (AroGP1) (Polygalacturonase converter) (PG converter)
ruditapes_c12860	biological_process	other biological processes	P	WD repeat-containing protein 93 (Protein MA0035)
ruditapes_c7494	oxidation reduction	other metabolic processes	P	"Violaxanthin de-epoxidase, chloroplastic (EC 1.10.99.3)"
ruditapes_c17639	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Phytochrome
ruditapes_c17639	detection of visible light	other biological processes	P	Phytochrome
ruditapes_c17639	peptidyl-histidine phosphorylation	protein metabolism	P	Phytochrome
ruditapes_c17639	response to stimulus	other biological processes	P	Phytochrome
ruditapes_c17639	protein-chromophore linkage	protein metabolism	P	Phytochrome
ruditapes_c17639	signal transduction	signal transduction	P	Phytochrome
ruditapes_c17639	"transcription, DNA-dependent"	RNA metabolism	P	Phytochrome
ruditapes_c17639	two-component signal transduction system (phosphorelay)	signal transduction	P	Phytochrome
ruditapes_c17639	"red, far-red light phototransduction"	other biological processes	P	Phytochrome
ruditapes_c17639	protein-tetrapyrrole linkage	protein metabolism	P	Phytochrome
ruditapes2_c1219	response to biotic stimulus	other biological processes	P	Major latex protein 22 (MLP 22) (gMLP22)
ruditapes2_c1219	defense response	stress response	P	Major latex protein 22 (MLP 22) (gMLP22)
ruditapes_c24422	transmembrane transport	transport	P	Sugar carrier protein C
ruditapes_c24422	transport	transport	P	Sugar carrier protein C
ruditapes_c24422	carbohydrate transport	transport	P	Sugar carrier protein C
ruditapes_c21963	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor 5 (gCDI-B1)
ruditapes_c21963	negative regulation of endopeptidase activity	other biological processes	P	Serine protease inhibitor 5 (gCDI-B1)
ruditapes_s40417	RNA metabolic process	RNA metabolism	P	Eukaryotic translation initiation factor isoform 4G-2 (eIF(iso)-4G-2) (eIF(iso)4G-2) (Eukaryotic initiation factor iso-4F subunit p82-16) (eIF-(iso)4F p82-16 subunit)
ruditapes_s40417	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor isoform 4G-2 (eIF(iso)-4G-2) (eIF(iso)4G-2) (Eukaryotic initiation factor iso-4F subunit p82-16) (eIF-(iso)4F p82-16 subunit)
ruditapes_c15123	transmembrane transport	transport	P	Nucleobase-ascorbate transporter LPE1 (Leaf permease protein 1)
ruditapes_c15123	transport	transport	P	Nucleobase-ascorbate transporter LPE1 (Leaf permease protein 1)
ruditapes_lrc34782	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s38508	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s38837	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33239	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32491	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4611	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4968	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc3270	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5383	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc36133	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33984	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc36133	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s38080	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5383	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5118	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4936	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc6525	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32636	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc35632	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4141	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4141	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32212	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4895	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc6525	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5462	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4999	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33984	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc3914	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc38349	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s38080	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33239	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32132	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5462	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc34782	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4936	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4968	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s34502	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4965	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc38349	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s38508	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32132	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5462	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4999	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32491	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s35192	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc34307	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s36309	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc34307	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc34215	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4936	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5383	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s38508	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33368	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32636	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc6423	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc36133	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s34502	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32212	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc7105	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32212	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33548	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33548	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc38349	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc34782	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32491	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc7105	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5357	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc3270	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4965	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s34502	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc7105	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s35192	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4120	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc35632	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s36309	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc3914	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33239	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc6525	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4311	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc34215	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4311	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc3270	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc6423	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc38362	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5423	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32132	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4895	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33368	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33368	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33984	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4895	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4340	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc34307	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4311	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc35632	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5423	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5423	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4141	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s36309	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4340	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4965	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5401	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4120	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc33548	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc34215	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc9695	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4611	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5401	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc38362	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5118	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc9695	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5357	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4968	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s38837	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc32636	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4120	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s35192	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc3914	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc38362	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4340	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4999	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5118	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5401	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc5357	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc4611	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes2_lrc6423	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s38837	defense response	stress response	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_lrc9695	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_s38080	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 3 (AtCYS-3)
ruditapes_c20747	translation	protein metabolism	P	Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) (Protein EMBRYO DEFECTIVE 1401)
ruditapes_c20747	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) (Protein EMBRYO DEFECTIVE 1401)
ruditapes2_lrc3224	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 8 (EC 2.7.11.1) (Calcium-dependent protein kinase isoform CDPK19) (AtCDPK19)
ruditapes2_lrc3224	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 8 (EC 2.7.11.1) (Calcium-dependent protein kinase isoform CDPK19) (AtCDPK19)
ruditapes_c2577	defense response to bacterium	stress response	P	Disease resistance protein RPS2 (Resistance to Pseudomonas syringae protein 2)
ruditapes_c2577	detection of bacterium	other biological processes	P	Disease resistance protein RPS2 (Resistance to Pseudomonas syringae protein 2)
ruditapes_c2577	plant-type hypersensitive response	stress response	P	Disease resistance protein RPS2 (Resistance to Pseudomonas syringae protein 2)
ruditapes_c2577	plant-type hypersensitive response	death	P	Disease resistance protein RPS2 (Resistance to Pseudomonas syringae protein 2)
ruditapes_c2577	defense response	stress response	P	Disease resistance protein RPS2 (Resistance to Pseudomonas syringae protein 2)
ruditapes_lrc20120	glutamate metabolic process	other metabolic processes	P	Glutamate decarboxylase 1 (GAD 1) (EC 4.1.1.15)
ruditapes_lrc20120	response to cadmium ion	other biological processes	P	Glutamate decarboxylase 1 (GAD 1) (EC 4.1.1.15)
ruditapes_lrc20120	carboxylic acid metabolic process	other metabolic processes	P	Glutamate decarboxylase 1 (GAD 1) (EC 4.1.1.15)
ruditapes_c9287	fatty acid biosynthetic process	other metabolic processes	P	"Oleoyl-acyl carrier protein thioesterase 1, chloroplastic (EC 3.1.2.14) (18:0-acyl-carrier protein thioesterase) (18:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase)"
ruditapes_c11399	defense response	stress response	P	Thionin-2.2 [Cleaved into: Thionin-2.2; Acidic protein]
ruditapes_c20404	spermine biosynthetic process	other metabolic processes	P	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]
ruditapes_c20404	spermidine biosynthetic process	other metabolic processes	P	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]
ruditapes_c20404	polyamine biosynthetic process	other metabolic processes	P	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]
ruditapes2_lrc3058	defense response to bacterium	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes2_lrc3058	embryonic development ending in seed dormancy	developmental processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes2_lrc3058	response to salt stress	stress response	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes2_lrc3058	oxidation reduction	other metabolic processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes2_lrc3058	response to zinc ion	other biological processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes2_lrc3058	superoxide metabolic process	other metabolic processes	P	"Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)"
ruditapes_c24370	cell wall modification	cell organization and biogenesis	P	Pectinesterase/pectinesterase inhibitor PPE8B [Includes: Pectinesterase inhibitor PPE8B (Pectin methylesterase inhibitor PPE8B); Pectinesterase PPE8B (PE PPE8B) (EC 3.1.1.11) (Pectin methylesterase PPE8B)]
ruditapes_c24370	cell wall organization	cell organization and biogenesis	P	Pectinesterase/pectinesterase inhibitor PPE8B [Includes: Pectinesterase inhibitor PPE8B (Pectin methylesterase inhibitor PPE8B); Pectinesterase PPE8B (PE PPE8B) (EC 3.1.1.11) (Pectin methylesterase PPE8B)]
ruditapes_c24370	negative regulation of catalytic activity	other biological processes	P	Pectinesterase/pectinesterase inhibitor PPE8B [Includes: Pectinesterase inhibitor PPE8B (Pectin methylesterase inhibitor PPE8B); Pectinesterase PPE8B (PE PPE8B) (EC 3.1.1.11) (Pectin methylesterase PPE8B)]
ruditapes_c26693	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	"Aspartate carbamoyltransferase 1, chloroplastic (EC 2.1.3.2) (Aspartate transcarbamylase 1) (ATCase 1)"
ruditapes_c26693	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	"Aspartate carbamoyltransferase 1, chloroplastic (EC 2.1.3.2) (Aspartate transcarbamylase 1) (ATCase 1)"
ruditapes_c26693	metabolic process	other metabolic processes	P	"Aspartate carbamoyltransferase 1, chloroplastic (EC 2.1.3.2) (Aspartate transcarbamylase 1) (ATCase 1)"
ruditapes_c26693	cellular amino acid metabolic process	other metabolic processes	P	"Aspartate carbamoyltransferase 1, chloroplastic (EC 2.1.3.2) (Aspartate transcarbamylase 1) (ATCase 1)"
ruditapes_c23767	phosphatidylglycerol biosynthetic process	other metabolic processes	P	"Glycerol-3-phosphate acyltransferase, chloroplastic (GPAT) (EC 2.3.1.15)"
ruditapes_c23767	metabolic process	other metabolic processes	P	"Glycerol-3-phosphate acyltransferase, chloroplastic (GPAT) (EC 2.3.1.15)"
ruditapes_c23767	phospholipid biosynthetic process	other metabolic processes	P	"Glycerol-3-phosphate acyltransferase, chloroplastic (GPAT) (EC 2.3.1.15)"
ruditapes_c26891	ethylene biosynthetic process	other metabolic processes	P	1-aminocyclopropane-1-carboxylate synthase 4 (ACC synthase 4) (EC 4.4.1.14) (S-adenosyl-L-methionine methylthioadenosine-lyase 4)
ruditapes_c26891	ripening	developmental processes	P	1-aminocyclopropane-1-carboxylate synthase 4 (ACC synthase 4) (EC 4.4.1.14) (S-adenosyl-L-methionine methylthioadenosine-lyase 4)
ruditapes_c26891	biosynthetic process	other metabolic processes	P	1-aminocyclopropane-1-carboxylate synthase 4 (ACC synthase 4) (EC 4.4.1.14) (S-adenosyl-L-methionine methylthioadenosine-lyase 4)
ruditapes_c26891	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	1-aminocyclopropane-1-carboxylate synthase 4 (ACC synthase 4) (EC 4.4.1.14) (S-adenosyl-L-methionine methylthioadenosine-lyase 4)
ruditapes_c26286	metabolic process	other metabolic processes	P	"Acid beta-fructofuranosidase 3, vacuolar (At beta fruct3) (AtBETAFRUCT3) (EC 3.2.1.26) (Acid invertase 3) (AI 3) (Acid sucrose hydrolase 3) (Vacuolar invertase 3) (Inv-V3) (VAC-INV 3) (VI 3)"
ruditapes_c26286	carbohydrate metabolic process	other metabolic processes	P	"Acid beta-fructofuranosidase 3, vacuolar (At beta fruct3) (AtBETAFRUCT3) (EC 3.2.1.26) (Acid invertase 3) (AI 3) (Acid sucrose hydrolase 3) (Vacuolar invertase 3) (Inv-V3) (VAC-INV 3) (VI 3)"
ruditapes_c15507	negative regulation of peptidase activity	other biological processes	P	Proteinase inhibitor type-2 CEVI57 (Proteinase inhibitor type II CEVI57)
ruditapes_c22761	carotenoid biosynthetic process	other metabolic processes	P	"Lycopene beta cyclase, chloroplastic (EC 5.5.1.19)"
ruditapes_lrc32083	multicellular organismal development	developmental processes	P	Repetitive proline-rich cell wall protein 1
ruditapes_c24404	defense response	stress response	P	Arcelin-4
ruditapes_c20354	defense response	stress response	P	Arcelin-4
ruditapes_c17031	metabolic process	other metabolic processes	P	(+)-delta-cadinene synthase isozyme A (D-cadinene synthase A) (EC 4.2.3.13)
ruditapes_c6967	oxidation reduction	other metabolic processes	P	Peroxidase 57 (Atperox P57) (EC 1.11.1.7) (ATP13a) (PRXR10)
ruditapes_c6967	response to oxidative stress	stress response	P	Peroxidase 57 (Atperox P57) (EC 1.11.1.7) (ATP13a) (PRXR10)
ruditapes_c6967	hydrogen peroxide catabolic process	stress response	P	Peroxidase 57 (Atperox P57) (EC 1.11.1.7) (ATP13a) (PRXR10)
ruditapes_c6967	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidase 57 (Atperox P57) (EC 1.11.1.7) (ATP13a) (PRXR10)
ruditapes_c12020	rhythmic process	other biological processes	P	Peroxidase 50 (Atperox P50) (EC 1.11.1.7) (ATP9a) (PRXR2)
ruditapes_c12020	response to oxidative stress	stress response	P	Peroxidase 50 (Atperox P50) (EC 1.11.1.7) (ATP9a) (PRXR2)
ruditapes_c12020	oxidation reduction	other metabolic processes	P	Peroxidase 50 (Atperox P50) (EC 1.11.1.7) (ATP9a) (PRXR2)
ruditapes_c12020	hydrogen peroxide catabolic process	stress response	P	Peroxidase 50 (Atperox P50) (EC 1.11.1.7) (ATP9a) (PRXR2)
ruditapes_c12020	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidase 50 (Atperox P50) (EC 1.11.1.7) (ATP9a) (PRXR2)
ruditapes_c13764	glucan biosynthetic process	other metabolic processes	P	"Granule-bound starch synthase 2, chloroplastic/amyloplastic (EC 2.4.1.21) (Granule-bound starch synthase II) (GBSS-II) (SS II)"
ruditapes_c13764	starch biosynthetic process	other metabolic processes	P	"Granule-bound starch synthase 2, chloroplastic/amyloplastic (EC 2.4.1.21) (Granule-bound starch synthase II) (GBSS-II) (SS II)"
ruditapes_c13764	biosynthetic process	other metabolic processes	P	"Granule-bound starch synthase 2, chloroplastic/amyloplastic (EC 2.4.1.21) (Granule-bound starch synthase II) (GBSS-II) (SS II)"
ruditapes2_c3338	carbohydrate utilization	other biological processes	P	Levansucrase (EC 2.4.1.10) (Beta-D-fructofuranosyl transferase) (Sucrose 6-fructosyl transferase)
ruditapes_c18093	signal transduction	signal transduction	P	Chemotaxis protein CheA (EC 2.7.13.3)
ruditapes_c18093	cell motion	other biological processes	P	Chemotaxis protein CheA (EC 2.7.13.3)
ruditapes_c18093	chemotaxis	other biological processes	P	Chemotaxis protein CheA (EC 2.7.13.3)
ruditapes_c18093	phosphorylation	other metabolic processes	P	Chemotaxis protein CheA (EC 2.7.13.3)
ruditapes_c18093	two-component signal transduction system (phosphorelay)	signal transduction	P	Chemotaxis protein CheA (EC 2.7.13.3)
ruditapes_c18093	peptidyl-histidine phosphorylation	protein metabolism	P	Chemotaxis protein CheA (EC 2.7.13.3)
ruditapes_c14584	protein transport	transport	P	Flagellar biosynthetic protein FliR
ruditapes_c14584	protein targeting	transport	P	Flagellar biosynthetic protein FliR
ruditapes_c16730	DNA replication	DNA metabolism	P	Primosomal protein N' (EC 3.6.4.-) (ATP-dependent helicase PriA) (Replication factor Y)
ruditapes_c16730	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	Primosomal protein N' (EC 3.6.4.-) (ATP-dependent helicase PriA) (Replication factor Y)
ruditapes_c16730	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	Primosomal protein N' (EC 3.6.4.-) (ATP-dependent helicase PriA) (Replication factor Y)
ruditapes_c9651	ion transport	transport	P	Amino-acid carrier protein AlsT
ruditapes_c9651	amino acid transport	transport	P	Amino-acid carrier protein AlsT
ruditapes_c9651	sodium ion transport	transport	P	Amino-acid carrier protein AlsT
ruditapes_c9651	transport	transport	P	Amino-acid carrier protein AlsT
ruditapes_c28278	amino sugar catabolic process	other metabolic processes	P	N-acetylmuramic acid 6-phosphate etherase (MurNAc-6-P etherase) (EC 4.2.1.126) (N-acetylmuramic acid 6-phosphate hydrolase) (N-acetylmuramic acid 6-phosphate lyase)
ruditapes_c28278	carbohydrate metabolic process	other metabolic processes	P	N-acetylmuramic acid 6-phosphate etherase (MurNAc-6-P etherase) (EC 4.2.1.126) (N-acetylmuramic acid 6-phosphate hydrolase) (N-acetylmuramic acid 6-phosphate lyase)
ruditapes_c12892	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c12892	nucleoside metabolic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes2_c5242	apoptosis	death	P	Bcl-2-like protein 2 (Bcl2-L-2) (Apoptosis regulator Bcl-W)
ruditapes2_c1129	regulation of apoptosis	death	P	Bcl-2-like protein 2 (Bcl2-L-2) (Apoptosis regulator Bcl-W)
ruditapes2_c5242	regulation of apoptosis	death	P	Bcl-2-like protein 2 (Bcl2-L-2) (Apoptosis regulator Bcl-W)
ruditapes2_c1129	apoptosis	death	P	Bcl-2-like protein 2 (Bcl2-L-2) (Apoptosis regulator Bcl-W)
ruditapes_c15321	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Poly [ADP-ribose] polymerase 15 (PARP-15) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 7) (ARTD7) (B-aggressive lymphoma protein 3)
ruditapes_c15321	"transcription, DNA-dependent"	RNA metabolism	P	Poly [ADP-ribose] polymerase 15 (PARP-15) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 7) (ARTD7) (B-aggressive lymphoma protein 3)
ruditapes_c930	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Poly [ADP-ribose] polymerase 15 (PARP-15) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 7) (ARTD7) (B-aggressive lymphoma protein 3)
ruditapes_c930	"transcription, DNA-dependent"	RNA metabolism	P	Poly [ADP-ribose] polymerase 15 (PARP-15) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 7) (ARTD7) (B-aggressive lymphoma protein 3)
ruditapes2_c2361	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Poly [ADP-ribose] polymerase 14 (PARP-14) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 8) (ARTD8) (B aggressive lymphoma protein 2)
ruditapes2_c2849	"transcription, DNA-dependent"	RNA metabolism	P	Poly [ADP-ribose] polymerase 14 (PARP-14) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 8) (ARTD8) (B aggressive lymphoma protein 2)
ruditapes2_c2361	"transcription, DNA-dependent"	RNA metabolism	P	Poly [ADP-ribose] polymerase 14 (PARP-14) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 8) (ARTD8) (B aggressive lymphoma protein 2)
ruditapes2_c2849	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Poly [ADP-ribose] polymerase 14 (PARP-14) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 8) (ARTD8) (B aggressive lymphoma protein 2)
ruditapes_c30460	"transcription, DNA-dependent"	RNA metabolism	P	Poly [ADP-ribose] polymerase 14 (PARP-14) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 8) (ARTD8) (B aggressive lymphoma protein 2)
ruditapes_c30460	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Poly [ADP-ribose] polymerase 14 (PARP-14) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 8) (ARTD8) (B aggressive lymphoma protein 2)
ruditapes_c11427	proteolysis	protein metabolism	P	Protein HypA
ruditapes_c30823	proteolysis	protein metabolism	P	Protein HypA
ruditapes_c30661	metabolic process	other metabolic processes	P	Histidinol dehydrogenase (HDH) (EC 1.1.1.23)
ruditapes_c30661	oxidation reduction	other metabolic processes	P	Histidinol dehydrogenase (HDH) (EC 1.1.1.23)
ruditapes_c30661	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol dehydrogenase (HDH) (EC 1.1.1.23)
ruditapes_c30661	histidine biosynthetic process	other metabolic processes	P	Histidinol dehydrogenase (HDH) (EC 1.1.1.23)
ruditapes_c11676	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c11676	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c11676	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c25564	purine nucleotide biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] subunit B (EC 6.3.5.2) (GMP synthetase)
ruditapes_c25564	asparagine biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] subunit B (EC 6.3.5.2) (GMP synthetase)
ruditapes_c25564	GMP biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] subunit B (EC 6.3.5.2) (GMP synthetase)
ruditapes_lrc18082	tRNA processing	RNA metabolism	P	Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase (EC 2.1.1.-)
ruditapes_lrc18082	methylation	other metabolic processes	P	Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase (EC 2.1.1.-)
ruditapes_lrc18082	rRNA processing	RNA metabolism	P	Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase (EC 2.1.1.-)
ruditapes_c18040	translation	protein metabolism	P	50S ribosomal protein L11P
ruditapes_c9740	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c9740	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c9740	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c9740	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc19188	protein stabilization	protein metabolism	P	Photosystem II reaction center protein H (PSII-H)
ruditapes_lrc19188	photosynthesis	other metabolic processes	P	Photosystem II reaction center protein H (PSII-H)
ruditapes_c21102	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutS
ruditapes_c21102	DNA repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c21102	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c21102	mismatch repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c21102	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c11928	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (Acyl-PO4 G3P acyltransferase) (Acyl-phosphate--glycerol-3-phosphate acyltransferase) (G3P acyltransferase) (GPAT) (EC 2.3.1.n3) (Lysophosphatidic acid synthase) (LPA synthase)
ruditapes_c13422	tryptophan biosynthetic process	other metabolic processes	P	Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48)
ruditapes_c13422	tryptophan metabolic process	other metabolic processes	P	Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48)
ruditapes_c13422	metabolic process	other metabolic processes	P	Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48)
ruditapes_c13422	aromatic amino acid family biosynthetic process	other metabolic processes	P	Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48)
ruditapes_c13422	cellular amino acid biosynthetic process	other metabolic processes	P	Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48)
ruditapes_s33245	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_s33245	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_s33245	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_s33245	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_s33245	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c19003	butyrate metabolic process	other metabolic processes	P	D-(-)-3-hydroxybutyrate oligomer hydrolase (3HB-oligomer hydrolase) (3HBOH) (EC 3.1.1.22)
ruditapes_c4827	transmembrane transport	transport	P	Probable 3-phenylpropionic acid transporter
ruditapes_c4827	transport	transport	P	Probable 3-phenylpropionic acid transporter
ruditapes_c13550	valyl-tRNA aminoacylation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13550	valyl-tRNA aminoacylation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13550	translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13550	tRNA aminoacylation for protein translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13550	tRNA aminoacylation for protein translation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c4597	nitrogen compound metabolic process	other metabolic processes	P	UPF0012 hydrolase YafV (EC 3.5.-.-)
ruditapes_c2717	nitrogen compound metabolic process	other metabolic processes	P	UPF0012 hydrolase YafV (EC 3.5.-.-)
ruditapes_c20544	coenzyme A biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes_c20544	biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes2_c779	oxidation reduction	other metabolic processes	P	Tryptophan 2-monooxygenase (EC 1.13.12.3)
ruditapes2_c779	auxin biosynthetic process	other metabolic processes	P	Tryptophan 2-monooxygenase (EC 1.13.12.3)
ruditapes_c20046	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase 2 (EC 1.1.1.85) (3-IPM-DH 2) (Beta-IPM dehydrogenase 2) (IMDH 2)
ruditapes_c20046	oxidation reduction	other metabolic processes	P	3-isopropylmalate dehydrogenase 2 (EC 1.1.1.85) (3-IPM-DH 2) (Beta-IPM dehydrogenase 2) (IMDH 2)
ruditapes_c20046	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase 2 (EC 1.1.1.85) (3-IPM-DH 2) (Beta-IPM dehydrogenase 2) (IMDH 2)
ruditapes_c20046	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase 2 (EC 1.1.1.85) (3-IPM-DH 2) (Beta-IPM dehydrogenase 2) (IMDH 2)
ruditapes2_c1938	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes2_c1938	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17)
ruditapes_c10450	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c10450	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c10450	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c10450	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c12431	cell division	other biological processes	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c12431	protein transport	transport	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c12431	protein peptidyl-prolyl isomerization	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c12431	cell cycle	cell cycle and proliferation	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c12431	protein folding	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c27479	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c27479	diaminopimelate biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c27479	lysine biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c27479	metabolic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c27479	cellular amino acid biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c31102	regulation of pH	other biological processes	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes_c31102	sodium ion transport	transport	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes_c31102	transport	transport	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes_c31102	ion transport	transport	P	Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA)
ruditapes_lrc34519	cell cycle	cell cycle and proliferation	P	Cell division topological specificity factor
ruditapes_lrc34519	cell division	other biological processes	P	Cell division topological specificity factor
ruditapes_lrc34519	regulation of barrier septum formation	cell organization and biogenesis	P	Cell division topological specificity factor
ruditapes_c25568	translation	protein metabolism	P	50S ribosomal protein L6
ruditapes_c23461	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c23461	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c23461	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c23461	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c23461	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_s36422	translation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_s36422	tRNA aminoacylation for protein translation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_s36422	tRNA aminoacylation for protein translation	RNA metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_s36422	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_s36422	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_s38933	ribosome biogenesis	other biological processes	P	GTPase Der (GTP-binding protein EngA)
ruditapes_s38933	biological_process	other biological processes	P	GTPase Der (GTP-binding protein EngA)
ruditapes_c306	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c306	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c306	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c306	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c28618	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c28618	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c28618	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c28618	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c28618	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c28618	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c24283	ion transport	transport	P	Outer membrane protein P2 (OMP P2)
ruditapes_c24283	transport	transport	P	Outer membrane protein P2 (OMP P2)
ruditapes_c15698	phosphorylation	other metabolic processes	P	Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase)
ruditapes_c15698	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase)
ruditapes_c2972	benzene and derivative metabolic process	other metabolic processes	P	4-hydroxyphenylacetate 3-monooxygenase reductase component (EC 1.5.1.36) (4-HPA 3-monooxygenase small component) (Flavin:NADH reductase)
ruditapes_c2972	oxidation reduction	other metabolic processes	P	4-hydroxyphenylacetate 3-monooxygenase reductase component (EC 1.5.1.36) (4-HPA 3-monooxygenase small component) (Flavin:NADH reductase)
ruditapes_c2972	aromatic compound catabolic process	other metabolic processes	P	4-hydroxyphenylacetate 3-monooxygenase reductase component (EC 1.5.1.36) (4-HPA 3-monooxygenase small component) (Flavin:NADH reductase)
ruditapes_c1748	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes2_c1426	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes_c1748	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes_c1748	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes2_c1426	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes2_c1426	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase G (EC 2.1.1.174) (23S rRNA m2G1835 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase RlmG)
ruditapes_c15858	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c15858	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c15858	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c18871	DNA repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c18871	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c18871	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutL
ruditapes_c18871	mismatch repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c18871	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c7403	thiamin biosynthetic process	other metabolic processes	P	Phosphomethylpyrimidine synthase (EC 4.1.99.17) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
ruditapes_c10178	cell division	other biological processes	P	Tyrosine recombinase XerC
ruditapes_c10178	DNA recombination	DNA metabolism	P	Tyrosine recombinase XerC
ruditapes_c10178	cell cycle	cell cycle and proliferation	P	Tyrosine recombinase XerC
ruditapes_c10178	chromosome segregation	other biological processes	P	Tyrosine recombinase XerC
ruditapes_c10178	DNA integration	DNA metabolism	P	Tyrosine recombinase XerC
ruditapes_c27366	antibiotic biosynthetic process	other metabolic processes	P	Acyl-homoserine lactone acylase PvdQ (AHL acylase PvdQ) (Acyl-HSL acylase PvdQ) (EC 3.5.1.97) [Cleaved into: Acyl-homoserine lactone acylase PvdQ subunit alpha (Acyl-HSL acylase PvdQ subunit alpha); Acyl-homoserine lactone acylase PvdQ subunit beta (Acyl-HSL acylase PvdQ subunit beta)]
ruditapes_c27366	quorum sensing	other biological processes	P	Acyl-homoserine lactone acylase PvdQ (AHL acylase PvdQ) (Acyl-HSL acylase PvdQ) (EC 3.5.1.97) [Cleaved into: Acyl-homoserine lactone acylase PvdQ subunit alpha (Acyl-HSL acylase PvdQ subunit alpha); Acyl-homoserine lactone acylase PvdQ subunit beta (Acyl-HSL acylase PvdQ subunit beta)]
ruditapes_lrc10623	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_c25100	barrier septum formation	cell organization and biogenesis	P	Probable GTP-binding protein EngB
ruditapes_c25100	cell division	other biological processes	P	Probable GTP-binding protein EngB
ruditapes_c25100	cell cycle	cell cycle and proliferation	P	Probable GTP-binding protein EngB
ruditapes2_c2128	magnesium ion transport	transport	P	Magnesium transport protein CorA
ruditapes2_c2128	cobalt ion transport	transport	P	Magnesium transport protein CorA
ruditapes2_c2128	metal ion transport	transport	P	Magnesium transport protein CorA
ruditapes2_c2128	transport	transport	P	Magnesium transport protein CorA
ruditapes2_c2128	transmembrane transport	transport	P	Magnesium transport protein CorA
ruditapes2_c2128	ion transport	transport	P	Magnesium transport protein CorA
ruditapes_c22830	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c22830	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes2_c159	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes2_c159	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes2_c159	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes2_c159	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes2_c159	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes2_c5646	purine nucleotide biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes2_c5646	GMP biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes2_c5646	glutamine metabolic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c4776	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c4776	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c4776	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c4776	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c29535	transmembrane transport	transport	P	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.-)
ruditapes_c29535	transport	transport	P	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.-)
ruditapes_c29535	ATP catabolic process	other metabolic processes	P	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.-)
ruditapes_c29535	lipid transport	transport	P	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.-)
ruditapes_c1299	protein lipoylation	protein metabolism	P	Lipoate-protein ligase A (EC 2.7.7.63) (Lipoate--protein ligase)
ruditapes_c1299	peptidyl-lysine lipoylation	protein metabolism	P	Lipoate-protein ligase A (EC 2.7.7.63) (Lipoate--protein ligase)
ruditapes_c1299	protein modification process	protein metabolism	P	Lipoate-protein ligase A (EC 2.7.7.63) (Lipoate--protein ligase)
ruditapes_lrc40300	tRNA processing	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_lrc40300	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_lrc40300	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_lrc40300	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c16716	protein transport	transport	P	Protein TolB
ruditapes_c16716	protein import	transport	P	Protein TolB
ruditapes_c16716	transport	transport	P	Protein TolB
ruditapes_c3178	translational elongation	protein metabolism	P	Elongation factor Ts (EF-Ts)
ruditapes_c3178	translation	protein metabolism	P	Elongation factor Ts (EF-Ts)
ruditapes_c9987	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c14345	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c14345	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c11710	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c11710	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c11710	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c11710	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c9987	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c9987	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c9987	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c14345	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c14345	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c19336	maintenance of stationary phase	other biological processes	P	Chaperone SurA (Peptidyl-prolyl cis-trans isomerase SurA) (PPIase SurA) (EC 5.2.1.8) (Rotamase SurA)
ruditapes_c19336	biofilm formation	other biological processes	P	Chaperone SurA (Peptidyl-prolyl cis-trans isomerase SurA) (PPIase SurA) (EC 5.2.1.8) (Rotamase SurA)
ruditapes_c19336	protein stabilization	protein metabolism	P	Chaperone SurA (Peptidyl-prolyl cis-trans isomerase SurA) (PPIase SurA) (EC 5.2.1.8) (Rotamase SurA)
ruditapes_c19336	cell outer membrane assembly	cell organization and biogenesis	P	Chaperone SurA (Peptidyl-prolyl cis-trans isomerase SurA) (PPIase SurA) (EC 5.2.1.8) (Rotamase SurA)
ruditapes_c19336	protein transport	transport	P	Chaperone SurA (Peptidyl-prolyl cis-trans isomerase SurA) (PPIase SurA) (EC 5.2.1.8) (Rotamase SurA)
ruditapes_c19336	protein folding	protein metabolism	P	Chaperone SurA (Peptidyl-prolyl cis-trans isomerase SurA) (PPIase SurA) (EC 5.2.1.8) (Rotamase SurA)
ruditapes_c19336	protein peptidyl-prolyl isomerization	protein metabolism	P	Chaperone SurA (Peptidyl-prolyl cis-trans isomerase SurA) (PPIase SurA) (EC 5.2.1.8) (Rotamase SurA)
ruditapes_c19336	chaperone mediated protein folding requiring cofactor	protein metabolism	P	Chaperone SurA (Peptidyl-prolyl cis-trans isomerase SurA) (PPIase SurA) (EC 5.2.1.8) (Rotamase SurA)
ruditapes2_c296	"cytoadherence to microvasculature, mediated by parasite protein"	other biological processes	P	Protein P200
ruditapes_c9801	phospholipid biosynthetic process	other metabolic processes	P	Putative phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-DAG synthase) (CDP-DG synthase) (CDP-diacylglycerol synthase) (CDS) (CDP-diglyceride pyrophosphorylase) (CDP-diglyceride synthase) (CTP:phosphatidate cytidylyltransferase)
ruditapes_c28587	inner ear receptor cell differentiation	developmental processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes2_c288	inner ear receptor cell differentiation	developmental processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_c28587	sensory perception of sound	other biological processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_c28587	photoreceptor cell maintenance	other biological processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_c28587	equilibrioception	other biological processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes2_c288	inner ear morphogenesis	developmental processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_c28587	inner ear morphogenesis	developmental processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_c28587	sensory perception of light stimulus	other biological processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes2_c288	sensory perception of sound	other biological processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes2_c288	photoreceptor cell maintenance	other biological processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes2_c288	sensory perception of light stimulus	other biological processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes2_c288	equilibrioception	other biological processes	P	Usher syndrome type-1G protein (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_lrc30046	mitotic sister chromatid cohesion	cell cycle and proliferation	P	Sister chromatid cohesion protein PDS5 homolog B-A (Androgen-induced proliferation inhibitor A)
ruditapes_lrc30046	mitotic sister chromatid cohesion	cell organization and biogenesis	P	Sister chromatid cohesion protein PDS5 homolog B-A (Androgen-induced proliferation inhibitor A)
ruditapes_lrc30046	mitosis	cell cycle and proliferation	P	Sister chromatid cohesion protein PDS5 homolog B-A (Androgen-induced proliferation inhibitor A)
ruditapes_lrc30046	mitosis	cell organization and biogenesis	P	Sister chromatid cohesion protein PDS5 homolog B-A (Androgen-induced proliferation inhibitor A)
ruditapes_lrc30046	cell cycle	cell cycle and proliferation	P	Sister chromatid cohesion protein PDS5 homolog B-A (Androgen-induced proliferation inhibitor A)
ruditapes_lrc30046	cell division	other biological processes	P	Sister chromatid cohesion protein PDS5 homolog B-A (Androgen-induced proliferation inhibitor A)
ruditapes_lrc30046	negative regulation of cell proliferation	cell cycle and proliferation	P	Sister chromatid cohesion protein PDS5 homolog B-A (Androgen-induced proliferation inhibitor A)
ruditapes_c26599	biological_process	other biological processes	P	"28S ribosomal protein S35, mitochondrial (MRP-S35) (S35mt)"
ruditapes_c9116	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Cryptochrome-2
ruditapes_c9116	DNA repair	stress response	P	Cryptochrome-2
ruditapes_c9116	DNA repair	DNA metabolism	P	Cryptochrome-2
ruditapes_c9116	"transcription, DNA-dependent"	RNA metabolism	P	Cryptochrome-2
ruditapes_c9116	blue light signaling pathway	signal transduction	P	Cryptochrome-2
ruditapes_c9116	regulation of circadian rhythm	other biological processes	P	Cryptochrome-2
ruditapes_c9116	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cryptochrome-2
ruditapes_c9116	protein-chromophore linkage	protein metabolism	P	Cryptochrome-2
ruditapes_c9116	protein import into nucleus	transport	P	Cryptochrome-2
ruditapes_c9116	response to stimulus	other biological processes	P	Cryptochrome-2
ruditapes_c9116	photoreactive repair	stress response	P	Cryptochrome-2
ruditapes_c9116	photoreactive repair	DNA metabolism	P	Cryptochrome-2
ruditapes_c9116	circadian rhythm	other biological processes	P	Cryptochrome-2
ruditapes_c9116	rhythmic process	other biological processes	P	Cryptochrome-2
ruditapes_lrc14066	inflammatory response	stress response	P	C-type lectin domain family 7 member A (Dendritic cell-associated C-type lectin 1) (DC-associated C-type lectin 1) (Dectin-1)
ruditapes_lrc14066	innate immune response	stress response	P	C-type lectin domain family 7 member A (Dendritic cell-associated C-type lectin 1) (DC-associated C-type lectin 1) (Dectin-1)
ruditapes_c26257	inflammatory response	stress response	P	C-type lectin domain family 7 member A (Dendritic cell-associated C-type lectin 1) (DC-associated C-type lectin 1) (Dectin-1)
ruditapes_c26257	innate immune response	stress response	P	C-type lectin domain family 7 member A (Dendritic cell-associated C-type lectin 1) (DC-associated C-type lectin 1) (Dectin-1)
ruditapes_c25983	phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-kinase beta (PI4K-beta) (PI4Kbeta) (PtdIns 4-kinase beta) (EC 2.7.1.67)
ruditapes_c25983	phosphoinositide-mediated signaling	signal transduction	P	Phosphatidylinositol 4-kinase beta (PI4K-beta) (PI4Kbeta) (PtdIns 4-kinase beta) (EC 2.7.1.67)
ruditapes_c25983	phosphoinositide phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-kinase beta (PI4K-beta) (PI4Kbeta) (PtdIns 4-kinase beta) (EC 2.7.1.67)
ruditapes_c24111	translation	protein metabolism	P	"50S ribosomal protein L20, chloroplastic"
ruditapes_c1031	GMP biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c1031	glutamine metabolic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c1031	purine nucleotide biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c1031	tRNA processing	RNA metabolism	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c10395	translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c10395	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c10395	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c10395	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c10395	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c10395	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c16894	cellular amino acid biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c16894	tryptophan biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c16894	aromatic amino acid family biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c16894	metabolic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c8783	tricarboxylic acid cycle	other metabolic processes	P	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (2-oxoglutarate dehydrogenase complex component E2) (OGDC-E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex)
ruditapes_c8783	metabolic process	other metabolic processes	P	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (2-oxoglutarate dehydrogenase complex component E2) (OGDC-E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex)
ruditapes_c10490	DNA recombination	DNA metabolism	P	Probable ATP-dependent helicase DinG homolog (EC 3.6.4.12)
ruditapes_c10490	response to DNA damage stimulus	stress response	P	Probable ATP-dependent helicase DinG homolog (EC 3.6.4.12)
ruditapes_c10490	DNA replication	DNA metabolism	P	Probable ATP-dependent helicase DinG homolog (EC 3.6.4.12)
ruditapes_c10490	DNA repair	stress response	P	Probable ATP-dependent helicase DinG homolog (EC 3.6.4.12)
ruditapes_c10490	DNA repair	DNA metabolism	P	Probable ATP-dependent helicase DinG homolog (EC 3.6.4.12)
ruditapes_c10490	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Probable ATP-dependent helicase DinG homolog (EC 3.6.4.12)
ruditapes_lrc25145	lipid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)
ruditapes_lrc25145	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 6.4.1.2)
ruditapes_c24362	translation	protein metabolism	P	Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.-)
ruditapes2_c549	proline transport	transport	P	Sodium/proline symporter 2 (Proline permease 2)
ruditapes2_c549	amino acid transport	transport	P	Sodium/proline symporter 2 (Proline permease 2)
ruditapes2_c549	transmembrane transport	transport	P	Sodium/proline symporter 2 (Proline permease 2)
ruditapes2_c549	transport	transport	P	Sodium/proline symporter 2 (Proline permease 2)
ruditapes2_c549	ion transport	transport	P	Sodium/proline symporter 2 (Proline permease 2)
ruditapes2_c549	sodium ion transport	transport	P	Sodium/proline symporter 2 (Proline permease 2)
ruditapes_c9461	two-component signal transduction system (phosphorelay)	signal transduction	P	Sensory transduction protein LytR
ruditapes_c24743	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Sensory transduction protein LytR
ruditapes_c9461	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Sensory transduction protein LytR
ruditapes_c24743	"transcription, DNA-dependent"	RNA metabolism	P	Sensory transduction protein LytR
ruditapes_c24743	two-component signal transduction system (phosphorelay)	signal transduction	P	Sensory transduction protein LytR
ruditapes_c9461	"transcription, DNA-dependent"	RNA metabolism	P	Sensory transduction protein LytR
ruditapes_c1891	oxidation reduction	other metabolic processes	P	Putative NAD(P)H nitroreductase SSP0379 (EC 1.-.-.-)
ruditapes_c24046	biosynthetic process	other metabolic processes	P	Histidine ammonia-lyase (Histidase) (EC 4.3.1.3)
ruditapes_c24046	histidine metabolic process	other metabolic processes	P	Histidine ammonia-lyase (Histidase) (EC 4.3.1.3)
ruditapes_c24046	histidine catabolic process	other metabolic processes	P	Histidine ammonia-lyase (Histidase) (EC 4.3.1.3)
ruditapes_c12361	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c12361	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c12361	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c12361	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c26982	translation	protein metabolism	P	50S ribosomal protein L21
ruditapes_c12793	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_c12793	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_c12793	translation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_c12793	tRNA aminoacylation for protein translation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_c12793	tRNA aminoacylation for protein translation	RNA metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_c21693	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c21693	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c21693	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c21693	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c21693	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c21693	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c13739	ion transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c13739	proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c13739	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c13739	ATP hydrolysis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c13739	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c13739	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c13739	transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c13739	ATP metabolic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c24311	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes_c21872	translation	protein metabolism	P	Peptide chain release factor 1 (RF-1)
ruditapes_c21872	translational termination	protein metabolism	P	Peptide chain release factor 1 (RF-1)
ruditapes_c21872	translational termination	cell organization and biogenesis	P	Peptide chain release factor 1 (RF-1)
ruditapes_c13037	valyl-tRNA aminoacylation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13037	valyl-tRNA aminoacylation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13037	translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13037	tRNA aminoacylation for protein translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c13037	tRNA aminoacylation for protein translation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c17333	translation	protein metabolism	P	30S ribosomal protein S18
ruditapes2_c3709	response to oxidative stress	stress response	P	Glutathione peroxidase 3 (GPx-3) (GSHPx-3) (EC 1.11.1.9) (Plasma glutathione peroxidase) (GPx-P) (GSHPx-P)
ruditapes2_c3228	oxidation reduction	other metabolic processes	P	Glutathione peroxidase 3 (GPx-3) (GSHPx-3) (EC 1.11.1.9) (Plasma glutathione peroxidase) (GPx-P) (GSHPx-P)
ruditapes2_c3709	oxidation reduction	other metabolic processes	P	Glutathione peroxidase 3 (GPx-3) (GSHPx-3) (EC 1.11.1.9) (Plasma glutathione peroxidase) (GPx-P) (GSHPx-P)
ruditapes2_c3228	protein homotetramerization	cell organization and biogenesis	P	Glutathione peroxidase 3 (GPx-3) (GSHPx-3) (EC 1.11.1.9) (Plasma glutathione peroxidase) (GPx-P) (GSHPx-P)
ruditapes2_c3709	protein homotetramerization	cell organization and biogenesis	P	Glutathione peroxidase 3 (GPx-3) (GSHPx-3) (EC 1.11.1.9) (Plasma glutathione peroxidase) (GPx-P) (GSHPx-P)
ruditapes2_c3228	response to oxidative stress	stress response	P	Glutathione peroxidase 3 (GPx-3) (GSHPx-3) (EC 1.11.1.9) (Plasma glutathione peroxidase) (GPx-P) (GSHPx-P)
ruditapes_c31481	DNA repair	stress response	P	Structure-specific endonuclease subunit SLX1 homolog 2 (EC 3.6.1.-)
ruditapes_c31481	DNA repair	DNA metabolism	P	Structure-specific endonuclease subunit SLX1 homolog 2 (EC 3.6.1.-)
ruditapes_c31481	response to DNA damage stimulus	stress response	P	Structure-specific endonuclease subunit SLX1 homolog 2 (EC 3.6.1.-)
ruditapes_c31481	DNA recombination	DNA metabolism	P	Structure-specific endonuclease subunit SLX1 homolog 2 (EC 3.6.1.-)
ruditapes_c14829	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor 38A
ruditapes_c14829	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor 38A
ruditapes_c14829	biological_process	other biological processes	P	Pre-mRNA-splicing factor 38A
ruditapes_c17445	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_lrc38707	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc38707	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc38707	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc38707	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_lrc38707	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c25952	oxidation reduction	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes_c25952	glycine metabolic process	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes_c17555	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c17555	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c17555	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_c1464	RNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes2_c1464	tRNA processing	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes2_c1464	biopolymer modification	other metabolic processes	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes2_c1464	tRNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c2850	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c2850	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c2850	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c2850	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c18670	ATP hydrolysis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18670	ion transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18670	proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18670	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18670	ATP metabolic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18670	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18670	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c18670	transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c28832	proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c28832	ATP synthesis coupled proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c28832	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c28832	ion transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c28832	ATP biosynthetic process	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c28832	transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes_c4680	translation	protein metabolism	P	50S ribosomal protein L25 (General stress protein CTC)
ruditapes2_c1584	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes2_c1584	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes2_c1584	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes_c19994	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c19994	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c18318	lipid biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_c18318	lipid A biosynthetic process	other metabolic processes	P	UDP-3-O-acylglucosamine N-acyltransferase (EC 2.3.1.-)
ruditapes_c6974	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c6974	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c6974	oxidation reduction	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c6974	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes2_c2542	G-protein coupled receptor protein signaling pathway	signal transduction	P	Lysophosphatidic acid receptor 6 (LPA receptor 6) (LPA-6) (Oleoyl-L-alpha-lysophosphatidic acid receptor) (P2Y purinoceptor 5) (P2Y5) (Purinergic receptor 5)
ruditapes2_c2542	signal transduction	signal transduction	P	Lysophosphatidic acid receptor 6 (LPA receptor 6) (LPA-6) (Oleoyl-L-alpha-lysophosphatidic acid receptor) (P2Y purinoceptor 5) (P2Y5) (Purinergic receptor 5)
ruditapes_c1331	potassium ion transport	transport	P	BTB/POZ domain-containing protein KCTD21
ruditapes_c8364	lipid metabolic process	other metabolic processes	P	"Acyl-CoA synthetase family member 3, mitochondrial (EC 6.2.1.-)"
ruditapes_c8364	fatty acid metabolic process	other metabolic processes	P	"Acyl-CoA synthetase family member 3, mitochondrial (EC 6.2.1.-)"
ruditapes_c8364	metabolic process	other metabolic processes	P	"Acyl-CoA synthetase family member 3, mitochondrial (EC 6.2.1.-)"
ruditapes2_c6641	translation	protein metabolism	P	"30S ribosomal protein S18, chloroplastic"
ruditapes_lrc37821	translation	protein metabolism	P	40S ribosomal protein SA (37 kDa laminin receptor precursor) (37LRP) (37/67 kDa laminin receptor) (LRP/LR) (67 kDa laminin receptor) (67LR) (Laminin receptor 1) (LamR) (Laminin-binding protein precursor p40) (LBP/p40)
ruditapes_c7806	translation	protein metabolism	P	60S ribosomal protein L38
ruditapes_c31956	calcium ion transport	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	release of sequestered calcium ion into cytosol	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	negative regulation of ryanodine-sensitive calcium-release channel activity	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	kidney development	developmental processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	positive regulation of gene expression	other metabolic processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	regulation of cAMP metabolic process	other metabolic processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	detection of mechanical stimulus	other biological processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	determination of left/right symmetry	developmental processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	transmembrane calcium ion transport	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	ion transport	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	JAK-STAT cascade	signal transduction	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	transmembrane transport	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	heart development	developmental processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	embryonic placenta development	developmental processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	transport	transport	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	cellular calcium ion homeostasis	other biological processes	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_c31956	cell cycle arrest	cell cycle and proliferation	P	Polycystin-2 (Polycystic kidney disease 2 protein homolog)
ruditapes_lrc12587	establishment of apical/basal cell polarity	cell organization and biogenesis	P	Protein scribble homolog (Scribble1)
ruditapes_lrc12587	neuron migration	developmental processes	P	Protein scribble homolog (Scribble1)
ruditapes_lrc12587	cell differentiation	other biological processes	P	Protein scribble homolog (Scribble1)
ruditapes_lrc12587	apoptosis involved in morphogenesis	death	P	Protein scribble homolog (Scribble1)
ruditapes_lrc12587	negative regulation of mitotic cell cycle	cell cycle and proliferation	P	Protein scribble homolog (Scribble1)
ruditapes_lrc12587	activation of Rac GTPase activity	signal transduction	P	Protein scribble homolog (Scribble1)
ruditapes_lrc12587	cell-cell adhesion	cell adhesion	P	Protein scribble homolog (Scribble1)
ruditapes_lrc12587	cell migration	other biological processes	P	Protein scribble homolog (Scribble1)
ruditapes_lrc12587	positive regulation of apoptosis	death	P	Protein scribble homolog (Scribble1)
ruditapes_lrc12587	positive chemotaxis	other biological processes	P	Protein scribble homolog (Scribble1)
ruditapes_lrc12587	cell proliferation	cell cycle and proliferation	P	Protein scribble homolog (Scribble1)
ruditapes_lrc12587	multicellular organismal development	developmental processes	P	Protein scribble homolog (Scribble1)
ruditapes_c14481	metabolic process	other metabolic processes	P	"Homoaconitase, mitochondrial (EC 4.2.1.36) (Homoaconitate hydratase)"
ruditapes_c14481	lysine biosynthetic process	other metabolic processes	P	"Homoaconitase, mitochondrial (EC 4.2.1.36) (Homoaconitate hydratase)"
ruditapes_c14481	cellular amino acid biosynthetic process	other metabolic processes	P	"Homoaconitase, mitochondrial (EC 4.2.1.36) (Homoaconitate hydratase)"
ruditapes_c3381	ribosome biogenesis	other biological processes	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes_c3381	rRNA processing	RNA metabolism	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes_c15634	amino acid transport	transport	P	Protein BTN1
ruditapes_c15634	transport	transport	P	Protein BTN1
ruditapes_c21128	transport	transport	P	ATP-dependent RNA helicase DBP5 (EC 3.6.4.13)
ruditapes_c21128	mRNA transport	transport	P	ATP-dependent RNA helicase DBP5 (EC 3.6.4.13)
ruditapes_c21128	protein transport	transport	P	ATP-dependent RNA helicase DBP5 (EC 3.6.4.13)
ruditapes_lrc34697	protein peptidyl-prolyl isomerization	protein metabolism	P	FK506-binding protein 1 (FKBP) (EC 5.2.1.8) (FkbA) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rapamycin-binding protein)
ruditapes_lrc34697	protein folding	protein metabolism	P	FK506-binding protein 1 (FKBP) (EC 5.2.1.8) (FkbA) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rapamycin-binding protein)
ruditapes2_c700	GPI anchor biosynthetic process	protein metabolism	P	GPI mannosyltransferase 2 (EC 2.4.1.-) (GPI mannosyltransferase II) (GPI-MT-II) (Glycosylphosphatidylinositol-anchor biosynthesis protein 18)
ruditapes_c2120	GPI anchor biosynthetic process	protein metabolism	P	GPI mannosyltransferase 2 (EC 2.4.1.-) (GPI mannosyltransferase II) (GPI-MT-II) (Glycosylphosphatidylinositol-anchor biosynthesis protein 18)
ruditapes_s37447	rRNA processing	RNA metabolism	P	ATP-dependent RNA helicase DBP8 (EC 3.6.4.13)
ruditapes_s37447	ribosome biogenesis	other biological processes	P	ATP-dependent RNA helicase DBP8 (EC 3.6.4.13)
ruditapes_lrc14061	cell cycle	cell cycle and proliferation	P	Cofilin (Actin-depolymerizing factor 1)
ruditapes2_c237	cell cycle	cell cycle and proliferation	P	Cofilin (Actin-depolymerizing factor 1)
ruditapes2_c28	cell cycle	cell cycle and proliferation	P	Cofilin (Actin-depolymerizing factor 1)
ruditapes2_c237	cell division	other biological processes	P	Cofilin (Actin-depolymerizing factor 1)
ruditapes2_c28	cell division	other biological processes	P	Cofilin (Actin-depolymerizing factor 1)
ruditapes_lrc14061	cell division	other biological processes	P	Cofilin (Actin-depolymerizing factor 1)
ruditapes2_c2521	methylation	other metabolic processes	P	Leucine carboxyl methyltransferase 2 (EC 2.1.1.-) (tRNA wybutosine-synthesizing protein 4)
ruditapes2_c2521	tRNA processing	RNA metabolism	P	Leucine carboxyl methyltransferase 2 (EC 2.1.1.-) (tRNA wybutosine-synthesizing protein 4)
ruditapes_c19114	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_c19114	"transcription, DNA-dependent"	RNA metabolism	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_c19114	chromatin modification	cell organization and biogenesis	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_c19114	histone acetylation	protein metabolism	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_c19114	histone acetylation	cell organization and biogenesis	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_c5310	DNA replication	DNA metabolism	P	FACT complex subunit POB3 (Facilitates chromatin transcription complex subunit POB3)
ruditapes_c5310	response to DNA damage stimulus	stress response	P	FACT complex subunit POB3 (Facilitates chromatin transcription complex subunit POB3)
ruditapes_c5310	"regulation of transcription, DNA-dependent"	RNA metabolism	P	FACT complex subunit POB3 (Facilitates chromatin transcription complex subunit POB3)
ruditapes_c5310	DNA repair	stress response	P	FACT complex subunit POB3 (Facilitates chromatin transcription complex subunit POB3)
ruditapes_c5310	DNA repair	DNA metabolism	P	FACT complex subunit POB3 (Facilitates chromatin transcription complex subunit POB3)
ruditapes_c5310	"transcription, DNA-dependent"	RNA metabolism	P	FACT complex subunit POB3 (Facilitates chromatin transcription complex subunit POB3)
ruditapes_c24368	gluconeogenesis	other metabolic processes	P	"Acetate non-utilizing protein 9, mitochondrial"
ruditapes_c11124	branched chain family amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c11124	cellular amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c11124	oxidation reduction	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c23486	tryptophan biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c23486	cellular amino acid biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c23486	metabolic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c23486	aromatic amino acid family biosynthetic process	other metabolic processes	P	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
ruditapes_c22244	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c22244	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c22244	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c22244	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c22244	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_s34467	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor E (TFE) (TFIIE subunit alpha homolog) (Transcription initiation factor TFIIE)
ruditapes_s38733	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor E (TFE) (TFIIE subunit alpha homolog) (Transcription initiation factor TFIIE)
ruditapes_s38733	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor E (TFE) (TFIIE subunit alpha homolog) (Transcription initiation factor TFIIE)
ruditapes_s34467	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor E (TFE) (TFIIE subunit alpha homolog) (Transcription initiation factor TFIIE)
ruditapes_c8677	one-carbon compound metabolic process	other metabolic processes	P	Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
ruditapes_c18489	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c18489	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c18489	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c18489	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c18489	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c10508	"transcription, DNA-dependent"	RNA metabolism	P	Retinoblastoma-related protein
ruditapes_lrc28180	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Retinoblastoma-related protein
ruditapes_lrc28180	cell cycle	cell cycle and proliferation	P	Retinoblastoma-related protein
ruditapes_c10508	cell cycle	cell cycle and proliferation	P	Retinoblastoma-related protein
ruditapes_c10508	regulation of cell cycle	cell cycle and proliferation	P	Retinoblastoma-related protein
ruditapes_lrc28180	"transcription, DNA-dependent"	RNA metabolism	P	Retinoblastoma-related protein
ruditapes_c10508	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Retinoblastoma-related protein
ruditapes_lrc28180	regulation of cell cycle	cell cycle and proliferation	P	Retinoblastoma-related protein
ruditapes_c11784	DNA replication	DNA metabolism	P	Major DNA-binding protein
ruditapes_c25910	interspecies interaction between organisms	other biological processes	P	Deneddylase ORF22 (EC 3.4.19.12) (EC 3.4.22.-) (Ubiquitin thioesterase)
ruditapes_c25910	proteolysis	protein metabolism	P	Deneddylase ORF22 (EC 3.4.19.12) (EC 3.4.22.-) (Ubiquitin thioesterase)
ruditapes_c7876	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein B (gB) (Glycoprotein II)
ruditapes_c29677	translational initiation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_c29677	GTP catabolic process	other metabolic processes	P	Translation initiation factor IF-2
ruditapes_c29677	translation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_c24495	tRNA aminoacylation for protein translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c24495	tRNA aminoacylation for protein translation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c24495	tyrosyl-tRNA aminoacylation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c24495	tyrosyl-tRNA aminoacylation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c24495	translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes2_c2628	glutathione biosynthetic process	other metabolic processes	P	Carboxylate-amine ligase jk0264 (EC 6.3.-.-)
ruditapes_c9058	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator BetI
ruditapes_c9058	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional regulator BetI
ruditapes_c7763	pyrroloquinoline quinone biosynthetic process	protein metabolism	P	Coenzyme PQQ synthesis protein D (Pyrroloquinoline quinone biosynthesis protein D)
ruditapes_c16491	translation	protein metabolism	P	30S ribosomal protein S8
ruditapes_lrc21272	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (GPAT) (EC 2.3.1.15)
ruditapes_lrc21272	metabolic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (GPAT) (EC 2.3.1.15)
ruditapes_lrc21272	cellular lipid metabolic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (GPAT) (EC 2.3.1.15)
ruditapes_s39945	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_s39945	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c29798	regulation of actin filament polymerization	protein metabolism	P	Actin-related protein 2/3 complex subunit 5 (Arp2/3 complex 16 kDa subunit) (p16-ARC)
ruditapes_c29798	regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 5 (Arp2/3 complex 16 kDa subunit) (p16-ARC)
ruditapes_c20689	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 4
ruditapes_c20689	signal transduction	signal transduction	P	G-protein coupled receptor 4
ruditapes_c13455	methylation	other metabolic processes	P	tRNA methyltransferase 10 homolog A (EC 2.1.1.-) (RNA (guanine-9-)-methyltransferase domain-containing protein 2)
ruditapes_c7907	glycolysis	other metabolic processes	P	Fructose-bisphosphate aldolase C-A (EC 4.1.2.13) (Aldolase C-like) (Brain-type aldolase-A)
ruditapes_c11956	biological_process	other biological processes	P	Cation transport regulator-like protein 2
ruditapes_c25216	synaptic vesicle maturation	transport	P	Protein unc-13 homolog A (Munc13-1)
ruditapes_c25216	synaptic vesicle maturation	cell organization and biogenesis	P	Protein unc-13 homolog A (Munc13-1)
ruditapes_c25216	"synaptic transmission, glutamatergic"	cell-cell signaling	P	Protein unc-13 homolog A (Munc13-1)
ruditapes_c25216	exocytosis	transport	P	Protein unc-13 homolog A (Munc13-1)
ruditapes_c25216	synaptic vesicle docking during exocytosis	transport	P	Protein unc-13 homolog A (Munc13-1)
ruditapes_c25216	synaptic vesicle docking during exocytosis	cell-cell signaling	P	Protein unc-13 homolog A (Munc13-1)
ruditapes_c25216	beta-amyloid metabolic process	other metabolic processes	P	Protein unc-13 homolog A (Munc13-1)
ruditapes_c25216	regulation of short-term neuronal synaptic plasticity	cell-cell signaling	P	Protein unc-13 homolog A (Munc13-1)
ruditapes_c8490	signal transduction	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-1) (Phospholipase C-eta-1) (PLC-eta-1) (Phospholipase C-like protein 3) (PLC-L3)"
ruditapes_c11901	lipid catabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-1) (Phospholipase C-eta-1) (PLC-eta-1) (Phospholipase C-like protein 3) (PLC-L3)"
ruditapes_c11901	signal transduction	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-1) (Phospholipase C-eta-1) (PLC-eta-1) (Phospholipase C-like protein 3) (PLC-L3)"
ruditapes_c11901	phosphoinositide-mediated signaling	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-1) (Phospholipase C-eta-1) (PLC-eta-1) (Phospholipase C-like protein 3) (PLC-L3)"
ruditapes_c8490	lipid metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-1) (Phospholipase C-eta-1) (PLC-eta-1) (Phospholipase C-like protein 3) (PLC-L3)"
ruditapes_c11901	lipid metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-1) (Phospholipase C-eta-1) (PLC-eta-1) (Phospholipase C-like protein 3) (PLC-L3)"
ruditapes_c8490	lipid catabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-1) (Phospholipase C-eta-1) (PLC-eta-1) (Phospholipase C-like protein 3) (PLC-L3)"
ruditapes_c8490	phosphoinositide-mediated signaling	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 (EC 3.1.4.11) (Phosphoinositide phospholipase C-eta-1) (Phospholipase C-eta-1) (PLC-eta-1) (Phospholipase C-like protein 3) (PLC-L3)"
ruditapes_c11758	G-protein coupled receptor protein signaling pathway	signal transduction	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes_c11758	signal transduction	signal transduction	P	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)
ruditapes2_c2127	DNA recombination	DNA metabolism	P	Recombination protein RecR
ruditapes2_c2127	response to DNA damage stimulus	stress response	P	Recombination protein RecR
ruditapes2_c2127	DNA repair	DNA metabolism	P	Recombination protein RecR
ruditapes2_c2127	DNA repair	stress response	P	Recombination protein RecR
ruditapes_c1077	cellular metabolic process	other metabolic processes	P	Epimerase family protein SH2119
ruditapes_c2293	metabolic process	other metabolic processes	P	D-alanine--poly(phosphoribitol) ligase subunit 1 (EC 6.1.1.13) (D-alanine-D-alanyl carrier protein ligase) (DCL) (D-alanine-activating enzyme) (DAE)
ruditapes_c2293	teichoic acid biosynthetic process	other metabolic processes	P	D-alanine--poly(phosphoribitol) ligase subunit 1 (EC 6.1.1.13) (D-alanine-D-alanyl carrier protein ligase) (DCL) (D-alanine-activating enzyme) (DAE)
ruditapes_s40201	translational termination	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_s40201	translational termination	cell organization and biogenesis	P	Peptide chain release factor 3 (RF-3)
ruditapes_s40201	translation	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_s40201	GTP catabolic process	other metabolic processes	P	Peptide chain release factor 3 (RF-3)
ruditapes_c13714	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_c13714	metabolic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_c13714	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_c25132	RNA processing	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes_c25132	mRNA catabolic process	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes_c4200	response to stress	stress response	P	Putative universal stress protein SH1215
ruditapes_c17337	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c17337	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c17337	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c17337	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c17337	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c17337	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c20869	response to stress	stress response	P	Iron-sulfur cluster repair protein ScdA
ruditapes_c20869	response to oxidative stress	stress response	P	Iron-sulfur cluster repair protein ScdA
ruditapes_c27585	protein transport	transport	P	Accessory Sec system protein translocase subunit SecY2
ruditapes_c27585	transport	transport	P	Accessory Sec system protein translocase subunit SecY2
ruditapes_c26447	signal transduction	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes2_c1716	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes2_c1716	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c22644	signal transduction	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c26447	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c26447	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c22644	G-protein coupled receptor protein signaling pathway	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c26447	G-protein coupled receptor protein signaling pathway	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes2_c1716	G-protein coupled receptor protein signaling pathway	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c7649	G-protein coupled receptor protein signaling pathway	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c22644	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c22644	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes2_c1716	signal transduction	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c7649	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c7649	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c7649	signal transduction	signal transduction	P	Octopamine receptor beta-3R (DmOct-beta-3R)
ruditapes_c10258	signal transduction	signal transduction	P	Octopamine receptor beta-2R (DmOct-beta-12) (DmOct-beta-2R)
ruditapes_c10258	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Octopamine receptor beta-2R (DmOct-beta-12) (DmOct-beta-2R)
ruditapes_c10258	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Octopamine receptor beta-2R (DmOct-beta-12) (DmOct-beta-2R)
ruditapes_c10258	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Octopamine receptor beta-2R (DmOct-beta-12) (DmOct-beta-2R)
ruditapes_c10258	G-protein coupled receptor protein signaling pathway	signal transduction	P	Octopamine receptor beta-2R (DmOct-beta-12) (DmOct-beta-2R)
ruditapes_c8019	cell adhesion	cell adhesion	P	"Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (CCP module-containing protein 22) (Polydom) (Selectin-like osteoblast-derived protein) (SEL-OB) (Serologically defined breast cancer antigen NY-BR-38)"
ruditapes_c21382	cell adhesion	cell adhesion	P	"Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (CCP module-containing protein 22) (Polydom) (Selectin-like osteoblast-derived protein) (SEL-OB) (Serologically defined breast cancer antigen NY-BR-38)"
ruditapes_c24493	cell adhesion	cell adhesion	P	"Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (CCP module-containing protein 22) (Polydom) (Selectin-like osteoblast-derived protein) (SEL-OB) (Serologically defined breast cancer antigen NY-BR-38)"
ruditapes_c11181	cell adhesion	cell adhesion	P	"Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (CCP module-containing protein 22) (Polydom) (Selectin-like osteoblast-derived protein) (SEL-OB) (Serologically defined breast cancer antigen NY-BR-38)"
ruditapes_c11486	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ATG1 (EC 2.7.11.1) (Autophagy-related protein 1)
ruditapes_c11486	autophagy	other metabolic processes	P	Serine/threonine-protein kinase ATG1 (EC 2.7.11.1) (Autophagy-related protein 1)
ruditapes_c11486	protein transport	transport	P	Serine/threonine-protein kinase ATG1 (EC 2.7.11.1) (Autophagy-related protein 1)
ruditapes_c11486	transport	transport	P	Serine/threonine-protein kinase ATG1 (EC 2.7.11.1) (Autophagy-related protein 1)
ruditapes_c11486	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase ATG1 (EC 2.7.11.1) (Autophagy-related protein 1)
ruditapes_c3460	transport	transport	P	Protein transport protein SEC31
ruditapes_c1508	transport	transport	P	Protein transport protein SEC31
ruditapes_c3460	protein transport	transport	P	Protein transport protein SEC31
ruditapes_c3460	vesicle-mediated transport	transport	P	Protein transport protein SEC31
ruditapes_c1508	vesicle-mediated transport	transport	P	Protein transport protein SEC31
ruditapes_c1508	protein transport	transport	P	Protein transport protein SEC31
ruditapes2_c2481	rRNA processing	RNA metabolism	P	Ribosome biogenesis protein NSA2
ruditapes2_c2481	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein NSA2
ruditapes2_c666	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein NSA2
ruditapes_s36072	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein NSA2
ruditapes_s36072	rRNA processing	RNA metabolism	P	Ribosome biogenesis protein NSA2
ruditapes2_c666	rRNA processing	RNA metabolism	P	Ribosome biogenesis protein NSA2
ruditapes_c25141	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12)
ruditapes_c25141	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12)
ruditapes_c25141	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12)
ruditapes_c28665	mRNA processing	RNA metabolism	P	U2 small nuclear ribonucleoprotein A' (U2 snRNP A')
ruditapes_c28665	RNA splicing	RNA metabolism	P	U2 small nuclear ribonucleoprotein A' (U2 snRNP A')
ruditapes_c8128	ubiquinone biosynthetic process	other metabolic processes	P	"Ubiquinone biosynthesis protein COQ4, mitochondrial (Coenzyme Q biosynthesis protein 4)"
ruditapes2_c789	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase H (PPIase H) (EC 5.2.1.8) (Rotamase H) (Fragment)
ruditapes2_c789	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase H (PPIase H) (EC 5.2.1.8) (Rotamase H) (Fragment)
ruditapes_c10684	ATP catabolic process	other metabolic processes	P	ATPase GET3 (EC 3.6.-.-) (Arsenical pump-driving ATPase) (Arsenite-stimulated ATPase) (Golgi to ER traffic protein 3) (Guided entry of tail-anchored proteins 3)
ruditapes_c10684	transport	transport	P	ATPase GET3 (EC 3.6.-.-) (Arsenical pump-driving ATPase) (Arsenite-stimulated ATPase) (Golgi to ER traffic protein 3) (Guided entry of tail-anchored proteins 3)
ruditapes_c27599	ribosome biogenesis	other biological processes	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes_c27599	rRNA processing	RNA metabolism	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes_c30362	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nascent polypeptide-associated complex subunit beta (NAC-beta) (Beta-NAC)
ruditapes_c30362	"transcription, DNA-dependent"	RNA metabolism	P	Nascent polypeptide-associated complex subunit beta (NAC-beta) (Beta-NAC)
ruditapes_c30362	protein transport	transport	P	Nascent polypeptide-associated complex subunit beta (NAC-beta) (Beta-NAC)
ruditapes_c30362	transport	transport	P	Nascent polypeptide-associated complex subunit beta (NAC-beta) (Beta-NAC)
ruditapes_lrc36500	protein folding	protein metabolism	P	Serine/threonine-protein phosphatase 2A activator 2 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-2) (PPIase PTPA-2) (Rotamase PTPA-2) (Phosphotyrosyl phosphatase activator 2)
ruditapes_lrc36500	protein peptidyl-prolyl isomerization	protein metabolism	P	Serine/threonine-protein phosphatase 2A activator 2 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-2) (PPIase PTPA-2) (Rotamase PTPA-2) (Phosphotyrosyl phosphatase activator 2)
ruditapes_c26014	"transcription, DNA-dependent"	RNA metabolism	P	Transcription activator of gluconeogenesis ERT1
ruditapes_c26014	gluconeogenesis	other metabolic processes	P	Transcription activator of gluconeogenesis ERT1
ruditapes_c26014	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription activator of gluconeogenesis ERT1
ruditapes_c26014	signal transduction	signal transduction	P	Transcription activator of gluconeogenesis ERT1
ruditapes_c21740	transport	transport	P	Autophagy-related protein 2
ruditapes_c21740	protein transport	transport	P	Autophagy-related protein 2
ruditapes_c21740	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes2_lrc4495	nucleosome assembly	cell organization and biogenesis	P	Histone H2A.Z
ruditapes2_lrc4495	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone H2A.Z
ruditapes2_lrc4495	chromatin modification	cell organization and biogenesis	P	Histone H2A.Z
ruditapes2_lrc4495	"transcription, DNA-dependent"	RNA metabolism	P	Histone H2A.Z
ruditapes_lrc27817	methylation	other metabolic processes	P	tRNA (guanine(37)-N1)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase) (tRNA methyltransferase 5)
ruditapes_lrc27817	tRNA processing	RNA metabolism	P	tRNA (guanine(37)-N1)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase) (tRNA methyltransferase 5)
ruditapes2_c3704	regulation of RNA elongation	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes2_c3704	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes2_c3704	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes2_c3704	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes_c22234	biological_process	other biological processes	P	Protein odr-4 homolog (mODR-4)
ruditapes_c22234	oxidation reduction	other metabolic processes	P	Protein odr-4 homolog (mODR-4)
ruditapes2_c856	translation	protein metabolism	P	60S ribosomal protein L36
ruditapes_lrc11074	translation	protein metabolism	P	60S ribosomal protein L36
ruditapes_c632	translation	protein metabolism	P	40S ribosomal protein S29
ruditapes_s35272	translation	protein metabolism	P	60S ribosomal protein L17
ruditapes_lrc34342	translation	protein metabolism	P	40S ribosomal protein S4
ruditapes_c22483	translation	protein metabolism	P	40S ribosomal protein S4
ruditapes_lrc21475	translation	protein metabolism	P	40S ribosomal protein S4
ruditapes2_c3108	translation	protein metabolism	P	40S ribosomal protein S4
ruditapes_c11438	proteolysis	protein metabolism	P	Serine carboxypeptidase-like 32 (EC 3.4.16.-)
ruditapes2_c1282	oxidation reduction	other metabolic processes	P	"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) (Acireductone dioxygenase (Fe(2+)-requiring)) (ARD) (Fe-ARD)"
ruditapes2_c1282	methionine biosynthetic process	other metabolic processes	P	"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) (Acireductone dioxygenase (Fe(2+)-requiring)) (ARD) (Fe-ARD)"
ruditapes2_c1282	cellular amino acid biosynthetic process	other metabolic processes	P	"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) (Acireductone dioxygenase (Fe(2+)-requiring)) (ARD) (Fe-ARD)"
ruditapes_c4474	cellular amino acid biosynthetic process	other metabolic processes	P	Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine O-trans-acetylase) (HTA) (Homoserine transacetylase)
ruditapes_c4474	methionine biosynthetic process	other metabolic processes	P	Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine O-trans-acetylase) (HTA) (Homoserine transacetylase)
ruditapes_c13113	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c13113	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c13113	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c22002	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase J (EC 2.1.1.242) (16S rRNA m2G1516 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase)
ruditapes_c22002	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase J (EC 2.1.1.242) (16S rRNA m2G1516 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase)
ruditapes_c15690	biological_process	other biological processes	P	"Hydroxyacid-oxoacid transhydrogenase, mitochondrial (HOT) (EC 1.1.99.24) (Alcohol dehydrogenase iron-containing protein 1) (ADHFe1)"
ruditapes_c15690	oxidation reduction	other metabolic processes	P	"Hydroxyacid-oxoacid transhydrogenase, mitochondrial (HOT) (EC 1.1.99.24) (Alcohol dehydrogenase iron-containing protein 1) (ADHFe1)"
ruditapes_c15690	molecular hydrogen transport	transport	P	"Hydroxyacid-oxoacid transhydrogenase, mitochondrial (HOT) (EC 1.1.99.24) (Alcohol dehydrogenase iron-containing protein 1) (ADHFe1)"
ruditapes_c17798	proteolysis	protein metabolism	P	Coagulation factor X (EC 3.4.21.6) [Cleaved into: Factor X light chain; Factor X heavy chain; Activated factor Xa heavy chain]
ruditapes_c17798	blood coagulation	stress response	P	Coagulation factor X (EC 3.4.21.6) [Cleaved into: Factor X light chain; Factor X heavy chain; Activated factor Xa heavy chain]
ruditapes_c10554	biological_process	other biological processes	P	Origin recognition complex subunit 3
ruditapes_c10554	DNA replication	DNA metabolism	P	Origin recognition complex subunit 3
ruditapes_c4900	RNA-dependent DNA replication	DNA metabolism	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c4900	metabolic process	other metabolic processes	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c4900	interspecies interaction between organisms	other biological processes	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c4900	evasion by virus of host immune response	stress response	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c4900	DNA replication	DNA metabolism	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_lrc32562	translational elongation	protein metabolism	P	Elongation factor 1-delta (EF-1-delta)
ruditapes_c4033	translational elongation	protein metabolism	P	Elongation factor 1-delta (EF-1-delta)
ruditapes_lrc32562	translation	protein metabolism	P	Elongation factor 1-delta (EF-1-delta)
ruditapes_c4033	translation	protein metabolism	P	Elongation factor 1-delta (EF-1-delta)
ruditapes_c11927	positive regulation of GTPase activity	other biological processes	P	Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI alpha)
ruditapes_s38482	proteolysis	protein metabolism	P	"Legumain (EC 3.4.22.34) (Asparaginyl endopeptidase) (Protease, cysteine 1)"
ruditapes_c14777	oligodendrocyte development	developmental processes	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c14777	translation	protein metabolism	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c14777	translational initiation	protein metabolism	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c14777	cellular response to stimulus	other biological processes	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c14777	cellular metabolic process	other metabolic processes	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes2_c835	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes2_c835	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes2_c835	internal protein amino acid acetylation	protein metabolism	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes2_c835	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes2_c835	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes2_c835	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, mitochondrial (EC 1.1.1.37)"
ruditapes2_c940	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Complex I-B8) (CI-B8) (NADH-ubiquinone oxidoreductase B8 subunit)
ruditapes_c4223	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Complex I-B8) (CI-B8) (NADH-ubiquinone oxidoreductase B8 subunit)
ruditapes2_c940	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Complex I-B8) (CI-B8) (NADH-ubiquinone oxidoreductase B8 subunit)
ruditapes_c4223	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Complex I-B8) (CI-B8) (NADH-ubiquinone oxidoreductase B8 subunit)
ruditapes_c27929	protein modification process	protein metabolism	P	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PIMT) (EC 2.1.1.77) (L-isoaspartyl protein carboxyl methyltransferase) (Protein L-isoaspartyl/D-aspartyl methyltransferase) (Protein-beta-aspartate methyltransferase)
ruditapes_c27929	methylation	other metabolic processes	P	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PIMT) (EC 2.1.1.77) (L-isoaspartyl protein carboxyl methyltransferase) (Protein L-isoaspartyl/D-aspartyl methyltransferase) (Protein-beta-aspartate methyltransferase)
ruditapes_c8412	glycolysis	other metabolic processes	P	Alpha-enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (Enolase 1) (Non-neural enolase) (NNE)
ruditapes_lrc33198	translation	protein metabolism	P	60S ribosomal protein L10a
ruditapes_lrc33694	translation	protein metabolism	P	60S ribosomal protein L10a
ruditapes_lrc33670	translation	protein metabolism	P	60S ribosomal protein L10a
ruditapes_lrc34299	translation	protein metabolism	P	60S ribosomal protein L10a
ruditapes_lrc37105	translation	protein metabolism	P	60S ribosomal protein L4
ruditapes_c12980	oxidation reduction	other metabolic processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c12980	sperm motility	other biological processes	P	Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol 2-dehydrogenase)
ruditapes_c4983	apoptotic nuclear changes	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_c4983	apoptotic nuclear changes	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc6021	apoptotic nuclear changes	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc6021	apoptotic nuclear changes	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_c4881	induction of apoptosis	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc8625	induction of apoptosis	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc5709	apoptotic nuclear changes	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc5709	apoptotic nuclear changes	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc6021	negative regulation of cell growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_c4881	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc6021	negative regulation of translation	protein metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_c4881	induction of apoptosis by extracellular signals	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_c4983	induction of apoptosis	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc5709	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_c4881	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc5709	negative regulation of cell growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_c4983	negative regulation of cell growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc8625	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc6021	induction of apoptosis	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc5709	induction of apoptosis by extracellular signals	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc8625	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc36132	induction of apoptosis	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_c4881	apoptotic nuclear changes	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_c4881	apoptotic nuclear changes	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc36132	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc5709	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc8625	apoptotic nuclear changes	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc8625	apoptotic nuclear changes	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_c4983	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc36132	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_c4881	negative regulation of cell growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc8625	induction of apoptosis by extracellular signals	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc6021	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_c4983	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc8625	negative regulation of cell growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc5709	negative regulation of translation	protein metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc5709	induction of apoptosis	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_c4983	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_c4983	negative regulation of translation	protein metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc36132	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc6021	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc36132	apoptotic nuclear changes	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc36132	apoptotic nuclear changes	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc6021	induction of apoptosis by extracellular signals	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc8625	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc36132	induction of apoptosis by extracellular signals	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_c4983	induction of apoptosis by extracellular signals	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_c4881	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc8625	negative regulation of translation	protein metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc5709	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_lrc6021	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc36132	negative regulation of translation	protein metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc36132	negative regulation of cell growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes2_c4881	negative regulation of translation	protein metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_s37842	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 6B (26S proteasome AAA-ATPase subunit RPT3) (Proteasome 26S subunit ATPase 4)
ruditapes_lrc20511	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 6B (26S proteasome AAA-ATPase subunit RPT3) (Proteasome 26S subunit ATPase 4)
ruditapes_c8468	phosphorylation	other metabolic processes	P	Eukaryotic translation initiation factor 2-alpha kinase 1 (EC 2.7.11.1) (Heme-regulated eukaryotic initiation factor eIF-2-alpha kinase) (Hemin-sensitive initiation factor 2-alpha kinase)
ruditapes_c8468	negative regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 1 (EC 2.7.11.1) (Heme-regulated eukaryotic initiation factor eIF-2-alpha kinase) (Hemin-sensitive initiation factor 2-alpha kinase)
ruditapes_c8468	response to stress	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 1 (EC 2.7.11.1) (Heme-regulated eukaryotic initiation factor eIF-2-alpha kinase) (Hemin-sensitive initiation factor 2-alpha kinase)
ruditapes_c8468	protein amino acid phosphorylation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 1 (EC 2.7.11.1) (Heme-regulated eukaryotic initiation factor eIF-2-alpha kinase) (Hemin-sensitive initiation factor 2-alpha kinase)
ruditapes_c36349	metabolic process	other metabolic processes	P	Tumor necrosis factor alpha-induced protein 3 (TNF alpha-induced protein 3) (EC 3.4.19.12) (EC 6.3.2.-) [Cleaved into: A20p50; A20p37]
ruditapes_c36349	protein K63-linked deubiquitination	protein metabolism	P	Tumor necrosis factor alpha-induced protein 3 (TNF alpha-induced protein 3) (EC 3.4.19.12) (EC 6.3.2.-) [Cleaved into: A20p50; A20p37]
ruditapes_c33632	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Tumor necrosis factor alpha-induced protein 3 (TNF alpha-induced protein 3) (EC 3.4.19.12) (EC 6.3.2.-) [Cleaved into: A20p50; A20p37]
ruditapes_c36349	proteolysis	protein metabolism	P	Tumor necrosis factor alpha-induced protein 3 (TNF alpha-induced protein 3) (EC 3.4.19.12) (EC 6.3.2.-) [Cleaved into: A20p50; A20p37]
ruditapes_c36349	apoptosis	death	P	Tumor necrosis factor alpha-induced protein 3 (TNF alpha-induced protein 3) (EC 3.4.19.12) (EC 6.3.2.-) [Cleaved into: A20p50; A20p37]
ruditapes_c33632	proteolysis	protein metabolism	P	Tumor necrosis factor alpha-induced protein 3 (TNF alpha-induced protein 3) (EC 3.4.19.12) (EC 6.3.2.-) [Cleaved into: A20p50; A20p37]
ruditapes_c33632	apoptosis	death	P	Tumor necrosis factor alpha-induced protein 3 (TNF alpha-induced protein 3) (EC 3.4.19.12) (EC 6.3.2.-) [Cleaved into: A20p50; A20p37]
ruditapes_c36349	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Tumor necrosis factor alpha-induced protein 3 (TNF alpha-induced protein 3) (EC 3.4.19.12) (EC 6.3.2.-) [Cleaved into: A20p50; A20p37]
ruditapes_c33632	metabolic process	other metabolic processes	P	Tumor necrosis factor alpha-induced protein 3 (TNF alpha-induced protein 3) (EC 3.4.19.12) (EC 6.3.2.-) [Cleaved into: A20p50; A20p37]
ruditapes_c33632	protein K63-linked deubiquitination	protein metabolism	P	Tumor necrosis factor alpha-induced protein 3 (TNF alpha-induced protein 3) (EC 3.4.19.12) (EC 6.3.2.-) [Cleaved into: A20p50; A20p37]
ruditapes_c11296	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Bromodomain testis-specific protein
ruditapes_c11296	"transcription, DNA-dependent"	RNA metabolism	P	Bromodomain testis-specific protein
ruditapes_c23780	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Bromodomain testis-specific protein
ruditapes_c23780	"transcription, DNA-dependent"	RNA metabolism	P	Bromodomain testis-specific protein
ruditapes_lrc36147	translation	protein metabolism	P	60S ribosomal protein L13a
ruditapes_lrc34981	protein folding	protein metabolism	P	Prefoldin subunit 1
ruditapes_s39504	protein folding	protein metabolism	P	Prefoldin subunit 1
ruditapes_c22180	gene silencing by RNA	other metabolic processes	P	RISC-loading complex subunit tarbp2
ruditapes_c1870	transport	transport	P	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)
ruditapes_c1870	anion transport	transport	P	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)
ruditapes_c1870	sodium ion transport	transport	P	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)
ruditapes_c1870	ion transport	transport	P	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)
ruditapes2_c574	spermatogenesis	other biological processes	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes_c23924	spermatogenesis	other biological processes	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes2_c574	DNA repair	stress response	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes2_c574	DNA repair	DNA metabolism	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes2_c574	protein modification process	protein metabolism	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes_c23924	DNA repair	DNA metabolism	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes_c23924	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes_c23924	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes_c23924	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes_c23924	protein modification process	protein metabolism	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes2_c574	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes2_c574	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes2_c574	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes_c23924	DNA repair	stress response	P	E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes_c15887	biological_process	other biological processes	P	Xin actin-binding repeat-containing protein 2 (Beta-xin) (Cardiomyopathy-associated protein 3) (Myogenic MEF2-activated Xin-related protein) (Myomaxin) (mXinbeta)
ruditapes_c15887	actin cytoskeleton organization	cell organization and biogenesis	P	Xin actin-binding repeat-containing protein 2 (Beta-xin) (Cardiomyopathy-associated protein 3) (Myogenic MEF2-activated Xin-related protein) (Myomaxin) (mXinbeta)
ruditapes_lrc38537	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase-like protein
ruditapes_lrc38537	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase-like protein
ruditapes_c17927	response to antibiotic	other biological processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c17927	peptidoglycan biosynthetic process	other metabolic processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c17927	regulation of cell shape	cell organization and biogenesis	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c17927	metabolic process	other metabolic processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c17927	peptidoglycan-based cell wall biogenesis	other biological processes	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c17927	cell wall organization	cell organization and biogenesis	P	Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes2_c2635	transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c2635	ATP synthesis coupled proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c2635	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c2635	proton transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c2635	ATP biosynthetic process	other metabolic processes	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c2635	ion transport	transport	P	ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
ruditapes2_c963	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c963	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c963	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c963	lipid glycosylation	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c963	carbohydrate metabolic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c963	cell division	other biological processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c963	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes2_c963	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase)
ruditapes_c26858	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c26858	methionine biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c26858	oxidation reduction	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c26858	diaminopimelate biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c26858	cellular amino acid biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c26858	isoleucine biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c26858	lysine biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c26858	threonine biosynthetic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c26858	cellular amino acid metabolic process	other metabolic processes	P	Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase)
ruditapes_c24608	cell wall organization	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c24608	peptidoglycan biosynthetic process	other metabolic processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c24608	cell division	other biological processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c24608	regulation of cell shape	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c24608	cell cycle	cell cycle and proliferation	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c2859	proteolysis	protein metabolism	P	Uncharacterized zinc protease RF
ruditapes_c17364	transport	transport	P	Putative transporter AmpG 2
ruditapes_c17364	transmembrane transport	transport	P	Putative transporter AmpG 2
ruditapes2_c2704	translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes2_c2704	tRNA aminoacylation for protein translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes2_c2704	tRNA aminoacylation for protein translation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes2_c2704	valyl-tRNA aminoacylation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes2_c2704	valyl-tRNA aminoacylation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c10333	protein secretion by the type IV secretion system	transport	P	Uncharacterized protein RF
ruditapes_lrc34030	protein secretion by the type IV secretion system	transport	P	Uncharacterized protein RF
ruditapes_lrc39219	protein secretion by the type IV secretion system	transport	P	Uncharacterized protein RF
ruditapes_c13486	biological_process	other biological processes	P	GRIP1-associated protein 1 (GRASP-1)
ruditapes_c11536	purine nucleotide biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c11536	glutamine metabolic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c11536	GMP biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c11536	response to drug	other biological processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c12752	methylation	other metabolic processes	P	tRNA (cytosine(34)-C(5))-methyltransferase (EC 2.1.1.203) (NOL1/NOP2/Sun domain family member 2)
ruditapes_c12752	tRNA processing	RNA metabolism	P	tRNA (cytosine(34)-C(5))-methyltransferase (EC 2.1.1.203) (NOL1/NOP2/Sun domain family member 2)
ruditapes2_c1668	translation	protein metabolism	P	"39S ribosomal protein L52, mitochondrial (L52mt) (MRP-L52)"
ruditapes_c28976	GPI anchor biosynthetic process	protein metabolism	P	GPI mannosyltransferase 3 (EC 2.4.1.-) (GPI mannosyltransferase III) (GPI-MT-III) (Phosphatidylinositol-glycan biosynthesis class B protein) (PIG-B)
ruditapes_c23719	ubiquinone biosynthetic process	other metabolic processes	P	"2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial (EC 2.1.1.201) (Ubiquinone biosynthesis methyltransferase COQ5)"
ruditapes_c23719	methylation	other metabolic processes	P	"2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial (EC 2.1.1.201) (Ubiquinone biosynthesis methyltransferase COQ5)"
ruditapes2_c2763	signal transduction	signal transduction	P	Ropporin-1-like protein
ruditapes_c19982	DNA repair	stress response	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (MMS21 homolog) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes_c19982	DNA repair	DNA metabolism	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (MMS21 homolog) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes_c19982	response to DNA damage stimulus	stress response	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (MMS21 homolog) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes_c19982	DNA recombination	DNA metabolism	P	E3 SUMO-protein ligase NSE2 (EC 6.3.2.-) (MMS21 homolog) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)
ruditapes_c10187	negative regulation of S phase of mitotic cell cycle	cell cycle and proliferation	P	DCN1-like protein 3 (DCUN1 domain-containing protein 3) (Defective in cullin neddylation protein 1-like protein 3)
ruditapes_c10187	response to UV-C	other biological processes	P	DCN1-like protein 3 (DCUN1 domain-containing protein 3) (Defective in cullin neddylation protein 1-like protein 3)
ruditapes_c10187	response to gamma radiation	other biological processes	P	DCN1-like protein 3 (DCUN1 domain-containing protein 3) (Defective in cullin neddylation protein 1-like protein 3)
ruditapes_c10187	negative regulation of cell growth	other biological processes	P	DCN1-like protein 3 (DCUN1 domain-containing protein 3) (Defective in cullin neddylation protein 1-like protein 3)
ruditapes_c10187	positive regulation of apoptosis	death	P	DCN1-like protein 3 (DCUN1 domain-containing protein 3) (Defective in cullin neddylation protein 1-like protein 3)
ruditapes2_c3066	biological_process	other biological processes	P	UPF0693 protein C10orf32 homolog
ruditapes_c11254	inositol catabolic process	other metabolic processes	P	Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) (MI oxygenase)
ruditapes_c11254	oxidation reduction	other metabolic processes	P	Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) (MI oxygenase)
ruditapes_lrc30068	biological_process	other biological processes	P	Coiled-coil domain-containing protein 22
ruditapes_c15791	Golgi organization	cell organization and biogenesis	P	Vacuolar protein sorting-associated protein 51 homolog (Protein fat-free homolog)
ruditapes_c15791	protein transport	transport	P	Vacuolar protein sorting-associated protein 51 homolog (Protein fat-free homolog)
ruditapes_c15791	transport	transport	P	Vacuolar protein sorting-associated protein 51 homolog (Protein fat-free homolog)
ruditapes_c15791	regulation of phospholipase activity	other biological processes	P	Vacuolar protein sorting-associated protein 51 homolog (Protein fat-free homolog)
ruditapes_c15791	lipid digestion	other biological processes	P	Vacuolar protein sorting-associated protein 51 homolog (Protein fat-free homolog)
ruditapes_c15791	lipid transport	transport	P	Vacuolar protein sorting-associated protein 51 homolog (Protein fat-free homolog)
ruditapes_c15791	Golgi vesicle transport	transport	P	Vacuolar protein sorting-associated protein 51 homolog (Protein fat-free homolog)
ruditapes_c14370	biological_process	other biological processes	P	PWWP domain-containing protein MUM1L1 (Mutated melanoma-associated antigen 1-like protein 1) (MUM1-like protein 1)
ruditapes_c16151	biological_process	other biological processes	P	Pleckstrin homology domain-containing family G member 3 (PH domain-containing family G member 3)
ruditapes_c16151	regulation of Rho protein signal transduction	signal transduction	P	Pleckstrin homology domain-containing family G member 3 (PH domain-containing family G member 3)
ruditapes_c8386	biological_process	other biological processes	P	HEPACAM family member 2 (Mitotic kinetics regulator)
ruditapes_c12397	biological_process	other biological processes	P	R3H domain-containing protein 4
ruditapes_c3095	biological_process	other biological processes	P	Nucleolar complex protein 4 homolog (NOC4 protein homolog) (NOC4-like protein) (Nucleolar complex-associated protein 4-like protein)
ruditapes_c7191	proteolysis	protein metabolism	P	Zinc metalloproteinase-disintegrin VLAIP-B (EC 3.4.24.-) (Snake venom metalloproteinase) (SVMP)
ruditapes_c7191	blood coagulation	stress response	P	Zinc metalloproteinase-disintegrin VLAIP-B (EC 3.4.24.-) (Snake venom metalloproteinase) (SVMP)
ruditapes_c7191	cell adhesion	cell adhesion	P	Zinc metalloproteinase-disintegrin VLAIP-B (EC 3.4.24.-) (Snake venom metalloproteinase) (SVMP)
ruditapes_c7191	apoptosis	death	P	Zinc metalloproteinase-disintegrin VLAIP-B (EC 3.4.24.-) (Snake venom metalloproteinase) (SVMP)
ruditapes_c22687	apoptosis	death	P	Zinc metalloproteinase-disintegrin VLAIP-A (EC 3.4.24.-) (Snake venom metalloproteinase) (SVMP) (Vipera lebetina apoptosis-inducing protein)
ruditapes_c22687	cell adhesion	cell adhesion	P	Zinc metalloproteinase-disintegrin VLAIP-A (EC 3.4.24.-) (Snake venom metalloproteinase) (SVMP) (Vipera lebetina apoptosis-inducing protein)
ruditapes_c22687	proteolysis	protein metabolism	P	Zinc metalloproteinase-disintegrin VLAIP-A (EC 3.4.24.-) (Snake venom metalloproteinase) (SVMP) (Vipera lebetina apoptosis-inducing protein)
ruditapes_c18186	ATP catabolic process	other metabolic processes	P	Probable cation-transporting ATPase 13A4 (EC 3.6.3.-) (P5-ATPase isoform 4)
ruditapes_c18186	ATP biosynthetic process	other metabolic processes	P	Probable cation-transporting ATPase 13A4 (EC 3.6.3.-) (P5-ATPase isoform 4)
ruditapes_c18186	cation transport	transport	P	Probable cation-transporting ATPase 13A4 (EC 3.6.3.-) (P5-ATPase isoform 4)
ruditapes2_c1292	protein amino acid phosphorylation	protein metabolism	P	Dual serine/threonine and tyrosine protein kinase (EC 2.7.12.1) (Dusty protein kinase) (Dusty PK) (Receptor-interacting serine/threonine-protein kinase 5)
ruditapes2_c1292	phosphorylation	other metabolic processes	P	Dual serine/threonine and tyrosine protein kinase (EC 2.7.12.1) (Dusty protein kinase) (Dusty PK) (Receptor-interacting serine/threonine-protein kinase 5)
ruditapes_c27432	methylation	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c27432	mRNA capping	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c27432	metabolic process	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c27432	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c27432	mRNA processing	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c1860	transmembrane ion transport	transport	P	Solute carrier family 22 member 6 (Organic anion transporter 1) (Renal organic anion transporter 1)
ruditapes_c1860	transmembrane transport	transport	P	Solute carrier family 22 member 6 (Organic anion transporter 1) (Renal organic anion transporter 1)
ruditapes_c25146	metabolic process	other metabolic processes	P	Nonribosomal peptide synthetase 13 (EC 6.3.2.-) (Brevianamide F synthase)
ruditapes_c21789	ribosome biogenesis	other biological processes	P	Nucleolar protein 12
ruditapes_c21789	rRNA processing	RNA metabolism	P	Nucleolar protein 12
ruditapes_c6927	mRNA processing	RNA metabolism	P	Protein cft1 (Cleavage factor two protein 1)
ruditapes2_c1116	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 1 (PPIase) (EC 5.2.1.8) (Rotamase)
ruditapes2_c1116	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 1 (PPIase) (EC 5.2.1.8) (Rotamase)
ruditapes2_lrc2442	metabolic process	other metabolic processes	P	Nonribosomal peptide synthetase 4 (EC 6.3.2.-) (Siderophore peptide synthase D)
ruditapes_c3903	intracellular protein transport	transport	P	GPI inositol-deacylase (EC 3.1.-.-)
ruditapes_c3903	GPI anchor metabolic process	other metabolic processes	P	GPI inositol-deacylase (EC 3.1.-.-)
ruditapes_c3903	protein transport	transport	P	GPI inositol-deacylase (EC 3.1.-.-)
ruditapes_c3903	transport	transport	P	GPI inositol-deacylase (EC 3.1.-.-)
ruditapes_c21271	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14)
ruditapes_c21271	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14)
ruditapes_c21271	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14)
ruditapes_c16174	mRNA processing	RNA metabolism	P	PAB-dependent poly(A)-specific ribonuclease subunit pan2 (EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease)
ruditapes_c16174	ubiquitin-dependent protein catabolic process	protein metabolism	P	PAB-dependent poly(A)-specific ribonuclease subunit pan2 (EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease)
ruditapes_c19357	oxidation reduction	other metabolic processes	P	Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPD) (IMPDH) (EC 1.1.1.205)
ruditapes_c28419	rRNA processing	RNA metabolism	P	Polynucleotide 5'-hydroxyl-kinase grc3 (EC 2.7.1.-)
ruditapes_c28419	phosphorylation	other metabolic processes	P	Polynucleotide 5'-hydroxyl-kinase grc3 (EC 2.7.1.-)
ruditapes_c30165	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase subunit trm82 (Transfer RNA methyltransferase 82)
ruditapes_c11674	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10
ruditapes_c11674	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 10
ruditapes_c21909	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes_c21909	transport	transport	P	Autophagy-related protein 2
ruditapes_c21909	protein transport	transport	P	Autophagy-related protein 2
ruditapes_c15916	transport	transport	P	Autophagy-related protein 9
ruditapes_c15916	autophagy	other metabolic processes	P	Autophagy-related protein 9
ruditapes_c15916	protein transport	transport	P	Autophagy-related protein 9
ruditapes_c7244	protein folding	protein metabolism	P	FK506-binding protein 1A (FKBP) (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rapamycin-binding protein)
ruditapes_c7244	protein peptidyl-prolyl isomerization	protein metabolism	P	FK506-binding protein 1A (FKBP) (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rapamycin-binding protein)
ruditapes_s39500	metabolic process	other metabolic processes	P	Nonribosomal peptide synthetase 12 (EC 6.3.2.-)
ruditapes_c11440	sterol biosynthetic process	other metabolic processes	P	NADPH--cytochrome P450 reductase (CPR) (P450R) (EC 1.6.2.4)
ruditapes_c11440	steroid biosynthetic process	other metabolic processes	P	NADPH--cytochrome P450 reductase (CPR) (P450R) (EC 1.6.2.4)
ruditapes_c11440	oxidation reduction	other metabolic processes	P	NADPH--cytochrome P450 reductase (CPR) (P450R) (EC 1.6.2.4)
ruditapes_c11440	lipid biosynthetic process	other metabolic processes	P	NADPH--cytochrome P450 reductase (CPR) (P450R) (EC 1.6.2.4)
ruditapes_c14597	thiamin biosynthetic process	other metabolic processes	P	Thiamine thiazole synthase (Thiazole biosynthetic enzyme)
ruditapes_lrc31735	histone lysine methylation	protein metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-4 specific (EC 2.1.1.43) (COMPASS component set1) (SET domain-containing protein 1)"
ruditapes_lrc31735	histone lysine methylation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-4 specific (EC 2.1.1.43) (COMPASS component set1) (SET domain-containing protein 1)"
ruditapes_lrc31735	chromatin modification	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-4 specific (EC 2.1.1.43) (COMPASS component set1) (SET domain-containing protein 1)"
ruditapes_lrc31735	methylation	other metabolic processes	P	"Histone-lysine N-methyltransferase, H3 lysine-4 specific (EC 2.1.1.43) (COMPASS component set1) (SET domain-containing protein 1)"
ruditapes_c5527	proteolysis	protein metabolism	P	Mitochondrial presequence protease (EC 3.4.24.-)
ruditapes_c17581	transport	transport	P	Endoplasmic reticulum vesicle protein 25
ruditapes_c17581	protein transport	transport	P	Endoplasmic reticulum vesicle protein 25
ruditapes_c17581	vesicle-mediated transport	transport	P	Endoplasmic reticulum vesicle protein 25
ruditapes_c214	metabolic process	other metabolic processes	P	Nonribosomal peptide synthetase 1 (EC 6.3.2.-)
ruditapes_c18383	metabolic process	other metabolic processes	P	Nonribosomal peptide synthetase 1 (EC 6.3.2.-)
ruditapes_c18369	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 25 (U3 snoRNA-associated protein 25) (U three protein 25)
ruditapes_c18369	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 25 (U3 snoRNA-associated protein 25) (U three protein 25)
ruditapes_c11650	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase tel1 (EC 2.7.11.1) (ATM homolog) (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1)
ruditapes_c11650	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase tel1 (EC 2.7.11.1) (ATM homolog) (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1)
ruditapes_c11650	chromatin modification	cell organization and biogenesis	P	Serine/threonine-protein kinase tel1 (EC 2.7.11.1) (ATM homolog) (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1)
ruditapes_c11650	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase tel1 (EC 2.7.11.1) (ATM homolog) (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1)
ruditapes_c11650	DNA repair	stress response	P	Serine/threonine-protein kinase tel1 (EC 2.7.11.1) (ATM homolog) (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1)
ruditapes_c24678	metabolic process	other metabolic processes	P	Nonribosomal peptide synthetase 8 (EC 6.3.2.-)
ruditapes_c24678	lipid metabolic process	other metabolic processes	P	Nonribosomal peptide synthetase 8 (EC 6.3.2.-)
ruditapes_c26861	lipid metabolic process	other metabolic processes	P	Nonribosomal peptide synthetase 8 (EC 6.3.2.-)
ruditapes_c26861	metabolic process	other metabolic processes	P	Nonribosomal peptide synthetase 8 (EC 6.3.2.-)
ruditapes_c10495	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12)
ruditapes_c10495	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12)
ruditapes_c10495	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12)
ruditapes_c4892	rRNA processing	RNA metabolism	P	RNA exonuclease 3 (EC 3.1.-.-)
ruditapes_c14531	DNA repair	stress response	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c14531	DNA repair	DNA metabolism	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c14531	meiosis	cell cycle and proliferation	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c14531	DNA recombination	DNA metabolism	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c14531	DNA metabolic process	DNA metabolism	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c14531	response to DNA damage stimulus	stress response	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c16253	protein targeting to mitochondrion	transport	P	Mitochondrial import inner membrane translocase subunit tim13
ruditapes_c16253	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit tim13
ruditapes_c16253	transport	transport	P	Mitochondrial import inner membrane translocase subunit tim13
ruditapes_c16253	protein transport	transport	P	Mitochondrial import inner membrane translocase subunit tim13
ruditapes_c16253	protein import into mitochondrial inner membrane	transport	P	Mitochondrial import inner membrane translocase subunit tim13
ruditapes_c16253	protein import into mitochondrial inner membrane	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit tim13
ruditapes_c12108	JAK-STAT cascade	signal transduction	P	Ran-binding proteins 9/10 homolog (Ran-binding protein M)
ruditapes_c12108	germ-line stem-cell niche maintenance	other biological processes	P	Ran-binding proteins 9/10 homolog (Ran-binding protein M)
ruditapes_c12108	negative regulation of cell adhesion	cell adhesion	P	Ran-binding proteins 9/10 homolog (Ran-binding protein M)
ruditapes_c23530	lipid metabolic process	other metabolic processes	P	Sphingomyelin phosphodiesterase D LarSicTox-alphaIB1ai (Sphingomyelin phosphodiesterase D 3) (SMD 3) (SMase D 3) (Sphingomyelinase D 3) (EC 3.1.4.41) (Fragment)
ruditapes_c23530	cytolysis	death	P	Sphingomyelin phosphodiesterase D LarSicTox-alphaIB1ai (Sphingomyelin phosphodiesterase D 3) (SMD 3) (SMase D 3) (Sphingomyelinase D 3) (EC 3.1.4.41) (Fragment)
ruditapes_c18497	regulation of protein transport	transport	P	Fibronectin type III domain-containing protein 1 (Activation-associated cDNA protein) (Expressed in synovial lining protein)
ruditapes_c18497	positive regulation of cardiac muscle cell apoptosis	death	P	Fibronectin type III domain-containing protein 1 (Activation-associated cDNA protein) (Expressed in synovial lining protein)
ruditapes_c18497	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Fibronectin type III domain-containing protein 1 (Activation-associated cDNA protein) (Expressed in synovial lining protein)
ruditapes2_c3240	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes_c12047	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes_c19202	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes2_c1744	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes_c7401	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes_c28960	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes_c8541	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes_c29464	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes_c18927	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes2_c2229	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes2_c2328	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes_c13530	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes_c11742	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes_c15166	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes2_c3454	biological_process	other biological processes	P	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1qTNF11)
ruditapes_c11067	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (Acyl-PO4 G3P acyltransferase) (Acyl-phosphate--glycerol-3-phosphate acyltransferase) (G3P acyltransferase) (GPAT) (EC 2.3.1.n3) (Lysophosphatidic acid synthase) (LPA synthase)
ruditapes_c31482	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c31482	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c31482	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c31482	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c31482	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c28381	pollen development	developmental processes	P	Tetraketide alpha-pyrone reductase 1 (EC 1.1.1.-) (Protein DIHYDROFLAVONOL 4-REDUCTASE-LIKE 1)
ruditapes_c28381	seed development	other biological processes	P	Tetraketide alpha-pyrone reductase 1 (EC 1.1.1.-) (Protein DIHYDROFLAVONOL 4-REDUCTASE-LIKE 1)
ruditapes_c28381	pollen exine formation	developmental processes	P	Tetraketide alpha-pyrone reductase 1 (EC 1.1.1.-) (Protein DIHYDROFLAVONOL 4-REDUCTASE-LIKE 1)
ruditapes_c28381	pollen exine formation	cell organization and biogenesis	P	Tetraketide alpha-pyrone reductase 1 (EC 1.1.1.-) (Protein DIHYDROFLAVONOL 4-REDUCTASE-LIKE 1)
ruditapes_c28381	cellular metabolic process	other metabolic processes	P	Tetraketide alpha-pyrone reductase 1 (EC 1.1.1.-) (Protein DIHYDROFLAVONOL 4-REDUCTASE-LIKE 1)
ruditapes_c28381	sporopollenin biosynthetic process	other metabolic processes	P	Tetraketide alpha-pyrone reductase 1 (EC 1.1.1.-) (Protein DIHYDROFLAVONOL 4-REDUCTASE-LIKE 1)
ruditapes_c28381	sporopollenin biosynthetic process	developmental processes	P	Tetraketide alpha-pyrone reductase 1 (EC 1.1.1.-) (Protein DIHYDROFLAVONOL 4-REDUCTASE-LIKE 1)
ruditapes_c28381	sporopollenin biosynthetic process	cell organization and biogenesis	P	Tetraketide alpha-pyrone reductase 1 (EC 1.1.1.-) (Protein DIHYDROFLAVONOL 4-REDUCTASE-LIKE 1)
ruditapes_c26452	metabolic process	other metabolic processes	P	Peptidase M20 domain-containing protein 2 (Aminoacylase-1-like protein 2)
ruditapes_lrc37378	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_lrc37378	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_lrc37378	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes2_lrc5087	phospholipid biosynthetic process	other metabolic processes	P	Lysophosphatidylcholine acyltransferase 2 (LPC acyltransferase 2) (LPCAT-2) (LysoPC acyltransferase 2) (EC 2.3.1.-) (1-acylglycerophosphocholine O-acyltransferase) (EC 2.3.1.23) (1-alkylglycerophosphocholine O-acetyltransferase) (EC 2.3.1.67) (Acetyl-CoA:lyso-platelet-activating factor acetyltransferase) (Acetyl-CoA:lyso-PAF acetyltransferase) (Lyso-PAF acetyltransferase) (LysoPAFAT) (Acyltransferase-like 1)
ruditapes2_lrc5087	metabolic process	other metabolic processes	P	Lysophosphatidylcholine acyltransferase 2 (LPC acyltransferase 2) (LPCAT-2) (LysoPC acyltransferase 2) (EC 2.3.1.-) (1-acylglycerophosphocholine O-acyltransferase) (EC 2.3.1.23) (1-alkylglycerophosphocholine O-acetyltransferase) (EC 2.3.1.67) (Acetyl-CoA:lyso-platelet-activating factor acetyltransferase) (Acetyl-CoA:lyso-PAF acetyltransferase) (Lyso-PAF acetyltransferase) (LysoPAFAT) (Acyltransferase-like 1)
ruditapes_c30825	translation	protein metabolism	P	30S ribosomal protein S5
ruditapes_c13808	ion transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c13808	transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c13808	proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c13808	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c13808	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c13808	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c20871	response to antibiotic	other biological processes	P	Probable arabinosyltransferase A (EC 2.4.2.-)
ruditapes_c20871	cell wall organization	cell organization and biogenesis	P	Probable arabinosyltransferase A (EC 2.4.2.-)
ruditapes_c20871	peptidoglycan biosynthetic process	other metabolic processes	P	Probable arabinosyltransferase A (EC 2.4.2.-)
ruditapes_c15766	transport	transport	P	Importin subunit alpha-6 (Karyopherin subunit alpha-5)
ruditapes_c15766	protein transport	transport	P	Importin subunit alpha-6 (Karyopherin subunit alpha-5)
ruditapes_c15766	protein import into nucleus	transport	P	Importin subunit alpha-6 (Karyopherin subunit alpha-5)
ruditapes_c15351	transport	transport	P	Monocarboxylate transporter 12-B (MCT 12-B) (Solute carrier family 16 member 12-B)
ruditapes_c17110	transmembrane transport	transport	P	Monocarboxylate transporter 12-B (MCT 12-B) (Solute carrier family 16 member 12-B)
ruditapes_c15351	transmembrane transport	transport	P	Monocarboxylate transporter 12-B (MCT 12-B) (Solute carrier family 16 member 12-B)
ruditapes_c17110	transport	transport	P	Monocarboxylate transporter 12-B (MCT 12-B) (Solute carrier family 16 member 12-B)
ruditapes_lrc36614	cellular response to stress	stress response	P	Mitochondria-eating protein (Spermatogenesis-associated protein 18)
ruditapes_s40303	response to DNA damage stimulus	stress response	P	Mitochondria-eating protein (Spermatogenesis-associated protein 18)
ruditapes2_c3890	response to DNA damage stimulus	stress response	P	Mitochondria-eating protein (Spermatogenesis-associated protein 18)
ruditapes_lrc36614	response to DNA damage stimulus	stress response	P	Mitochondria-eating protein (Spermatogenesis-associated protein 18)
ruditapes_s40303	cellular response to stress	stress response	P	Mitochondria-eating protein (Spermatogenesis-associated protein 18)
ruditapes_lrc36889	cellular response to stress	stress response	P	Mitochondria-eating protein (Spermatogenesis-associated protein 18)
ruditapes2_c3890	cellular response to stress	stress response	P	Mitochondria-eating protein (Spermatogenesis-associated protein 18)
ruditapes_lrc36889	response to DNA damage stimulus	stress response	P	Mitochondria-eating protein (Spermatogenesis-associated protein 18)
ruditapes_c11930	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (EC 5.2.1.8) (Parvulin-14) (Par14) (Peptidyl-prolyl cis-trans isomerase Pin4) (PPIase Pin4) (Rotamase Pin4)
ruditapes_c11930	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (EC 5.2.1.8) (Parvulin-14) (Par14) (Peptidyl-prolyl cis-trans isomerase Pin4) (PPIase Pin4) (Rotamase Pin4)
ruditapes_c16752	methylation	other metabolic processes	P	Probable thiopurine S-methyltransferase (Thiopurine methyltransferase) (EC 2.1.1.67)
ruditapes_c16752	metabolic process	other metabolic processes	P	Probable thiopurine S-methyltransferase (Thiopurine methyltransferase) (EC 2.1.1.67)
ruditapes_c30164	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 574
ruditapes_c30164	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 574
ruditapes_lrc26380	DNA replication	DNA metabolism	P	Ribonucleoside-diphosphate reductase subunit beta nrdF2 (EC 1.17.4.1) (Ribonucleoside-diphosphate reductase nrdF2) (Ribonucleotide reductase R2-2 small subunit)
ruditapes_lrc26380	deoxyribonucleotide biosynthetic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit beta nrdF2 (EC 1.17.4.1) (Ribonucleoside-diphosphate reductase nrdF2) (Ribonucleotide reductase R2-2 small subunit)
ruditapes_lrc26380	growth	other biological processes	P	Ribonucleoside-diphosphate reductase subunit beta nrdF2 (EC 1.17.4.1) (Ribonucleoside-diphosphate reductase nrdF2) (Ribonucleotide reductase R2-2 small subunit)
ruditapes_lrc26380	deoxyribonucleoside diphosphate metabolic process	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit beta nrdF2 (EC 1.17.4.1) (Ribonucleoside-diphosphate reductase nrdF2) (Ribonucleotide reductase R2-2 small subunit)
ruditapes_lrc26380	oxidation reduction	other metabolic processes	P	Ribonucleoside-diphosphate reductase subunit beta nrdF2 (EC 1.17.4.1) (Ribonucleoside-diphosphate reductase nrdF2) (Ribonucleotide reductase R2-2 small subunit)
ruditapes2_c2616	DNA recombination	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes2_c2616	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes2_c2616	cell cycle	cell cycle and proliferation	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes2_c2616	DNA repair	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes2_c2616	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes2_c2616	DNA ligation during DNA repair	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes2_c2616	DNA ligation during DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes2_c2616	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes2_c2616	cell division	other biological processes	P	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
ruditapes_c7551	biological_process	other biological processes	P	Leucine-rich repeat-containing protein 47
ruditapes_c28595	carbohydrate metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase Rv3401/MT3509 (EC 3.2.1.-)
ruditapes_c28595	metabolic process	other metabolic processes	P	Uncharacterized glycosyl hydrolase Rv3401/MT3509 (EC 3.2.1.-)
ruditapes_c16270	methanogenesis	other metabolic processes	P	"5,10-methylenetetrahydromethanopterin reductase (EC 1.5.99.11) (Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase) (Methylene-H(4)MPT reductase)"
ruditapes_c16270	oxidation reduction	other metabolic processes	P	"5,10-methylenetetrahydromethanopterin reductase (EC 1.5.99.11) (Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase) (Methylene-H(4)MPT reductase)"
ruditapes_c16270	one-carbon compound metabolic process	other metabolic processes	P	"5,10-methylenetetrahydromethanopterin reductase (EC 1.5.99.11) (Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase) (Methylene-H(4)MPT reductase)"
ruditapes_c15765	vestibular receptor cell development	developmental processes	P	Glutaredoxin domain-containing cysteine-rich protein 1
ruditapes_c15765	inner ear receptor stereocilium organization	developmental processes	P	Glutaredoxin domain-containing cysteine-rich protein 1
ruditapes_c15765	inner ear receptor stereocilium organization	cell organization and biogenesis	P	Glutaredoxin domain-containing cysteine-rich protein 1
ruditapes_c15765	negative regulation of phosphatase activity	other metabolic processes	P	Glutaredoxin domain-containing cysteine-rich protein 1
ruditapes_c15765	inner ear receptor cell development	developmental processes	P	Glutaredoxin domain-containing cysteine-rich protein 1
ruditapes_c15765	cell redox homeostasis	other biological processes	P	Glutaredoxin domain-containing cysteine-rich protein 1
ruditapes_c15765	sensory perception of sound	other biological processes	P	Glutaredoxin domain-containing cysteine-rich protein 1
ruditapes_c15765	post-embryonic organ morphogenesis	developmental processes	P	Glutaredoxin domain-containing cysteine-rich protein 1
ruditapes_c15765	inner ear development	developmental processes	P	Glutaredoxin domain-containing cysteine-rich protein 1
ruditapes_c15765	auditory receptor cell differentiation	developmental processes	P	Glutaredoxin domain-containing cysteine-rich protein 1
ruditapes_c21041	response to antibiotic	other biological processes	P	Beta-lactamase CARB-4 (EC 3.5.2.6) (Carbenicillinase 4)
ruditapes_c21041	beta-lactam antibiotic catabolic process	other metabolic processes	P	Beta-lactamase CARB-4 (EC 3.5.2.6) (Carbenicillinase 4)
ruditapes_c20339	oxidation reduction	other metabolic processes	P	L-aspartate oxidase (LASPO) (EC 1.4.3.16) (Quinolinate synthase B)
ruditapes_c20339	NAD biosynthetic process	other metabolic processes	P	L-aspartate oxidase (LASPO) (EC 1.4.3.16) (Quinolinate synthase B)
ruditapes_c20339	pyridine nucleotide biosynthetic process	other metabolic processes	P	L-aspartate oxidase (LASPO) (EC 1.4.3.16) (Quinolinate synthase B)
ruditapes_c31695	oxidation reduction	other metabolic processes	P	Tungsten-containing aldehyde ferredoxin oxidoreductase (EC 1.2.7.5)
ruditapes_c5026	RNA 3'-end processing	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (EhPAP) (Polynucleotide adenylyltransferase)
ruditapes_c5026	RNA polyadenylation	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (EhPAP) (Polynucleotide adenylyltransferase)
ruditapes_c5026	"transcription, DNA-dependent"	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (EhPAP) (Polynucleotide adenylyltransferase)
ruditapes_c5026	mRNA processing	RNA metabolism	P	Poly(A) polymerase (PAP) (EC 2.7.7.19) (EhPAP) (Polynucleotide adenylyltransferase)
ruditapes_c15168	protein transport	transport	P	Autophagy-related protein 9
ruditapes_c15168	transport	transport	P	Autophagy-related protein 9
ruditapes_c15168	autophagy	other metabolic processes	P	Autophagy-related protein 9
ruditapes_c27891	nitrogen fixation	other metabolic processes	P	Homocitrate synthase (EC 2.3.3.14)
ruditapes_c27891	carboxylic acid metabolic process	other metabolic processes	P	Homocitrate synthase (EC 2.3.3.14)
ruditapes_c27891	cofactor biosynthetic process	other metabolic processes	P	Homocitrate synthase (EC 2.3.3.14)
ruditapes_c841	ciliary or flagellar motility	other biological processes	P	Flagellar L-ring protein (Basal body L-ring protein)
ruditapes_c8878	modulation by symbiont of host defense-related programmed cell death	stress response	P	Hypersensitivity response secretion protein HrcR
ruditapes_c8878	modulation by symbiont of host defense-related programmed cell death	death	P	Hypersensitivity response secretion protein HrcR
ruditapes_c8878	protein secretion	transport	P	Hypersensitivity response secretion protein HrcR
ruditapes_c8878	protein transport	transport	P	Hypersensitivity response secretion protein HrcR
ruditapes_c14508	protein transport	transport	P	Selenium-binding protein 1-A
ruditapes_c14508	transport	transport	P	Selenium-binding protein 1-A
ruditapes_c6962	folic acid and derivative biosynthetic process	other metabolic processes	P	Methenyltetrahydrofolate synthase domain-containing protein
ruditapes2_lrc3999	positive regulation of GTPase activity	other biological processes	P	Rho GTPase-activating protein 29 (PTPL1-associated RhoGAP protein 1) (Rho-type GTPase-activating protein 29)
ruditapes2_lrc3999	Rho protein signal transduction	signal transduction	P	Rho GTPase-activating protein 29 (PTPL1-associated RhoGAP protein 1) (Rho-type GTPase-activating protein 29)
ruditapes2_lrc3999	positive regulation of Rho GTPase activity	signal transduction	P	Rho GTPase-activating protein 29 (PTPL1-associated RhoGAP protein 1) (Rho-type GTPase-activating protein 29)
ruditapes2_lrc3999	small GTPase mediated signal transduction	signal transduction	P	Rho GTPase-activating protein 29 (PTPL1-associated RhoGAP protein 1) (Rho-type GTPase-activating protein 29)
ruditapes2_lrc3999	regulation of small GTPase mediated signal transduction	signal transduction	P	Rho GTPase-activating protein 29 (PTPL1-associated RhoGAP protein 1) (Rho-type GTPase-activating protein 29)
ruditapes2_lrc3999	signal transduction	signal transduction	P	Rho GTPase-activating protein 29 (PTPL1-associated RhoGAP protein 1) (Rho-type GTPase-activating protein 29)
ruditapes_lrc28946	carotenoid biosynthetic process	other metabolic processes	P	"Prolycopene isomerase 2, chloroplastic (CrtISO2) (EC 5.2.1.13) (Carotenoid isomerase 2) (OcrtISO24)"
ruditapes_c27108	transport	transport	P	Cytochrome c-type protein NapC
ruditapes_c27108	electron transport chain	other metabolic processes	P	Cytochrome c-type protein NapC
ruditapes_c27108	denitrification pathway	other metabolic processes	P	Cytochrome c-type protein NapC
ruditapes_c14806	oxidation reduction	other metabolic processes	P	Uncharacterized short-chain type dehydrogenase/reductase y4vI (EC 1.-.-.-)
ruditapes_c14806	metabolic process	other metabolic processes	P	Uncharacterized short-chain type dehydrogenase/reductase y4vI (EC 1.-.-.-)
ruditapes_c15942	metabolic process	other metabolic processes	P	(S)-2-haloacid dehalogenase (EC 3.8.1.2) (2-haloalkanoic acid dehalogenase) (Halocarboxylic acid halidohydrolase) (L-2-haloacid dehalogenase) (L-DEX)
ruditapes_c8675	DNA restriction-modification system	DNA metabolism	P	Modification methylase SalI (M.SalI) (EC 2.1.1.72) (Adenine-specific methyltransferase SalI)
ruditapes_c8675	methylation	other metabolic processes	P	Modification methylase SalI (M.SalI) (EC 2.1.1.72) (Adenine-specific methyltransferase SalI)
ruditapes_c8675	DNA methylation on adenine	DNA metabolism	P	Modification methylase SalI (M.SalI) (EC 2.1.1.72) (Adenine-specific methyltransferase SalI)
ruditapes_c23208	transport	transport	P	Metal ABC transporter substrate-binding lipoprotein
ruditapes_c23208	metal ion transport	transport	P	Metal ABC transporter substrate-binding lipoprotein
ruditapes_c23208	cell adhesion	cell adhesion	P	Metal ABC transporter substrate-binding lipoprotein
ruditapes_c26710	induction of apoptosis by oxidative stress	death	P	Quinone oxidoreductase PIG3 (EC 1.-.-.-) (Tumor protein p53-inducible protein 3) (p53-induced gene 3 protein)
ruditapes_c26710	oxidation reduction	other metabolic processes	P	Quinone oxidoreductase PIG3 (EC 1.-.-.-) (Tumor protein p53-inducible protein 3) (p53-induced gene 3 protein)
ruditapes_c26710	NADP metabolic process	other metabolic processes	P	Quinone oxidoreductase PIG3 (EC 1.-.-.-) (Tumor protein p53-inducible protein 3) (p53-induced gene 3 protein)
ruditapes2_c3171	response to virus	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c21805	response to virus	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c15709	response to virus	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c19942	response to virus	other biological processes	P	Interferon-induced protein 44-like
ruditapes2_c3171	immune response	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c25792	immune response	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c10412	response to virus	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c10412	immune response	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c25792	response to virus	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c9604	immune response	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c19825	response to virus	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c9604	response to virus	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c21805	immune response	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c19825	immune response	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c19942	immune response	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c15709	immune response	other biological processes	P	Interferon-induced protein 44-like
ruditapes_c1336	RNA splicing	RNA metabolism	P	U4/U6.U5 tri-snRNP-associated protein 2 (Inactive ubiquitin-specific peptidase 39) (SAD1 homolog) (U4/U6.U5 tri-snRNP-associated 65 kDa protein) (65K)
ruditapes_c1336	ubiquitin-dependent protein catabolic process	protein metabolism	P	U4/U6.U5 tri-snRNP-associated protein 2 (Inactive ubiquitin-specific peptidase 39) (SAD1 homolog) (U4/U6.U5 tri-snRNP-associated 65 kDa protein) (65K)
ruditapes_c1336	mRNA processing	RNA metabolism	P	U4/U6.U5 tri-snRNP-associated protein 2 (Inactive ubiquitin-specific peptidase 39) (SAD1 homolog) (U4/U6.U5 tri-snRNP-associated 65 kDa protein) (65K)
ruditapes_c1336	spliceosome assembly	RNA metabolism	P	U4/U6.U5 tri-snRNP-associated protein 2 (Inactive ubiquitin-specific peptidase 39) (SAD1 homolog) (U4/U6.U5 tri-snRNP-associated 65 kDa protein) (65K)
ruditapes_c1336	spliceosome assembly	cell organization and biogenesis	P	U4/U6.U5 tri-snRNP-associated protein 2 (Inactive ubiquitin-specific peptidase 39) (SAD1 homolog) (U4/U6.U5 tri-snRNP-associated 65 kDa protein) (65K)
ruditapes_c31821	DNA integration	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	metabolic process	other metabolic processes	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	"transposition, DNA-mediated"	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	DNA integration	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	metabolic process	other metabolic processes	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	"DNA catabolic process, endonucleolytic"	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	DNA double-strand break processing	stress response	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	DNA double-strand break processing	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	response to DNA damage stimulus	stress response	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	response to DNA damage stimulus	stress response	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	DNA double-strand break processing	stress response	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	DNA double-strand break processing	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	DNA repair	stress response	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	DNA repair	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	DNA repair	stress response	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	DNA repair	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	"DNA catabolic process, endonucleolytic"	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	DNA repair	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	"transposition, DNA-mediated"	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	DNA double-strand break processing	stress response	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	DNA double-strand break processing	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	"DNA catabolic process, endonucleolytic"	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	metabolic process	other metabolic processes	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	DNA repair	stress response	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c31821	"transposition, DNA-mediated"	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	DNA integration	DNA metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c21462	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c8304	response to DNA damage stimulus	stress response	P	Histone-lysine N-methyltransferase SETMAR (SET domain and mariner transposase fusion gene-containing protein) (HsMar1) (Metnase) [Includes: Histone-lysine N-methyltransferase (EC 2.1.1.43); Mariner transposase Hsmar1 (EC 3.1.-.-)]
ruditapes_c15352	lipid metabolic process	other metabolic processes	P	Phospholipase A1 member A (EC 3.1.1.-) (Phosphatidylserine-specific phospholipase A1) (PS-PLA1)
ruditapes_c15352	lipid catabolic process	other metabolic processes	P	Phospholipase A1 member A (EC 3.1.1.-) (Phosphatidylserine-specific phospholipase A1) (PS-PLA1)
ruditapes_c15352	phosphatidylserine metabolic process	other metabolic processes	P	Phospholipase A1 member A (EC 3.1.1.-) (Phosphatidylserine-specific phospholipase A1) (PS-PLA1)
ruditapes_c13335	transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_c13335	ATP catabolic process	other metabolic processes	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_c13335	amino acid transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_c13335	methionine transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_c29740	phosphorylation	other metabolic processes	P	"Probable NAD kinase 2, chloroplastic (EC 2.7.1.23)"
ruditapes_c29740	metabolic process	other metabolic processes	P	"Probable NAD kinase 2, chloroplastic (EC 2.7.1.23)"
ruditapes_c13742	intracellular protein transport	transport	P	Coatomer subunit beta-1 (Beta-coat protein 1) (Beta-COP 1)
ruditapes_c13742	vesicle-mediated transport	transport	P	Coatomer subunit beta-1 (Beta-coat protein 1) (Beta-COP 1)
ruditapes_c13742	protein transport	transport	P	Coatomer subunit beta-1 (Beta-coat protein 1) (Beta-COP 1)
ruditapes_c13742	transport	transport	P	Coatomer subunit beta-1 (Beta-coat protein 1) (Beta-COP 1)
ruditapes_c25065	negative regulation of peptidase activity	other biological processes	P	Putative serpin-Z6A (OrysaZ6a)
ruditapes_c17105	skin development	developmental processes	P	Retroviral-like aspartic protease 1 (EC 3.4.23.-) (Skin-specific retroviral-like aspartic protease) (SASPase) (Skin aspartic protease) (TPA-inducible aspartic proteinase-like protein) (TAPS)
ruditapes_c17105	proteolysis	protein metabolism	P	Retroviral-like aspartic protease 1 (EC 3.4.23.-) (Skin-specific retroviral-like aspartic protease) (SASPase) (Skin aspartic protease) (TPA-inducible aspartic proteinase-like protein) (TAPS)
ruditapes_c17105	protein processing	protein metabolism	P	Retroviral-like aspartic protease 1 (EC 3.4.23.-) (Skin-specific retroviral-like aspartic protease) (SASPase) (Skin aspartic protease) (TPA-inducible aspartic proteinase-like protein) (TAPS)
ruditapes_c11580	cytolysis	death	P	Hemolysin C
ruditapes_lrc34293	antibiotic biosynthetic process	other metabolic processes	P	Lincomycin biosynthesis protein LmbN
ruditapes_lrc34293	carbohydrate metabolic process	other metabolic processes	P	Lincomycin biosynthesis protein LmbN
ruditapes_c13267	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Sucrose operon repressor (Scr operon regulatory protein)
ruditapes_c13267	"transcription, DNA-dependent"	RNA metabolism	P	Sucrose operon repressor (Scr operon regulatory protein)
ruditapes_c16635	metabolic process	other metabolic processes	P	Chitobiase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c16635	chitin catabolic process	other metabolic processes	P	Chitobiase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c16635	carbohydrate metabolic process	other metabolic processes	P	Chitobiase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c16635	polysaccharide catabolic process	other metabolic processes	P	Chitobiase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_s38596	sulfate assimilation	other metabolic processes	P	Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT)
ruditapes_c16512	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase DDB
ruditapes_c16512	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase DDB
ruditapes_c28328	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 45 (dipks45) (EC 2.3.1.-)
ruditapes_c28328	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 45 (dipks45) (EC 2.3.1.-)
ruditapes_c28328	metabolic process	other metabolic processes	P	Probable polyketide synthase 45 (dipks45) (EC 2.3.1.-)
ruditapes2_c1117	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase dyrk2 (EC 2.7.12.1) (Dual specificity tyrosine-phosphorylation-regulated kinase 2)
ruditapes2_c1117	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase dyrk2 (EC 2.7.12.1) (Dual specificity tyrosine-phosphorylation-regulated kinase 2)
ruditapes_c28702	transport	transport	P	ABC transporter A family member 3 (ABC transporter ABCA.3)
ruditapes_c28702	ATP catabolic process	other metabolic processes	P	ABC transporter A family member 3 (ABC transporter ABCA.3)
ruditapes_c26195	transmembrane transport	transport	P	ABC transporter B family member 1 (ABC transporter ABCB.1)
ruditapes_c26195	chemotaxis	other biological processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1)
ruditapes_c18750	transport	transport	P	ABC transporter B family member 1 (ABC transporter ABCB.1)
ruditapes_c18750	ATP catabolic process	other metabolic processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1)
ruditapes_c26195	hyperosmotic response	stress response	P	ABC transporter B family member 1 (ABC transporter ABCB.1)
ruditapes_c18750	hyperosmotic response	stress response	P	ABC transporter B family member 1 (ABC transporter ABCB.1)
ruditapes_c26195	ATP catabolic process	other metabolic processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1)
ruditapes_c18750	chemotaxis	other biological processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1)
ruditapes_c18750	transmembrane transport	transport	P	ABC transporter B family member 1 (ABC transporter ABCB.1)
ruditapes_c26195	transport	transport	P	ABC transporter B family member 1 (ABC transporter ABCB.1)
ruditapes_c10612	small GTPase mediated signal transduction	signal transduction	P	GPN-loop GTPase 1 homolog (XPA-binding protein 1 homolog)
ruditapes_c27250	ion transport	transport	P	Chloride channel protein F
ruditapes_c27250	transport	transport	P	Chloride channel protein F
ruditapes_c27250	chloride transport	transport	P	Chloride channel protein F
ruditapes_c27250	regulation of transmembrane ion transport	transport	P	Chloride channel protein F
ruditapes_c27250	transmembrane transport	transport	P	Chloride channel protein F
ruditapes_c23634	protein amino acid phosphorylation	protein metabolism	P	Kinase and exchange factor for Rac B (EC 2.7.11.1) (Serine/threonine-protein kinase kxcB)
ruditapes_lrc6844	regulation of Rho protein signal transduction	signal transduction	P	Kinase and exchange factor for Rac B (EC 2.7.11.1) (Serine/threonine-protein kinase kxcB)
ruditapes_lrc6844	phosphorylation	other metabolic processes	P	Kinase and exchange factor for Rac B (EC 2.7.11.1) (Serine/threonine-protein kinase kxcB)
ruditapes_c23634	positive regulation of GTPase activity	other biological processes	P	Kinase and exchange factor for Rac B (EC 2.7.11.1) (Serine/threonine-protein kinase kxcB)
ruditapes_c23634	phosphorylation	other metabolic processes	P	Kinase and exchange factor for Rac B (EC 2.7.11.1) (Serine/threonine-protein kinase kxcB)
ruditapes_lrc6844	positive regulation of GTPase activity	other biological processes	P	Kinase and exchange factor for Rac B (EC 2.7.11.1) (Serine/threonine-protein kinase kxcB)
ruditapes_lrc6844	protein amino acid phosphorylation	protein metabolism	P	Kinase and exchange factor for Rac B (EC 2.7.11.1) (Serine/threonine-protein kinase kxcB)
ruditapes_c23634	regulation of Rho protein signal transduction	signal transduction	P	Kinase and exchange factor for Rac B (EC 2.7.11.1) (Serine/threonine-protein kinase kxcB)
ruditapes_c24960	transport	transport	P	Importin-13 homolog A
ruditapes_c24960	protein transport	transport	P	Importin-13 homolog A
ruditapes_c24960	intracellular protein transport	transport	P	Importin-13 homolog A
ruditapes_c24163	transport	transport	P	Exportin-6 (Exp6)
ruditapes_c24163	protein transport	transport	P	Exportin-6 (Exp6)
ruditapes_c24163	protein export from nucleus	transport	P	Exportin-6 (Exp6)
ruditapes_c24703	vesicle fusion	transport	P	Vesicle transport through interaction with t-SNAREs homolog 1A
ruditapes_c24703	vesicle fusion	cell organization and biogenesis	P	Vesicle transport through interaction with t-SNAREs homolog 1A
ruditapes_c24703	protein transport	transport	P	Vesicle transport through interaction with t-SNAREs homolog 1A
ruditapes_c24703	vesicle-mediated transport	transport	P	Vesicle transport through interaction with t-SNAREs homolog 1A
ruditapes_c24703	transport	transport	P	Vesicle transport through interaction with t-SNAREs homolog 1A
ruditapes_c24703	intracellular protein transport	transport	P	Vesicle transport through interaction with t-SNAREs homolog 1A
ruditapes_c12551	DNA replication	DNA metabolism	P	DNA replication licensing factor mcm5 (EC 3.6.4.12)
ruditapes_c12551	cell cycle	cell cycle and proliferation	P	DNA replication licensing factor mcm5 (EC 3.6.4.12)
ruditapes_c12551	DNA replication initiation	DNA metabolism	P	DNA replication licensing factor mcm5 (EC 3.6.4.12)
ruditapes_s35019	electron transport chain	other metabolic processes	P	"Cytochrome c1, heme protein, mitochondrial (Cytochrome c-1) (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4)"
ruditapes_s35019	transport	transport	P	"Cytochrome c1, heme protein, mitochondrial (Cytochrome c-1) (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4)"
ruditapes_c12473	transport	transport	P	Phosphatidylinositol transfer protein 4 (PtdIns transfer protein 4) (DdPITP4)
ruditapes_c15226	transcription from RNA polymerase II promoter	RNA metabolism	P	Putative mediator of RNA polymerase II transcription subunit 28 (Putative mediator complex subunit 28)
ruditapes_c15226	"transcription, DNA-dependent"	RNA metabolism	P	Putative mediator of RNA polymerase II transcription subunit 28 (Putative mediator complex subunit 28)
ruditapes_c15226	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative mediator of RNA polymerase II transcription subunit 28 (Putative mediator complex subunit 28)
ruditapes2_lrc3405	signal transduction	signal transduction	P	Probable serine/threonine-protein kinase DDB
ruditapes2_lrc3405	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase DDB
ruditapes2_lrc3405	DNA repair	stress response	P	Probable serine/threonine-protein kinase DDB
ruditapes2_lrc3405	DNA repair	DNA metabolism	P	Probable serine/threonine-protein kinase DDB
ruditapes2_lrc3405	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase DDB
ruditapes_lrc29226	vacuolar transport	transport	P	Down syndrome critical region protein 3 homolog (Vacuolar protein sorting-associated protein 26-like)
ruditapes_c11156	phosphorylation	other metabolic processes	P	Alpha-protein kinase 1 (AK1) (EC 2.7.11.-)
ruditapes_c11156	protein amino acid phosphorylation	protein metabolism	P	Alpha-protein kinase 1 (AK1) (EC 2.7.11.-)
ruditapes_c11156	regulation of ARF GTPase activity	signal transduction	P	Alpha-protein kinase 1 (AK1) (EC 2.7.11.-)
ruditapes_c14646	mitotic cell cycle checkpoint	cell cycle and proliferation	P	Mitotic checkpoint protein bub3
ruditapes_c14646	mitosis	cell cycle and proliferation	P	Mitotic checkpoint protein bub3
ruditapes_c14646	mitosis	cell organization and biogenesis	P	Mitotic checkpoint protein bub3
ruditapes_c14646	cell cycle	cell cycle and proliferation	P	Mitotic checkpoint protein bub3
ruditapes_c14646	cell division	other biological processes	P	Mitotic checkpoint protein bub3
ruditapes_c26258	dephosphorylation	other metabolic processes	P	Probable protein tyrosine phosphatase type IVA A (EC 3.1.3.48)
ruditapes_c26258	protein amino acid dephosphorylation	protein metabolism	P	Probable protein tyrosine phosphatase type IVA A (EC 3.1.3.48)
ruditapes_c11001	leading strand elongation	DNA metabolism	P	Probable replication factor C subunit 2 (Activator 1 subunit 2)
ruditapes_c11001	mismatch repair	stress response	P	Probable replication factor C subunit 2 (Activator 1 subunit 2)
ruditapes_c11001	mismatch repair	DNA metabolism	P	Probable replication factor C subunit 2 (Activator 1 subunit 2)
ruditapes_c11001	DNA replication	DNA metabolism	P	Probable replication factor C subunit 2 (Activator 1 subunit 2)
ruditapes_c16953	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase subunit AB1)"
ruditapes_c16953	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase subunit AB1)"
ruditapes_c16953	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase subunit AB1)"
ruditapes_c16953	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase subunit AB1)"
ruditapes2_lrc5343	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_s38306	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc32574	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc10998	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_s38306	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes2_lrc4820	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc16722	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc34763	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc33687	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes2_lrc3147	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc33687	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc33636	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc21183	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc33636	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc21183	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes2_lrc3147	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc16722	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc34763	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes2_lrc3147	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc33687	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc34763	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_s38753	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_s35457	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc34351	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc32574	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc21183	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc33636	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc34351	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_s35457	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes2_lrc5343	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_s38753	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes2_lrc5343	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_s35457	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes2_lrc4820	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc32282	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc16722	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_s38753	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc34351	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes2_lrc4820	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc32282	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_s38306	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc10998	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc32574	metabolic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc32282	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_lrc10998	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 41 (dipks41) (EC 2.3.1.-)
ruditapes_c24844	organic anion transport	transport	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_c24844	transmembrane transport	transport	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_c23203	transmembrane transport	transport	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_c23203	organic anion transport	transport	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_s36149	ATP catabolic process	other metabolic processes	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_s36149	transport	transport	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_c24844	ATP catabolic process	other metabolic processes	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_s36149	organic anion transport	transport	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_c24844	transport	transport	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_c23203	transport	transport	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_s36149	transmembrane transport	transport	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_c23203	ATP catabolic process	other metabolic processes	P	ABC transporter C family member 7 (ABC transporter ABCC.7)
ruditapes_lrc30269	response to DNA damage stimulus	stress response	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_lrc30269	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_c27477	DNA repair	stress response	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_c27477	DNA repair	DNA metabolism	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_lrc30269	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_c27477	"DNA damage response, signal transduction"	signal transduction	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_c27477	"DNA damage response, signal transduction"	stress response	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_c27477	cell cycle checkpoint	cell cycle and proliferation	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_lrc30269	"DNA damage response, signal transduction"	signal transduction	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_lrc30269	"DNA damage response, signal transduction"	stress response	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_c27477	response to DNA damage stimulus	stress response	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_lrc30269	cell cycle checkpoint	cell cycle and proliferation	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_c27477	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_lrc30269	DNA repair	stress response	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_lrc30269	DNA repair	DNA metabolism	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_c27477	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase atr1 (EC 2.7.11.1) (Ataxia telangiectasia and rad3 related protein 1)
ruditapes_c10209	regulation of intracellular pH	other biological processes	P	Battenin (Protein CLN3 homolog)
ruditapes_c10209	vacuole organization	cell organization and biogenesis	P	Battenin (Protein CLN3 homolog)
ruditapes_c10209	arginine transport	transport	P	Battenin (Protein CLN3 homolog)
ruditapes_c10209	vacuolar transport	transport	P	Battenin (Protein CLN3 homolog)
ruditapes_c24933	DIF-1 biosynthetic process	other metabolic processes	P	Probable polyketide synthase 37 (dipks37) [Includes: Polyketide synthase stlB (EC 2.3.1.-); Chalcone synthase stlB (EC 2.3.1.74) (Steely2)]
ruditapes_c24933	sorocarp morphogenesis	stress response	P	Probable polyketide synthase 37 (dipks37) [Includes: Polyketide synthase stlB (EC 2.3.1.-); Chalcone synthase stlB (EC 2.3.1.74) (Steely2)]
ruditapes_c24933	sorocarp morphogenesis	developmental processes	P	Probable polyketide synthase 37 (dipks37) [Includes: Polyketide synthase stlB (EC 2.3.1.-); Chalcone synthase stlB (EC 2.3.1.74) (Steely2)]
ruditapes_c24933	polyketide biosynthetic process	other metabolic processes	P	Probable polyketide synthase 37 (dipks37) [Includes: Polyketide synthase stlB (EC 2.3.1.-); Chalcone synthase stlB (EC 2.3.1.74) (Steely2)]
ruditapes_c24933	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 37 (dipks37) [Includes: Polyketide synthase stlB (EC 2.3.1.-); Chalcone synthase stlB (EC 2.3.1.74) (Steely2)]
ruditapes_c24933	sorocarp stalk cell differentiation	stress response	P	Probable polyketide synthase 37 (dipks37) [Includes: Polyketide synthase stlB (EC 2.3.1.-); Chalcone synthase stlB (EC 2.3.1.74) (Steely2)]
ruditapes_c24933	sorocarp stalk cell differentiation	developmental processes	P	Probable polyketide synthase 37 (dipks37) [Includes: Polyketide synthase stlB (EC 2.3.1.-); Chalcone synthase stlB (EC 2.3.1.74) (Steely2)]
ruditapes_c24933	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 37 (dipks37) [Includes: Polyketide synthase stlB (EC 2.3.1.-); Chalcone synthase stlB (EC 2.3.1.74) (Steely2)]
ruditapes_c24933	metabolic process	other metabolic processes	P	Probable polyketide synthase 37 (dipks37) [Includes: Polyketide synthase stlB (EC 2.3.1.-); Chalcone synthase stlB (EC 2.3.1.74) (Steely2)]
ruditapes_c31831	phosphorylation	other metabolic processes	P	ATP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.93) (ATP-dependent NAD(P)HX dehydratase)
ruditapes_c18477	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 29 (dipks29) (EC 2.3.1.-)
ruditapes_c18477	metabolic process	other metabolic processes	P	Probable polyketide synthase 29 (dipks29) (EC 2.3.1.-)
ruditapes_c18477	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 29 (dipks29) (EC 2.3.1.-)
ruditapes2_c3054	glycerol metabolic process	other metabolic processes	P	Diacylglycerol O-acyltransferase 2 (EC 2.3.1.20) (Diglyceride acyltransferase 2)
ruditapes2_c3054	diacylglycerol biosynthetic process	other metabolic processes	P	Diacylglycerol O-acyltransferase 2 (EC 2.3.1.20) (Diglyceride acyltransferase 2)
ruditapes2_c3054	triglyceride biosynthetic process	other metabolic processes	P	Diacylglycerol O-acyltransferase 2 (EC 2.3.1.20) (Diglyceride acyltransferase 2)
ruditapes2_c3054	lipid metabolic process	other metabolic processes	P	Diacylglycerol O-acyltransferase 2 (EC 2.3.1.20) (Diglyceride acyltransferase 2)
ruditapes2_c3054	lipid biosynthetic process	other metabolic processes	P	Diacylglycerol O-acyltransferase 2 (EC 2.3.1.20) (Diglyceride acyltransferase 2)
ruditapes_c30144	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthetic protein purD [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)]
ruditapes_c30144	metabolic process	other metabolic processes	P	Bifunctional purine biosynthetic protein purD [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)]
ruditapes_c30144	'de novo' IMP biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthetic protein purD [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)]
ruditapes_c30144	purine base biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthetic protein purD [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)]
ruditapes_c30144	purine base metabolic process	other metabolic processes	P	Bifunctional purine biosynthetic protein purD [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase)]
ruditapes_c26363	molecular hydrogen transport	transport	P	"Probable hydroxyacid-oxoacid transhydrogenase, mitochondrial (HOT) (EC 1.1.99.24)"
ruditapes_c26363	oxidation reduction	other metabolic processes	P	"Probable hydroxyacid-oxoacid transhydrogenase, mitochondrial (HOT) (EC 1.1.99.24)"
ruditapes_c18915	dTDP biosynthetic process	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c18915	DNA repair	stress response	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c18915	dTTP biosynthetic process	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c18915	DNA-dependent DNA replication	DNA metabolism	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c18915	dUDP biosynthetic process	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c18915	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c18915	DNA repair	DNA metabolism	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c18915	phosphorylation	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c14763	response to virus	other biological processes	P	RNA polymerase II subunit 5-mediating protein homolog (RPB5-mediating protein homolog)
ruditapes_c14763	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	RNA polymerase II subunit 5-mediating protein homolog (RPB5-mediating protein homolog)
ruditapes_c14763	protein folding	protein metabolism	P	RNA polymerase II subunit 5-mediating protein homolog (RPB5-mediating protein homolog)
ruditapes_c14763	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	RNA polymerase II subunit 5-mediating protein homolog (RPB5-mediating protein homolog)
ruditapes_c29852	GPI anchor biosynthetic process	protein metabolism	P	GPI mannosyltransferase 1 (EC 2.4.1.-) (GPI mannosyltransferase I) (GPI-MT-I) (Phosphatidylinositol-glycan biosynthesis class M protein) (PIG-M)
ruditapes2_c478	mRNA processing	RNA metabolism	P	Probable serine/threonine-protein kinase irlE (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase E)
ruditapes2_c478	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase irlE (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase E)
ruditapes2_c478	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase irlE (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase E)
ruditapes_c2736	protein import into nucleus	transport	P	Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC-alpha) [Includes: Biotin carboxylase (EC 6.3.4.14)]
ruditapes_c2736	nuclear envelope organization	cell organization and biogenesis	P	Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC-alpha) [Includes: Biotin carboxylase (EC 6.3.4.14)]
ruditapes_c2736	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC-alpha) [Includes: Biotin carboxylase (EC 6.3.4.14)]
ruditapes_c2736	metabolic process	other metabolic processes	P	Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC-alpha) [Includes: Biotin carboxylase (EC 6.3.4.14)]
ruditapes_c2736	lipid biosynthetic process	other metabolic processes	P	Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC-alpha) [Includes: Biotin carboxylase (EC 6.3.4.14)]
ruditapes_c23883	G-protein coupled receptor protein signaling pathway	signal transduction	P	Frizzled and smoothened-like protein G
ruditapes_c23883	cell surface receptor linked signal transduction	signal transduction	P	Frizzled and smoothened-like protein G
ruditapes_c31585	cell division	other biological processes	P	Anaphase-promoting complex subunit 3 (APC3)
ruditapes_c31585	mitosis	cell cycle and proliferation	P	Anaphase-promoting complex subunit 3 (APC3)
ruditapes_c31585	mitosis	cell organization and biogenesis	P	Anaphase-promoting complex subunit 3 (APC3)
ruditapes_c31585	cell cycle	cell cycle and proliferation	P	Anaphase-promoting complex subunit 3 (APC3)
ruditapes_c25143	nucleotide-excision repair	stress response	P	MMS19 nucleotide excision repair protein homolog (MMS19-like protein)
ruditapes_c25143	nucleotide-excision repair	DNA metabolism	P	MMS19 nucleotide excision repair protein homolog (MMS19-like protein)
ruditapes_c25143	response to DNA damage stimulus	stress response	P	MMS19 nucleotide excision repair protein homolog (MMS19-like protein)
ruditapes_c25143	transcription from RNA polymerase II promoter	RNA metabolism	P	MMS19 nucleotide excision repair protein homolog (MMS19-like protein)
ruditapes_c25143	"transcription, DNA-dependent"	RNA metabolism	P	MMS19 nucleotide excision repair protein homolog (MMS19-like protein)
ruditapes_c25143	DNA repair	stress response	P	MMS19 nucleotide excision repair protein homolog (MMS19-like protein)
ruditapes_c25143	DNA repair	DNA metabolism	P	MMS19 nucleotide excision repair protein homolog (MMS19-like protein)
ruditapes_c8805	phagocytosis	transport	P	Integrin beta-like protein C
ruditapes_c8805	phagocytosis	cell organization and biogenesis	P	Integrin beta-like protein C
ruditapes_c8805	cell adhesion	cell adhesion	P	Integrin beta-like protein C
ruditapes_c11946	metabolic process	other metabolic processes	P	Formimidoyltransferase-cyclodeaminase (Formiminotransferase-cyclodeaminase) (FTCD) (p60) [Includes: Glutamate formimidoyltransferase (EC 2.1.2.5) (Glutamate formiminotransferase) (Glutamate formyltransferase); Formimidoyltetrahydrofolate cyclodeaminase (EC 4.3.1.4) (Formiminotetrahydrofolate cyclodeaminase)]
ruditapes_c11946	cellular metabolic process	other metabolic processes	P	Formimidoyltransferase-cyclodeaminase (Formiminotransferase-cyclodeaminase) (FTCD) (p60) [Includes: Glutamate formimidoyltransferase (EC 2.1.2.5) (Glutamate formiminotransferase) (Glutamate formyltransferase); Formimidoyltetrahydrofolate cyclodeaminase (EC 4.3.1.4) (Formiminotetrahydrofolate cyclodeaminase)]
ruditapes_c11946	histidine metabolic process	other metabolic processes	P	Formimidoyltransferase-cyclodeaminase (Formiminotransferase-cyclodeaminase) (FTCD) (p60) [Includes: Glutamate formimidoyltransferase (EC 2.1.2.5) (Glutamate formiminotransferase) (Glutamate formyltransferase); Formimidoyltetrahydrofolate cyclodeaminase (EC 4.3.1.4) (Formiminotetrahydrofolate cyclodeaminase)]
ruditapes2_c990	transport	transport	P	Endoplasmic reticulum transmembrane protein YET-like
ruditapes2_c990	protein transport	transport	P	Endoplasmic reticulum transmembrane protein YET-like
ruditapes2_c990	vesicle-mediated transport	transport	P	Endoplasmic reticulum transmembrane protein YET-like
ruditapes2_c990	intracellular protein transport	transport	P	Endoplasmic reticulum transmembrane protein YET-like
ruditapes2_c1815	oxidation reduction	other metabolic processes	P	"Glutamate dehydrogenase, mitochondrial (GDH) (EC 1.4.1.3)"
ruditapes2_c1815	cellular amino acid metabolic process	other metabolic processes	P	"Glutamate dehydrogenase, mitochondrial (GDH) (EC 1.4.1.3)"
ruditapes2_c1815	glutamate catabolic process	other metabolic processes	P	"Glutamate dehydrogenase, mitochondrial (GDH) (EC 1.4.1.3)"
ruditapes_c19392	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit J (eIF3j) (Eukaryotic translation initiation factor 3 subunit 1) (eIF-3-alpha)
ruditapes_c19392	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit J (eIF3j) (Eukaryotic translation initiation factor 3 subunit 1) (eIF-3-alpha)
ruditapes_c9426	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Gephyrin (Putative glycine receptor-tubulin linker protein homolog) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c21192	molybdopterin cofactor biosynthetic process	protein metabolism	P	Gephyrin (Putative glycine receptor-tubulin linker protein homolog) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c21192	metabolic process	other metabolic processes	P	Gephyrin (Putative glycine receptor-tubulin linker protein homolog) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c9426	molybdopterin cofactor biosynthetic process	protein metabolism	P	Gephyrin (Putative glycine receptor-tubulin linker protein homolog) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c9426	metabolic process	other metabolic processes	P	Gephyrin (Putative glycine receptor-tubulin linker protein homolog) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c21192	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Gephyrin (Putative glycine receptor-tubulin linker protein homolog) [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E)]
ruditapes_c10038	electron transport chain	other metabolic processes	P	Putative thioredoxin-5 (Trx-5)
ruditapes_c10038	cell redox homeostasis	other biological processes	P	Putative thioredoxin-5 (Trx-5)
ruditapes_c10038	protein thiol-disulfide exchange	protein metabolism	P	Putative thioredoxin-5 (Trx-5)
ruditapes_c10038	glycerol ether metabolic process	other metabolic processes	P	Putative thioredoxin-5 (Trx-5)
ruditapes_c10038	transport	transport	P	Putative thioredoxin-5 (Trx-5)
ruditapes_lrc23288	methylation	other metabolic processes	P	Methyltransferase-like protein 23 (EC 2.1.1.-)
ruditapes_c8007	protein transport	transport	P	Putative vacuolar protein sorting-associated protein 13F
ruditapes_c8007	transport	transport	P	Putative vacuolar protein sorting-associated protein 13F
ruditapes_c22621	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Probable U6 snRNA-associated Sm-like protein LSm4
ruditapes_c22621	mRNA catabolic process	RNA metabolism	P	Probable U6 snRNA-associated Sm-like protein LSm4
ruditapes_c22621	mRNA processing	RNA metabolism	P	Probable U6 snRNA-associated Sm-like protein LSm4
ruditapes_c22621	RNA splicing	RNA metabolism	P	Probable U6 snRNA-associated Sm-like protein LSm4
ruditapes_c25310	RNA splicing	RNA metabolism	P	Probable U6 snRNA-associated Sm-like protein LSm4
ruditapes_c25310	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Probable U6 snRNA-associated Sm-like protein LSm4
ruditapes_c25310	mRNA catabolic process	RNA metabolism	P	Probable U6 snRNA-associated Sm-like protein LSm4
ruditapes_c25310	mRNA processing	RNA metabolism	P	Probable U6 snRNA-associated Sm-like protein LSm4
ruditapes_c21191	metabolic process	other metabolic processes	P	Acid trehalase-like protein 1 (EC 3.2.1.-)
ruditapes_c21191	carbohydrate metabolic process	other metabolic processes	P	Acid trehalase-like protein 1 (EC 3.2.1.-)
ruditapes_c10755	protein sumoylation	protein metabolism	P	SUMO-activating enzyme subunit 2 (EC 6.3.2.-) (Ubiquitin-like 1-activating enzyme E1B)
ruditapes_c10755	protein modification process	protein metabolism	P	SUMO-activating enzyme subunit 2 (EC 6.3.2.-) (Ubiquitin-like 1-activating enzyme E1B)
ruditapes_c8697	ATP catabolic process	other metabolic processes	P	ABC transporter C family member 5 (ABC transporter ABCC.5)
ruditapes_c8697	transport	transport	P	ABC transporter C family member 5 (ABC transporter ABCC.5)
ruditapes_c8697	transmembrane transport	transport	P	ABC transporter C family member 5 (ABC transporter ABCC.5)
ruditapes_c28574	transport	transport	P	Putative vacuolar protein sorting-associated protein 13D
ruditapes_c28574	protein transport	transport	P	Putative vacuolar protein sorting-associated protein 13D
ruditapes_c28574	protein localization	other biological processes	P	Putative vacuolar protein sorting-associated protein 13D
ruditapes_lrc32542	purine base metabolic process	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes_c600	purine base catabolic process	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes_s37013	purine base catabolic process	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes_lrc32542	purine base catabolic process	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes_s37013	purine base metabolic process	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes_c600	oxidation reduction	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes_c600	purine base metabolic process	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes_lrc32542	oxidation reduction	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes_s37013	oxidation reduction	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes_c18639	biosynthetic process	other metabolic processes	P	"Probable alanine aminotransferase, mitochondrial (ALT) (EC 2.6.1.2) (Glutamate pyruvate transaminase) (GPT) (Glutamic--alanine transaminase) (Glutamic--pyruvic transaminase)"
ruditapes_c18639	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	"Probable alanine aminotransferase, mitochondrial (ALT) (EC 2.6.1.2) (Glutamate pyruvate transaminase) (GPT) (Glutamic--alanine transaminase) (Glutamic--pyruvic transaminase)"
ruditapes_c31357	nitrogen compound metabolic process	other metabolic processes	P	Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing])
ruditapes_c31357	NAD biosynthetic process	other metabolic processes	P	Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing])
ruditapes2_c4050	rRNA processing	RNA metabolism	P	HEAT repeat-containing protein 1 homolog
ruditapes2_c4050	ribosome biogenesis	other biological processes	P	HEAT repeat-containing protein 1 homolog
ruditapes_c26636	autophagy	other metabolic processes	P	Autophagy-related protein 9
ruditapes_c26636	cell proliferation	cell cycle and proliferation	P	Autophagy-related protein 9
ruditapes_c26636	locomotion	other biological processes	P	Autophagy-related protein 9
ruditapes_c26636	phagocytosis	transport	P	Autophagy-related protein 9
ruditapes_c26636	phagocytosis	cell organization and biogenesis	P	Autophagy-related protein 9
ruditapes_c26636	response to bacterium	other biological processes	P	Autophagy-related protein 9
ruditapes_c26636	macroautophagy	stress response	P	Autophagy-related protein 9
ruditapes_c26636	macroautophagy	other metabolic processes	P	Autophagy-related protein 9
ruditapes_c26636	slug development during sorocarp development	stress response	P	Autophagy-related protein 9
ruditapes_c26636	slug development during sorocarp development	developmental processes	P	Autophagy-related protein 9
ruditapes_c26636	sorocarp morphogenesis	stress response	P	Autophagy-related protein 9
ruditapes_c26636	sorocarp morphogenesis	developmental processes	P	Autophagy-related protein 9
ruditapes_c26636	protein transport	transport	P	Autophagy-related protein 9
ruditapes_c26636	aggregation involved in sorocarp development	stress response	P	Autophagy-related protein 9
ruditapes_c26636	aggregation involved in sorocarp development	developmental processes	P	Autophagy-related protein 9
ruditapes_c26636	transport	transport	P	Autophagy-related protein 9
ruditapes2_c523	oxidation reduction	other metabolic processes	P	NADH-cytochrome b5 reductase 1 (EC 1.6.2.2)
ruditapes2_c616	glycolysis	other metabolic processes	P	Probable phosphoglycerate mutase (EC 3.1.3.13) (EC 5.4.2.1) (EC 5.4.2.4) (BPG-dependent PGAM) (dPGM)
ruditapes2_c616	gluconeogenesis	other metabolic processes	P	Probable phosphoglycerate mutase (EC 3.1.3.13) (EC 5.4.2.1) (EC 5.4.2.4) (BPG-dependent PGAM) (dPGM)
ruditapes2_c616	metabolic process	other metabolic processes	P	Probable phosphoglycerate mutase (EC 3.1.3.13) (EC 5.4.2.1) (EC 5.4.2.4) (BPG-dependent PGAM) (dPGM)
ruditapes_lrc9608	exocytosis	transport	P	Exocyst complex component 1 (Exocyst complex component Sec3)
ruditapes_lrc9608	protein transport	transport	P	Exocyst complex component 1 (Exocyst complex component Sec3)
ruditapes_lrc9608	transport	transport	P	Exocyst complex component 1 (Exocyst complex component Sec3)
ruditapes_c30856	methylation	other metabolic processes	P	Putative rRNA methyltransferase (EC 2.1.1.-) (2'-O-ribose RNA methyltransferase SPB1 homolog)
ruditapes_c30856	RNA methylation	RNA metabolism	P	Putative rRNA methyltransferase (EC 2.1.1.-) (2'-O-ribose RNA methyltransferase SPB1 homolog)
ruditapes_c30856	rRNA methylation	RNA metabolism	P	Putative rRNA methyltransferase (EC 2.1.1.-) (2'-O-ribose RNA methyltransferase SPB1 homolog)
ruditapes_c30856	rRNA processing	RNA metabolism	P	Putative rRNA methyltransferase (EC 2.1.1.-) (2'-O-ribose RNA methyltransferase SPB1 homolog)
ruditapes2_lrc5086	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
ruditapes2_lrc5086	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
ruditapes2_lrc5086	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
ruditapes_c10594	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase ndrC (EC 2.7.11.1) (Nuclear DBF2-related kinase C)
ruditapes_c10594	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase ndrC (EC 2.7.11.1) (Nuclear DBF2-related kinase C)
ruditapes2_c6213	chromosome condensation	cell organization and biogenesis	P	Uncharacterized protein DDB
ruditapes2_c6213	chromosome segregation	other biological processes	P	Uncharacterized protein DDB
ruditapes_c31362	chromosome segregation	other biological processes	P	Uncharacterized protein DDB
ruditapes_c31362	chromosome condensation	cell organization and biogenesis	P	Uncharacterized protein DDB
ruditapes_c14268	proteolysis	protein metabolism	P	OTU domain-containing protein DDB
ruditapes_c17166	exocytosis	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c17166	transport	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c17166	protein transport	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c17166	vesicle docking during exocytosis	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes2_c1638	positive regulation of GTPase activity	other biological processes	P	Rho GTPase-activating protein gacC (GTPase activating factor for raC protein C)
ruditapes2_c1638	signal transduction	signal transduction	P	Rho GTPase-activating protein gacC (GTPase activating factor for raC protein C)
ruditapes_c28281	phosphorylation	other metabolic processes	P	3-phosphoinositide-dependent protein kinase B (EC 2.7.11.1) (Pdk-class protein kinase b)
ruditapes_c28281	protein amino acid phosphorylation	protein metabolism	P	3-phosphoinositide-dependent protein kinase B (EC 2.7.11.1) (Pdk-class protein kinase b)
ruditapes_c21782	DNA metabolic process	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	"nucleotide-excision repair, DNA incision, 5'-to lesion"	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	"nucleotide-excision repair, DNA incision, 5'-to lesion"	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	response to DNA damage stimulus	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	meiotic mismatch repair	cell cycle and proliferation	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	DNA repair	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	double-strand break repair via homologous recombination	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	double-strand break repair via homologous recombination	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	resolution of meiotic joint molecules as recombinants	cell cycle and proliferation	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	resolution of meiotic joint molecules as recombinants	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	response to DNA damage stimulus	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	"nucleotide-excision repair, DNA incision, 5'-to lesion"	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	"nucleotide-excision repair, DNA incision, 5'-to lesion"	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	DNA metabolic process	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	DNA repair	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	DNA repair	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	double-strand break repair via homologous recombination	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	double-strand break repair via homologous recombination	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	meiotic mismatch repair	cell cycle and proliferation	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	meiotic mismatch repair	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	meiotic mismatch repair	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	meiotic mismatch repair	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	meiotic mismatch repair	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	resolution of meiotic joint molecules as recombinants	cell cycle and proliferation	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c21782	resolution of meiotic joint molecules as recombinants	DNA metabolism	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c13522	DNA repair	stress response	P	DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision repair protein ERCC-4)
ruditapes_c26962	rRNA processing	RNA metabolism	P	Probable ATP-dependent RNA helicase ddx10 (EC 3.6.4.13) (DEAD box protein 10)
ruditapes_c26962	ribosome biogenesis	other biological processes	P	Probable ATP-dependent RNA helicase ddx10 (EC 3.6.4.13) (DEAD box protein 10)
ruditapes_s34847	glycerol-3-phosphate metabolic process	other metabolic processes	P	"Probable glycerol-3-phosphate dehydrogenase, mitochondrial (GPD-M) (GPDH-M) (EC 1.1.5.3)"
ruditapes_s34847	oxidation reduction	other metabolic processes	P	"Probable glycerol-3-phosphate dehydrogenase, mitochondrial (GPD-M) (GPDH-M) (EC 1.1.5.3)"
ruditapes_c26907	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 23 (dipks23) (EC 2.3.1.-)
ruditapes_c26907	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 23 (dipks23) (EC 2.3.1.-)
ruditapes_c26907	metabolic process	other metabolic processes	P	Probable polyketide synthase 23 (dipks23) (EC 2.3.1.-)
ruditapes_c23154	purine base metabolic process	other metabolic processes	P	Bifunctional purine synthesis protein purC/E [Includes: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase); Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) (AIR carboxylase) (AIRC)]
ruditapes_c23154	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine synthesis protein purC/E [Includes: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase); Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) (AIR carboxylase) (AIRC)]
ruditapes_c23154	'de novo' IMP biosynthetic process	other metabolic processes	P	Bifunctional purine synthesis protein purC/E [Includes: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase); Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) (AIR carboxylase) (AIRC)]
ruditapes_c23154	metabolic process	other metabolic processes	P	Bifunctional purine synthesis protein purC/E [Includes: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase); Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) (AIR carboxylase) (AIRC)]
ruditapes_lrc33513	protein amino acid deacetylation	protein metabolism	P	NAD-dependent deacetylase sir2A (EC 3.5.1.-) (Silent information regulator sir2A)
ruditapes_c27288	protein ubiquitination	protein metabolism	P	Probable E3 ubiquitin-protein ligase DDB
ruditapes_c16712	rRNA modification	RNA metabolism	P	"Probable dimethyladenosine transferase (EC 2.1.1.183) (DIM1 dimethyladenosine transferase 1 homolog) (Probable 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase) (Probable 18S rRNA dimethylase) (Probable S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c16712	rRNA methylation	RNA metabolism	P	"Probable dimethyladenosine transferase (EC 2.1.1.183) (DIM1 dimethyladenosine transferase 1 homolog) (Probable 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase) (Probable 18S rRNA dimethylase) (Probable S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c16712	rRNA processing	RNA metabolism	P	"Probable dimethyladenosine transferase (EC 2.1.1.183) (DIM1 dimethyladenosine transferase 1 homolog) (Probable 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase) (Probable 18S rRNA dimethylase) (Probable S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c16712	methylation	other metabolic processes	P	"Probable dimethyladenosine transferase (EC 2.1.1.183) (DIM1 dimethyladenosine transferase 1 homolog) (Probable 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase) (Probable 18S rRNA dimethylase) (Probable S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c12281	NAD metabolic process	other metabolic processes	P	Kynurenine 3-monooxygenase (EC 1.14.13.9) (Kynurenine 3-hydroxylase)
ruditapes_c12281	pyridine nucleotide biosynthetic process	other metabolic processes	P	Kynurenine 3-monooxygenase (EC 1.14.13.9) (Kynurenine 3-hydroxylase)
ruditapes_c12281	oxidation reduction	other metabolic processes	P	Kynurenine 3-monooxygenase (EC 1.14.13.9) (Kynurenine 3-hydroxylase)
ruditapes_c12281	metabolic process	other metabolic processes	P	Kynurenine 3-monooxygenase (EC 1.14.13.9) (Kynurenine 3-hydroxylase)
ruditapes_c29120	RNA metabolic process	RNA metabolism	P	Translation initiation factor eIF-2B subunit epsilon (eIF-2B GDP-GTP exchange factor subunit epsilon)
ruditapes_c29120	biosynthetic process	other metabolic processes	P	Translation initiation factor eIF-2B subunit epsilon (eIF-2B GDP-GTP exchange factor subunit epsilon)
ruditapes_c14875	tRNA export from nucleus	transport	P	Exportin-T (Exportin(tRNA)) (tRNA exportin)
ruditapes_c14875	transport	transport	P	Exportin-T (Exportin(tRNA)) (tRNA exportin)
ruditapes_c11779	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase iksA (EC 2.7.11.1) (Ira1 kinase suppressor protein A)
ruditapes_c11779	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase iksA (EC 2.7.11.1) (Ira1 kinase suppressor protein A)
ruditapes_c241	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin A) (Rotamase A)
ruditapes_c241	sorocarp development	stress response	P	Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin A) (Rotamase A)
ruditapes_c241	sorocarp development	developmental processes	P	Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin A) (Rotamase A)
ruditapes_c241	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin A) (Rotamase A)
ruditapes_c2373	signal transduction	signal transduction	P	Metabotropic glutamate receptor-like protein F
ruditapes_c2373	G-protein coupled receptor protein signaling pathway	signal transduction	P	Metabotropic glutamate receptor-like protein F
ruditapes_c15613	ribosome biogenesis	other biological processes	P	Putative ribosome biogenesis ATPase nvl (Nuclear valosin-containing protein-like)
ruditapes_c15613	ribosomal large subunit export from nucleus	transport	P	Putative ribosome biogenesis ATPase nvl (Nuclear valosin-containing protein-like)
ruditapes_c18533	metabolic process	other metabolic processes	P	Probable polyketide synthase 19 (dipks19) (EC 2.3.1.-)
ruditapes_c18533	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 19 (dipks19) (EC 2.3.1.-)
ruditapes_c18533	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 19 (dipks19) (EC 2.3.1.-)
ruditapes_c17553	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase drkC (EC 2.7.11.1) (Receptor-like kinase 3) (Receptor-like kinase C) (Vesicle-associated receptor tyrosine kinase-like protein 3)
ruditapes_c17553	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase drkC (EC 2.7.11.1) (Receptor-like kinase 3) (Receptor-like kinase C) (Vesicle-associated receptor tyrosine kinase-like protein 3)
ruditapes_c17553	phagocytosis	transport	P	Probable serine/threonine-protein kinase drkC (EC 2.7.11.1) (Receptor-like kinase 3) (Receptor-like kinase C) (Vesicle-associated receptor tyrosine kinase-like protein 3)
ruditapes_c17553	phagocytosis	cell organization and biogenesis	P	Probable serine/threonine-protein kinase drkC (EC 2.7.11.1) (Receptor-like kinase 3) (Receptor-like kinase C) (Vesicle-associated receptor tyrosine kinase-like protein 3)
ruditapes_c17553	phagolysosome formation	transport	P	Probable serine/threonine-protein kinase drkC (EC 2.7.11.1) (Receptor-like kinase 3) (Receptor-like kinase C) (Vesicle-associated receptor tyrosine kinase-like protein 3)
ruditapes_c17553	phagolysosome formation	cell organization and biogenesis	P	Probable serine/threonine-protein kinase drkC (EC 2.7.11.1) (Receptor-like kinase 3) (Receptor-like kinase C) (Vesicle-associated receptor tyrosine kinase-like protein 3)
ruditapes_c29473	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase abkB (EC 2.7.11.-)
ruditapes_c29473	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase abkB (EC 2.7.11.-)
ruditapes_c7580	biosynthetic process	other metabolic processes	P	"4-hydroxybenzoate polyprenyltransferase, mitochondrial (EC 2.5.1.39) (Para-hydroxybenzoate--polyprenyltransferase) (PHB:polyprenyltransferase)"
ruditapes_c7580	ubiquinone biosynthetic process	other metabolic processes	P	"4-hydroxybenzoate polyprenyltransferase, mitochondrial (EC 2.5.1.39) (Para-hydroxybenzoate--polyprenyltransferase) (PHB:polyprenyltransferase)"
ruditapes_c7580	isoprenoid biosynthetic process	other metabolic processes	P	"4-hydroxybenzoate polyprenyltransferase, mitochondrial (EC 2.5.1.39) (Para-hydroxybenzoate--polyprenyltransferase) (PHB:polyprenyltransferase)"
ruditapes2_c787	peroxisome organization	cell organization and biogenesis	P	Peroxisome biogenesis factor 3 (Peroxin-3)
ruditapes_c27094	carbohydrate metabolic process	other metabolic processes	P	Probable transaldolase (EC 2.2.1.2)
ruditapes_c27094	pentose-phosphate shunt	other metabolic processes	P	Probable transaldolase (EC 2.2.1.2)
ruditapes_c20101	intracellular protein transport	transport	P	AP-4 complex subunit epsilon (AP-4 adapter complex subunit epsilon) (Adapter-related protein complex 4 subunit epsilon) (Epsilon subunit of AP-4) (Epsilon-adaptin)
ruditapes_c20101	vesicle-mediated transport	transport	P	AP-4 complex subunit epsilon (AP-4 adapter complex subunit epsilon) (Adapter-related protein complex 4 subunit epsilon) (Epsilon subunit of AP-4) (Epsilon-adaptin)
ruditapes_c20101	transport	transport	P	AP-4 complex subunit epsilon (AP-4 adapter complex subunit epsilon) (Adapter-related protein complex 4 subunit epsilon) (Epsilon subunit of AP-4) (Epsilon-adaptin)
ruditapes_c20101	protein transport	transport	P	AP-4 complex subunit epsilon (AP-4 adapter complex subunit epsilon) (Adapter-related protein complex 4 subunit epsilon) (Epsilon subunit of AP-4) (Epsilon-adaptin)
ruditapes_c22023	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase 19 homolog (EC 2.7.11.1) (STK19 homolog)
ruditapes_c22023	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase 19 homolog (EC 2.7.11.1) (STK19 homolog)
ruditapes_c18367	actin cytoskeleton organization	cell organization and biogenesis	P	Formin-A
ruditapes2_c3461	cellular component organization	cell organization and biogenesis	P	Formin-A
ruditapes2_c3461	actin cytoskeleton organization	cell organization and biogenesis	P	Formin-A
ruditapes_c18367	cellular component organization	cell organization and biogenesis	P	Formin-A
ruditapes_c30251	regulation of translation	protein metabolism	P	Translational activator gcn1 (GCN1-like protein 1)
ruditapes_c30251	regulation of translational elongation	protein metabolism	P	Translational activator gcn1 (GCN1-like protein 1)
ruditapes_c28819	transport	transport	P	Importin-13 homolog B
ruditapes_c28819	protein transport	transport	P	Importin-13 homolog B
ruditapes_c28819	intracellular protein transport	transport	P	Importin-13 homolog B
ruditapes_c13219	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase DDB
ruditapes_c13219	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase DDB
ruditapes_c20784	signal transduction	signal transduction	P	Rho GTPase-activating protein gacP (GTPase activating factor for raC protein P)
ruditapes_c20784	positive regulation of GTPase activity	other biological processes	P	Rho GTPase-activating protein gacP (GTPase activating factor for raC protein P)
ruditapes_s38757	oxidation reduction	other metabolic processes	P	Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog (EC 1.-.-.-)
ruditapes_c23778	phospholipid biosynthetic process	other metabolic processes	P	Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 2
ruditapes_c16274	tRNA processing	RNA metabolism	P	tRNA-splicing ligase RtcB homolog (EC 6.5.1.3)
ruditapes_c29028	translation	protein metabolism	P	"Alanine--tRNA ligase, cytoplasmic (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)"
ruditapes_c29028	alanyl-tRNA aminoacylation	protein metabolism	P	"Alanine--tRNA ligase, cytoplasmic (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)"
ruditapes_c29028	alanyl-tRNA aminoacylation	RNA metabolism	P	"Alanine--tRNA ligase, cytoplasmic (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)"
ruditapes_c29028	tRNA aminoacylation	RNA metabolism	P	"Alanine--tRNA ligase, cytoplasmic (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)"
ruditapes_c28903	mRNA processing	RNA metabolism	P	ATP-dependent RNA helicase ddx23 (EC 3.6.4.13) (ATP-dependent RNA helicase helB2) (DEAD box protein 23)
ruditapes_c28903	RNA splicing	RNA metabolism	P	ATP-dependent RNA helicase ddx23 (EC 3.6.4.13) (ATP-dependent RNA helicase helB2) (DEAD box protein 23)
ruditapes_c28903	"RNA splicing, via transesterification reactions"	RNA metabolism	P	ATP-dependent RNA helicase ddx23 (EC 3.6.4.13) (ATP-dependent RNA helicase helB2) (DEAD box protein 23)
ruditapes_c4830	ribosome biogenesis	other biological processes	P	Pre-rRNA-processing protein TSR1 homolog
ruditapes_c24626	metabolic process	other metabolic processes	P	"Folic acid synthesis protein FOL1 [Includes: Dihydroneopterin aldolase (DHNA) (EC 4.1.2.25); 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c24626	phosphorylation	other metabolic processes	P	"Folic acid synthesis protein FOL1 [Includes: Dihydroneopterin aldolase (DHNA) (EC 4.1.2.25); 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c24626	folic acid biosynthetic process	other metabolic processes	P	"Folic acid synthesis protein FOL1 [Includes: Dihydroneopterin aldolase (DHNA) (EC 4.1.2.25); 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c24626	folic acid and derivative metabolic process	other metabolic processes	P	"Folic acid synthesis protein FOL1 [Includes: Dihydroneopterin aldolase (DHNA) (EC 4.1.2.25); 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c24626	pteridine and derivative metabolic process	other metabolic processes	P	"Folic acid synthesis protein FOL1 [Includes: Dihydroneopterin aldolase (DHNA) (EC 4.1.2.25); 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c24626	cellular metabolic process	other metabolic processes	P	"Folic acid synthesis protein FOL1 [Includes: Dihydroneopterin aldolase (DHNA) (EC 4.1.2.25); 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c24626	folic acid and derivative biosynthetic process	other metabolic processes	P	"Folic acid synthesis protein FOL1 [Includes: Dihydroneopterin aldolase (DHNA) (EC 4.1.2.25); 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes2_c4206	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor tf2s)
ruditapes2_c4206	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor tf2s)
ruditapes2_c4206	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor tf2s)
ruditapes2_c4206	regulation of RNA elongation	RNA metabolism	P	Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor tf2s)
ruditapes2_c4206	RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor tf2s)
ruditapes_c31720	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 1A (eIF-1A) (Eukaryotic translation initiation factor 4C) (eIF-4C)
ruditapes_c31720	translation	protein metabolism	P	Eukaryotic translation initiation factor 1A (eIF-1A) (Eukaryotic translation initiation factor 4C) (eIF-4C)
ruditapes2_c1867	translation	protein metabolism	P	40S ribosomal protein S3a
ruditapes2_c1172	chromosome condensation	cell organization and biogenesis	P	DNA protection during starvation protein (EC 1.16.-.-) (Nutrient stress-induced DNA-binding protein)
ruditapes2_c1172	oxidation reduction	other metabolic processes	P	DNA protection during starvation protein (EC 1.16.-.-) (Nutrient stress-induced DNA-binding protein)
ruditapes2_c1172	response to stress	stress response	P	DNA protection during starvation protein (EC 1.16.-.-) (Nutrient stress-induced DNA-binding protein)
ruditapes2_c1172	cellular iron ion homeostasis	other biological processes	P	DNA protection during starvation protein (EC 1.16.-.-) (Nutrient stress-induced DNA-binding protein)
ruditapes_c7055	nitrogen fixation	other metabolic processes	P	Nitrogenase molybdenum-iron protein alpha chain (EC 1.18.6.1) (Dinitrogenase) (Nitrogenase component I)
ruditapes_c7055	oxidation reduction	other metabolic processes	P	Nitrogenase molybdenum-iron protein alpha chain (EC 1.18.6.1) (Dinitrogenase) (Nitrogenase component I)
ruditapes2_c2940	phosphorylation	other metabolic processes	P	Phytochrome-like protein cph1 (EC 2.7.13.3) (Bacteriophytochrome cph1) (Light-regulated histidine kinase 1)
ruditapes2_c2940	response to red or far red light	other biological processes	P	Phytochrome-like protein cph1 (EC 2.7.13.3) (Bacteriophytochrome cph1) (Light-regulated histidine kinase 1)
ruditapes2_c2940	protein-chromophore linkage	protein metabolism	P	Phytochrome-like protein cph1 (EC 2.7.13.3) (Bacteriophytochrome cph1) (Light-regulated histidine kinase 1)
ruditapes2_c2940	detection of visible light	other biological processes	P	Phytochrome-like protein cph1 (EC 2.7.13.3) (Bacteriophytochrome cph1) (Light-regulated histidine kinase 1)
ruditapes2_c2940	protein amino acid autophosphorylation	protein metabolism	P	Phytochrome-like protein cph1 (EC 2.7.13.3) (Bacteriophytochrome cph1) (Light-regulated histidine kinase 1)
ruditapes2_c2940	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Phytochrome-like protein cph1 (EC 2.7.13.3) (Bacteriophytochrome cph1) (Light-regulated histidine kinase 1)
ruditapes2_c2940	peptidyl-histidine phosphorylation	protein metabolism	P	Phytochrome-like protein cph1 (EC 2.7.13.3) (Bacteriophytochrome cph1) (Light-regulated histidine kinase 1)
ruditapes2_c2940	"red, far-red light phototransduction"	other biological processes	P	Phytochrome-like protein cph1 (EC 2.7.13.3) (Bacteriophytochrome cph1) (Light-regulated histidine kinase 1)
ruditapes2_c2940	two-component signal transduction system (phosphorelay)	signal transduction	P	Phytochrome-like protein cph1 (EC 2.7.13.3) (Bacteriophytochrome cph1) (Light-regulated histidine kinase 1)
ruditapes2_c2940	response to stimulus	other biological processes	P	Phytochrome-like protein cph1 (EC 2.7.13.3) (Bacteriophytochrome cph1) (Light-regulated histidine kinase 1)
ruditapes2_c2940	signal transduction	signal transduction	P	Phytochrome-like protein cph1 (EC 2.7.13.3) (Bacteriophytochrome cph1) (Light-regulated histidine kinase 1)
ruditapes_c9490	"pentose-phosphate shunt, non-oxidative branch"	other metabolic processes	P	Ribose-5-phosphate isomerase (EC 5.3.1.6) (Phosphoriboisomerase)
ruditapes_c10464	sorocarp morphogenesis	stress response	P	Dual specificity protein kinase zak2 (EC 2.7.12.1) (Tyrosine-protein kinase 4) (Zaphod K Kinase 2) (Zaphod kinase 2)
ruditapes_c10464	sorocarp morphogenesis	developmental processes	P	Dual specificity protein kinase zak2 (EC 2.7.12.1) (Tyrosine-protein kinase 4) (Zaphod K Kinase 2) (Zaphod kinase 2)
ruditapes_c10464	protein amino acid phosphorylation	protein metabolism	P	Dual specificity protein kinase zak2 (EC 2.7.12.1) (Tyrosine-protein kinase 4) (Zaphod K Kinase 2) (Zaphod kinase 2)
ruditapes_c10464	multicellular organismal development	developmental processes	P	Dual specificity protein kinase zak2 (EC 2.7.12.1) (Tyrosine-protein kinase 4) (Zaphod K Kinase 2) (Zaphod kinase 2)
ruditapes_c10464	cell differentiation	other biological processes	P	Dual specificity protein kinase zak2 (EC 2.7.12.1) (Tyrosine-protein kinase 4) (Zaphod K Kinase 2) (Zaphod kinase 2)
ruditapes_c10464	positive regulation of protein kinase activity	other metabolic processes	P	Dual specificity protein kinase zak2 (EC 2.7.12.1) (Tyrosine-protein kinase 4) (Zaphod K Kinase 2) (Zaphod kinase 2)
ruditapes_c10464	phosphorylation	other metabolic processes	P	Dual specificity protein kinase zak2 (EC 2.7.12.1) (Tyrosine-protein kinase 4) (Zaphod K Kinase 2) (Zaphod kinase 2)
ruditapes_c10464	sporulation resulting in formation of a cellular spore	other biological processes	P	Dual specificity protein kinase zak2 (EC 2.7.12.1) (Tyrosine-protein kinase 4) (Zaphod K Kinase 2) (Zaphod kinase 2)
ruditapes_c10464	protein amino acid autophosphorylation	protein metabolism	P	Dual specificity protein kinase zak2 (EC 2.7.12.1) (Tyrosine-protein kinase 4) (Zaphod K Kinase 2) (Zaphod kinase 2)
ruditapes_c10464	regulation of cell fate specification	other biological processes	P	Dual specificity protein kinase zak2 (EC 2.7.12.1) (Tyrosine-protein kinase 4) (Zaphod K Kinase 2) (Zaphod kinase 2)
ruditapes_c10464	regulation of gene expression	other metabolic processes	P	Dual specificity protein kinase zak2 (EC 2.7.12.1) (Tyrosine-protein kinase 4) (Zaphod K Kinase 2) (Zaphod kinase 2)
ruditapes2_lrc3460	regulation of Rho protein signal transduction	signal transduction	P	Rac guanine nucleotide exchange factor JJ (RacGEF JJ)
ruditapes_c31030	negative regulation of lateral pseudopodium assembly	cell organization and biogenesis	P	"Guanylyl cyclase, membrane (EC 4.6.1.2) (DdGCA) (GCA)"
ruditapes_c31030	cGMP biosynthetic process	other metabolic processes	P	"Guanylyl cyclase, membrane (EC 4.6.1.2) (DdGCA) (GCA)"
ruditapes_c31030	cyclic nucleotide biosynthetic process	other metabolic processes	P	"Guanylyl cyclase, membrane (EC 4.6.1.2) (DdGCA) (GCA)"
ruditapes_c31030	myosin filament assembly or disassembly	cell organization and biogenesis	P	"Guanylyl cyclase, membrane (EC 4.6.1.2) (DdGCA) (GCA)"
ruditapes_c31030	myosin II filament disassembly	cell organization and biogenesis	P	"Guanylyl cyclase, membrane (EC 4.6.1.2) (DdGCA) (GCA)"
ruditapes_c31030	chemotaxis	other biological processes	P	"Guanylyl cyclase, membrane (EC 4.6.1.2) (DdGCA) (GCA)"
ruditapes2_c1738	photosynthesis	other metabolic processes	P	Magnesium-protoporphyrin O-methyltransferase (EC 2.1.1.11) (Magnesium-protoporphyrin IX methyltransferase)
ruditapes2_c1738	methylation	other metabolic processes	P	Magnesium-protoporphyrin O-methyltransferase (EC 2.1.1.11) (Magnesium-protoporphyrin IX methyltransferase)
ruditapes2_c1738	chlorophyll biosynthetic process	other metabolic processes	P	Magnesium-protoporphyrin O-methyltransferase (EC 2.1.1.11) (Magnesium-protoporphyrin IX methyltransferase)
ruditapes_c6268	transport	transport	P	Putative vacuolar protein sorting-associated protein 13B
ruditapes_c22695	transport	transport	P	Putative vacuolar protein sorting-associated protein 13B
ruditapes_c6268	protein transport	transport	P	Putative vacuolar protein sorting-associated protein 13B
ruditapes_c22695	protein transport	transport	P	Putative vacuolar protein sorting-associated protein 13B
ruditapes_c26098	rhythmic process	other biological processes	P	Adaptive-response sensory-kinase SasA (EC 2.7.13.3)
ruditapes_c26098	signal transduction	signal transduction	P	Adaptive-response sensory-kinase SasA (EC 2.7.13.3)
ruditapes_c26098	peptidyl-histidine phosphorylation	protein metabolism	P	Adaptive-response sensory-kinase SasA (EC 2.7.13.3)
ruditapes_c26098	two-component signal transduction system (phosphorelay)	signal transduction	P	Adaptive-response sensory-kinase SasA (EC 2.7.13.3)
ruditapes_c26098	phosphorylation	other metabolic processes	P	Adaptive-response sensory-kinase SasA (EC 2.7.13.3)
ruditapes_lrc34719	defense response to bacterium	stress response	P	Probable T4-type lysozyme 1 (EC 3.2.1.17) (Muramidase)
ruditapes_lrc34719	cytolysis	death	P	Probable T4-type lysozyme 1 (EC 3.2.1.17) (Muramidase)
ruditapes_lrc34719	metabolic process	other metabolic processes	P	Probable T4-type lysozyme 1 (EC 3.2.1.17) (Muramidase)
ruditapes2_c4482	cytolysis	death	P	Probable T4-type lysozyme 1 (EC 3.2.1.17) (Muramidase)
ruditapes2_c4482	metabolic process	other metabolic processes	P	Probable T4-type lysozyme 1 (EC 3.2.1.17) (Muramidase)
ruditapes_lrc34719	peptidoglycan catabolic process	other metabolic processes	P	Probable T4-type lysozyme 1 (EC 3.2.1.17) (Muramidase)
ruditapes2_c4482	peptidoglycan catabolic process	other metabolic processes	P	Probable T4-type lysozyme 1 (EC 3.2.1.17) (Muramidase)
ruditapes_lrc34719	cell wall macromolecule catabolic process	other metabolic processes	P	Probable T4-type lysozyme 1 (EC 3.2.1.17) (Muramidase)
ruditapes2_c4482	defense response to bacterium	stress response	P	Probable T4-type lysozyme 1 (EC 3.2.1.17) (Muramidase)
ruditapes2_c4482	cell wall macromolecule catabolic process	other metabolic processes	P	Probable T4-type lysozyme 1 (EC 3.2.1.17) (Muramidase)
ruditapes_c20790	rhamnose metabolic process	other metabolic processes	P	UPF0734 protein DDB
ruditapes_lrc26930	aggregation involved in sorocarp development	stress response	P	Communication mutant protein F
ruditapes_lrc26930	aggregation involved in sorocarp development	developmental processes	P	Communication mutant protein F
ruditapes_c29194	mRNA processing	RNA metabolism	P	Probable serine/threonine-protein kinase irlB (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase B)
ruditapes_c29194	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase irlB (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase B)
ruditapes_lrc9931	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase irlB (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase B)
ruditapes_lrc9931	mRNA processing	RNA metabolism	P	Probable serine/threonine-protein kinase irlB (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase B)
ruditapes_lrc9931	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase irlB (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase B)
ruditapes_c29194	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase irlB (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase B)
ruditapes_c22435	ER to Golgi vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 1
ruditapes_c22435	vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 1
ruditapes_c22435	transport	transport	P	Trafficking protein particle complex subunit 1
ruditapes_c13937	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 15 (dipks15) (EC 2.3.1.-)
ruditapes_c13937	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 15 (dipks15) (EC 2.3.1.-)
ruditapes_c13937	metabolic process	other metabolic processes	P	Probable polyketide synthase 15 (dipks15) (EC 2.3.1.-)
ruditapes_c5637	metabolic process	other metabolic processes	P	Probable polyketide synthase 15 (dipks15) (EC 2.3.1.-)
ruditapes_c5637	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 15 (dipks15) (EC 2.3.1.-)
ruditapes_c5637	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 15 (dipks15) (EC 2.3.1.-)
ruditapes_c9791	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 14 (dipks14) (EC 2.3.1.-)
ruditapes_c9791	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 14 (dipks14) (EC 2.3.1.-)
ruditapes_c9791	metabolic process	other metabolic processes	P	Probable polyketide synthase 14 (dipks14) (EC 2.3.1.-)
ruditapes_c17874	translation	protein metabolism	P	"Probable arginine--tRNA ligase, cytoplasmic (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)"
ruditapes_c17874	tRNA aminoacylation for protein translation	protein metabolism	P	"Probable arginine--tRNA ligase, cytoplasmic (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)"
ruditapes_c17874	tRNA aminoacylation for protein translation	RNA metabolism	P	"Probable arginine--tRNA ligase, cytoplasmic (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)"
ruditapes_c17874	arginyl-tRNA aminoacylation	protein metabolism	P	"Probable arginine--tRNA ligase, cytoplasmic (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)"
ruditapes_c17874	arginyl-tRNA aminoacylation	RNA metabolism	P	"Probable arginine--tRNA ligase, cytoplasmic (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)"
ruditapes_c15033	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial"
ruditapes_c15033	"mitochondrial electron transport, NADH to ubiquinone"	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial"
ruditapes_c15033	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial"
ruditapes_c28248	multicellular organismal development	developmental processes	P	EGF-like domain-containing protein comC (Communication mutant protein C)
ruditapes_c20804	cell cycle	cell cycle and proliferation	P	Dynamin-like protein C (EC 3.6.5.5)
ruditapes_c20804	cytokinesis	other biological processes	P	Dynamin-like protein C (EC 3.6.5.5)
ruditapes_c20804	GTP catabolic process	other metabolic processes	P	Dynamin-like protein C (EC 3.6.5.5)
ruditapes_c18971	cell division	other biological processes	P	Dynamin-like protein C (EC 3.6.5.5)
ruditapes_c18971	GTP catabolic process	other metabolic processes	P	Dynamin-like protein C (EC 3.6.5.5)
ruditapes_c20804	cell division	other biological processes	P	Dynamin-like protein C (EC 3.6.5.5)
ruditapes_c18971	cell cycle	cell cycle and proliferation	P	Dynamin-like protein C (EC 3.6.5.5)
ruditapes_c18971	cytokinesis	other biological processes	P	Dynamin-like protein C (EC 3.6.5.5)
ruditapes_c23063	phospholipid catabolic process	other metabolic processes	P	Phospholipase B-like protein B (EC 3.1.1.-)
ruditapes_c23063	phosphatidylinositol catabolic process	other metabolic processes	P	Phospholipase B-like protein B (EC 3.1.1.-)
ruditapes_c23063	lipid catabolic process	other metabolic processes	P	Phospholipase B-like protein B (EC 3.1.1.-)
ruditapes_c23063	phosphatidylethanolamine catabolic process	other metabolic processes	P	Phospholipase B-like protein B (EC 3.1.1.-)
ruditapes2_c1083	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin fusion degradation protein 1 homolog
ruditapes_c19657	DNA metabolic process	DNA metabolism	P	Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)
ruditapes_c19657	resolution of meiotic joint molecules as recombinants	cell cycle and proliferation	P	Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)
ruditapes_c19657	resolution of meiotic joint molecules as recombinants	DNA metabolism	P	Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)
ruditapes_c19657	DNA-dependent DNA replication	DNA metabolism	P	Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)
ruditapes_c19657	sister chromatid segregation	cell cycle and proliferation	P	Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)
ruditapes_c19657	sister chromatid segregation	cell organization and biogenesis	P	Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)
ruditapes_c19657	mitotic recombination	DNA metabolism	P	Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)
ruditapes_c19657	DNA topological change	DNA metabolism	P	Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)
ruditapes_c19657	decatenation checkpoint	cell cycle and proliferation	P	Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)
ruditapes_c19657	ATP catabolic process	other metabolic processes	P	Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)
ruditapes_c18972	mRNA transport	transport	P	Nuclear pore complex protein nup54 (Nucleoporin nup54)
ruditapes_c18972	protein transport	transport	P	Nuclear pore complex protein nup54 (Nucleoporin nup54)
ruditapes_c18972	transport	transport	P	Nuclear pore complex protein nup54 (Nucleoporin nup54)
ruditapes_c19941	protein transport	transport	P	Beclin-1-like protein A (Autophagy-related protein 6A)
ruditapes_c19941	sorocarp development	stress response	P	Beclin-1-like protein A (Autophagy-related protein 6A)
ruditapes_c19941	sorocarp development	developmental processes	P	Beclin-1-like protein A (Autophagy-related protein 6A)
ruditapes_c19941	transport	transport	P	Beclin-1-like protein A (Autophagy-related protein 6A)
ruditapes_c19941	macroautophagy	other metabolic processes	P	Beclin-1-like protein A (Autophagy-related protein 6A)
ruditapes_c19941	sorocarp morphogenesis	stress response	P	Beclin-1-like protein A (Autophagy-related protein 6A)
ruditapes_c19941	sorocarp morphogenesis	developmental processes	P	Beclin-1-like protein A (Autophagy-related protein 6A)
ruditapes_c19941	sporulation resulting in formation of a cellular spore	other biological processes	P	Beclin-1-like protein A (Autophagy-related protein 6A)
ruditapes_c19941	cellular response to nitrogen starvation	stress response	P	Beclin-1-like protein A (Autophagy-related protein 6A)
ruditapes_c19941	autophagy	other metabolic processes	P	Beclin-1-like protein A (Autophagy-related protein 6A)
ruditapes_c19941	macroautophagy	stress response	P	Beclin-1-like protein A (Autophagy-related protein 6A)
ruditapes_c18282	signal transduction	signal transduction	P	Arrestin domain-containing protein C
ruditapes_c19816	regulation of cell motion	other biological processes	P	MAP kinase phosphatase with leucine-rich repeats protein 1 (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c19816	protein amino acid dephosphorylation	protein metabolism	P	MAP kinase phosphatase with leucine-rich repeats protein 1 (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c19816	dephosphorylation	other metabolic processes	P	MAP kinase phosphatase with leucine-rich repeats protein 1 (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c19816	negative regulation of MAP kinase activity	other metabolic processes	P	MAP kinase phosphatase with leucine-rich repeats protein 1 (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c19816	chemotaxis	other biological processes	P	MAP kinase phosphatase with leucine-rich repeats protein 1 (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c19816	chemotaxis to cAMP	other biological processes	P	MAP kinase phosphatase with leucine-rich repeats protein 1 (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c27216	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase irlC (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase C)
ruditapes_c27216	mRNA processing	RNA metabolism	P	Probable serine/threonine-protein kinase irlC (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase C)
ruditapes_c27216	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase irlC (EC 2.7.11.1) (Inositol-requiring protein-like protein kinase C)
ruditapes_c30844	regulation of nitric-oxide synthase activity	other biological processes	P	Nitric oxide synthase-interacting protein homolog
ruditapes_c20782	exocytosis	transport	P	Rac guanine nucleotide exchange factor B
ruditapes_c20782	regulation of Rho protein signal transduction	signal transduction	P	Rac guanine nucleotide exchange factor B
ruditapes2_lrc4332	endocytosis	transport	P	Rac guanine nucleotide exchange factor B
ruditapes2_lrc4332	endocytosis	cell organization and biogenesis	P	Rac guanine nucleotide exchange factor B
ruditapes_c20782	endocytosis	cell organization and biogenesis	P	Rac guanine nucleotide exchange factor B
ruditapes2_lrc4332	actin crosslink formation	cell organization and biogenesis	P	Rac guanine nucleotide exchange factor B
ruditapes2_lrc4332	exocytosis	transport	P	Rac guanine nucleotide exchange factor B
ruditapes_c20782	actin crosslink formation	cell organization and biogenesis	P	Rac guanine nucleotide exchange factor B
ruditapes2_lrc4332	regulation of Rho protein signal transduction	signal transduction	P	Rac guanine nucleotide exchange factor B
ruditapes_c20782	endocytosis	transport	P	Rac guanine nucleotide exchange factor B
ruditapes_c12471	protein transport	transport	P	Ras-related protein Rab-32B
ruditapes_c12471	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-32B
ruditapes_c15668	two-component signal transduction system (phosphorelay)	signal transduction	P	"Adenylate cyclase, terminal-differentiation specific (EC 4.6.1.1) (ACB) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c15668	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Adenylate cyclase, terminal-differentiation specific (EC 4.6.1.1) (ACB) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c15668	signal transduction	signal transduction	P	"Adenylate cyclase, terminal-differentiation specific (EC 4.6.1.1) (ACB) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c15668	sorocarp development	stress response	P	"Adenylate cyclase, terminal-differentiation specific (EC 4.6.1.1) (ACB) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c15668	sorocarp development	developmental processes	P	"Adenylate cyclase, terminal-differentiation specific (EC 4.6.1.1) (ACB) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c15668	cyclic nucleotide biosynthetic process	other metabolic processes	P	"Adenylate cyclase, terminal-differentiation specific (EC 4.6.1.1) (ACB) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c15668	sporulation resulting in formation of a cellular spore	other biological processes	P	"Adenylate cyclase, terminal-differentiation specific (EC 4.6.1.1) (ACB) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c15668	peptidyl-histidine phosphorylation	protein metabolism	P	"Adenylate cyclase, terminal-differentiation specific (EC 4.6.1.1) (ACB) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c15668	phosphorylation	other metabolic processes	P	"Adenylate cyclase, terminal-differentiation specific (EC 4.6.1.1) (ACB) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c15668	cAMP biosynthetic process	other metabolic processes	P	"Adenylate cyclase, terminal-differentiation specific (EC 4.6.1.1) (ACB) (ATP pyrophosphate-lyase) (Adenylyl cyclase)"
ruditapes_c26238	tRNA aminoacylation for protein translation	protein metabolism	P	"Probable asparagine--tRNA ligase, mitochondrial (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c26238	tRNA aminoacylation for protein translation	RNA metabolism	P	"Probable asparagine--tRNA ligase, mitochondrial (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c26238	translation	protein metabolism	P	"Probable asparagine--tRNA ligase, mitochondrial (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c26238	asparaginyl-tRNA aminoacylation	protein metabolism	P	"Probable asparagine--tRNA ligase, mitochondrial (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c26238	asparaginyl-tRNA aminoacylation	RNA metabolism	P	"Probable asparagine--tRNA ligase, mitochondrial (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes2_c2171	establishment of cell polarity	cell organization and biogenesis	P	Probable serine/threonine-protein kinase tsuA (EC 2.7.11.1) (Tsunami)
ruditapes2_c2171	negative regulation of actin filament polymerization	protein metabolism	P	Probable serine/threonine-protein kinase tsuA (EC 2.7.11.1) (Tsunami)
ruditapes2_c2171	negative regulation of actin filament polymerization	cell organization and biogenesis	P	Probable serine/threonine-protein kinase tsuA (EC 2.7.11.1) (Tsunami)
ruditapes2_c2171	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase tsuA (EC 2.7.11.1) (Tsunami)
ruditapes2_c2171	regulation of aggregation involved in sorocarp development	developmental processes	P	Probable serine/threonine-protein kinase tsuA (EC 2.7.11.1) (Tsunami)
ruditapes2_c2171	chemotaxis to folate	other biological processes	P	Probable serine/threonine-protein kinase tsuA (EC 2.7.11.1) (Tsunami)
ruditapes2_c2171	regulation of pseudopodium assembly	cell organization and biogenesis	P	Probable serine/threonine-protein kinase tsuA (EC 2.7.11.1) (Tsunami)
ruditapes2_c2171	chemotaxis to cAMP	other biological processes	P	Probable serine/threonine-protein kinase tsuA (EC 2.7.11.1) (Tsunami)
ruditapes2_c2171	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase tsuA (EC 2.7.11.1) (Tsunami)
ruditapes2_c2171	regulation of aggregation involved in sorocarp development	stress response	P	Probable serine/threonine-protein kinase tsuA (EC 2.7.11.1) (Tsunami)
ruditapes_lrc11310	regulation of actin polymerization or depolymerization	protein metabolism	P	Abl interactor homolog
ruditapes_lrc11310	regulation of actin polymerization or depolymerization	cell organization and biogenesis	P	Abl interactor homolog
ruditapes_lrc11310	cell cycle	cell cycle and proliferation	P	Abl interactor homolog
ruditapes_lrc11310	cytokinesis	other biological processes	P	Abl interactor homolog
ruditapes_lrc11310	chemotaxis to folate	other biological processes	P	Abl interactor homolog
ruditapes_lrc11310	cell division	other biological processes	P	Abl interactor homolog
ruditapes_lrc11310	establishment of protein localization	other biological processes	P	Abl interactor homolog
ruditapes2_c300	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase roco7 (EC 2.7.11.1) (Ras of complex proteins and C-terminal of roc 7)
ruditapes_c259	positive regulation of GTPase activity	other biological processes	P	Probable serine/threonine-protein kinase roco7 (EC 2.7.11.1) (Ras of complex proteins and C-terminal of roc 7)
ruditapes_c259	regulation of small GTPase mediated signal transduction	signal transduction	P	Probable serine/threonine-protein kinase roco7 (EC 2.7.11.1) (Ras of complex proteins and C-terminal of roc 7)
ruditapes_c259	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase roco7 (EC 2.7.11.1) (Ras of complex proteins and C-terminal of roc 7)
ruditapes_c259	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase roco7 (EC 2.7.11.1) (Ras of complex proteins and C-terminal of roc 7)
ruditapes2_c300	regulation of small GTPase mediated signal transduction	signal transduction	P	Probable serine/threonine-protein kinase roco7 (EC 2.7.11.1) (Ras of complex proteins and C-terminal of roc 7)
ruditapes2_c300	positive regulation of GTPase activity	other biological processes	P	Probable serine/threonine-protein kinase roco7 (EC 2.7.11.1) (Ras of complex proteins and C-terminal of roc 7)
ruditapes2_c300	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase roco7 (EC 2.7.11.1) (Ras of complex proteins and C-terminal of roc 7)
ruditapes_c31559	carbohydrate metabolic process	other metabolic processes	P	Periplasmic beta-glucosidase (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase) (T-cell inhibitor)
ruditapes_c31559	metabolic process	other metabolic processes	P	Periplasmic beta-glucosidase (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase) (Cellobiase) (Gentiobiase) (T-cell inhibitor)
ruditapes_c12290	transcription from RNA polymerase II promoter	RNA metabolism	P	General transcription factor IIH subunit 3 (General transcription factor IIH polypeptide 3)
ruditapes_c12290	"regulation of transcription, DNA-dependent"	RNA metabolism	P	General transcription factor IIH subunit 3 (General transcription factor IIH polypeptide 3)
ruditapes_c12290	"transcription, DNA-dependent"	RNA metabolism	P	General transcription factor IIH subunit 3 (General transcription factor IIH polypeptide 3)
ruditapes_c12290	response to DNA damage stimulus	stress response	P	General transcription factor IIH subunit 3 (General transcription factor IIH polypeptide 3)
ruditapes_c12290	protein amino acid phosphorylation	protein metabolism	P	General transcription factor IIH subunit 3 (General transcription factor IIH polypeptide 3)
ruditapes_c12290	DNA repair	stress response	P	General transcription factor IIH subunit 3 (General transcription factor IIH polypeptide 3)
ruditapes_c12290	DNA repair	DNA metabolism	P	General transcription factor IIH subunit 3 (General transcription factor IIH polypeptide 3)
ruditapes_c16456	dephosphorylation	other metabolic processes	P	Dual specificity protein phosphatase 22-B (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c16456	positive regulation of JNK cascade	signal transduction	P	Dual specificity protein phosphatase 22-B (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c16456	positive regulation of JNK cascade	stress response	P	Dual specificity protein phosphatase 22-B (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c16456	protein amino acid dephosphorylation	protein metabolism	P	Dual specificity protein phosphatase 22-B (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c16456	regulation of cell proliferation	cell cycle and proliferation	P	Dual specificity protein phosphatase 22-B (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c16456	transforming growth factor beta receptor signaling pathway	signal transduction	P	Dual specificity protein phosphatase 22-B (EC 3.1.3.16) (EC 3.1.3.48)
ruditapes_c8312	small GTPase mediated signal transduction	signal transduction	P	Rab-like protein 5
ruditapes_s38163	methionine biosynthetic process	other metabolic processes	P	2-hydroxypropyl-CoM lyase (EC 4.4.1.23) (Aliphatic epoxide carboxylation component I) (Epoxyalkane:CoM transferase) (EaCoMT)
ruditapes_c19817	biological_process	other biological processes	P	Protein FAM50A
ruditapes_c17629	cell redox homeostasis	other biological processes	P	Selenoprotein W (SelW)
ruditapes_lrc25711	transport	transport	P	Outer membrane usher protein PsaC
ruditapes_lrc36922	transport	transport	P	Selenium-binding protein 1
ruditapes_c6637	protein transport	transport	P	Selenium-binding protein 1
ruditapes_c6637	transport	transport	P	Selenium-binding protein 1
ruditapes2_c3656	transport	transport	P	Selenium-binding protein 1
ruditapes2_c3656	protein transport	transport	P	Selenium-binding protein 1
ruditapes_c4655	transport	transport	P	Selenium-binding protein 1
ruditapes_c1270	protein transport	transport	P	Selenium-binding protein 1
ruditapes2_c3515	transport	transport	P	Selenium-binding protein 1
ruditapes2_c3585	transport	transport	P	Selenium-binding protein 1
ruditapes_lrc36922	protein transport	transport	P	Selenium-binding protein 1
ruditapes2_c3515	protein transport	transport	P	Selenium-binding protein 1
ruditapes_c1270	transport	transport	P	Selenium-binding protein 1
ruditapes2_c3585	protein transport	transport	P	Selenium-binding protein 1
ruditapes_lrc32824	transport	transport	P	Selenium-binding protein 1
ruditapes_c4655	protein transport	transport	P	Selenium-binding protein 1
ruditapes_lrc32824	protein transport	transport	P	Selenium-binding protein 1
ruditapes_s38292	translation	protein metabolism	P	60S ribosomal protein L38
ruditapes_lrc33786	translation	protein metabolism	P	60S ribosomal protein L38
ruditapes2_c25	translation	protein metabolism	P	60S ribosomal protein L18
ruditapes2_c5058	translation	protein metabolism	P	60S ribosomal protein L18
ruditapes_s38260	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes_lrc33836	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes_lrc38242	translation	protein metabolism	P	60S ribosomal protein L35a
ruditapes_lrc24298	translation	protein metabolism	P	60S ribosomal protein L27a
ruditapes_s37523	translation	protein metabolism	P	60S ribosomal protein L27a
ruditapes_c15734	post-translational protein amino acid acetylation	protein metabolism	P	N-acetyltransferase ESCO2 (EC 2.3.1.-) (Establishment of cohesion 1 homolog 2) (ECO1 homolog 2)
ruditapes_c15734	regulation of DNA replication	DNA metabolism	P	N-acetyltransferase ESCO2 (EC 2.3.1.-) (Establishment of cohesion 1 homolog 2) (ECO1 homolog 2)
ruditapes_c15734	cell cycle	cell cycle and proliferation	P	N-acetyltransferase ESCO2 (EC 2.3.1.-) (Establishment of cohesion 1 homolog 2) (ECO1 homolog 2)
ruditapes_c31545	negative regulation of RNA elongation from RNA polymerase II promoter	RNA metabolism	P	E2F-associated phosphoprotein (EAPP)
ruditapes_c31545	positive regulation of RNA elongation from RNA polymerase II promoter	RNA metabolism	P	E2F-associated phosphoprotein (EAPP)
ruditapes_c31545	positive regulation of cell proliferation	cell cycle and proliferation	P	E2F-associated phosphoprotein (EAPP)
ruditapes_c3588	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c31392	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c12604	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c10835	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes2_c2468	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c3588	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes2_c2324	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c18323	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c10835	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c31392	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c18323	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes2_c2324	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes2_c2468	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c12604	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c16570	oxidation reduction	other metabolic processes	P	"Pyridoxal reductase, chloroplastic (EC 1.1.1.65)"
ruditapes_c26596	"cytoadherence to microvasculature, mediated by parasite protein"	other biological processes	P	Cytadherence high molecular weight protein 3 (Accessory adhesin protein 3) (Cytadherence accessory protein 3) (P69)
ruditapes_c26596	pathogenesis	other biological processes	P	Cytadherence high molecular weight protein 3 (Accessory adhesin protein 3) (Cytadherence accessory protein 3) (P69)
ruditapes_c8929	negative regulation of cell size	other biological processes	P	DEP domain-containing mTOR-interacting protein (DEP domain-containing protein 6)
ruditapes_c8929	negative regulation of TOR signaling pathway	signal transduction	P	DEP domain-containing mTOR-interacting protein (DEP domain-containing protein 6)
ruditapes_c8929	negative regulation of protein kinase activity	other metabolic processes	P	DEP domain-containing mTOR-interacting protein (DEP domain-containing protein 6)
ruditapes_c8929	regulation of apoptosis	death	P	DEP domain-containing mTOR-interacting protein (DEP domain-containing protein 6)
ruditapes_c13695	methionine biosynthetic process	other metabolic processes	P	Uncharacterized protein HI
ruditapes_c26464	transport	transport	P	Galactoside transport system permease protein MglC homolog
ruditapes_c26464	carbohydrate transport	transport	P	Galactoside transport system permease protein MglC homolog
ruditapes_c22191	DNA recombination	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c22191	DNA repair	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c22191	DNA repair	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c22191	response to DNA damage stimulus	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c22191	SOS response	stress response	P	Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12)
ruditapes_c28914	cellular amino acid biosynthetic process	other metabolic processes	P	Putative inactive aspartokinase 3 HI
ruditapes_c24942	tricarboxylic acid cycle	other metabolic processes	P	Uncharacterized iron-sulfur protein MJ0092
ruditapes_c24942	oxidation reduction	other metabolic processes	P	Uncharacterized iron-sulfur protein MJ0092
ruditapes_c8679	metabolic process	other metabolic processes	P	Probable aromatic acid decarboxylase (EC 4.1.1.-)
ruditapes_c11582	transport	transport	P	Cytoglobin-2
ruditapes_c7708	oxygen transport	transport	P	Cytoglobin-2
ruditapes_c11582	oxygen transport	transport	P	Cytoglobin-2
ruditapes_c7708	transport	transport	P	Cytoglobin-2
ruditapes_s33796	protein modification process	protein metabolism	P	Probable hydrogenase nickel incorporation protein HypA
ruditapes_c12158	phosphate metabolic process	other metabolic processes	P	Uncharacterized protein MJ0240
ruditapes_lrc38792	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_lrc38792	metabolic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_lrc38792	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes2_lrc6709	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes2_lrc6709	metabolic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes2_lrc6709	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
ruditapes_lrc32920	biosynthetic process	other metabolic processes	P	Uncharacterized protein MJ0258
ruditapes_c9970	intein-mediated protein splicing	protein metabolism	P	Probable translation initiation factor IF-2 [Cleaved into: Mja infB intein (Mja IF2 intein)]
ruditapes_c9970	translation	protein metabolism	P	Probable translation initiation factor IF-2 [Cleaved into: Mja infB intein (Mja IF2 intein)]
ruditapes_c9970	GTP catabolic process	other metabolic processes	P	Probable translation initiation factor IF-2 [Cleaved into: Mja infB intein (Mja IF2 intein)]
ruditapes_c9970	translational initiation	protein metabolism	P	Probable translation initiation factor IF-2 [Cleaved into: Mja infB intein (Mja IF2 intein)]
ruditapes_c10738	protein tetramerization	cell organization and biogenesis	P	Uncharacterized protein MJ0357
ruditapes_c10738	protein transport	transport	P	Uncharacterized protein MJ0357
ruditapes_c5209	DNA replication	DNA metabolism	P	Uncharacterized protein MJ0417
ruditapes2_c3328	response to stress	stress response	P	Universal stress protein MJ0531 (USP MJ0531)
ruditapes2_c3592	response to stress	stress response	P	Universal stress protein MJ0531 (USP MJ0531)
ruditapes2_c3553	response to stress	stress response	P	Universal stress protein MJ0531 (USP MJ0531)
ruditapes2_c1446	response to stress	stress response	P	Universal stress protein MJ0531 (USP MJ0531)
ruditapes_c2772	response to stress	stress response	P	Universal stress protein MJ0531 (USP MJ0531)
ruditapes2_c2682	response to stress	stress response	P	Universal stress protein MJ0531 (USP MJ0531)
ruditapes_c10540	oxidation reduction	other metabolic processes	P	Uncharacterized protein MJ0551
ruditapes_c20277	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_c4126	response to stress	stress response	P	Universal stress protein MJ0577 (USP MJ0577)
ruditapes_c11933	response to stress	stress response	P	Universal stress protein MJ0577 (USP MJ0577)
ruditapes2_c2623	response to stress	stress response	P	Universal stress protein MJ0577 (USP MJ0577)
ruditapes_c17896	response to stress	stress response	P	Universal stress protein MJ0577 (USP MJ0577)
ruditapes_c30235	transport	transport	P	Leu/Ile/Val-binding protein homolog 1
ruditapes_c30235	amino acid transport	transport	P	Leu/Ile/Val-binding protein homolog 1
ruditapes_c10973	protein amino acid deacetylation	protein metabolism	P	NAD-dependent protein deacetylase SIR2rp1 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-related protein 1)
ruditapes_c3794	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Mja pol-1 intein; Mja pol-2 intein]
ruditapes_c3794	intein-mediated protein splicing	protein metabolism	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Mja pol-1 intein; Mja pol-2 intein]
ruditapes_c3794	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7) [Cleaved into: Mja pol-1 intein; Mja pol-2 intein]
ruditapes_c18820	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Probable ATP-dependent helicase MJ0942 (EC 3.6.4.12)
ruditapes_c21938	transport	transport	P	Phosphate-binding protein PstS (PBP)
ruditapes_c21938	phosphate transport	transport	P	Phosphate-binding protein PstS (PBP)
ruditapes2_lrc4001	transport	transport	P	Uncharacterized transporter MJ1031
ruditapes2_lrc4001	transmembrane transport	transport	P	Uncharacterized transporter MJ1031
ruditapes_c24386	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit A' (EC 2.7.7.6) [Cleaved into: Mja rpoA1 intein (Mja rpol A' intein)]
ruditapes_c24386	intein-mediated protein splicing	protein metabolism	P	DNA-directed RNA polymerase subunit A' (EC 2.7.7.6) [Cleaved into: Mja rpoA1 intein (Mja rpol A' intein)]
ruditapes_c22441	intron homing	DNA metabolism	P	DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6) [Cleaved into: Mja rpoA2 intein (Mja rpol A'' intein)]
ruditapes_c22441	intein-mediated protein splicing	protein metabolism	P	DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6) [Cleaved into: Mja rpoA2 intein (Mja rpol A'' intein)]
ruditapes_c22441	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6) [Cleaved into: Mja rpoA2 intein (Mja rpol A'' intein)]
ruditapes_c14755	ATP catabolic process	other metabolic processes	P	Putative cation-transporting ATPase MJ1226 (EC 3.6.3.-)
ruditapes_c14755	cation transport	transport	P	Putative cation-transporting ATPase MJ1226 (EC 3.6.3.-)
ruditapes_c14755	metabolic process	other metabolic processes	P	Putative cation-transporting ATPase MJ1226 (EC 3.6.3.-)
ruditapes_c14755	ATP biosynthetic process	other metabolic processes	P	Putative cation-transporting ATPase MJ1226 (EC 3.6.3.-)
ruditapes_c24592	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c24592	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c27518	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c24592	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c24592	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c27518	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c24592	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c27518	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c27518	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c27518	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c13180	oxidation reduction	other metabolic processes	P	Uncharacterized protein MJ1362
ruditapes_c7724	biosynthetic process	other metabolic processes	P	Uncharacterized aminotransferase MJ1479 (EC 2.6.1.-)
ruditapes_c7724	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	Uncharacterized aminotransferase MJ1479 (EC 2.6.1.-)
ruditapes_c30374	negative regulation of cAMP biosynthetic process	other metabolic processes	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	G-protein coupled receptor internalization	signal transduction	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	G-protein coupled receptor internalization	transport	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	G-protein coupled receptor internalization	other metabolic processes	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	G-protein coupled receptor internalization	cell organization and biogenesis	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	G-protein coupled receptor protein signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	bone remodeling	other biological processes	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	serotonin receptor signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	response to toxin	other biological processes	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	signal transduction	signal transduction	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c30374	response to drug	other biological processes	P	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)
ruditapes_c25171	DNA topological change	DNA metabolism	P	Reverse gyrase [Cleaved into: Mja r-Gyr intein] [Includes: Helicase (EC 3.6.4.12); Topoisomerase (EC 5.99.1.3)]
ruditapes_c25171	intein-mediated protein splicing	protein metabolism	P	Reverse gyrase [Cleaved into: Mja r-Gyr intein] [Includes: Helicase (EC 3.6.4.12); Topoisomerase (EC 5.99.1.3)]
ruditapes_c25171	intron homing	DNA metabolism	P	Reverse gyrase [Cleaved into: Mja r-Gyr intein] [Includes: Helicase (EC 3.6.4.12); Topoisomerase (EC 5.99.1.3)]
ruditapes_c23758	metabolic process	other metabolic processes	P	Uncharacterized protein MJ1549
ruditapes_c8119	cobalamin biosynthetic process	other metabolic processes	P	UPF0284 protein MJ1598
ruditapes_c11886	regulation of the force of heart contraction	other biological processes	P	Glutaredoxin-3 (PKC-interacting cousin of thioredoxin) (PICOT) (Thioredoxin-like protein 2)
ruditapes_c11886	cell redox homeostasis	other biological processes	P	Glutaredoxin-3 (PKC-interacting cousin of thioredoxin) (PICOT) (Thioredoxin-like protein 2)
ruditapes_c11886	negative regulation of cardiac muscle hypertrophy	other biological processes	P	Glutaredoxin-3 (PKC-interacting cousin of thioredoxin) (PICOT) (Thioredoxin-like protein 2)
ruditapes2_c1223	ion transport	transport	P	Sodium-independent sulfate anion transporter (Solute carrier family 26 member 11)
ruditapes2_c1223	sulfate transport	transport	P	Sodium-independent sulfate anion transporter (Solute carrier family 26 member 11)
ruditapes2_c1223	transport	transport	P	Sodium-independent sulfate anion transporter (Solute carrier family 26 member 11)
ruditapes2_c1223	transmembrane transport	transport	P	Sodium-independent sulfate anion transporter (Solute carrier family 26 member 11)
ruditapes2_c283	"regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes2_c6760	"regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes2_c283	"transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes2_c283	ectoderm development	developmental processes	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes_c25355	"regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes2_c283	mammary gland epithelial cell differentiation	developmental processes	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes2_c6760	mammary gland epithelial cell differentiation	developmental processes	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes_c26839	ectoderm development	developmental processes	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes2_c6760	"transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes2_c6760	ectoderm development	developmental processes	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes_c25355	mammary gland epithelial cell differentiation	developmental processes	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes_c25355	"transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes_c26839	"regulation of transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes_c25355	ectoderm development	developmental processes	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes_c26839	mammary gland epithelial cell differentiation	developmental processes	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes_c26839	"transcription, DNA-dependent"	RNA metabolism	P	ETS-related transcription factor Elf-5 (E74-like factor 5)
ruditapes_c18218	biological_process	other biological processes	P	Tetraspanin-17
ruditapes_c14894	quinate metabolic process	other metabolic processes	P	Catabolic 3-dehydroquinase (cDHQase) (EC 4.2.1.10) (3-dehydroquinate dehydratase)
ruditapes2_c1057	potassium ion transport	transport	P	Cation/H(+) antiporter 8 (Protein CATION/H+ EXCHANGER 8) (AtCHX8)
ruditapes2_c1057	cation transport	transport	P	Cation/H(+) antiporter 8 (Protein CATION/H+ EXCHANGER 8) (AtCHX8)
ruditapes_c17431	ion transport	transport	P	Cation/H(+) antiporter 8 (Protein CATION/H+ EXCHANGER 8) (AtCHX8)
ruditapes2_c1057	transmembrane transport	transport	P	Cation/H(+) antiporter 8 (Protein CATION/H+ EXCHANGER 8) (AtCHX8)
ruditapes_c17431	cation transport	transport	P	Cation/H(+) antiporter 8 (Protein CATION/H+ EXCHANGER 8) (AtCHX8)
ruditapes2_c1057	ion transport	transport	P	Cation/H(+) antiporter 8 (Protein CATION/H+ EXCHANGER 8) (AtCHX8)
ruditapes_c17431	transport	transport	P	Cation/H(+) antiporter 8 (Protein CATION/H+ EXCHANGER 8) (AtCHX8)
ruditapes_c17431	transmembrane transport	transport	P	Cation/H(+) antiporter 8 (Protein CATION/H+ EXCHANGER 8) (AtCHX8)
ruditapes_c17431	potassium ion transport	transport	P	Cation/H(+) antiporter 8 (Protein CATION/H+ EXCHANGER 8) (AtCHX8)
ruditapes2_c1057	transport	transport	P	Cation/H(+) antiporter 8 (Protein CATION/H+ EXCHANGER 8) (AtCHX8)
ruditapes_c21277	DNA replication	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c21277	DNA catabolic process	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c21277	metabolic process	other metabolic processes	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c3498	methanogenesis	other metabolic processes	P	Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase)
ruditapes_c3498	one-carbon compound metabolic process	other metabolic processes	P	Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase)
ruditapes_c14491	nitrogen fixation	other metabolic processes	P	Nitrogen fixation protein FixI (E1-E2 type cation ATPase FixI) (EC 3.6.3.-)
ruditapes_c14491	ATP biosynthetic process	other metabolic processes	P	Nitrogen fixation protein FixI (E1-E2 type cation ATPase FixI) (EC 3.6.3.-)
ruditapes_c14491	metal ion transport	transport	P	Nitrogen fixation protein FixI (E1-E2 type cation ATPase FixI) (EC 3.6.3.-)
ruditapes_c14491	cation transport	transport	P	Nitrogen fixation protein FixI (E1-E2 type cation ATPase FixI) (EC 3.6.3.-)
ruditapes_c14491	ATP metabolic process	other metabolic processes	P	Nitrogen fixation protein FixI (E1-E2 type cation ATPase FixI) (EC 3.6.3.-)
ruditapes_c14491	metabolic process	other metabolic processes	P	Nitrogen fixation protein FixI (E1-E2 type cation ATPase FixI) (EC 3.6.3.-)
ruditapes2_c1808	blood coagulation	stress response	P	Coagulation factor V [Cleaved into: Coagulation factor V heavy chain; Coagulation factor V light chain]
ruditapes2_c1808	cell adhesion	cell adhesion	P	Coagulation factor V [Cleaved into: Coagulation factor V heavy chain; Coagulation factor V light chain]
ruditapes2_c3050	polysaccharide catabolic process	other metabolic processes	P	Beta-glucosidase A (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase) (Gentiobiase)
ruditapes2_c3050	carbohydrate metabolic process	other metabolic processes	P	Beta-glucosidase A (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase) (Gentiobiase)
ruditapes2_c3050	cellulose catabolic process	other metabolic processes	P	Beta-glucosidase A (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase) (Gentiobiase)
ruditapes2_c3050	metabolic process	other metabolic processes	P	Beta-glucosidase A (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase) (Gentiobiase)
ruditapes_lrc13208	glycolysis	other metabolic processes	P	Pyruvate dehydrogenase E1 component (PDH E1 component) (EC 1.2.4.1)
ruditapes_lrc13208	oxidation reduction	other metabolic processes	P	Pyruvate dehydrogenase E1 component (PDH E1 component) (EC 1.2.4.1)
ruditapes_lrc13208	metabolic process	other metabolic processes	P	Pyruvate dehydrogenase E1 component (PDH E1 component) (EC 1.2.4.1)
ruditapes2_c2246	carbohydrate metabolic process	other metabolic processes	P	UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
ruditapes2_c2246	cellular metabolic process	other metabolic processes	P	UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
ruditapes2_c2246	galactose metabolic process	other metabolic processes	P	UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
ruditapes_c13239	cAMP biosynthetic process	other metabolic processes	P	Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)
ruditapes_s32563	cellular carbohydrate metabolic process	other metabolic processes	P	Citrate synthase (EC 2.3.3.1) (Fragment)
ruditapes_s32563	tricarboxylic acid cycle	other metabolic processes	P	Citrate synthase (EC 2.3.3.1) (Fragment)
ruditapes_c26124	folic acid and derivative biosynthetic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes_c26124	one-carbon compound metabolic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes_c16084	tricarboxylic acid cycle	other metabolic processes	P	Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)
ruditapes_c16084	oxidation reduction	other metabolic processes	P	Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)
ruditapes_c16084	glyoxylate cycle	other metabolic processes	P	Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)
ruditapes2_c1549	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c1549	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c1549	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c1549	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c4546	metabolic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c4546	'de novo' IMP biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c20219	purine base biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c4546	biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c20219	methylation	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c20219	metabolic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c4546	methylation	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c4546	purine nucleotide biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c20219	'de novo' IMP biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c20219	purine nucleotide biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c20219	biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes_c4546	purine base biosynthetic process	other metabolic processes	P	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]
ruditapes2_c2583	amino acid transport	transport	P	Y+L amino acid transporter 2 (Solute carrier family 7 member 6) (zfSlc7a6) (y(+)L-type amino acid transporter 2) (Y+LAT2) (y+LAT-2)
ruditapes2_c2583	transport	transport	P	Y+L amino acid transporter 2 (Solute carrier family 7 member 6) (zfSlc7a6) (y(+)L-type amino acid transporter 2) (Y+LAT2) (y+LAT-2)
ruditapes_c30753	proteolysis	protein metabolism	P	Aminopeptidase 2 (EC 3.4.11.-)
ruditapes_c12530	proteolysis	protein metabolism	P	Aminopeptidase 2 (EC 3.4.11.-)
ruditapes_c10696	chromatin modification	cell organization and biogenesis	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c10696	chromosome organization	cell organization and biogenesis	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c10696	DNA repair	stress response	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c10696	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c10696	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c10696	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c10696	meiosis	cell cycle and proliferation	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_lrc16595	biofilm formation	other biological processes	P	"ATP-dependent RNA helicase SUV3, mitochondrial (EC 3.6.4.13)"
ruditapes_lrc16595	filamentous growth	other biological processes	P	"ATP-dependent RNA helicase SUV3, mitochondrial (EC 3.6.4.13)"
ruditapes_lrc16595	aerobic respiration	other metabolic processes	P	"ATP-dependent RNA helicase SUV3, mitochondrial (EC 3.6.4.13)"
ruditapes_lrc16595	chlamydospore formation	other biological processes	P	"ATP-dependent RNA helicase SUV3, mitochondrial (EC 3.6.4.13)"
ruditapes_lrc16595	hyphal growth	other biological processes	P	"ATP-dependent RNA helicase SUV3, mitochondrial (EC 3.6.4.13)"
ruditapes_c17241	phosphorylation	other metabolic processes	P	Polynucleotide 5'-hydroxyl-kinase GRC3 (EC 2.7.1.-)
ruditapes_c17241	rRNA processing	RNA metabolism	P	Polynucleotide 5'-hydroxyl-kinase GRC3 (EC 2.7.1.-)
ruditapes_c14642	metabolic process	other metabolic processes	P	Adenylyltransferase and sulfurtransferase UBA4 (Ubiquitin-like protein activator 4) [Includes: Adenylyltransferase UBA4 (EC 2.7.7.-); Sulfurtransferase UBA4 (EC 2.8.1.-)]
ruditapes_c14642	tRNA processing	RNA metabolism	P	Adenylyltransferase and sulfurtransferase UBA4 (Ubiquitin-like protein activator 4) [Includes: Adenylyltransferase UBA4 (EC 2.7.7.-); Sulfurtransferase UBA4 (EC 2.8.1.-)]
ruditapes_lrc33851	rRNA processing	RNA metabolism	P	rRNA-processing protein CGR1
ruditapes_s36553	ribosome biogenesis	other biological processes	P	rRNA-processing protein CGR1
ruditapes2_lrc4778	rRNA processing	RNA metabolism	P	rRNA-processing protein CGR1
ruditapes2_lrc4919	rRNA processing	RNA metabolism	P	rRNA-processing protein CGR1
ruditapes2_lrc5441	rRNA processing	RNA metabolism	P	rRNA-processing protein CGR1
ruditapes2_lrc4778	ribosome biogenesis	other biological processes	P	rRNA-processing protein CGR1
ruditapes2_lrc5441	ribosome biogenesis	other biological processes	P	rRNA-processing protein CGR1
ruditapes2_lrc5071	ribosome biogenesis	other biological processes	P	rRNA-processing protein CGR1
ruditapes2_lrc4919	ribosome biogenesis	other biological processes	P	rRNA-processing protein CGR1
ruditapes2_lrc5071	rRNA processing	RNA metabolism	P	rRNA-processing protein CGR1
ruditapes_s35455	rRNA processing	RNA metabolism	P	rRNA-processing protein CGR1
ruditapes_s33552	ribosome biogenesis	other biological processes	P	rRNA-processing protein CGR1
ruditapes_s36058	ribosome biogenesis	other biological processes	P	rRNA-processing protein CGR1
ruditapes2_lrc5849	rRNA processing	RNA metabolism	P	rRNA-processing protein CGR1
ruditapes2_lrc5849	ribosome biogenesis	other biological processes	P	rRNA-processing protein CGR1
ruditapes_s35455	ribosome biogenesis	other biological processes	P	rRNA-processing protein CGR1
ruditapes_s33552	rRNA processing	RNA metabolism	P	rRNA-processing protein CGR1
ruditapes_s36553	rRNA processing	RNA metabolism	P	rRNA-processing protein CGR1
ruditapes_lrc33851	ribosome biogenesis	other biological processes	P	rRNA-processing protein CGR1
ruditapes_s36058	rRNA processing	RNA metabolism	P	rRNA-processing protein CGR1
ruditapes2_c1011	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MSH3 (MutS protein homolog 3)
ruditapes2_c1011	mismatch repair	stress response	P	DNA mismatch repair protein MSH3 (MutS protein homolog 3)
ruditapes2_c1011	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MSH3 (MutS protein homolog 3)
ruditapes2_c1011	DNA repair	stress response	P	DNA mismatch repair protein MSH3 (MutS protein homolog 3)
ruditapes2_c1011	DNA repair	DNA metabolism	P	DNA mismatch repair protein MSH3 (MutS protein homolog 3)
ruditapes_lrc6950	GPI anchor biosynthetic process	protein metabolism	P	GPI mannosyltransferase 4 (EC 2.4.1.-) (CaSMP3) (GPI mannosyltransferase IV) (GPI-MT-IV)
ruditapes_lrc6950	fungal-type cell wall biogenesis	other biological processes	P	GPI mannosyltransferase 4 (EC 2.4.1.-) (CaSMP3) (GPI mannosyltransferase IV) (GPI-MT-IV)
ruditapes_c3481	biological_process	other biological processes	P	Potential protein lysine methyltransferase SET5 (EC 2.1.1.-) (SET domain-containing protein 5)
ruditapes_c3481	methylation	other metabolic processes	P	Potential protein lysine methyltransferase SET5 (EC 2.1.1.-) (SET domain-containing protein 5)
ruditapes_c4017	mitosis	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes_c4017	mitosis	cell organization and biogenesis	P	Probable kinetochore protein NUF2
ruditapes_s33680	cell division	other biological processes	P	Probable kinetochore protein NUF2
ruditapes2_lrc5120	cell cycle	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes2_lrc4380	mitosis	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes2_lrc4380	mitosis	cell organization and biogenesis	P	Probable kinetochore protein NUF2
ruditapes2_lrc3880	cell cycle	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes_c4017	cell division	other biological processes	P	Probable kinetochore protein NUF2
ruditapes_c4017	cell cycle	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes2_lrc4380	cell cycle	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes_s33680	mitosis	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes_s33680	mitosis	cell organization and biogenesis	P	Probable kinetochore protein NUF2
ruditapes2_lrc3880	cell division	other biological processes	P	Probable kinetochore protein NUF2
ruditapes2_lrc5120	mitosis	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes2_lrc5120	mitosis	cell organization and biogenesis	P	Probable kinetochore protein NUF2
ruditapes_lrc33895	mitosis	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes_lrc33895	mitosis	cell organization and biogenesis	P	Probable kinetochore protein NUF2
ruditapes2_lrc4380	cell division	other biological processes	P	Probable kinetochore protein NUF2
ruditapes2_lrc5120	cell division	other biological processes	P	Probable kinetochore protein NUF2
ruditapes_lrc33895	cell division	other biological processes	P	Probable kinetochore protein NUF2
ruditapes2_lrc3880	mitosis	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes2_lrc3880	mitosis	cell organization and biogenesis	P	Probable kinetochore protein NUF2
ruditapes_lrc33895	cell cycle	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes_s33680	cell cycle	cell cycle and proliferation	P	Probable kinetochore protein NUF2
ruditapes2_c1002	phospholipid homeostasis	other biological processes	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes2_c1002	fungal-type cell wall biogenesis	other biological processes	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes2_c1002	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes2_c1002	pathogenesis	other biological processes	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes2_c1002	filamentous growth	other biological processes	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes2_c1002	"transcription, DNA-dependent"	RNA metabolism	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes_c30630	translation	protein metabolism	P	"Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)"
ruditapes_c7112	transport	transport	P	Nuclear protein localization protein 4
ruditapes_c7112	protein transport	transport	P	Nuclear protein localization protein 4
ruditapes_c7112	mRNA transport	transport	P	Nuclear protein localization protein 4
ruditapes_lrc17898	mRNA transport	transport	P	Nuclear protein localization protein 4
ruditapes_lrc17898	transport	transport	P	Nuclear protein localization protein 4
ruditapes_lrc17898	protein transport	transport	P	Nuclear protein localization protein 4
ruditapes_c14507	biological_process	other biological processes	P	Protein OS-9 homolog
ruditapes2_c2186	DNA repair	stress response	P	DNA repair protein RAD5 (EC 3.6.4.-)
ruditapes2_c2186	DNA repair	DNA metabolism	P	DNA repair protein RAD5 (EC 3.6.4.-)
ruditapes2_c2186	response to DNA damage stimulus	stress response	P	DNA repair protein RAD5 (EC 3.6.4.-)
ruditapes_c30965	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14)
ruditapes_c30965	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14)
ruditapes_c30965	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14)
ruditapes_c25041	cellular process	other biological processes	P	Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated with ribosomal export complex protein 1)
ruditapes_c25041	proteolysis	protein metabolism	P	Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated with ribosomal export complex protein 1)
ruditapes_c19208	glutamine catabolic process	other metabolic processes	P	"Carbamoyl-phosphate synthase arginine-specific small chain (CPS-A) (EC 6.3.5.5) (Arginine-specific carbamoyl-phosphate synthetase, glutamine chain)"
ruditapes_c19208	glutamine metabolic process	other metabolic processes	P	"Carbamoyl-phosphate synthase arginine-specific small chain (CPS-A) (EC 6.3.5.5) (Arginine-specific carbamoyl-phosphate synthetase, glutamine chain)"
ruditapes_c19208	arginine biosynthetic process	other metabolic processes	P	"Carbamoyl-phosphate synthase arginine-specific small chain (CPS-A) (EC 6.3.5.5) (Arginine-specific carbamoyl-phosphate synthetase, glutamine chain)"
ruditapes_c19208	cellular amino acid biosynthetic process	other metabolic processes	P	"Carbamoyl-phosphate synthase arginine-specific small chain (CPS-A) (EC 6.3.5.5) (Arginine-specific carbamoyl-phosphate synthetase, glutamine chain)"
ruditapes_c19208	carbamoyl phosphate biosynthetic process	other metabolic processes	P	"Carbamoyl-phosphate synthase arginine-specific small chain (CPS-A) (EC 6.3.5.5) (Arginine-specific carbamoyl-phosphate synthetase, glutamine chain)"
ruditapes_c20779	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Helicase swr1 (EC 3.6.4.12)
ruditapes_c20779	"transcription, DNA-dependent"	RNA metabolism	P	Helicase swr1 (EC 3.6.4.12)
ruditapes_c20779	chromatin modification	cell organization and biogenesis	P	Helicase swr1 (EC 3.6.4.12)
ruditapes_c21534	nucleotide-sugar transport	transport	P	GDP-mannose transporter 1 (GMT 1)
ruditapes_c21534	transport	transport	P	GDP-mannose transporter 1 (GMT 1)
ruditapes_c21534	transmembrane transport	transport	P	GDP-mannose transporter 1 (GMT 1)
ruditapes_c21534	carbohydrate transport	transport	P	GDP-mannose transporter 1 (GMT 1)
ruditapes_lrc36702	metabolic process	other metabolic processes	P	Probable beta-glucosidase J (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase J) (Cellobiase J) (Gentiobiase J)
ruditapes_lrc32560	cellulose catabolic process	other metabolic processes	P	Probable beta-glucosidase J (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase J) (Cellobiase J) (Gentiobiase J)
ruditapes_lrc32560	carbohydrate metabolic process	other metabolic processes	P	Probable beta-glucosidase J (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase J) (Cellobiase J) (Gentiobiase J)
ruditapes_lrc32560	metabolic process	other metabolic processes	P	Probable beta-glucosidase J (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase J) (Cellobiase J) (Gentiobiase J)
ruditapes_lrc36702	cellulose catabolic process	other metabolic processes	P	Probable beta-glucosidase J (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase J) (Cellobiase J) (Gentiobiase J)
ruditapes_lrc32560	polysaccharide catabolic process	other metabolic processes	P	Probable beta-glucosidase J (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase J) (Cellobiase J) (Gentiobiase J)
ruditapes_lrc36702	polysaccharide catabolic process	other metabolic processes	P	Probable beta-glucosidase J (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase J) (Cellobiase J) (Gentiobiase J)
ruditapes_lrc36702	carbohydrate metabolic process	other metabolic processes	P	Probable beta-glucosidase J (EC 3.2.1.21) (Beta-D-glucoside glucohydrolase J) (Cellobiase J) (Gentiobiase J)
ruditapes2_c1493	response to stress	stress response	P	Uncharacterized protein AN7484
ruditapes_c29271	cell division	other biological processes	P	Cell division cycle protein 123
ruditapes_c29271	cell cycle	cell cycle and proliferation	P	Cell division cycle protein 123
ruditapes2_c2335	chromatin silencing at telomere	RNA metabolism	P	Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48)
ruditapes2_c2335	histone acetylation	protein metabolism	P	Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48)
ruditapes2_c2335	histone acetylation	cell organization and biogenesis	P	Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48)
ruditapes2_c2335	response to DNA damage stimulus	stress response	P	Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48)
ruditapes2_c2335	chromatin modification	cell organization and biogenesis	P	Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48)
ruditapes2_c2335	DNA repair	stress response	P	Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48)
ruditapes2_c2335	DNA repair	DNA metabolism	P	Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48)
ruditapes_lrc32852	protein transport	transport	P	Autophagy-related protein 2
ruditapes_lrc14394	transport	transport	P	Autophagy-related protein 2
ruditapes_lrc14394	protein transport	transport	P	Autophagy-related protein 2
ruditapes_lrc32852	transport	transport	P	Autophagy-related protein 2
ruditapes2_lrc3403	protein transport	transport	P	Autophagy-related protein 2
ruditapes2_lrc3403	transport	transport	P	Autophagy-related protein 2
ruditapes_lrc38492	transport	transport	P	Autophagy-related protein 2
ruditapes_lrc38492	protein transport	transport	P	Autophagy-related protein 2
ruditapes_lrc21428	transport	transport	P	Autophagy-related protein 2
ruditapes_lrc38492	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes_lrc21428	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes_lrc14394	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes_lrc21428	protein transport	transport	P	Autophagy-related protein 2
ruditapes_lrc32852	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes2_lrc3403	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes_lrc31358	response to stress	stress response	P	Stress response protein nst1
ruditapes_c19496	rRNA processing	RNA metabolism	P	Nucleolar protein 9 (Pumilio domain-containing protein nop9)
ruditapes_c19496	ribosome biogenesis	other biological processes	P	Nucleolar protein 9 (Pumilio domain-containing protein nop9)
ruditapes_c10802	phosphorylation	other metabolic processes	P	Polynucleotide 5'-hydroxyl-kinase grc3 (EC 2.7.1.-)
ruditapes_c10802	rRNA processing	RNA metabolism	P	Polynucleotide 5'-hydroxyl-kinase grc3 (EC 2.7.1.-)
ruditapes_c25829	cellular amino acid biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c25829	cellular biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c12372	cellular biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c12372	methionine biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c25829	cellular metabolic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c25829	methionine biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c12372	methionine salvage	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c12372	cellular metabolic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c25829	methionine salvage	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c12372	cellular amino acid biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) (Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein)
ruditapes_c13294	meiosis	cell cycle and proliferation	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c13294	DNA metabolic process	DNA metabolism	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c13294	DNA recombination	DNA metabolism	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c13294	response to DNA damage stimulus	stress response	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c13294	DNA repair	stress response	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c13294	DNA repair	DNA metabolism	P	Crossover junction endonuclease mus81 (EC 3.1.22.-)
ruditapes_c23255	heme biosynthetic process	other metabolic processes	P	"Protoheme IX farnesyltransferase, mitochondrial (EC 2.5.1.-) (Heme O synthase)"
ruditapes_c23255	heme O biosynthetic process	other metabolic processes	P	"Protoheme IX farnesyltransferase, mitochondrial (EC 2.5.1.-) (Heme O synthase)"
ruditapes_c12959	heme O biosynthetic process	other metabolic processes	P	"Protoheme IX farnesyltransferase, mitochondrial (EC 2.5.1.-) (Heme O synthase)"
ruditapes_c12959	heme biosynthetic process	other metabolic processes	P	"Protoheme IX farnesyltransferase, mitochondrial (EC 2.5.1.-) (Heme O synthase)"
ruditapes_c8910	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase tel1 (EC 2.7.11.1) (ATM homolog) (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1)
ruditapes_c8910	chromatin modification	cell organization and biogenesis	P	Serine/threonine-protein kinase tel1 (EC 2.7.11.1) (ATM homolog) (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1)
ruditapes_c8910	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase tel1 (EC 2.7.11.1) (ATM homolog) (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1)
ruditapes_c8910	DNA repair	stress response	P	Serine/threonine-protein kinase tel1 (EC 2.7.11.1) (ATM homolog) (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1)
ruditapes_c8910	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase tel1 (EC 2.7.11.1) (ATM homolog) (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1)
ruditapes_lrc23736	nucleosome assembly	cell organization and biogenesis	P	Histone H2A.V (H2A.F/Z)
ruditapes_c22155	regulation of interleukin-6 biosynthetic process	other metabolic processes	P	Interleukin-17F (IL-17F)
ruditapes_c22155	inflammatory response	stress response	P	Interleukin-17F (IL-17F)
ruditapes_c22155	cytokine biosynthetic process	other metabolic processes	P	Interleukin-17F (IL-17F)
ruditapes_c22155	cartilage development	developmental processes	P	Interleukin-17F (IL-17F)
ruditapes_c22155	proteoglycan metabolic process	other metabolic processes	P	Interleukin-17F (IL-17F)
ruditapes_c22155	regulation of interleukin-2 biosynthetic process	other metabolic processes	P	Interleukin-17F (IL-17F)
ruditapes_c22155	regulation of interleukin-8 biosynthetic process	other metabolic processes	P	Interleukin-17F (IL-17F)
ruditapes_c22155	lymphotoxin A biosynthetic process	other metabolic processes	P	Interleukin-17F (IL-17F)
ruditapes_c22155	regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	Interleukin-17F (IL-17F)
ruditapes_c22155	regulation of granulocyte macrophage colony-stimulating factor biosynthetic process	other metabolic processes	P	Interleukin-17F (IL-17F)
ruditapes_c22155	negative regulation of angiogenesis	developmental processes	P	Interleukin-17F (IL-17F)
ruditapes_c22155	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Interleukin-17F (IL-17F)
ruditapes_c17821	proteolysis	protein metabolism	P	Probable signal peptidase complex subunit 2 (EC 3.4.-.-) (Microsomal signal peptidase 25 kDa subunit) (SPase 25 kDa subunit)
ruditapes_c17821	signal peptide processing	protein metabolism	P	Probable signal peptidase complex subunit 2 (EC 3.4.-.-) (Microsomal signal peptidase 25 kDa subunit) (SPase 25 kDa subunit)
ruditapes_c29297	response to DNA damage stimulus	stress response	P	INO80 complex subunit C
ruditapes_c29297	DNA repair	stress response	P	INO80 complex subunit C
ruditapes_c29297	DNA repair	DNA metabolism	P	INO80 complex subunit C
ruditapes_c29297	DNA recombination	DNA metabolism	P	INO80 complex subunit C
ruditapes_c29297	"transcription, DNA-dependent"	RNA metabolism	P	INO80 complex subunit C
ruditapes_c29297	biological_process	other biological processes	P	INO80 complex subunit C
ruditapes_c29297	"regulation of transcription, DNA-dependent"	RNA metabolism	P	INO80 complex subunit C
ruditapes_c8305	cell adhesion	cell adhesion	P	T-cell surface protein tactile (Cell surface antigen CD96) (T cell-activated increased late expression protein) (CD antigen CD96)
ruditapes_c26069	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Complex I-39kD) (CI-39kD) (NADH-ubiquinone oxidoreductase 39 kDa subunit) (Sperm flagella protein 3)"
ruditapes_c39280	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Complex I-39kD) (CI-39kD) (NADH-ubiquinone oxidoreductase 39 kDa subunit) (Sperm flagella protein 3)"
ruditapes_c26069	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Complex I-39kD) (CI-39kD) (NADH-ubiquinone oxidoreductase 39 kDa subunit) (Sperm flagella protein 3)"
ruditapes_c39280	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Complex I-39kD) (CI-39kD) (NADH-ubiquinone oxidoreductase 39 kDa subunit) (Sperm flagella protein 3)"
ruditapes_c7374	apoptosis	death	P	E3 ubiquitin-protein ligase TRIM69 (EC 6.3.2.-) (RING finger protein 36) (Tripartite motif-containing protein 69)
ruditapes_c23058	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.4.19.12) (Deubiquitinating enzyme 13) (Ubiquitin thioesterase 13) (Ubiquitin-specific-processing protease 13)
ruditapes_c23058	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.4.19.12) (Deubiquitinating enzyme 13) (Ubiquitin thioesterase 13) (Ubiquitin-specific-processing protease 13)
ruditapes_c23058	biological_process	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.4.19.12) (Deubiquitinating enzyme 13) (Ubiquitin thioesterase 13) (Ubiquitin-specific-processing protease 13)
ruditapes_c27786	lipid catabolic process	other metabolic processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 (E-NPP 6) (NPP-6) (EC 3.1.4.-) (EC 3.1.4.38) (Choline-specific glycerophosphodiester phosphodiesterase) (Glycerophosphocholine cholinephosphodiesterase) (GPC-Cpde)
ruditapes_c27786	metabolic process	other metabolic processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 (E-NPP 6) (NPP-6) (EC 3.1.4.-) (EC 3.1.4.38) (Choline-specific glycerophosphodiester phosphodiesterase) (Glycerophosphocholine cholinephosphodiesterase) (GPC-Cpde)
ruditapes_c13001	protein transport	transport	P	60S ribosomal export protein NMD3
ruditapes_c13001	transport	transport	P	60S ribosomal export protein NMD3
ruditapes2_c1976	biological_process	other biological processes	P	UPF0691 protein C9orf116 homolog (p53-induced expression in RB-null cells protein 1) (Pierce1)
ruditapes_c2361	defense response to Gram-positive bacterium	stress response	P	Defensin
ruditapes_c2361	defense response	stress response	P	Defensin
ruditapes_c2361	defense response to bacterium	stress response	P	Defensin
ruditapes_c2361	defense response to Gram-negative bacterium	stress response	P	Defensin
ruditapes_c2361	innate immune response	stress response	P	Defensin
ruditapes_c13275	translation	protein metabolism	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1)
ruditapes_c13275	translational termination	protein metabolism	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1)
ruditapes_c13275	translational termination	cell organization and biogenesis	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1)
ruditapes_c15021	methylation	other metabolic processes	P	Methyltransferase-like protein 10 (EC 2.1.1.-)
ruditapes2_c5647	protein folding	protein metabolism	P	Prefoldin subunit 1
ruditapes2_c4815	protein folding	protein metabolism	P	Prefoldin subunit 1
ruditapes2_c693	protein folding	protein metabolism	P	Prefoldin subunit 1
ruditapes_s39274	protein folding	protein metabolism	P	Prefoldin subunit 1
ruditapes2_c5183	protein folding	protein metabolism	P	Prefoldin subunit 1
ruditapes2_c5769	protein folding	protein metabolism	P	Prefoldin subunit 1
ruditapes_c24431	RNA processing	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes2_c1237	RNA splicing	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c3883	mRNA transport	transport	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c3883	RNA splicing	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c24431	regulation of translation	protein metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes2_c1237	regulation of translation	protein metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c24431	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes2_c1237	transport	transport	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes2_c1237	mRNA transport	transport	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c24431	transport	transport	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c3883	RNA processing	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes2_c1237	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c3883	mRNA processing	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes2_c1237	mRNA processing	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c24431	mRNA transport	transport	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c24431	mRNA processing	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c24431	RNA splicing	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes2_c1237	RNA processing	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c3883	transport	transport	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c3883	regulation of translation	protein metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c3883	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	RNA-binding protein 8A (RNA-binding motif protein 8A) (Ribonucleoprotein RBM8A)
ruditapes_c17830	GTP catabolic process	other metabolic processes	P	Interferon-induced guanylate-binding protein 1 (GTP-binding protein 1) (GBP-1) (Guanine nucleotide-binding protein 1)
ruditapes_c10968	phosphoinositide-mediated signaling	signal transduction	P	Phosphatidylinositol 3-kinase catalytic subunit type 3 (PI3-kinase type 3) (PI3K type 3) (PtdIns-3-kinase type 3) (EC 2.7.1.137) (Phosphoinositide-3-kinase class 3)
ruditapes_c10968	cell division	other biological processes	P	Phosphatidylinositol 3-kinase catalytic subunit type 3 (PI3-kinase type 3) (PI3K type 3) (PtdIns-3-kinase type 3) (EC 2.7.1.137) (Phosphoinositide-3-kinase class 3)
ruditapes_c10968	phosphoinositide phosphorylation	other metabolic processes	P	Phosphatidylinositol 3-kinase catalytic subunit type 3 (PI3-kinase type 3) (PI3K type 3) (PtdIns-3-kinase type 3) (EC 2.7.1.137) (Phosphoinositide-3-kinase class 3)
ruditapes_c10968	cytokinesis	other biological processes	P	Phosphatidylinositol 3-kinase catalytic subunit type 3 (PI3-kinase type 3) (PI3K type 3) (PtdIns-3-kinase type 3) (EC 2.7.1.137) (Phosphoinositide-3-kinase class 3)
ruditapes_c10968	cell cycle	cell cycle and proliferation	P	Phosphatidylinositol 3-kinase catalytic subunit type 3 (PI3-kinase type 3) (PI3K type 3) (PtdIns-3-kinase type 3) (EC 2.7.1.137) (Phosphoinositide-3-kinase class 3)
ruditapes_c10968	phosphorylation	other metabolic processes	P	Phosphatidylinositol 3-kinase catalytic subunit type 3 (PI3-kinase type 3) (PI3K type 3) (PtdIns-3-kinase type 3) (EC 2.7.1.137) (Phosphoinositide-3-kinase class 3)
ruditapes_c28920	iron-sulfur cluster assembly	other metabolic processes	P	Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog
ruditapes_c8888	negative regulation of peptidase activity	other biological processes	P	Uromodulin-like 1 (Olfactorin)
ruditapes2_c722	negative regulation of peptidase activity	other biological processes	P	Uromodulin-like 1 (Olfactorin)
ruditapes_c33709	cell adhesion	cell adhesion	P	Protocadherin beta-8 (PCDH-beta-8)
ruditapes_c33709	homophilic cell adhesion	cell adhesion	P	Protocadherin beta-8 (PCDH-beta-8)
ruditapes_c27670	cell adhesion	cell adhesion	P	Protocadherin beta-8 (PCDH-beta-8)
ruditapes_c27670	homophilic cell adhesion	cell adhesion	P	Protocadherin beta-8 (PCDH-beta-8)
ruditapes_c24523	biological_process	other biological processes	P	Chondroitin sulfate synthase 3 (EC 2.4.1.175) (EC 2.4.1.226) (Carbohydrate synthase 2) (Chondroitin glucuronyltransferase 3) (Chondroitin synthase 2) (ChSy-2) (Glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase II) (N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase 3) (N-acetylgalactosaminyltransferase 3)
ruditapes_c18773	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Scm-like with four MBT domains protein 2
ruditapes_c31895	cell division	other biological processes	P	Centrosomal protein of 164 kDa (Cep164)
ruditapes_c31895	DNA repair	stress response	P	Centrosomal protein of 164 kDa (Cep164)
ruditapes_c31895	DNA repair	DNA metabolism	P	Centrosomal protein of 164 kDa (Cep164)
ruditapes_c31895	biological_process	other biological processes	P	Centrosomal protein of 164 kDa (Cep164)
ruditapes_c31895	mitosis	cell cycle and proliferation	P	Centrosomal protein of 164 kDa (Cep164)
ruditapes_c31895	mitosis	cell organization and biogenesis	P	Centrosomal protein of 164 kDa (Cep164)
ruditapes_c31895	response to DNA damage stimulus	stress response	P	Centrosomal protein of 164 kDa (Cep164)
ruditapes_c31895	cell cycle	cell cycle and proliferation	P	Centrosomal protein of 164 kDa (Cep164)
ruditapes_c20118	biological_process	other biological processes	P	Pecanex-like protein 2
ruditapes_c7469	response to DNA damage stimulus	stress response	P	Zinc finger FYVE domain-containing protein 26
ruditapes_c7469	DNA repair	stress response	P	Zinc finger FYVE domain-containing protein 26
ruditapes_c7469	DNA repair	DNA metabolism	P	Zinc finger FYVE domain-containing protein 26
ruditapes_c7469	double-strand break repair via homologous recombination	DNA metabolism	P	Zinc finger FYVE domain-containing protein 26
ruditapes_c7469	cell division	other biological processes	P	Zinc finger FYVE domain-containing protein 26
ruditapes_c7469	cell cycle	cell cycle and proliferation	P	Zinc finger FYVE domain-containing protein 26
ruditapes_c7469	cytokinesis	other biological processes	P	Zinc finger FYVE domain-containing protein 26
ruditapes_c7469	double-strand break repair via homologous recombination	stress response	P	Zinc finger FYVE domain-containing protein 26
ruditapes_c8499	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	histone H3-K9 methylation	protein metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	histone H3-K9 methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	peptidyl-lysine monomethylation	protein metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	DNA methylation	DNA metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	embryonic development	developmental processes	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	histone methylation	protein metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	histone methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	peptidyl-lysine dimethylation	protein metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c8499	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Lysine N-methyltransferase 1D)
ruditapes_c24287	oxidation reduction	other metabolic processes	P	Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) (Flavorubredoxin reductase) (FlRd-reductase) (FlavoRb reductase)
ruditapes2_lrc4836	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4836	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4836	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4836	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4836	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c13555	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c13555	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c2481	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 1 (FBPase class 1) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1)"
ruditapes_c18634	transmembrane transport	transport	P	S-type anion channel SLAH1 (SLAC1-homolog protein 1)
ruditapes_c18634	ion transport	transport	P	S-type anion channel SLAH1 (SLAC1-homolog protein 1)
ruditapes_c18634	transport	transport	P	S-type anion channel SLAH1 (SLAC1-homolog protein 1)
ruditapes_c7785	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Serine-threonine kinase receptor-associated protein
ruditapes_c7785	negative regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	Serine-threonine kinase receptor-associated protein
ruditapes_c7785	mRNA processing	RNA metabolism	P	Serine-threonine kinase receptor-associated protein
ruditapes_c7785	RNA splicing	RNA metabolism	P	Serine-threonine kinase receptor-associated protein
ruditapes_c14859	proteolysis	protein metabolism	P	Cathepsin K (EC 3.4.22.38)
ruditapes_c15240	apoptosis	death	P	Growth arrest and DNA damage-inducible protein GADD45 beta
ruditapes_c15240	multicellular organismal development	developmental processes	P	Growth arrest and DNA damage-inducible protein GADD45 beta
ruditapes_c15240	regulation of cell cycle	cell cycle and proliferation	P	Growth arrest and DNA damage-inducible protein GADD45 beta
ruditapes_c15240	cell differentiation	other biological processes	P	Growth arrest and DNA damage-inducible protein GADD45 beta
ruditapes_c15240	activation of MAPKK activity	signal transduction	P	Growth arrest and DNA damage-inducible protein GADD45 beta
ruditapes_c15240	activation of MAPKK activity	protein metabolism	P	Growth arrest and DNA damage-inducible protein GADD45 beta
ruditapes_c15240	negative regulation of protein kinase activity	other metabolic processes	P	Growth arrest and DNA damage-inducible protein GADD45 beta
ruditapes_c15240	response to stress	stress response	P	Growth arrest and DNA damage-inducible protein GADD45 beta
ruditapes_c32081	"transcription, DNA-dependent"	RNA metabolism	P	Vacuolar protein sorting-associated protein 72 homolog (Transcription factor-like 1)
ruditapes_c32081	chromatin modification	cell organization and biogenesis	P	Vacuolar protein sorting-associated protein 72 homolog (Transcription factor-like 1)
ruditapes_c32081	somatic stem cell maintenance	other biological processes	P	Vacuolar protein sorting-associated protein 72 homolog (Transcription factor-like 1)
ruditapes_c32081	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Vacuolar protein sorting-associated protein 72 homolog (Transcription factor-like 1)
ruditapes_c14980	biosynthetic process	other metabolic processes	P	1-aminocyclopropane-1-carboxylate synthase-like protein 1 (ACC synthase-like protein 1)
ruditapes_c14980	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	1-aminocyclopropane-1-carboxylate synthase-like protein 1 (ACC synthase-like protein 1)
ruditapes2_c2247	proteolysis	protein metabolism	P	Proteasome subunit beta type-2 (EC 3.4.25.1)
ruditapes2_c2247	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-2 (EC 3.4.25.1)
ruditapes2_c389	"regulation of transcription, DNA-dependent"	RNA metabolism	P	snRNA-activating protein complex subunit 3 (SNAPc subunit 3) (Small nuclear RNA-activating complex polypeptide 3)
ruditapes2_c389	"transcription, DNA-dependent"	RNA metabolism	P	snRNA-activating protein complex subunit 3 (SNAPc subunit 3) (Small nuclear RNA-activating complex polypeptide 3)
ruditapes_c7500	GTP catabolic process	other metabolic processes	P	Mitochondrial Rho GTPase 2 (MIRO-2) (EC 3.6.5.-) (Ras homolog gene family member T2)
ruditapes_c7500	small GTPase mediated signal transduction	signal transduction	P	Mitochondrial Rho GTPase 2 (MIRO-2) (EC 3.6.5.-) (Ras homolog gene family member T2)
ruditapes_c7500	mitochondrion transport along microtubule	transport	P	Mitochondrial Rho GTPase 2 (MIRO-2) (EC 3.6.5.-) (Ras homolog gene family member T2)
ruditapes_c7500	cellular homeostasis	other biological processes	P	Mitochondrial Rho GTPase 2 (MIRO-2) (EC 3.6.5.-) (Ras homolog gene family member T2)
ruditapes_c7500	apoptosis	death	P	Mitochondrial Rho GTPase 2 (MIRO-2) (EC 3.6.5.-) (Ras homolog gene family member T2)
ruditapes_lrc18154	biological_process	other biological processes	P	Seipin (Bernardinelli-Seip congenital lipodystrophy type 2 protein homolog)
ruditapes_c15989	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Ceramide synthase 4 (CerS4) (LAG1 longevity assurance homolog 4)
ruditapes_c15989	ceramide biosynthetic process	other metabolic processes	P	Ceramide synthase 4 (CerS4) (LAG1 longevity assurance homolog 4)
ruditapes_c15989	lipid biosynthetic process	other metabolic processes	P	Ceramide synthase 4 (CerS4) (LAG1 longevity assurance homolog 4)
ruditapes_c15989	sphingolipid biosynthetic process	other metabolic processes	P	Ceramide synthase 4 (CerS4) (LAG1 longevity assurance homolog 4)
ruditapes_c30602	vasodilation	other biological processes	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	ion transport	transport	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	regulation of cardiac muscle contraction	other biological processes	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	positive regulation of calcium ion transport into cytosol	transport	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	response to fluid shear stress	stress response	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	regulation of blood pressure	other biological processes	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	transport	transport	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	regulation of apoptosis	death	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	regulation of excitatory postsynaptic membrane potential	cell-cell signaling	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	cation transport	transport	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	relaxation of cardiac muscle	other biological processes	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	positive regulation of calcium-mediated signaling	signal transduction	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	negative regulation of cardiac muscle hypertrophy	other biological processes	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	response to ATP	other biological processes	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	nitric oxide biosynthetic process	other metabolic processes	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	signal transduction	signal transduction	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	membrane depolarization	other biological processes	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c30602	calcium ion transport	transport	P	P2X purinoceptor 4 (P2X4) (ATP receptor) (Purinergic receptor)
ruditapes_c2540	oxidation reduction	other metabolic processes	P	"Dihydroorotate dehydrogenase (quinone), mitochondrial (DHOdehase) (EC 1.3.5.2) (Dihydroorotate oxidase)"
ruditapes_c2540	UMP biosynthetic process	other metabolic processes	P	"Dihydroorotate dehydrogenase (quinone), mitochondrial (DHOdehase) (EC 1.3.5.2) (Dihydroorotate oxidase)"
ruditapes_c2540	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	"Dihydroorotate dehydrogenase (quinone), mitochondrial (DHOdehase) (EC 1.3.5.2) (Dihydroorotate oxidase)"
ruditapes_c2540	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	"Dihydroorotate dehydrogenase (quinone), mitochondrial (DHOdehase) (EC 1.3.5.2) (Dihydroorotate oxidase)"
ruditapes_c27617	DNA repair	stress response	P	Cell cycle checkpoint control protein RAD9B (DNA repair exonuclease rad9 homolog B)
ruditapes_c27617	DNA repair	DNA metabolism	P	Cell cycle checkpoint control protein RAD9B (DNA repair exonuclease rad9 homolog B)
ruditapes_c17940	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor-like protein 15
ruditapes_c22517	cation transport	transport	P	Sideroflexin-2
ruditapes_c22517	iron ion homeostasis	other biological processes	P	Sideroflexin-2
ruditapes_c22517	transmembrane transport	transport	P	Sideroflexin-2
ruditapes_c22517	ion transport	transport	P	Sideroflexin-2
ruditapes_c22517	transport	transport	P	Sideroflexin-2
ruditapes_c22390	carbohydrate metabolic process	other metabolic processes	P	Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)
ruditapes_c22390	hexose metabolic process	other metabolic processes	P	Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)
ruditapes_c19266	erythrocyte differentiation	developmental processes	P	Solute carrier family 25 member 38
ruditapes_c19266	transport	transport	P	Solute carrier family 25 member 38
ruditapes2_c5317	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes2_c5317	apoptosis	death	P	Death-associated protein 1 (DAP-1)
ruditapes2_c5317	cellular response to amino acid starvation	stress response	P	Death-associated protein 1 (DAP-1)
ruditapes2_c5317	negative regulation of autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes2_c5317	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Death-associated protein 1 (DAP-1)
ruditapes2_c5317	induction of apoptosis by extracellular signals	death	P	Death-associated protein 1 (DAP-1)
ruditapes2_c5317	autophagy	other metabolic processes	P	Death-associated protein 1 (DAP-1)
ruditapes2_c5317	activation of caspase activity	death	P	Death-associated protein 1 (DAP-1)
ruditapes_c12968	"tRNA splicing, via endonucleolytic cleavage and ligation"	RNA metabolism	P	tRNA 2'-phosphotransferase 1 (EC 2.7.1.160)
ruditapes_c12968	tRNA processing	RNA metabolism	P	tRNA 2'-phosphotransferase 1 (EC 2.7.1.160)
ruditapes_c22691	multicellular organismal development	developmental processes	P	Transmembrane anterior posterior transformation protein 1 homolog
ruditapes2_c613	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit I (eIF3i) (Eukaryotic translation initiation factor 3 subunit 2) (eIF-3-beta) (eIF3 p36)
ruditapes2_c613	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit I (eIF3i) (Eukaryotic translation initiation factor 3 subunit 2) (eIF-3-beta) (eIF3 p36)
ruditapes2_c1366	regulation of muscle contraction	other biological processes	P	Heat shock protein beta-6 (HspB6)
ruditapes2_c1366	response to stress	stress response	P	Heat shock protein beta-6 (HspB6)
ruditapes2_c2835	transport	transport	P	Lysosomal-associated transmembrane protein 4A
ruditapes2_c1826	cell adhesion	cell adhesion	P	Protocadherin Fat 2 (FAT tumor suppressor homolog 2)
ruditapes2_c1826	epithelial cell migration	other biological processes	P	Protocadherin Fat 2 (FAT tumor suppressor homolog 2)
ruditapes2_c1826	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 2 (FAT tumor suppressor homolog 2)
ruditapes2_c1465	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 2 (FAT tumor suppressor homolog 2)
ruditapes2_c1465	cell adhesion	cell adhesion	P	Protocadherin Fat 2 (FAT tumor suppressor homolog 2)
ruditapes2_c1465	epithelial cell migration	other biological processes	P	Protocadherin Fat 2 (FAT tumor suppressor homolog 2)
ruditapes_c7332	transport	transport	P	Trafficking protein particle complex subunit 5
ruditapes_c14082	vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 5
ruditapes_c7332	vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 5
ruditapes_c14082	transport	transport	P	Trafficking protein particle complex subunit 5
ruditapes2_c1179	oxidation reduction	other metabolic processes	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B)
ruditapes2_c1179	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B)
ruditapes2_c1179	chromatin modification	cell organization and biogenesis	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B)
ruditapes2_c1179	"transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B)
ruditapes2_c1179	"histone H3-K4 demethylation, trimethyl-H3-K4-specific"	protein metabolism	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B)
ruditapes2_c1179	"histone H3-K4 demethylation, trimethyl-H3-K4-specific"	cell organization and biogenesis	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B)
ruditapes2_c1179	histone H3-K4 demethylation	protein metabolism	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B)
ruditapes2_c1179	histone H3-K4 demethylation	cell organization and biogenesis	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B)
ruditapes2_c2757	DNA double-strand break processing	stress response	P	Ubiquitin-conjugating enzyme E2 variant 2
ruditapes2_c2757	DNA double-strand break processing	DNA metabolism	P	Ubiquitin-conjugating enzyme E2 variant 2
ruditapes_c14792	positive regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 23
ruditapes_c14792	regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 23
ruditapes2_c427	regulation of catalytic activity	other biological processes	P	26S proteasome non-ATPase regulatory subunit 1 (26S proteasome regulatory subunit RPN2) (26S proteasome regulatory subunit S1)
ruditapes2_c427	regulation of protein catabolic process	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 1 (26S proteasome regulatory subunit RPN2) (26S proteasome regulatory subunit S1)
ruditapes_c11195	apoptosis	death	P	G2/M phase-specific E3 ubiquitin-protein ligase (EC 6.3.2.-)
ruditapes_c11195	protein modification process	protein metabolism	P	G2/M phase-specific E3 ubiquitin-protein ligase (EC 6.3.2.-)
ruditapes_c11195	multicellular organismal development	developmental processes	P	G2/M phase-specific E3 ubiquitin-protein ligase (EC 6.3.2.-)
ruditapes_c2988	gluconeogenesis	other metabolic processes	P	Glucose-6-phosphate isomerase 2 (GPI 2) (EC 5.3.1.9) (Phosphoglucose isomerase 2) (PGI 2) (Phosphohexose isomerase 2) (PHI 2)
ruditapes_c2988	glycolysis	other metabolic processes	P	Glucose-6-phosphate isomerase 2 (GPI 2) (EC 5.3.1.9) (Phosphoglucose isomerase 2) (PGI 2) (Phosphohexose isomerase 2) (PHI 2)
ruditapes_c20516	queuosine biosynthetic process	RNA metabolism	P	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA)
ruditapes_c12612	oxidation reduction	other metabolic processes	P	Aldehyde oxidase (EC 1.2.3.1)
ruditapes_c1004	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c1004	glucose catabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c1004	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c18021	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c18021	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c18021	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c29350	metabolic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c29350	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c8781	metabolic process	other metabolic processes	P	Beta-galactosidase LacZ (Beta-gal) (EC 3.2.1.23)
ruditapes_c8781	carbohydrate metabolic process	other metabolic processes	P	Beta-galactosidase LacZ (Beta-gal) (EC 3.2.1.23)
ruditapes_lrc31280	cellular amino acid biosynthetic process	other metabolic processes	P	N-acetyldiaminopimelate deacetylase (EC 3.5.1.47)
ruditapes_lrc31280	lysine biosynthetic process	other metabolic processes	P	N-acetyldiaminopimelate deacetylase (EC 3.5.1.47)
ruditapes_lrc31280	diaminopimelate biosynthetic process	other metabolic processes	P	N-acetyldiaminopimelate deacetylase (EC 3.5.1.47)
ruditapes_lrc31280	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	N-acetyldiaminopimelate deacetylase (EC 3.5.1.47)
ruditapes_lrc31280	metabolic process	other metabolic processes	P	N-acetyldiaminopimelate deacetylase (EC 3.5.1.47)
ruditapes_c15984	mismatch repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c15984	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c15984	DNA repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c15984	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c15984	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutS
ruditapes_c30340	translation	protein metabolism	P	30S ribosomal protein S19
ruditapes_lrc33798	adenine catabolic process	other metabolic processes	P	Adenine deaminase (Adenase) (Adenine aminase) (EC 3.5.4.2)
ruditapes_s36250	adenine catabolic process	other metabolic processes	P	Adenine deaminase (Adenase) (Adenine aminase) (EC 3.5.4.2)
ruditapes_s38137	adenine catabolic process	other metabolic processes	P	Adenine deaminase (Adenase) (Adenine aminase) (EC 3.5.4.2)
ruditapes2_lrc4171	adenine catabolic process	other metabolic processes	P	Adenine deaminase (Adenase) (Adenine aminase) (EC 3.5.4.2)
ruditapes_s39154	cellular amino acid biosynthetic process	other metabolic processes	P	"Enolase-phosphatase E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane phosphatase)"
ruditapes_s39154	metabolic process	other metabolic processes	P	"Enolase-phosphatase E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane phosphatase)"
ruditapes_s39154	methionine biosynthetic process	other metabolic processes	P	"Enolase-phosphatase E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane phosphatase)"
ruditapes_s39154	methionine salvage	other metabolic processes	P	"Enolase-phosphatase E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane phosphatase)"
ruditapes_c18984	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c18984	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes2_c762	purine nucleotide metabolic process	other metabolic processes	P	Guanylate kinase (EC 2.7.4.8) (GMP kinase)
ruditapes2_c762	phosphorylation	other metabolic processes	P	Guanylate kinase (EC 2.7.4.8) (GMP kinase)
ruditapes2_lrc3907	protein secretion	transport	P	Complement C1q tumor necrosis factor-related protein 5
ruditapes2_c5527	protein secretion	transport	P	Complement C1q tumor necrosis factor-related protein 5
ruditapes_c19468	protein secretion	transport	P	Complement C1q tumor necrosis factor-related protein 5
ruditapes_lrc24047	protein secretion	transport	P	Complement C1q tumor necrosis factor-related protein 5
ruditapes_c31611	protein secretion	transport	P	Complement C1q tumor necrosis factor-related protein 5
ruditapes_c11343	proteolysis	protein metabolism	P	Sentrin-specific protease 8 (EC 3.4.22.68) (Deneddylase-1) (NEDD8-specific protease 1) (Sentrin/SUMO-specific protease SENP8)
ruditapes_c13088	protein ubiquitination	protein metabolism	P	"WD repeat, SAM and U-box domain-containing protein 1"
ruditapes_c27803	lipid biosynthetic process	other metabolic processes	P	Diacylglycerol O-acyltransferase 2 (EC 2.3.1.20) (Acyl-CoA retinol O-fatty-acyltransferase) (ARAT) (Retinol O-fatty-acyltransferase) (EC 2.3.1.76) (Diglyceride acyltransferase 2)
ruditapes_c27803	triglyceride biosynthetic process	other metabolic processes	P	Diacylglycerol O-acyltransferase 2 (EC 2.3.1.20) (Acyl-CoA retinol O-fatty-acyltransferase) (ARAT) (Retinol O-fatty-acyltransferase) (EC 2.3.1.76) (Diglyceride acyltransferase 2)
ruditapes_c27803	glycerol metabolic process	other metabolic processes	P	Diacylglycerol O-acyltransferase 2 (EC 2.3.1.20) (Acyl-CoA retinol O-fatty-acyltransferase) (ARAT) (Retinol O-fatty-acyltransferase) (EC 2.3.1.76) (Diglyceride acyltransferase 2)
ruditapes_c27803	lipid metabolic process	other metabolic processes	P	Diacylglycerol O-acyltransferase 2 (EC 2.3.1.20) (Acyl-CoA retinol O-fatty-acyltransferase) (ARAT) (Retinol O-fatty-acyltransferase) (EC 2.3.1.76) (Diglyceride acyltransferase 2)
ruditapes_lrc24985	fatty acid metabolic process	other metabolic processes	P	Acyl-coenzyme A amino acid N-acyltransferase 2 (EC 2.3.1.-)
ruditapes_lrc24985	lipid metabolic process	other metabolic processes	P	Acyl-coenzyme A amino acid N-acyltransferase 2 (EC 2.3.1.-)
ruditapes_lrc24985	acyl-CoA metabolic process	other metabolic processes	P	Acyl-coenzyme A amino acid N-acyltransferase 2 (EC 2.3.1.-)
ruditapes_c23116	B cell activation	other biological processes	P	Src kinase-associated phosphoprotein 2
ruditapes_c7367	NAD biosynthetic process	other metabolic processes	P	Putative L-aspartate dehydrogenase (EC 1.4.1.21) (Aspartate dehydrogenase domain-containing protein)
ruditapes_c7367	oxidation reduction	other metabolic processes	P	Putative L-aspartate dehydrogenase (EC 1.4.1.21) (Aspartate dehydrogenase domain-containing protein)
ruditapes_c7367	pyridine nucleotide biosynthetic process	other metabolic processes	P	Putative L-aspartate dehydrogenase (EC 1.4.1.21) (Aspartate dehydrogenase domain-containing protein)
ruditapes_c7367	NADP catabolic process	other metabolic processes	P	Putative L-aspartate dehydrogenase (EC 1.4.1.21) (Aspartate dehydrogenase domain-containing protein)
ruditapes_c11414	metabolic process	other metabolic processes	P	Arylsulfatase J (ASJ) (EC 3.1.6.-)
ruditapes2_c2269	metabolic process	other metabolic processes	P	Arylsulfatase J (ASJ) (EC 3.1.6.-)
ruditapes_c22146	purine base metabolic process	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes_c22146	oxidation reduction	other metabolic processes	P	Uricase (EC 1.7.3.3) (Urate oxidase)
ruditapes2_lrc4264	proteolysis	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Serine protease 12)
ruditapes_c13825	proteolysis	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Serine protease 12)
ruditapes_c13825	zymogen activation	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Serine protease 12)
ruditapes_c15522	proteolysis	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Serine protease 12)
ruditapes2_c1927	zymogen activation	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Serine protease 12)
ruditapes2_c1927	proteolysis	protein metabolism	P	Neurotrypsin (EC 3.4.21.-) (Serine protease 12)
ruditapes_lrc33223	pathogenesis	other biological processes	P	Potassium channel toxin alpha-KTx 4.5
ruditapes_lrc33870	pathogenesis	other biological processes	P	Potassium channel toxin alpha-KTx 4.5
ruditapes_lrc34913	pathogenesis	other biological processes	P	Potassium channel toxin alpha-KTx 4.5
ruditapes_c2700	pathogenesis	other biological processes	P	Potassium channel toxin alpha-KTx 4.5
ruditapes_s37022	pathogenesis	other biological processes	P	Potassium channel toxin alpha-KTx 4.5
ruditapes_s35770	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_s35770	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_s35770	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_s35770	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_s35770	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c19688	translation	protein metabolism	P	30S ribosomal protein S16
ruditapes_c7426	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Dihydroorotase (DHOase) (EC 3.5.2.3)
ruditapes2_c2550	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c2550	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c2550	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c2550	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c2550	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c21948	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c21948	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c14860	transport	transport	P	Phosphate import ATP-binding protein PstB (EC 3.6.3.27) (ABC phosphate transporter) (Phosphate-transporting ATPase)
ruditapes_c14860	ATP catabolic process	other metabolic processes	P	Phosphate import ATP-binding protein PstB (EC 3.6.3.27) (ABC phosphate transporter) (Phosphate-transporting ATPase)
ruditapes_c14860	phosphate transport	transport	P	Phosphate import ATP-binding protein PstB (EC 3.6.3.27) (ABC phosphate transporter) (Phosphate-transporting ATPase)
ruditapes_c1440	lipoate biosynthetic process	other metabolic processes	P	Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA)
ruditapes_c30314	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c30314	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c30314	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c30314	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c30314	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c8085	phosphorylation	other metabolic processes	P	"Putative pyruvate, phosphate dikinase regulatory protein (PPDK regulatory protein) (EC 2.7.11.32) (EC 2.7.4.27)"
ruditapes_c11520	two-component signal transduction system (phosphorelay)	signal transduction	P	Histidine protein kinase SaeS (EC 2.7.13.3) (Sensor protein SaeS) (Staphylococcus exoprotein expression protein S)
ruditapes_c11520	phosphorylation	other metabolic processes	P	Histidine protein kinase SaeS (EC 2.7.13.3) (Sensor protein SaeS) (Staphylococcus exoprotein expression protein S)
ruditapes_c11520	pathogenesis	other biological processes	P	Histidine protein kinase SaeS (EC 2.7.13.3) (Sensor protein SaeS) (Staphylococcus exoprotein expression protein S)
ruditapes_c11520	peptidyl-histidine phosphorylation	protein metabolism	P	Histidine protein kinase SaeS (EC 2.7.13.3) (Sensor protein SaeS) (Staphylococcus exoprotein expression protein S)
ruditapes_c11520	signal transduction	signal transduction	P	Histidine protein kinase SaeS (EC 2.7.13.3) (Sensor protein SaeS) (Staphylococcus exoprotein expression protein S)
ruditapes2_c4860	DNA restriction-modification system	DNA metabolism	P	Type-1 restriction enzyme R protein (EC 3.1.21.3) (Type I restriction enzyme R protein)
ruditapes2_c4860	DNA modification	DNA metabolism	P	Type-1 restriction enzyme R protein (EC 3.1.21.3) (Type I restriction enzyme R protein)
ruditapes_c21209	carbohydrate metabolic process	other metabolic processes	P	Phosphoglucomutase (PGM) (EC 5.4.2.2) (Alpha-phosphoglucomutase) (Glucose phosphomutase)
ruditapes_c21209	glucose metabolic process	other metabolic processes	P	Phosphoglucomutase (PGM) (EC 5.4.2.2) (Alpha-phosphoglucomutase) (Glucose phosphomutase)
ruditapes_c7733	DNA topological change	DNA metabolism	P	DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)
ruditapes_c28720	cellular amino acid biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c28720	arginine biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c28720	oxidation reduction	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c28720	cellular amino acid metabolic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c25271	peptidoglycan biosynthetic process	other metabolic processes	P	Aminoacyltransferase FemB (EC 2.3.2.18) (Factor essential for expression of methicillin resistance B) (N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-(N6-triglycine)-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine:glycine glycyltransferase)
ruditapes_c25271	regulation of cell shape	cell organization and biogenesis	P	Aminoacyltransferase FemB (EC 2.3.2.18) (Factor essential for expression of methicillin resistance B) (N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-(N6-triglycine)-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine:glycine glycyltransferase)
ruditapes_c25271	cell wall organization	cell organization and biogenesis	P	Aminoacyltransferase FemB (EC 2.3.2.18) (Factor essential for expression of methicillin resistance B) (N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-(N6-triglycine)-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine:glycine glycyltransferase)
ruditapes_c22053	oxidation reduction	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes_c22053	heme biosynthetic process	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes_c22053	heme a biosynthetic process	other metabolic processes	P	Heme A synthase (HAS) (EC 1.3.-.-) (Cytochrome aa3-controlling protein)
ruditapes_c11649	translation	protein metabolism	P	30S ribosomal protein S3
ruditapes_c11027	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c11027	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c11027	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c25670	mRNA processing	RNA metabolism	P	mRNA cap guanine-N7 methyltransferase 2 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 2) (mRNA cap methyltransferase 2)
ruditapes_c25670	methylation	other metabolic processes	P	mRNA cap guanine-N7 methyltransferase 2 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 2) (mRNA cap methyltransferase 2)
ruditapes_c25670	mRNA capping	RNA metabolism	P	mRNA cap guanine-N7 methyltransferase 2 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 2) (mRNA cap methyltransferase 2)
ruditapes_c31210	biological_process	other biological processes	P	Solute carrier family 25 member 51 (Mitochondrial carrier triple repeat protein 1)
ruditapes_c31210	transport	transport	P	Solute carrier family 25 member 51 (Mitochondrial carrier triple repeat protein 1)
ruditapes_c28283	response to ionizing radiation	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	signal transduction	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	stress response	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	DNA damage checkpoint	stress response	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	cell proliferation	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	response to DNA damage stimulus	stress response	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	death	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	DNA repair	stress response	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	DNA repair	DNA metabolism	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	protein deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	DNA damage checkpoint	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c28283	DNA damage checkpoint	signal transduction	P	Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.4.19.12) (Deubiquitinating enzyme 28) (Ubiquitin thioesterase 28) (Ubiquitin-specific-processing protease 28)
ruditapes_c21512	protein amino acid dephosphorylation	protein metabolism	P	Phospholysine phosphohistidine inorganic pyrophosphate phosphatase (EC 3.1.3.-) (EC 3.6.1.1)
ruditapes_c21512	phosphate metabolic process	other metabolic processes	P	Phospholysine phosphohistidine inorganic pyrophosphate phosphatase (EC 3.1.3.-) (EC 3.6.1.1)
ruditapes_c21512	metabolic process	other metabolic processes	P	Phospholysine phosphohistidine inorganic pyrophosphate phosphatase (EC 3.1.3.-) (EC 3.6.1.1)
ruditapes_c5119	negative regulation of endopeptidase activity	other biological processes	P	Leukocyte elastase inhibitor (Serpin B1)
ruditapes_c5119	negative regulation of peptidase activity	other biological processes	P	Leukocyte elastase inhibitor (Serpin B1)
ruditapes_c5119	regulation of proteolysis	protein metabolism	P	Leukocyte elastase inhibitor (Serpin B1)
ruditapes_c22820	signal transduction	signal transduction	P	Toll-like receptor 9 (CD antigen CD289)
ruditapes_c22820	positive regulation of interferon-gamma biosynthetic process	other metabolic processes	P	Toll-like receptor 9 (CD antigen CD289)
ruditapes_c22820	inflammatory response	stress response	P	Toll-like receptor 9 (CD antigen CD289)
ruditapes_c22820	innate immune response	stress response	P	Toll-like receptor 9 (CD antigen CD289)
ruditapes_c22820	positive regulation of interferon-beta biosynthetic process	other metabolic processes	P	Toll-like receptor 9 (CD antigen CD289)
ruditapes_c22820	positive regulation of interferon-alpha biosynthetic process	other metabolic processes	P	Toll-like receptor 9 (CD antigen CD289)
ruditapes_c22377	transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	metabolic process	other metabolic processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	transformation of host cell by virus	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	apoptosis	death	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	apoptosis	death	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	metabolic process	other metabolic processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	ion transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	ion transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	transformation of host cell by virus	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c22377	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c17987	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c28308	methionine biosynthetic process	other metabolic processes	P	Betaine--homocysteine S-methyltransferase 1 (EC 2.1.1.5)
ruditapes_c28308	methylation	other metabolic processes	P	Betaine--homocysteine S-methyltransferase 1 (EC 2.1.1.5)
ruditapes_lrc36913	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_s39047	signal transduction	signal transduction	P	Melanin-concentrating hormone receptor 1 (MCH receptor 1) (MCH-R1) (MCHR-1) (G-protein coupled receptor 24) (MCH-1R) (MCH1R) (MCHR)
ruditapes_s39047	G-protein coupled receptor protein signaling pathway	signal transduction	P	Melanin-concentrating hormone receptor 1 (MCH receptor 1) (MCH-R1) (MCHR-1) (G-protein coupled receptor 24) (MCH-1R) (MCH1R) (MCHR)
ruditapes_s39047	neuropeptide signaling pathway	signal transduction	P	Melanin-concentrating hormone receptor 1 (MCH receptor 1) (MCH-R1) (MCHR-1) (G-protein coupled receptor 24) (MCH-1R) (MCH1R) (MCHR)
ruditapes_c13519	cell adhesion	cell adhesion	P	Neurocan core protein (Chondroitin sulfate proteoglycan 3)
ruditapes_c13158	cell adhesion	cell adhesion	P	Neurocan core protein (Chondroitin sulfate proteoglycan 3)
ruditapes_lrc22694	cell adhesion	cell adhesion	P	Neurocan core protein (Chondroitin sulfate proteoglycan 3)
ruditapes_c4671	cell adhesion	cell adhesion	P	Neurocan core protein (Chondroitin sulfate proteoglycan 3)
ruditapes_c13736	cell adhesion	cell adhesion	P	Neurocan core protein (Chondroitin sulfate proteoglycan 3)
ruditapes_c11177	cell adhesion	cell adhesion	P	Neurocan core protein (Chondroitin sulfate proteoglycan 3)
ruditapes2_c1139	cell adhesion	cell adhesion	P	Neurocan core protein (Chondroitin sulfate proteoglycan 3)
ruditapes_c23395	dorsal/ventral pattern formation	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	kidney development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	anatomical structure formation involved in morphogenesis	other biological processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	embryonic pattern specification	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation	cell cycle and proliferation	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	"transcription, DNA-dependent"	RNA metabolism	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	anterior/posterior pattern formation	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	neuron migration	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	cell-cell signaling	cell-cell signaling	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	post-embryonic development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	ureteric bud development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	cell differentiation	other biological processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	epithelium development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	cerebellar Purkinje cell differentiation	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	"regulation of transcription, DNA-dependent"	RNA metabolism	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	uterus development	other biological processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	urogenital system development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	fallopian tube development	other biological processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	vagina development	other biological processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	endoderm formation	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	gastrulation with mouth forming second	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	cervix development	other biological processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	pattern specification process	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	transcription from RNA polymerase II promoter	RNA metabolism	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	cerebellum development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	regulation of gene expression	other metabolic processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	spinal cord association neuron differentiation	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	anterior/posterior axis specification	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	positive regulation of embryonic development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	anatomical structure morphogenesis	other biological processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	forebrain regionalization	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	embryonic viscerocranium morphogenesis	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	nervous system development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	head development	other biological processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	retina layer formation	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation	cell-cell signaling	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	embryonic retina morphogenesis in camera-type eye	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	motor axon guidance	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	motor axon guidance	cell organization and biogenesis	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	multicellular organismal development	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c23395	ectoderm formation	developmental processes	P	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)
ruditapes_c13112	thiamin biosynthetic process	other metabolic processes	P	Probable tRNA sulfurtransferase (EC 2.8.1.4) (Sulfur carrier protein ThiS sulfurtransferase) (Thiamine biosynthesis protein ThiI) (tRNA 4-thiouridine synthase)
ruditapes_c13624	tRNA processing	RNA metabolism	P	tRNA-splicing ligase RtcB (EC 6.5.1.-)
ruditapes_c21405	polyamine biosynthetic process	other metabolic processes	P	Probable spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (PAPT) (SPDSY)
ruditapes_c21405	spermidine biosynthetic process	other metabolic processes	P	Probable spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (PAPT) (SPDSY)
ruditapes_c18295	pyridoxal phosphate biosynthetic process	other metabolic processes	P	Pyridoxal biosynthesis lyase PdxS (EC 4.-.-.-)
ruditapes_c18295	thiamin biosynthetic process	other metabolic processes	P	Pyridoxal biosynthesis lyase PdxS (EC 4.-.-.-)
ruditapes_c18295	metabolic process	other metabolic processes	P	Pyridoxal biosynthesis lyase PdxS (EC 4.-.-.-)
ruditapes_c4352	proteolysis	protein metabolism	P	Intracellular protease 1 (EC 3.2.-.-) (Intracellular protease I)
ruditapes2_c344	proteolysis	protein metabolism	P	Intracellular protease 1 (EC 3.2.-.-) (Intracellular protease I)
ruditapes_c12440	DNA repair	stress response	P	Flap endonuclease 1 (FEN-1) (EC 3.1.-.-) (Flap structure-specific endonuclease 1)
ruditapes_c12440	DNA repair	DNA metabolism	P	Flap endonuclease 1 (FEN-1) (EC 3.1.-.-) (Flap structure-specific endonuclease 1)
ruditapes_c12440	response to DNA damage stimulus	stress response	P	Flap endonuclease 1 (FEN-1) (EC 3.1.-.-) (Flap structure-specific endonuclease 1)
ruditapes_c12440	DNA replication	DNA metabolism	P	Flap endonuclease 1 (FEN-1) (EC 3.1.-.-) (Flap structure-specific endonuclease 1)
ruditapes2_c4682	protein modification process	protein metabolism	P	Probable hydrogenase nickel incorporation protein HypA
ruditapes_c21350	ATP biosynthetic process	other metabolic processes	P	V-type ATP synthase subunit F (V-ATPase subunit F)
ruditapes_c21350	ion transport	transport	P	V-type ATP synthase subunit F (V-ATPase subunit F)
ruditapes_c21350	proton transport	transport	P	V-type ATP synthase subunit F (V-ATPase subunit F)
ruditapes_c21350	transport	transport	P	V-type ATP synthase subunit F (V-ATPase subunit F)
ruditapes_c21350	ATP hydrolysis coupled proton transport	transport	P	V-type ATP synthase subunit F (V-ATPase subunit F)
ruditapes2_c2842	glutamyl-tRNA aminoacylation	protein metabolism	P	"Probable glutamate--tRNA ligase, mitochondrial (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)"
ruditapes2_c2842	glutamyl-tRNA aminoacylation	RNA metabolism	P	"Probable glutamate--tRNA ligase, mitochondrial (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)"
ruditapes2_c2842	tRNA aminoacylation for protein translation	protein metabolism	P	"Probable glutamate--tRNA ligase, mitochondrial (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)"
ruditapes2_c2842	tRNA aminoacylation for protein translation	RNA metabolism	P	"Probable glutamate--tRNA ligase, mitochondrial (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)"
ruditapes2_c2842	tRNA aminoacylation	RNA metabolism	P	"Probable glutamate--tRNA ligase, mitochondrial (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)"
ruditapes2_c2842	translation	protein metabolism	P	"Probable glutamate--tRNA ligase, mitochondrial (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)"
ruditapes2_c2842	gene expression	other metabolic processes	P	"Probable glutamate--tRNA ligase, mitochondrial (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)"
ruditapes2_c2842	tRNA aminoacylation for mitochondrial protein translation	protein metabolism	P	"Probable glutamate--tRNA ligase, mitochondrial (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)"
ruditapes2_c2842	tRNA aminoacylation for mitochondrial protein translation	RNA metabolism	P	"Probable glutamate--tRNA ligase, mitochondrial (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)"
ruditapes2_c2842	tRNA aminoacylation for mitochondrial protein translation	cell organization and biogenesis	P	"Probable glutamate--tRNA ligase, mitochondrial (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)"
ruditapes_c12090	transport	transport	P	Potassium channel subfamily T member 1 (KCa4.1)
ruditapes_c12090	ion transport	transport	P	Potassium channel subfamily T member 1 (KCa4.1)
ruditapes_c12090	potassium ion transport	transport	P	Potassium channel subfamily T member 1 (KCa4.1)
ruditapes_c23245	ion transport	transport	P	Glycine receptor subunit alpha-4
ruditapes_c23245	chloride transport	transport	P	Glycine receptor subunit alpha-4
ruditapes_c23245	transport	transport	P	Glycine receptor subunit alpha-4
ruditapes_c21907	tRNA processing	RNA metabolism	P	tRNA (guanine(37)-N1)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase) (tRNA methyltransferase 5)
ruditapes_c21907	methylation	other metabolic processes	P	tRNA (guanine(37)-N1)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase) (tRNA methyltransferase 5)
ruditapes_c11496	G-protein coupled receptor protein signaling pathway	signal transduction	P	C-X-C chemokine receptor type 3 (CXC-R3) (CXCR-3) (Interferon-inducible protein 10 receptor) (IP-10 receptor) (CD antigen CD183)
ruditapes_c11496	signal transduction	signal transduction	P	C-X-C chemokine receptor type 3 (CXC-R3) (CXCR-3) (Interferon-inducible protein 10 receptor) (IP-10 receptor) (CD antigen CD183)
ruditapes_c8073	defense response	stress response	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c8073	innate immune response	stress response	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c9341	immune response	other biological processes	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c9341	innate immune response	stress response	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c9341	defense response	stress response	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c8073	"phagocytosis, recognition"	transport	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c8073	"phagocytosis, recognition"	cell organization and biogenesis	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_s38951	protein homooligomerization	cell organization and biogenesis	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c9341	protein homooligomerization	cell organization and biogenesis	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c8073	carbohydrate mediated signaling	signal transduction	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c9341	pattern recognition receptor signaling pathway	signal transduction	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c9341	pattern recognition receptor signaling pathway	stress response	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c9341	carbohydrate mediated signaling	signal transduction	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_s38951	carbohydrate mediated signaling	signal transduction	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c9341	"phagocytosis, recognition"	transport	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c9341	"phagocytosis, recognition"	cell organization and biogenesis	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c8073	pattern recognition receptor signaling pathway	signal transduction	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c8073	pattern recognition receptor signaling pathway	stress response	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c8073	protein homooligomerization	cell organization and biogenesis	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_s38951	"phagocytosis, recognition"	transport	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_s38951	"phagocytosis, recognition"	cell organization and biogenesis	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_s38951	innate immune response	stress response	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_s38951	defense response	stress response	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_s38951	immune response	other biological processes	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c8073	immune response	other biological processes	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_s38951	pattern recognition receptor signaling pathway	signal transduction	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_s38951	pattern recognition receptor signaling pathway	stress response	P	Collectin-12 (Collectin placenta protein 1) (CL-P1) (hCL-P1) (Nurse cell scavenger receptor 2) (Scavenger receptor class A member 4) (Scavenger receptor with C-type lectin)
ruditapes_c19204	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_c19204	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_c19204	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_c19204	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_c19204	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_c19204	cell division	other biological processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_c22263	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes_c22263	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes_c22263	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes_c9999	metabolic process	other metabolic processes	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c9999	cell wall organization	cell organization and biogenesis	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c9999	peptidoglycan biosynthetic process	other metabolic processes	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c9999	regulation of cell shape	cell organization and biogenesis	P	Glutamate racemase (EC 5.1.1.3)
ruditapes_c1888	branched chain family amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c1888	cellular amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c1888	oxidation reduction	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c27232	glucuronate catabolic process	other metabolic processes	P	5-deoxy-glucuronate isomerase (5DG isomerase) (EC 5.3.1.n1)
ruditapes_c27232	metabolic process	other metabolic processes	P	5-deoxy-glucuronate isomerase (5DG isomerase) (EC 5.3.1.n1)
ruditapes_c18122	carbohydrate metabolic process	other metabolic processes	P	Xylose isomerase (EC 5.3.1.5)
ruditapes_c18122	pentose-phosphate shunt	other metabolic processes	P	Xylose isomerase (EC 5.3.1.5)
ruditapes_c18122	D-xylose metabolic process	other metabolic processes	P	Xylose isomerase (EC 5.3.1.5)
ruditapes_c27920	metabolic process	other metabolic processes	P	3'-5' exoribonuclease YhaM (EC 3.1.-.-)
ruditapes_c14935	isoprenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c14935	terpenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c14935	phosphorylation	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c8651	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c8651	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c8651	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c8651	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c8651	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c8651	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c6310	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c6310	oxidation reduction	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes2_c2956	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes2_c2956	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes2_c2956	terpenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
ruditapes_c20207	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c20207	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_s40061	tRNA processing	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_s40061	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_s40061	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_s40061	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c23652	translation	protein metabolism	P	50S ribosomal protein L4
ruditapes_c31260	pectin catabolic process	other metabolic processes	P	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) (5-keto-4-deoxyuronate isomerase) (DKI isomerase)
ruditapes_c31260	metabolic process	other metabolic processes	P	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) (5-keto-4-deoxyuronate isomerase) (DKI isomerase)
ruditapes_c22308	glutamine metabolic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 1 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase I) (FGAM synthase I)
ruditapes_c22308	'de novo' IMP biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 1 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase I) (FGAM synthase I)
ruditapes_c22308	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 1 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase I) (FGAM synthase I)
ruditapes_c10505	pyrroloquinoline quinone biosynthetic process	protein metabolism	P	Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone biosynthesis protein E)
ruditapes_c26748	fatty acid metabolic process	other metabolic processes	P	L-carnitine dehydrogenase (CDH) (L-CDH) (EC 1.1.1.108)
ruditapes_c26748	oxidation reduction	other metabolic processes	P	L-carnitine dehydrogenase (CDH) (L-CDH) (EC 1.1.1.108)
ruditapes_c18536	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c18536	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c23257	methylation	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c23257	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c23257	dTMP biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes2_c2735	small GTPase mediated signal transduction	signal transduction	P	DnaJ homolog subfamily C member 27-B (Rab and DnaJ domain-containing protein 2) (Rab and DnaJ domain-containing protein B)
ruditapes2_c2735	protein folding	protein metabolism	P	DnaJ homolog subfamily C member 27-B (Rab and DnaJ domain-containing protein 2) (Rab and DnaJ domain-containing protein B)
ruditapes_c10228	lipid transport	transport	P	Collagen type IV alpha-3-binding protein (Ceramide transfer protein) (Cert) (Goodpasture antigen-binding protein) (GPBP)
ruditapes_c10228	transport	transport	P	Collagen type IV alpha-3-binding protein (Ceramide transfer protein) (Cert) (Goodpasture antigen-binding protein) (GPBP)
ruditapes_c10228	multicellular organismal development	developmental processes	P	Collagen type IV alpha-3-binding protein (Ceramide transfer protein) (Cert) (Goodpasture antigen-binding protein) (GPBP)
ruditapes_c10228	muscle organ development	developmental processes	P	Collagen type IV alpha-3-binding protein (Ceramide transfer protein) (Cert) (Goodpasture antigen-binding protein) (GPBP)
ruditapes_c10162	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 13 (17-beta-HSD 13) (EC 1.1.-.-) (Short-chain dehydrogenase/reductase 9)
ruditapes_c10162	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 13 (17-beta-HSD 13) (EC 1.1.-.-) (Short-chain dehydrogenase/reductase 9)
ruditapes_c10132	methylation	other metabolic processes	P	Methyltransferase-like protein 2 (EC 2.1.1.-)
ruditapes_c18680	methylation	other metabolic processes	P	Methyltransferase-like protein 2 (EC 2.1.1.-)
ruditapes_c3320	small GTPase mediated signal transduction	signal transduction	P	Rab-like protein 5
ruditapes_c10575	proteolysis	protein metabolism	P	Probable signal peptidase complex subunit 2 (EC 3.4.-.-) (Microsomal signal peptidase 25 kDa subunit) (SPase 25 kDa subunit)
ruditapes_c10575	signal peptide processing	protein metabolism	P	Probable signal peptidase complex subunit 2 (EC 3.4.-.-) (Microsomal signal peptidase 25 kDa subunit) (SPase 25 kDa subunit)
ruditapes_c14985	chaperone mediated protein folding requiring cofactor	protein metabolism	P	Torsin-3A (Torsin family 3 member A)
ruditapes_c30363	protein amino acid phosphorylation	protein metabolism	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1)
ruditapes_c30363	phosphorylation	other metabolic processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1)
ruditapes_c30363	lymph vessel development	developmental processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1)
ruditapes_c30363	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1)
ruditapes_c30363	vascular endothelial growth factor receptor signaling pathway	signal transduction	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1)
ruditapes_c30363	multicellular organismal development	developmental processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1)
ruditapes_c30363	cell differentiation	other biological processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1)
ruditapes_c30363	angiogenesis	developmental processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1)
ruditapes_c28661	innate immune response	stress response	P	Defense protein 3 (DFP-3)
ruditapes_c28661	defense response to bacterium	stress response	P	Defense protein 3 (DFP-3)
ruditapes_c10513	defense response to protozoan	stress response	P	Putative defense protein 1 (DFP-1)
ruditapes_c10513	defense response to bacterium	stress response	P	Putative defense protein 1 (DFP-1)
ruditapes_c10513	innate immune response	stress response	P	Putative defense protein 1 (DFP-1)
ruditapes_c28345	viral envelope fusion with host membrane	cell organization and biogenesis	P	Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
ruditapes_c14659	DNA replication	DNA metabolism	P	DNA replication and repair protein RecF
ruditapes_c14659	response to DNA damage stimulus	stress response	P	DNA replication and repair protein RecF
ruditapes_c14659	SOS response	stress response	P	DNA replication and repair protein RecF
ruditapes_c14659	DNA repair	stress response	P	DNA replication and repair protein RecF
ruditapes_c14659	DNA repair	DNA metabolism	P	DNA replication and repair protein RecF
ruditapes_c25344	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c25344	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c16938	lignin catabolic process	other metabolic processes	P	Laccase-7 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 7) (Diphenol oxidase 7) (Urishiol oxidase 7)
ruditapes_c16938	oxidation reduction	other metabolic processes	P	Laccase-7 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 7) (Diphenol oxidase 7) (Urishiol oxidase 7)
ruditapes_c16938	vegetative to reproductive phase transition	developmental processes	P	Laccase-7 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 7) (Diphenol oxidase 7) (Urishiol oxidase 7)
ruditapes_c16938	response to copper ion	other biological processes	P	Laccase-7 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 7) (Diphenol oxidase 7) (Urishiol oxidase 7)
ruditapes2_c436	response to cold	stress response	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (EC 2.4.99.18) (Ribophorin II) (RPN-II) (Ribophorin-2)
ruditapes_lrc38546	response to cold	stress response	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (EC 2.4.99.18) (Ribophorin II) (RPN-II) (Ribophorin-2)
ruditapes2_c436	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (EC 2.4.99.18) (Ribophorin II) (RPN-II) (Ribophorin-2)
ruditapes_lrc38546	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (EC 2.4.99.18) (Ribophorin II) (RPN-II) (Ribophorin-2)
ruditapes_c26439	RNA processing	RNA metabolism	P	Endoribonuclease Dicer homolog 3a (Dicer-like protein 3a) (OsDCL3a) (EC 3.1.26.-)
ruditapes_c26439	gene silencing by RNA	other metabolic processes	P	Endoribonuclease Dicer homolog 3a (Dicer-like protein 3a) (OsDCL3a) (EC 3.1.26.-)
ruditapes_c7616	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Lysine-specific demethylase 6B (EC 1.14.11.-) (JmjC domain-containing protein 3) (Jumonji domain-containing protein 3)
ruditapes_c7616	chromatin modification	cell organization and biogenesis	P	Lysine-specific demethylase 6B (EC 1.14.11.-) (JmjC domain-containing protein 3) (Jumonji domain-containing protein 3)
ruditapes_c7616	histone demethylation	protein metabolism	P	Lysine-specific demethylase 6B (EC 1.14.11.-) (JmjC domain-containing protein 3) (Jumonji domain-containing protein 3)
ruditapes_c7616	histone demethylation	cell organization and biogenesis	P	Lysine-specific demethylase 6B (EC 1.14.11.-) (JmjC domain-containing protein 3) (Jumonji domain-containing protein 3)
ruditapes_c7616	oxidation reduction	other metabolic processes	P	Lysine-specific demethylase 6B (EC 1.14.11.-) (JmjC domain-containing protein 3) (Jumonji domain-containing protein 3)
ruditapes_c7616	inflammatory response	stress response	P	Lysine-specific demethylase 6B (EC 1.14.11.-) (JmjC domain-containing protein 3) (Jumonji domain-containing protein 3)
ruditapes2_c411	dendrite development	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes2_c411	dendrite development	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c24856	neuron remodeling	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c24856	dendrite development	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes2_c411	cell adhesion	cell adhesion	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c24856	positive regulation of axon regeneration	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c24856	positive regulation of axon regeneration	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c30855	cell adhesion	cell adhesion	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c30855	dendrite development	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c30855	dendrite development	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c30855	positive regulation of axon regeneration	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c30855	positive regulation of axon regeneration	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes2_c411	positive regulation of axon regeneration	stress response	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes2_c411	positive regulation of axon regeneration	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes2_c411	positive regulation of axon regeneration	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c24856	positive regulation of axon regeneration	stress response	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c24856	positive regulation of neuron projection development	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c24856	positive regulation of neuron projection development	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes2_c411	positive regulation of neuron projection development	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes2_c411	positive regulation of neuron projection development	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c24856	cell adhesion	cell adhesion	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c30855	positive regulation of axon regeneration	stress response	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c24856	dendrite development	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes2_c411	neuron remodeling	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c30855	neuron remodeling	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c30855	positive regulation of neuron projection development	developmental processes	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c30855	positive regulation of neuron projection development	cell organization and biogenesis	P	Scavenger receptor class F member 1 (Acetyl LDL receptor) (Scavenger receptor expressed by endothelial cells 1 protein) (SREC-I)
ruditapes_c13989	viral reproductive process	other biological processes	P	Genome-linked protein precursor [Cleaved into: Serine protease (EC 3.4.21.-); VPg]
ruditapes_c13989	proteolysis	protein metabolism	P	Genome-linked protein precursor [Cleaved into: Serine protease (EC 3.4.21.-); VPg]
ruditapes_c23623	tRNA processing	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c23623	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c23623	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c23623	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c6597	response to DNA damage stimulus	stress response	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c6597	base-excision repair	stress response	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c6597	base-excision repair	DNA metabolism	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c6597	DNA repair	stress response	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c6597	DNA repair	DNA metabolism	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c25958	valyl-tRNA aminoacylation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c25958	valyl-tRNA aminoacylation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c25958	tRNA aminoacylation for protein translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c25958	tRNA aminoacylation for protein translation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c25958	translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c7642	queuosine biosynthetic process	RNA metabolism	P	7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
ruditapes_c24201	nitrogen compound metabolic process	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes_c21786	thiamin biosynthetic process	other metabolic processes	P	Phosphomethylpyrimidine synthase (EC 4.1.99.17) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
ruditapes_c12544	cell differentiation	other biological processes	P	Probable E3 ubiquitin-protein ligase makorin-2 (EC 6.3.2.-)
ruditapes_c12544	"transcription, DNA-dependent"	RNA metabolism	P	Probable E3 ubiquitin-protein ligase makorin-2 (EC 6.3.2.-)
ruditapes_c12544	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable E3 ubiquitin-protein ligase makorin-2 (EC 6.3.2.-)
ruditapes_c12544	multicellular organismal development	developmental processes	P	Probable E3 ubiquitin-protein ligase makorin-2 (EC 6.3.2.-)
ruditapes_c12544	nervous system development	developmental processes	P	Probable E3 ubiquitin-protein ligase makorin-2 (EC 6.3.2.-)
ruditapes_c17622	DNA repair	stress response	P	Crossover junction endonuclease EME1 (EC 3.1.22.-)
ruditapes_c17622	DNA repair	DNA metabolism	P	Crossover junction endonuclease EME1 (EC 3.1.22.-)
ruditapes_c17622	response to DNA damage stimulus	stress response	P	Crossover junction endonuclease EME1 (EC 3.1.22.-)
ruditapes_c17622	DNA recombination	DNA metabolism	P	Crossover junction endonuclease EME1 (EC 3.1.22.-)
ruditapes_c17622	DNA metabolic process	DNA metabolism	P	Crossover junction endonuclease EME1 (EC 3.1.22.-)
ruditapes_c9325	metabolic process	other metabolic processes	P	Pyruvate kinase isozyme M1/M2 (EC 2.7.1.40)
ruditapes_c9325	glycolysis	other metabolic processes	P	Pyruvate kinase isozyme M1/M2 (EC 2.7.1.40)
ruditapes_c9325	phosphorylation	other metabolic processes	P	Pyruvate kinase isozyme M1/M2 (EC 2.7.1.40)
ruditapes_lrc35860	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_lrc36048	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_lrc35860	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_lrc36048	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c29207	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2)
ruditapes_c29207	lipid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2)
ruditapes_c21696	gluconeogenesis	other metabolic processes	P	Phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (PEPCK) (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase)
ruditapes_c24067	oxidation reduction	other metabolic processes	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c24067	queuosine biosynthetic process	RNA metabolism	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c23435	cell wall organization	cell organization and biogenesis	P	Monofunctional biosynthetic peptidoglycan transglycosylase (Monofunctional TGase) (EC 2.4.2.-)
ruditapes_c23435	regulation of cell shape	cell organization and biogenesis	P	Monofunctional biosynthetic peptidoglycan transglycosylase (Monofunctional TGase) (EC 2.4.2.-)
ruditapes_c23435	peptidoglycan biosynthetic process	other metabolic processes	P	Monofunctional biosynthetic peptidoglycan transglycosylase (Monofunctional TGase) (EC 2.4.2.-)
ruditapes_c18241	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c18241	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c27619	cellular amino acid biosynthetic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisH (EC 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH)
ruditapes_c27619	histidine biosynthetic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisH (EC 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH)
ruditapes_c27619	glutamine metabolic process	other metabolic processes	P	Imidazole glycerol phosphate synthase subunit HisH (EC 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit HisH) (ImGP synthase subunit HisH) (IGPS subunit HisH)
ruditapes_lrc20396	GTP catabolic process	other metabolic processes	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_lrc20396	tRNA processing	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_lrc20396	tRNA modification	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c7782	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c7782	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c7782	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c7782	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c7782	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c7782	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c27708	proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c27708	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c27708	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c27708	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c27708	ion transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c27708	transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c27976	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c27976	oxidation reduction	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c23950	transport	transport	P	Protein TolB
ruditapes_c23950	protein import	transport	P	Protein TolB
ruditapes_c23950	protein transport	transport	P	Protein TolB
ruditapes_c26391	translation	protein metabolism	P	Eukaryotic translation initiation factor 2D (eIF2d) (Ligatin)
ruditapes_c26391	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 2D (eIF2d) (Ligatin)
ruditapes2_c1617	metabolic process	other metabolic processes	P	"Isochorismatase domain-containing protein 2, mitochondrial"
ruditapes2_c2941	proteolysis	protein metabolism	P	Signal peptide peptidase-like 2B (SPP-like 2B) (SPPL2b) (EC 3.4.23.-)
ruditapes_c8538	cell adhesion	cell adhesion	P	BTB/POZ domain-containing protein 9
ruditapes_c13576	synapse organization	cell organization and biogenesis	P	Disks large homolog 2 (Postsynaptic density protein 93) (PSD-93)
ruditapes_c13576	synaptic transmission	cell-cell signaling	P	Disks large homolog 2 (Postsynaptic density protein 93) (PSD-93)
ruditapes_c13576	negative regulation of phosphatase activity	other metabolic processes	P	Disks large homolog 2 (Postsynaptic density protein 93) (PSD-93)
ruditapes2_c795	biological_process	other biological processes	P	Protein KRTCAP2 homolog
ruditapes_c24263	response to DNA damage stimulus	stress response	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	protection from non-homologous end joining at telomere	stress response	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	protection from non-homologous end joining at telomere	DNA metabolism	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	protection from non-homologous end joining at telomere	cell organization and biogenesis	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	telomere maintenance	DNA metabolism	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	telomere maintenance	cell organization and biogenesis	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	cell cycle checkpoint	cell cycle and proliferation	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	DNA repair	stress response	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	DNA repair	DNA metabolism	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	telomeric loop formation	DNA metabolism	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	telomeric loop formation	cell organization and biogenesis	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	telomeric 3' overhang formation	DNA metabolism	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c24263	telomeric 3' overhang formation	cell organization and biogenesis	P	5' exonuclease Apollo (EC 3.1.-.-) (DNA cross-link repair 1B protein) (SNM1 homolog B)
ruditapes_c2787	seed germination	developmental processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c2787	regulation of transmembrane ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc38329	regulation of stomatal movement	other biological processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c2787	transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c145	ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c2787	calcium-mediated signaling	signal transduction	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc38329	seed germination	developmental processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc38329	regulation of jasmonic acid biosynthetic process	other metabolic processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes2_c4174	calcium ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc38329	defense response	stress response	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes2_c4174	transmembrane transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes2_c4174	seed germination	developmental processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c2787	transmembrane calcium ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc38329	transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c145	transmembrane calcium ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes2_c4174	calcium-mediated signaling	signal transduction	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c145	regulation of stomatal movement	other biological processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c145	calcium-mediated signaling	signal transduction	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes2_c4174	transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c145	transmembrane transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes2_c4174	regulation of stomatal movement	other biological processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c2787	ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes2_c4174	regulation of jasmonic acid biosynthetic process	other metabolic processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c2787	transmembrane transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c145	calcium ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc38329	ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc38329	regulation of transmembrane ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c2787	defense response	stress response	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c145	transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes2_c4174	ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes2_c4174	regulation of transmembrane ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c145	defense response	stress response	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc38329	calcium-mediated signaling	signal transduction	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc38329	transmembrane calcium ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c145	seed germination	developmental processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c145	regulation of jasmonic acid biosynthetic process	other metabolic processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes2_c4174	defense response	stress response	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c2787	calcium ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes2_c4174	transmembrane calcium ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c145	regulation of transmembrane ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc38329	calcium ion transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc38329	transmembrane transport	transport	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c2787	regulation of jasmonic acid biosynthetic process	other metabolic processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_c2787	regulation of stomatal movement	other biological processes	P	Two pore calcium channel protein 1 (OsTPC1) (Voltage-dependent calcium channel protein TPC1)
ruditapes_lrc25962	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c14240	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c31935	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_s37207	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_lrc37209	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_s38266	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_c4566	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_lrc28234	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_c4566	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_s38266	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_s37207	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_lrc28234	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_lrc37209	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_c23221	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_s38266	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_lrc37209	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_lrc28234	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_s37207	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_lrc28234	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_c23221	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_s38266	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_c4566	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_c4566	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_s37207	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_c23221	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_lrc37209	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_c23221	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_lrc22787	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase (EC 2.4.2.26) (Peptide O-xylosyltransferase)
ruditapes_c20061	metabolic process	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c20061	oxidation reduction	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c20061	pyridoxine biosynthetic process	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c22669	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 1 (FBPase class 1) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1)"
ruditapes_c13395	methylation	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c13395	dTMP biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c13395	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c27348	regulation of cell shape	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c27348	peptidoglycan biosynthetic process	other metabolic processes	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c27348	cell wall organization	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c9677	multicellular organism growth	other biological processes	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes_c9677	regulation of cell proliferation	cell cycle and proliferation	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes_c9677	exocrine pancreas development	developmental processes	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes_c9677	proteolysis	protein metabolism	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes_c9677	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes_c9677	regulation of cell differentiation	other biological processes	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes_c9677	post-embryonic development	developmental processes	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes_c9677	Wnt receptor signaling pathway	signal transduction	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes_c9677	digestive system development	developmental processes	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes_c9677	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes_c9677	inflammatory response	stress response	P	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)
ruditapes_c15825	proteolysis	protein metabolism	P	Complement C1r subcomponent (EC 3.4.21.41) (Complement component 1 subcomponent r) [Cleaved into: Complement C1r subcomponent heavy chain; Complement C1r subcomponent light chain]
ruditapes_c15825	complement activation	stress response	P	Complement C1r subcomponent (EC 3.4.21.41) (Complement component 1 subcomponent r) [Cleaved into: Complement C1r subcomponent heavy chain; Complement C1r subcomponent light chain]
ruditapes_c15825	complement activation	protein metabolism	P	Complement C1r subcomponent (EC 3.4.21.41) (Complement component 1 subcomponent r) [Cleaved into: Complement C1r subcomponent heavy chain; Complement C1r subcomponent light chain]
ruditapes_c15825	"complement activation, classical pathway"	stress response	P	Complement C1r subcomponent (EC 3.4.21.41) (Complement component 1 subcomponent r) [Cleaved into: Complement C1r subcomponent heavy chain; Complement C1r subcomponent light chain]
ruditapes_c15825	"complement activation, classical pathway"	protein metabolism	P	Complement C1r subcomponent (EC 3.4.21.41) (Complement component 1 subcomponent r) [Cleaved into: Complement C1r subcomponent heavy chain; Complement C1r subcomponent light chain]
ruditapes_c15825	innate immune response	stress response	P	Complement C1r subcomponent (EC 3.4.21.41) (Complement component 1 subcomponent r) [Cleaved into: Complement C1r subcomponent heavy chain; Complement C1r subcomponent light chain]
ruditapes_c11316	mRNA processing	RNA metabolism	P	"Serine/arginine-rich splicing factor 2 (Splicing component, 35 kDa) (Splicing factor SC35) (SC-35) (Splicing factor, arginine/serine-rich 2)"
ruditapes_c11316	RNA splicing	RNA metabolism	P	"Serine/arginine-rich splicing factor 2 (Splicing component, 35 kDa) (Splicing factor SC35) (SC-35) (Splicing factor, arginine/serine-rich 2)"
ruditapes_lrc38077	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_s37363	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes2_lrc4492	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_lrc10233	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes2_c1312	cell redox homeostasis	other biological processes	P	"Dihydrolipoyl dehydrogenase, mitochondrial (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase)"
ruditapes2_c1312	oxidation reduction	other metabolic processes	P	"Dihydrolipoyl dehydrogenase, mitochondrial (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase)"
ruditapes_lrc19565	cell cycle	cell cycle and proliferation	P	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B (Eukaryotic peptide chain release factor subunit 3b) (eRF3b) (G1 to S phase transition protein 2 homolog)
ruditapes_lrc19565	translation	protein metabolism	P	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B (Eukaryotic peptide chain release factor subunit 3b) (eRF3b) (G1 to S phase transition protein 2 homolog)
ruditapes_lrc19565	GTP catabolic process	other metabolic processes	P	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B (Eukaryotic peptide chain release factor subunit 3b) (eRF3b) (G1 to S phase transition protein 2 homolog)
ruditapes_lrc19565	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B (Eukaryotic peptide chain release factor subunit 3b) (eRF3b) (G1 to S phase transition protein 2 homolog)
ruditapes2_c404	"regulation of alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Probable ATP-dependent RNA helicase DDX5 (EC 3.6.4.13) (DEAD box protein 5)
ruditapes2_c404	RNA splicing	RNA metabolism	P	Probable ATP-dependent RNA helicase DDX5 (EC 3.6.4.13) (DEAD box protein 5)
ruditapes2_c404	mRNA processing	RNA metabolism	P	Probable ATP-dependent RNA helicase DDX5 (EC 3.6.4.13) (DEAD box protein 5)
ruditapes_c25870	transport	transport	P	Synaptotagmin-1 (Synaptotagmin I) (SytI)
ruditapes_c13402	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18)
ruditapes_c13402	protein amino acid glycosylation	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18)
ruditapes_c1837	transcription from RNA polymerase II promoter	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA polymerases I, II, and III subunit ABC1) (DNA-directed RNA polymerase II subunit E) (RPB5 homolog)"
ruditapes_c1837	"transcription, DNA-dependent"	RNA metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA polymerases I, II, and III subunit ABC1) (DNA-directed RNA polymerase II subunit E) (RPB5 homolog)"
ruditapes_c1837	protein amino acid phosphorylation	protein metabolism	P	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA polymerases I, II, and III subunit ABC1) (DNA-directed RNA polymerase II subunit E) (RPB5 homolog)"
ruditapes_lrc34007	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34521	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34188	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34521	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6034	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34334	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc6034	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34188	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34334	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_lrc34007	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_c30122	signal transduction	signal transduction	P	Arrestin domain-containing protein 3
ruditapes_c25476	carbohydrate metabolic process	other metabolic processes	P	Beta-glucuronidase (EC 3.2.1.31)
ruditapes_c25476	metabolic process	other metabolic processes	P	Beta-glucuronidase (EC 3.2.1.31)
ruditapes_c37920	signal transduction	signal transduction	P	Relaxin receptor 1 (Relaxin family peptide receptor 1)
ruditapes_c37920	G-protein coupled receptor protein signaling pathway	signal transduction	P	Relaxin receptor 1 (Relaxin family peptide receptor 1)
ruditapes_c29870	homophilic cell adhesion	cell adhesion	P	Cadherin-13
ruditapes_c29870	cell adhesion	cell adhesion	P	Cadherin-13
ruditapes_c11990	RNA splicing	RNA metabolism	P	U6 snRNA-associated Sm-like protein LSm5
ruditapes_c11990	mRNA processing	RNA metabolism	P	U6 snRNA-associated Sm-like protein LSm5
ruditapes_c13774	signal transduction	signal transduction	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain)
ruditapes_c13774	apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain)
ruditapes_c13774	induction of apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain)
ruditapes_c13774	regulation of apoptosis	death	P	Death domain-containing protein CRADD (Caspase and RIP adapter with death domain)
ruditapes_c20429	protein transport	transport	P	Protein YIPF5 (YIP1 family member 5)
ruditapes_c20429	vesicle-mediated transport	transport	P	Protein YIPF5 (YIP1 family member 5)
ruditapes_c20429	transport	transport	P	Protein YIPF5 (YIP1 family member 5)
ruditapes_c20332	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromobox protein homolog 3 (Heterochromatin protein 1 homolog gamma) (HP1 gamma)
ruditapes_c20332	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromobox protein homolog 3 (Heterochromatin protein 1 homolog gamma) (HP1 gamma)
ruditapes_c20332	chromatin modification	cell organization and biogenesis	P	Chromobox protein homolog 3 (Heterochromatin protein 1 homolog gamma) (HP1 gamma)
ruditapes_c20332	"transcription, DNA-dependent"	RNA metabolism	P	Chromobox protein homolog 3 (Heterochromatin protein 1 homolog gamma) (HP1 gamma)
ruditapes2_c2821	cell differentiation	other biological processes	P	Regulator of microtubule dynamics protein 3 (RMD-3) (Protein FAM82A2) (Protein FAM82C)
ruditapes2_c2821	apoptosis	death	P	Regulator of microtubule dynamics protein 3 (RMD-3) (Protein FAM82A2) (Protein FAM82C)
ruditapes_c18447	DNA repair	stress response	P	Protein artemis (EC 3.1.-.-) (DNA cross-link repair 1C protein)
ruditapes_c18447	DNA repair	DNA metabolism	P	Protein artemis (EC 3.1.-.-) (DNA cross-link repair 1C protein)
ruditapes_c18447	DNA recombination	DNA metabolism	P	Protein artemis (EC 3.1.-.-) (DNA cross-link repair 1C protein)
ruditapes_c18447	response to DNA damage stimulus	stress response	P	Protein artemis (EC 3.1.-.-) (DNA cross-link repair 1C protein)
ruditapes_c29413	"regulation of transcription, DNA-dependent"	RNA metabolism	P	C-Myc-binding protein (Associate of Myc 1) (AMY-1)
ruditapes_c29413	spermatogenesis	other biological processes	P	C-Myc-binding protein (Associate of Myc 1) (AMY-1)
ruditapes_c29413	"transcription, DNA-dependent"	RNA metabolism	P	C-Myc-binding protein (Associate of Myc 1) (AMY-1)
ruditapes2_c282	translation	protein metabolism	P	"39S ribosomal protein L16, mitochondrial (L16mt) (MRP-L16)"
ruditapes_c13945	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 9B
ruditapes_c13945	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription initiation factor TFIID subunit 9B
ruditapes_c13945	negative regulation of apoptosis	death	P	Transcription initiation factor TFIID subunit 9B
ruditapes_c13945	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 9B
ruditapes_c13945	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 9B
ruditapes_c13945	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 9B
ruditapes_c13945	positive regulation of cell growth	other biological processes	P	Transcription initiation factor TFIID subunit 9B
ruditapes2_c6554	transport	transport	P	"Phosphate carrier protein, mitochondrial (Phosphate transport protein) (PTP) (Solute carrier family 25 member 3)"
ruditapes_c29126	negative regulation of cellular metabolic process	other metabolic processes	P	Butyrophilin subfamily 2 member A2
ruditapes_c29126	negative regulation of activated T cell proliferation	cell cycle and proliferation	P	Butyrophilin subfamily 2 member A2
ruditapes_c29126	negative regulation of cytokine secretion	transport	P	Butyrophilin subfamily 2 member A2
ruditapes_c19886	neuropeptide signaling pathway	signal transduction	P	Brain-specific angiogenesis inhibitor 2
ruditapes_c19886	negative regulation of angiogenesis	developmental processes	P	Brain-specific angiogenesis inhibitor 2
ruditapes_c19886	signal transduction	signal transduction	P	Brain-specific angiogenesis inhibitor 2
ruditapes_c19886	G-protein coupled receptor protein signaling pathway	signal transduction	P	Brain-specific angiogenesis inhibitor 2
ruditapes_c19886	cell surface receptor linked signal transduction	signal transduction	P	Brain-specific angiogenesis inhibitor 2
ruditapes_lrc28965	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_c20083	cell adhesion	cell adhesion	P	Myelin protein zero-like protein 2 (Epithelial V-like antigen 1)
ruditapes_c5971	cellular response to heat	stress response	P	ATP-dependent RNA helicase A (RHA) (EC 3.6.4.13) (DEAH box protein 9) (Nuclear DNA helicase II) (NDH II)
ruditapes_c15090	cellular response to heat	stress response	P	ATP-dependent RNA helicase A (RHA) (EC 3.6.4.13) (DEAH box protein 9) (Nuclear DNA helicase II) (NDH II)
ruditapes_c18867	cellular response to heat	stress response	P	ATP-dependent RNA helicase A (RHA) (EC 3.6.4.13) (DEAH box protein 9) (Nuclear DNA helicase II) (NDH II)
ruditapes_c7417	antigen processing and presentation of endogenous peptide antigen via MHC class I	other biological processes	P	Tapasin-related protein (TAPASIN-R) (TAP-binding protein-like) (TAP-binding protein-related protein) (TAPBP-R) (Tapasin-like)
ruditapes_lrc36746	iron ion transport	transport	P	Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1)
ruditapes_lrc36746	oxidation reduction	other metabolic processes	P	Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1)
ruditapes_lrc36746	cellular iron ion homeostasis	other biological processes	P	Ferritin heavy chain (Ferritin H subunit) (EC 1.16.3.1)
ruditapes_c26615	transport	transport	P	UDP-xylose and UDP-N-acetylglucosamine transporter (Solute carrier family 35 member B4)
ruditapes_c26615	transmembrane transport	transport	P	UDP-xylose and UDP-N-acetylglucosamine transporter (Solute carrier family 35 member B4)
ruditapes_c26615	carbohydrate transport	transport	P	UDP-xylose and UDP-N-acetylglucosamine transporter (Solute carrier family 35 member B4)
ruditapes2_c2530	RNA splicing	RNA metabolism	P	Luc7-like protein 3 (Cisplatin resistance-associated-overexpressed protein)
ruditapes2_c2530	apoptosis	death	P	Luc7-like protein 3 (Cisplatin resistance-associated-overexpressed protein)
ruditapes2_c2530	response to stress	stress response	P	Luc7-like protein 3 (Cisplatin resistance-associated-overexpressed protein)
ruditapes2_c2530	mRNA processing	RNA metabolism	P	Luc7-like protein 3 (Cisplatin resistance-associated-overexpressed protein)
ruditapes_c26480	proteolysis	protein metabolism	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c26480	fibrinolysis	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c26480	tissue remodeling	other biological processes	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c26480	blood coagulation	stress response	P	"Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B]"
ruditapes_c4645	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PAK 6 (EC 2.7.11.1) (p21-activated kinase 6) (PAK-6)
ruditapes_c4645	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PAK 6 (EC 2.7.11.1) (p21-activated kinase 6) (PAK-6)
ruditapes_s36622	translation	protein metabolism	P	40S ribosomal protein S20
ruditapes_c22213	rRNA processing	RNA metabolism	P	U3 small nucleolar ribonucleoprotein protein IMP4 (U3 snoRNP protein IMP4)
ruditapes_c22213	ribosome biogenesis	other biological processes	P	U3 small nucleolar ribonucleoprotein protein IMP4 (U3 snoRNP protein IMP4)
ruditapes_c12914	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 14
ruditapes_c12914	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 14
ruditapes_c1249	protein transport	transport	P	Exportin-2 (Exp2) (Chromosome segregation 1-like protein) (Importin-alpha re-exporter)
ruditapes_c1249	transport	transport	P	Exportin-2 (Exp2) (Chromosome segregation 1-like protein) (Importin-alpha re-exporter)
ruditapes_c1249	intracellular protein transport	transport	P	Exportin-2 (Exp2) (Chromosome segregation 1-like protein) (Importin-alpha re-exporter)
ruditapes_lrc36052	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_c6663	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_s36595	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_c20013	wound healing	stress response	P	Bombesin receptor-activated protein C6orf89 homolog
ruditapes_c20013	epithelial cell proliferation	cell cycle and proliferation	P	Bombesin receptor-activated protein C6orf89 homolog
ruditapes2_c321	positive regulation of cell cycle	cell cycle and proliferation	P	Bombesin receptor-activated protein C6orf89 homolog
ruditapes2_c321	wound healing	stress response	P	Bombesin receptor-activated protein C6orf89 homolog
ruditapes2_c321	epithelial cell proliferation	cell cycle and proliferation	P	Bombesin receptor-activated protein C6orf89 homolog
ruditapes_c20013	positive regulation of cell cycle	cell cycle and proliferation	P	Bombesin receptor-activated protein C6orf89 homolog
ruditapes_c8301	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 13 (Transcription initiation factor TFIID 18 kDa subunit) (TAF(II)18) (TAFII-18) (TAFII18)
ruditapes_c8301	transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription initiation factor TFIID subunit 13 (Transcription initiation factor TFIID 18 kDa subunit) (TAF(II)18) (TAFII-18) (TAFII18)
ruditapes_c8301	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 13 (Transcription initiation factor TFIID 18 kDa subunit) (TAF(II)18) (TAFII-18) (TAFII18)
ruditapes2_lrc4680	translation	protein metabolism	P	60S ribosomal protein L13a
ruditapes2_c459	translational initiation	protein metabolism	P	"Eukaryotic translation initiation factor 1A, X-chromosomal (eIF-1A X isoform) (Eukaryotic translation initiation factor 4C) (eIF-4C)"
ruditapes_c2098	translational initiation	protein metabolism	P	"Eukaryotic translation initiation factor 1A, X-chromosomal (eIF-1A X isoform) (Eukaryotic translation initiation factor 4C) (eIF-4C)"
ruditapes_c4058	translational initiation	protein metabolism	P	"Eukaryotic translation initiation factor 1A, X-chromosomal (eIF-1A X isoform) (Eukaryotic translation initiation factor 4C) (eIF-4C)"
ruditapes_c4058	translation	protein metabolism	P	"Eukaryotic translation initiation factor 1A, X-chromosomal (eIF-1A X isoform) (Eukaryotic translation initiation factor 4C) (eIF-4C)"
ruditapes_c2098	translation	protein metabolism	P	"Eukaryotic translation initiation factor 1A, X-chromosomal (eIF-1A X isoform) (Eukaryotic translation initiation factor 4C) (eIF-4C)"
ruditapes2_c459	translation	protein metabolism	P	"Eukaryotic translation initiation factor 1A, X-chromosomal (eIF-1A X isoform) (Eukaryotic translation initiation factor 4C) (eIF-4C)"
ruditapes_c24165	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase-associated protein RTF1 homolog (Fragment)
ruditapes_c24165	transcription initiation	RNA metabolism	P	RNA polymerase-associated protein RTF1 homolog (Fragment)
ruditapes_c24165	transcription initiation	cell organization and biogenesis	P	RNA polymerase-associated protein RTF1 homolog (Fragment)
ruditapes_c24165	histone modification	protein metabolism	P	RNA polymerase-associated protein RTF1 homolog (Fragment)
ruditapes_c24165	histone modification	cell organization and biogenesis	P	RNA polymerase-associated protein RTF1 homolog (Fragment)
ruditapes_c24165	"transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase-associated protein RTF1 homolog (Fragment)
ruditapes_c9495	transport	transport	P	Large neutral amino acids transporter small subunit 2 (L-type amino acid transporter 2) (Solute carrier family 7 member 8)
ruditapes_c9495	amino acid transport	transport	P	Large neutral amino acids transporter small subunit 2 (L-type amino acid transporter 2) (Solute carrier family 7 member 8)
ruditapes_lrc34946	oxidation reduction	other metabolic processes	P	"Prolyl 4-hydroxylase subunit alpha-1 (4-PH alpha-1) (EC 1.14.11.2) (Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-1)"
ruditapes_c3461	translation	protein metabolism	P	O-phosphoseryl-tRNA(Sec) selenium transferase (EC 2.9.1.2) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase) (Sep-tRNA:Sec-tRNA synthase) (SepSecS) (UGA suppressor tRNA-associated protein)
ruditapes_c3461	oxidation reduction	other metabolic processes	P	O-phosphoseryl-tRNA(Sec) selenium transferase (EC 2.9.1.2) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase) (Sep-tRNA:Sec-tRNA synthase) (SepSecS) (UGA suppressor tRNA-associated protein)
ruditapes_lrc31415	translation	protein metabolism	P	40S ribosomal protein S24
ruditapes2_c2283	endocytosis	transport	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Phosphoinositide 3-kinase-C2-alpha)
ruditapes2_c2283	endocytosis	cell organization and biogenesis	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Phosphoinositide 3-kinase-C2-alpha)
ruditapes2_c2283	cell communication	other biological processes	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Phosphoinositide 3-kinase-C2-alpha)
ruditapes2_c2283	phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Phosphoinositide 3-kinase-C2-alpha)
ruditapes2_c2283	phosphoinositide-mediated signaling	signal transduction	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Phosphoinositide 3-kinase-C2-alpha)
ruditapes2_c2283	exocytosis	transport	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Phosphoinositide 3-kinase-C2-alpha)
ruditapes2_c2283	phosphoinositide phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Phosphoinositide 3-kinase-C2-alpha)
ruditapes_lrc16498	translation	protein metabolism	P	60S ribosomal protein L36
ruditapes2_c1434	proteolysis	protein metabolism	P	Dipeptidyl peptidase 1 (EC 3.4.14.1) (Cathepsin C) (Cathepsin J) (Dipeptidyl peptidase I) (DPP-I) (DPPI) (Dipeptidyl transferase) [Cleaved into: Dipeptidyl peptidase 1 exclusion domain chain (Dipeptidyl peptidase I exclusion domain chain); Dipeptidyl peptidase 1 heavy chain (Dipeptidyl peptidase I heavy chain); Dipeptidyl peptidase 1 light chain (Dipeptidyl peptidase I light chain)]
ruditapes_c27808	proteolysis	protein metabolism	P	Dipeptidyl peptidase 1 (EC 3.4.14.1) (Cathepsin C) (Cathepsin J) (Dipeptidyl peptidase I) (DPP-I) (DPPI) (Dipeptidyl transferase) [Cleaved into: Dipeptidyl peptidase 1 exclusion domain chain (Dipeptidyl peptidase I exclusion domain chain); Dipeptidyl peptidase 1 heavy chain (Dipeptidyl peptidase I heavy chain); Dipeptidyl peptidase 1 light chain (Dipeptidyl peptidase I light chain)]
ruditapes_c7740	proteolysis	protein metabolism	P	Dipeptidyl peptidase 1 (EC 3.4.14.1) (Cathepsin C) (Cathepsin J) (Dipeptidyl peptidase I) (DPP-I) (DPPI) (Dipeptidyl transferase) [Cleaved into: Dipeptidyl peptidase 1 exclusion domain chain (Dipeptidyl peptidase I exclusion domain chain); Dipeptidyl peptidase 1 heavy chain (Dipeptidyl peptidase I heavy chain); Dipeptidyl peptidase 1 light chain (Dipeptidyl peptidase I light chain)]
ruditapes2_c4764	ER-associated protein catabolic process	protein metabolism	P	Protein transport protein Sec61 subunit beta
ruditapes2_c3690	protein transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_s39502	"protein import into nucleus, translocation"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc38799	"retrograde protein transport, ER to cytosol"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc35305	ER-associated protein catabolic process	protein metabolism	P	Protein transport protein Sec61 subunit beta
ruditapes2_c4871	transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc38543	transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes2_c4764	"protein import into nucleus, translocation"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes2_c4871	protein transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_c1026	transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_s39502	transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc38543	protein transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc38799	"protein import into nucleus, translocation"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_s39502	protein transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_c5901	protein transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_c1026	"protein import into nucleus, translocation"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_c5901	ER-associated protein catabolic process	protein metabolism	P	Protein transport protein Sec61 subunit beta
ruditapes2_c4871	ER-associated protein catabolic process	protein metabolism	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc35305	transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_c1026	protein transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc35305	"protein import into nucleus, translocation"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_c5901	"retrograde protein transport, ER to cytosol"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes2_c3690	ER-associated protein catabolic process	protein metabolism	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc38543	ER-associated protein catabolic process	protein metabolism	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc38799	transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc38543	"retrograde protein transport, ER to cytosol"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes2_c3690	"retrograde protein transport, ER to cytosol"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes2_c4764	transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_s39502	"retrograde protein transport, ER to cytosol"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes2_c3690	transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc38799	ER-associated protein catabolic process	protein metabolism	P	Protein transport protein Sec61 subunit beta
ruditapes2_c4764	"retrograde protein transport, ER to cytosol"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_s39502	ER-associated protein catabolic process	protein metabolism	P	Protein transport protein Sec61 subunit beta
ruditapes2_c4871	"protein import into nucleus, translocation"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_c1026	ER-associated protein catabolic process	protein metabolism	P	Protein transport protein Sec61 subunit beta
ruditapes_c5901	"protein import into nucleus, translocation"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes2_c4764	protein transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_c1026	"retrograde protein transport, ER to cytosol"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_c5901	transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes2_c4871	"retrograde protein transport, ER to cytosol"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc35305	"retrograde protein transport, ER to cytosol"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes2_c3690	"protein import into nucleus, translocation"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc38543	"protein import into nucleus, translocation"	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc35305	protein transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_lrc38799	protein transport	transport	P	Protein transport protein Sec61 subunit beta
ruditapes_c30466	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 620
ruditapes_c30466	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 620
ruditapes_c29823	transport	transport	P	Ras-related protein Rab-5B
ruditapes_c29823	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-5B
ruditapes_c29823	endosome organization	cell organization and biogenesis	P	Ras-related protein Rab-5B
ruditapes_c29823	regulation of endocytosis	transport	P	Ras-related protein Rab-5B
ruditapes_c29823	regulation of endocytosis	cell organization and biogenesis	P	Ras-related protein Rab-5B
ruditapes_c29823	protein transport	transport	P	Ras-related protein Rab-5B
ruditapes2_c2264	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional adapter 2-beta
ruditapes2_c2264	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional adapter 2-beta
ruditapes2_c2259	cell differentiation	other biological processes	P	Nephronectin
ruditapes2_c2259	cell adhesion	cell adhesion	P	Nephronectin
ruditapes2_c2259	multicellular organismal development	developmental processes	P	Nephronectin
ruditapes_c25572	oxidation reduction	other metabolic processes	P	Cysteine dioxygenase type 1 (EC 1.13.11.20) (Cysteine dioxygenase type I) (CDO) (CDO-I)
ruditapes_c25572	L-cysteine metabolic process	other metabolic processes	P	Cysteine dioxygenase type 1 (EC 1.13.11.20) (Cysteine dioxygenase type I) (CDO) (CDO-I)
ruditapes_c30045	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c30045	proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c30045	ion transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c30045	transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c30045	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_c30045	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)"
ruditapes_lrc36186	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s37885	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35020	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36139	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35020	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35481	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35481	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6056	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6056	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36186	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34028	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39281	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39281	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s37885	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36139	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36287	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36566	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39266	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34759	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4718	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39078	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6305	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39085	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39384	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34028	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6056	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36139	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc37811	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35797	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4900	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4718	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32307	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32307	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4900	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32307	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36287	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4718	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32307	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34759	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s37885	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36249	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35797	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39266	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35733	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36249	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6211	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6211	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5758	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34760	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6305	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36186	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32695	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39281	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35481	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc37811	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc37811	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39085	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36566	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36566	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6211	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39078	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39078	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35020	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5758	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35481	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36287	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5758	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35020	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5348	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35797	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35797	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39281	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6661	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35481	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39969	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39969	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6211	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4718	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4718	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35797	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35733	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35733	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34759	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35733	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39281	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32695	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36566	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36249	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32695	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32695	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34760	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34759	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6305	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34759	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34759	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6661	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34028	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5348	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6056	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35020	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39969	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39969	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36186	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36139	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36139	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s37885	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39266	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4900	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39384	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36249	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39266	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36139	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc37811	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc37811	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6305	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6305	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36287	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6661	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6661	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6305	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35020	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39969	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4900	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36566	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32307	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6305	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36287	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39281	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36249	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39266	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36566	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35020	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6056	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39384	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32307	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4900	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36139	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34760	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5758	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34028	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35797	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6056	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39969	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39078	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35481	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6661	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32695	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39266	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39266	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35733	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39384	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34028	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6211	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc37811	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc37811	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35797	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39078	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36287	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36287	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35733	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s37885	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s37885	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4900	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4900	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6661	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39078	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32695	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39078	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5758	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5758	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39085	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6056	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34759	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6661	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32695	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5758	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36186	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36186	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6211	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s36566	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39384	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39384	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39384	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc39281	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5348	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s35733	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34760	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5348	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc6211	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4718	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5348	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34760	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39085	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5348	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5348	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39085	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39085	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39085	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34760	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34760	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34028	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc34028	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36249	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36249	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36186	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35481	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s39969	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc4718	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc32307	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_s37885	ATP catabolic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_c7002	response to drug	other biological processes	P	Signal recognition particle 14 kDa protein (SRP14)
ruditapes_c7002	negative regulation of translational elongation	protein metabolism	P	Signal recognition particle 14 kDa protein (SRP14)
ruditapes_c7002	SRP-dependent cotranslational protein targeting to membrane	transport	P	Signal recognition particle 14 kDa protein (SRP14)
ruditapes_c7002	protein targeting to ER	transport	P	Signal recognition particle 14 kDa protein (SRP14)
ruditapes2_lrc4100	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes2_lrc4902	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc32467	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes2_lrc4902	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes_lrc32467	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes2_lrc4100	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes_c4911	apoptosis	death	P	ER membrane protein complex subunit 4 (Transmembrane protein 85)
ruditapes_c31708	apoptosis	death	P	ER membrane protein complex subunit 4 (Transmembrane protein 85)
ruditapes_c25287	RNA splicing	RNA metabolism	P	RNA-binding protein 39 (RNA-binding motif protein 39)
ruditapes_c25287	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RNA-binding protein 39 (RNA-binding motif protein 39)
ruditapes_c25287	"transcription, DNA-dependent"	RNA metabolism	P	RNA-binding protein 39 (RNA-binding motif protein 39)
ruditapes_c25287	mRNA processing	RNA metabolism	P	RNA-binding protein 39 (RNA-binding motif protein 39)
ruditapes_c28170	macroautophagy	stress response	P	Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1 protein)
ruditapes_c28170	macroautophagy	other metabolic processes	P	Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1 protein)
ruditapes_c28170	protein oligomerization	cell organization and biogenesis	P	Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1 protein)
ruditapes_c14810	macroautophagy	stress response	P	Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1 protein)
ruditapes_c14810	macroautophagy	other metabolic processes	P	Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1 protein)
ruditapes_c14810	protein oligomerization	cell organization and biogenesis	P	Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1 protein)
ruditapes_c28309	cell cycle arrest	cell cycle and proliferation	P	Sestrin-2
ruditapes_c15295	tricarboxylic acid cycle	other metabolic processes	P	"2-oxoglutarate dehydrogenase, mitochondrial (EC 1.2.4.2) (2-oxoglutarate dehydrogenase complex component E1) (OGDC-E1) (Alpha-ketoglutarate dehydrogenase)"
ruditapes_c15295	generation of precursor metabolites and energy	other metabolic processes	P	"2-oxoglutarate dehydrogenase, mitochondrial (EC 1.2.4.2) (2-oxoglutarate dehydrogenase complex component E1) (OGDC-E1) (Alpha-ketoglutarate dehydrogenase)"
ruditapes_c15295	metabolic process	other metabolic processes	P	"2-oxoglutarate dehydrogenase, mitochondrial (EC 1.2.4.2) (2-oxoglutarate dehydrogenase complex component E1) (OGDC-E1) (Alpha-ketoglutarate dehydrogenase)"
ruditapes_c15295	oxidation reduction	other metabolic processes	P	"2-oxoglutarate dehydrogenase, mitochondrial (EC 1.2.4.2) (2-oxoglutarate dehydrogenase complex component E1) (OGDC-E1) (Alpha-ketoglutarate dehydrogenase)"
ruditapes_c15295	glycolysis	other metabolic processes	P	"2-oxoglutarate dehydrogenase, mitochondrial (EC 1.2.4.2) (2-oxoglutarate dehydrogenase complex component E1) (OGDC-E1) (Alpha-ketoglutarate dehydrogenase)"
ruditapes_c11235	protein transport	transport	P	Rab GDP dissociation inhibitor beta (Rab GDI beta) (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
ruditapes_c11235	positive regulation of GTPase activity	other biological processes	P	Rab GDP dissociation inhibitor beta (Rab GDI beta) (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
ruditapes2_c2122	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A (Oligosaccharyl transferase subunit STT3A) (STT3-A) (EC 2.4.99.18)
ruditapes2_c2122	protein amino acid glycosylation	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A (Oligosaccharyl transferase subunit STT3A) (STT3-A) (EC 2.4.99.18)
ruditapes_lrc14605	ubiquitin-dependent protein catabolic process	protein metabolism	P	Cullin-7 (CUL-7)
ruditapes_c17070	autophagy	other metabolic processes	P	Autophagy-related protein 9A (APG9-like 1)
ruditapes_c17070	transport	transport	P	Autophagy-related protein 9A (APG9-like 1)
ruditapes_c17070	protein transport	transport	P	Autophagy-related protein 9A (APG9-like 1)
ruditapes_c24031	cell growth	other biological processes	P	Epithelial membrane protein 1 (EMP-1)
ruditapes2_c1804	cell growth	other biological processes	P	Epithelial membrane protein 1 (EMP-1)
ruditapes_c17991	regulation of Rab GTPase activity	signal transduction	P	WD repeat-containing protein 67
ruditapes_c14300	positive regulation of Rab GTPase activity	signal transduction	P	WD repeat-containing protein 67
ruditapes_c17991	positive regulation of Rab GTPase activity	signal transduction	P	WD repeat-containing protein 67
ruditapes_lrc25849	positive regulation of Rab GTPase activity	signal transduction	P	WD repeat-containing protein 67
ruditapes_c14300	regulation of Rab GTPase activity	signal transduction	P	WD repeat-containing protein 67
ruditapes_lrc25849	regulation of Rab GTPase activity	signal transduction	P	WD repeat-containing protein 67
ruditapes_c9172	signal transduction	signal transduction	P	Contactin-associated protein-like 2
ruditapes_c9172	cell adhesion	cell adhesion	P	Contactin-associated protein-like 2
ruditapes_lrc34259	signal transduction	signal transduction	P	"Testican-3 (SPARC/osteonectin, CWCV, and Kazal-like domains proteoglycan 3)"
ruditapes_lrc34259	negative regulation of catalytic activity	other biological processes	P	"Testican-3 (SPARC/osteonectin, CWCV, and Kazal-like domains proteoglycan 3)"
ruditapes_c9573	cell adhesion	cell adhesion	P	Galectin-3-binding protein (Lectin galactoside-binding soluble 3-binding protein)
ruditapes_c341	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase complex subunit SAP18 (18 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p18)
ruditapes_c341	"transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase complex subunit SAP18 (18 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p18)
ruditapes_c21132	metabolic process	other metabolic processes	P	"Acylpyruvase FAHD1, mitochondrial (EC 3.7.1.5) (Fumarylacetoacetate hydrolase domain-containing protein 1)"
ruditapes_c20446	positive regulation of DNA replication	DNA metabolism	P	CST complex subunit CTC1 (Conserved telomere maintenance component 1)
ruditapes_c28069	proteolysis	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 8 (26S proteasome regulatory subunit RPN12) (Fragment)
ruditapes_c2872	protein K63-linked deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33)
ruditapes_c2872	endocytosis	transport	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33)
ruditapes_c2872	endocytosis	cell organization and biogenesis	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33)
ruditapes_c2872	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33)
ruditapes_c2872	regulation of G-protein coupled receptor protein signaling pathway	signal transduction	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33)
ruditapes_c2872	cell migration	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33)
ruditapes_c2872	axon guidance	developmental processes	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33)
ruditapes_c2872	axon guidance	cell organization and biogenesis	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33)
ruditapes_c2872	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33)
ruditapes_c2872	protein deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33)
ruditapes_c16298	dephosphorylation	other metabolic processes	P	Low molecular weight phosphotyrosine protein phosphatase (LMW-PTP) (LMW-PTPase) (EC 3.1.3.48) (Low molecular weight cytosolic acid phosphatase) (EC 3.1.3.2)
ruditapes_c16298	protein amino acid dephosphorylation	protein metabolism	P	Low molecular weight phosphotyrosine protein phosphatase (LMW-PTP) (LMW-PTPase) (EC 3.1.3.48) (Low molecular weight cytosolic acid phosphatase) (EC 3.1.3.2)
ruditapes_lrc28583	translation	protein metabolism	P	60S ribosomal protein L23
ruditapes_c7275	proteolysis	protein metabolism	P	Mitochondrial intermediate peptidase (MIP) (EC 3.4.24.59)
ruditapes2_c901	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 1 (EC 3.-.-.-) (Adenosine 5'-monophosphoramidase)
ruditapes_c11068	proteolysis	protein metabolism	P	Signal peptidase complex subunit 1 (EC 3.4.-.-) (Microsomal signal peptidase 12 kDa subunit) (SPase 12 kDa subunit)
ruditapes_c11068	signal peptide processing	protein metabolism	P	Signal peptidase complex subunit 1 (EC 3.4.-.-) (Microsomal signal peptidase 12 kDa subunit) (SPase 12 kDa subunit)
ruditapes_c12922	collagen catabolic process	other metabolic processes	P	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Peptidase D) (Proline dipeptidase) (Prolidase)
ruditapes_c12922	cellular process	other biological processes	P	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Peptidase D) (Proline dipeptidase) (Prolidase)
ruditapes_c12922	proteolysis	protein metabolism	P	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Peptidase D) (Proline dipeptidase) (Prolidase)
ruditapes2_c923	protein amino acid glycosylation	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (EC 2.4.99.18) (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDa subunit) (Ribophorin I) (RPN-I) (Ribophorin-1)
ruditapes_c21339	methionine biosynthetic process	other metabolic processes	P	Betaine--homocysteine S-methyltransferase 1 (EC 2.1.1.5)
ruditapes_c21339	methylation	other metabolic processes	P	Betaine--homocysteine S-methyltransferase 1 (EC 2.1.1.5)
ruditapes_lrc37150	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37150	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s36718	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s36718	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s36718	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s36718	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37150	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s36718	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37150	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_s36718	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37150	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc37150	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc33785	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_s36418	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc36267	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_s36418	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc37161	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc37161	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc37161	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc37161	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc30767	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_s36418	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_s36418	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc33785	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc36267	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc30767	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc36267	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc36267	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc30767	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc37161	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_s36418	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc33785	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc30767	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc37161	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc36267	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc33785	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc30767	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc30767	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc33785	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc33785	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_s36418	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_lrc36267	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3)
ruditapes_c3969	protein amino acid phosphorylation	protein metabolism	P	FAST kinase domain-containing protein 5
ruditapes_c3969	cellular respiration	other metabolic processes	P	FAST kinase domain-containing protein 5
ruditapes_s36975	negative regulation of hydrolase activity	other biological processes	P	"ATPase inhibitor, mitochondrial (Inhibitor of F(1)F(o)-ATPase) (IF(1)) (IF1)"
ruditapes_s36975	negative regulation of endothelial cell proliferation	cell cycle and proliferation	P	"ATPase inhibitor, mitochondrial (Inhibitor of F(1)F(o)-ATPase) (IF(1)) (IF1)"
ruditapes_s36975	protein homotetramerization	cell organization and biogenesis	P	"ATPase inhibitor, mitochondrial (Inhibitor of F(1)F(o)-ATPase) (IF(1)) (IF1)"
ruditapes_s36975	regulation of apoptosis	death	P	"ATPase inhibitor, mitochondrial (Inhibitor of F(1)F(o)-ATPase) (IF(1)) (IF1)"
ruditapes_s36975	protein homooligomerization	cell organization and biogenesis	P	"ATPase inhibitor, mitochondrial (Inhibitor of F(1)F(o)-ATPase) (IF(1)) (IF1)"
ruditapes_s36975	negative regulation of nucleotide metabolic process	other metabolic processes	P	"ATPase inhibitor, mitochondrial (Inhibitor of F(1)F(o)-ATPase) (IF(1)) (IF1)"
ruditapes_c20947	biosynthetic process	other metabolic processes	P	Cytosolic 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (FDH) (EC 1.5.1.6) (Aldehyde dehydrogenase family 1 member L1)
ruditapes_c20947	oxidation reduction	other metabolic processes	P	Cytosolic 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (FDH) (EC 1.5.1.6) (Aldehyde dehydrogenase family 1 member L1)
ruditapes_c20947	10-formyltetrahydrofolate catabolic process	other metabolic processes	P	Cytosolic 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (FDH) (EC 1.5.1.6) (Aldehyde dehydrogenase family 1 member L1)
ruditapes_c20947	metabolic process	other metabolic processes	P	Cytosolic 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (FDH) (EC 1.5.1.6) (Aldehyde dehydrogenase family 1 member L1)
ruditapes_c20947	methylation	other metabolic processes	P	Cytosolic 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (FDH) (EC 1.5.1.6) (Aldehyde dehydrogenase family 1 member L1)
ruditapes_c20947	one-carbon compound metabolic process	other metabolic processes	P	Cytosolic 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (FDH) (EC 1.5.1.6) (Aldehyde dehydrogenase family 1 member L1)
ruditapes_c7596	proteolysis	protein metabolism	P	Angiotensin-converting enzyme 2 (EC 3.4.17.23) (ACE-related carboxypeptidase) [Cleaved into: Processed angiotensin-converting enzyme 2]
ruditapes_c767	ribosome biogenesis	other biological processes	P	rRNA-processing protein FCF1 homolog
ruditapes_c767	rRNA processing	RNA metabolism	P	rRNA-processing protein FCF1 homolog
ruditapes_c28828	transport	transport	P	Alpha-tocopherol transfer protein-like
ruditapes_c14371	purine nucleotide biosynthetic process	other metabolic processes	P	Inosine-5'-monophosphate dehydrogenase 1b (IMP dehydrogenase 1b) (IMPD 1b) (IMPDH 1b) (EC 1.1.1.205)
ruditapes_c14371	oxidation reduction	other metabolic processes	P	Inosine-5'-monophosphate dehydrogenase 1b (IMP dehydrogenase 1b) (IMPD 1b) (IMPDH 1b) (EC 1.1.1.205)
ruditapes_c14371	GMP biosynthetic process	other metabolic processes	P	Inosine-5'-monophosphate dehydrogenase 1b (IMP dehydrogenase 1b) (IMPD 1b) (IMPDH 1b) (EC 1.1.1.205)
ruditapes_c6475	phosphorylation	other metabolic processes	P	Glycosaminoglycan xylosylkinase (EC 2.7.1.-) (Xylose kinase)
ruditapes_c6475	embryonic cranial skeleton morphogenesis	developmental processes	P	Glycosaminoglycan xylosylkinase (EC 2.7.1.-) (Xylose kinase)
ruditapes_c6475	proteoglycan biosynthetic process	other metabolic processes	P	Glycosaminoglycan xylosylkinase (EC 2.7.1.-) (Xylose kinase)
ruditapes_c31491	regulation of TOR signaling pathway	signal transduction	P	Intraflagellar transport protein 172 homolog
ruditapes_c31491	multicellular organismal development	developmental processes	P	Intraflagellar transport protein 172 homolog
ruditapes_c31491	cilium assembly	cell organization and biogenesis	P	Intraflagellar transport protein 172 homolog
ruditapes_c31491	photoreceptor cell maintenance	other biological processes	P	Intraflagellar transport protein 172 homolog
ruditapes_c22120	positive regulation of Rab GTPase activity	signal transduction	P	Protein broad-minded
ruditapes_c22120	regulation of Rab GTPase activity	signal transduction	P	Protein broad-minded
ruditapes_c22120	cilium morphogenesis	cell organization and biogenesis	P	Protein broad-minded
ruditapes_c22120	multicellular organismal development	developmental processes	P	Protein broad-minded
ruditapes_c30239	protein transport	transport	P	Sorting nexin-17
ruditapes_c30239	cell communication	other biological processes	P	Sorting nexin-17
ruditapes_c30239	signal transduction	signal transduction	P	Sorting nexin-17
ruditapes_c30239	transport	transport	P	Sorting nexin-17
ruditapes_c28109	negative regulation of translation	protein metabolism	P	Caprin-2 (RNA granule protein 140)
ruditapes_c7206	regulation of growth	other biological processes	P	Caprin-2 (RNA granule protein 140)
ruditapes_c28109	cell differentiation	other biological processes	P	Caprin-2 (RNA granule protein 140)
ruditapes_c28109	positive regulation of dendrite morphogenesis	developmental processes	P	Caprin-2 (RNA granule protein 140)
ruditapes_c28109	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Caprin-2 (RNA granule protein 140)
ruditapes_c7206	negative regulation of translation	protein metabolism	P	Caprin-2 (RNA granule protein 140)
ruditapes_c7206	cell differentiation	other biological processes	P	Caprin-2 (RNA granule protein 140)
ruditapes_c28109	positive regulation of Wnt receptor signaling pathway	signal transduction	P	Caprin-2 (RNA granule protein 140)
ruditapes_c28109	regulation of growth	other biological processes	P	Caprin-2 (RNA granule protein 140)
ruditapes_c7206	positive regulation of Wnt receptor signaling pathway	signal transduction	P	Caprin-2 (RNA granule protein 140)
ruditapes_c7206	positive regulation of dendrite morphogenesis	developmental processes	P	Caprin-2 (RNA granule protein 140)
ruditapes_c7206	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Caprin-2 (RNA granule protein 140)
ruditapes_c7206	dorsal/ventral pattern formation	developmental processes	P	Caprin-2 (RNA granule protein 140)
ruditapes_c28109	dorsal/ventral pattern formation	developmental processes	P	Caprin-2 (RNA granule protein 140)
ruditapes_c27102	negative regulation of actin filament polymerization	protein metabolism	P	Twinfilin-1
ruditapes_c27102	negative regulation of actin filament polymerization	cell organization and biogenesis	P	Twinfilin-1
ruditapes_c27102	sequestering of actin monomers	protein metabolism	P	Twinfilin-1
ruditapes_c27102	sequestering of actin monomers	cell organization and biogenesis	P	Twinfilin-1
ruditapes_c27102	barbed-end actin filament capping	protein metabolism	P	Twinfilin-1
ruditapes_c27102	barbed-end actin filament capping	cell organization and biogenesis	P	Twinfilin-1
ruditapes_c13386	ribosome biogenesis	other biological processes	P	Ribosome production factor 1 (Brix domain-containing protein 5) (Ribosome biogenesis protein RPF1)
ruditapes_c13386	rRNA processing	RNA metabolism	P	Ribosome production factor 1 (Brix domain-containing protein 5) (Ribosome biogenesis protein RPF1)
ruditapes_c24730	potassium ion transport	transport	P	Solute carrier family 12 member 7 (Electroneutral potassium-chloride cotransporter 4) (K-Cl cotransporter 4)
ruditapes_c24730	chloride transport	transport	P	Solute carrier family 12 member 7 (Electroneutral potassium-chloride cotransporter 4) (K-Cl cotransporter 4)
ruditapes_c24730	transport	transport	P	Solute carrier family 12 member 7 (Electroneutral potassium-chloride cotransporter 4) (K-Cl cotransporter 4)
ruditapes_c24730	cell volume homeostasis	other biological processes	P	Solute carrier family 12 member 7 (Electroneutral potassium-chloride cotransporter 4) (K-Cl cotransporter 4)
ruditapes_c24730	sodium ion transport	transport	P	Solute carrier family 12 member 7 (Electroneutral potassium-chloride cotransporter 4) (K-Cl cotransporter 4)
ruditapes_c24730	transmembrane transport	transport	P	Solute carrier family 12 member 7 (Electroneutral potassium-chloride cotransporter 4) (K-Cl cotransporter 4)
ruditapes_c24730	ion transport	transport	P	Solute carrier family 12 member 7 (Electroneutral potassium-chloride cotransporter 4) (K-Cl cotransporter 4)
ruditapes_c21170	metabolic process	other metabolic processes	P	"(-)-endo-fenchol synthase, chloroplastic (EC 4.2.3.10)"
ruditapes_c812	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta') (RNA polymerase subunit beta')
ruditapes_c26154	cellular metabolic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase)
ruditapes_c26154	cellular biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase)
ruditapes_c26154	methionine biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase)
ruditapes_c26154	cellular amino acid biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase)
ruditapes2_c812	O-glycan processing	protein metabolism	P	Glucoside xylosyltransferase 1 (EC 2.4.2.n2) (Glycosyltransferase 8 domain-containing protein 3)
ruditapes2_c2528	synaptic vesicle exocytosis	transport	P	Otoferlin (Fer-1-like protein 2)
ruditapes2_c2528	synaptic vesicle exocytosis	cell-cell signaling	P	Otoferlin (Fer-1-like protein 2)
ruditapes_c11721	translation	protein metabolism	P	"Probable 28S ribosomal protein S10, mitochondrial (MRP-S10) (S10mt)"
ruditapes_c26584	"regulation of transcription, DNA-dependent"	RNA metabolism	P	PHD finger protein 12 (PHD factor 1) (Pf1)
ruditapes_c26584	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	PHD finger protein 12 (PHD factor 1) (Pf1)
ruditapes_c26584	"transcription, DNA-dependent"	RNA metabolism	P	PHD finger protein 12 (PHD factor 1) (Pf1)
ruditapes_c16215	lysosome organization	cell organization and biogenesis	P	Clavesin-2 (Retinaldehyde-binding protein 1-like 2)
ruditapes_c16215	transport	transport	P	Clavesin-2 (Retinaldehyde-binding protein 1-like 2)
ruditapes_c6976	protein transport	transport	P	Vacuolar protein sorting-associated protein 54 (Tumor antigen SLP-8p homolog)
ruditapes_c6976	"retrograde transport, endosome to Golgi"	transport	P	Vacuolar protein sorting-associated protein 54 (Tumor antigen SLP-8p homolog)
ruditapes_c6976	neurofilament cytoskeleton organization	cell organization and biogenesis	P	Vacuolar protein sorting-associated protein 54 (Tumor antigen SLP-8p homolog)
ruditapes_c6976	growth	other biological processes	P	Vacuolar protein sorting-associated protein 54 (Tumor antigen SLP-8p homolog)
ruditapes_c6976	transport	transport	P	Vacuolar protein sorting-associated protein 54 (Tumor antigen SLP-8p homolog)
ruditapes_c6976	musculoskeletal movement	other biological processes	P	Vacuolar protein sorting-associated protein 54 (Tumor antigen SLP-8p homolog)
ruditapes_c6976	homeostasis of number of cells within a tissue	other biological processes	P	Vacuolar protein sorting-associated protein 54 (Tumor antigen SLP-8p homolog)
ruditapes_c25157	transport	transport	P	Syntaxin-binding protein 5-like
ruditapes_c25157	exocytosis	transport	P	Syntaxin-binding protein 5-like
ruditapes_c25157	vesicle-mediated transport	transport	P	Syntaxin-binding protein 5-like
ruditapes_c25157	protein transport	transport	P	Syntaxin-binding protein 5-like
ruditapes_c11960	oxidation reduction	other metabolic processes	P	Dehydrogenase/reductase SDR family member 13 (EC 1.1.-.-)
ruditapes_c11960	metabolic process	other metabolic processes	P	Dehydrogenase/reductase SDR family member 13 (EC 1.1.-.-)
ruditapes2_c822	biological_process	other biological processes	P	ATP-binding cassette sub-family A member 13
ruditapes_c30675	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 13
ruditapes_c18955	biological_process	other biological processes	P	ATP-binding cassette sub-family A member 13
ruditapes2_c822	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 13
ruditapes2_c822	transport	transport	P	ATP-binding cassette sub-family A member 13
ruditapes_c30675	transport	transport	P	ATP-binding cassette sub-family A member 13
ruditapes_c30675	biological_process	other biological processes	P	ATP-binding cassette sub-family A member 13
ruditapes_c18955	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 13
ruditapes_c18955	transport	transport	P	ATP-binding cassette sub-family A member 13
ruditapes_c11449	biological_process	other biological processes	P	Pre-rRNA-processing protein TSR1 homolog
ruditapes_c11449	ribosome biogenesis	other biological processes	P	Pre-rRNA-processing protein TSR1 homolog
ruditapes_c11449	ribosome assembly	cell organization and biogenesis	P	Pre-rRNA-processing protein TSR1 homolog
ruditapes_c22407	biological_process	other biological processes	P	RING finger protein 145
ruditapes_c1902	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 homolog
ruditapes_c36084	biological_process	other biological processes	P	Vitelline membrane outer layer protein 1 homolog
ruditapes_c23839	biological_process	other biological processes	P	Vitelline membrane outer layer protein 1 homolog
ruditapes_c23839	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 homolog
ruditapes_c36084	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 homolog
ruditapes_c1902	biological_process	other biological processes	P	Vitelline membrane outer layer protein 1 homolog
ruditapes_c28692	DNA repair	stress response	P	Fanconi anemia group J protein homolog (Protein FACJ) (EC 3.6.4.13) (ATP-dependent RNA helicase BRIP1) (BRCA1-associated C-terminal helicase 1) (BRCA1-interacting protein C-terminal helicase 1) (BRCA1-interacting protein 1)
ruditapes_c28692	DNA repair	DNA metabolism	P	Fanconi anemia group J protein homolog (Protein FACJ) (EC 3.6.4.13) (ATP-dependent RNA helicase BRIP1) (BRCA1-associated C-terminal helicase 1) (BRCA1-interacting protein C-terminal helicase 1) (BRCA1-interacting protein 1)
ruditapes_c28692	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Fanconi anemia group J protein homolog (Protein FACJ) (EC 3.6.4.13) (ATP-dependent RNA helicase BRIP1) (BRCA1-associated C-terminal helicase 1) (BRCA1-interacting protein C-terminal helicase 1) (BRCA1-interacting protein 1)
ruditapes_c28692	response to DNA damage stimulus	stress response	P	Fanconi anemia group J protein homolog (Protein FACJ) (EC 3.6.4.13) (ATP-dependent RNA helicase BRIP1) (BRCA1-associated C-terminal helicase 1) (BRCA1-interacting protein C-terminal helicase 1) (BRCA1-interacting protein 1)
ruditapes_c25029	phosphorylation	other metabolic processes	P	Uncharacterized serine/threonine-protein kinase SgK494 (EC 2.7.11.1) (Sugen kinase 494)
ruditapes_c25029	biological_process	other biological processes	P	Uncharacterized serine/threonine-protein kinase SgK494 (EC 2.7.11.1) (Sugen kinase 494)
ruditapes_c25029	protein amino acid phosphorylation	protein metabolism	P	Uncharacterized serine/threonine-protein kinase SgK494 (EC 2.7.11.1) (Sugen kinase 494)
ruditapes_c18549	multicellular organismal development	developmental processes	P	Dyslexia-associated protein KIAA0319 homolog
ruditapes_c18549	nervous system development	developmental processes	P	Dyslexia-associated protein KIAA0319 homolog
ruditapes_c18549	neuron migration	developmental processes	P	Dyslexia-associated protein KIAA0319 homolog
ruditapes_c8716	signal transduction	signal transduction	P	Rho GTPase-activating protein 21 (Rho GTPase-activating protein 10) (Rho-type GTPase-activating protein 21)
ruditapes_c8716	positive regulation of GTPase activity	other biological processes	P	Rho GTPase-activating protein 21 (Rho GTPase-activating protein 10) (Rho-type GTPase-activating protein 21)
ruditapes2_lrc3741	signal transduction	signal transduction	P	Probable G-protein coupled receptor 110 (G-protein coupled receptor KPG
ruditapes2_lrc3741	cell surface receptor linked signal transduction	signal transduction	P	Probable G-protein coupled receptor 110 (G-protein coupled receptor KPG
ruditapes2_lrc3741	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 110 (G-protein coupled receptor KPG
ruditapes2_lrc3741	neuropeptide signaling pathway	signal transduction	P	Probable G-protein coupled receptor 110 (G-protein coupled receptor KPG
ruditapes_s35965	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 158
ruditapes_s35965	signal transduction	signal transduction	P	Probable G-protein coupled receptor 158
ruditapes_c25252	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	DEP domain-containing protein 1A
ruditapes_c25252	"transcription, DNA-dependent"	RNA metabolism	P	DEP domain-containing protein 1A
ruditapes_c25252	"regulation of transcription, DNA-dependent"	RNA metabolism	P	DEP domain-containing protein 1A
ruditapes_c25252	signal transduction	signal transduction	P	DEP domain-containing protein 1A
ruditapes_c25252	positive regulation of GTPase activity	other biological processes	P	DEP domain-containing protein 1A
ruditapes_c21779	protein complex assembly	cell organization and biogenesis	P	ATP synthase mitochondrial F1 complex assembly factor 1 (ATP11 homolog)
ruditapes_c16708	cilium axoneme assembly	cell organization and biogenesis	P	Radial spoke head protein 4 homolog A (Radial spoke head-like protein 3)
ruditapes_c21827	glutamine biosynthetic process	other metabolic processes	P	Lengsin (Glutamate-ammonia ligase domain-containing protein 1) (Lens glutamine synthase-like)
ruditapes_c21827	nitrogen compound metabolic process	other metabolic processes	P	Lengsin (Glutamate-ammonia ligase domain-containing protein 1) (Lens glutamine synthase-like)
ruditapes_c18376	transport	transport	P	Sodium-dependent glucose transporter 1
ruditapes_c18376	carbohydrate transport	transport	P	Sodium-dependent glucose transporter 1
ruditapes_c18376	sodium ion transport	transport	P	Sodium-dependent glucose transporter 1
ruditapes_c18376	transmembrane transport	transport	P	Sodium-dependent glucose transporter 1
ruditapes_c18376	ion transport	transport	P	Sodium-dependent glucose transporter 1
ruditapes2_c393	regulation of small GTPase mediated signal transduction	signal transduction	P	Rho GTPase-activating protein 40 (Rho-type GTPase-activating protein 40)
ruditapes2_c393	small GTPase mediated signal transduction	signal transduction	P	Rho GTPase-activating protein 40 (Rho-type GTPase-activating protein 40)
ruditapes2_c393	signal transduction	signal transduction	P	Rho GTPase-activating protein 40 (Rho-type GTPase-activating protein 40)
ruditapes2_c393	positive regulation of GTPase activity	other biological processes	P	Rho GTPase-activating protein 40 (Rho-type GTPase-activating protein 40)
ruditapes2_c563	biological_process	other biological processes	P	Mitochondrial inner membrane organizing system protein 1
ruditapes_c18016	actin cytoskeleton organization	cell organization and biogenesis	P	Formin-E (Diaphanous-related formin dia3)
ruditapes_c18016	cellular component organization	cell organization and biogenesis	P	Formin-E (Diaphanous-related formin dia3)
ruditapes_c30998	fatty acid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c30998	estrogen biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c22854	estrogen biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c30998	lipid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c22854	estrogen metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c3359	estrogen metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c22854	lipid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c30998	metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c22854	steroid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c3359	estrogen biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c3359	fatty acid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c22854	metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c3359	metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c22854	oxidation reduction	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c3359	androgen metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c30998	oxidation reduction	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c30998	steroid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c30998	androgen metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c3359	oxidation reduction	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c22854	androgen metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c22854	fatty acid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c3359	steroid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c3359	lipid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c30998	estrogen metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_s39038	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	"Histone acetyltransferase KAT6A (EC 2.3.1.48) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (MYST-3) (Monocytic leukemia zinc finger homolog) (Monocytic leukemia zinc finger protein)"
ruditapes_s39038	myeloid cell differentiation	developmental processes	P	"Histone acetyltransferase KAT6A (EC 2.3.1.48) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (MYST-3) (Monocytic leukemia zinc finger homolog) (Monocytic leukemia zinc finger protein)"
ruditapes_s39038	"transcription, DNA-dependent"	RNA metabolism	P	"Histone acetyltransferase KAT6A (EC 2.3.1.48) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (MYST-3) (Monocytic leukemia zinc finger homolog) (Monocytic leukemia zinc finger protein)"
ruditapes_s39038	chromatin modification	cell organization and biogenesis	P	"Histone acetyltransferase KAT6A (EC 2.3.1.48) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (MYST-3) (Monocytic leukemia zinc finger homolog) (Monocytic leukemia zinc finger protein)"
ruditapes_s39038	nucleosome assembly	cell organization and biogenesis	P	"Histone acetyltransferase KAT6A (EC 2.3.1.48) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (MYST-3) (Monocytic leukemia zinc finger homolog) (Monocytic leukemia zinc finger protein)"
ruditapes_s39038	histone H3 acetylation	protein metabolism	P	"Histone acetyltransferase KAT6A (EC 2.3.1.48) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (MYST-3) (Monocytic leukemia zinc finger homolog) (Monocytic leukemia zinc finger protein)"
ruditapes_s39038	histone H3 acetylation	cell organization and biogenesis	P	"Histone acetyltransferase KAT6A (EC 2.3.1.48) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (MYST-3) (Monocytic leukemia zinc finger homolog) (Monocytic leukemia zinc finger protein)"
ruditapes_s39038	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Histone acetyltransferase KAT6A (EC 2.3.1.48) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (MYST-3) (Monocytic leukemia zinc finger homolog) (Monocytic leukemia zinc finger protein)"
ruditapes_s39038	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	"Histone acetyltransferase KAT6A (EC 2.3.1.48) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (MYST-3) (Monocytic leukemia zinc finger homolog) (Monocytic leukemia zinc finger protein)"
ruditapes_s39038	histone acetylation	protein metabolism	P	"Histone acetyltransferase KAT6A (EC 2.3.1.48) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (MYST-3) (Monocytic leukemia zinc finger homolog) (Monocytic leukemia zinc finger protein)"
ruditapes_s39038	histone acetylation	cell organization and biogenesis	P	"Histone acetyltransferase KAT6A (EC 2.3.1.48) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (MYST-3) (Monocytic leukemia zinc finger homolog) (Monocytic leukemia zinc finger protein)"
ruditapes_c10212	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 15 (Mediator complex subunit 15)
ruditapes_c10212	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 15 (Mediator complex subunit 15)
ruditapes_c10212	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 15 (Mediator complex subunit 15)
ruditapes_c1740	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Neuroblastoma-amplified sequence (Neuroblastoma-amplified gene protein homolog)
ruditapes_c1740	embryonic development	developmental processes	P	Neuroblastoma-amplified sequence (Neuroblastoma-amplified gene protein homolog)
ruditapes_c26611	cilium axoneme assembly	cell organization and biogenesis	P	Radial spoke head protein 9 homolog
ruditapes2_c539	catecholamine metabolic process	other metabolic processes	P	DBH-like monooxygenase protein 1 homolog (EC 1.14.17.-)
ruditapes2_c2905	catecholamine metabolic process	other metabolic processes	P	DBH-like monooxygenase protein 1 homolog (EC 1.14.17.-)
ruditapes2_c2905	oxidation reduction	other metabolic processes	P	DBH-like monooxygenase protein 1 homolog (EC 1.14.17.-)
ruditapes2_c539	oxidation reduction	other metabolic processes	P	DBH-like monooxygenase protein 1 homolog (EC 1.14.17.-)
ruditapes_c13790	response to biotic stimulus	other biological processes	P	Synapse differentiation-inducing gene protein 1-like (Capucin) (Dispanin subfamily C member 1) (DSPC1) (Transmembrane protein 90A)
ruditapes_c3099	transport	transport	P	Lysosomal-associated transmembrane protein 4B
ruditapes2_c1941	isoprenoid biosynthetic process	other metabolic processes	P	Decaprenyl-diphosphate synthase subunit 2 (EC 2.5.1.91) (All-trans-decaprenyl-diphosphate synthase subunit 2) (Decaprenyl pyrophosphate synthase subunit 2)
ruditapes2_c1941	ubiquinone biosynthetic process	other metabolic processes	P	Decaprenyl-diphosphate synthase subunit 2 (EC 2.5.1.91) (All-trans-decaprenyl-diphosphate synthase subunit 2) (Decaprenyl pyrophosphate synthase subunit 2)
ruditapes_c12422	proteolysis involved in cellular protein catabolic process	protein metabolism	P	"ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial"
ruditapes2_c2534	biological_process	other biological processes	P	"ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial"
ruditapes_c12422	positive regulation of peptidase activity	other biological processes	P	"ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial"
ruditapes2_c2534	protein folding	protein metabolism	P	"ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial"
ruditapes_c12422	ATP catabolic process	other metabolic processes	P	"ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial"
ruditapes_c12422	protein folding	protein metabolism	P	"ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial"
ruditapes2_c2534	positive regulation of peptidase activity	other biological processes	P	"ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial"
ruditapes_c12422	biological_process	other biological processes	P	"ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial"
ruditapes2_c2534	ATP catabolic process	other metabolic processes	P	"ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial"
ruditapes2_c2534	proteolysis involved in cellular protein catabolic process	protein metabolism	P	"ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial"
ruditapes_c14468	transcription initiation from RNA polymerase II promoter	RNA metabolism	P	TATA box-binding protein-like protein 1 (TBP-like protein 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (TBP-like factor)
ruditapes_c14468	transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	TATA box-binding protein-like protein 1 (TBP-like protein 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (TBP-like factor)
ruditapes_c14468	"transcription, DNA-dependent"	RNA metabolism	P	TATA box-binding protein-like protein 1 (TBP-like protein 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (TBP-like factor)
ruditapes_c14468	multicellular organismal development	developmental processes	P	TATA box-binding protein-like protein 1 (TBP-like protein 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (TBP-like factor)
ruditapes_c14468	transcription from RNA polymerase II promoter	RNA metabolism	P	TATA box-binding protein-like protein 1 (TBP-like protein 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (TBP-like factor)
ruditapes_c14468	"regulation of transcription, DNA-dependent"	RNA metabolism	P	TATA box-binding protein-like protein 1 (TBP-like protein 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (TBP-like factor)
ruditapes_c14468	embryonic development	developmental processes	P	TATA box-binding protein-like protein 1 (TBP-like protein 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (TBP-like factor)
ruditapes_c23961	neural crest cell migration	developmental processes	P	Collectin-11
ruditapes_c23961	multicellular organismal development	developmental processes	P	Collectin-11
ruditapes_c23961	developmental process	other biological processes	P	Collectin-11
ruditapes_c25208	dephosphorylation	other metabolic processes	P	CTD nuclear envelope phosphatase 1B (EC 3.1.3.16) (Dullard-like protein) (Serine/threonine-protein phosphatase dullard-B)
ruditapes_c25208	protein amino acid dephosphorylation	protein metabolism	P	CTD nuclear envelope phosphatase 1B (EC 3.1.3.16) (Dullard-like protein) (Serine/threonine-protein phosphatase dullard-B)
ruditapes_c25208	nuclear envelope organization	cell organization and biogenesis	P	CTD nuclear envelope phosphatase 1B (EC 3.1.3.16) (Dullard-like protein) (Serine/threonine-protein phosphatase dullard-B)
ruditapes_c25208	positive regulation of triglyceride biosynthetic process	other metabolic processes	P	CTD nuclear envelope phosphatase 1B (EC 3.1.3.16) (Dullard-like protein) (Serine/threonine-protein phosphatase dullard-B)
ruditapes_c10022	protein targeting to Golgi	transport	P	Golgin subfamily A member 4
ruditapes_c25974	peroxisome organization	cell organization and biogenesis	P	Transmembrane protein 135 (Peroxisomal membrane protein 52) (PMP52)
ruditapes_c7379	translation	protein metabolism	P	"39S ribosomal protein L20, mitochondrial (L20mt) (MRP-L20)"
ruditapes_c24072	biological_process	other biological processes	P	Carboxypeptidase A6 (EC 3.4.17.1)
ruditapes_c24072	proteolysis	protein metabolism	P	Carboxypeptidase A6 (EC 3.4.17.1)
ruditapes_c10034	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor family C group 6 member A (Odorant receptor ZO6)
ruditapes_c10034	sensory perception of smell	other biological processes	P	G-protein coupled receptor family C group 6 member A (Odorant receptor ZO6)
ruditapes_c10034	response to stimulus	other biological processes	P	G-protein coupled receptor family C group 6 member A (Odorant receptor ZO6)
ruditapes_c10034	cellular calcium ion homeostasis	other biological processes	P	G-protein coupled receptor family C group 6 member A (Odorant receptor ZO6)
ruditapes_c10034	signal transduction	signal transduction	P	G-protein coupled receptor family C group 6 member A (Odorant receptor ZO6)
ruditapes_c4754	immune response	other biological processes	P	Tumor necrosis factor ligand superfamily member 15 (TNF ligand-related molecule 1) (Vascular endothelial cell growth inhibitor)
ruditapes_c14756	immune response	other biological processes	P	Tumor necrosis factor ligand superfamily member 15 (TNF ligand-related molecule 1) (Vascular endothelial cell growth inhibitor)
ruditapes2_c1096	immune response	other biological processes	P	Tumor necrosis factor ligand superfamily member 15 (TNF ligand-related molecule 1) (Vascular endothelial cell growth inhibitor)
ruditapes2_c432	immune response	other biological processes	P	Tumor necrosis factor ligand superfamily member 15 (TNF ligand-related molecule 1) (Vascular endothelial cell growth inhibitor)
ruditapes_lrc19861	protein amino acid phosphorylation	protein metabolism	P	Putative serine/threonine-protein kinase L673 (EC 2.7.11.1)
ruditapes_lrc19861	phosphorylation	other metabolic processes	P	Putative serine/threonine-protein kinase L673 (EC 2.7.11.1)
ruditapes_c7716	metabolic process	other metabolic processes	P	Uncharacterized protein L136
ruditapes2_lrc2102	cellular alcohol metabolic process	other metabolic processes	P	Putative GMC-type oxidoreductase R135 (EC 1.-.-.-)
ruditapes2_lrc2102	oxidation reduction	other metabolic processes	P	Putative GMC-type oxidoreductase R135 (EC 1.-.-.-)
ruditapes_c11000	metabolic process	other metabolic processes	P	Uncharacterized acetyltransferase R151 (EC 2.3.1.-)
ruditapes_c24441	cellular amino acid metabolic process	other metabolic processes	P	Putative ankyrin repeat protein L271
ruditapes_c21690	DNA repair	stress response	P	Putative ATP-dependent RNA helicase R290 (EC 3.6.4.13)
ruditapes_c21690	DNA repair	DNA metabolism	P	Putative ATP-dependent RNA helicase R290 (EC 3.6.4.13)
ruditapes_c21690	DNA replication	DNA metabolism	P	Putative ATP-dependent RNA helicase R290 (EC 3.6.4.13)
ruditapes_c21690	DNA recombination	DNA metabolism	P	Putative ATP-dependent RNA helicase R290 (EC 3.6.4.13)
ruditapes_c25469	proteolysis	protein metabolism	P	Putative rhomboid protein L523 (EC 3.4.21.-)
ruditapes_c26661	potassium ion transport	transport	P	Putative BTB/POZ domain-containing protein R541
ruditapes_s38313	metabolic process	other metabolic processes	P	Uncharacterized protein L432
ruditapes_c14542	protein modification process	protein metabolism	P	Uncharacterized protein R349
ruditapes2_lrc4070	DNA repair	stress response	P	Putative endonuclease L386 (EC 3.1.-.-)
ruditapes2_lrc4070	DNA repair	DNA metabolism	P	Putative endonuclease L386 (EC 3.1.-.-)
ruditapes_c6465	GTP catabolic process	other metabolic processes	P	Uncharacterized protein R618
ruditapes_c19108	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c19108	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c19108	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c19108	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c19108	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c21423	defense response	stress response	P	Varv peptide A/Kalata-B1 (Cyclotide k1) [Cleaved into: Varv peptide A; Kalata-B1]
ruditapes_c21423	cytolysis	death	P	Varv peptide A/Kalata-B1 (Cyclotide k1) [Cleaved into: Varv peptide A; Kalata-B1]
ruditapes_c13693	coenzyme biosynthetic process	other metabolic processes	P	"FO synthase subunit 1 (EC 2.5.1.77) (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1)"
ruditapes_lrc34912	cellular amino acid biosynthetic process	other metabolic processes	P	Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)
ruditapes_lrc34912	histidine biosynthetic process	other metabolic processes	P	Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)
ruditapes2_c493	tRNA processing	RNA metabolism	P	Ribonuclease P protein component 2 (RNase P component 2) (EC 3.1.26.5)
ruditapes_c20530	nervous system development	developmental processes	P	Dyslexia susceptibility 1 candidate gene 1 protein homolog
ruditapes_c20530	regulation of estrogen receptor signaling pathway	signal transduction	P	Dyslexia susceptibility 1 candidate gene 1 protein homolog
ruditapes_c20530	neuron migration	developmental processes	P	Dyslexia susceptibility 1 candidate gene 1 protein homolog
ruditapes_c27982	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Scm-like with four MBT domains protein 2
ruditapes_c30044	negative regulation of Ras GTPase activity	signal transduction	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	negative regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	negative regulation of epithelial cell proliferation	cell cycle and proliferation	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	negative regulation of fibroblast proliferation	cell cycle and proliferation	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	positive regulation of signal transduction	signal transduction	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	positive regulation of JUN kinase activity	signal transduction	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	positive regulation of JUN kinase activity	stress response	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	positive regulation of JUN kinase activity	protein metabolism	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	activation of JUN kinase activity	signal transduction	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	activation of JUN kinase activity	stress response	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	activation of JUN kinase activity	protein metabolism	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	positive regulation of apoptosis	death	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	apoptosis in response to endoplasmic reticulum stress	death	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	negative regulation of MAP kinase activity	other metabolic processes	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	negative regulation of epithelial to mesenchymal transition	developmental processes	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	negative regulation of epithelial to mesenchymal transition	cell organization and biogenesis	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	negative regulation of epithelial cell migration	other biological processes	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	signal transduction	signal transduction	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	positive regulation of GTPase activity	other biological processes	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	regulation of small GTPase mediated signal transduction	signal transduction	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	negative regulation of Ras protein signal transduction	signal transduction	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c30044	positive regulation of Ras GTPase activity	signal transduction	P	Disabled homolog 2-interacting protein (DAB2 interaction protein) (DAB2-interacting protein) (ASK-interacting protein 1) (AIP-1) (DOC-2/DAB-2 interactive protein)
ruditapes_c9342	recognition of apoptotic cell	transport	P	Platelet endothelial aggregation receptor 1 (hPEAR1) (Multiple epidermal growth factor-like domains protein 12) (Multiple EGF-like domains protein 12)
ruditapes_c9342	recognition of apoptotic cell	cell organization and biogenesis	P	Platelet endothelial aggregation receptor 1 (hPEAR1) (Multiple epidermal growth factor-like domains protein 12) (Multiple EGF-like domains protein 12)
ruditapes_c28673	lipid metabolic process	other metabolic processes	P	Lipase member M (EC 3.1.1.-) (Lipase-like abhydrolase domain-containing protein 3)
ruditapes_c28673	lipid catabolic process	other metabolic processes	P	Lipase member M (EC 3.1.1.-) (Lipase-like abhydrolase domain-containing protein 3)
ruditapes_c27606	multicellular organismal development	developmental processes	P	Zinc finger MYM-type protein 4 (Zinc finger protein 262)
ruditapes_c27606	regulation of cell morphogenesis	cell organization and biogenesis	P	Zinc finger MYM-type protein 4 (Zinc finger protein 262)
ruditapes_c27606	cytoskeleton organization	cell organization and biogenesis	P	Zinc finger MYM-type protein 4 (Zinc finger protein 262)
ruditapes2_c4654	UDP-glucose transport	transport	P	UPF0014 membrane protein STAR2 (Protein SENSITIVE TO ALUMINUM RHIZOTOXICITY 2)
ruditapes2_c4654	response to aluminum ion	other biological processes	P	UPF0014 membrane protein STAR2 (Protein SENSITIVE TO ALUMINUM RHIZOTOXICITY 2)
ruditapes_s34275	response to aluminum ion	other biological processes	P	UPF0014 membrane protein STAR2 (Protein SENSITIVE TO ALUMINUM RHIZOTOXICITY 2)
ruditapes_s34275	UDP-glucose transport	transport	P	UPF0014 membrane protein STAR2 (Protein SENSITIVE TO ALUMINUM RHIZOTOXICITY 2)
ruditapes2_c2733	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c2733	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c2733	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c2733	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c2733	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c2733	metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c2733	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c2733	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c26670	transport	transport	P	Teichoic acids export ATP-binding protein TagH (EC 3.6.3.40)
ruditapes_c26670	ATP catabolic process	other metabolic processes	P	Teichoic acids export ATP-binding protein TagH (EC 3.6.3.40)
ruditapes_c26670	teichoic acid transport	transport	P	Teichoic acids export ATP-binding protein TagH (EC 3.6.3.40)
ruditapes_c29154	histidine metabolic process	other metabolic processes	P	Urocanate hydratase (Urocanase) (EC 4.2.1.49) (Imidazolonepropionate hydrolase)
ruditapes_c29154	histidine catabolic process	other metabolic processes	P	Urocanate hydratase (Urocanase) (EC 4.2.1.49) (Imidazolonepropionate hydrolase)
ruditapes_c19101	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c19101	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c19101	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c18405	translation	protein metabolism	P	50S ribosomal protein L32
ruditapes_c12216	rRNA processing	RNA metabolism	P	Ribosome maturation factor RimM
ruditapes_c12216	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimM
ruditapes_c18713	tricarboxylic acid cycle	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c18713	oxidation reduction	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c18713	metabolic process	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c18713	glycolysis	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c4853	metabolic process	other metabolic processes	P	Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) (PSAT)
ruditapes_c4853	L-serine biosynthetic process	other metabolic processes	P	Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) (PSAT)
ruditapes_c4853	cellular amino acid biosynthetic process	other metabolic processes	P	Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) (PSAT)
ruditapes2_c1254	metabolic process	other metabolic processes	P	Histidinol dehydrogenase 1 (HDH 1) (EC 1.1.1.23)
ruditapes2_c1254	histidine biosynthetic process	other metabolic processes	P	Histidinol dehydrogenase 1 (HDH 1) (EC 1.1.1.23)
ruditapes2_c1254	oxidation reduction	other metabolic processes	P	Histidinol dehydrogenase 1 (HDH 1) (EC 1.1.1.23)
ruditapes2_c1254	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol dehydrogenase 1 (HDH 1) (EC 1.1.1.23)
ruditapes_c17620	methionine transport	transport	P	Methionine import ATP-binding protein MetN 1 (EC 3.6.3.-)
ruditapes_c17620	ATP catabolic process	other metabolic processes	P	Methionine import ATP-binding protein MetN 1 (EC 3.6.3.-)
ruditapes_c17620	transport	transport	P	Methionine import ATP-binding protein MetN 1 (EC 3.6.3.-)
ruditapes_c17620	amino acid transport	transport	P	Methionine import ATP-binding protein MetN 1 (EC 3.6.3.-)
ruditapes_c18033	protein transport	transport	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c20034	protein transport	transport	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c18033	multicellular organismal development	developmental processes	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c20034	transport	transport	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c18033	transport	transport	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c20034	multicellular organismal development	developmental processes	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c29856	isoprenoid biosynthetic process	other metabolic processes	P	Isopentenyl-diphosphate delta-isomerase (IPP isomerase) (EC 5.3.3.2) (Isopentenyl pyrophosphate isomerase)
ruditapes_c29856	oxidation reduction	other metabolic processes	P	Isopentenyl-diphosphate delta-isomerase (IPP isomerase) (EC 5.3.3.2) (Isopentenyl pyrophosphate isomerase)
ruditapes_c8477	regulation of DNA repair	stress response	P	Regulatory protein RecX
ruditapes_c8477	regulation of DNA repair	DNA metabolism	P	Regulatory protein RecX
ruditapes_c21930	methylation	other metabolic processes	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c21930	RNA processing	RNA metabolism	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c21930	rRNA processing	RNA metabolism	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c21930	RNA methylation	RNA metabolism	P	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)
ruditapes_c11671	biotin biosynthetic process	other metabolic processes	P	Pimelyl-[acyl-carrier protein] methyl ester esterase (EC 3.1.1.85) (Biotin synthesis protein BioH) (Carboxylesterase BioH)
ruditapes_c23458	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c23458	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c23458	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c23458	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c23458	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c25869	gluconeogenesis	other metabolic processes	P	Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI)
ruditapes_c25869	glycolysis	other metabolic processes	P	Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI)
ruditapes_c27328	translation	protein metabolism	P	50S ribosomal protein L31
ruditapes_c16494	translation	protein metabolism	P	50S ribosomal protein L29
ruditapes_c21231	nucleotide metabolic process	other metabolic processes	P	Non-canonical purine NTP pyrophosphatase (EC 3.6.1.19) (Non-standard purine NTP pyrophosphatase) (Nucleoside-triphosphate diphosphatase) (Nucleoside-triphosphate pyrophosphatase) (NTPase)
ruditapes_c23465	dephosphorylation	other metabolic processes	P	Histidine biosynthesis bifunctional protein HisB [Includes: Histidinol-phosphatase (EC 3.1.3.15); Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)]
ruditapes_c23465	metabolic process	other metabolic processes	P	Histidine biosynthesis bifunctional protein HisB [Includes: Histidinol-phosphatase (EC 3.1.3.15); Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)]
ruditapes_c23465	histidine biosynthetic process	other metabolic processes	P	Histidine biosynthesis bifunctional protein HisB [Includes: Histidinol-phosphatase (EC 3.1.3.15); Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)]
ruditapes_c23465	cellular amino acid biosynthetic process	other metabolic processes	P	Histidine biosynthesis bifunctional protein HisB [Includes: Histidinol-phosphatase (EC 3.1.3.15); Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19)]
ruditapes_c7303	protein folding	protein metabolism	P	ATP-dependent Clp protease ATP-binding subunit ClpX
ruditapes_c29529	cation transport	transport	P	Probable cation-transporting ATPase 13A3 (EC 3.6.3.-)
ruditapes_c29529	biological_process	other biological processes	P	Probable cation-transporting ATPase 13A3 (EC 3.6.3.-)
ruditapes_c29529	ATP catabolic process	other metabolic processes	P	Probable cation-transporting ATPase 13A3 (EC 3.6.3.-)
ruditapes2_c3374	muscle organ development	developmental processes	P	Transgelin-2
ruditapes_c8724	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4)
ruditapes_c8724	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4)
ruditapes_c8724	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4)
ruditapes_c1565	rRNA processing	RNA metabolism	P	Small subunit processome component 20 homolog (Down-regulated in metastasis protein)
ruditapes_c10878	proteolysis	protein metabolism	P	Cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase 3) (LAP-3) (Leucyl aminopeptidase) (Proline aminopeptidase) (EC 3.4.11.5) (Prolyl aminopeptidase)
ruditapes_c10878	protein metabolic process	protein metabolism	P	Cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase 3) (LAP-3) (Leucyl aminopeptidase) (Proline aminopeptidase) (EC 3.4.11.5) (Prolyl aminopeptidase)
ruditapes_c16122	carbohydrate metabolic process	other metabolic processes	P	N-acetylneuraminate lyase B (NALase B) (EC 4.1.3.3) (N-acetylneuraminate pyruvate-lyase B) (N-acetylneuraminic acid aldolase B) (Sialate lyase B) (Sialate-pyruvate lyase B) (Sialic acid aldolase B) (Sialic acid lyase B)
ruditapes_c16122	metabolic process	other metabolic processes	P	N-acetylneuraminate lyase B (NALase B) (EC 4.1.3.3) (N-acetylneuraminate pyruvate-lyase B) (N-acetylneuraminic acid aldolase B) (Sialate lyase B) (Sialate-pyruvate lyase B) (Sialic acid aldolase B) (Sialic acid lyase B)
ruditapes_c27060	inositol metabolic process	other metabolic processes	P	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 (EC 2.7.4.21) (EC 2.7.4.24) (Diphosphoinositol pentakisphosphate kinase 2) (Histidine acid phosphatase domain-containing protein 1) (InsP6 and PP-IP5 kinase 2) (VIP1 homolog 2)
ruditapes_c27060	phosphorylation	other metabolic processes	P	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 (EC 2.7.4.21) (EC 2.7.4.24) (Diphosphoinositol pentakisphosphate kinase 2) (Histidine acid phosphatase domain-containing protein 1) (InsP6 and PP-IP5 kinase 2) (VIP1 homolog 2)
ruditapes_c17613	protein tetramerization	cell organization and biogenesis	P	Cleavage and polyadenylation specificity factor subunit 7
ruditapes_c17613	mRNA processing	RNA metabolism	P	Cleavage and polyadenylation specificity factor subunit 7
ruditapes_c8398	actin filament capping	protein metabolism	P	F-actin-capping protein subunit beta (CapZ beta)
ruditapes_c8398	actin filament capping	cell organization and biogenesis	P	F-actin-capping protein subunit beta (CapZ beta)
ruditapes_c8398	regulation of cell morphogenesis	cell organization and biogenesis	P	F-actin-capping protein subunit beta (CapZ beta)
ruditapes_c8398	actin cytoskeleton organization	cell organization and biogenesis	P	F-actin-capping protein subunit beta (CapZ beta)
ruditapes_c25851	regulation of cell morphogenesis	cell organization and biogenesis	P	F-actin-capping protein subunit beta (CapZ beta)
ruditapes_c25851	actin cytoskeleton organization	cell organization and biogenesis	P	F-actin-capping protein subunit beta (CapZ beta)
ruditapes_c8398	cytoskeleton organization	cell organization and biogenesis	P	F-actin-capping protein subunit beta (CapZ beta)
ruditapes_c25851	actin filament capping	protein metabolism	P	F-actin-capping protein subunit beta (CapZ beta)
ruditapes_c25851	actin filament capping	cell organization and biogenesis	P	F-actin-capping protein subunit beta (CapZ beta)
ruditapes_c25851	cytoskeleton organization	cell organization and biogenesis	P	F-actin-capping protein subunit beta (CapZ beta)
ruditapes_c16638	glycoprotein catabolic process	other metabolic processes	P	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (PNGase) (EC 3.5.1.52) (N-glycanase 1) (Peptide:N-glycanase)
ruditapes_c16380	negative regulation of Schwann cell proliferation	cell cycle and proliferation	P	RING finger protein 10
ruditapes_c16380	negative regulation of Schwann cell proliferation	developmental processes	P	RING finger protein 10
ruditapes_c16380	positive regulation of myelination	developmental processes	P	RING finger protein 10
ruditapes_c16380	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RING finger protein 10
ruditapes_c16380	"transcription, DNA-dependent"	RNA metabolism	P	RING finger protein 10
ruditapes_c16380	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	RING finger protein 10
ruditapes_c1574	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes2_c1482	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes_c1574	histone H3 acetylation	protein metabolism	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes_c1574	histone H3 acetylation	cell organization and biogenesis	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes_c20127	histone H3 acetylation	cell organization and biogenesis	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes_c20127	"transcription, DNA-dependent"	RNA metabolism	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes2_c1482	"transcription, DNA-dependent"	RNA metabolism	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes2_c1482	histone H3 acetylation	protein metabolism	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes2_c1482	histone H3 acetylation	cell organization and biogenesis	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes_c20127	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes_c1574	"transcription, DNA-dependent"	RNA metabolism	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes_c20127	histone H3 acetylation	protein metabolism	P	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)
ruditapes_s36888	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_c9736	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_s37622	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc35162	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes2_c1718	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_s38013	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes2_c928	rRNA processing	RNA metabolism	P	Nuclear nucleic acid-binding protein C1D
ruditapes_c21381	ceramide metabolic process	other metabolic processes	P	ORM1-like protein 3
ruditapes_c12115	signal transduction	signal transduction	P	Fibrinogen C domain-containing protein 1-B
ruditapes_c25874	protein transport	transport	P	"Mitochondrial import inner membrane translocase subunit Tim21 (TIM21-like protein, mitochondrial)"
ruditapes_c25874	transport	transport	P	"Mitochondrial import inner membrane translocase subunit Tim21 (TIM21-like protein, mitochondrial)"
ruditapes_c13600	cell cycle	cell cycle and proliferation	P	Autocrine proliferation repressor protein A (PhoPQ-activated pathogenicity-related protein)
ruditapes_c13600	cell growth	other biological processes	P	Autocrine proliferation repressor protein A (PhoPQ-activated pathogenicity-related protein)
ruditapes_c13600	negative regulation of cell proliferation	cell cycle and proliferation	P	Autocrine proliferation repressor protein A (PhoPQ-activated pathogenicity-related protein)
ruditapes_c13600	regulation of aggregate size involved in sorocarp development	stress response	P	Autocrine proliferation repressor protein A (PhoPQ-activated pathogenicity-related protein)
ruditapes_c13600	regulation of aggregate size involved in sorocarp development	developmental processes	P	Autocrine proliferation repressor protein A (PhoPQ-activated pathogenicity-related protein)
ruditapes_c13600	sporulation resulting in formation of a cellular spore	other biological processes	P	Autocrine proliferation repressor protein A (PhoPQ-activated pathogenicity-related protein)
ruditapes_c26066	ion transport	transport	P	Anoctamin-1 (Discovered on gastrointestinal stromal tumors protein 1) (Oral cancer overexpressed protein 2) (Transmembrane protein 16A) (Tumor-amplified and overexpressed sequence 2)
ruditapes_c26066	transport	transport	P	Anoctamin-1 (Discovered on gastrointestinal stromal tumors protein 1) (Oral cancer overexpressed protein 2) (Transmembrane protein 16A) (Tumor-amplified and overexpressed sequence 2)
ruditapes_c26066	multicellular organismal development	developmental processes	P	Anoctamin-1 (Discovered on gastrointestinal stromal tumors protein 1) (Oral cancer overexpressed protein 2) (Transmembrane protein 16A) (Tumor-amplified and overexpressed sequence 2)
ruditapes_c26066	chloride transport	transport	P	Anoctamin-1 (Discovered on gastrointestinal stromal tumors protein 1) (Oral cancer overexpressed protein 2) (Transmembrane protein 16A) (Tumor-amplified and overexpressed sequence 2)
ruditapes_c26066	trachea development	developmental processes	P	Anoctamin-1 (Discovered on gastrointestinal stromal tumors protein 1) (Oral cancer overexpressed protein 2) (Transmembrane protein 16A) (Tumor-amplified and overexpressed sequence 2)
ruditapes_c26066	transmembrane ion transport	transport	P	Anoctamin-1 (Discovered on gastrointestinal stromal tumors protein 1) (Oral cancer overexpressed protein 2) (Transmembrane protein 16A) (Tumor-amplified and overexpressed sequence 2)
ruditapes_c30338	DNA repair	stress response	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c30338	DNA repair	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c30338	cell cycle	cell cycle and proliferation	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c30338	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c30338	mismatch repair	stress response	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_c30338	mismatch repair	DNA metabolism	P	DNA mismatch repair protein Msh2 (MutS protein homolog 2)
ruditapes_s39200	multicellular organismal development	developmental processes	P	"Sprouty-related, EVH1 domain-containing protein 2 (Spred-2)"
ruditapes_s39200	regulation of signal transduction	signal transduction	P	"Sprouty-related, EVH1 domain-containing protein 2 (Spred-2)"
ruditapes_c22611	transport	transport	P	"Probable electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes_c22611	electron transport chain	other metabolic processes	P	"Probable electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes_c30492	pathogenesis	other biological processes	P	Beta/delta-agatoxin-4 (Mu-2Aaga
ruditapes_c18524	multicellular organismal development	developmental processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	nervous system development	developmental processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	negative regulation of signal transduction	signal transduction	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	phosphorylation	other metabolic processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	negative regulation of NFAT protein import into nucleus	transport	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	cell differentiation	other biological processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	Wnt receptor signaling pathway	signal transduction	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	carbohydrate metabolic process	other metabolic processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	protein amino acid phosphorylation	protein metabolism	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	glycogen metabolic process	other metabolic processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	regulation of microtubule-based process	other biological processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	epithelial to mesenchymal transition	developmental processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c18524	epithelial to mesenchymal transition	cell organization and biogenesis	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
ruditapes_c15502	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c15502	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c17068	DNA topological change	DNA metabolism	P	"DNA gyrase subunit B, chloroplastic/mitochondrial (EC 5.99.1.3)"
ruditapes_c9805	cellulose catabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Endo-1,4-beta-glucanase A)"
ruditapes_c9805	metabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Endo-1,4-beta-glucanase A)"
ruditapes_c9805	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Endo-1,4-beta-glucanase A)"
ruditapes_c9805	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase A (EC 3.2.1.4) (Endo-1,4-beta-glucanase A)"
ruditapes_c10194	ATP catabolic process	other metabolic processes	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_c10194	modification-dependent protein catabolic process	protein metabolism	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_c10194	proteasomal protein catabolic process	protein metabolism	P	Proteasome-associated ATPase (AAA ATPase forming ring-shaped complexes) (ARC) (Proteasomal ATPase)
ruditapes_c25737	transport	transport	P	Hemin import ATP-binding protein HmuV (EC 3.6.3.-)
ruditapes_c25737	ATP catabolic process	other metabolic processes	P	Hemin import ATP-binding protein HmuV (EC 3.6.3.-)
ruditapes_c3340	branched chain family amino acid biosynthetic process	other metabolic processes	P	Dihydroxy-acid dehydratase 2 (DAD 2) (EC 4.2.1.9)
ruditapes_c3340	metabolic process	other metabolic processes	P	Dihydroxy-acid dehydratase 2 (DAD 2) (EC 4.2.1.9)
ruditapes_c3340	cellular amino acid biosynthetic process	other metabolic processes	P	Dihydroxy-acid dehydratase 2 (DAD 2) (EC 4.2.1.9)
ruditapes_s36061	transport	transport	P	Probable cytochrome c oxidase subunit 1-beta (EC 1.9.3.1) (Cytochrome aa3 subunit 1-beta) (Cytochrome c oxidase polypeptide I-beta)
ruditapes_s36061	aerobic respiration	other metabolic processes	P	Probable cytochrome c oxidase subunit 1-beta (EC 1.9.3.1) (Cytochrome aa3 subunit 1-beta) (Cytochrome c oxidase polypeptide I-beta)
ruditapes_s36061	oxidation reduction	other metabolic processes	P	Probable cytochrome c oxidase subunit 1-beta (EC 1.9.3.1) (Cytochrome aa3 subunit 1-beta) (Cytochrome c oxidase polypeptide I-beta)
ruditapes_s36061	electron transport chain	other metabolic processes	P	Probable cytochrome c oxidase subunit 1-beta (EC 1.9.3.1) (Cytochrome aa3 subunit 1-beta) (Cytochrome c oxidase polypeptide I-beta)
ruditapes_c22956	RNA metabolic process	RNA metabolism	P	Zinc finger CCCH domain-containing protein 43 (OsC3H43)
ruditapes_lrc35590	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc35590	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc19292	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc35590	DNA repair	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc35590	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc19292	DNA repair	stress response	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc19292	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc19292	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc19292	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes_lrc35590	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ATR (EC 2.7.11.1)
ruditapes2_c1222	rRNA processing	RNA metabolism	P	Nuclear nucleic acid-binding protein C1D
ruditapes_c20546	peptidyl-diphthamide biosynthetic process from peptidyl-histidine	protein metabolism	P	Diphthamide biosynthesis protein 1 (DPH1 homolog)
ruditapes2_c285	L-ascorbic acid biosynthetic process	other metabolic processes	P	"Hydroxyacylglutathione hydrolase, mitochondrial (EC 3.1.2.6) (Glyoxalase II) (Glx II)"
ruditapes2_c681	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein D-like (hnRNP D-like) (hnRNP DL)
ruditapes2_c681	"transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein D-like (hnRNP D-like) (hnRNP DL)
ruditapes_c7248	intracellular protein transport	transport	P	Coatomer subunit beta (Beta-coat protein) (Beta-COP)
ruditapes_c7248	transport	transport	P	Coatomer subunit beta (Beta-coat protein) (Beta-COP)
ruditapes_c7248	protein transport	transport	P	Coatomer subunit beta (Beta-coat protein) (Beta-COP)
ruditapes_c7248	vesicle-mediated transport	transport	P	Coatomer subunit beta (Beta-coat protein) (Beta-COP)
ruditapes_c15300	RNA splicing	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c15300	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c15300	mRNA processing	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c23229	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase MIB2 (EC 6.3.2.-) (Mind bomb homolog 2)
ruditapes_c23229	Notch signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase MIB2 (EC 6.3.2.-) (Mind bomb homolog 2)
ruditapes2_c2660	"retrograde vesicle-mediated transport, Golgi to ER"	transport	P	Coatomer subunit epsilon (Epsilon-coat protein) (Epsilon-COP)
ruditapes2_c2660	transport	transport	P	Coatomer subunit epsilon (Epsilon-coat protein) (Epsilon-COP)
ruditapes2_c2660	vesicle-mediated transport	transport	P	Coatomer subunit epsilon (Epsilon-coat protein) (Epsilon-COP)
ruditapes2_c2660	protein transport	transport	P	Coatomer subunit epsilon (Epsilon-coat protein) (Epsilon-COP)
ruditapes_c18754	signal transduction	signal transduction	P	Endophilin-B1 (SH3 domain-containing GRB2-like protein B1)
ruditapes_c18754	filopodium assembly	cell organization and biogenesis	P	Endophilin-B1 (SH3 domain-containing GRB2-like protein B1)
ruditapes_c18754	apoptosis	death	P	Endophilin-B1 (SH3 domain-containing GRB2-like protein B1)
ruditapes_c31747	proteolysis	protein metabolism	P	Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related protein 4 homolog A)
ruditapes_c31747	autophagy	other metabolic processes	P	Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related protein 4 homolog A)
ruditapes_c31747	protein transport	transport	P	Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related protein 4 homolog A)
ruditapes_c31747	transport	transport	P	Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related protein 4 homolog A)
ruditapes_c8658	translational initiation	protein metabolism	P	Density-regulated protein (DRP)
ruditapes_lrc39275	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_lrc39275	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc25992	rRNA processing	RNA metabolism	P	60S ribosomal protein L7
ruditapes_lrc39275	rRNA processing	RNA metabolism	P	60S ribosomal protein L7
ruditapes_lrc25992	ribosomal large subunit biogenesis	other biological processes	P	60S ribosomal protein L7
ruditapes_lrc25992	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_c34327	"regulation of transcription, DNA-dependent"	RNA metabolism	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B)
ruditapes_c34327	"transcription, DNA-dependent"	RNA metabolism	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B)
ruditapes_c34327	positive regulation of transcription factor activity	RNA metabolism	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B)
ruditapes_c34327	adipose tissue development	developmental processes	P	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B)
ruditapes_c11678	signal transduction	signal transduction	P	Endophilin-B2 (SH3 domain-containing GRB2-like protein B2)
ruditapes_c11678	filopodium assembly	cell organization and biogenesis	P	Endophilin-B2 (SH3 domain-containing GRB2-like protein B2)
ruditapes2_c2031	metabolic process	other metabolic processes	P	Peroxiredoxin-6 (EC 1.11.1.15)
ruditapes2_c2031	oxidation reduction	other metabolic processes	P	Peroxiredoxin-6 (EC 1.11.1.15)
ruditapes2_c2031	lipid catabolic process	other metabolic processes	P	Peroxiredoxin-6 (EC 1.11.1.15)
ruditapes_c13715	small GTPase mediated signal transduction	signal transduction	P	Ras-specific guanine nucleotide-releasing factor RalGPS1 (Ral GEF with PH domain and SH3-binding motif 1) (RalA exchange factor RalGPS1)
ruditapes_c23821	transport	transport	P	THO complex subunit 5 homolog
ruditapes_c23821	mRNA processing	RNA metabolism	P	THO complex subunit 5 homolog
ruditapes_c23821	RNA splicing	RNA metabolism	P	THO complex subunit 5 homolog
ruditapes_c23821	mRNA transport	transport	P	THO complex subunit 5 homolog
ruditapes_c23821	cell differentiation	other biological processes	P	THO complex subunit 5 homolog
ruditapes_c21442	"RNA interference, siRNA loading onto RISC"	other metabolic processes	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c21442	"RNA interference, siRNA loading onto RISC"	cell organization and biogenesis	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c21442	"tRNA splicing, via endonucleolytic cleavage and ligation"	RNA metabolism	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c21442	tRNA processing	RNA metabolism	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c21442	"RNA interference, targeting of mRNA for destruction"	other metabolic processes	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c21442	"RNA interference, targeting of mRNA for destruction"	cell organization and biogenesis	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c21442	phosphorylation	other metabolic processes	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c21442	mRNA processing	RNA metabolism	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c26772	mitochondrial mRNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26772	DNA recombination	DNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26772	positive regulation of cell growth	other biological processes	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c10558	DNA duplex unwinding	DNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26772	RNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c10558	RNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26772	DNA duplex unwinding	DNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c10558	positive regulation of mitochondrial RNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c10558	mitochondrial mRNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c10558	DNA recombination	DNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26772	mitochondrial RNA 3'-end processing	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c10558	mitochondrion morphogenesis	cell organization and biogenesis	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26772	anti-apoptosis	death	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c10558	mitochondrial RNA 3'-end processing	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26772	positive regulation of mitochondrial RNA catabolic process	RNA metabolism	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c10558	positive regulation of cell growth	other biological processes	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c26772	mitochondrion morphogenesis	cell organization and biogenesis	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c10558	anti-apoptosis	death	P	"ATP-dependent RNA helicase SUPV3L1, mitochondrial (EC 3.6.4.13) (Suppressor of var1 3-like protein 1) (SUV3-like protein 1)"
ruditapes_c18786	transport	transport	P	Monocarboxylate transporter 9 (MCT 9) (Solute carrier family 16 member 9)
ruditapes_c18786	transmembrane transport	transport	P	Monocarboxylate transporter 9 (MCT 9) (Solute carrier family 16 member 9)
ruditapes_c28369	response to DNA damage stimulus	stress response	P	Structural maintenance of chromosomes protein 5 (SMC protein 5) (SMC-5)
ruditapes_c28369	DNA repair	DNA metabolism	P	Structural maintenance of chromosomes protein 5 (SMC protein 5) (SMC-5)
ruditapes_c28369	DNA recombination	DNA metabolism	P	Structural maintenance of chromosomes protein 5 (SMC protein 5) (SMC-5)
ruditapes_c28369	DNA repair	stress response	P	Structural maintenance of chromosomes protein 5 (SMC protein 5) (SMC-5)
ruditapes_c17186	cristae formation	cell organization and biogenesis	P	"LETM1 and EF-hand domain-containing protein 1, mitochondrial (Leucine zipper-EF-hand-containing transmembrane protein 1)"
ruditapes2_c3131	"transcription, DNA-dependent"	RNA metabolism	P	Activated RNA polymerase II transcriptional coactivator p15 (SUB1 homolog)
ruditapes2_c626	"transcription, DNA-dependent"	RNA metabolism	P	Activated RNA polymerase II transcriptional coactivator p15 (SUB1 homolog)
ruditapes2_c3131	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Activated RNA polymerase II transcriptional coactivator p15 (SUB1 homolog)
ruditapes2_c626	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Activated RNA polymerase II transcriptional coactivator p15 (SUB1 homolog)
ruditapes_c1366	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit J (eIF3j) (Eukaryotic translation initiation factor 3 subunit 1) (eIF-3-alpha) (eIF3 p35)
ruditapes_c1366	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit J (eIF3j) (Eukaryotic translation initiation factor 3 subunit 1) (eIF-3-alpha) (eIF3 p35)
ruditapes2_c599	carbohydrate metabolic process	other metabolic processes	P	N-acetylneuraminate lyase (NALase) (EC 4.1.3.3) (N-acetylneuraminate pyruvate-lyase) (N-acetylneuraminic acid aldolase) (Sialate lyase) (Sialate-pyruvate lyase) (Sialic acid aldolase) (Sialic acid lyase)
ruditapes2_c599	metabolic process	other metabolic processes	P	N-acetylneuraminate lyase (NALase) (EC 4.1.3.3) (N-acetylneuraminate pyruvate-lyase) (N-acetylneuraminic acid aldolase) (Sialate lyase) (Sialate-pyruvate lyase) (Sialic acid aldolase) (Sialic acid lyase)
ruditapes_c25448	negative regulation of apoptosis	death	P	Kelch-like protein 20
ruditapes_c25448	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Kelch-like protein 20
ruditapes_c25448	protein ubiquitination	protein metabolism	P	Kelch-like protein 20
ruditapes_c10444	oxidation reduction	other metabolic processes	P	Protein odr-4 homolog
ruditapes_c17341	spermatogenesis	other biological processes	P	Outer dense fiber protein 2 (Cenexin) (Outer dense fiber of sperm tails protein 2)
ruditapes_c17341	cell differentiation	other biological processes	P	Outer dense fiber protein 2 (Cenexin) (Outer dense fiber of sperm tails protein 2)
ruditapes_c17341	multicellular organismal development	developmental processes	P	Outer dense fiber protein 2 (Cenexin) (Outer dense fiber of sperm tails protein 2)
ruditapes_c11895	RNA methylation	RNA metabolism	P	pre-rRNA processing protein FTSJ3 (EC 2.1.1.-) (2'-O-ribose RNA methyltransferase SPB1 homolog) (Protein ftsJ homolog 3) (Putative rRNA methyltransferase 3)
ruditapes_c11895	rRNA processing	RNA metabolism	P	pre-rRNA processing protein FTSJ3 (EC 2.1.1.-) (2'-O-ribose RNA methyltransferase SPB1 homolog) (Protein ftsJ homolog 3) (Putative rRNA methyltransferase 3)
ruditapes_c11895	methylation	other metabolic processes	P	pre-rRNA processing protein FTSJ3 (EC 2.1.1.-) (2'-O-ribose RNA methyltransferase SPB1 homolog) (Protein ftsJ homolog 3) (Putative rRNA methyltransferase 3)
ruditapes_c31673	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative homeodomain transcription factor 2
ruditapes_c31673	"transcription, DNA-dependent"	RNA metabolism	P	Putative homeodomain transcription factor 2
ruditapes_lrc25458	vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 2
ruditapes_lrc25458	transport	transport	P	Trafficking protein particle complex subunit 2
ruditapes_lrc25458	ER to Golgi vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 2
ruditapes_c21135	cell division	other biological processes	P	ADP-ribosylation factor-like protein 8A
ruditapes_c21135	mitosis	cell cycle and proliferation	P	ADP-ribosylation factor-like protein 8A
ruditapes_c21135	mitosis	cell organization and biogenesis	P	ADP-ribosylation factor-like protein 8A
ruditapes_c21135	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor-like protein 8A
ruditapes_c21135	chromosome segregation	other biological processes	P	ADP-ribosylation factor-like protein 8A
ruditapes_c21135	cell cycle	cell cycle and proliferation	P	ADP-ribosylation factor-like protein 8A
ruditapes_c9243	response to starvation	stress response	P	WD repeat domain phosphoinositide-interacting protein 3 (WIPI-3) (WD repeat-containing protein 45B)
ruditapes_c9243	autophagy	other metabolic processes	P	WD repeat domain phosphoinositide-interacting protein 3 (WIPI-3) (WD repeat-containing protein 45B)
ruditapes_c15700	signal transduction	signal transduction	P	DEP domain-containing protein 1B
ruditapes_c15700	positive regulation of GTPase activity	other biological processes	P	DEP domain-containing protein 1B
ruditapes_c11006	mRNA transport	transport	P	NTF2-related export protein 2
ruditapes_c11006	transport	transport	P	NTF2-related export protein 2
ruditapes_c11006	protein transport	transport	P	NTF2-related export protein 2
ruditapes2_c2286	apoptosis	death	P	Methylthioribulose-1-phosphate dehydratase (MTRu-1-P dehydratase) (EC 4.2.1.109) (APAF1-interacting protein homolog)
ruditapes2_c2286	methionine biosynthetic process	other metabolic processes	P	Methylthioribulose-1-phosphate dehydratase (MTRu-1-P dehydratase) (EC 4.2.1.109) (APAF1-interacting protein homolog)
ruditapes2_c2286	cellular amino acid biosynthetic process	other metabolic processes	P	Methylthioribulose-1-phosphate dehydratase (MTRu-1-P dehydratase) (EC 4.2.1.109) (APAF1-interacting protein homolog)
ruditapes2_lrc1969	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 subunit alpha) (eIF-2-alpha) (eIF-2A) (eIF-2alpha)
ruditapes2_lrc1969	protein amino acid autophosphorylation	protein metabolism	P	Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 subunit alpha) (eIF-2-alpha) (eIF-2A) (eIF-2alpha)
ruditapes2_lrc1969	regulation of translational initiation in response to stress	stress response	P	Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 subunit alpha) (eIF-2-alpha) (eIF-2A) (eIF-2alpha)
ruditapes2_lrc1969	regulation of translational initiation in response to stress	protein metabolism	P	Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 subunit alpha) (eIF-2-alpha) (eIF-2A) (eIF-2alpha)
ruditapes2_lrc1969	translation	protein metabolism	P	Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 subunit alpha) (eIF-2-alpha) (eIF-2A) (eIF-2alpha)
ruditapes2_lrc1969	regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 subunit alpha) (eIF-2-alpha) (eIF-2A) (eIF-2alpha)
ruditapes_c6919	mitochondrion transport along microtubule	transport	P	Mitochondrial Rho GTPase 1 (MIRO-1) (EC 3.6.5.-) (Ras homolog gene family member T1)
ruditapes_c6919	GTP catabolic process	other metabolic processes	P	Mitochondrial Rho GTPase 1 (MIRO-1) (EC 3.6.5.-) (Ras homolog gene family member T1)
ruditapes_c6919	small GTPase mediated signal transduction	signal transduction	P	Mitochondrial Rho GTPase 1 (MIRO-1) (EC 3.6.5.-) (Ras homolog gene family member T1)
ruditapes_c6919	cellular homeostasis	other biological processes	P	Mitochondrial Rho GTPase 1 (MIRO-1) (EC 3.6.5.-) (Ras homolog gene family member T1)
ruditapes_c6919	apoptosis	death	P	Mitochondrial Rho GTPase 1 (MIRO-1) (EC 3.6.5.-) (Ras homolog gene family member T1)
ruditapes2_c1561	"transcription, DNA-dependent"	RNA metabolism	P	Endothelial differentiation-related factor 1 homolog (EDF-1)
ruditapes2_c1561	positive regulation of DNA binding	other biological processes	P	Endothelial differentiation-related factor 1 homolog (EDF-1)
ruditapes2_c1561	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Endothelial differentiation-related factor 1 homolog (EDF-1)
ruditapes_c18000	protein ubiquitination	protein metabolism	P	"WD repeat, SAM and U-box domain-containing protein 1"
ruditapes2_c375	nucleosome assembly	cell organization and biogenesis	P	Histone H2A.Z (H2A/z)
ruditapes_c25179	melanin biosynthetic process	other metabolic processes	P	D-dopachrome decarboxylase (EC 4.1.1.84) (D-dopachrome tautomerase)
ruditapes_lrc34281	melanin biosynthetic process	other metabolic processes	P	D-dopachrome decarboxylase (EC 4.1.1.84) (D-dopachrome tautomerase)
ruditapes_lrc38549	melanin biosynthetic process	other metabolic processes	P	D-dopachrome decarboxylase (EC 4.1.1.84) (D-dopachrome tautomerase)
ruditapes_lrc34290	melanin biosynthetic process	other metabolic processes	P	D-dopachrome decarboxylase (EC 4.1.1.84) (D-dopachrome tautomerase)
ruditapes_lrc33720	melanin biosynthetic process	other metabolic processes	P	D-dopachrome decarboxylase (EC 4.1.1.84) (D-dopachrome tautomerase)
ruditapes_lrc35983	melanin biosynthetic process	other metabolic processes	P	D-dopachrome decarboxylase (EC 4.1.1.84) (D-dopachrome tautomerase)
ruditapes_c13431	protein import into nucleus	transport	P	Importin subunit alpha-1 (Karyopherin subunit alpha-1)
ruditapes_c13431	protein transport	transport	P	Importin subunit alpha-1 (Karyopherin subunit alpha-1)
ruditapes_c13431	transport	transport	P	Importin subunit alpha-1 (Karyopherin subunit alpha-1)
ruditapes_lrc33645	transport	transport	P	Lysosomal-associated transmembrane protein 4A
ruditapes_c8163	lipid catabolic process	other metabolic processes	P	Platelet-activating factor acetylhydrolase IB subunit beta (EC 3.1.1.47) (PAF acetylhydrolase 30 kDa subunit) (PAF-AH 30 kDa subunit) (PAF-AH subunit beta) (PAFAH subunit beta)
ruditapes_s37275	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear receptor coactivator 7
ruditapes_s37275	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear receptor coactivator 7
ruditapes_s37275	cell wall macromolecule catabolic process	other metabolic processes	P	Nuclear receptor coactivator 7
ruditapes_c10750	negative regulation of peptidase activity	other biological processes	P	Protease inhibitor NACI (Chymotrypsin inhibitor) (NACI)
ruditapes_lrc20704	metabolic process	other metabolic processes	P	Thiopurine S-methyltransferase (EC 2.1.1.67) (Thiopurine methyltransferase)
ruditapes_lrc20704	methylation	other metabolic processes	P	Thiopurine S-methyltransferase (EC 2.1.1.67) (Thiopurine methyltransferase)
ruditapes_c27189	phosphorylation	other metabolic processes	P	NAD(P)H-hydrate epimerase (EC 5.1.99.6) (NAD(P)HX epimerase)
ruditapes_c23542	cellular carbohydrate metabolic process	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes_c23542	tricarboxylic acid cycle	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes_c23542	carbohydrate metabolic process	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes_c23542	malate metabolic process	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes_c23542	oxidation reduction	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes_c24566	translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c24566	tRNA aminoacylation for protein translation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c24566	tRNA aminoacylation for protein translation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c24566	glutamyl-tRNA aminoacylation	protein metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c24566	glutamyl-tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes_c24566	tRNA aminoacylation	RNA metabolism	P	Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) (GluRS)
ruditapes2_lrc6075	transport	transport	P	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.-)
ruditapes2_lrc6075	ATP catabolic process	other metabolic processes	P	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.-)
ruditapes2_lrc6075	lipid transport	transport	P	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.-)
ruditapes2_lrc6075	transmembrane transport	transport	P	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.-)
ruditapes_c1781	nucleoside metabolic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c1781	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10)
ruditapes_c30351	xylan catabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase B (Xylanase B) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase B)"
ruditapes_c30351	metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase B (Xylanase B) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase B)"
ruditapes_c30351	carbohydrate metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase B (Xylanase B) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase B)"
ruditapes_c28789	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c28789	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c28789	proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c28789	transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c28789	ion transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c28789	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c7874	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized MCM-type protein MJECL13
ruditapes_c7874	"transcription, DNA-dependent"	RNA metabolism	P	Uncharacterized MCM-type protein MJECL13
ruditapes_c7874	cell cycle	cell cycle and proliferation	P	Uncharacterized MCM-type protein MJECL13
ruditapes_c7874	DNA replication	DNA metabolism	P	Uncharacterized MCM-type protein MJECL13
ruditapes_c2135	nucleoside metabolic process	other metabolic processes	P	Probable S-methyl-5'-thioinosine phosphorylase (EC 2.4.2.44) (5'-methylthioinosine phosphorylase) (MTI phosphorylase) (MTIP)
ruditapes_c2135	purine ribonucleoside salvage	other metabolic processes	P	Probable S-methyl-5'-thioinosine phosphorylase (EC 2.4.2.44) (5'-methylthioinosine phosphorylase) (MTI phosphorylase) (MTIP)
ruditapes_lrc38964	oxidation reduction	other metabolic processes	P	Uncharacterized protein MJ0066
ruditapes_lrc38964	metabolic process	other metabolic processes	P	Uncharacterized protein MJ0066
ruditapes_c14293	signal transduction	signal transduction	P	Guanine nucleotide-binding protein G(k) subunit alpha (G(i) alpha-3) (Fragment)
ruditapes_c14293	G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein G(k) subunit alpha (G(i) alpha-3) (Fragment)
ruditapes_c14293	cell division	other biological processes	P	Guanine nucleotide-binding protein G(k) subunit alpha (G(i) alpha-3) (Fragment)
ruditapes_c14293	cell cycle	cell cycle and proliferation	P	Guanine nucleotide-binding protein G(k) subunit alpha (G(i) alpha-3) (Fragment)
ruditapes2_c2958	cell differentiation	other biological processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of endothelial cell migration	other biological processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of angiogenesis	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of granule cell precursor proliferation	cell cycle and proliferation	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of granule cell precursor proliferation	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	angiogenesis	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	induction of an organ	cell-cell signaling	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of endothelial cell proliferation	cell cycle and proliferation	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	stem cell development	other biological processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	response to axon injury	stress response	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	negative regulation of cell proliferation	cell cycle and proliferation	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	glial cell differentiation	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	activation of MAPKK activity	signal transduction	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	activation of MAPKK activity	protein metabolism	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	multicellular organismal development	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of cell proliferation	cell cycle and proliferation	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	fibroblast growth factor receptor signaling pathway	signal transduction	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	induction of an organ	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	thyroid stimulating hormone secreting cell differentiation	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	lung development	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	negative regulation of cell death	death	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	mammary gland epithelial cell differentiation	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	regulation of cell cycle	cell cycle and proliferation	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of cell division	other biological processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	apoptosis	death	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of epithelial cell proliferation	cell cycle and proliferation	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of gene expression	other metabolic processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of cell differentiation	other biological processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	branching involved in ureteric bud morphogenesis	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	regulation of retinal cell programmed cell death	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	regulation of retinal cell programmed cell death	death	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	adrenocorticotropin hormone secreting cell differentiation	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	substantia nigra development	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes2_c2958	positive regulation of osteoblast differentiation	developmental processes	P	Fibroblast growth factor 2 (FGF-2) (Basic fibroblast growth factor) (bFGF) (Heparin-binding growth factor 2) (HBGF-2) (Prostatic growth factor) (Fragments)
ruditapes_c27739	multicellular organismal development	developmental processes	P	Semaphorin-5B (Semaphorin-G) (Sema G)
ruditapes2_c3047	cell differentiation	other biological processes	P	Semaphorin-5B (Semaphorin-G) (Sema G)
ruditapes_c27739	nervous system development	developmental processes	P	Semaphorin-5B (Semaphorin-G) (Sema G)
ruditapes2_c3047	nervous system development	developmental processes	P	Semaphorin-5B (Semaphorin-G) (Sema G)
ruditapes2_c3047	multicellular organismal development	developmental processes	P	Semaphorin-5B (Semaphorin-G) (Sema G)
ruditapes_c27739	cell differentiation	other biological processes	P	Semaphorin-5B (Semaphorin-G) (Sema G)
ruditapes_c26243	telomere formation via telomerase	DNA metabolism	P	Telomerase Cajal body protein 1 (Guanine nucleotide-binding protein beta 5) (WD repeat-containing protein 79) (WD40 repeat-containing protein encoded by RNA antisense to p53)
ruditapes_c26243	telomere formation via telomerase	cell organization and biogenesis	P	Telomerase Cajal body protein 1 (Guanine nucleotide-binding protein beta 5) (WD repeat-containing protein 79) (WD40 repeat-containing protein encoded by RNA antisense to p53)
ruditapes_c26243	positive regulation of telomerase activity	other biological processes	P	Telomerase Cajal body protein 1 (Guanine nucleotide-binding protein beta 5) (WD repeat-containing protein 79) (WD40 repeat-containing protein encoded by RNA antisense to p53)
ruditapes_s39739	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger E-box-binding homeobox 1 (Transcription factor 8) (TCF-8) (Zinc finger protein BZP)
ruditapes_s39739	cell differentiation	other biological processes	P	Zinc finger E-box-binding homeobox 1 (Transcription factor 8) (TCF-8) (Zinc finger protein BZP)
ruditapes_s39739	positive regulation of neuron differentiation	developmental processes	P	Zinc finger E-box-binding homeobox 1 (Transcription factor 8) (TCF-8) (Zinc finger protein BZP)
ruditapes_s39739	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger E-box-binding homeobox 1 (Transcription factor 8) (TCF-8) (Zinc finger protein BZP)
ruditapes_s39739	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger E-box-binding homeobox 1 (Transcription factor 8) (TCF-8) (Zinc finger protein BZP)
ruditapes_s39739	nervous system development	developmental processes	P	Zinc finger E-box-binding homeobox 1 (Transcription factor 8) (TCF-8) (Zinc finger protein BZP)
ruditapes_lrc19659	metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes_lrc19659	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes_lrc19659	xenobiotic metabolic process	other metabolic processes	P	Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi)
ruditapes_c20162	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c20162	DNA repair	stress response	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c20162	DNA repair	DNA metabolism	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c20162	response to DNA damage stimulus	stress response	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c20162	DNA recombination	DNA metabolism	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c20162	biological_process	other biological processes	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c2820	cellular amino acid metabolic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c2820	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c2820	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c19187	negative regulation of cell proliferation	cell cycle and proliferation	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c2009	negative regulation of cell proliferation	cell cycle and proliferation	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c2009	actin filament capping	protein metabolism	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c2009	actin filament capping	cell organization and biogenesis	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c2009	regulation of chondrocyte differentiation	developmental processes	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c19187	regulation of chondrocyte differentiation	developmental processes	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c19187	positive regulation of megakaryocyte differentiation	developmental processes	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c2009	positive regulation of megakaryocyte differentiation	developmental processes	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c19187	actin filament capping	protein metabolism	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c19187	actin filament capping	cell organization and biogenesis	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c19187	positive regulation of apoptosis	death	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c2009	actin filament severing	other biological processes	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c19187	actin filament severing	other biological processes	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c2009	positive regulation of apoptosis	death	P	Adseverin (Gelsolin-like protein) (Scinderin)
ruditapes_c18688	histone methylation	protein metabolism	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_c18688	histone methylation	cell organization and biogenesis	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_c18688	"CD4-positive, alpha beta T cell differentiation"	developmental processes	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_c18688	reflex	other biological processes	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_c18688	"CD8-positive, alpha-beta T cell differentiation"	developmental processes	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_c18688	T cell activation	other biological processes	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_c18688	"regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_c18688	chromatin modification	cell organization and biogenesis	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_c18688	"transcription, DNA-dependent"	RNA metabolism	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_c18688	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_c18688	activated T cell proliferation	cell cycle and proliferation	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_c18688	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	DNA-binding protein SATB1 (Special AT-rich sequence-binding protein 1)
ruditapes_lrc33247	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32417	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc35167	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32973	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1767	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc7254	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc7254	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1998	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c7224	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc34617	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32417	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33835	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32973	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c2543	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39344	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c3504	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc34617	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32590	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33835	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4599	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32590	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s38561	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc34617	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1767	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1767	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4599	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32417	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc7254	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39344	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s38561	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc39002	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1767	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c3504	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4189	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c3504	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s38561	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc5172	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32973	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32590	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c2543	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33203	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32973	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32590	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39722	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc35167	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c5962	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc7254	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33247	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c7224	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39344	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s35461	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32950	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32973	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33247	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc39002	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4326	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4189	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32973	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c5962	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32950	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4326	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33203	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39344	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc34617	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s35461	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc35167	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4599	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1767	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c7224	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33835	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33203	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4326	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c7224	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc7254	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc35167	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c5962	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32950	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1767	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39722	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1998	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s35461	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4599	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s38561	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c3504	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c7224	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc39002	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4326	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s35461	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s38561	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc5172	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39722	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc35167	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c3504	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39722	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33203	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc5172	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc35167	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39722	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1998	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s35461	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc5172	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32973	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32950	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33835	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc5172	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc39002	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32590	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4189	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c2543	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc7254	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33203	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s35461	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc7254	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1767	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33247	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33835	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33203	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c5962	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc39002	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32950	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4326	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32417	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc34617	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c5962	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39344	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33835	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32417	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c7224	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32417	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s38561	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc39002	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32950	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39344	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c7224	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc7254	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39344	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc39002	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39722	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4189	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc35167	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c2543	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1767	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32417	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4189	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c5962	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc5172	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39722	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4326	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32590	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s35461	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4599	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c2543	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc34617	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32590	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1767	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4599	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39344	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32417	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1998	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33203	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc34617	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4326	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c2543	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c2543	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4189	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc5172	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1998	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32973	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33247	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c3504	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32950	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc7254	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1998	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4189	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4326	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33203	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c3504	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc35167	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c5962	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32950	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33247	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc39002	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc35167	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c7224	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s35461	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c2543	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1998	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33247	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33835	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s38561	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32973	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c3504	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1998	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s38561	learning or memory	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc39002	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33247	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c5962	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c2543	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33835	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s35461	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s38561	positive regulation of catalytic activity	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc34617	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33835	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c7224	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc34617	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39344	neuromuscular process controlling balance	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c5962	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33247	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39722	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4599	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4189	oligosaccharide catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4189	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc5172	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4599	neurological system process	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32590	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32590	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_s39722	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c3504	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc5172	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32950	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc33203	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1998	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc32417	lipid storage	other biological processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4599	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_lrc4326	ganglioside catabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c31607	cell adhesion	cell adhesion	P	Killer cell lectin-like receptor 6 (Lymphocyte antigen 49f) (Ly-49f) (T-cell surface glycoprotein Ly-49F)
ruditapes_c27392	sperm motility	other biological processes	P	A-kinase anchor protein 4 (AKAP-4) (A-kinase anchor protein 82 kDa) (AKAP 82) (mAKAP82) (FSC1) (Major sperm fibrous sheath protein) (Protein kinase A-anchoring protein 4) (PRKA4) (p82)
ruditapes_c27392	cell projection organization	cell organization and biogenesis	P	A-kinase anchor protein 4 (AKAP-4) (A-kinase anchor protein 82 kDa) (AKAP 82) (mAKAP82) (FSC1) (Major sperm fibrous sheath protein) (Protein kinase A-anchoring protein 4) (PRKA4) (p82)
ruditapes_c27392	protein localization	other biological processes	P	A-kinase anchor protein 4 (AKAP-4) (A-kinase anchor protein 82 kDa) (AKAP 82) (mAKAP82) (FSC1) (Major sperm fibrous sheath protein) (Protein kinase A-anchoring protein 4) (PRKA4) (p82)
ruditapes_c27392	transmembrane receptor protein serine/threonine kinase signaling pathway	signal transduction	P	A-kinase anchor protein 4 (AKAP-4) (A-kinase anchor protein 82 kDa) (AKAP 82) (mAKAP82) (FSC1) (Major sperm fibrous sheath protein) (Protein kinase A-anchoring protein 4) (PRKA4) (p82)
ruditapes_c11168	blastocyst formation	developmental processes	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	negative regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	protein heterotrimerization	cell organization and biogenesis	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	cell cycle arrest	cell cycle and proliferation	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	protein homotrimerization	cell organization and biogenesis	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	skeletal muscle tissue development	developmental processes	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	negative regulation of cell differentiation	other biological processes	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	lymphocyte homeostasis	other biological processes	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	response to antibiotic	other biological processes	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	regulation of apoptosis	death	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	lens fiber cell differentiation	developmental processes	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	positive regulation of axonogenesis	developmental processes	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c11168	positive regulation of axonogenesis	cell organization and biogenesis	P	Ski-like protein (Ski-related oncogene) (Ski-related protein)
ruditapes_c3119	cell wall organization	cell organization and biogenesis	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c3119	carbohydrate metabolic process	other metabolic processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c3119	cell division	other biological processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c3119	metabolic process	other metabolic processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c3119	peptidoglycan biosynthetic process	other metabolic processes	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c3119	regulation of cell shape	cell organization and biogenesis	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c3119	cell cycle	cell cycle and proliferation	P	Beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c16576	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase kinase kinase 12 (EC 2.7.11.25) (Dual leucine zipper bearing kinase) (DLK) (Leucine-zipper protein kinase) (ZPK) (MAPK-upstream kinase) (MUK) (Mixed lineage kinase)
ruditapes_c16576	protein amino acid autophosphorylation	protein metabolism	P	Mitogen-activated protein kinase kinase kinase 12 (EC 2.7.11.25) (Dual leucine zipper bearing kinase) (DLK) (Leucine-zipper protein kinase) (ZPK) (MAPK-upstream kinase) (MUK) (Mixed lineage kinase)
ruditapes_c16576	peptidyl-serine phosphorylation	protein metabolism	P	Mitogen-activated protein kinase kinase kinase 12 (EC 2.7.11.25) (Dual leucine zipper bearing kinase) (DLK) (Leucine-zipper protein kinase) (ZPK) (MAPK-upstream kinase) (MUK) (Mixed lineage kinase)
ruditapes_c16576	histone phosphorylation	protein metabolism	P	Mitogen-activated protein kinase kinase kinase 12 (EC 2.7.11.25) (Dual leucine zipper bearing kinase) (DLK) (Leucine-zipper protein kinase) (ZPK) (MAPK-upstream kinase) (MUK) (Mixed lineage kinase)
ruditapes_c16576	histone phosphorylation	cell organization and biogenesis	P	Mitogen-activated protein kinase kinase kinase 12 (EC 2.7.11.25) (Dual leucine zipper bearing kinase) (DLK) (Leucine-zipper protein kinase) (ZPK) (MAPK-upstream kinase) (MUK) (Mixed lineage kinase)
ruditapes_c16576	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase kinase kinase 12 (EC 2.7.11.25) (Dual leucine zipper bearing kinase) (DLK) (Leucine-zipper protein kinase) (ZPK) (MAPK-upstream kinase) (MUK) (Mixed lineage kinase)
ruditapes_c16576	peptidyl-threonine phosphorylation	protein metabolism	P	Mitogen-activated protein kinase kinase kinase 12 (EC 2.7.11.25) (Dual leucine zipper bearing kinase) (DLK) (Leucine-zipper protein kinase) (ZPK) (MAPK-upstream kinase) (MUK) (Mixed lineage kinase)
ruditapes_c985	innate immune response	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-) (Interferon-gamma-inducible protein Mg11)
ruditapes_c985	metabolic process	other metabolic processes	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-) (Interferon-gamma-inducible protein Mg11)
ruditapes_c985	regulation of innate immune response	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-) (Interferon-gamma-inducible protein Mg11)
ruditapes_c985	defense response to virus	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-) (Interferon-gamma-inducible protein Mg11)
ruditapes2_c2809	binding of sperm to zona pellucida	other biological processes	P	Zona pellucida sperm-binding protein 3 receptor (Sperm fertilization protein 56) (sp56)
ruditapes2_c2809	single fertilization	other biological processes	P	Zona pellucida sperm-binding protein 3 receptor (Sperm fertilization protein 56) (sp56)
ruditapes2_c640	innate immune response	stress response	P	Macrophage receptor MARCO (Macrophage receptor with collagenous structure)
ruditapes_c4165	innate immune response	stress response	P	Macrophage receptor MARCO (Macrophage receptor with collagenous structure)
ruditapes_c8256	protein catabolic process	protein metabolism	P	ATP-dependent Clp protease adapter protein ClpS
ruditapes_c30158	regulation of cytokine production	other biological processes	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_c30158	regulation of proteolysis	protein metabolism	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_c30158	regulation of defense response to virus	stress response	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_c30158	signal transduction	signal transduction	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_c30158	regulation of apoptosis	death	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_c30158	tumor necrosis factor-mediated signaling pathway	signal transduction	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_c30158	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_c30158	apoptosis	death	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_c30158	protein ubiquitination	protein metabolism	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_c30158	regulation of interferon-beta production	other biological processes	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_c30158	toll-like receptor signaling pathway	signal transduction	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_c30158	toll-like receptor signaling pathway	stress response	P	TNF receptor-associated factor 3 (EC 6.3.2.-) (CD40 receptor-associated factor 1) (CRAF1) (TRAFAMN)
ruditapes_lrc32229	transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc32298	protein transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc38632	protein transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc32298	transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc38632	"transcription, DNA-dependent"	RNA metabolism	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes2_c3518	protein transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc32298	"transcription, DNA-dependent"	RNA metabolism	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc32229	protein transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes2_c3518	"transcription, DNA-dependent"	RNA metabolism	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc32229	"transcription, DNA-dependent"	RNA metabolism	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes2_c5835	transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc33959	transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc35640	transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes2_c5835	"transcription, DNA-dependent"	RNA metabolism	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc33959	"transcription, DNA-dependent"	RNA metabolism	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes2_c5835	protein transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc33959	protein transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc38632	transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc35640	"transcription, DNA-dependent"	RNA metabolism	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes2_c3518	transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_lrc35640	protein transport	transport	P	Nascent polypeptide-associated complex subunit alpha (Alpha-NAC) (Alpha-NAC/1.9.2)
ruditapes_c33242	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain
ruditapes_c15317	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain
ruditapes_c24375	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain
ruditapes_c13863	induction of necroptosis by extracellular signals	death	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	interspecies interaction between organisms	other biological processes	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	positive regulation of tumor necrosis factor production	other biological processes	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	signal transduction	signal transduction	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	response to tumor necrosis factor	other biological processes	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	induction of apoptosis	death	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	positive regulation of necrotic cell death	death	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	apoptosis	death	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	phosphorylation	other metabolic processes	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	protein amino acid phosphorylation	protein metabolism	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	positive regulation of interleukin-8 production	other biological processes	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c13863	protein amino acid autophosphorylation	protein metabolism	P	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1) (Serine/threonine-protein kinase RIP)
ruditapes_c10987	endocytosis	transport	P	Epidermal growth factor receptor substrate 15-like 1 (Epidermal growth factor receptor pathway substrate 15-related sequence) (Eps15-rs) (Eps15-related protein) (Eps15R)
ruditapes_c10987	endocytosis	cell organization and biogenesis	P	Epidermal growth factor receptor substrate 15-like 1 (Epidermal growth factor receptor pathway substrate 15-related sequence) (Eps15-rs) (Eps15-related protein) (Eps15R)
ruditapes_c9715	endocytosis	transport	P	Epidermal growth factor receptor substrate 15-like 1 (Epidermal growth factor receptor pathway substrate 15-related sequence) (Eps15-rs) (Eps15-related protein) (Eps15R)
ruditapes_c9715	endocytosis	cell organization and biogenesis	P	Epidermal growth factor receptor substrate 15-like 1 (Epidermal growth factor receptor pathway substrate 15-related sequence) (Eps15-rs) (Eps15-related protein) (Eps15R)
ruditapes_c9102	positive regulation of interleukin-23 production	other biological processes	P	Interleukin-17 receptor A (IL-17 receptor A) (IL-17RA) (CD antigen CD217)
ruditapes_c30170	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Jerky protein
ruditapes_c25318	negative regulation of apoptosis	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP homolog A) (Inhibitor of apoptosis protein 3) (IAP-3) (mIAP-3) (mIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_lrc39099	apoptosis	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP homolog A) (Inhibitor of apoptosis protein 3) (IAP-3) (mIAP-3) (mIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_lrc39099	negative regulation of caspase activity	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP homolog A) (Inhibitor of apoptosis protein 3) (IAP-3) (mIAP-3) (mIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_lrc39099	negative regulation of apoptosis	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP homolog A) (Inhibitor of apoptosis protein 3) (IAP-3) (mIAP-3) (mIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_c25318	anti-apoptosis	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP homolog A) (Inhibitor of apoptosis protein 3) (IAP-3) (mIAP-3) (mIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_c25318	negative regulation of caspase activity	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP homolog A) (Inhibitor of apoptosis protein 3) (IAP-3) (mIAP-3) (mIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_lrc39099	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP homolog A) (Inhibitor of apoptosis protein 3) (IAP-3) (mIAP-3) (mIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_c25318	apoptosis	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP homolog A) (Inhibitor of apoptosis protein 3) (IAP-3) (mIAP-3) (mIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_lrc39099	anti-apoptosis	death	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP homolog A) (Inhibitor of apoptosis protein 3) (IAP-3) (mIAP-3) (mIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_c25318	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase XIAP (EC 6.3.2.-) (Baculoviral IAP repeat-containing protein 4) (IAP homolog A) (Inhibitor of apoptosis protein 3) (IAP-3) (mIAP-3) (mIAP3) (X-linked inhibitor of apoptosis protein) (X-linked IAP)
ruditapes_c8470	positive regulation of fatty acid metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	positive regulation of signal transduction	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	positive regulation of interleukin-8 production	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	positive regulation of protein kinase A signaling cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of gluconeogenesis	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of cell migration	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of synaptic transmission	cell-cell signaling	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	positive regulation of protein amino acid phosphorylation	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of low-density lipoprotein receptor biosynthetic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of tumor necrosis factor-mediated signaling pathway	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	positive regulation of cholesterol efflux	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	positive regulation of cellular protein metabolic process	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	fatty acid oxidation	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	response to tumor necrosis factor	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	glucose homeostasis	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of gluconeogenesis	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of low-density lipoprotein receptor biosynthetic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	fatty acid oxidation	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	positive regulation of cellular protein metabolic process	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of phagocytosis	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of synaptic transmission	cell-cell signaling	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of fat cell differentiation	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of macrophage differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	response to tumor necrosis factor	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of fat cell differentiation	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	brown fat cell differentiation	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	fatty acid beta-oxidation	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	brown fat cell differentiation	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of phagocytosis	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	brown fat cell differentiation	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	positive regulation of protein amino acid phosphorylation	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	positive regulation of cholesterol efflux	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	glucose homeostasis	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	glucose homeostasis	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of cell migration	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of synaptic transmission	cell-cell signaling	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	fatty acid beta-oxidation	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of cell migration	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of phagocytosis	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of phagocytosis	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	positive regulation of cellular protein metabolic process	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	positive regulation of cholesterol efflux	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	response to tumor necrosis factor	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	positive regulation of protein amino acid phosphorylation	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of tumor necrosis factor-mediated signaling pathway	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	fatty acid oxidation	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of gluconeogenesis	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of tumor necrosis factor-mediated signaling pathway	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of fat cell differentiation	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of macrophage differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of low-density lipoprotein receptor biosynthetic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of phagocytosis	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of phagocytosis	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of platelet-derived growth factor receptor signaling pathway	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	positive regulation of myeloid cell apoptosis	death	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of foam cell differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of macrophage differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	protein homooligomerization	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	regulation of glucose metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	positive regulation of glucose import	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	positive regulation of protein kinase A signaling cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of granulocyte differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of granulocyte differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of blood pressure	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	positive regulation of interleukin-8 production	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	positive regulation of fatty acid metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	protein homooligomerization	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of smooth muscle cell migration	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of tumor necrosis factor production	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of inflammatory response	stress response	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	positive regulation of fatty acid metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of inflammatory response	stress response	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of protein amino acid autophosphorylation	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of tumor necrosis factor production	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	low-density lipoprotein particle clearance	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	response to glucose stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of platelet-derived growth factor receptor signaling pathway	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of heterotypic cell-cell adhesion	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of heterotypic cell-cell adhesion	cell adhesion	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	cellular response to insulin stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	low-density lipoprotein particle clearance	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	glucose metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of protein amino acid autophosphorylation	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	glucose metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of foam cell differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	cellular response to insulin stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	positive regulation of signal transduction	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of protein amino acid autophosphorylation	protein metabolism	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of smooth muscle cell migration	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of smooth muscle cell migration	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	protein homooligomerization	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of granulocyte differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	positive regulation of glucose import	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of MAP kinase activity	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of inflammatory response	stress response	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of heterotypic cell-cell adhesion	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of heterotypic cell-cell adhesion	cell adhesion	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of MAP kinase activity	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	response to glucose stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	cellular response to insulin stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of tumor necrosis factor production	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	positive regulation of protein kinase A signaling cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	response to glucose stimulus	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	low-density lipoprotein particle clearance	cell organization and biogenesis	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	fatty acid beta-oxidation	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	positive regulation of glucose import	transport	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of foam cell differentiation	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	glucose metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	regulation of glucose metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of MAP kinase activity	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of heterotypic cell-cell adhesion	developmental processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	negative regulation of heterotypic cell-cell adhesion	cell adhesion	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of blood pressure	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	positive regulation of signal transduction	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	negative regulation of blood pressure	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	positive regulation of myeloid cell apoptosis	death	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	negative regulation of platelet-derived growth factor receptor signaling pathway	signal transduction	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c16617	positive regulation of myeloid cell apoptosis	death	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14001	positive regulation of interleukin-8 production	other biological processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c8470	regulation of glucose metabolic process	other metabolic processes	P	"Adiponectin (30 kDa adipocyte complement-related protein) (Adipocyte complement-related 30 kDa protein) (ACRP30) (Adipocyte, C1q and collagen domain-containing protein) (Adipocyte-specific protein AdipoQ)"
ruditapes_c14195	cell differentiation	other biological processes	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c17412	blastocyst development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c17412	multicellular organismal development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c17412	positive regulation of epithelial cell differentiation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c14195	transport	transport	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c17412	protein transport	transport	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c17412	transport	transport	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c14195	blastocyst development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c14195	positive regulation of epithelial cell differentiation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c14195	multicellular organismal development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c17412	cell differentiation	other biological processes	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c14195	inner cell mass cell proliferation	cell cycle and proliferation	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c14195	inner cell mass cell proliferation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c14195	protein transport	transport	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c17412	inner cell mass cell proliferation	cell cycle and proliferation	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c17412	inner cell mass cell proliferation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Apactin) (CRP-ductin) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)
ruditapes_c9165	biological_process	other biological processes	P	Probable Fe(2+)-trafficking protein
ruditapes_c7627	DNA catabolic process	DNA metabolism	P	Exodeoxyribonuclease 7 small subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII small subunit) (Exonuclease VII small subunit)
ruditapes2_c1469	carbohydrate metabolic process	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes2_c1469	tricarboxylic acid cycle	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes2_c1469	cellular carbohydrate metabolic process	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes2_c1469	malate metabolic process	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes2_c1469	oxidation reduction	other metabolic processes	P	Malate dehydrogenase (EC 1.1.1.37)
ruditapes_c27357	biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes_c27357	coenzyme A biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes_c28815	proteolysis	protein metabolism	P	Dipeptidyl peptidase 1 (EC 3.4.14.1) (Cathepsin C) (Cathepsin J) (Dipeptidyl peptidase I) (DPP-I) (DPPI) (Dipeptidyl transferase) [Cleaved into: Dipeptidyl peptidase 1 exclusion domain chain (Dipeptidyl peptidase I exclusion domain chain); Dipeptidyl peptidase 1 heavy chain (Dipeptidyl peptidase I heavy chain); Dipeptidyl peptidase 1 light chain (Dipeptidyl peptidase I light chain)]
ruditapes_c18248	cell differentiation	other biological processes	P	Kinesin-like protein vab-8 (Variable abnormal morphology protein 8)
ruditapes_c18248	multicellular organismal development	developmental processes	P	Kinesin-like protein vab-8 (Variable abnormal morphology protein 8)
ruditapes_c18248	nervous system development	developmental processes	P	Kinesin-like protein vab-8 (Variable abnormal morphology protein 8)
ruditapes_c18248	microtubule-based movement	other biological processes	P	Kinesin-like protein vab-8 (Variable abnormal morphology protein 8)
ruditapes_c12846	multicellular organismal development	developmental processes	P	Semaphorin-2A (Sema-2a) (Male abnormal protein 20)
ruditapes_c29143	oxidation reduction	other metabolic processes	P	Cysteine dioxygenase (CDO) (EC 1.13.11.20)
ruditapes_c29143	L-cysteine metabolic process	other metabolic processes	P	Cysteine dioxygenase (CDO) (EC 1.13.11.20)
ruditapes_c7818	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 23 (Mediator complex subunit 23) (Mediator complex subunit sur-2)
ruditapes_c7818	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 23 (Mediator complex subunit 23) (Mediator complex subunit sur-2)
ruditapes_c17052	signal transduction	signal transduction	P	Guanine nucleotide-binding protein alpha-3 subunit
ruditapes_c17052	G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein alpha-3 subunit
ruditapes_c6434	methylation	other metabolic processes	P	Probable leucine carboxyl methyltransferase 1 (EC 2.1.1.233) ([Phosphatase 2A protein]-leucine-carboxy methyltransferase 1)
ruditapes_lrc31377	substrate adhesion-dependent cell spreading	cell adhesion	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	substrate adhesion-dependent cell spreading	cell organization and biogenesis	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	odontogenesis of dentine-containing tooth	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	regulation of cell adhesion	cell adhesion	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	cell adhesion	cell adhesion	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	muscle organ development	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	neural crest cell migration	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	regulation of embryonic development	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	branching involved in salivary gland morphogenesis	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	regulation of cell migration	other biological processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	branching morphogenesis of a tube	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	hair follicle development	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	organ morphogenesis	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	cell migration	other biological processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	lung development	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	integrin-mediated signaling pathway	signal transduction	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	regulation of cell proliferation	cell cycle and proliferation	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	cilium assembly	cell organization and biogenesis	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	morphogenesis of embryonic epithelium	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	morphogenesis of a polarized epithelium	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_lrc31377	branching involved in ureteric bud morphogenesis	developmental processes	P	Laminin subunit alpha-5 (Laminin-10 subunit alpha) (Laminin-11 subunit alpha) (Laminin-15 subunit alpha)
ruditapes_c18168	transmembrane transport	transport	P	"ATP-binding cassette sub-family B member 7, mitochondrial (ATP-binding cassette transporter 7) (ABC transporter 7 protein)"
ruditapes_c18168	cellular iron ion homeostasis	other biological processes	P	"ATP-binding cassette sub-family B member 7, mitochondrial (ATP-binding cassette transporter 7) (ABC transporter 7 protein)"
ruditapes_c18168	transport	transport	P	"ATP-binding cassette sub-family B member 7, mitochondrial (ATP-binding cassette transporter 7) (ABC transporter 7 protein)"
ruditapes_c18168	ATP catabolic process	other metabolic processes	P	"ATP-binding cassette sub-family B member 7, mitochondrial (ATP-binding cassette transporter 7) (ABC transporter 7 protein)"
ruditapes_c29980	signal transduction	signal transduction	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	hindlimb morphogenesis	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	regulation of smoothened signaling pathway	signal transduction	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	smoothened signaling pathway	signal transduction	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	negative regulation of cell proliferation	cell cycle and proliferation	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	regulation of cell proliferation	cell cycle and proliferation	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	dorsal/ventral pattern formation	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	protein processing	protein metabolism	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	keratinocyte proliferation	cell cycle and proliferation	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	neural tube formation	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	mammary gland duct morphogenesis	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	pattern specification process	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	regulation of protein localization	other biological processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	heart morphogenesis	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	neural tube closure	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	epidermis development	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	mammary gland epithelial cell differentiation	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	mammary gland development	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	negative regulation of smoothened signaling pathway	signal transduction	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	response to chlorate	other biological processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	negative regulation of multicellular organism growth	other biological processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	negative regulation of epithelial cell proliferation	cell cycle and proliferation	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	brain development	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	regulation of mitotic cell cycle	cell cycle and proliferation	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	organ morphogenesis	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	regulation of growth	other biological processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	neural plate pattern formation	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	branching involved in ureteric bud morphogenesis	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	embryonic limb morphogenesis	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	negative regulation of cell division	other biological processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	dorsal/ventral neural tube patterning	developmental processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c29980	glucose homeostasis	other biological processes	P	Protein patched homolog 1 (PTC) (PTC1)
ruditapes_c14724	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 235 (Zinc finger protein 93) (Zfp-93)
ruditapes_c14724	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 235 (Zinc finger protein 93) (Zfp-93)
ruditapes_c26735	elevation of cytosolic calcium ion concentration	other biological processes	P	Short transient receptor potential channel 6 (TrpC6) (Calcium entry channel) (Transient receptor protein 6) (TRP-6)
ruditapes_c26735	positive regulation of ion transmembrane transporter activity	transport	P	Short transient receptor potential channel 6 (TrpC6) (Calcium entry channel) (Transient receptor protein 6) (TRP-6)
ruditapes_c26735	transport	transport	P	Short transient receptor potential channel 6 (TrpC6) (Calcium entry channel) (Transient receptor protein 6) (TRP-6)
ruditapes_c26735	calcium ion transport	transport	P	Short transient receptor potential channel 6 (TrpC6) (Calcium entry channel) (Transient receptor protein 6) (TRP-6)
ruditapes_c26735	positive regulation of calcium ion transport via store-operated calcium channel activity	transport	P	Short transient receptor potential channel 6 (TrpC6) (Calcium entry channel) (Transient receptor protein 6) (TRP-6)
ruditapes_c26735	ion transport	transport	P	Short transient receptor potential channel 6 (TrpC6) (Calcium entry channel) (Transient receptor protein 6) (TRP-6)
ruditapes_c26735	transmembrane calcium ion transport	transport	P	Short transient receptor potential channel 6 (TrpC6) (Calcium entry channel) (Transient receptor protein 6) (TRP-6)
ruditapes_c26735	transmembrane transport	transport	P	Short transient receptor potential channel 6 (TrpC6) (Calcium entry channel) (Transient receptor protein 6) (TRP-6)
ruditapes_c11447	positive regulation of interleukin-8 production	other biological processes	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	positive regulation of apoptosis	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	defense response to virus	stress response	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	apoptosis	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	signal transduction	signal transduction	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	necrotic cell death	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	induction of apoptosis by extracellular signals	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	positive regulation of type I interferon-mediated signaling pathway	signal transduction	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	innate immune response	stress response	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	regulation of apoptosis	death	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c11447	positive regulation of tumor necrosis factor production	other biological processes	P	Protein FADD (FAS-associated death domain protein) (FAS-associating death domain-containing protein) (Mediator of receptor induced toxicity)
ruditapes_c19976	cell communication	other biological processes	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Cpk-m) (Phosphoinositide 3-kinase-C2-alpha) (p170)
ruditapes_c19976	endocytosis	transport	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Cpk-m) (Phosphoinositide 3-kinase-C2-alpha) (p170)
ruditapes_c19976	endocytosis	cell organization and biogenesis	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Cpk-m) (Phosphoinositide 3-kinase-C2-alpha) (p170)
ruditapes_c19976	phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Cpk-m) (Phosphoinositide 3-kinase-C2-alpha) (p170)
ruditapes_c19976	exocytosis	transport	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Cpk-m) (Phosphoinositide 3-kinase-C2-alpha) (p170)
ruditapes_c19976	phosphoinositide phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Cpk-m) (Phosphoinositide 3-kinase-C2-alpha) (p170)
ruditapes_c19976	phosphoinositide-mediated signaling	signal transduction	P	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3K-C2-alpha) (PtdIns-3-kinase C2 subunit alpha) (EC 2.7.1.154) (Cpk-m) (Phosphoinositide 3-kinase-C2-alpha) (p170)
ruditapes_c31924	ossification	developmental processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	chondroblast differentiation	developmental processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	chondrocyte development	developmental processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	proteoglycan biosynthetic process	other metabolic processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	response to gravity	other biological processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	central nervous system development	developmental processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	response to organic cyclic substance	other biological processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	negative regulation of cell migration	other biological processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	cartilage condensation	developmental processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	cartilage condensation	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	response to mechanical stimulus	other biological processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	response to radiation	other biological processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	collagen fibril organization	cell organization and biogenesis	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	spinal cord development	developmental processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	response to glucose stimulus	other biological processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	cell adhesion	cell adhesion	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	response to acidity	other biological processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	response to drug	other biological processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes_c31924	multicellular organismal aging	developmental processes	P	Aggrecan core protein (Cartilage-specific proteoglycan core protein) (CSPCP)
ruditapes2_c5981	cell differentiation	other biological processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	stem cell maintenance	other biological processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	germ-line stem cell maintenance	other biological processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	trophectodermal cell differentiation	developmental processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	hair follicle development	developmental processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	cerebral cortex development	developmental processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	forebrain neuron fate commitment	developmental processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	somatic stem cell maintenance	other biological processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	skin development	developmental processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	regulation of epidermis development	developmental processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis	developmental processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	male gonad development	developmental processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes2_c5981	sebaceous gland development	developmental processes	P	Transcription factor AP-2 gamma (AP2-gamma) (AP-2.2) (Activating enhancer-binding protein 2 gamma)
ruditapes_lrc9369	regulation of neuronal synaptic plasticity	cell-cell signaling	P	Brevican core protein
ruditapes_lrc9369	cell adhesion	cell adhesion	P	Brevican core protein
ruditapes_c28301	hippocampus development	developmental processes	P	Brevican core protein
ruditapes_c28301	regulation of neuronal synaptic plasticity	cell-cell signaling	P	Brevican core protein
ruditapes_c28301	cell adhesion	cell adhesion	P	Brevican core protein
ruditapes_lrc9369	hippocampus development	developmental processes	P	Brevican core protein
ruditapes2_c537	fatty acid beta-oxidation	other metabolic processes	P	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase)"
ruditapes2_c537	negative regulation of insulin secretion	transport	P	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase)"
ruditapes2_c537	negative regulation of insulin secretion	cell-cell signaling	P	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase)"
ruditapes2_c537	response to drug	other biological processes	P	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase)"
ruditapes2_c537	response to hormone stimulus	other biological processes	P	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase)"
ruditapes2_c537	response to activity	other biological processes	P	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase)"
ruditapes2_c537	lipid metabolic process	other metabolic processes	P	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase)"
ruditapes2_c537	fatty acid metabolic process	other metabolic processes	P	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase)"
ruditapes2_c537	response to insulin stimulus	other biological processes	P	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase)"
ruditapes2_c537	oxidation reduction	other metabolic processes	P	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase)"
ruditapes_c27932	regulation of apoptosis	death	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	in utero embryonic development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	inner ear development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	embryonic gut development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	embryonic digestive tract morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	kidney development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	brain development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	oligodendrocyte differentiation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	negative thymic T cell selection	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	tube development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	branching morphogenesis of a tube	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	negative regulation of cell proliferation	cell cycle and proliferation	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	anatomical structure development	other biological processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	neural tube development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	limb morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	smoothened signaling pathway	signal transduction	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	melanocyte differentiation	other biological processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	mammary gland development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	metanephros development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	lambdoid suture morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	neuron fate commitment	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	pallium development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	branching involved in ureteric bud morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	anterior/posterior pattern formation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	mammary gland specification	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	regulation of cell proliferation	cell cycle and proliferation	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	embryonic limb morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	thymocyte apoptosis	death	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	odontogenesis of dentine-containing tooth	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	forebrain dorsal/ventral pattern formation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	central nervous system development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	spinal cord dorsal/ventral patterning	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	telencephalon development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	smoothened signaling pathway involved in ventral spinal cord interneuron specification	signal transduction	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	smoothened signaling pathway involved in ventral spinal cord interneuron specification	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	positive regulation of protein import into nucleus	transport	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	lateral ganglionic eminence cell proliferation	cell cycle and proliferation	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	lateral ganglionic eminence cell proliferation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	negative regulation of apoptosis	death	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	embryonic skeletal system morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	developmental growth	other biological processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	hindgut morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	protein processing	protein metabolism	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	negative regulation of alpha-beta T cell differentiation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	optic nerve morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	frontal suture morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	camera-type eye morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	lung development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	positive regulation of chondrocyte differentiation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	regulation of gene expression	other metabolic processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	negative regulation of neuron differentiation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	tongue development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	palate development	other biological processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	limb development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	dorsal/ventral pattern formation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	heart development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	radial glial cell differentiation in the forebrain	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	sagittal suture morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	subpallium development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	cerebral cortex radial glia guided migration	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	axon guidance	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	axon guidance	cell organization and biogenesis	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	embryonic digit morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	proximal/distal pattern formation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	positive regulation of neuroblast proliferation	cell cycle and proliferation	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	positive regulation of neuroblast proliferation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	T cell differentiation in the thymus	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	anatomical structure formation involved in morphogenesis	other biological processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	regulation of cell differentiation	other biological processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	smoothened signaling pathway involved in spinal cord motor neuron cell fate specification	signal transduction	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	smoothened signaling pathway involved in spinal cord motor neuron cell fate specification	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	negative regulation of cell differentiation	other biological processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	positive regulation of alpha-beta T cell differentiation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	forebrain development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	negative regulation of smoothened signaling pathway	signal transduction	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	embryonic morphogenesis	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	positive regulation of osteoblast differentiation	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	camera-type eye development	developmental processes	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c27932	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator GLI3 (GLI3 form of 190 kDa) (GLI3-190) (GLI3 full length protein) (GLI3FL) [Cleaved into: Transcriptional repressor GLI3R (GLI3 C-terminally truncated form) (GLI3 form of 83 kDa) (GLI3-83)]
ruditapes_c11261	positive regulation of T-helper 1 cell differentiation	developmental processes	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes_c11261	organ development	developmental processes	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes_c11261	positive regulation of organ growth	other biological processes	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes_c11261	positive regulation of cell proliferation	cell cycle and proliferation	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes_c11261	"transcription, DNA-dependent"	RNA metabolism	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes_c11261	skeletal muscle tissue development	developmental processes	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes_c11261	negative regulation of T-helper 2 cell differentiation	developmental processes	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes_c11261	liver development	developmental processes	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes_c11261	"regulation of transcription, DNA-dependent"	RNA metabolism	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes_c11261	cell differentiation	other biological processes	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes_c11261	embryonic digestive tract morphogenesis	developmental processes	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes_c11261	enteric nervous system development	developmental processes	P	H2.0-like homeobox protein (Homeobox protein HLX1)
ruditapes2_lrc3470	gonadal mesoderm development	developmental processes	P	Nucleoside-diphosphatase mig-23 (NDPase) (EC 3.6.1.6) (Abnormal cell migration protein 23)
ruditapes2_lrc3470	cell differentiation	other biological processes	P	Nucleoside-diphosphatase mig-23 (NDPase) (EC 3.6.1.6) (Abnormal cell migration protein 23)
ruditapes2_lrc3470	multicellular organismal development	developmental processes	P	Nucleoside-diphosphatase mig-23 (NDPase) (EC 3.6.1.6) (Abnormal cell migration protein 23)
ruditapes_c22422	opsonization	transport	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	opsonization	cell organization and biogenesis	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	response to lipopolysaccharide	other biological processes	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	acute-phase response	stress response	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	defense response to Gram-negative bacterium	stress response	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	negative regulation of tumor necrosis factor production	other biological processes	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	leukocyte chemotaxis during inflammatory response	stress response	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	lipopolysaccharide-mediated signaling pathway	signal transduction	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	positive regulation of respiratory burst during acute inflammatory response	stress response	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	positive regulation of respiratory burst during acute inflammatory response	other metabolic processes	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	positive regulation of interleukin-8 production	other biological processes	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	defense response to bacterium	stress response	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	defense response to Gram-positive bacterium	stress response	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	transport	transport	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	lipid transport	transport	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	positive regulation of tumor necrosis factor production	other biological processes	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	positive regulation of tumor necrosis factor biosynthetic process	other metabolic processes	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	detection of molecule of bacterial origin	other biological processes	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	positive regulation of interleukin-6 production	other biological processes	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	innate immune response	stress response	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	lipopolysaccharide transport	transport	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	positive regulation of macrophage activation	other biological processes	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	positive regulation of toll-like receptor 4 signaling pathway	signal transduction	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	positive regulation of toll-like receptor 4 signaling pathway	stress response	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	positive regulation of chemokine production	other biological processes	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c22422	macrophage activation during immune response	other biological processes	P	Lipopolysaccharide-binding protein (LBP)
ruditapes_c25332	receptor-mediated endocytosis	transport	P	Macrophage mannose receptor 1 (MMR) (CD antigen CD206)
ruditapes_c25332	receptor-mediated endocytosis	cell organization and biogenesis	P	Macrophage mannose receptor 1 (MMR) (CD antigen CD206)
ruditapes2_c137	endocytosis	transport	P	Macrophage mannose receptor 1 (MMR) (CD antigen CD206)
ruditapes2_c137	endocytosis	cell organization and biogenesis	P	Macrophage mannose receptor 1 (MMR) (CD antigen CD206)
ruditapes_c25332	endocytosis	transport	P	Macrophage mannose receptor 1 (MMR) (CD antigen CD206)
ruditapes_c25332	endocytosis	cell organization and biogenesis	P	Macrophage mannose receptor 1 (MMR) (CD antigen CD206)
ruditapes2_c137	receptor-mediated endocytosis	transport	P	Macrophage mannose receptor 1 (MMR) (CD antigen CD206)
ruditapes2_c137	receptor-mediated endocytosis	cell organization and biogenesis	P	Macrophage mannose receptor 1 (MMR) (CD antigen CD206)
ruditapes_c901	oxidation reduction	other metabolic processes	P	"NAD(P) transhydrogenase, mitochondrial (EC 1.6.1.2) (Nicotinamide nucleotide transhydrogenase) (Pyridine nucleotide transhydrogenase)"
ruditapes_lrc38053	proton transport	transport	P	"NAD(P) transhydrogenase, mitochondrial (EC 1.6.1.2) (Nicotinamide nucleotide transhydrogenase) (Pyridine nucleotide transhydrogenase)"
ruditapes_lrc38053	oxidation reduction	other metabolic processes	P	"NAD(P) transhydrogenase, mitochondrial (EC 1.6.1.2) (Nicotinamide nucleotide transhydrogenase) (Pyridine nucleotide transhydrogenase)"
ruditapes_c901	proton transport	transport	P	"NAD(P) transhydrogenase, mitochondrial (EC 1.6.1.2) (Nicotinamide nucleotide transhydrogenase) (Pyridine nucleotide transhydrogenase)"
ruditapes_s37327	metabolic process	other metabolic processes	P	Beta-hexosaminidase A (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_s37327	carbohydrate metabolic process	other metabolic processes	P	Beta-hexosaminidase A (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (N-acetyl-beta-glucosaminidase)
ruditapes_c17198	transport	transport	P	Probable V-type proton ATPase subunit H 2 (V-ATPase subunit H 2) (Vacuolar proton pump subunit H 2)
ruditapes_c17198	ATP hydrolysis coupled proton transport	transport	P	Probable V-type proton ATPase subunit H 2 (V-ATPase subunit H 2) (Vacuolar proton pump subunit H 2)
ruditapes_c17198	ion transport	transport	P	Probable V-type proton ATPase subunit H 2 (V-ATPase subunit H 2) (Vacuolar proton pump subunit H 2)
ruditapes_c17198	proton transport	transport	P	Probable V-type proton ATPase subunit H 2 (V-ATPase subunit H 2) (Vacuolar proton pump subunit H 2)
ruditapes_c21415	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription 1
ruditapes_c21415	signal transduction	signal transduction	P	Signal transducer and activator of transcription 1
ruditapes_c21415	multicellular organismal development	developmental processes	P	Signal transducer and activator of transcription 1
ruditapes_c21415	"transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription 1
ruditapes2_c8	protein amino acid phosphorylation	protein metabolism	P	Protein roller-3
ruditapes2_c8	locomotion	other biological processes	P	Protein roller-3
ruditapes2_c8	collagen and cuticulin-based cuticle development	developmental processes	P	Protein roller-3
ruditapes2_c8	positive regulation of growth rate	other biological processes	P	Protein roller-3
ruditapes2_c8	embryonic development ending in birth or egg hatching	developmental processes	P	Protein roller-3
ruditapes_c25068	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c25068	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c25068	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (Mediator complex subunit rgr-1)
ruditapes_c31869	translation	protein metabolism	P	O-phosphoseryl-tRNA(Sec) selenium transferase (EC 2.9.1.2) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase) (Sep-tRNA:Sec-tRNA synthase) (SepSecS) (UGA suppressor tRNA-associated protein homolog)
ruditapes_c26559	transport	transport	P	Vacuolar protein sorting-associated protein 54
ruditapes_c26559	"retrograde transport, endosome to Golgi"	transport	P	Vacuolar protein sorting-associated protein 54
ruditapes_c26559	protein transport	transport	P	Vacuolar protein sorting-associated protein 54
ruditapes_c28732	vesicle-mediated transport	transport	P	ADP-ribosylation factor 1-like 2 (ADP-ribosylation factor-related protein 1.2)
ruditapes_c28732	protein transport	transport	P	ADP-ribosylation factor 1-like 2 (ADP-ribosylation factor-related protein 1.2)
ruditapes_c28732	transport	transport	P	ADP-ribosylation factor 1-like 2 (ADP-ribosylation factor-related protein 1.2)
ruditapes_c28732	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor 1-like 2 (ADP-ribosylation factor-related protein 1.2)
ruditapes_c6545	protein transport	transport	P	Nascent polypeptide-associated complex subunit alpha (NAC-alpha) (Alpha-NAC)
ruditapes_c6545	transport	transport	P	Nascent polypeptide-associated complex subunit alpha (NAC-alpha) (Alpha-NAC)
ruditapes2_c5110	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc35660	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c5061	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c5061	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c1994	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c5061	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c35049	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c2352	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc35660	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c2352	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c35049	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c5061	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c2352	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c5110	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c1478	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc35660	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c35049	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c1478	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c1478	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c5110	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c5110	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c1994	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c35049	cell adhesion	cell adhesion	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c1994	regulation of Notch signaling pathway	signal transduction	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c1478	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_lrc35660	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c1994	tissue development	developmental processes	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes_c2352	extracellular matrix organization	cell organization and biogenesis	P	Periostin (PN) (Osteoblast-specific factor 2) (OSF-2)
ruditapes2_c2622	receptor-mediated endocytosis	transport	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes2_c2622	receptor-mediated endocytosis	cell organization and biogenesis	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c8198	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c8198	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes2_c2622	endocytosis	transport	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes2_c2622	endocytosis	cell organization and biogenesis	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c8198	receptor-mediated endocytosis	transport	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c8198	receptor-mediated endocytosis	cell organization and biogenesis	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c9004	cytokine production	other biological processes	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes2_c2622	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes2_c2622	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c8198	cytokine production	other biological processes	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes2_c2622	regulation of phospholipase A2 activity	other biological processes	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c8198	endocytosis	cell organization and biogenesis	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c9004	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c9004	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c9004	regulation of phospholipase A2 activity	other biological processes	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c9004	endocytosis	transport	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c9004	endocytosis	cell organization and biogenesis	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c8198	endocytosis	transport	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c9004	receptor-mediated endocytosis	transport	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c9004	receptor-mediated endocytosis	cell organization and biogenesis	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c8198	regulation of phospholipase A2 activity	other biological processes	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes2_c2622	cytokine production	other biological processes	P	Secretory phospholipase A2 receptor (PLA2-R) (PLA2R) (180 kDa secretory phospholipase A2 receptor) (M-type receptor) [Cleaved into: Soluble secretory phospholipase A2 receptor (Soluble PLA2-R) (Soluble PLA2R)]
ruditapes_c22305	ureteric bud development	developmental processes	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c22305	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c11661	lymphangiogenesis	developmental processes	P	Tyrosine-protein phosphatase non-receptor type 14 (EC 3.1.3.48) (Protein-tyrosine phosphatase PTP36)
ruditapes_c11661	dephosphorylation	other metabolic processes	P	Tyrosine-protein phosphatase non-receptor type 14 (EC 3.1.3.48) (Protein-tyrosine phosphatase PTP36)
ruditapes_c11661	protein amino acid dephosphorylation	protein metabolism	P	Tyrosine-protein phosphatase non-receptor type 14 (EC 3.1.3.48) (Protein-tyrosine phosphatase PTP36)
ruditapes_c16568	"transcription, DNA-dependent"	RNA metabolism	P	Paired amphipathic helix protein Sin3b (Histone deacetylase complex subunit Sin3b) (Transcriptional corepressor Sin3b)
ruditapes_c16568	negative regulation of cell cycle	cell cycle and proliferation	P	Paired amphipathic helix protein Sin3b (Histone deacetylase complex subunit Sin3b) (Transcriptional corepressor Sin3b)
ruditapes_c16568	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Paired amphipathic helix protein Sin3b (Histone deacetylase complex subunit Sin3b) (Transcriptional corepressor Sin3b)
ruditapes_c16568	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Paired amphipathic helix protein Sin3b (Histone deacetylase complex subunit Sin3b) (Transcriptional corepressor Sin3b)
ruditapes_c16568	skeletal muscle tissue development	developmental processes	P	Paired amphipathic helix protein Sin3b (Histone deacetylase complex subunit Sin3b) (Transcriptional corepressor Sin3b)
ruditapes_c16568	cardiac muscle tissue development	developmental processes	P	Paired amphipathic helix protein Sin3b (Histone deacetylase complex subunit Sin3b) (Transcriptional corepressor Sin3b)
ruditapes2_c2584	DNA repair	stress response	P	Replication protein A 32 kDa subunit (RP-A p32) (Replication factor A protein 2) (RF-A protein 2) (Replication protein A 34 kDa subunit) (RP-A p34)
ruditapes2_c2584	DNA repair	DNA metabolism	P	Replication protein A 32 kDa subunit (RP-A p32) (Replication factor A protein 2) (RF-A protein 2) (Replication protein A 34 kDa subunit) (RP-A p34)
ruditapes2_c2584	regulation of double-strand break repair via homologous recombination	DNA metabolism	P	Replication protein A 32 kDa subunit (RP-A p32) (Replication factor A protein 2) (RF-A protein 2) (Replication protein A 34 kDa subunit) (RP-A p34)
ruditapes2_c2584	DNA replication	DNA metabolism	P	Replication protein A 32 kDa subunit (RP-A p32) (Replication factor A protein 2) (RF-A protein 2) (Replication protein A 34 kDa subunit) (RP-A p34)
ruditapes2_c2584	response to DNA damage stimulus	stress response	P	Replication protein A 32 kDa subunit (RP-A p32) (Replication factor A protein 2) (RF-A protein 2) (Replication protein A 34 kDa subunit) (RP-A p34)
ruditapes2_c2584	regulation of double-strand break repair via homologous recombination	stress response	P	Replication protein A 32 kDa subunit (RP-A p32) (Replication factor A protein 2) (RF-A protein 2) (Replication protein A 34 kDa subunit) (RP-A p34)
ruditapes2_c2584	DNA recombination	DNA metabolism	P	Replication protein A 32 kDa subunit (RP-A p32) (Replication factor A protein 2) (RF-A protein 2) (Replication protein A 34 kDa subunit) (RP-A p34)
ruditapes_c19443	regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c22095	placenta development	developmental processes	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes2_c803	regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c19443	apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c19443	negative regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c22095	apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes2_c803	placenta development	developmental processes	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c22095	negative regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes2_c803	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c19443	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes2_c803	negative regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c22095	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes2_c803	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c22095	protein polyubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c19443	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c22095	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c19443	protein polyubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c19443	placenta development	developmental processes	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes2_c803	protein polyubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c22095	regulation of apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes2_c803	apoptosis	death	P	Baculoviral IAP repeat-containing protein 2 (EC 6.3.2.-) (Inhibitor of apoptosis protein 2) (IAP-2) (mIAP-2) (mIAP2)
ruditapes_c14004	binding of sperm to zona pellucida	other biological processes	P	Sperm surface protein Sp17 (Sperm autoantigenic protein 17)
ruditapes_c14004	signal transduction	signal transduction	P	Sperm surface protein Sp17 (Sperm autoantigenic protein 17)
ruditapes_c14004	ciliary or flagellar motility	other biological processes	P	Sperm surface protein Sp17 (Sperm autoantigenic protein 17)
ruditapes2_c1326	signal transduction	signal transduction	P	Testican-1 (Protein SPOCK)
ruditapes2_c1326	negative regulation of endopeptidase activity	other biological processes	P	Testican-1 (Protein SPOCK)
ruditapes2_c1326	neurogenesis	developmental processes	P	Testican-1 (Protein SPOCK)
ruditapes2_c1326	neuron migration	developmental processes	P	Testican-1 (Protein SPOCK)
ruditapes2_c1326	central nervous system neuron differentiation	developmental processes	P	Testican-1 (Protein SPOCK)
ruditapes2_c1326	negative regulation of neuron projection development	developmental processes	P	Testican-1 (Protein SPOCK)
ruditapes2_c1326	negative regulation of neuron projection development	cell organization and biogenesis	P	Testican-1 (Protein SPOCK)
ruditapes2_c1326	negative regulation of cell-substrate adhesion	cell adhesion	P	Testican-1 (Protein SPOCK)
ruditapes_c13291	peptidyl-tyrosine phosphorylation	protein metabolism	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	ossification	developmental processes	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	positive regulation of cell proliferation	cell cycle and proliferation	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	regulation of bone mineralization	developmental processes	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	positive regulation of fibroblast migration	other biological processes	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	positive regulation of protein kinase activity	other metabolic processes	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	protein amino acid phosphorylation	protein metabolism	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	positive regulation of transcription factor activity	RNA metabolism	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	positive regulation of osteoblast differentiation	developmental processes	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	phosphorylation	other metabolic processes	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	protein amino acid autophosphorylation	protein metabolism	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	cell adhesion	cell adhesion	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c13291	positive regulation of fibroblast proliferation	cell cycle and proliferation	P	"Discoidin domain-containing receptor 2 (Discoidin domain receptor 2) (EC 2.7.10.1) (CD167 antigen-like family member B) (Neurotrophic tyrosine kinase, receptor-related 3) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO10) (CD antigen CD167b)"
ruditapes_c27911	regulation of RNA elongation	RNA metabolism	P	Transcription elongation factor SPT6
ruditapes_c27911	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation factor SPT6
ruditapes_c27911	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT6
ruditapes_c27911	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Transcription elongation factor SPT6
ruditapes_c27911	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT6
ruditapes_lrc23059	"DNA damage response, signal transduction resulting in induction of apoptosis"	signal transduction	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	"DNA damage response, signal transduction resulting in induction of apoptosis"	stress response	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	"DNA damage response, signal transduction resulting in induction of apoptosis"	death	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	negative regulation of B cell proliferation	cell cycle and proliferation	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	response to DNA damage stimulus	stress response	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	peptidyl-serine phosphorylation	protein metabolism	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	DNA damage induced protein phosphorylation	stress response	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	DNA damage induced protein phosphorylation	protein metabolism	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	negative regulation of apoptosis	death	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	G2/M transition DNA damage checkpoint	cell cycle and proliferation	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	G2/M transition DNA damage checkpoint	signal transduction	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	G2/M transition DNA damage checkpoint	stress response	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	mitotic cell cycle spindle assembly checkpoint	cell cycle and proliferation	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	mitotic cell cycle spindle assembly checkpoint	cell organization and biogenesis	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	neuron apoptosis	death	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	response to hypoxia	stress response	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	histone phosphorylation	protein metabolism	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	histone phosphorylation	cell organization and biogenesis	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	heart development	developmental processes	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	cell cycle	cell cycle and proliferation	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	protein amino acid autophosphorylation	protein metabolism	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	female gamete generation	other biological processes	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	response to ionizing radiation	other biological processes	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	pre-B cell allelic exclusion	developmental processes	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	somitogenesis	developmental processes	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	cell cycle arrest	cell cycle and proliferation	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	DNA repair	DNA metabolism	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	phosphorylation	other metabolic processes	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	positive regulation of neuron apoptosis	death	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	"positive regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	brain development	developmental processes	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	DNA damage checkpoint	cell cycle and proliferation	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	DNA damage checkpoint	signal transduction	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	DNA damage checkpoint	stress response	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	DNA repair	stress response	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	positive regulation of apoptosis	death	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	regulation of cell cycle	cell cycle and proliferation	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	lipoprotein catabolic process	other metabolic processes	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	protein amino acid phosphorylation	protein metabolism	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_lrc23059	apoptosis	death	P	Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
ruditapes_c17858	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 92 (Zfp-92)
ruditapes_c17858	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 92 (Zfp-92)
ruditapes_c17858	biological_process	other biological processes	P	Zinc finger protein 92 (Zfp-92)
ruditapes_c30238	interleukin-1-mediated signaling pathway	signal transduction	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	phosphorylation	other metabolic processes	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	response to lipopolysaccharide	other biological processes	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	activation of NF-kappaB-inducing kinase activity	signal transduction	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	lipopolysaccharide-mediated signaling pathway	signal transduction	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	signal transduction	signal transduction	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	regulation of cytokine-mediated signaling pathway	signal transduction	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	protein amino acid autophosphorylation	protein metabolism	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	response to interleukin-1	other biological processes	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	cytokine-mediated signaling pathway	signal transduction	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	toll-like receptor 2 signaling pathway	signal transduction	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	toll-like receptor 2 signaling pathway	stress response	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	positive regulation of MAP kinase activity	other metabolic processes	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	response to peptidoglycan	other biological processes	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	innate immune response	stress response	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	protein amino acid phosphorylation	protein metabolism	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	protein oligomerization	cell organization and biogenesis	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	toll-like receptor 4 signaling pathway	signal transduction	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	toll-like receptor 4 signaling pathway	stress response	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	positive regulation of JUN kinase activity	signal transduction	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	positive regulation of JUN kinase activity	stress response	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c30238	positive regulation of JUN kinase activity	protein metabolism	P	Interleukin-1 receptor-associated kinase 1 (IRAK) (IRAK-1) (EC 2.7.11.1) (Pelle-like protein kinase) (mPLK)
ruditapes_c8995	protein amino acid phosphorylation	protein metabolism	P	Ephrin type-A receptor 6 (EC 2.7.10.1) (EPH homology kinase 2) (EHK-2)
ruditapes_c8995	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Ephrin type-A receptor 6 (EC 2.7.10.1) (EPH homology kinase 2) (EHK-2)
ruditapes_c8995	ephrin receptor signaling pathway	signal transduction	P	Ephrin type-A receptor 6 (EC 2.7.10.1) (EPH homology kinase 2) (EHK-2)
ruditapes_c8995	phosphorylation	other metabolic processes	P	Ephrin type-A receptor 6 (EC 2.7.10.1) (EPH homology kinase 2) (EHK-2)
ruditapes2_lrc4864	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes2_lrc4810	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes_lrc32834	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes2_lrc4821	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes2_lrc4810	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes_lrc32834	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes2_lrc4821	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes2_lrc4864	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 (Complex I-MLRQ) (CI-MLRQ) (NADH-ubiquinone oxidoreductase MLRQ subunit)
ruditapes2_c1266	cytoskeleton organization	cell organization and biogenesis	P	Villin-1
ruditapes2_c1266	actin filament polymerization	cell organization and biogenesis	P	Villin-1
ruditapes2_c1266	apoptosis	death	P	Villin-1
ruditapes2_c1266	response to bacterium	other biological processes	P	Villin-1
ruditapes2_c1266	epidermal growth factor receptor signaling pathway	signal transduction	P	Villin-1
ruditapes2_c1266	regulation of actin nucleation	cell organization and biogenesis	P	Villin-1
ruditapes2_c1266	positive regulation of cell migration	other biological processes	P	Villin-1
ruditapes2_c1266	positive regulation of epithelial cell migration	other biological processes	P	Villin-1
ruditapes2_c1266	positive regulation of actin filament bundle formation	cell organization and biogenesis	P	Villin-1
ruditapes2_c1266	actin filament severing	other biological processes	P	Villin-1
ruditapes2_c1266	regulation of cell shape	cell organization and biogenesis	P	Villin-1
ruditapes2_c1266	negative regulation of caspase activity	death	P	Villin-1
ruditapes2_c1266	cytoplasmic actin-based contraction involved in cell motility	transport	P	Villin-1
ruditapes2_c1266	actin filament depolymerization	cell organization and biogenesis	P	Villin-1
ruditapes2_c1266	actin filament capping	protein metabolism	P	Villin-1
ruditapes2_c1266	actin filament capping	cell organization and biogenesis	P	Villin-1
ruditapes_c7680	integrin-mediated signaling pathway	signal transduction	P	Integrin alpha-2 (CD49 antigen-like family member B) (Collagen receptor) (Platelet membrane glycoprotein Ia) (GPIa) (VLA-2 subunit alpha) (CD antigen CD49b)
ruditapes_c7680	cell adhesion	cell adhesion	P	Integrin alpha-2 (CD49 antigen-like family member B) (Collagen receptor) (Platelet membrane glycoprotein Ia) (GPIa) (VLA-2 subunit alpha) (CD antigen CD49b)
ruditapes_c8687	cell adhesion	cell adhesion	P	Integrin alpha-2 (CD49 antigen-like family member B) (Collagen receptor) (Platelet membrane glycoprotein Ia) (GPIa) (VLA-2 subunit alpha) (CD antigen CD49b)
ruditapes_c8687	integrin-mediated signaling pathway	signal transduction	P	Integrin alpha-2 (CD49 antigen-like family member B) (Collagen receptor) (Platelet membrane glycoprotein Ia) (GPIa) (VLA-2 subunit alpha) (CD antigen CD49b)
ruditapes_c16733	regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4E-binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I)
ruditapes_c16733	TOR signaling pathway	signal transduction	P	Eukaryotic translation initiation factor 4E-binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I)
ruditapes_c16733	negative regulation of translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 4E-binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I)
ruditapes_c16733	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Eukaryotic translation initiation factor 4E-binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I)
ruditapes_c16733	negative regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4E-binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I)
ruditapes_c16733	response to ethanol	other biological processes	P	Eukaryotic translation initiation factor 4E-binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I)
ruditapes_c16733	positive regulation of mitotic cell cycle	cell cycle and proliferation	P	Eukaryotic translation initiation factor 4E-binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I)
ruditapes_c16733	lung development	developmental processes	P	Eukaryotic translation initiation factor 4E-binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I)
ruditapes_c16733	insulin receptor signaling pathway	signal transduction	P	Eukaryotic translation initiation factor 4E-binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I)
ruditapes_c16733	negative regulation of protein complex assembly	cell organization and biogenesis	P	Eukaryotic translation initiation factor 4E-binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I)
ruditapes_c16689	regulation of sensory perception of pain	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2D (GluN2D) (Glutamate [NMDA] receptor subunit epsilon-4) (N-methyl D-aspartate receptor subtype 2D) (NMDAR2D) (NR2D)"
ruditapes_c16689	ionotropic glutamate receptor signaling pathway	signal transduction	P	"Glutamate receptor ionotropic, NMDA 2D (GluN2D) (Glutamate [NMDA] receptor subunit epsilon-4) (N-methyl D-aspartate receptor subtype 2D) (NMDAR2D) (NR2D)"
ruditapes_c16689	transport	transport	P	"Glutamate receptor ionotropic, NMDA 2D (GluN2D) (Glutamate [NMDA] receptor subunit epsilon-4) (N-methyl D-aspartate receptor subtype 2D) (NMDAR2D) (NR2D)"
ruditapes_c16689	adult locomotory behavior	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2D (GluN2D) (Glutamate [NMDA] receptor subunit epsilon-4) (N-methyl D-aspartate receptor subtype 2D) (NMDAR2D) (NR2D)"
ruditapes_c16689	signal transduction	signal transduction	P	"Glutamate receptor ionotropic, NMDA 2D (GluN2D) (Glutamate [NMDA] receptor subunit epsilon-4) (N-methyl D-aspartate receptor subtype 2D) (NMDAR2D) (NR2D)"
ruditapes_c16689	startle response	other biological processes	P	"Glutamate receptor ionotropic, NMDA 2D (GluN2D) (Glutamate [NMDA] receptor subunit epsilon-4) (N-methyl D-aspartate receptor subtype 2D) (NMDAR2D) (NR2D)"
ruditapes_c16689	ion transport	transport	P	"Glutamate receptor ionotropic, NMDA 2D (GluN2D) (Glutamate [NMDA] receptor subunit epsilon-4) (N-methyl D-aspartate receptor subtype 2D) (NMDAR2D) (NR2D)"
ruditapes_c16689	"synaptic transmission, glutamatergic"	cell-cell signaling	P	"Glutamate receptor ionotropic, NMDA 2D (GluN2D) (Glutamate [NMDA] receptor subunit epsilon-4) (N-methyl D-aspartate receptor subtype 2D) (NMDAR2D) (NR2D)"
ruditapes2_c2308	lipid metabolic process	other metabolic processes	P	"Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial (EC 5.3.3.-)"
ruditapes2_c2308	fatty acid metabolic process	other metabolic processes	P	"Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial (EC 5.3.3.-)"
ruditapes2_c2308	metabolic process	other metabolic processes	P	"Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial (EC 5.3.3.-)"
ruditapes2_c3111	biological_process	other biological processes	P	Galectin-8 (Gal-8) (30 kDa S-type lectin) (RL-30)
ruditapes_c32923	biological_process	other biological processes	P	Galectin-8 (Gal-8) (30 kDa S-type lectin) (RL-30)
ruditapes2_c438	biological_process	other biological processes	P	Galectin-8 (Gal-8) (30 kDa S-type lectin) (RL-30)
ruditapes_c30593	protein polyubiquitination	protein metabolism	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (100 kDa protein) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog)"
ruditapes_c30593	"positive regulation of protein import into nucleus, translocation"	transport	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (100 kDa protein) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog)"
ruditapes_c30593	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (100 kDa protein) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog)"
ruditapes_c30593	protein ubiquitination	protein metabolism	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (100 kDa protein) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog)"
ruditapes_c30593	protein modification process	protein metabolism	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (100 kDa protein) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog)"
ruditapes_c30593	progesterone receptor signaling pathway	signal transduction	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (100 kDa protein) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog)"
ruditapes_c30593	response to DNA damage stimulus	stress response	P	"E3 ubiquitin-protein ligase UBR5 (EC 6.3.2.-) (100 kDa protein) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (Hyperplastic discs protein homolog)"
ruditapes_c28364	positive regulation of apoptosis	death	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of phosphoprotein phosphatase activity	other metabolic processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	innate immune response	stress response	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	response to interleukin-12	other biological processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of nitric-oxide synthase biosynthetic process	other metabolic processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	response to antibiotic	other biological processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	platelet-derived growth factor receptor signaling pathway	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	mineralocorticoid receptor signaling pathway	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	signal transduction	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	regulation of inflammatory response	stress response	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	tyrosine phosphorylation of Stat3 protein	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	tyrosine phosphorylation of Stat3 protein	protein metabolism	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	growth hormone receptor signaling pathway	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	JAK-STAT cascade involved in growth hormone signaling pathway	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	protein amino acid autophosphorylation	protein metabolism	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	interferon-gamma-mediated signaling pathway	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of cell differentiation	other biological processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	JAK-STAT cascade	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	negative regulation of cell-cell adhesion	cell adhesion	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	response to oxidative stress	stress response	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of DNA binding	other biological processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of cell-substrate adhesion	cell adhesion	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	chromatin modification	cell organization and biogenesis	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	neuroprotection	death	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	axon regeneration	stress response	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	axon regeneration	developmental processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	axon regeneration	cell organization and biogenesis	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	response to tumor necrosis factor	other biological processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of cell migration	other biological processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	response to hydroperoxide	stress response	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	protein kinase cascade	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	tyrosine phosphorylation of Stat1 protein	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	tyrosine phosphorylation of Stat1 protein	protein metabolism	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of transcription factor activity	RNA metabolism	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of tyrosine phosphorylation of Stat3 protein	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of tyrosine phosphorylation of Stat3 protein	protein metabolism	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of insulin secretion	transport	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of insulin secretion	cell-cell signaling	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	negative regulation of heart contraction	other biological processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	activation of JAK2 kinase activity	protein metabolism	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of cell proliferation	cell cycle and proliferation	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	"positive regulation of protein import into nucleus, translocation"	transport	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	G-protein coupled receptor protein signaling pathway	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of interleukin-1 beta production	other biological processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of inflammatory response	stress response	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	erythrocyte differentiation	developmental processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	hormone-mediated signaling	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	induction of apoptosis by oxidative stress	death	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	activation of JAK2 kinase activity	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	tumor necrosis factor-mediated signaling pathway	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	cytokine-mediated signaling pathway	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	positive regulation of cell activation	other biological processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	elevation of cytosolic calcium ion concentration	other biological processes	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	activation of MAPKK activity	signal transduction	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c28364	activation of MAPKK activity	protein metabolism	P	Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2)
ruditapes_c4511	JAK-STAT cascade	signal transduction	P	Signal transducer and activator of transcription 5A (Mammary gland factor)
ruditapes_c4511	"transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription 5A (Mammary gland factor)
ruditapes_c4511	response to nutrient levels	other biological processes	P	Signal transducer and activator of transcription 5A (Mammary gland factor)
ruditapes_c4511	reproductive process in a multicellular organism	other biological processes	P	Signal transducer and activator of transcription 5A (Mammary gland factor)
ruditapes_c4511	mammary gland involution	developmental processes	P	Signal transducer and activator of transcription 5A (Mammary gland factor)
ruditapes_c4511	response to ethanol	other biological processes	P	Signal transducer and activator of transcription 5A (Mammary gland factor)
ruditapes_c4511	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription 5A (Mammary gland factor)
ruditapes_c4511	signal transduction	signal transduction	P	Signal transducer and activator of transcription 5A (Mammary gland factor)
ruditapes_c4511	lactation	developmental processes	P	Signal transducer and activator of transcription 5A (Mammary gland factor)
ruditapes_c4511	transcription from RNA polymerase II promoter	RNA metabolism	P	Signal transducer and activator of transcription 5A (Mammary gland factor)
ruditapes_c18138	translation	protein metabolism	P	60S ribosomal protein L5
ruditapes_c26947	vesicle targeting	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	protein targeting to membrane	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	synaptic transmission	cell-cell signaling	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	establishment of cell polarity	cell organization and biogenesis	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	regulation of protein transport	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	positive regulation of calcium-mediated signaling	signal transduction	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	vesicle docking during exocytosis	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	Golgi to transport vesicle transport	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	membrane biogenesis	other biological processes	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	exocytosis	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	transport	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	protein transport	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c26947	oligodendrocyte differentiation	developmental processes	P	Exocyst complex component 4 (Exocyst complex component Sec8) (rSec8)
ruditapes_c16007	protein kinase cascade	signal transduction	P	Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1) (Beta-PAK) (p21-activated kinase 3) (PAK-3) (p65-PAK)
ruditapes_c16007	metabolic process	other metabolic processes	P	Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1) (Beta-PAK) (p21-activated kinase 3) (PAK-3) (p65-PAK)
ruditapes_c16007	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1) (Beta-PAK) (p21-activated kinase 3) (PAK-3) (p65-PAK)
ruditapes_c16007	axonogenesis	developmental processes	P	Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1) (Beta-PAK) (p21-activated kinase 3) (PAK-3) (p65-PAK)
ruditapes_c16007	axonogenesis	cell organization and biogenesis	P	Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1) (Beta-PAK) (p21-activated kinase 3) (PAK-3) (p65-PAK)
ruditapes_c16007	dendrite development	developmental processes	P	Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1) (Beta-PAK) (p21-activated kinase 3) (PAK-3) (p65-PAK)
ruditapes_c16007	dendrite development	cell organization and biogenesis	P	Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1) (Beta-PAK) (p21-activated kinase 3) (PAK-3) (p65-PAK)
ruditapes_c16007	multicellular organismal development	developmental processes	P	Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1) (Beta-PAK) (p21-activated kinase 3) (PAK-3) (p65-PAK)
ruditapes_c16007	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1) (Beta-PAK) (p21-activated kinase 3) (PAK-3) (p65-PAK)
ruditapes_c16007	regulation of actin filament polymerization	protein metabolism	P	Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1) (Beta-PAK) (p21-activated kinase 3) (PAK-3) (p65-PAK)
ruditapes_c16007	regulation of actin filament polymerization	cell organization and biogenesis	P	Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1) (Beta-PAK) (p21-activated kinase 3) (PAK-3) (p65-PAK)
ruditapes2_c1541	transmembrane transport	transport	P	Sodium channel protein type 10 subunit alpha (Peripheral nerve sodium channel 3) (PN3) (Sensory neuron sodium channel) (Sodium channel protein type X subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.8)
ruditapes2_c1541	ion transport	transport	P	Sodium channel protein type 10 subunit alpha (Peripheral nerve sodium channel 3) (PN3) (Sensory neuron sodium channel) (Sodium channel protein type X subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.8)
ruditapes2_c1541	sodium ion transport	transport	P	Sodium channel protein type 10 subunit alpha (Peripheral nerve sodium channel 3) (PN3) (Sensory neuron sodium channel) (Sodium channel protein type X subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.8)
ruditapes2_c1541	regulation of transmembrane ion transport	transport	P	Sodium channel protein type 10 subunit alpha (Peripheral nerve sodium channel 3) (PN3) (Sensory neuron sodium channel) (Sodium channel protein type X subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.8)
ruditapes2_c1541	transport	transport	P	Sodium channel protein type 10 subunit alpha (Peripheral nerve sodium channel 3) (PN3) (Sensory neuron sodium channel) (Sodium channel protein type X subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.8)
ruditapes_lrc13700	potassium ion transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog)"
ruditapes_lrc13700	transmembrane transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog)"
ruditapes_lrc13700	ion transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog)"
ruditapes_lrc13700	transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog)"
ruditapes_lrc13700	regulation of transmembrane ion transport	transport	P	"Calcium-activated potassium channel subunit alpha-1 (BK channel) (BKCA alpha) (Calcium-activated potassium channel, subfamily M subunit alpha-1) (K(VCA)alpha) (KCa1.1) (Maxi K channel) (MaxiK) (Slo-alpha) (Slo1) (Slowpoke homolog) (Slo homolog)"
ruditapes_c23443	transmembrane transport	transport	P	Sodium/iodide cotransporter (Na(+)/I(-) cotransporter) (Sodium-iodide symporter) (Na(+)/I(-) symporter) (Solute carrier family 5 member 5)
ruditapes_c23443	ion transport	transport	P	Sodium/iodide cotransporter (Na(+)/I(-) cotransporter) (Sodium-iodide symporter) (Na(+)/I(-) symporter) (Solute carrier family 5 member 5)
ruditapes_c23443	thyroid hormone generation	other metabolic processes	P	Sodium/iodide cotransporter (Na(+)/I(-) cotransporter) (Sodium-iodide symporter) (Na(+)/I(-) symporter) (Solute carrier family 5 member 5)
ruditapes_c23443	iodide transport	transport	P	Sodium/iodide cotransporter (Na(+)/I(-) cotransporter) (Sodium-iodide symporter) (Na(+)/I(-) symporter) (Solute carrier family 5 member 5)
ruditapes_c23443	sodium ion transport	transport	P	Sodium/iodide cotransporter (Na(+)/I(-) cotransporter) (Sodium-iodide symporter) (Na(+)/I(-) symporter) (Solute carrier family 5 member 5)
ruditapes_c23443	transport	transport	P	Sodium/iodide cotransporter (Na(+)/I(-) cotransporter) (Sodium-iodide symporter) (Na(+)/I(-) symporter) (Solute carrier family 5 member 5)
ruditapes_c21750	negative regulation of peptidase activity	other biological processes	P	Alpha-1-macroglobulin (Alpha-1-M) (Alpha-1-macroglobulin 165 kDa subunit) [Cleaved into: Alpha-1-macroglobulin 45 kDa subunit]
ruditapes_c21750	negative regulation of endopeptidase activity	other biological processes	P	Alpha-1-macroglobulin (Alpha-1-M) (Alpha-1-macroglobulin 165 kDa subunit) [Cleaved into: Alpha-1-macroglobulin 45 kDa subunit]
ruditapes_lrc8556	biological_process	other biological processes	P	Carcinoembryonic antigen-related cell adhesion molecule 3 (Carcinoembryonic antigen CGM1)
ruditapes_c19283	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 1, axonemal (Axonemal beta dynein heavy chain 1) (Ciliary dynein heavy chain 1)"
ruditapes_c237	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 1, axonemal (Axonemal beta dynein heavy chain 1) (Ciliary dynein heavy chain 1)"
ruditapes2_c1445	microtubule-based movement	other biological processes	P	"Dynein heavy chain 1, axonemal (Axonemal beta dynein heavy chain 1) (Ciliary dynein heavy chain 1)"
ruditapes_c19283	microtubule-based movement	other biological processes	P	"Dynein heavy chain 1, axonemal (Axonemal beta dynein heavy chain 1) (Ciliary dynein heavy chain 1)"
ruditapes_c237	microtubule-based movement	other biological processes	P	"Dynein heavy chain 1, axonemal (Axonemal beta dynein heavy chain 1) (Ciliary dynein heavy chain 1)"
ruditapes2_c1445	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 1, axonemal (Axonemal beta dynein heavy chain 1) (Ciliary dynein heavy chain 1)"
ruditapes_c9485	skeletal muscle tissue development	developmental processes	P	Integrin alpha-7 (H36-alpha7) [Cleaved into: Integrin alpha-7 heavy chain; Integrin alpha-7 light chain; Integrin alpha-7 70 kDa form]
ruditapes_c9485	regulation of cell shape	cell organization and biogenesis	P	Integrin alpha-7 (H36-alpha7) [Cleaved into: Integrin alpha-7 heavy chain; Integrin alpha-7 light chain; Integrin alpha-7 70 kDa form]
ruditapes_c9485	cell adhesion	cell adhesion	P	Integrin alpha-7 (H36-alpha7) [Cleaved into: Integrin alpha-7 heavy chain; Integrin alpha-7 light chain; Integrin alpha-7 70 kDa form]
ruditapes_c9485	integrin-mediated signaling pathway	signal transduction	P	Integrin alpha-7 (H36-alpha7) [Cleaved into: Integrin alpha-7 heavy chain; Integrin alpha-7 light chain; Integrin alpha-7 70 kDa form]
ruditapes_c22236	biological_process	other biological processes	P	Unconventional myosin-Id (Myosin heavy chain myr 4)
ruditapes_c22236	negative regulation of phosphatase activity	other metabolic processes	P	Unconventional myosin-Id (Myosin heavy chain myr 4)
ruditapes_c19159	Rho protein signal transduction	signal transduction	P	Unconventional myosin-IXb (Unconventional myosin-9b)
ruditapes_c19159	positive regulation of Rho GTPase activity	signal transduction	P	Unconventional myosin-IXb (Unconventional myosin-9b)
ruditapes_c19159	positive regulation of GTPase activity	other biological processes	P	Unconventional myosin-IXb (Unconventional myosin-9b)
ruditapes_c19159	ATP catabolic process	other metabolic processes	P	Unconventional myosin-IXb (Unconventional myosin-9b)
ruditapes_c19159	signal transduction	signal transduction	P	Unconventional myosin-IXb (Unconventional myosin-9b)
ruditapes_lrc22979	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (Complex I subunit B13) (Complex I-13kD-B) (CI-13kD-B) (NADH-ubiquinone oxidoreductase 13 kDa-B subunit)
ruditapes_lrc22979	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (Complex I subunit B13) (Complex I-13kD-B) (CI-13kD-B) (NADH-ubiquinone oxidoreductase 13 kDa-B subunit)
ruditapes_lrc22979	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (Complex I subunit B13) (Complex I-13kD-B) (CI-13kD-B) (NADH-ubiquinone oxidoreductase 13 kDa-B subunit)
ruditapes_lrc22979	respiratory electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (Complex I subunit B13) (Complex I-13kD-B) (CI-13kD-B) (NADH-ubiquinone oxidoreductase 13 kDa-B subunit)
ruditapes_c21811	regulation of Rho protein signal transduction	signal transduction	P	Guanine nucleotide exchange factor DBS (DBL's big sister) (MCF2-transforming sequence-like protein) (OST oncogene)
ruditapes2_c1362	transport	transport	P	Spliceosome RNA helicase Ddx39b (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (DEAD box protein Uap56)
ruditapes2_c1362	mRNA processing	RNA metabolism	P	Spliceosome RNA helicase Ddx39b (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (DEAD box protein Uap56)
ruditapes2_c1362	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Spliceosome RNA helicase Ddx39b (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (DEAD box protein Uap56)
ruditapes2_c1362	mRNA export from nucleus	transport	P	Spliceosome RNA helicase Ddx39b (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (DEAD box protein Uap56)
ruditapes2_c1362	RNA secondary structure unwinding	RNA metabolism	P	Spliceosome RNA helicase Ddx39b (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (DEAD box protein Uap56)
ruditapes2_c1362	mRNA transport	transport	P	Spliceosome RNA helicase Ddx39b (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (DEAD box protein Uap56)
ruditapes2_c1362	intronless viral mRNA export from host nucleus	transport	P	Spliceosome RNA helicase Ddx39b (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (DEAD box protein Uap56)
ruditapes2_c1362	spliceosome assembly	RNA metabolism	P	Spliceosome RNA helicase Ddx39b (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (DEAD box protein Uap56)
ruditapes2_c1362	spliceosome assembly	cell organization and biogenesis	P	Spliceosome RNA helicase Ddx39b (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (DEAD box protein Uap56)
ruditapes2_c1362	RNA splicing	RNA metabolism	P	Spliceosome RNA helicase Ddx39b (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (DEAD box protein Uap56)
ruditapes_lrc23463	protein amino acid phosphorylation	protein metabolism	P	RAC-gamma serine/threonine-protein kinase (EC 2.7.11.1) (Protein kinase Akt-3) (Protein kinase B gamma) (PKB gamma) (RAC-PK-gamma)
ruditapes_lrc23463	phosphorylation	other metabolic processes	P	RAC-gamma serine/threonine-protein kinase (EC 2.7.11.1) (Protein kinase Akt-3) (Protein kinase B gamma) (PKB gamma) (RAC-PK-gamma)
ruditapes_lrc23463	positive regulation of sodium ion transport	transport	P	RAC-gamma serine/threonine-protein kinase (EC 2.7.11.1) (Protein kinase Akt-3) (Protein kinase B gamma) (PKB gamma) (RAC-PK-gamma)
ruditapes_lrc23463	cellular response to insulin stimulus	other biological processes	P	RAC-gamma serine/threonine-protein kinase (EC 2.7.11.1) (Protein kinase Akt-3) (Protein kinase B gamma) (PKB gamma) (RAC-PK-gamma)
ruditapes_c10491	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c8251	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 6A (26S proteasome AAA-ATPase subunit RPT5) (Proteasome 26S subunit ATPase 3) (Spermatogenic cell/sperm-associated Tat-binding protein homolog SATA) (Tat-binding protein 1) (TBP-1)
ruditapes2_c3331	ATP catabolic process	other metabolic processes	P	26S protease regulatory subunit 6B (26S proteasome AAA-ATPase subunit RPT3) (Proteasome 26S subunit ATPase 4) (S6 ATPase) (Tat-binding protein 7) (TBP-7)
ruditapes_c35090	ATP catabolic process	other metabolic processes	P	26S protease regulatory subunit 6B (26S proteasome AAA-ATPase subunit RPT3) (Proteasome 26S subunit ATPase 4) (S6 ATPase) (Tat-binding protein 7) (TBP-7)
ruditapes_c35090	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 6B (26S proteasome AAA-ATPase subunit RPT3) (Proteasome 26S subunit ATPase 4) (S6 ATPase) (Tat-binding protein 7) (TBP-7)
ruditapes2_c3331	protein catabolic process	protein metabolism	P	26S protease regulatory subunit 6B (26S proteasome AAA-ATPase subunit RPT3) (Proteasome 26S subunit ATPase 4) (S6 ATPase) (Tat-binding protein 7) (TBP-7)
ruditapes_c14404	protein folding	protein metabolism	P	Phosducin-like protein (PHLP)
ruditapes_c14404	visual perception	other biological processes	P	Phosducin-like protein (PHLP)
ruditapes_c14404	response to stimulus	other biological processes	P	Phosducin-like protein (PHLP)
ruditapes_c18492	cell death	death	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	negative regulation of cell proliferation	cell cycle and proliferation	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	negative regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	cell aging	other biological processes	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	cell surface receptor linked signal transduction	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	mRNA transport	transport	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	negative regulation of MAP kinase activity	other metabolic processes	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	cell migration	other biological processes	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	negative regulation of programmed cell death	death	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	negative regulation of Ras protein signal transduction	signal transduction	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	negative regulation of apoptosis	death	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	protein transport	transport	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18492	transport	transport	P	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)
ruditapes_c18089	oxidation reduction	other metabolic processes	P	Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone])
ruditapes_c18089	tricarboxylic acid cycle	other metabolic processes	P	Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone])
ruditapes_c17610	translation	protein metabolism	P	30S ribosomal protein S13
ruditapes_c11958	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c11958	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c11958	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c11958	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c11958	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c11958	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c20816	ubiquinone biosynthetic process	other metabolic processes	P	Probable ubiquinone biosynthesis protein UbiB
ruditapes_c25118	oxidation reduction	other metabolic processes	P	Lysine-specific demethylase 2B (EC 1.14.11.27) (F-box and leucine-rich repeat protein 10) (F-box/LRR-repeat protein 10) (JmjC domain-containing histone demethylation protein 1B) ([Histone-H3]-lysine-36 demethylase 1B)
ruditapes_c25118	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific demethylase 2B (EC 1.14.11.27) (F-box and leucine-rich repeat protein 10) (F-box/LRR-repeat protein 10) (JmjC domain-containing histone demethylation protein 1B) ([Histone-H3]-lysine-36 demethylase 1B)
ruditapes_c25118	chromatin modification	cell organization and biogenesis	P	Lysine-specific demethylase 2B (EC 1.14.11.27) (F-box and leucine-rich repeat protein 10) (F-box/LRR-repeat protein 10) (JmjC domain-containing histone demethylation protein 1B) ([Histone-H3]-lysine-36 demethylase 1B)
ruditapes_c25118	"transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific demethylase 2B (EC 1.14.11.27) (F-box and leucine-rich repeat protein 10) (F-box/LRR-repeat protein 10) (JmjC domain-containing histone demethylation protein 1B) ([Histone-H3]-lysine-36 demethylase 1B)
ruditapes_c25118	histone H3-K36 demethylation	protein metabolism	P	Lysine-specific demethylase 2B (EC 1.14.11.27) (F-box and leucine-rich repeat protein 10) (F-box/LRR-repeat protein 10) (JmjC domain-containing histone demethylation protein 1B) ([Histone-H3]-lysine-36 demethylase 1B)
ruditapes_c25118	histone H3-K36 demethylation	cell organization and biogenesis	P	Lysine-specific demethylase 2B (EC 1.14.11.27) (F-box and leucine-rich repeat protein 10) (F-box/LRR-repeat protein 10) (JmjC domain-containing histone demethylation protein 1B) ([Histone-H3]-lysine-36 demethylase 1B)
ruditapes_c14488	metabolic process	other metabolic processes	P	Sepiapterin reductase (SPR) (EC 1.1.1.153)
ruditapes_c14488	oxidation reduction	other metabolic processes	P	Sepiapterin reductase (SPR) (EC 1.1.1.153)
ruditapes_c14488	tetrahydrobiopterin biosynthetic process	other metabolic processes	P	Sepiapterin reductase (SPR) (EC 1.1.1.153)
ruditapes_c38261	protein amino acid autophosphorylation	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	regulation of vitamin D receptor signaling pathway	signal transduction	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	"transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	calcium ion homeostasis	other biological processes	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	protein amino acid phosphorylation	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	regulation of vitamin D receptor signaling pathway	signal transduction	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	protein ubiquitination	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	regulation of protein stability	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	positive regulation of gene expression	other metabolic processes	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	protein catabolic process	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	protein ubiquitination	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	protein catabolic process	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	regulation of protein stability	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	regulation of apoptosis	death	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	positive regulation of gene expression	other metabolic processes	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	regulation of apoptosis	death	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	negative regulation of cell proliferation	cell cycle and proliferation	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	"transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	protein amino acid phosphorylation	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	negative regulation of cell proliferation	cell cycle and proliferation	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	protein amino acid autophosphorylation	protein metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c18100	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c38261	calcium ion homeostasis	other biological processes	P	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 6.3.2.-) (E3 ubiquitin-protein ligase Trim24) (Tripartite motif-containing protein 24)
ruditapes_c5145	cell adhesion	cell adhesion	P	Collagen alpha-1(XXI) chain
ruditapes_c18768	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_c18768	biological_process	other biological processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_c18768	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_c18768	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)"
ruditapes_c11194	sphingomyelin catabolic process	other metabolic processes	P	Acid sphingomyelinase-like phosphodiesterase 3a (ASM-like phosphodiesterase 3a) (EC 3.1.4.-)
ruditapes_c11194	metabolic process	other metabolic processes	P	Acid sphingomyelinase-like phosphodiesterase 3a (ASM-like phosphodiesterase 3a) (EC 3.1.4.-)
ruditapes_c8290	catecholamine metabolic process	other metabolic processes	P	Dopamine beta-hydroxylase (EC 1.14.17.1) (Dopamine beta-monooxygenase) [Cleaved into: Soluble dopamine beta-hydroxylase]
ruditapes_c8290	catecholamine biosynthetic process	other metabolic processes	P	Dopamine beta-hydroxylase (EC 1.14.17.1) (Dopamine beta-monooxygenase) [Cleaved into: Soluble dopamine beta-hydroxylase]
ruditapes_c8290	oxidation reduction	other metabolic processes	P	Dopamine beta-hydroxylase (EC 1.14.17.1) (Dopamine beta-monooxygenase) [Cleaved into: Soluble dopamine beta-hydroxylase]
ruditapes_c14005	response to ethanol	other biological processes	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes_c14005	angiogenesis	developmental processes	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes_c14005	response to hypoxia	stress response	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes_c14005	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes_c14005	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes_c14005	protein ubiquitination	protein metabolism	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes_c14005	blood vessel endothelial cell migration	other biological processes	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes_c14005	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes_c14005	protein catabolic process	protein metabolism	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes_c14005	extracellular matrix organization	cell organization and biogenesis	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes_c14005	regulation of catecholamine metabolic process	other metabolic processes	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes_c14005	neuron differentiation	developmental processes	P	Von Hippel-Lindau disease tumor suppressor (pVHL)
ruditapes2_c1797	G-protein coupled receptor protein signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes2_c1797	inhibition of adenylate cyclase activity by serotonin receptor signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes2_c1797	inhibition of adenylate cyclase activity by serotonin receptor signaling pathway	other metabolic processes	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes2_c1797	regulation of feeding behavior	other biological processes	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes2_c1797	serotonin receptor signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes2_c1797	signal transduction	signal transduction	P	5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A)
ruditapes_c15917	translation	protein metabolism	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c15917	oligodendrocyte development	developmental processes	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c15917	response to glucose stimulus	other biological processes	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c15917	translational initiation	protein metabolism	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c15917	regulation of catalytic activity	other biological processes	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c15917	regulation of translation	protein metabolism	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c15917	cellular response to stimulus	other biological processes	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c15917	cellular metabolic process	other metabolic processes	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c15917	negative regulation of translational initiation in response to stress	stress response	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c15917	negative regulation of translational initiation in response to stress	protein metabolism	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c15917	response to heat	stress response	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c15917	response to peptide hormone stimulus	other biological processes	P	Translation initiation factor eIF-2B subunit alpha (eIF-2B GDP-GTP exchange factor subunit alpha)
ruditapes_c12786	protein transport	transport	P	Protein dopey-2
ruditapes_c12786	transport	transport	P	Protein dopey-2
ruditapes2_c1147	amino acid transport	transport	P	"Neutral and basic amino acid transport protein rBAT (B(0,+)-type amino acid transport protein) (NAA-TR) (D2)"
ruditapes2_c294	carbohydrate metabolic process	other metabolic processes	P	"Neutral and basic amino acid transport protein rBAT (B(0,+)-type amino acid transport protein) (NAA-TR) (D2)"
ruditapes2_c1147	carbohydrate metabolic process	other metabolic processes	P	"Neutral and basic amino acid transport protein rBAT (B(0,+)-type amino acid transport protein) (NAA-TR) (D2)"
ruditapes2_c1147	transport	transport	P	"Neutral and basic amino acid transport protein rBAT (B(0,+)-type amino acid transport protein) (NAA-TR) (D2)"
ruditapes2_c294	transport	transport	P	"Neutral and basic amino acid transport protein rBAT (B(0,+)-type amino acid transport protein) (NAA-TR) (D2)"
ruditapes2_c294	amino acid transport	transport	P	"Neutral and basic amino acid transport protein rBAT (B(0,+)-type amino acid transport protein) (NAA-TR) (D2)"
ruditapes_c29528	multicellular organismal development	developmental processes	P	Zinc finger and BTB domain-containing protein 7B (Krueppel-related zinc finger protein cKrox) (c-Krox) (T-helper-inducing POZ/Krueppel-like factor) (Zinc finger protein 67) (Zfp-67) (Zinc finger protein Th-POK)
ruditapes_c29528	"regulation of CD4-positive, alpha beta T cell differentiation"	developmental processes	P	Zinc finger and BTB domain-containing protein 7B (Krueppel-related zinc finger protein cKrox) (c-Krox) (T-helper-inducing POZ/Krueppel-like factor) (Zinc finger protein 67) (Zfp-67) (Zinc finger protein Th-POK)
ruditapes_c29528	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Zinc finger and BTB domain-containing protein 7B (Krueppel-related zinc finger protein cKrox) (c-Krox) (T-helper-inducing POZ/Krueppel-like factor) (Zinc finger protein 67) (Zfp-67) (Zinc finger protein Th-POK)
ruditapes_c29528	positive regulation of gene expression	other metabolic processes	P	Zinc finger and BTB domain-containing protein 7B (Krueppel-related zinc finger protein cKrox) (c-Krox) (T-helper-inducing POZ/Krueppel-like factor) (Zinc finger protein 67) (Zfp-67) (Zinc finger protein Th-POK)
ruditapes_c29528	cell differentiation	other biological processes	P	Zinc finger and BTB domain-containing protein 7B (Krueppel-related zinc finger protein cKrox) (c-Krox) (T-helper-inducing POZ/Krueppel-like factor) (Zinc finger protein 67) (Zfp-67) (Zinc finger protein Th-POK)
ruditapes_c29528	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 7B (Krueppel-related zinc finger protein cKrox) (c-Krox) (T-helper-inducing POZ/Krueppel-like factor) (Zinc finger protein 67) (Zfp-67) (Zinc finger protein Th-POK)
ruditapes_c29528	"regulation of CD8-positive, alpha-beta T cell differentiation"	developmental processes	P	Zinc finger and BTB domain-containing protein 7B (Krueppel-related zinc finger protein cKrox) (c-Krox) (T-helper-inducing POZ/Krueppel-like factor) (Zinc finger protein 67) (Zfp-67) (Zinc finger protein Th-POK)
ruditapes_c29528	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 7B (Krueppel-related zinc finger protein cKrox) (c-Krox) (T-helper-inducing POZ/Krueppel-like factor) (Zinc finger protein 67) (Zfp-67) (Zinc finger protein Th-POK)
ruditapes2_c1596	regulation of mast cell degranulation	transport	P	Syntaxin-binding protein 2 (MUSEC1) (Protein unc-18 homolog 2) (Munc18-2) (Unc18-2) (Protein unc-18 homolog B) (Unc-18B)
ruditapes2_c1596	exocytosis	transport	P	Syntaxin-binding protein 2 (MUSEC1) (Protein unc-18 homolog 2) (Munc18-2) (Unc18-2) (Protein unc-18 homolog B) (Unc-18B)
ruditapes2_c1596	transport	transport	P	Syntaxin-binding protein 2 (MUSEC1) (Protein unc-18 homolog 2) (Munc18-2) (Unc18-2) (Protein unc-18 homolog B) (Unc-18B)
ruditapes2_c1596	vesicle-mediated transport	transport	P	Syntaxin-binding protein 2 (MUSEC1) (Protein unc-18 homolog 2) (Munc18-2) (Unc18-2) (Protein unc-18 homolog B) (Unc-18B)
ruditapes2_c1596	protein transport	transport	P	Syntaxin-binding protein 2 (MUSEC1) (Protein unc-18 homolog 2) (Munc18-2) (Unc18-2) (Protein unc-18 homolog B) (Unc-18B)
ruditapes2_c1596	vesicle docking during exocytosis	transport	P	Syntaxin-binding protein 2 (MUSEC1) (Protein unc-18 homolog 2) (Munc18-2) (Unc18-2) (Protein unc-18 homolog B) (Unc-18B)
ruditapes2_c1596	leukocyte mediated cytotoxicity	other biological processes	P	Syntaxin-binding protein 2 (MUSEC1) (Protein unc-18 homolog 2) (Munc18-2) (Unc18-2) (Protein unc-18 homolog B) (Unc-18B)
ruditapes2_c1596	neutrophil degranulation	transport	P	Syntaxin-binding protein 2 (MUSEC1) (Protein unc-18 homolog 2) (Munc18-2) (Unc18-2) (Protein unc-18 homolog B) (Unc-18B)
ruditapes2_c1596	response to acidity	other biological processes	P	Syntaxin-binding protein 2 (MUSEC1) (Protein unc-18 homolog 2) (Munc18-2) (Unc18-2) (Protein unc-18 homolog B) (Unc-18B)
ruditapes_c14351	transmembrane transport	transport	P	Cyclic nucleotide-gated cation channel alpha-4 (Cyclic nucleotide-gated channel alpha-4) (CNG channel alpha-4) (CNG-4) (CNG4) (Cyclic nucleotide-gated olfactory channel subunit OCNC2)
ruditapes_c14351	response to stimulus	other biological processes	P	Cyclic nucleotide-gated cation channel alpha-4 (Cyclic nucleotide-gated channel alpha-4) (CNG channel alpha-4) (CNG-4) (CNG4) (Cyclic nucleotide-gated olfactory channel subunit OCNC2)
ruditapes_c14351	transport	transport	P	Cyclic nucleotide-gated cation channel alpha-4 (Cyclic nucleotide-gated channel alpha-4) (CNG channel alpha-4) (CNG-4) (CNG4) (Cyclic nucleotide-gated olfactory channel subunit OCNC2)
ruditapes_c14351	ion transport	transport	P	Cyclic nucleotide-gated cation channel alpha-4 (Cyclic nucleotide-gated channel alpha-4) (CNG channel alpha-4) (CNG-4) (CNG4) (Cyclic nucleotide-gated olfactory channel subunit OCNC2)
ruditapes_c14351	sensory perception of smell	other biological processes	P	Cyclic nucleotide-gated cation channel alpha-4 (Cyclic nucleotide-gated channel alpha-4) (CNG channel alpha-4) (CNG-4) (CNG4) (Cyclic nucleotide-gated olfactory channel subunit OCNC2)
ruditapes_c10325	DNA metabolic process	DNA metabolism	P	"DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase II, beta isozyme)"
ruditapes_c10325	DNA topological change	DNA metabolism	P	"DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase II, beta isozyme)"
ruditapes_c1509	lipid metabolic process	other metabolic processes	P	Acyl-CoA desaturase (EC 1.14.19.1) (Delta(9)-desaturase) (Delta-9 desaturase) (Fatty acid desaturase) (Stearoyl-CoA desaturase)
ruditapes_c1509	lipid biosynthetic process	other metabolic processes	P	Acyl-CoA desaturase (EC 1.14.19.1) (Delta(9)-desaturase) (Delta-9 desaturase) (Fatty acid desaturase) (Stearoyl-CoA desaturase)
ruditapes_c3897	lipid metabolic process	other metabolic processes	P	Acyl-CoA desaturase (EC 1.14.19.1) (Delta(9)-desaturase) (Delta-9 desaturase) (Fatty acid desaturase) (Stearoyl-CoA desaturase)
ruditapes_c3897	fatty acid biosynthetic process	other metabolic processes	P	Acyl-CoA desaturase (EC 1.14.19.1) (Delta(9)-desaturase) (Delta-9 desaturase) (Fatty acid desaturase) (Stearoyl-CoA desaturase)
ruditapes_c1509	oxidation reduction	other metabolic processes	P	Acyl-CoA desaturase (EC 1.14.19.1) (Delta(9)-desaturase) (Delta-9 desaturase) (Fatty acid desaturase) (Stearoyl-CoA desaturase)
ruditapes_c1509	fatty acid biosynthetic process	other metabolic processes	P	Acyl-CoA desaturase (EC 1.14.19.1) (Delta(9)-desaturase) (Delta-9 desaturase) (Fatty acid desaturase) (Stearoyl-CoA desaturase)
ruditapes_c3897	oxidation reduction	other metabolic processes	P	Acyl-CoA desaturase (EC 1.14.19.1) (Delta(9)-desaturase) (Delta-9 desaturase) (Fatty acid desaturase) (Stearoyl-CoA desaturase)
ruditapes_c3897	lipid biosynthetic process	other metabolic processes	P	Acyl-CoA desaturase (EC 1.14.19.1) (Delta(9)-desaturase) (Delta-9 desaturase) (Fatty acid desaturase) (Stearoyl-CoA desaturase)
ruditapes_c19790	lipid metabolic process	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c19790	fatty acid metabolic process	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c19790	metabolic process	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c19790	response to insulin stimulus	other biological processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c19790	response to drug	other biological processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c19790	fatty acid beta-oxidation	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c19790	oxidation reduction	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c8750	protein folding	protein metabolism	P	"10 kDa heat shock protein, mitochondrial (Hsp10) (10 kDa chaperonin) (Chaperonin 10) (CPN10)"
ruditapes_c8750	response to stress	stress response	P	"10 kDa heat shock protein, mitochondrial (Hsp10) (10 kDa chaperonin) (Chaperonin 10) (CPN10)"
ruditapes_c13631	positive regulation of gene expression	other metabolic processes	P	Cytochrome P450 3A13 (EC 1.14.14.1) (CYPIIIA13)
ruditapes_c13631	oxidation reduction	other metabolic processes	P	Cytochrome P450 3A13 (EC 1.14.14.1) (CYPIIIA13)
ruditapes_c23146	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase delta (Protein-tyrosine phosphatase delta) (R-PTP-delta) (EC 3.1.3.48)
ruditapes_c23146	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase delta (Protein-tyrosine phosphatase delta) (R-PTP-delta) (EC 3.1.3.48)
ruditapes_c23321	proteolysis	protein metabolism	P	Tripeptidyl-peptidase 2 (TPP-2) (EC 3.4.14.10) (Tripeptidyl aminopeptidase) (Tripeptidyl-peptidase II) (TPP-II)
ruditapes_c31841	signal transduction	signal transduction	P	"[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (EC 2.7.11.2) (PDK P45) (Pyruvate dehydrogenase kinase isoform 2) (PDH kinase 2)"
ruditapes_c31841	peptidyl-histidine phosphorylation	protein metabolism	P	"[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (EC 2.7.11.2) (PDK P45) (Pyruvate dehydrogenase kinase isoform 2) (PDH kinase 2)"
ruditapes_c31841	carbohydrate metabolic process	other metabolic processes	P	"[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (EC 2.7.11.2) (PDK P45) (Pyruvate dehydrogenase kinase isoform 2) (PDH kinase 2)"
ruditapes_c31841	protein amino acid phosphorylation	protein metabolism	P	"[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (EC 2.7.11.2) (PDK P45) (Pyruvate dehydrogenase kinase isoform 2) (PDH kinase 2)"
ruditapes_c31841	phosphorylation	other metabolic processes	P	"[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (EC 2.7.11.2) (PDK P45) (Pyruvate dehydrogenase kinase isoform 2) (PDH kinase 2)"
ruditapes_c31841	glucose metabolic process	other metabolic processes	P	"[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (EC 2.7.11.2) (PDK P45) (Pyruvate dehydrogenase kinase isoform 2) (PDH kinase 2)"
ruditapes_c31841	two-component signal transduction system (phosphorelay)	signal transduction	P	"[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (EC 2.7.11.2) (PDK P45) (Pyruvate dehydrogenase kinase isoform 2) (PDH kinase 2)"
ruditapes_c20499	monovalent inorganic cation transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) ATPase alpha-4 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-4)
ruditapes_c20499	sodium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) ATPase alpha-4 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-4)
ruditapes_c20499	regulation of cellular pH	other biological processes	P	Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) ATPase alpha-4 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-4)
ruditapes_c20499	ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) ATPase alpha-4 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-4)
ruditapes_c20499	ATP biosynthetic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) ATPase alpha-4 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-4)
ruditapes_c20499	potassium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) ATPase alpha-4 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-4)
ruditapes_c20499	metabolic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) ATPase alpha-4 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-4)
ruditapes_c20499	transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) ATPase alpha-4 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-4)
ruditapes_c20499	sperm motility	other biological processes	P	Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) ATPase alpha-4 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-4)
ruditapes_c20499	cation transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha-4 (Na(+)/K(+) ATPase alpha-4 subunit) (EC 3.6.3.9) (Sodium pump subunit alpha-4)
ruditapes_s33347	cellular calcium ion homeostasis	other biological processes	P	Plasma membrane calcium-transporting ATPase 4 (PMCA4) (EC 3.6.3.8) (Plasma membrane calcium ATPase isoform 4) (Plasma membrane calcium pump isoform 4)
ruditapes_s33347	metabolic process	other metabolic processes	P	Plasma membrane calcium-transporting ATPase 4 (PMCA4) (EC 3.6.3.8) (Plasma membrane calcium ATPase isoform 4) (Plasma membrane calcium pump isoform 4)
ruditapes_s33347	transmembrane calcium ion transport	transport	P	Plasma membrane calcium-transporting ATPase 4 (PMCA4) (EC 3.6.3.8) (Plasma membrane calcium ATPase isoform 4) (Plasma membrane calcium pump isoform 4)
ruditapes_s33347	ion transport	transport	P	Plasma membrane calcium-transporting ATPase 4 (PMCA4) (EC 3.6.3.8) (Plasma membrane calcium ATPase isoform 4) (Plasma membrane calcium pump isoform 4)
ruditapes_s33347	transport	transport	P	Plasma membrane calcium-transporting ATPase 4 (PMCA4) (EC 3.6.3.8) (Plasma membrane calcium ATPase isoform 4) (Plasma membrane calcium pump isoform 4)
ruditapes_s33347	calcium ion transport	transport	P	Plasma membrane calcium-transporting ATPase 4 (PMCA4) (EC 3.6.3.8) (Plasma membrane calcium ATPase isoform 4) (Plasma membrane calcium pump isoform 4)
ruditapes_s33347	calcium-mediated signaling	signal transduction	P	Plasma membrane calcium-transporting ATPase 4 (PMCA4) (EC 3.6.3.8) (Plasma membrane calcium ATPase isoform 4) (Plasma membrane calcium pump isoform 4)
ruditapes_s33347	cation transport	transport	P	Plasma membrane calcium-transporting ATPase 4 (PMCA4) (EC 3.6.3.8) (Plasma membrane calcium ATPase isoform 4) (Plasma membrane calcium pump isoform 4)
ruditapes_s33347	ATP biosynthetic process	other metabolic processes	P	Plasma membrane calcium-transporting ATPase 4 (PMCA4) (EC 3.6.3.8) (Plasma membrane calcium ATPase isoform 4) (Plasma membrane calcium pump isoform 4)
ruditapes_c26933	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 2 member 4 (T2R4)
ruditapes_c26933	response to stimulus	other biological processes	P	Taste receptor type 2 member 4 (T2R4)
ruditapes_c26933	signal transduction	signal transduction	P	Taste receptor type 2 member 4 (T2R4)
ruditapes_c26933	sensory perception of taste	other biological processes	P	Taste receptor type 2 member 4 (T2R4)
ruditapes_c9030	positive regulation of neuron apoptosis	death	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	negative regulation of insulin receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	nervous system development	developmental processes	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	positive regulation of apoptosis	death	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	negative regulation of cytokine-mediated signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	homophilic cell adhesion	cell adhesion	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	regulation of synapse structure and activity	cell-cell signaling	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	negative regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	negative regulation of cell proliferation	cell cycle and proliferation	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	cell adhesion	cell adhesion	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	negative regulation of cell projection organization	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	negative regulation of nerve growth factor receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	positive regulation of dendrite morphogenesis	developmental processes	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c9030	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
ruditapes_c2959	response to oxidative stress	stress response	P	Glutathione peroxidase 6 (GPx-6) (GSHPx-6) (EC 1.11.1.9) (Odorant-metabolizing protein RY2D1)
ruditapes_c2959	oxidation reduction	other metabolic processes	P	Glutathione peroxidase 6 (GPx-6) (GSHPx-6) (EC 1.11.1.9) (Odorant-metabolizing protein RY2D1)
ruditapes_c30628	signal transduction	signal transduction	P	Taste receptor type 2 member 13 (T2R13)
ruditapes_c29373	sensory perception of taste	other biological processes	P	Taste receptor type 2 member 13 (T2R13)
ruditapes_c29373	signal transduction	signal transduction	P	Taste receptor type 2 member 13 (T2R13)
ruditapes_c30628	response to stimulus	other biological processes	P	Taste receptor type 2 member 13 (T2R13)
ruditapes_c29373	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 2 member 13 (T2R13)
ruditapes_c29373	response to stimulus	other biological processes	P	Taste receptor type 2 member 13 (T2R13)
ruditapes_c30628	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 2 member 13 (T2R13)
ruditapes_c30628	sensory perception of taste	other biological processes	P	Taste receptor type 2 member 13 (T2R13)
ruditapes_lrc23413	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor)
ruditapes_lrc23413	phosphorylation	other metabolic processes	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor)
ruditapes_lrc23413	protein amino acid phosphorylation	protein metabolism	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor)
ruditapes_lrc23413	actin cytoskeleton reorganization	cell organization and biogenesis	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor)
ruditapes_lrc23413	protein amino acid autophosphorylation	protein metabolism	P	Insulin receptor-related protein (IRR) (EC 2.7.10.1) (IR-related receptor)
ruditapes_c26819	mitotic metaphase plate congression	cell cycle and proliferation	P	Kinetochore protein Spc25
ruditapes_c26819	mitotic metaphase plate congression	cell organization and biogenesis	P	Kinetochore protein Spc25
ruditapes_c26819	meiotic spindle organization	cell organization and biogenesis	P	Kinetochore protein Spc25
ruditapes_c26819	meiotic spindle organization	cell cycle and proliferation	P	Kinetochore protein Spc25
ruditapes_c26819	cell cycle	cell cycle and proliferation	P	Kinetochore protein Spc25
ruditapes_c26819	meiosis	cell cycle and proliferation	P	Kinetochore protein Spc25
ruditapes_c26819	cell division	other biological processes	P	Kinetochore protein Spc25
ruditapes_c26819	meiotic metaphase plate congression	cell cycle and proliferation	P	Kinetochore protein Spc25
ruditapes_c26819	mitotic spindle organization	cell cycle and proliferation	P	Kinetochore protein Spc25
ruditapes_c26819	mitotic spindle organization	cell organization and biogenesis	P	Kinetochore protein Spc25
ruditapes_c26819	mitosis	cell cycle and proliferation	P	Kinetochore protein Spc25
ruditapes_c26819	mitosis	cell organization and biogenesis	P	Kinetochore protein Spc25
ruditapes_c16797	chemotaxis	other biological processes	P	C-C motif chemokine 26 (Eotaxin-3) (Small-inducible cytokine A26)
ruditapes_c16797	positive regulation of Rac GTPase activity	signal transduction	P	C-C motif chemokine 26 (Eotaxin-3) (Small-inducible cytokine A26)
ruditapes_c16797	positive regulation of endothelial cell proliferation	cell cycle and proliferation	P	C-C motif chemokine 26 (Eotaxin-3) (Small-inducible cytokine A26)
ruditapes_c16797	inflammatory response	stress response	P	C-C motif chemokine 26 (Eotaxin-3) (Small-inducible cytokine A26)
ruditapes_c16797	immune response	other biological processes	P	C-C motif chemokine 26 (Eotaxin-3) (Small-inducible cytokine A26)
ruditapes_c16797	positive regulation of cell migration	other biological processes	P	C-C motif chemokine 26 (Eotaxin-3) (Small-inducible cytokine A26)
ruditapes_c16797	positive regulation of actin filament polymerization	protein metabolism	P	C-C motif chemokine 26 (Eotaxin-3) (Small-inducible cytokine A26)
ruditapes_c16797	positive regulation of actin filament polymerization	cell organization and biogenesis	P	C-C motif chemokine 26 (Eotaxin-3) (Small-inducible cytokine A26)
ruditapes_c24880	cell adhesion	cell adhesion	P	Sialic acid-binding Ig-like lectin 13 (Siglec-13)
ruditapes_c26214	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes2_c528	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	LL-diaminopimelate aminotransferase (DAP-AT) (DAP-aminotransferase) (LL-DAP-aminotransferase) (EC 2.6.1.83)
ruditapes_c7084	biosynthetic process	other metabolic processes	P	LL-diaminopimelate aminotransferase (DAP-AT) (DAP-aminotransferase) (LL-DAP-aminotransferase) (EC 2.6.1.83)
ruditapes_c7084	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	LL-diaminopimelate aminotransferase (DAP-AT) (DAP-aminotransferase) (LL-DAP-aminotransferase) (EC 2.6.1.83)
ruditapes2_c528	biosynthetic process	other metabolic processes	P	LL-diaminopimelate aminotransferase (DAP-AT) (DAP-aminotransferase) (LL-DAP-aminotransferase) (EC 2.6.1.83)
ruditapes_c15899	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c15899	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_s33860	glucuronate catabolic process	other metabolic processes	P	Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase) (Uronic isomerase)
ruditapes_c18139	methylation	other metabolic processes	P	Ribosomal protein L11 methyltransferase (L11 Mtase) (EC 2.1.1.-)
ruditapes_c18139	protein amino acid methylation	protein metabolism	P	Ribosomal protein L11 methyltransferase (L11 Mtase) (EC 2.1.1.-)
ruditapes_c29251	oxidation reduction	other metabolic processes	P	Glycosyl hydrolase family 109 protein 2 (EC 3.2.1.-)
ruditapes_c29251	metabolic process	other metabolic processes	P	Glycosyl hydrolase family 109 protein 2 (EC 3.2.1.-)
ruditapes_c31439	transport	transport	P	NADH-quinone oxidoreductase subunit N (EC 1.6.99.5) (NADH dehydrogenase I subunit N) (NDH-1 subunit N)
ruditapes_c31439	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit N (EC 1.6.99.5) (NADH dehydrogenase I subunit N) (NDH-1 subunit N)
ruditapes_c31439	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-quinone oxidoreductase subunit N (EC 1.6.99.5) (NADH dehydrogenase I subunit N) (NDH-1 subunit N)
ruditapes_c4174	cellular amino acid biosynthetic process	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c4174	aromatic amino acid family biosynthetic process	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c4174	phosphorylation	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c20627	tRNA processing	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c20627	tRNA wobble uridine modification	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c29522	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c29522	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c29522	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c29522	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c29522	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_lrc34777	transmembrane transport	transport	P	Potassium channel KOR1 (K(+) outward-rectifying channel 1)
ruditapes_lrc34777	response to cold	stress response	P	Potassium channel KOR1 (K(+) outward-rectifying channel 1)
ruditapes_lrc34777	ion transport	transport	P	Potassium channel KOR1 (K(+) outward-rectifying channel 1)
ruditapes_lrc34777	response to jasmonic acid stimulus	other biological processes	P	Potassium channel KOR1 (K(+) outward-rectifying channel 1)
ruditapes_lrc34777	regulation of transmembrane ion transport	transport	P	Potassium channel KOR1 (K(+) outward-rectifying channel 1)
ruditapes_lrc34777	potassium ion transport	transport	P	Potassium channel KOR1 (K(+) outward-rectifying channel 1)
ruditapes_lrc34777	transport	transport	P	Potassium channel KOR1 (K(+) outward-rectifying channel 1)
ruditapes_lrc34777	response to water deprivation	stress response	P	Potassium channel KOR1 (K(+) outward-rectifying channel 1)
ruditapes_lrc34777	response to abscisic acid stimulus	other biological processes	P	Potassium channel KOR1 (K(+) outward-rectifying channel 1)
ruditapes_c19151	proteolysis	protein metabolism	P	Genome polyprotein 2 [Cleaved into: Helper component proteinase (HC-pro) (EC 3.4.22.45); 70 kDa protein]
ruditapes_c30470	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c30470	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c30470	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c30470	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c30470	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase (HC-pro) (EC 3.4.22.45); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (49 kDa proteinase) (49 kDa-Pro) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Coat protein (CP)]
ruditapes_c22350	potassium ion transport	transport	P	Cation-chloride cotransporter 2 (OsCCC2) (Potassium-chloride cotransporter 2)
ruditapes_c22350	transmembrane transport	transport	P	Cation-chloride cotransporter 2 (OsCCC2) (Potassium-chloride cotransporter 2)
ruditapes_c22350	ion transport	transport	P	Cation-chloride cotransporter 2 (OsCCC2) (Potassium-chloride cotransporter 2)
ruditapes_c22350	transport	transport	P	Cation-chloride cotransporter 2 (OsCCC2) (Potassium-chloride cotransporter 2)
ruditapes_lrc18135	oxidation reduction	other metabolic processes	P	FMN-dependent NADH-azoreductase 2 (EC 1.7.-.-) (Azo-dye reductase 2) (FMN-dependent NADH-azo compound oxidoreductase 2)
ruditapes_c10411	menaquinone biosynthetic process	other metabolic processes	P	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (SEPHCHC synthase) (EC 2.2.1.9) (Menaquinone biosynthesis protein MenD)
ruditapes_c32017	aromatic amino acid family biosynthetic process	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c32017	oxidation reduction	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c32017	cellular amino acid biosynthetic process	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes2_c818	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c818	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c415	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c415	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c415	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c415	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c415	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c818	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c818	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c818	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c21839	rhamnose metabolic process	other metabolic processes	P	Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
ruditapes_c23577	transport	transport	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes_c23577	oxidation reduction	other metabolic processes	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes_c23577	electron transport chain	other metabolic processes	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes_c23577	nitrogen compound metabolic process	other metabolic processes	P	Cytochrome c-552 (EC 1.7.2.2) (Ammonia-forming cytochrome c nitrite reductase) (Cytochrome c nitrite reductase)
ruditapes_c13145	menaquinone biosynthetic process	other metabolic processes	P	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (SEPHCHC synthase) (EC 2.2.1.9) (Menaquinone biosynthesis protein MenD)
ruditapes_lrc7322	biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase 1 (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase 1)
ruditapes_lrc7322	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase 1 (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase 1)
ruditapes_lrc7322	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase 1 (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase 1)
ruditapes_lrc7322	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase 1 (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase 1)
ruditapes2_c1894	translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes2_c1894	valyl-tRNA aminoacylation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes2_c1894	valyl-tRNA aminoacylation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes2_c1894	tRNA aminoacylation for protein translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes2_c1894	tRNA aminoacylation for protein translation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c22321	RNA metabolic process	RNA metabolism	P	Exoribonuclease 2 (EC 3.1.13.1) (Exoribonuclease II) (RNase II) (Ribonuclease II)
ruditapes_c22321	RNA catabolic process	RNA metabolism	P	Exoribonuclease 2 (EC 3.1.13.1) (Exoribonuclease II) (RNase II) (Ribonuclease II)
ruditapes_c27729	gluconeogenesis	other metabolic processes	P	Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI)
ruditapes_c27729	glycolysis	other metabolic processes	P	Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI)
ruditapes_c13659	response to DNA damage stimulus	stress response	P	DNA polymerase IV (Pol IV) (EC 2.7.7.7)
ruditapes_c13659	DNA replication	DNA metabolism	P	DNA polymerase IV (Pol IV) (EC 2.7.7.7)
ruditapes_c13659	DNA repair	stress response	P	DNA polymerase IV (Pol IV) (EC 2.7.7.7)
ruditapes_c13659	DNA repair	DNA metabolism	P	DNA polymerase IV (Pol IV) (EC 2.7.7.7)
ruditapes2_c2679	glucuronate catabolic process	other metabolic processes	P	Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase) (Uronic isomerase)
ruditapes2_c2010	cell cycle	cell cycle and proliferation	P	Chromosome transmission fidelity protein 8
ruditapes2_c2010	sister chromatid cohesion	cell cycle and proliferation	P	Chromosome transmission fidelity protein 8
ruditapes2_c2010	sister chromatid cohesion	cell organization and biogenesis	P	Chromosome transmission fidelity protein 8
ruditapes2_c2010	DNA replication	DNA metabolism	P	Chromosome transmission fidelity protein 8
ruditapes2_c1533	translation	protein metabolism	P	Translation initiation factor IF-2
ruditapes2_c1533	GTP catabolic process	other metabolic processes	P	Translation initiation factor IF-2
ruditapes2_c1533	translational initiation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_c17092	tRNA processing	RNA metabolism	P	tRNA(Ile)-lysidine synthase (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase)
ruditapes_c25672	tRNA processing	RNA metabolism	P	tRNA(Ile)-lysidine synthase (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase)
ruditapes_c24252	"spread of virus within host, cell to cell"	other biological processes	P	Movement protein P1 (Cell-to-cell transport protein)
ruditapes_c24252	transport	transport	P	Movement protein P1 (Cell-to-cell transport protein)
ruditapes_lrc33101	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p88)
ruditapes_lrc33101	viral genome replication	other biological processes	P	RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p88)
ruditapes_lrc33101	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p88)
ruditapes_c22722	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.-)
ruditapes_c23925	proteolysis	protein metabolism	P	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp)
ruditapes_c12878	regulation of translation	protein metabolism	P	Putative transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)
ruditapes_c15154	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c15154	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c15154	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c15154	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c15154	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c24354	nucleotide metabolic process	other metabolic processes	P	Non-canonical purine NTP pyrophosphatase (EC 3.6.1.19) (Non-standard purine NTP pyrophosphatase) (Nucleoside-triphosphate diphosphatase) (Nucleoside-triphosphate pyrophosphatase) (NTPase)
ruditapes_c31905	regulation of cell shape	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c11034	regulation of cell shape	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c11034	peptidoglycan biosynthetic process	other metabolic processes	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c31905	peptidoglycan biosynthetic process	other metabolic processes	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c11034	cell wall organization	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c31905	cell wall organization	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes2_c974	metabolic process	other metabolic processes	P	Probable membrane antigen 3 (Tegument protein)
ruditapes_c28874	interspecies interaction between organisms	other biological processes	P	Viral CASP8 and FADD-like apoptosis regulator (v-CFLAR) (Viral FLICE-inhibitory protein) (v-FLIP)
ruditapes_c28874	proteolysis	protein metabolism	P	Viral CASP8 and FADD-like apoptosis regulator (v-CFLAR) (Viral FLICE-inhibitory protein) (v-FLIP)
ruditapes_c28874	apoptosis	death	P	Viral CASP8 and FADD-like apoptosis regulator (v-CFLAR) (Viral FLICE-inhibitory protein) (v-FLIP)
ruditapes_c28874	regulation of apoptosis	death	P	Viral CASP8 and FADD-like apoptosis regulator (v-CFLAR) (Viral FLICE-inhibitory protein) (v-FLIP)
ruditapes2_c2001	glycine catabolic process	other metabolic processes	P	Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein)
ruditapes_c6783	response to antibiotic	other biological processes	P	Macrolide export ATP-binding/permease protein MacB 2 (EC 3.6.3.-)
ruditapes_c6783	ATP catabolic process	other metabolic processes	P	Macrolide export ATP-binding/permease protein MacB 2 (EC 3.6.3.-)
ruditapes_c6783	transport	transport	P	Macrolide export ATP-binding/permease protein MacB 2 (EC 3.6.3.-)
ruditapes_c12036	electron transport chain	other metabolic processes	P	Electron transport complex protein RnfD
ruditapes_c12036	transport	transport	P	Electron transport complex protein RnfD
ruditapes_c16332	pyridine nucleotide biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c16332	nicotinate nucleotide biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c16332	NAD biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c11202	apoptosis	death	P	Tax1-binding protein 1 homolog (Liver regeneration-related protein LRRG004)
ruditapes_c11202	anti-apoptosis	death	P	Tax1-binding protein 1 homolog (Liver regeneration-related protein LRRG004)
ruditapes_c18502	oxidation reduction	other metabolic processes	P	Aldehyde dehydrogenase family 8 member A1 (EC 1.2.1.-)
ruditapes_c18502	metabolic process	other metabolic processes	P	Aldehyde dehydrogenase family 8 member A1 (EC 1.2.1.-)
ruditapes_c10381	cell proliferation	cell cycle and proliferation	P	Serrate RNA effector molecule homolog (Arsenite-resistance protein 2)
ruditapes_c10381	primary microRNA processing	RNA metabolism	P	Serrate RNA effector molecule homolog (Arsenite-resistance protein 2)
ruditapes_c10381	gene silencing by RNA	other metabolic processes	P	Serrate RNA effector molecule homolog (Arsenite-resistance protein 2)
ruditapes_c5143	biological_process	other biological processes	P	Cornifelin homolog
ruditapes2_c1959	biological_process	other biological processes	P	Tctex1 domain-containing protein 1
ruditapes_c28775	response to DNA damage stimulus	stress response	P	DNA damage-binding protein 2 (Damage-specific DNA-binding protein 2)
ruditapes_c28775	DNA repair	stress response	P	DNA damage-binding protein 2 (Damage-specific DNA-binding protein 2)
ruditapes_c28775	DNA repair	DNA metabolism	P	DNA damage-binding protein 2 (Damage-specific DNA-binding protein 2)
ruditapes_c23149	"RNA interference, targeting of mRNA for destruction"	other metabolic processes	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c23149	"RNA interference, targeting of mRNA for destruction"	cell organization and biogenesis	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c23149	tRNA processing	RNA metabolism	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c23149	phosphorylation	other metabolic processes	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c23149	mRNA processing	RNA metabolism	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c23149	"RNA interference, siRNA loading onto RISC"	other metabolic processes	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c23149	"RNA interference, siRNA loading onto RISC"	cell organization and biogenesis	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c23149	"tRNA splicing, via endonucleolytic cleavage and ligation"	RNA metabolism	P	Polyribonucleotide 5'-hydroxyl-kinase Clp1 (EC 2.7.1.78) (Polyadenylation factor Clp1) (Polynucleotide kinase Clp1) (Pre-mRNA cleavage complex II protein Clp1)
ruditapes_c12273	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Biogenesis of lysosome-related organelles complex 1 subunit 2 (BLOC-1 subunit 2)
ruditapes_c16375	oxidation reduction	other metabolic processes	P	Hydroxysteroid dehydrogenase-like protein 2 (EC 1.-.-.-)
ruditapes_c16375	metabolic process	other metabolic processes	P	Hydroxysteroid dehydrogenase-like protein 2 (EC 1.-.-.-)
ruditapes_c9614	multicellular organismal development	developmental processes	P	Dapper 1
ruditapes_c9614	Wnt receptor signaling pathway	signal transduction	P	Dapper 1
ruditapes_lrc31756	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_c4591	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc36863	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4406	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4758	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc26356	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc31756	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_c4591	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4077	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc5863	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc31756	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc39070	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc26356	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc26356	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc5863	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc3791	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc3791	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc39070	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc5044	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc31756	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4758	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc33668	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4406	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc3791	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc5044	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc3791	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc5044	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4077	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc39070	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4077	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc39070	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc3791	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc32142	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc32142	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc36863	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc5863	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4077	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc5863	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc32142	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4758	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_c4591	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_c4591	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc32142	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc31756	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc33668	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc5044	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4758	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4758	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc33668	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc33668	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4406	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc33668	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc26356	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4077	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc5863	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc32142	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc36863	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4406	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc5044	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc26356	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc36863	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_c4591	protein targeting to ER	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes2_lrc4406	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc39070	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc36863	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_c26771	cell adhesion	cell adhesion	P	Cell adhesion molecule 4 (Immunoglobulin superfamily member 4C) (IgSF4C)
ruditapes_c7157	response to metal ion	other biological processes	P	Protein CutA homolog
ruditapes_c8565	metabolic process	other metabolic processes	P	HD domain-containing protein 2
ruditapes_c12497	signal transduction	signal transduction	P	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform (PP2A subunit B isoform B55-delta) (PP2A subunit B isoform PR55-delta) (PP2A subunit B isoform R2-delta) (PP2A subunit B isoform delta)
ruditapes_c12497	exit from mitosis	cell cycle and proliferation	P	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform (PP2A subunit B isoform B55-delta) (PP2A subunit B isoform PR55-delta) (PP2A subunit B isoform R2-delta) (PP2A subunit B isoform delta)
ruditapes_c12497	mitosis	cell cycle and proliferation	P	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform (PP2A subunit B isoform B55-delta) (PP2A subunit B isoform PR55-delta) (PP2A subunit B isoform R2-delta) (PP2A subunit B isoform delta)
ruditapes_c12497	mitosis	cell organization and biogenesis	P	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform (PP2A subunit B isoform B55-delta) (PP2A subunit B isoform PR55-delta) (PP2A subunit B isoform R2-delta) (PP2A subunit B isoform delta)
ruditapes_c12497	cell division	other biological processes	P	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform (PP2A subunit B isoform B55-delta) (PP2A subunit B isoform PR55-delta) (PP2A subunit B isoform R2-delta) (PP2A subunit B isoform delta)
ruditapes_c12497	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform (PP2A subunit B isoform B55-delta) (PP2A subunit B isoform PR55-delta) (PP2A subunit B isoform R2-delta) (PP2A subunit B isoform delta)
ruditapes_c743	pathogenesis	other biological processes	P	Natterin-4 (EC 3.4.-.-)
ruditapes_c13679	pathogenesis	other biological processes	P	Natterin-4 (EC 3.4.-.-)
ruditapes_c15165	positive regulation of phagocytosis	transport	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c15165	positive regulation of phagocytosis	cell organization and biogenesis	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c20771	positive regulation of phagocytosis	transport	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c20771	positive regulation of phagocytosis	cell organization and biogenesis	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c15165	killing by host of symbiont cells	other biological processes	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c24073	killing by host of symbiont cells	other biological processes	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c15165	"complement activation, classical pathway"	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c15165	"complement activation, classical pathway"	protein metabolism	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c24073	"complement activation, classical pathway"	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c24073	"complement activation, classical pathway"	protein metabolism	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c24073	positive regulation of phagocytosis	transport	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c24073	positive regulation of phagocytosis	cell organization and biogenesis	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c20771	innate immune response	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c15165	"complement activation, lectin pathway"	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c15165	"complement activation, lectin pathway"	protein metabolism	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c24073	innate immune response	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c15165	defense response to Gram-positive bacterium	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c24073	defense response to Gram-positive bacterium	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c15165	innate immune response	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c20771	defense response to Gram-positive bacterium	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c20771	"complement activation, classical pathway"	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c20771	"complement activation, classical pathway"	protein metabolism	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c24073	"complement activation, lectin pathway"	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c24073	"complement activation, lectin pathway"	protein metabolism	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c20771	killing by host of symbiont cells	other biological processes	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c20771	"complement activation, lectin pathway"	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c20771	"complement activation, lectin pathway"	protein metabolism	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes2_c1728	"complement activation, classical pathway"	protein metabolism	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes2_c1728	"complement activation, lectin pathway"	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes2_c1728	"complement activation, lectin pathway"	protein metabolism	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes2_c1728	innate immune response	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes2_c1728	"complement activation, classical pathway"	stress response	P	Mannose-binding protein C (MBP-C) (MBP1) (Mannan-binding protein) (Mannose-binding lectin)
ruditapes_c24555	positive regulation of cytokine secretion	transport	P	C-type lectin domain family 4 member E (C-type lectin superfamily member 9) (Macrophage-inducible C-type lectin)
ruditapes_c24555	immune response	other biological processes	P	C-type lectin domain family 4 member E (C-type lectin superfamily member 9) (Macrophage-inducible C-type lectin)
ruditapes_c13205	translation	protein metabolism	P	30S ribosomal protein S12
ruditapes_c21143	cellular metabolic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase)
ruditapes_c21143	methionine biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase)
ruditapes_c21143	cellular amino acid biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase)
ruditapes_c21143	cellular biosynthetic process	other metabolic processes	P	Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase)
ruditapes_c28510	biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes_c28510	coenzyme A biosynthetic process	other metabolic processes	P	Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT)
ruditapes_c31933	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c31933	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c31933	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c31933	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c31933	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc13177	mismatch repair	stress response	P	MutS2 protein
ruditapes_lrc13177	mismatch repair	DNA metabolism	P	MutS2 protein
ruditapes_lrc13177	maintenance of fidelity during DNA-dependent DNA replication	DNA metabolism	P	MutS2 protein
ruditapes_c7156	oxidation reduction	other metabolic processes	P	Ferredoxin--NADP reductase (FNR) (Fd-NADP(+) reductase) (EC 1.18.1.2)
ruditapes_c18371	porphyrin biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c18371	heme biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c14896	chromatin modification	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 1 (TAFII250)
ruditapes_c14896	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 1 (TAFII250)
ruditapes_c14896	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 1 (TAFII250)
ruditapes_c7382	cell wall organization	cell organization and biogenesis	P	Probable mannan synthase 3 (EC 2.4.1.-) (Cellulose synthase-like protein A3) (OsCslA3)
ruditapes_lrc25866	very-long-chain fatty acid biosynthetic process	other metabolic processes	P	"Uncharacterized CRM domain-containing protein At3g25440, chloroplastic"
ruditapes_lrc34023	translation	protein metabolism	P	40S ribosomal protein S29
ruditapes_c19870	biological_process	other biological processes	P	Protein GAMETE EXPRESSED 1
ruditapes_c19255	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	apoptosis	death	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	viral reproduction	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	ion transport	transport	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	transformation of host cell by virus	other biological processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	evasion by virus of host immune response	stress response	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	metabolic process	other metabolic processes	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c19255	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
ruditapes_c25360	GPI anchor metabolic process	other metabolic processes	P	Post-GPI attachment to proteins factor 3 (PER1-like domain-containing protein 1)
ruditapes_c25360	GPI anchor biosynthetic process	protein metabolism	P	Post-GPI attachment to proteins factor 3 (PER1-like domain-containing protein 1)
ruditapes_lrc7221	biological_process	other biological processes	P	Protein SPT2 homolog (SPT2 domain-containing protein 1)
ruditapes_c537	snRNA processing	RNA metabolism	P	Integrator complex subunit 12 (Int12) (PHD finger protein 22)
ruditapes_c12803	GTP catabolic process	other metabolic processes	P	Tubulin alpha-3 chain (Alpha-tubulin 3)
ruditapes_c12803	microtubule-based process	other biological processes	P	Tubulin alpha-3 chain (Alpha-tubulin 3)
ruditapes_c12803	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-3 chain (Alpha-tubulin 3)
ruditapes_c12803	microtubule-based movement	other biological processes	P	Tubulin alpha-3 chain (Alpha-tubulin 3)
ruditapes_lrc34111	cullin deneddylation	protein metabolism	P	COP9 signalosome complex subunit 4 (SGN4) (Signalosome subunit 4) (JAB1-containing signalosome subunit 4)
ruditapes_c12498	ubiquinone biosynthetic process	other metabolic processes	P	"Ubiquinone biosynthesis protein COQ9, mitochondrial"
ruditapes_c30671	RNA splicing	RNA metabolism	P	SURP and G-patch domain-containing protein 1 (Splicing factor 4)
ruditapes_c30671	RNA processing	RNA metabolism	P	SURP and G-patch domain-containing protein 1 (Splicing factor 4)
ruditapes_c30671	biological_process	other biological processes	P	SURP and G-patch domain-containing protein 1 (Splicing factor 4)
ruditapes_c30671	mRNA processing	RNA metabolism	P	SURP and G-patch domain-containing protein 1 (Splicing factor 4)
ruditapes2_c2354	cytoskeleton organization	cell organization and biogenesis	P	Profilin
ruditapes2_c2354	actin cytoskeleton organization	cell organization and biogenesis	P	Profilin
ruditapes_c22983	transport	transport	P	Neuronal acetylcholine receptor subunit alpha-9-II (Nicotinic acetylcholine receptor subunit alpha-9-II) (NACHR alpha-9-II)
ruditapes_c22983	ion transport	transport	P	Neuronal acetylcholine receptor subunit alpha-9-II (Nicotinic acetylcholine receptor subunit alpha-9-II) (NACHR alpha-9-II)
ruditapes_c20909	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c20909	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c20909	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c20909	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c20670	ribosome biogenesis	other biological processes	P	GTPase Der (GTP-binding protein EngA)
ruditapes_c22110	translation	protein metabolism	P	50S ribosomal protein L3
ruditapes2_c5391	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c5391	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c5391	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c5391	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c5391	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c5391	metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c5391	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c5391	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c25824	nitrogen compound metabolic process	other metabolic processes	P	Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC 2.3.1.-)
ruditapes_c25824	lipoprotein biosynthetic process	other metabolic processes	P	Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC 2.3.1.-)
ruditapes_lrc11499	protein metabolic process	protein metabolism	P	Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase)
ruditapes_lrc11499	proteolysis	protein metabolism	P	Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase)
ruditapes_c39653	defense response to bacterium	stress response	P	Pilosulin-3
ruditapes_c11910	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c11910	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7)
ruditapes_s39613	DNA replication	DNA metabolism	P	Probable primase (DNA replication protein UL70)
ruditapes_s36813	biological_process	other biological processes	P	Tetratricopeptide repeat protein GNN (TPR repeat protein GNN) (Grp94-neighboring nucleotidase)
ruditapes2_c1641	metabolic process	other metabolic processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (Deoxycytidine deaminase)
ruditapes2_c1641	negative regulation of transposition	other biological processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (Deoxycytidine deaminase)
ruditapes2_c1641	response to virus	other biological processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (Deoxycytidine deaminase)
ruditapes2_c1641	DNA cytosine deamination	DNA metabolism	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (Deoxycytidine deaminase)
ruditapes_c12002	DNA cytosine deamination	DNA metabolism	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (Deoxycytidine deaminase)
ruditapes_c12002	metabolic process	other metabolic processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (Deoxycytidine deaminase)
ruditapes_c12002	response to virus	other biological processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (Deoxycytidine deaminase)
ruditapes_c12002	negative regulation of transposition	other biological processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (Deoxycytidine deaminase)
ruditapes2_c1692	transport	transport	P	"Cytochrome b-c1 complex subunit Rieske, mitochondrial (EC 1.10.2.2) (Complex III subunit 5) (Cytochrome b-c1 complex subunit 5) (Rieske iron-sulfur protein) (RISP) (Ubiquinol-cytochrome c reductase iron-sulfur subunit) [Cleaved into: Cytochrome b-c1 complex subunit 11 (Complex III subunit IX) (Ubiquinol-cytochrome c reductase 8 kDa protein)]"
ruditapes2_c1692	electron transport chain	other metabolic processes	P	"Cytochrome b-c1 complex subunit Rieske, mitochondrial (EC 1.10.2.2) (Complex III subunit 5) (Cytochrome b-c1 complex subunit 5) (Rieske iron-sulfur protein) (RISP) (Ubiquinol-cytochrome c reductase iron-sulfur subunit) [Cleaved into: Cytochrome b-c1 complex subunit 11 (Complex III subunit IX) (Ubiquinol-cytochrome c reductase 8 kDa protein)]"
ruditapes2_c1692	oxidation reduction	other metabolic processes	P	"Cytochrome b-c1 complex subunit Rieske, mitochondrial (EC 1.10.2.2) (Complex III subunit 5) (Cytochrome b-c1 complex subunit 5) (Rieske iron-sulfur protein) (RISP) (Ubiquinol-cytochrome c reductase iron-sulfur subunit) [Cleaved into: Cytochrome b-c1 complex subunit 11 (Complex III subunit IX) (Ubiquinol-cytochrome c reductase 8 kDa protein)]"
ruditapes_c22773	ER to Golgi vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 4 (Synbindin)
ruditapes_c22773	dendrite development	developmental processes	P	Trafficking protein particle complex subunit 4 (Synbindin)
ruditapes_c22773	dendrite development	cell organization and biogenesis	P	Trafficking protein particle complex subunit 4 (Synbindin)
ruditapes_c22773	transport	transport	P	Trafficking protein particle complex subunit 4 (Synbindin)
ruditapes_c22773	vesicle-mediated transport	transport	P	Trafficking protein particle complex subunit 4 (Synbindin)
ruditapes_c15372	oxidation reduction	other metabolic processes	P	Multicopper oxidase mco (EC 1.-.-.-)
ruditapes_c21262	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase 24 (EC 3.2.1.4) (Endo-1,4-beta glucanase 24)"
ruditapes_c21262	metabolic process	other metabolic processes	P	"Endoglucanase 24 (EC 3.2.1.4) (Endo-1,4-beta glucanase 24)"
ruditapes_c21262	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase 24 (EC 3.2.1.4) (Endo-1,4-beta glucanase 24)"
ruditapes_c21262	cell wall organization	cell organization and biogenesis	P	"Endoglucanase 24 (EC 3.2.1.4) (Endo-1,4-beta glucanase 24)"
ruditapes_c21262	cellulose catabolic process	other metabolic processes	P	"Endoglucanase 24 (EC 3.2.1.4) (Endo-1,4-beta glucanase 24)"
ruditapes_s40145	"transcription, DNA-dependent"	RNA metabolism	P	Homeobox-leucine zipper protein ROC8 (GLABRA 2-like homeobox protein 8) (HD-ZIP protein ROC8) (Homeodomain transcription factor ROC8) (Protein RICE OUTERMOST CELL-SPECIFIC 8)
ruditapes_s40145	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox-leucine zipper protein ROC8 (GLABRA 2-like homeobox protein 8) (HD-ZIP protein ROC8) (Homeodomain transcription factor ROC8) (Protein RICE OUTERMOST CELL-SPECIFIC 8)
ruditapes_c7797	"transcription, DNA-dependent"	RNA metabolism	P	Probable JmjC domain-containing histone demethylation protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C)
ruditapes_c7797	chromatin modification	cell organization and biogenesis	P	Probable JmjC domain-containing histone demethylation protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C)
ruditapes_c7797	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable JmjC domain-containing histone demethylation protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C)
ruditapes_c7797	oxidation reduction	other metabolic processes	P	Probable JmjC domain-containing histone demethylation protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C)
ruditapes_c13378	positive regulation of protein kinase B signaling cascade	signal transduction	P	Uncharacterized family 31 glucosidase KIAA1161 (EC 3.2.1.-)
ruditapes_c13378	carbohydrate metabolic process	other metabolic processes	P	Uncharacterized family 31 glucosidase KIAA1161 (EC 3.2.1.-)
ruditapes_c13378	metabolic process	other metabolic processes	P	Uncharacterized family 31 glucosidase KIAA1161 (EC 3.2.1.-)
ruditapes_c13378	skeletal muscle fiber development	developmental processes	P	Uncharacterized family 31 glucosidase KIAA1161 (EC 3.2.1.-)
ruditapes_c13378	positive regulation of insulin-like growth factor receptor signaling pathway	signal transduction	P	Uncharacterized family 31 glucosidase KIAA1161 (EC 3.2.1.-)
ruditapes_c22192	neural tube closure	developmental processes	P	E3 ubiquitin-protein ligase HECTD1 (EC 6.3.2.-) (HECT domain-containing protein 1) (Protein open mind)
ruditapes_c22192	protein modification process	protein metabolism	P	E3 ubiquitin-protein ligase HECTD1 (EC 6.3.2.-) (HECT domain-containing protein 1) (Protein open mind)
ruditapes_c22192	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase HECTD1 (EC 6.3.2.-) (HECT domain-containing protein 1) (Protein open mind)
ruditapes_c6202	biological_process	other biological processes	P	Transmembrane and coiled-coil domains protein 1
ruditapes_c27996	G-protein coupled receptor protein signaling pathway	signal transduction	P	Attractin-like protein 1
ruditapes_c17864	glucuronate catabolic process	other metabolic processes	P	Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydro-lyase)
ruditapes_c8849	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c4312	phosphorylation	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_c4312	metabolic process	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_c12655	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_c12655	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_c12655	tRNA aminoacylation for protein translation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_c12655	tRNA aminoacylation for protein translation	RNA metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_c12655	translation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_lrc20076	cell division	other biological processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_lrc20076	peptidoglycan biosynthetic process	other metabolic processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_lrc20076	cell wall organization	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_lrc20076	regulation of cell shape	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_lrc20076	cell cycle	cell cycle and proliferation	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c20433	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c20433	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes2_c3621	carbohydrate metabolic process	other metabolic processes	P	UPF0271 protein PPA0282
ruditapes_c7773	potassium ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c12751	potassium ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c12751	ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c7773	ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c12751	transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c7773	transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes2_lrc4726	cell division	other biological processes	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes2_lrc4726	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes2_lrc4726	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes2_lrc4726	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes2_lrc4726	peptidoglycan-based cell wall biogenesis	other biological processes	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes2_lrc4726	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes2_lrc4726	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase)
ruditapes_c17494	porphyrin biosynthetic process	other metabolic processes	P	Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37)
ruditapes2_c2096	adenine catabolic process	other metabolic processes	P	Adenine deaminase 2 (Adenase 2) (Adenine aminase 2) (EC 3.5.4.2)
ruditapes_c2742	adenine catabolic process	other metabolic processes	P	Adenine deaminase 2 (Adenase 2) (Adenine aminase 2) (EC 3.5.4.2)
ruditapes_c24937	cellular amino acid metabolic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c24937	cellular amino acid biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c24937	oxidation reduction	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c24937	arginine biosynthetic process	other metabolic processes	P	N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase)
ruditapes_c6294	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_c27716	base-excision repair	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c27716	base-excision repair	DNA metabolism	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c27716	metabolic process	other metabolic processes	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c27716	DNA repair	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c27716	DNA repair	DNA metabolism	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c27716	response to DNA damage stimulus	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c27716	nucleotide-excision repair	stress response	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c27716	nucleotide-excision repair	DNA metabolism	P	Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18)
ruditapes_c23360	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c23360	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_lrc32843	nucleoside metabolic process	other metabolic processes	P	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (MTA/SAH nucleosidase) (MTAN) (EC 3.2.2.9) (5'-methylthioadenosine nucleosidase) (MTA nucleosidase) (S-adenosylhomocysteine nucleosidase) (AdoHcy nucleosidase) (SAH nucleosidase) (SRH nucleosidase)
ruditapes_lrc32843	cellular amino acid biosynthetic process	other metabolic processes	P	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (MTA/SAH nucleosidase) (MTAN) (EC 3.2.2.9) (5'-methylthioadenosine nucleosidase) (MTA nucleosidase) (S-adenosylhomocysteine nucleosidase) (AdoHcy nucleosidase) (SAH nucleosidase) (SRH nucleosidase)
ruditapes_lrc32843	methionine salvage	other metabolic processes	P	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (MTA/SAH nucleosidase) (MTAN) (EC 3.2.2.9) (5'-methylthioadenosine nucleosidase) (MTA nucleosidase) (S-adenosylhomocysteine nucleosidase) (AdoHcy nucleosidase) (SAH nucleosidase) (SRH nucleosidase)
ruditapes_lrc32843	methionine biosynthetic process	other metabolic processes	P	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (MTA/SAH nucleosidase) (MTAN) (EC 3.2.2.9) (5'-methylthioadenosine nucleosidase) (MTA nucleosidase) (S-adenosylhomocysteine nucleosidase) (AdoHcy nucleosidase) (SAH nucleosidase) (SRH nucleosidase)
ruditapes_lrc32843	nucleoside catabolic process	other metabolic processes	P	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (MTA/SAH nucleosidase) (MTAN) (EC 3.2.2.9) (5'-methylthioadenosine nucleosidase) (MTA nucleosidase) (S-adenosylhomocysteine nucleosidase) (AdoHcy nucleosidase) (SAH nucleosidase) (SRH nucleosidase)
ruditapes_c10774	cation transport	transport	P	"Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)"
ruditapes_c10774	calcium ion transport	transport	P	"Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)"
ruditapes_c10774	transmembrane calcium ion transport	transport	P	"Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)"
ruditapes_c10774	ATP biosynthetic process	other metabolic processes	P	"Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)"
ruditapes_c10774	metabolic process	other metabolic processes	P	"Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)"
ruditapes_c10774	ion transport	transport	P	"Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)"
ruditapes_c10774	transport	transport	P	"Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)"
ruditapes_c21105	response to reactive oxygen species	stress response	P	Xanthine dehydrogenase (EC 1.17.1.4)
ruditapes_c21105	xanthine metabolic process	other metabolic processes	P	Xanthine dehydrogenase (EC 1.17.1.4)
ruditapes_c21105	oxidation reduction	other metabolic processes	P	Xanthine dehydrogenase (EC 1.17.1.4)
ruditapes_c21105	superoxide anion generation	other metabolic processes	P	Xanthine dehydrogenase (EC 1.17.1.4)
ruditapes_c21105	response to water deprivation	stress response	P	Xanthine dehydrogenase (EC 1.17.1.4)
ruditapes_c6937	protein amino acid phosphorylation	protein metabolism	P	Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase (OsCCaMK) (EC 2.7.11.17)
ruditapes_c6937	phosphorylation	other metabolic processes	P	Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase (OsCCaMK) (EC 2.7.11.17)
ruditapes_c22796	biological_process	other biological processes	P	Cingulin-like protein 1 (Junction-associated coiled-coil protein)
ruditapes_c9777	signal transduction	signal transduction	P	Fibrinogen C domain-containing protein 1-A
ruditapes_c27440	response to oxidative stress	stress response	P	Serum paraoxonase/arylesterase 2 (PON 2) (EC 3.1.1.2) (EC 3.1.1.81) (Aromatic esterase 2) (A-esterase 2) (Serum aryldialkylphosphatase 2)
ruditapes_c10790	meiosis	cell cycle and proliferation	P	Meiosis-specific nuclear structural protein 1
ruditapes_c12695	xenobiotic metabolic process	other metabolic processes	P	Glutathione S-transferase omega-2 (GSTO-2) (EC 2.5.1.18) (Glutathione S-transferase omega 2-2) (GSTO 2-2) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2)
ruditapes_c12695	oxidation reduction	other metabolic processes	P	Glutathione S-transferase omega-2 (GSTO-2) (EC 2.5.1.18) (Glutathione S-transferase omega 2-2) (GSTO 2-2) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2)
ruditapes_c12695	metabolic process	other metabolic processes	P	Glutathione S-transferase omega-2 (GSTO-2) (EC 2.5.1.18) (Glutathione S-transferase omega 2-2) (GSTO 2-2) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2)
ruditapes_c12695	L-ascorbic acid metabolic process	other metabolic processes	P	Glutathione S-transferase omega-2 (GSTO-2) (EC 2.5.1.18) (Glutathione S-transferase omega 2-2) (GSTO 2-2) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2)
ruditapes_c26948	methylation	other metabolic processes	P	tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A (EC 2.1.1.220) (tRNA(m1A58)-methyltransferase subunit TRMT61A) (tRNA(m1A58)MTase subunit TRMT61A)
ruditapes_c26948	tRNA processing	RNA metabolism	P	tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A (EC 2.1.1.220) (tRNA(m1A58)-methyltransferase subunit TRMT61A) (tRNA(m1A58)MTase subunit TRMT61A)
ruditapes_c26948	tRNA methylation	RNA metabolism	P	tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A (EC 2.1.1.220) (tRNA(m1A58)-methyltransferase subunit TRMT61A) (tRNA(m1A58)MTase subunit TRMT61A)
ruditapes_c9923	apoptosis	death	P	Endophilin-B1 (SH3 domain-containing GRB2-like protein B1)
ruditapes_c9923	filopodium assembly	cell organization and biogenesis	P	Endophilin-B1 (SH3 domain-containing GRB2-like protein B1)
ruditapes_c9923	signal transduction	signal transduction	P	Endophilin-B1 (SH3 domain-containing GRB2-like protein B1)
ruditapes_c27248	central nervous system development	developmental processes	P	Acetyl-coenzyme A transporter 1 (AT-1) (Acetyl-CoA transporter 1) (Solute carrier family 33 member 1)
ruditapes_c27248	acetyl-CoA transport	transport	P	Acetyl-coenzyme A transporter 1 (AT-1) (Acetyl-CoA transporter 1) (Solute carrier family 33 member 1)
ruditapes_c27248	transport	transport	P	Acetyl-coenzyme A transporter 1 (AT-1) (Acetyl-CoA transporter 1) (Solute carrier family 33 member 1)
ruditapes_c7902	electron transport chain	other metabolic processes	P	"Succinate dehydrogenase [ubiquinone] cytochrome b small subunit A, mitochondrial (CybS-A) (Succinate dehydrogenase complex subunit D-A) (Succinate-ubiquinone oxidoreductase cytochrome b small subunit A) (Succinate-ubiquinone reductase membrane anchor subunit A)"
ruditapes_c7902	tricarboxylic acid cycle	other metabolic processes	P	"Succinate dehydrogenase [ubiquinone] cytochrome b small subunit A, mitochondrial (CybS-A) (Succinate dehydrogenase complex subunit D-A) (Succinate-ubiquinone oxidoreductase cytochrome b small subunit A) (Succinate-ubiquinone reductase membrane anchor subunit A)"
ruditapes_c7902	transport	transport	P	"Succinate dehydrogenase [ubiquinone] cytochrome b small subunit A, mitochondrial (CybS-A) (Succinate dehydrogenase complex subunit D-A) (Succinate-ubiquinone oxidoreductase cytochrome b small subunit A) (Succinate-ubiquinone reductase membrane anchor subunit A)"
ruditapes_c11590	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase [NADP(+)] A (EC 1.1.1.2) (Aldehyde reductase-A) (Aldo-keto reductase family 1 member A1-A)
ruditapes_c26754	homophilic cell adhesion	cell adhesion	P	Cadherin-related family member 1 (Photoreceptor cadherin) (prCAD) (Protocadherin-21)
ruditapes_c26754	cell adhesion	cell adhesion	P	Cadherin-related family member 1 (Photoreceptor cadherin) (prCAD) (Protocadherin-21)
ruditapes_c36861	translation	protein metabolism	P	"28S ribosomal protein S14, mitochondrial (MRP-S14) (S14mt)"
ruditapes_c2434	translation	protein metabolism	P	"28S ribosomal protein S14, mitochondrial (MRP-S14) (S14mt)"
ruditapes2_c510	translation	protein metabolism	P	"28S ribosomal protein S14, mitochondrial (MRP-S14) (S14mt)"
ruditapes_c29914	tRNA processing	RNA metabolism	P	"tRNA(Ile)-lysidine synthase, chloroplastic (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase)"
ruditapes_c17937	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta)
ruditapes_c22383	cytochrome complex assembly	cell organization and biogenesis	P	Cytochrome c biogenesis protein ccs1
ruditapes_c8086	protein amino acid phosphorylation	protein metabolism	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c7830	protein amino acid phosphorylation	protein metabolism	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c24723	myosin II filament assembly or disassembly	cell organization and biogenesis	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c24723	cytokinesis	other biological processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c8086	cytokinesis	other biological processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c24723	phosphorylation	other metabolic processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c24723	peptidyl-threonine phosphorylation	protein metabolism	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c7830	myosin II filament assembly or disassembly	cell organization and biogenesis	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c7830	regulation of sorocarp development	stress response	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c7830	regulation of sorocarp development	developmental processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c7830	peptidyl-serine modification	protein metabolism	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c8086	regulation of sorocarp development	stress response	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c8086	regulation of sorocarp development	developmental processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c24723	peptidyl-serine modification	protein metabolism	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c8086	phosphorylation	other metabolic processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c24723	regulation of sorocarp development	developmental processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c8086	sorocarp morphogenesis	stress response	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c8086	sorocarp morphogenesis	developmental processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c8086	peptidyl-serine modification	protein metabolism	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c7830	sorocarp morphogenesis	developmental processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c8086	peptidyl-threonine phosphorylation	protein metabolism	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c7830	phosphorylation	other metabolic processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c8086	myosin II filament assembly or disassembly	cell organization and biogenesis	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c24723	regulation of sorocarp development	stress response	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c7830	peptidyl-threonine phosphorylation	protein metabolism	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c24723	sorocarp morphogenesis	stress response	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c24723	sorocarp morphogenesis	developmental processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c24723	protein amino acid phosphorylation	protein metabolism	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c7830	cytokinesis	other biological processes	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c7830	sorocarp morphogenesis	stress response	P	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)
ruditapes_c27937	"negative regulation of short-day photoperiodism, flowering"	developmental processes	P	Probable lysine-specific demethylase ELF6 (EC 1.14.11.-) (Early flowering 6) (Jumonji domain-containing protein 11) (Probable lysine-specific histone demethylase ELF6)
ruditapes_c27937	histone H3-K9 demethylation	protein metabolism	P	Probable lysine-specific demethylase ELF6 (EC 1.14.11.-) (Early flowering 6) (Jumonji domain-containing protein 11) (Probable lysine-specific histone demethylase ELF6)
ruditapes_c27937	histone H3-K9 demethylation	cell organization and biogenesis	P	Probable lysine-specific demethylase ELF6 (EC 1.14.11.-) (Early flowering 6) (Jumonji domain-containing protein 11) (Probable lysine-specific histone demethylase ELF6)
ruditapes_c27937	oxidation reduction	other metabolic processes	P	Probable lysine-specific demethylase ELF6 (EC 1.14.11.-) (Early flowering 6) (Jumonji domain-containing protein 11) (Probable lysine-specific histone demethylase ELF6)
ruditapes_c27937	"transcription, DNA-dependent"	RNA metabolism	P	Probable lysine-specific demethylase ELF6 (EC 1.14.11.-) (Early flowering 6) (Jumonji domain-containing protein 11) (Probable lysine-specific histone demethylase ELF6)
ruditapes_c27937	unidimensional cell growth	other biological processes	P	Probable lysine-specific demethylase ELF6 (EC 1.14.11.-) (Early flowering 6) (Jumonji domain-containing protein 11) (Probable lysine-specific histone demethylase ELF6)
ruditapes_c27937	response to brassinosteroid stimulus	other biological processes	P	Probable lysine-specific demethylase ELF6 (EC 1.14.11.-) (Early flowering 6) (Jumonji domain-containing protein 11) (Probable lysine-specific histone demethylase ELF6)
ruditapes_c27937	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable lysine-specific demethylase ELF6 (EC 1.14.11.-) (Early flowering 6) (Jumonji domain-containing protein 11) (Probable lysine-specific histone demethylase ELF6)
ruditapes_c27937	"negative regulation of long-day photoperiodism, flowering"	developmental processes	P	Probable lysine-specific demethylase ELF6 (EC 1.14.11.-) (Early flowering 6) (Jumonji domain-containing protein 11) (Probable lysine-specific histone demethylase ELF6)
ruditapes_c12235	response to DNA damage stimulus	stress response	P	RNA polymerase II transcription factor B subunit 2 (RNA polymerase II transcription factor B 52 kDa subunit) (RNA polymerase II transcription factor B p52 subunit)
ruditapes_c12235	"transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase II transcription factor B subunit 2 (RNA polymerase II transcription factor B 52 kDa subunit) (RNA polymerase II transcription factor B p52 subunit)
ruditapes_c12235	DNA repair	stress response	P	RNA polymerase II transcription factor B subunit 2 (RNA polymerase II transcription factor B 52 kDa subunit) (RNA polymerase II transcription factor B p52 subunit)
ruditapes_c12235	DNA repair	DNA metabolism	P	RNA polymerase II transcription factor B subunit 2 (RNA polymerase II transcription factor B 52 kDa subunit) (RNA polymerase II transcription factor B p52 subunit)
ruditapes_c12235	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase II transcription factor B subunit 2 (RNA polymerase II transcription factor B 52 kDa subunit) (RNA polymerase II transcription factor B p52 subunit)
ruditapes_c26088	transport	transport	P	Solute carrier family 25 member 38 homolog
ruditapes_c13131	protein transport	transport	P	Autophagy protein 16
ruditapes_c13131	transport	transport	P	Autophagy protein 16
ruditapes_c13131	autophagy	other metabolic processes	P	Autophagy protein 16
ruditapes_c16430	NAD biosynthetic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c16430	pyridine nucleotide biosynthetic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c16430	tryptophan catabolic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c16430	metabolic process	other metabolic processes	P	Kynureninase (EC 3.7.1.3) (Biosynthesis of nicotinic acid protein 5) (L-kynurenine hydrolase)
ruditapes_c21829	autophagy	other metabolic processes	P	Autophagy-related protein 18
ruditapes_c21829	protein transport	transport	P	Autophagy-related protein 18
ruditapes_c21829	transport	transport	P	Autophagy-related protein 18
ruditapes_s37090	mRNA processing	RNA metabolism	P	mRNA 3'-end-processing protein RNA14
ruditapes_s37090	RNA processing	RNA metabolism	P	mRNA 3'-end-processing protein RNA14
ruditapes_c23419	tRNA processing	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 2
ruditapes_c23419	tRNA thio-modification	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 2
ruditapes_c23419	tRNA wobble uridine modification	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 2
ruditapes_c19834	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes_c19834	"transcription, DNA-dependent"	RNA metabolism	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes_c7965	positive regulation of Rab GTPase activity	signal transduction	P	Oxidant-induced cell-cycle arrest protein 5
ruditapes_c7965	regulation of Rab GTPase activity	signal transduction	P	Oxidant-induced cell-cycle arrest protein 5
ruditapes_c26187	karyogamy	cell organization and biogenesis	P	Nuclear fusion protein KAR5 (Karyogamy protein 5)
ruditapes_c29624	DNA repair	stress response	P	Structure-specific endonuclease subunit SLX4
ruditapes_c29624	DNA repair	DNA metabolism	P	Structure-specific endonuclease subunit SLX4
ruditapes_c29624	DNA recombination	DNA metabolism	P	Structure-specific endonuclease subunit SLX4
ruditapes_c29624	response to DNA damage stimulus	stress response	P	Structure-specific endonuclease subunit SLX4
ruditapes_c8833	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes_c8833	cell cycle	cell cycle and proliferation	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes_c8833	"transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes2_lrc4491	meiosis	cell cycle and proliferation	P	Nitrogen permease regulator 3 (Required for meiotic nuclear division protein 11)
ruditapes_c20870	transport	transport	P	ATP-dependent RNA helicase DBP5 (EC 3.6.4.13)
ruditapes_c20870	protein transport	transport	P	ATP-dependent RNA helicase DBP5 (EC 3.6.4.13)
ruditapes_c20870	mRNA transport	transport	P	ATP-dependent RNA helicase DBP5 (EC 3.6.4.13)
ruditapes_c13459	protein transport	transport	P	Vacuolar protein-sorting protein BRO1 (BRO domain-containing protein 1)
ruditapes_c13459	transport	transport	P	Vacuolar protein-sorting protein BRO1 (BRO domain-containing protein 1)
ruditapes_c23389	cell cycle	cell cycle and proliferation	P	Negative regulator of the PHO system (EC 2.7.11.22) (Serine/threonine-protein kinase PHO85)
ruditapes_c23389	protein amino acid phosphorylation	protein metabolism	P	Negative regulator of the PHO system (EC 2.7.11.22) (Serine/threonine-protein kinase PHO85)
ruditapes_c23389	phosphorylation	other metabolic processes	P	Negative regulator of the PHO system (EC 2.7.11.22) (Serine/threonine-protein kinase PHO85)
ruditapes_lrc13123	peroxisome organization	cell organization and biogenesis	P	Peroxisomal biogenesis factor 6 (Peroxin-6)
ruditapes_c25695	ribosome biogenesis	other biological processes	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes_c25695	rRNA processing	RNA metabolism	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes2_c838	translation	protein metabolism	P	"Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)"
ruditapes_c559	translation	protein metabolism	P	"Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)"
ruditapes_c21258	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Regulator of rDNA transcription protein 5
ruditapes_c21258	"transcription, DNA-dependent"	RNA metabolism	P	Regulator of rDNA transcription protein 5
ruditapes_c23806	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 20 (Mediator complex subunit 20)
ruditapes_c23806	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 20 (Mediator complex subunit 20)
ruditapes_c23806	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 20 (Mediator complex subunit 20)
ruditapes_c301	lipid biosynthetic process	other metabolic processes	P	Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diphosphate decarboxylase) (MDDase)
ruditapes_c301	sterol biosynthetic process	other metabolic processes	P	Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diphosphate decarboxylase) (MDDase)
ruditapes_c301	steroid biosynthetic process	other metabolic processes	P	Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diphosphate decarboxylase) (MDDase)
ruditapes_c301	phosphorylation	other metabolic processes	P	Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diphosphate decarboxylase) (MDDase)
ruditapes_c301	isoprenoid biosynthetic process	other metabolic processes	P	Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diphosphate decarboxylase) (MDDase)
ruditapes_c8980	endocytosis	transport	P	Actin cytoskeleton-regulatory complex protein END3 (Endocytosis protein 3)
ruditapes_c8980	endocytosis	cell organization and biogenesis	P	Actin cytoskeleton-regulatory complex protein END3 (Endocytosis protein 3)
ruditapes_c16043	cell cycle	cell cycle and proliferation	P	Pre-mRNA-splicing factor RSE1
ruditapes_c16043	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor RSE1
ruditapes_c16043	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor RSE1
ruditapes2_c2082	vesicle-mediated transport	transport	P	Golgi to ER traffic protein 1 (Guided entry of tail-anchored proteins 1)
ruditapes2_c2082	transport	transport	P	Golgi to ER traffic protein 1 (Guided entry of tail-anchored proteins 1)
ruditapes_c23546	mRNA processing	RNA metabolism	P	mRNA cleavage and polyadenylation factor CLP1
ruditapes2_c1061	autophagic vacuole formation	stress response	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes2_c1061	autophagic vacuole formation	other metabolic processes	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes2_c1061	autophagic vacuole formation	cell organization and biogenesis	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes2_c1061	autophagy	other metabolic processes	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes2_c1061	protein transport	transport	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes2_c1061	transport	transport	P	Ubiquitin-like protein ATG12 (Autophagy-related protein 12)
ruditapes_c11159	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12)
ruditapes_c11159	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12)
ruditapes_c11159	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 12 (Mediator complex subunit 12)
ruditapes_c17631	vesicle-mediated transport	transport	P	Protein transport protein SEC24
ruditapes_c17631	protein transport	transport	P	Protein transport protein SEC24
ruditapes_c17631	intracellular protein transport	transport	P	Protein transport protein SEC24
ruditapes_c17631	transport	transport	P	Protein transport protein SEC24
ruditapes_c17631	ER to Golgi vesicle-mediated transport	transport	P	Protein transport protein SEC24
ruditapes_lrc21007	"transcription, DNA-dependent"	RNA metabolism	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_lrc21007	chromatin modification	cell organization and biogenesis	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_lrc21007	histone H3-K36 demethylation	protein metabolism	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_lrc21007	histone H3-K36 demethylation	cell organization and biogenesis	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_lrc21007	oxidation reduction	other metabolic processes	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_lrc21007	"regulation of transcription, DNA-dependent"	RNA metabolism	P	JmjC domain-containing histone demethylation protein 1 (EC 1.14.11.27) ([Histone-H3]-lysine-36 demethylase 1)
ruditapes_lrc7566	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_lrc7566	transcription termination	RNA metabolism	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_lrc7566	transcription termination	cell organization and biogenesis	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_lrc7566	mRNA processing	RNA metabolism	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_lrc7566	rRNA processing	RNA metabolism	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_lrc7566	"transcription, DNA-dependent"	RNA metabolism	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_c12775	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase SET9 (EC 2.1.1.43) (SET domain protein 9)
ruditapes_c12775	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase SET9 (EC 2.1.1.43) (SET domain protein 9)
ruditapes_c12775	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SET9 (EC 2.1.1.43) (SET domain protein 9)
ruditapes_c12775	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SET9 (EC 2.1.1.43) (SET domain protein 9)
ruditapes_lrc37829	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein HIR1
ruditapes_lrc37829	chromatin modification	cell organization and biogenesis	P	Protein HIR1
ruditapes_lrc37829	"transcription, DNA-dependent"	RNA metabolism	P	Protein HIR1
ruditapes2_lrc3235	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_lrc33473	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_c19356	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes_c19356	protein transport	transport	P	Autophagy-related protein 2
ruditapes_c19356	transport	transport	P	Autophagy-related protein 2
ruditapes_c23840	iron ion homeostasis	other biological processes	P	"Iron-sulfur clusters transporter ATM1, mitochondrial"
ruditapes_c23840	transmembrane transport	transport	P	"Iron-sulfur clusters transporter ATM1, mitochondrial"
ruditapes_c23840	transport	transport	P	"Iron-sulfur clusters transporter ATM1, mitochondrial"
ruditapes_c23840	ATP catabolic process	other metabolic processes	P	"Iron-sulfur clusters transporter ATM1, mitochondrial"
ruditapes_c23840	ion transport	transport	P	"Iron-sulfur clusters transporter ATM1, mitochondrial"
ruditapes_c20533	methylation	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes_c20533	phospholipid metabolic process	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes_c20533	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.17)
ruditapes2_c1717	cellular amino acid biosynthetic process	other metabolic processes	P	"Amino-acid acetyltransferase, mitochondrial (EC 2.3.1.1) (Arginine-requiring protein 2) (Glutamate N-acetyltransferase) (N-acetylglutamate synthase) (AGS) (NAGS)"
ruditapes_c13865	RNA metabolic process	RNA metabolism	P	"2',3'-cyclic-nucleotide 3'-phosphodiesterase (CPDase) (EC 3.1.4.37)"
ruditapes_c11728	cell communication	other biological processes	P	Sorting nexin MVP1
ruditapes_c11728	protein transport	transport	P	Sorting nexin MVP1
ruditapes_c11728	transport	transport	P	Sorting nexin MVP1
ruditapes_c2589	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 10
ruditapes_c2589	ribosome biogenesis	other biological processes	P	U3 small nucleolar RNA-associated protein 10
ruditapes_c31666	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes_lrc24504	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes_lrc24504	"transcription, DNA-dependent"	RNA metabolism	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes_c31666	"transcription, DNA-dependent"	RNA metabolism	P	Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase)
ruditapes_c29731	apoptosis	death	P	Pheromone-processing carboxypeptidase KEX1 (EC 3.4.16.6) (Carboxypeptidase D)
ruditapes_c29731	proteolysis	protein metabolism	P	Pheromone-processing carboxypeptidase KEX1 (EC 3.4.16.6) (Carboxypeptidase D)
ruditapes_c24590	"transcription, DNA-dependent"	RNA metabolism	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c24590	rRNA processing	RNA metabolism	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c24590	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c24590	mRNA processing	RNA metabolism	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c24590	transcription termination	RNA metabolism	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c24590	transcription termination	cell organization and biogenesis	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c24590	"regulation of transcription, DNA-dependent"	RNA metabolism	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c2552	biosynthetic process	other metabolic processes	P	"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.131) (Alpha-1,2-mannosyltransferase ALG11) (Asparagine-linked glycosylation protein 11) (Glycolipid 2-alpha-mannosyltransferase)"
ruditapes_c22315	protein transport	transport	P	Vacuolar protein sorting/targeting protein 10 (Carboxypeptidase Y receptor) (CPY receptor) (Sortilin VPS10) (Vacuolar carboxypeptidase sorting receptor VPS10)
ruditapes_c22315	transport	transport	P	Vacuolar protein sorting/targeting protein 10 (Carboxypeptidase Y receptor) (CPY receptor) (Sortilin VPS10) (Vacuolar carboxypeptidase sorting receptor VPS10)
ruditapes_c15517	protein transport	transport	P	Vacuolar protein sorting/targeting protein 10 (Carboxypeptidase Y receptor) (CPY receptor) (Sortilin VPS10) (Vacuolar carboxypeptidase sorting receptor VPS10)
ruditapes_c15517	transport	transport	P	Vacuolar protein sorting/targeting protein 10 (Carboxypeptidase Y receptor) (CPY receptor) (Sortilin VPS10) (Vacuolar carboxypeptidase sorting receptor VPS10)
ruditapes_c4797	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription activator MSS11
ruditapes_c4797	"transcription, DNA-dependent"	RNA metabolism	P	Transcription activator MSS11
ruditapes_c18320	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16)
ruditapes_c18320	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16)
ruditapes_c25119	proteolysis	protein metabolism	P	Probable cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related protein 4)
ruditapes_c25119	autophagy	other metabolic processes	P	Probable cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related protein 4)
ruditapes_c25119	protein transport	transport	P	Probable cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related protein 4)
ruditapes_c25119	transport	transport	P	Probable cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related protein 4)
ruditapes_s38057	transposition	other biological processes	P	Histone chaperone RTT106
ruditapes_s38057	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone chaperone RTT106
ruditapes_s38057	"transcription, DNA-dependent"	RNA metabolism	P	Histone chaperone RTT106
ruditapes_c27780	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Regulator of rDNA transcription protein 5
ruditapes_c27780	"transcription, DNA-dependent"	RNA metabolism	P	Regulator of rDNA transcription protein 5
ruditapes_c14869	transmembrane transport	transport	P	Mitochondrial thiamine pyrophosphate carrier 1
ruditapes_c14869	transport	transport	P	Mitochondrial thiamine pyrophosphate carrier 1
ruditapes_c17554	transport	transport	P	Vacuolar fusion protein CCZ1
ruditapes_c17554	protein transport	transport	P	Vacuolar fusion protein CCZ1
ruditapes_c17554	autophagy	other metabolic processes	P	Vacuolar fusion protein CCZ1
ruditapes_c18366	autophagy	other metabolic processes	P	Autophagy-related protein 17
ruditapes_c7225	lipid metabolic process	other metabolic processes	P	Increased rDNA silencing protein 4
ruditapes_c16201	rRNA processing	RNA metabolism	P	Probable nucleolar complex protein 14
ruditapes_c16201	ribosome biogenesis	other biological processes	P	Probable nucleolar complex protein 14
ruditapes_c16201	ribosomal small subunit biogenesis	other biological processes	P	Probable nucleolar complex protein 14
ruditapes_s39646	autophagy	other metabolic processes	P	Sorting nexin-4 (Autophagy-related protein 24)
ruditapes_s39646	protein transport	transport	P	Sorting nexin-4 (Autophagy-related protein 24)
ruditapes_s39646	cell communication	other biological processes	P	Sorting nexin-4 (Autophagy-related protein 24)
ruditapes_s39646	transport	transport	P	Sorting nexin-4 (Autophagy-related protein 24)
ruditapes2_c2605	protein polymerization	cell organization and biogenesis	P	Protein DML1
ruditapes_c16806	ribosome biogenesis	other biological processes	P	ATP-dependent RNA helicase DBP9 (EC 3.6.4.13)
ruditapes_c16806	rRNA processing	RNA metabolism	P	ATP-dependent RNA helicase DBP9 (EC 3.6.4.13)
ruditapes_c5127	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Non-histone chromosomal protein 6
ruditapes_c5127	"transcription, DNA-dependent"	RNA metabolism	P	Non-histone chromosomal protein 6
ruditapes_c5127	DNA repair	stress response	P	Non-histone chromosomal protein 6
ruditapes_c5127	DNA repair	DNA metabolism	P	Non-histone chromosomal protein 6
ruditapes_c5127	response to DNA damage stimulus	stress response	P	Non-histone chromosomal protein 6
ruditapes_c7784	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes_c7784	regulation of RNA elongation	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes_c7784	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes_c7784	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes_c7784	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes2_c1044	mitosis	cell cycle and proliferation	P	Antagonist of mitotic exit network protein 1
ruditapes2_c1044	mitosis	cell organization and biogenesis	P	Antagonist of mitotic exit network protein 1
ruditapes2_c1044	cell division	other biological processes	P	Antagonist of mitotic exit network protein 1
ruditapes2_c1044	cell cycle	cell cycle and proliferation	P	Antagonist of mitotic exit network protein 1
ruditapes_lrc30216	rRNA processing	RNA metabolism	P	Pre-rRNA-processing protein RIX1
ruditapes_lrc30216	ribosome biogenesis	other biological processes	P	Pre-rRNA-processing protein RIX1
ruditapes_c20399	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone transcription regulator 3 homolog
ruditapes_c20399	chromosome segregation	other biological processes	P	Histone transcription regulator 3 homolog
ruditapes_c20399	"transcription, DNA-dependent"	RNA metabolism	P	Histone transcription regulator 3 homolog
ruditapes2_lrc6202	protein folding	protein metabolism	P	FK506-binding protein 1 (FKBP) (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rapamycin-binding protein)
ruditapes2_lrc6202	protein peptidyl-prolyl isomerization	protein metabolism	P	FK506-binding protein 1 (FKBP) (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rapamycin-binding protein)
ruditapes_c20142	transport	transport	P	Protein PNS1
ruditapes_c29519	transport	transport	P	sn-glycerol-3-phosphate-binding periplasmic protein UgpB
ruditapes_c12945	methylation	other metabolic processes	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes_c12945	RNA methylation	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes_c12945	tRNA processing	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes_c12945	RNA processing	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase (EC 2.1.1.35) (tRNA(m5U54)-methyltransferase) (RUMT)
ruditapes_c14265	cysteine biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c14265	cellular amino acid biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c14265	oxidation reduction	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c16753	cysteine biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c16753	oxidation reduction	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c16753	cellular amino acid biosynthetic process	other metabolic processes	P	Sulfite reductase [NADPH] hemoprotein beta-component (SiR-HP) (SiRHP) (EC 1.8.1.2)
ruditapes_c20831	pyridine nucleotide biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c20831	NAD biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c20831	nicotinate nucleotide biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c21605	L-arabinose transport	transport	P	Arabinose import ATP-binding protein AraG (EC 3.6.3.17)
ruditapes_c21605	ATP catabolic process	other metabolic processes	P	Arabinose import ATP-binding protein AraG (EC 3.6.3.17)
ruditapes_c21605	transport	transport	P	Arabinose import ATP-binding protein AraG (EC 3.6.3.17)
ruditapes_c21605	carbohydrate transport	transport	P	Arabinose import ATP-binding protein AraG (EC 3.6.3.17)
ruditapes_c23660	protein transport	transport	P	Outer-membrane lipoprotein LolB
ruditapes_c23660	transport	transport	P	Outer-membrane lipoprotein LolB
ruditapes_c16171	phosphorylation	other metabolic processes	P	"Putative phosphoenolpyruvate synthase regulatory protein (PEP synthase regulatory protein) (PSRP) (EC 2.7.11.-) (EC 2.7.4.-) (Pyruvate, water dikinase regulatory protein)"
ruditapes2_c1774	pentose-phosphate shunt	other metabolic processes	P	Transaldolase 1 (EC 2.2.1.2)
ruditapes2_c1774	carbohydrate metabolic process	other metabolic processes	P	Transaldolase 1 (EC 2.2.1.2)
ruditapes_c11562	cellular amino acid biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c11562	methylation	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c11562	methionine biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c18163	arginyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c18163	arginyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c18163	translation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c18163	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c18163	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) (GlyRS)
ruditapes_c15042	carbohydrate metabolic process	other metabolic processes	P	FGGY carbohydrate kinase domain-containing protein (EC 2.7.1.-)
ruditapes_c15042	phosphorylation	other metabolic processes	P	FGGY carbohydrate kinase domain-containing protein (EC 2.7.1.-)
ruditapes_c19420	transport	transport	P	Selenium-binding protein 1-B
ruditapes_c19420	protein transport	transport	P	Selenium-binding protein 1-B
ruditapes_c5434	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 8-B (Mediator complex subunit 8-B)
ruditapes_c5434	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 8-B (Mediator complex subunit 8-B)
ruditapes_c5434	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 8-B (Mediator complex subunit 8-B)
ruditapes2_c752	pronephros development	developmental processes	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes2_c752	anti-apoptosis	death	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes_c6191	anti-apoptosis	death	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes2_c877	negative regulation of caspase activity	death	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes2_c877	apoptosis	death	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes2_c752	multicellular organismal development	developmental processes	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes_c6191	apoptosis	death	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes2_c877	pronephros development	developmental processes	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes_c6191	negative regulation of caspase activity	death	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes2_c752	apoptosis	death	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes2_c877	multicellular organismal development	developmental processes	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes2_c752	negative regulation of caspase activity	death	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes_c6191	pronephros development	developmental processes	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes2_c877	anti-apoptosis	death	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes_c6191	multicellular organismal development	developmental processes	P	TP53-regulated inhibitor of apoptosis 1-B (p53-inducible cell-survival factor-B) (p53csv-B)
ruditapes_c626	electron transport chain	other metabolic processes	P	ERO1-like protein alpha (ERO1-L) (ERO1-L-alpha) (EC 1.8.4.-) (Endoplasmic oxidoreductin-1-like protein) (Oxidoreductin-1-L-alpha)
ruditapes_c626	oxidation reduction	other metabolic processes	P	ERO1-like protein alpha (ERO1-L) (ERO1-L-alpha) (EC 1.8.4.-) (Endoplasmic oxidoreductin-1-like protein) (Oxidoreductin-1-L-alpha)
ruditapes_c626	protein thiol-disulfide exchange	protein metabolism	P	ERO1-like protein alpha (ERO1-L) (ERO1-L-alpha) (EC 1.8.4.-) (Endoplasmic oxidoreductin-1-like protein) (Oxidoreductin-1-L-alpha)
ruditapes_c626	transport	transport	P	ERO1-like protein alpha (ERO1-L) (ERO1-L-alpha) (EC 1.8.4.-) (Endoplasmic oxidoreductin-1-like protein) (Oxidoreductin-1-L-alpha)
ruditapes_c10932	inositol biosynthetic process	other metabolic processes	P	Inositol-3-phosphate synthase 1-B (IPS 1-B) (EC 5.5.1.4) (Myo-inositol 1-phosphate synthase B) (MI-1-P synthase B) (MIP synthase B)
ruditapes_c10932	phospholipid biosynthetic process	other metabolic processes	P	Inositol-3-phosphate synthase 1-B (IPS 1-B) (EC 5.5.1.4) (Myo-inositol 1-phosphate synthase B) (MI-1-P synthase B) (MIP synthase B)
ruditapes_c23990	transport	transport	P	Sorting nexin-31
ruditapes_c23990	protein transport	transport	P	Sorting nexin-31
ruditapes_c23990	cell communication	other biological processes	P	Sorting nexin-31
ruditapes2_c6088	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes2_c1190	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes2_c5240	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_s38966	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_c33400	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_s39056	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_lrc34973	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_lrc38134	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes2_c5657	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_s39056	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_s38966	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_lrc35486	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_lrc35529	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_lrc33316	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes2_c5657	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_c33400	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes2_c1190	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes2_c5240	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes2_c6088	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes2_c3769	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes2_c3769	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_lrc35486	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_lrc35529	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_lrc34973	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_lrc33316	translational elongation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_lrc38134	translation	protein metabolism	P	Elongation factor 1-beta (EF-1-beta)
ruditapes_c17540	ubiquinone biosynthetic process	other metabolic processes	P	Ubiquinone biosynthesis monooxygenase COQ6 (EC 1.14.13.-) (Coenzyme Q10 monooxygenase 6)
ruditapes_c17540	oxidation reduction	other metabolic processes	P	Ubiquinone biosynthesis monooxygenase COQ6 (EC 1.14.13.-) (Coenzyme Q10 monooxygenase 6)
ruditapes_c17540	metabolic process	other metabolic processes	P	Ubiquinone biosynthesis monooxygenase COQ6 (EC 1.14.13.-) (Coenzyme Q10 monooxygenase 6)
ruditapes2_c2496	regulation of catalytic activity	other biological processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes2_c2496	cellular calcium ion homeostasis	other biological processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes2_c71	positive regulation of ATPase activity	other biological processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes2_c71	regulation of calcium-mediated signaling	signal transduction	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes2_c2496	L-ascorbic acid biosynthetic process	other metabolic processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes2_c71	cellular calcium ion homeostasis	other biological processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes2_c71	L-ascorbic acid biosynthetic process	other metabolic processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes2_c71	regulation of catalytic activity	other biological processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes2_c2496	positive regulation of ATPase activity	other biological processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes2_c2496	regulation of calcium-mediated signaling	signal transduction	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes_c11609	carboxylic acid metabolic process	other metabolic processes	P	Pyridoxal-dependent decarboxylase domain-containing protein 1 (EC 4.1.1.-)
ruditapes_c12190	"regulation of transcription, DNA-dependent"	RNA metabolism	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
ruditapes_c12190	"transcription, DNA-dependent"	RNA metabolism	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
ruditapes_c12190	chromatin remodeling	cell organization and biogenesis	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
ruditapes_c16402	protein transport	transport	P	Mitochondrial import receptor subunit TOM20 homolog (Mitochondrial 20 kDa outer membrane protein) (Outer mitochondrial membrane receptor Tom20)
ruditapes_c16402	transport	transport	P	Mitochondrial import receptor subunit TOM20 homolog (Mitochondrial 20 kDa outer membrane protein) (Outer mitochondrial membrane receptor Tom20)
ruditapes_c16402	protein targeting	transport	P	Mitochondrial import receptor subunit TOM20 homolog (Mitochondrial 20 kDa outer membrane protein) (Outer mitochondrial membrane receptor Tom20)
ruditapes_c16402	intracellular protein transport	transport	P	Mitochondrial import receptor subunit TOM20 homolog (Mitochondrial 20 kDa outer membrane protein) (Outer mitochondrial membrane receptor Tom20)
ruditapes_c27532	chromosome condensation	cell organization and biogenesis	P	Condensin-2 complex subunit G2 (Chromosome-associated protein G2) (CAP-G2) (Leucine zipper protein 5) (More than blood protein) (Non-SMC condensin II complex subunit G2)
ruditapes_c27532	inner cell mass cell proliferation	cell cycle and proliferation	P	Condensin-2 complex subunit G2 (Chromosome-associated protein G2) (CAP-G2) (Leucine zipper protein 5) (More than blood protein) (Non-SMC condensin II complex subunit G2)
ruditapes_c27532	inner cell mass cell proliferation	developmental processes	P	Condensin-2 complex subunit G2 (Chromosome-associated protein G2) (CAP-G2) (Leucine zipper protein 5) (More than blood protein) (Non-SMC condensin II complex subunit G2)
ruditapes_c27532	cell division	other biological processes	P	Condensin-2 complex subunit G2 (Chromosome-associated protein G2) (CAP-G2) (Leucine zipper protein 5) (More than blood protein) (Non-SMC condensin II complex subunit G2)
ruditapes_c27532	cell cycle	cell cycle and proliferation	P	Condensin-2 complex subunit G2 (Chromosome-associated protein G2) (CAP-G2) (Leucine zipper protein 5) (More than blood protein) (Non-SMC condensin II complex subunit G2)
ruditapes_c27532	mitosis	cell cycle and proliferation	P	Condensin-2 complex subunit G2 (Chromosome-associated protein G2) (CAP-G2) (Leucine zipper protein 5) (More than blood protein) (Non-SMC condensin II complex subunit G2)
ruditapes_c27532	mitosis	cell organization and biogenesis	P	Condensin-2 complex subunit G2 (Chromosome-associated protein G2) (CAP-G2) (Leucine zipper protein 5) (More than blood protein) (Non-SMC condensin II complex subunit G2)
ruditapes_c7200	protein targeting to mitochondrion	transport	P	Mitochondrial import inner membrane translocase subunit Tim13
ruditapes_c7200	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim13
ruditapes_c7200	protein import into mitochondrial inner membrane	transport	P	Mitochondrial import inner membrane translocase subunit Tim13
ruditapes_c7200	protein import into mitochondrial inner membrane	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim13
ruditapes_c7200	transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim13
ruditapes_c7200	protein transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim13
ruditapes_c6968	translation	protein metabolism	P	"39S ribosomal protein L15, mitochondrial (L15mt) (MRP-L15)"
ruditapes_c8734	small GTPase mediated signal transduction	signal transduction	P	Ras-related and estrogen-regulated growth inhibitor-like protein (RERG/Ras-like protein)
ruditapes_c8734	GTP catabolic process	other metabolic processes	P	Ras-related and estrogen-regulated growth inhibitor-like protein (RERG/Ras-like protein)
ruditapes_c8734	signal transduction	signal transduction	P	Ras-related and estrogen-regulated growth inhibitor-like protein (RERG/Ras-like protein)
ruditapes2_c844	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT4 (DRB sensitivity-inducing factor small subunit) (DSIF small subunit)
ruditapes2_c844	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT4 (DRB sensitivity-inducing factor small subunit) (DSIF small subunit)
ruditapes2_c844	positive regulation of RNA elongation	RNA metabolism	P	Transcription elongation factor SPT4 (DRB sensitivity-inducing factor small subunit) (DSIF small subunit)
ruditapes_c15227	biological_process	other biological processes	P	Ankyrin repeat domain-containing protein 54
ruditapes_c4334	biological_process	other biological processes	P	Cytochrome c oxidase protein 20 homolog
ruditapes_c9378	biological_process	other biological processes	P	Claudin-7-A
ruditapes_c17315	Wnt receptor signaling pathway	signal transduction	P	R-spondin-1 (Roof plate-specific spondin-1)
ruditapes_c17315	response to stimulus	other biological processes	P	R-spondin-1 (Roof plate-specific spondin-1)
ruditapes_c7450	protein import into mitochondrial inner membrane	transport	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c7450	protein import into mitochondrial inner membrane	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c7450	protein transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c11777	protein transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c7450	transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c11777	protein targeting to mitochondrion	transport	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c11777	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c7450	protein targeting to mitochondrion	transport	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c7450	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c11777	protein import into mitochondrial inner membrane	transport	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c11777	protein import into mitochondrial inner membrane	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c11777	transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim10
ruditapes_c18255	RNA splicing	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c18255	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c18255	mRNA processing	RNA metabolism	P	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)
ruditapes_c29874	biological_process	other biological processes	P	Tetratricopeptide repeat protein 33 (TPR repeat protein 33)
ruditapes_c26868	protein catabolic process	protein metabolism	P	F-box only protein 27
ruditapes_c26868	biological_process	other biological processes	P	F-box only protein 27
ruditapes_c15762	DNA replication initiation	DNA metabolism	P	DNA replication licensing factor mcm2 (EC 3.6.4.12) (Minichromosome maintenance protein 2)
ruditapes_c15762	cell cycle	cell cycle and proliferation	P	DNA replication licensing factor mcm2 (EC 3.6.4.12) (Minichromosome maintenance protein 2)
ruditapes_c15762	DNA unwinding during replication	DNA metabolism	P	DNA replication licensing factor mcm2 (EC 3.6.4.12) (Minichromosome maintenance protein 2)
ruditapes_c15762	regulation of DNA replication initiation	DNA metabolism	P	DNA replication licensing factor mcm2 (EC 3.6.4.12) (Minichromosome maintenance protein 2)
ruditapes_c15762	ATP catabolic process	other metabolic processes	P	DNA replication licensing factor mcm2 (EC 3.6.4.12) (Minichromosome maintenance protein 2)
ruditapes_c15762	DNA replication	DNA metabolism	P	DNA replication licensing factor mcm2 (EC 3.6.4.12) (Minichromosome maintenance protein 2)
ruditapes_lrc12531	erythrocyte differentiation	developmental processes	P	Solute carrier family 25 member 38
ruditapes_lrc12531	transport	transport	P	Solute carrier family 25 member 38
ruditapes_c9001	mRNA processing	RNA metabolism	P	Cleavage and polyadenylation specificity factor subunit 5
ruditapes_c9001	mRNA polyadenylation	RNA metabolism	P	Cleavage and polyadenylation specificity factor subunit 5
ruditapes2_c1673	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit G-A (eIF3g-A) (Eukaryotic translation initiation factor 3 RNA-binding subunit A) (eIF-3 RNA-binding subunit A) (Eukaryotic translation initiation factor 3 subunit 4-A)
ruditapes2_c1673	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit G-A (eIF3g-A) (Eukaryotic translation initiation factor 3 RNA-binding subunit A) (eIF-3 RNA-binding subunit A) (Eukaryotic translation initiation factor 3 subunit 4-A)
ruditapes_c17518	transport	transport	P	"Mitochondrial translocator assembly and maintenance protein 41 homolog (TAM41) (MMP37-like protein, mitochondrial)"
ruditapes_c17518	protein import into mitochondrial matrix	transport	P	"Mitochondrial translocator assembly and maintenance protein 41 homolog (TAM41) (MMP37-like protein, mitochondrial)"
ruditapes_c17518	protein import into mitochondrial matrix	cell organization and biogenesis	P	"Mitochondrial translocator assembly and maintenance protein 41 homolog (TAM41) (MMP37-like protein, mitochondrial)"
ruditapes_c17518	protein transport	transport	P	"Mitochondrial translocator assembly and maintenance protein 41 homolog (TAM41) (MMP37-like protein, mitochondrial)"
ruditapes_c31930	smooth muscle cell proliferation	cell cycle and proliferation	P	"N-alpha-acetyltransferase 35, NatC auxiliary subunit (Corneal wound-healing-related protein) (Embryonic growth-associated protein) (Protein MAK10 homolog)"
ruditapes_c29076	smooth muscle cell proliferation	cell cycle and proliferation	P	"N-alpha-acetyltransferase 35, NatC auxiliary subunit (Corneal wound-healing-related protein) (Embryonic growth-associated protein) (Protein MAK10 homolog)"
ruditapes_c23707	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Polycomb group RING finger protein 1 (Nervous system Polycomb-1) (NSPc1) (Fragment)
ruditapes_c23707	"transcription, DNA-dependent"	RNA metabolism	P	Polycomb group RING finger protein 1 (Nervous system Polycomb-1) (NSPc1) (Fragment)
ruditapes_c3640	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (ATP synthase subunit 6) (F-ATPase protein 6)
ruditapes_c3640	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (ATP synthase subunit 6) (F-ATPase protein 6)
ruditapes_c3640	transport	transport	P	ATP synthase subunit a (ATP synthase subunit 6) (F-ATPase protein 6)
ruditapes_c3640	ion transport	transport	P	ATP synthase subunit a (ATP synthase subunit 6) (F-ATPase protein 6)
ruditapes_c3640	proton transport	transport	P	ATP synthase subunit a (ATP synthase subunit 6) (F-ATPase protein 6)
ruditapes_c3640	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (ATP synthase subunit 6) (F-ATPase protein 6)
ruditapes_c16930	biological_process	other biological processes	P	F-box protein At2g17036
ruditapes_c17663	poly(A)+ mRNA export from nucleus	transport	P	Nucleoporin GLE1 (GLE1-like protein)
ruditapes_c17663	transport	transport	P	Nucleoporin GLE1 (GLE1-like protein)
ruditapes_c17663	protein transport	transport	P	Nucleoporin GLE1 (GLE1-like protein)
ruditapes_c17663	mRNA transport	transport	P	Nucleoporin GLE1 (GLE1-like protein)
ruditapes_c16323	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit G (eIF3g) (Eukaryotic translation initiation factor 3 RNA-binding subunit) (eIF-3 RNA-binding subunit) (Eukaryotic translation initiation factor 3 subunit 4)
ruditapes_c16323	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit G (eIF3g) (Eukaryotic translation initiation factor 3 RNA-binding subunit) (eIF-3 RNA-binding subunit) (Eukaryotic translation initiation factor 3 subunit 4)
ruditapes_c17655	"transcription, DNA-dependent"	RNA metabolism	P	Myb-binding protein 1A-like protein
ruditapes_c17655	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Myb-binding protein 1A-like protein
ruditapes_c20890	methylation	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c20890	mRNA processing	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c20890	mRNA capping	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c20890	metabolic process	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c20890	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c3982	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (Protein moonshine) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c3982	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (Protein moonshine) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c26441	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (Protein moonshine) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c26441	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (Protein moonshine) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_s39234	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_s39234	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c20145	somitogenesis	developmental processes	P	GDP-fucose protein O-fucosyltransferase 1 (EC 2.4.1.221) (Peptide-O-fucosyltransferase 1) (O-FucT-1)
ruditapes_c20145	Notch signaling pathway	signal transduction	P	GDP-fucose protein O-fucosyltransferase 1 (EC 2.4.1.221) (Peptide-O-fucosyltransferase 1) (O-FucT-1)
ruditapes_c20145	biological_process	other biological processes	P	GDP-fucose protein O-fucosyltransferase 1 (EC 2.4.1.221) (Peptide-O-fucosyltransferase 1) (O-FucT-1)
ruditapes_c20145	protein amino acid O-linked glycosylation	protein metabolism	P	GDP-fucose protein O-fucosyltransferase 1 (EC 2.4.1.221) (Peptide-O-fucosyltransferase 1) (O-FucT-1)
ruditapes_c20145	angiogenesis	developmental processes	P	GDP-fucose protein O-fucosyltransferase 1 (EC 2.4.1.221) (Peptide-O-fucosyltransferase 1) (O-FucT-1)
ruditapes_c20145	heart development	developmental processes	P	GDP-fucose protein O-fucosyltransferase 1 (EC 2.4.1.221) (Peptide-O-fucosyltransferase 1) (O-FucT-1)
ruditapes_c20145	fucose metabolic process	other metabolic processes	P	GDP-fucose protein O-fucosyltransferase 1 (EC 2.4.1.221) (Peptide-O-fucosyltransferase 1) (O-FucT-1)
ruditapes_c20145	nervous system development	developmental processes	P	GDP-fucose protein O-fucosyltransferase 1 (EC 2.4.1.221) (Peptide-O-fucosyltransferase 1) (O-FucT-1)
ruditapes_c20145	carbohydrate metabolic process	other metabolic processes	P	GDP-fucose protein O-fucosyltransferase 1 (EC 2.4.1.221) (Peptide-O-fucosyltransferase 1) (O-FucT-1)
ruditapes_c23048	ATP catabolic process	other metabolic processes	P	Spermidine/putrescine import ATP-binding protein PotA (EC 3.6.3.31)
ruditapes_c23048	transport	transport	P	Spermidine/putrescine import ATP-binding protein PotA (EC 3.6.3.31)
ruditapes_c25799	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimP
ruditapes_c9316	translation	protein metabolism	P	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC 6.3.5.-)
ruditapes_c21884	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c21884	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c21884	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c21884	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c21884	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c2543	response to hydrogen peroxide	stress response	P	Chaperone protein ClpB1 (ATP-dependent Clp protease ATP-binding subunit ClpB homolog 1) (Casein lytic proteinase B1) (Heat shock protein 101)
ruditapes_c2543	protein unfolding	protein metabolism	P	Chaperone protein ClpB1 (ATP-dependent Clp protease ATP-binding subunit ClpB homolog 1) (Casein lytic proteinase B1) (Heat shock protein 101)
ruditapes_c2543	cellular response to heat	stress response	P	Chaperone protein ClpB1 (ATP-dependent Clp protease ATP-binding subunit ClpB homolog 1) (Casein lytic proteinase B1) (Heat shock protein 101)
ruditapes_c2543	response to heat	stress response	P	Chaperone protein ClpB1 (ATP-dependent Clp protease ATP-binding subunit ClpB homolog 1) (Casein lytic proteinase B1) (Heat shock protein 101)
ruditapes_c2543	response to high light intensity	other biological processes	P	Chaperone protein ClpB1 (ATP-dependent Clp protease ATP-binding subunit ClpB homolog 1) (Casein lytic proteinase B1) (Heat shock protein 101)
ruditapes_c2543	protein metabolic process	protein metabolism	P	Chaperone protein ClpB1 (ATP-dependent Clp protease ATP-binding subunit ClpB homolog 1) (Casein lytic proteinase B1) (Heat shock protein 101)
ruditapes_c2543	response to stress	stress response	P	Chaperone protein ClpB1 (ATP-dependent Clp protease ATP-binding subunit ClpB homolog 1) (Casein lytic proteinase B1) (Heat shock protein 101)
ruditapes_c6457	translation	protein metabolism	P	40S ribosomal protein S29
ruditapes_c23801	protein polymerization	cell organization and biogenesis	P	Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3
ruditapes_c23801	chloroplast fission	cell organization and biogenesis	P	Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3
ruditapes_s40333	tRNA processing	RNA metabolism	P	Ribonuclease P protein component (RNase P protein) (RNaseP protein) (EC 3.1.26.5) (Protein C5)
ruditapes_c10881	tRNA processing	RNA metabolism	P	Ribonuclease P protein component (RNase P protein) (RNaseP protein) (EC 3.1.26.5) (Protein C5)
ruditapes_c24260	ion transport	transport	P	Probable potassium transport system protein kup
ruditapes_c24260	transport	transport	P	Probable potassium transport system protein kup
ruditapes_c24260	potassium ion transport	transport	P	Probable potassium transport system protein kup
ruditapes_c23653	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c23653	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
ruditapes_c13234	methylation	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c13234	tRNA processing	RNA metabolism	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c13234	metabolic process	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes_c13234	oxidation reduction	other metabolic processes	P	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC (tRNA mnm(5)s(2)U biosynthesis bifunctional protein) [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase (EC 2.1.1.61); FAD-dependent cmnm(5)s(2)U34 oxidoreductase (EC 1.5.-.-)]
ruditapes2_lrc4002	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutS
ruditapes2_lrc4002	mismatch repair	stress response	P	DNA mismatch repair protein MutS
ruditapes2_lrc4002	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes2_lrc4002	DNA repair	stress response	P	DNA mismatch repair protein MutS
ruditapes2_lrc4002	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c18424	tRNA aminoacylation for protein translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c18424	tRNA aminoacylation for protein translation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c18424	translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c18424	prolyl-tRNA aminoacylation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c18424	prolyl-tRNA aminoacylation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes2_c1704	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c1704	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c1704	cell division	other biological processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c1704	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c1704	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c1704	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c23505	metabolic process	other metabolic processes	P	Probable 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (5-keto-4-deoxy-glucarate dehydratase) (KDGDH)
ruditapes_c23505	carbohydrate catabolic process	other metabolic processes	P	Probable 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (5-keto-4-deoxy-glucarate dehydratase) (KDGDH)
ruditapes_c21681	translation	protein metabolism	P	"Eukaryotic translation initiation factor 3 subunit C (eIF3c) (Eukaryotic translation initiation factor 3 93 kDa subunit homolog) (eIF3 p93) (Translation initiation factor eIF3, p93 subunit homolog)"
ruditapes_c21681	translational initiation	protein metabolism	P	"Eukaryotic translation initiation factor 3 subunit C (eIF3c) (Eukaryotic translation initiation factor 3 93 kDa subunit homolog) (eIF3 p93) (Translation initiation factor eIF3, p93 subunit homolog)"
ruditapes_c20738	small GTPase mediated signal transduction	signal transduction	P	Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (GTPase EF-hand protein of mitochondria 1)
ruditapes_c20738	GTP catabolic process	other metabolic processes	P	Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (GTPase EF-hand protein of mitochondria 1)
ruditapes_c20738	cellular homeostasis	other biological processes	P	Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (GTPase EF-hand protein of mitochondria 1)
ruditapes_c22998	positive regulation of GTPase activity	other biological processes	P	Guanine nucleotide-exchange factor SEC12 (Protein transport protein SEC12)
ruditapes_c22998	transport	transport	P	Guanine nucleotide-exchange factor SEC12 (Protein transport protein SEC12)
ruditapes_c22998	protein transport	transport	P	Guanine nucleotide-exchange factor SEC12 (Protein transport protein SEC12)
ruditapes_c22998	vesicle-mediated transport	transport	P	Guanine nucleotide-exchange factor SEC12 (Protein transport protein SEC12)
ruditapes_c25687	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor BYE1
ruditapes_c25687	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor BYE1
ruditapes2_c2954	"transcription, DNA-dependent"	RNA metabolism	P	Serine/threonine-protein kinase SSN3 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8)
ruditapes2_c2954	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Serine/threonine-protein kinase SSN3 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8)
ruditapes2_c2954	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase SSN3 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8)
ruditapes2_c2954	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase SSN3 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8)
ruditapes2_c2954	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase SSN3 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin-dependent kinase 8)
ruditapes_c7885	phosphatidylcholine metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c7885	lipid catabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c8208	phosphatidylcholine metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c7885	lipid metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c8208	metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c7885	metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c8208	lipid metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c8208	lipid catabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c29004	rRNA processing	RNA metabolism	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes_c29004	ribosome biogenesis	other biological processes	P	ATP-dependent rRNA helicase SPB4 (EC 3.6.4.-)
ruditapes_c31851	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor CWC26
ruditapes_c31851	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor CWC26
ruditapes_c27800	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein ERB1 (Eukaryotic ribosome biogenesis protein 1)
ruditapes_c27800	rRNA processing	RNA metabolism	P	Ribosome biogenesis protein ERB1 (Eukaryotic ribosome biogenesis protein 1)
ruditapes_c27800	regulation of cell cycle	cell cycle and proliferation	P	Ribosome biogenesis protein ERB1 (Eukaryotic ribosome biogenesis protein 1)
ruditapes2_c1919	protein transport	transport	P	Exocyst complex component EXO84
ruditapes2_c1919	transport	transport	P	Exocyst complex component EXO84
ruditapes2_c1919	exocytosis	transport	P	Exocyst complex component EXO84
ruditapes_s39879	protein peptidyl-prolyl isomerization	protein metabolism	P	FK506-binding protein 1 (FKBP) (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rapamycin-binding protein)
ruditapes_s39879	protein folding	protein metabolism	P	FK506-binding protein 1 (FKBP) (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rapamycin-binding protein)
ruditapes_c31061	GPI anchor biosynthetic process	protein metabolism	P	GPI mannosyltransferase 4 (EC 2.4.1.-) (GPI mannosyltransferase IV) (GPI-MT-IV)
ruditapes_c27566	GPI anchor biosynthetic process	protein metabolism	P	GPI mannosyltransferase 4 (EC 2.4.1.-) (GPI mannosyltransferase IV) (GPI-MT-IV)
ruditapes_c22937	oxidation reduction	other metabolic processes	P	L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31) (Alpha-aminoadipate reductase) (Alpha-AR)
ruditapes_c22937	lysine biosynthetic process	other metabolic processes	P	L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31) (Alpha-aminoadipate reductase) (Alpha-AR)
ruditapes_c22937	metabolic process	other metabolic processes	P	L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31) (Alpha-aminoadipate reductase) (Alpha-AR)
ruditapes_c22937	cellular amino acid biosynthetic process	other metabolic processes	P	L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31) (Alpha-aminoadipate reductase) (Alpha-AR)
ruditapes_c9890	chromatin modification	cell organization and biogenesis	P	SWR1-complex protein 5
ruditapes_c9890	"transcription, DNA-dependent"	RNA metabolism	P	SWR1-complex protein 5
ruditapes_c9890	"regulation of transcription, DNA-dependent"	RNA metabolism	P	SWR1-complex protein 5
ruditapes_c21540	rRNA processing	RNA metabolism	P	ATP-dependent RNA helicase DBP10 (EC 3.6.4.13)
ruditapes_c21540	ribosome biogenesis	other biological processes	P	ATP-dependent RNA helicase DBP10 (EC 3.6.4.13)
ruditapes_c30985	mRNA processing	RNA metabolism	P	Protein SWT21
ruditapes_c30985	RNA splicing	RNA metabolism	P	Protein SWT21
ruditapes_c10252	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 13 (Mediator complex subunit 13)
ruditapes_c10252	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 13 (Mediator complex subunit 13)
ruditapes_c10252	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 13 (Mediator complex subunit 13)
ruditapes_c27064	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c27064	DNA replication	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c14067	protein transport	transport	P	Vacuolar protein sorting/targeting protein 10 (Carboxypeptidase Y receptor) (CPY receptor) (Sortilin VPS10) (Vacuolar carboxypeptidase sorting receptor VPS10)
ruditapes_c14067	transport	transport	P	Vacuolar protein sorting/targeting protein 10 (Carboxypeptidase Y receptor) (CPY receptor) (Sortilin VPS10) (Vacuolar carboxypeptidase sorting receptor VPS10)
ruditapes_c23178	DNA repair	stress response	P	ATP-dependent DNA helicase MPH1 (EC 3.6.4.12)
ruditapes_c23178	DNA repair	DNA metabolism	P	ATP-dependent DNA helicase MPH1 (EC 3.6.4.12)
ruditapes_c23178	response to DNA damage stimulus	stress response	P	ATP-dependent DNA helicase MPH1 (EC 3.6.4.12)
ruditapes_lrc8288	DNA repair	stress response	P	DNA mismatch repair protein HSM3
ruditapes_lrc8288	DNA repair	DNA metabolism	P	DNA mismatch repair protein HSM3
ruditapes_lrc8288	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein HSM3
ruditapes2_c2261	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein HIR2
ruditapes2_c2261	"transcription, DNA-dependent"	RNA metabolism	P	Protein HIR2
ruditapes2_c2261	chromatin modification	cell organization and biogenesis	P	Protein HIR2
ruditapes_c3180	protein transport	transport	P	Autophagy-related protein 11
ruditapes_c3180	transport	transport	P	Autophagy-related protein 11
ruditapes_c3180	autophagy	other metabolic processes	P	Autophagy-related protein 11
ruditapes_c18513	chromosome segregation	other biological processes	P	Protein ZIP2 (Zipping up meiotic chromosomes protein 2)
ruditapes_c18513	cell cycle	cell cycle and proliferation	P	Protein ZIP2 (Zipping up meiotic chromosomes protein 2)
ruditapes_c18513	meiosis	cell cycle and proliferation	P	Protein ZIP2 (Zipping up meiotic chromosomes protein 2)
ruditapes_c17017	mRNA processing	RNA metabolism	P	Protein CFT1 (Cleavage factor two protein 1)
ruditapes_c19528	protein transport	transport	P	Protein transport protein SEC23-2
ruditapes_c19528	vesicle-mediated transport	transport	P	Protein transport protein SEC23-2
ruditapes_c19528	intracellular protein transport	transport	P	Protein transport protein SEC23-2
ruditapes_c19528	ER to Golgi vesicle-mediated transport	transport	P	Protein transport protein SEC23-2
ruditapes_c19528	transport	transport	P	Protein transport protein SEC23-2
ruditapes_c28227	DNA replication	DNA metabolism	P	DNA polymerase epsilon subunit B (EC 2.7.7.7) (DNA polymerase II subunit 2)
ruditapes_c9520	cell division	other biological processes	P	Guanine nucleotide exchange factor LTE1
ruditapes_c9520	regulation of small GTPase mediated signal transduction	signal transduction	P	Guanine nucleotide exchange factor LTE1
ruditapes_c21803	cell division	other biological processes	P	Guanine nucleotide exchange factor LTE1
ruditapes_c21803	small GTPase mediated signal transduction	signal transduction	P	Guanine nucleotide exchange factor LTE1
ruditapes_c21803	regulation of small GTPase mediated signal transduction	signal transduction	P	Guanine nucleotide exchange factor LTE1
ruditapes_c9520	mitosis	cell cycle and proliferation	P	Guanine nucleotide exchange factor LTE1
ruditapes_c9520	mitosis	cell organization and biogenesis	P	Guanine nucleotide exchange factor LTE1
ruditapes_c21803	mitosis	cell cycle and proliferation	P	Guanine nucleotide exchange factor LTE1
ruditapes_c21803	mitosis	cell organization and biogenesis	P	Guanine nucleotide exchange factor LTE1
ruditapes_c9520	cell cycle	cell cycle and proliferation	P	Guanine nucleotide exchange factor LTE1
ruditapes_c21803	cell cycle	cell cycle and proliferation	P	Guanine nucleotide exchange factor LTE1
ruditapes_c9520	small GTPase mediated signal transduction	signal transduction	P	Guanine nucleotide exchange factor LTE1
ruditapes_c7868	RNA splicing	RNA metabolism	P	U1 small nuclear ribonucleoprotein component SNU71
ruditapes_c7868	mRNA processing	RNA metabolism	P	U1 small nuclear ribonucleoprotein component SNU71
ruditapes_lrc24170	sporulation resulting in formation of a cellular spore	other biological processes	P	"Protein RMD9, mitochondrial"
ruditapes2_c1775	protein transport	transport	P	Vacuolar fusion protein MON1
ruditapes2_c1775	transport	transport	P	Vacuolar fusion protein MON1
ruditapes2_c1775	autophagy	other metabolic processes	P	Vacuolar fusion protein MON1
ruditapes2_c4524	karyogamy	cell organization and biogenesis	P	Nuclear fusion protein KAR5 (Karyogamy protein 5)
ruditapes_c11748	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c11748	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes2_c2233	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative DNA helicase INO80 (EC 3.6.4.12)
ruditapes2_c2233	DNA repair	stress response	P	Putative DNA helicase INO80 (EC 3.6.4.12)
ruditapes2_c2233	DNA repair	DNA metabolism	P	Putative DNA helicase INO80 (EC 3.6.4.12)
ruditapes2_c2233	response to DNA damage stimulus	stress response	P	Putative DNA helicase INO80 (EC 3.6.4.12)
ruditapes2_c2233	chromatin modification	cell organization and biogenesis	P	Putative DNA helicase INO80 (EC 3.6.4.12)
ruditapes2_c2233	"transcription, DNA-dependent"	RNA metabolism	P	Putative DNA helicase INO80 (EC 3.6.4.12)
ruditapes_c27665	rRNA processing	RNA metabolism	P	Pre-rRNA-processing protein RIX1
ruditapes_c27665	ribosome biogenesis	other biological processes	P	Pre-rRNA-processing protein RIX1
ruditapes_c13130	lipid metabolic process	other metabolic processes	P	Altered inheritance of mitochondria protein 6
ruditapes_c23353	positive regulation of Rab GTPase activity	signal transduction	P	GTPase-activating protein GYP7 (GAP for YPT7)
ruditapes_c23353	regulation of Rab GTPase activity	signal transduction	P	GTPase-activating protein GYP7 (GAP for YPT7)
ruditapes_c23353	positive regulation of GTPase activity	other biological processes	P	GTPase-activating protein GYP7 (GAP for YPT7)
ruditapes_c18970	mRNA processing	RNA metabolism	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_c18970	transcription termination	RNA metabolism	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_c18970	transcription termination	cell organization and biogenesis	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_c18970	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_c18970	"transcription, DNA-dependent"	RNA metabolism	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_c18970	rRNA processing	RNA metabolism	P	Decapping nuclease RAI1 (EC 3.6.1.-)
ruditapes_c27600	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	Diaminopimelate epimerase (DAP epimerase) (EC 5.1.1.7)
ruditapes_c27600	lysine biosynthetic process	other metabolic processes	P	Diaminopimelate epimerase (DAP epimerase) (EC 5.1.1.7)
ruditapes_c27600	cellular amino acid biosynthetic process	other metabolic processes	P	Diaminopimelate epimerase (DAP epimerase) (EC 5.1.1.7)
ruditapes_c13962	protein peptidyl-prolyl isomerization	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c13962	protein transport	transport	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c13962	cell division	other biological processes	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c13962	cell cycle	cell cycle and proliferation	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c13962	protein folding	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c26080	"transcription, DNA-dependent"	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c26080	"regulation of transcription, DNA-dependent"	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c26080	transcription termination	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c26080	transcription termination	cell organization and biogenesis	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c13611	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c13611	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c13611	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c18883	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c18883	cellular amino acid biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes2_c4477	'de novo' IMP biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 2 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase II) (FGAM synthase II)
ruditapes2_c4477	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 2 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase II) (FGAM synthase II)
ruditapes_c13225	'de novo' IMP biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 1 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase I) (FGAM synthase I)
ruditapes_c13225	glutamine metabolic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 1 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase I) (FGAM synthase I)
ruditapes_c13225	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase 1 (EC 6.3.5.3) (Phosphoribosylformylglycinamidine synthase I) (FGAM synthase I)
ruditapes_c7252	tyrosyl-tRNA aminoacylation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c7252	tyrosyl-tRNA aminoacylation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_lrc35206	tRNA aminoacylation for protein translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_lrc35206	tRNA aminoacylation for protein translation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_lrc35206	tyrosyl-tRNA aminoacylation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_lrc35206	tyrosyl-tRNA aminoacylation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_lrc35206	translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c7252	translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c7252	tRNA aminoacylation for protein translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c7252	tRNA aminoacylation for protein translation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c16854	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c16854	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c16854	translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c16854	tRNA aminoacylation for protein translation	protein metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c16854	tRNA aminoacylation for protein translation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c16854	tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)
ruditapes_c31259	oxidation reduction	other metabolic processes	P	Putative formate dehydrogenase SAR2393 (EC 1.2.1.2)
ruditapes_c31259	formate metabolic process	other metabolic processes	P	Putative formate dehydrogenase SAR2393 (EC 1.2.1.2)
ruditapes_lrc9569	transport	transport	P	Sodium-dependent dicarboxylate transporter SdcS (Na(+)/dicarboxylate symporter)
ruditapes_lrc9569	transmembrane transport	transport	P	Sodium-dependent dicarboxylate transporter SdcS (Na(+)/dicarboxylate symporter)
ruditapes_lrc9569	ion transport	transport	P	Sodium-dependent dicarboxylate transporter SdcS (Na(+)/dicarboxylate symporter)
ruditapes_lrc9569	sodium ion transport	transport	P	Sodium-dependent dicarboxylate transporter SdcS (Na(+)/dicarboxylate symporter)
ruditapes_c15543	phospholipid biosynthetic process	other metabolic processes	P	Heptaprenylglyceryl phosphate synthase (HepGP synthase) (EC 2.5.1.n9) (Glycerol-1-phosphate heptaprenyltransferase)
ruditapes_c20902	porphyrin biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c20902	heme biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c20934	DNA replication	DNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c20934	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c20934	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c20934	"transcription, DNA-dependent"	RNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c26552	response to antibiotic	other biological processes	P	Phosphatidylglycerol lysyltransferase (EC 2.3.2.3) (Lysylphosphatidylglycerol synthase) (LPG synthase) (Multiple peptide resistance factor)
ruditapes_c26552	lipid metabolic process	other metabolic processes	P	Phosphatidylglycerol lysyltransferase (EC 2.3.2.3) (Lysylphosphatidylglycerol synthase) (LPG synthase) (Multiple peptide resistance factor)
ruditapes_c26552	pathogenesis	other biological processes	P	Phosphatidylglycerol lysyltransferase (EC 2.3.2.3) (Lysylphosphatidylglycerol synthase) (LPG synthase) (Multiple peptide resistance factor)
ruditapes_c31164	methylation	other metabolic processes	P	Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO (EC 2.1.1.74) (Folate-dependent tRNA (uracil-5-)-methyltransferase) (Folate-dependent tRNA(M-5-U54)-methyltransferase)
ruditapes_c31164	tRNA processing	RNA metabolism	P	Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO (EC 2.1.1.74) (Folate-dependent tRNA (uracil-5-)-methyltransferase) (Folate-dependent tRNA(M-5-U54)-methyltransferase)
ruditapes_c30770	cellular amino acid biosynthetic process	other metabolic processes	P	Arginine biosynthesis bifunctional protein ArgJ [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGSase)]
ruditapes_c30770	arginine biosynthetic process	other metabolic processes	P	Arginine biosynthesis bifunctional protein ArgJ [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGSase)]
ruditapes_c30770	metabolic process	other metabolic processes	P	Arginine biosynthesis bifunctional protein ArgJ [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGSase)]
ruditapes2_lrc6653	negative regulation of translational initiation	protein metabolism	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes2_lrc6653	mRNA transport	transport	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes2_lrc6653	brain development	developmental processes	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes2_lrc6653	transport	transport	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes2_lrc6653	cartilage development	developmental processes	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes2_lrc6653	forebrain-midbrain boundary formation	developmental processes	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes2_lrc6653	branching morphogenesis of a nerve	developmental processes	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes2_lrc6653	neuron projection morphogenesis	developmental processes	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes2_lrc6653	neuron projection morphogenesis	cell organization and biogenesis	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes2_lrc6653	biological_process	other biological processes	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes2_lrc6653	neural crest cell fate specification	developmental processes	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes2_lrc6653	neural crest cell fate specification	cell organization and biogenesis	P	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (XtFmrp) (FMRP)
ruditapes_c17348	metabolic process	other metabolic processes	P	Fumarylacetoacetate hydrolase domain-containing protein 2 (EC 3.-.-.-)
ruditapes_c20077	oxidation reduction	other metabolic processes	P	Nucleoredoxin (EC 1.8.1.8)
ruditapes_c20077	Wnt receptor signaling pathway	signal transduction	P	Nucleoredoxin (EC 1.8.1.8)
ruditapes_c20077	cell differentiation	other biological processes	P	Nucleoredoxin (EC 1.8.1.8)
ruditapes_c20077	multicellular organismal development	developmental processes	P	Nucleoredoxin (EC 1.8.1.8)
ruditapes_c13952	asparagine catabolic process via L-aspartate	other metabolic processes	P	Isoaspartyl peptidase/L-asparaginase (EC 3.4.19.5) (EC 3.5.1.1) (Asparaginase-like protein 1) (Beta-aspartyl-peptidase) (Isoaspartyl dipeptidase) (L-asparagine amidohydrolase) [Cleaved into: Isoaspartyl peptidase/L-asparaginase alpha chain; Isoaspartyl peptidase/L-asparaginase beta chain]
ruditapes2_c2056	protein transport	transport	P	Inactive rhomboid protein 1 (iRhom1) (Rhomboid family member 1)
ruditapes2_c2056	cell proliferation	cell cycle and proliferation	P	Inactive rhomboid protein 1 (iRhom1) (Rhomboid family member 1)
ruditapes2_c2056	cell migration	other biological processes	P	Inactive rhomboid protein 1 (iRhom1) (Rhomboid family member 1)
ruditapes2_c2056	negative regulation of protein secretion	transport	P	Inactive rhomboid protein 1 (iRhom1) (Rhomboid family member 1)
ruditapes2_c2056	transport	transport	P	Inactive rhomboid protein 1 (iRhom1) (Rhomboid family member 1)
ruditapes2_c2056	regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Inactive rhomboid protein 1 (iRhom1) (Rhomboid family member 1)
ruditapes2_c2056	proteolysis	protein metabolism	P	Inactive rhomboid protein 1 (iRhom1) (Rhomboid family member 1)
ruditapes_c19775	carbohydrate metabolic process	other metabolic processes	P	"Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B (EC 2.4.1.145) (N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase IVb) (GlcNAc-T IVb) (GnT-IVb) (N-acetylglucosaminyltransferase IVb) (UDP-N-acetylglucosamine: alpha-1,3-D-mannoside beta-1,4-N-acetylglucosaminyltransferase IVb)"
ruditapes2_c5848	multicellular organismal development	developmental processes	P	Proteasomal ubiquitin receptor ADRM1-A (Oocyte membrane protein)
ruditapes_c1836	multicellular organismal development	developmental processes	P	Proteasomal ubiquitin receptor ADRM1-A (Oocyte membrane protein)
ruditapes_c1225	protein amino acid glycosylation	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18)
ruditapes_c1225	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (DDOST 48 kDa subunit) (Oligosaccharyl transferase 48 kDa subunit) (EC 2.4.99.18)
ruditapes_c24760	carbohydrate metabolic process	other metabolic processes	P	Carbohydrate sulfotransferase 10 (EC 2.8.2.-) (HNK-1 sulfotransferase) (HNK-1ST) (HNK1ST)
ruditapes_c24760	carbohydrate biosynthetic process	other metabolic processes	P	Carbohydrate sulfotransferase 10 (EC 2.8.2.-) (HNK-1 sulfotransferase) (HNK-1ST) (HNK1ST)
ruditapes_c2733	Golgi vesicle transport	transport	P	Golgin subfamily A member 5 (Golgin-84)
ruditapes_c2733	Golgi organization	cell organization and biogenesis	P	Golgin subfamily A member 5 (Golgin-84)
ruditapes_c22753	cytokine-mediated signaling pathway	signal transduction	P	XIAP-associated factor 1 (BIRC4-binding protein)
ruditapes_c22753	type I interferon-mediated signaling pathway	signal transduction	P	XIAP-associated factor 1 (BIRC4-binding protein)
ruditapes_c22753	apoptosis	death	P	XIAP-associated factor 1 (BIRC4-binding protein)
ruditapes_c11466	lipoate biosynthetic process	other metabolic processes	P	"Lipoyl synthase, mitochondrial (EC 2.8.1.8) (Lipoate synthase) (LS) (Lip-syn) (Lipoic acid synthase)"
ruditapes2_c2923	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase-like 1 (EC 5.4.99.-) (tRNA pseudouridylate synthase-like 1) (tRNA-uridine isomerase-like 1)
ruditapes2_c2923	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase-like 1 (EC 5.4.99.-) (tRNA pseudouridylate synthase-like 1) (tRNA-uridine isomerase-like 1)
ruditapes2_c2923	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase-like 1 (EC 5.4.99.-) (tRNA pseudouridylate synthase-like 1) (tRNA-uridine isomerase-like 1)
ruditapes_c140	electron transport chain	other metabolic processes	P	"Cytochrome c, somatic A"
ruditapes2_c373	transport	transport	P	"Cytochrome c, somatic A"
ruditapes2_c3766	transport	transport	P	"Cytochrome c, somatic A"
ruditapes_c140	transport	transport	P	"Cytochrome c, somatic A"
ruditapes2_c3766	electron transport chain	other metabolic processes	P	"Cytochrome c, somatic A"
ruditapes2_c373	electron transport chain	other metabolic processes	P	"Cytochrome c, somatic A"
ruditapes_c14700	RNA processing	RNA metabolism	P	Putative ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)
ruditapes2_c2996	oxidation reduction	other metabolic processes	P	Alkane 1-monooxygenase 2 (EC 1.14.15.3) (Alkane hydroxylase) (AHs) (Terminal alkane hydroxylase)
ruditapes2_c2996	alkane catabolic process	other metabolic processes	P	Alkane 1-monooxygenase 2 (EC 1.14.15.3) (Alkane hydroxylase) (AHs) (Terminal alkane hydroxylase)
ruditapes2_c2996	lipid metabolic process	other metabolic processes	P	Alkane 1-monooxygenase 2 (EC 1.14.15.3) (Alkane hydroxylase) (AHs) (Terminal alkane hydroxylase)
ruditapes_c7407	cell division	other biological processes	P	Chromosome-anchoring protein RacA
ruditapes_c7407	sporulation resulting in formation of a cellular spore	other biological processes	P	Chromosome-anchoring protein RacA
ruditapes_c7407	cell cycle	cell cycle and proliferation	P	Chromosome-anchoring protein RacA
ruditapes_c7407	viral envelope fusion with host membrane	cell organization and biogenesis	P	Chromosome-anchoring protein RacA
ruditapes_c7407	chromosome segregation	other biological processes	P	Chromosome-anchoring protein RacA
ruditapes2_c1529	dTMP biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes2_c1529	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes2_c1529	methylation	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c27799	ion transport	transport	P	Potassium-transporting ATPase B chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) (Potassium-translocating ATPase B chain)
ruditapes_c27799	metabolic process	other metabolic processes	P	Potassium-transporting ATPase B chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) (Potassium-translocating ATPase B chain)
ruditapes_c27799	potassium ion transport	transport	P	Potassium-transporting ATPase B chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) (Potassium-translocating ATPase B chain)
ruditapes_c27799	transport	transport	P	Potassium-transporting ATPase B chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) (Potassium-translocating ATPase B chain)
ruditapes_c27799	cation transport	transport	P	Potassium-transporting ATPase B chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) (Potassium-translocating ATPase B chain)
ruditapes2_c1027	oxidation reduction	other metabolic processes	P	Ferredoxin--NADP reductase 1 (FNR 1) (Fd-NADP(+) reductase 1) (EC 1.18.1.2)
ruditapes_c16497	RNA splicing	RNA metabolism	P	THO complex subunit 7 homolog (Functional spliceosome-associated protein 24) (fSAP24) (Ngg1-interacting factor 3-like protein 1-binding protein 1) (NIF3L1-binding protein 1) (hTREX30)
ruditapes_c16497	mRNA transport	transport	P	THO complex subunit 7 homolog (Functional spliceosome-associated protein 24) (fSAP24) (Ngg1-interacting factor 3-like protein 1-binding protein 1) (NIF3L1-binding protein 1) (hTREX30)
ruditapes_c16497	transport	transport	P	THO complex subunit 7 homolog (Functional spliceosome-associated protein 24) (fSAP24) (Ngg1-interacting factor 3-like protein 1-binding protein 1) (NIF3L1-binding protein 1) (hTREX30)
ruditapes_c16497	mRNA export from nucleus	transport	P	THO complex subunit 7 homolog (Functional spliceosome-associated protein 24) (fSAP24) (Ngg1-interacting factor 3-like protein 1-binding protein 1) (NIF3L1-binding protein 1) (hTREX30)
ruditapes_c16497	intronless viral mRNA export from host nucleus	transport	P	THO complex subunit 7 homolog (Functional spliceosome-associated protein 24) (fSAP24) (Ngg1-interacting factor 3-like protein 1-binding protein 1) (NIF3L1-binding protein 1) (hTREX30)
ruditapes_c16497	mRNA processing	RNA metabolism	P	THO complex subunit 7 homolog (Functional spliceosome-associated protein 24) (fSAP24) (Ngg1-interacting factor 3-like protein 1-binding protein 1) (NIF3L1-binding protein 1) (hTREX30)
ruditapes_c31969	ubiquitin-dependent protein catabolic process	protein metabolism	P	Inactive ubiquitin carboxyl-terminal hydrolase 54 (Inactive ubiquitin-specific peptidase 54)
ruditapes_lrc23561	ubiquitin-dependent protein catabolic process	protein metabolism	P	PAB-dependent poly(A)-specific ribonuclease subunit 2 (EC 3.1.13.4) (Inactive ubiquitin carboxyl-terminal hydrolase 52)
ruditapes_lrc23561	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	PAB-dependent poly(A)-specific ribonuclease subunit 2 (EC 3.1.13.4) (Inactive ubiquitin carboxyl-terminal hydrolase 52)
ruditapes_c30537	response to stimulus	other biological processes	P	Olfactory receptor 5M10 (Olfactory receptor OR11-207)
ruditapes_c30537	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 5M10 (Olfactory receptor OR11-207)
ruditapes_c30537	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 5M10 (Olfactory receptor OR11-207)
ruditapes_c30537	signal transduction	signal transduction	P	Olfactory receptor 5M10 (Olfactory receptor OR11-207)
ruditapes_c30537	sensory perception of smell	other biological processes	P	Olfactory receptor 5M10 (Olfactory receptor OR11-207)
ruditapes2_c385	negative regulation of cell growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c4251	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c4251	regulation of growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c4251	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c1479	negative regulation of cell growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c1479	negative regulation of translation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes_c20856	positive regulation of dendrite morphogenesis	developmental processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes_c20856	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c1479	regulation of growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c4251	positive regulation of dendrite morphogenesis	developmental processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c4251	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c4251	positive regulation of protein binding	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c385	cell differentiation	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c1479	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c385	positive regulation of dendrite morphogenesis	developmental processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c385	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c1479	cell differentiation	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes_c20856	positive regulation of protein binding	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes_c20856	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c4251	negative regulation of translation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c385	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c4251	negative regulation of cell growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes_c20856	cell differentiation	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes_c20856	regulation of growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c385	regulation of growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c385	positive regulation of protein binding	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes_c20856	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c1479	positive regulation of protein binding	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c385	negative regulation of translation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes_c20856	negative regulation of translation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c1479	positive regulation of dendrite morphogenesis	developmental processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c1479	positive regulation of dendrite morphogenesis	cell organization and biogenesis	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes_c20856	negative regulation of cell growth	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c4251	cell differentiation	other biological processes	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c385	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes2_c1479	positive regulation of peptidyl-serine phosphorylation	protein metabolism	P	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (Gastric cancer multidrug resistance-associated protein) (Protein EEG-1) (RNA granule protein 140)
ruditapes_c11993	sodium ion transport	transport	P	Vesicular glutamate transporter 1 (VGluT1) (Solute carrier family 17 member 7)
ruditapes_c11993	neurotransmitter transport	transport	P	Vesicular glutamate transporter 1 (VGluT1) (Solute carrier family 17 member 7)
ruditapes_c11993	transport	transport	P	Vesicular glutamate transporter 1 (VGluT1) (Solute carrier family 17 member 7)
ruditapes_c11993	transmembrane transport	transport	P	Vesicular glutamate transporter 1 (VGluT1) (Solute carrier family 17 member 7)
ruditapes_c11993	ion transport	transport	P	Vesicular glutamate transporter 1 (VGluT1) (Solute carrier family 17 member 7)
ruditapes_c18789	gene silencing by RNA	other metabolic processes	P	Serrate RNA effector molecule homolog B (Arsenite-resistance protein 2-B)
ruditapes_c18789	primary microRNA processing	RNA metabolism	P	Serrate RNA effector molecule homolog B (Arsenite-resistance protein 2-B)
ruditapes_c18789	cell proliferation	cell cycle and proliferation	P	Serrate RNA effector molecule homolog B (Arsenite-resistance protein 2-B)
ruditapes_c30868	metabolic process	other metabolic processes	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-)
ruditapes_c30868	defense response to virus	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-)
ruditapes_c30868	regulation of innate immune response	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-)
ruditapes_c30868	innate immune response	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-)
ruditapes_c18289	metabolic process	other metabolic processes	P	Lipid phosphate phosphatase-related protein type 1
ruditapes_c15198	ribosome biogenesis	other biological processes	P	Ribosome production factor 1 (Brix domain-containing protein 5) (Ribosome biogenesis protein RPF1)
ruditapes_c20912	rRNA processing	RNA metabolism	P	Ribosome production factor 1 (Brix domain-containing protein 5) (Ribosome biogenesis protein RPF1)
ruditapes_c15198	rRNA processing	RNA metabolism	P	Ribosome production factor 1 (Brix domain-containing protein 5) (Ribosome biogenesis protein RPF1)
ruditapes_c20912	ribosome biogenesis	other biological processes	P	Ribosome production factor 1 (Brix domain-containing protein 5) (Ribosome biogenesis protein RPF1)
ruditapes_c11362	biological_process	other biological processes	P	Complement C1q tumor necrosis factor-related protein 6
ruditapes_c12339	biological_process	other biological processes	P	Complement C1q tumor necrosis factor-related protein 6
ruditapes_lrc13943	tissue regeneration	stress response	P	Carboxypeptidase Q (EC 3.4.17.-) (Hematopoietic lineage switch 2 related protein) (Hls2-rp) (Liver annexin-like protein 1) (LAL-1) (Plasma glutamate carboxypeptidase)
ruditapes_lrc13943	tissue regeneration	developmental processes	P	Carboxypeptidase Q (EC 3.4.17.-) (Hematopoietic lineage switch 2 related protein) (Hls2-rp) (Liver annexin-like protein 1) (LAL-1) (Plasma glutamate carboxypeptidase)
ruditapes_lrc13943	proteolysis	protein metabolism	P	Carboxypeptidase Q (EC 3.4.17.-) (Hematopoietic lineage switch 2 related protein) (Hls2-rp) (Liver annexin-like protein 1) (LAL-1) (Plasma glutamate carboxypeptidase)
ruditapes2_c2864	mRNA transport	transport	P	Protein quaking-B
ruditapes2_c2864	RNA splicing	RNA metabolism	P	Protein quaking-B
ruditapes2_c2864	cell differentiation	other biological processes	P	Protein quaking-B
ruditapes2_c2864	regulation of translation	protein metabolism	P	Protein quaking-B
ruditapes2_c2864	mRNA processing	RNA metabolism	P	Protein quaking-B
ruditapes2_c2864	multicellular organismal development	developmental processes	P	Protein quaking-B
ruditapes2_c2864	transport	transport	P	Protein quaking-B
ruditapes_c28137	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c8147	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c8147	viral genome replication	other biological processes	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c28137	viral genome replication	other biological processes	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes2_c290	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor Sox-8
ruditapes2_c290	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor Sox-8
ruditapes2_c357	growth	other biological processes	P	Growth/differentiation factor 8 (GDF-8) (Myostatin)
ruditapes_c18913	dorsal appendage formation	cell organization and biogenesis	P	Probable RNA helicase armi (EC 3.6.4.13) (Protein armitage)
ruditapes_c18913	multicellular organismal development	developmental processes	P	Probable RNA helicase armi (EC 3.6.4.13) (Protein armitage)
ruditapes_c18913	pole plasm protein localization	developmental processes	P	Probable RNA helicase armi (EC 3.6.4.13) (Protein armitage)
ruditapes_c18913	pole plasm protein localization	cell organization and biogenesis	P	Probable RNA helicase armi (EC 3.6.4.13) (Protein armitage)
ruditapes_c18913	microtubule organizing center organization	cell organization and biogenesis	P	Probable RNA helicase armi (EC 3.6.4.13) (Protein armitage)
ruditapes_c18913	gene silencing by RNA	other metabolic processes	P	Probable RNA helicase armi (EC 3.6.4.13) (Protein armitage)
ruditapes_c18913	long-term memory	other biological processes	P	Probable RNA helicase armi (EC 3.6.4.13) (Protein armitage)
ruditapes_c18913	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Probable RNA helicase armi (EC 3.6.4.13) (Protein armitage)
ruditapes_c18913	embryonic axis specification	developmental processes	P	Probable RNA helicase armi (EC 3.6.4.13) (Protein armitage)
ruditapes_c18913	RNA interference	other metabolic processes	P	Probable RNA helicase armi (EC 3.6.4.13) (Protein armitage)
ruditapes_c26209	cell surface receptor linked signal transduction	signal transduction	P	G-protein coupled receptor 98 (Monogenic audiogenic seizure susceptibility protein 1 homolog) (Very large G-protein coupled receptor 1)
ruditapes_c26209	multicellular organismal development	developmental processes	P	G-protein coupled receptor 98 (Monogenic audiogenic seizure susceptibility protein 1 homolog) (Very large G-protein coupled receptor 1)
ruditapes_c26209	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 98 (Monogenic audiogenic seizure susceptibility protein 1 homolog) (Very large G-protein coupled receptor 1)
ruditapes_c26209	neuropeptide signaling pathway	signal transduction	P	G-protein coupled receptor 98 (Monogenic audiogenic seizure susceptibility protein 1 homolog) (Very large G-protein coupled receptor 1)
ruditapes_c26209	signal transduction	signal transduction	P	G-protein coupled receptor 98 (Monogenic audiogenic seizure susceptibility protein 1 homolog) (Very large G-protein coupled receptor 1)
ruditapes_c26209	cell communication	other biological processes	P	G-protein coupled receptor 98 (Monogenic audiogenic seizure susceptibility protein 1 homolog) (Very large G-protein coupled receptor 1)
ruditapes_c30996	cell morphogenesis	cell organization and biogenesis	P	Kelch-like protein 10
ruditapes_c30996	male gonad development	developmental processes	P	Kelch-like protein 10
ruditapes_c30996	male genitalia morphogenesis	developmental processes	P	Kelch-like protein 10
ruditapes_c30996	fertilization	other biological processes	P	Kelch-like protein 10
ruditapes_c30996	spermatid development	other biological processes	P	Kelch-like protein 10
ruditapes_c30996	homeostasis of number of cells within a tissue	other biological processes	P	Kelch-like protein 10
ruditapes_lrc37326	protein localization	other biological processes	P	A-kinase anchor protein 7 isoforms delta and gamma (AKAP-7 isoforms delta and gamma) (A-kinase anchor protein 18) (AKAP-18) (Protein kinase A-anchoring protein 7 isoforms delta and gamma) (PRKA7 isoforms delta and gamma)
ruditapes_lrc37326	phosphorylation	other metabolic processes	P	A-kinase anchor protein 7 isoforms delta and gamma (AKAP-7 isoforms delta and gamma) (A-kinase anchor protein 18) (AKAP-18) (Protein kinase A-anchoring protein 7 isoforms delta and gamma) (PRKA7 isoforms delta and gamma)
ruditapes_lrc37326	RNA metabolic process	RNA metabolism	P	A-kinase anchor protein 7 isoforms delta and gamma (AKAP-7 isoforms delta and gamma) (A-kinase anchor protein 18) (AKAP-18) (Protein kinase A-anchoring protein 7 isoforms delta and gamma) (PRKA7 isoforms delta and gamma)
ruditapes_lrc37326	regulation of protein kinase A signaling cascade	signal transduction	P	A-kinase anchor protein 7 isoforms delta and gamma (AKAP-7 isoforms delta and gamma) (A-kinase anchor protein 18) (AKAP-18) (Protein kinase A-anchoring protein 7 isoforms delta and gamma) (PRKA7 isoforms delta and gamma)
ruditapes_c24221	oxidation reduction	other metabolic processes	P	Acyl-CoA dehydrogenase family member 10 (ACAD-10) (EC 1.3.99.-)
ruditapes_c24221	metabolic process	other metabolic processes	P	Acyl-CoA dehydrogenase family member 10 (ACAD-10) (EC 1.3.99.-)
ruditapes_c21777	L-amino acid transport	transport	P	Putative sodium-coupled neutral amino acid transporter 7
ruditapes_c21777	amino acid transport	transport	P	Putative sodium-coupled neutral amino acid transporter 7
ruditapes_c21777	sodium ion transport	transport	P	Putative sodium-coupled neutral amino acid transporter 7
ruditapes_c21777	transport	transport	P	Putative sodium-coupled neutral amino acid transporter 7
ruditapes_c21777	glutamine transport	transport	P	Putative sodium-coupled neutral amino acid transporter 7
ruditapes_c21777	ion transport	transport	P	Putative sodium-coupled neutral amino acid transporter 7
ruditapes_c20976	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor isoform 4G-2 (eIF(iso)-4G-2) (eIF(iso)4G-2) (Eukaryotic initiation factor iso-4F subunit p82) (eIF-(iso)4F p82 subunit)
ruditapes_c20976	RNA metabolic process	RNA metabolism	P	Eukaryotic translation initiation factor isoform 4G-2 (eIF(iso)-4G-2) (eIF(iso)4G-2) (Eukaryotic initiation factor iso-4F subunit p82) (eIF-(iso)4F p82 subunit)
ruditapes_c16048	multicellular organismal development	developmental processes	P	Zinc finger protein 521 (Ecotropic viral integration site 3 protein)
ruditapes_c16048	cell differentiation	other biological processes	P	Zinc finger protein 521 (Ecotropic viral integration site 3 protein)
ruditapes_c16048	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 521 (Ecotropic viral integration site 3 protein)
ruditapes_c16048	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 521 (Ecotropic viral integration site 3 protein)
ruditapes2_c687	regulation of Rho protein signal transduction	signal transduction	P	Pleckstrin homology domain-containing family G member 2 (PH domain-containing family G member 2) (Common site lymphoma/leukemia guanine nucleotide exchange factor) (Common site lymphoma/leukemia GEF)
ruditapes_c5470	regulation of Rho protein signal transduction	signal transduction	P	Pleckstrin homology domain-containing family G member 2 (PH domain-containing family G member 2) (Common site lymphoma/leukemia guanine nucleotide exchange factor) (Common site lymphoma/leukemia GEF)
ruditapes2_c2505	protein peptidyl-prolyl isomerization	protein metabolism	P	FK506-binding protein 1A (FKBP) (FkbA) (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rapamycin-binding protein)
ruditapes2_c2505	peptidyl-proline modification	protein metabolism	P	FK506-binding protein 1A (FKBP) (FkbA) (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rapamycin-binding protein)
ruditapes2_c2505	protein folding	protein metabolism	P	FK506-binding protein 1A (FKBP) (FkbA) (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rapamycin-binding protein)
ruditapes_c24117	heart development	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	arm morphogenesis	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	positive regulation of ossification	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	embryonic arm morphogenesis	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	positive regulation of histone deacetylation	protein metabolism	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	cognition	other biological processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	maintenance of mitotic sister chromatid cohesion	cell cycle and proliferation	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	maintenance of mitotic sister chromatid cohesion	cell organization and biogenesis	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	face morphogenesis	other biological processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	eye morphogenesis	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	mitotic sister chromatid cohesion	cell organization and biogenesis	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	embryonic cranial skeleton morphogenesis	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	cellular protein localization	other biological processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	external genitalia morphogenesis	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	regulation of developmental growth	other biological processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	brain development	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	ear morphogenesis	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	heart morphogenesis	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	mitotic sister chromatid cohesion	cell cycle and proliferation	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	embryonic digestive tract morphogenesis	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	regulation of embryonic development	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	embryonic viscerocranium morphogenesis	developmental processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	response to DNA damage stimulus	stress response	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	cell cycle	cell cycle and proliferation	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	fat cell differentiation	other biological processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	positive regulation of histone deacetylation	cell organization and biogenesis	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	positive regulation of multicellular organism growth	other biological processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	regulation of hair cycle	other biological processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	developmental growth	other biological processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c24117	sensory perception of sound	other biological processes	P	Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
ruditapes_c27668	metabolic process	other metabolic processes	P	Pseudohemocyanin-2 (Fragment)
ruditapes_c27668	oxygen transport	transport	P	Pseudohemocyanin-2 (Fragment)
ruditapes_c27668	oxidation reduction	other metabolic processes	P	Pseudohemocyanin-2 (Fragment)
ruditapes_c27668	transport	transport	P	Pseudohemocyanin-2 (Fragment)
ruditapes2_c6609	DNA replication	DNA metabolism	P	Thymidine kinase (EC 2.7.1.21)
ruditapes2_c6609	DNA metabolic process	DNA metabolism	P	Thymidine kinase (EC 2.7.1.21)
ruditapes2_c6609	phosphorylation	other metabolic processes	P	Thymidine kinase (EC 2.7.1.21)
ruditapes_c16965	phosphorylation	other metabolic processes	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_c16965	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_c16965	coenzyme A biosynthetic process	other metabolic processes	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_c16639	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c16639	glucose catabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c16639	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c1160	proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c1160	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c1160	ion transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c1160	transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c1160	ATP hydrolysis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c1160	ATP metabolic process	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c1160	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c1160	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit alpha (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
ruditapes_c21058	tRNA processing	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c21058	tRNA wobble uridine modification	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c26880	response to stress	stress response	P	Heat-inducible transcription repressor HrcA
ruditapes_c26880	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Heat-inducible transcription repressor HrcA
ruditapes_c26880	"transcription, DNA-dependent"	RNA metabolism	P	Heat-inducible transcription repressor HrcA
ruditapes_c13413	tRNA aminoacylation for protein translation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c13413	seryl-tRNA aminoacylation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c13413	seryl-tRNA aminoacylation	RNA metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c13413	translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c13413	tRNA aminoacylation for protein translation	protein metabolism	P	Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)
ruditapes_c15541	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c15541	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c15541	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_lrc32508	metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes_lrc25865	carbohydrate metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes2_c6207	metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes_c23523	carbohydrate metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes2_c6207	carbohydrate metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes_lrc32466	carbohydrate metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes_lrc25865	metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes_lrc34072	metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes_c23523	metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes2_c912	metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes_lrc32466	metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes2_c912	carbohydrate metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes_lrc34072	carbohydrate metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes_lrc32508	carbohydrate metabolic process	other metabolic processes	P	Putative beta-glucosidase 23 (Os5bglu23) (EC 3.2.1.21)
ruditapes_c8238	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c32641	metabolic process	other metabolic processes	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c8238	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c8238	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c32641	defense response to bacterium	stress response	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c32641	cytolysis	death	P	"Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)"
ruditapes_c18215	polysaccharide catabolic process	other metabolic processes	P	Endoglycoceramidase (EGCase) (EC 3.2.1.123) (Glycosphingolipid-specific enzyme) (GSL-specific enzyme)
ruditapes_c18215	carbohydrate metabolic process	other metabolic processes	P	Endoglycoceramidase (EGCase) (EC 3.2.1.123) (Glycosphingolipid-specific enzyme) (GSL-specific enzyme)
ruditapes_c18215	glycosphingolipid catabolic process	other metabolic processes	P	Endoglycoceramidase (EGCase) (EC 3.2.1.123) (Glycosphingolipid-specific enzyme) (GSL-specific enzyme)
ruditapes_c18215	cellulose catabolic process	other metabolic processes	P	Endoglycoceramidase (EGCase) (EC 3.2.1.123) (Glycosphingolipid-specific enzyme) (GSL-specific enzyme)
ruditapes_c18215	metabolic process	other metabolic processes	P	Endoglycoceramidase (EGCase) (EC 3.2.1.123) (Glycosphingolipid-specific enzyme) (GSL-specific enzyme)
ruditapes_c19463	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c19463	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c31084	glycine betaine biosynthetic process from choline	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c31084	oxidation reduction	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes_c31084	cellular alcohol metabolic process	other metabolic processes	P	Choline dehydrogenase (CDH) (CHD) (EC 1.1.99.1)
ruditapes2_c2408	carbohydrate metabolic process	other metabolic processes	P	Beta-galactosidase (Beta-gal) (EC 3.2.1.23) (Lactase)
ruditapes2_c2408	metabolic process	other metabolic processes	P	Beta-galactosidase (Beta-gal) (EC 3.2.1.23) (Lactase)
ruditapes_c16992	metabolic process	other metabolic processes	P	"Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8) (3'-phosphoadenylylsulfate reductase) (PAPS reductase, thioredoxin dependent) (PAPS sulfotransferase) (PAdoPS reductase)"
ruditapes_c16992	"sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)"	other metabolic processes	P	"Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8) (3'-phosphoadenylylsulfate reductase) (PAPS reductase, thioredoxin dependent) (PAPS sulfotransferase) (PAdoPS reductase)"
ruditapes_c16992	oxidation reduction	other metabolic processes	P	"Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8) (3'-phosphoadenylylsulfate reductase) (PAPS reductase, thioredoxin dependent) (PAPS sulfotransferase) (PAdoPS reductase)"
ruditapes_c16992	cysteine biosynthetic process	other metabolic processes	P	"Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8) (3'-phosphoadenylylsulfate reductase) (PAPS reductase, thioredoxin dependent) (PAPS sulfotransferase) (PAdoPS reductase)"
ruditapes_c17342	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c17342	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c17342	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c17342	cell division	other biological processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c17342	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c17342	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c6691	oxidation reduction	other metabolic processes	P	Putative reductase PBPRA2423 (EC 1.3.1.-)
ruditapes_c25600	lipoprotein transport	transport	P	Lipoprotein-releasing system ATP-binding protein LolD (EC 3.6.3.-)
ruditapes_c25600	transport	transport	P	Lipoprotein-releasing system ATP-binding protein LolD (EC 3.6.3.-)
ruditapes_c25600	ATP catabolic process	other metabolic processes	P	Lipoprotein-releasing system ATP-binding protein LolD (EC 3.6.3.-)
ruditapes2_c531	tRNA aminoacylation for protein translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes2_c531	tRNA aminoacylation for protein translation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes2_c531	translation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes2_c531	asparaginyl-tRNA aminoacylation	protein metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes2_c531	asparaginyl-tRNA aminoacylation	RNA metabolism	P	Asparagine--tRNA ligase (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)
ruditapes2_lrc3253	phosphorylation	other metabolic processes	P	Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase) (EC 2.7.8.25)
ruditapes_c12159	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c12159	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c15619	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c15619	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c15619	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c8090	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c12159	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c12159	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c8090	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c15619	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c8090	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c12159	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c8090	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c12159	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c8090	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c8090	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c15619	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c15619	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c21952	cellular amino acid biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c21952	methylation	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c21952	methionine biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c4916	translation	protein metabolism	P	Cysteine--tRNA ligase 1 (EC 6.1.1.16) (Cysteinyl-tRNA synthetase 1) (CysRS 1)
ruditapes_c4916	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase 1 (EC 6.1.1.16) (Cysteinyl-tRNA synthetase 1) (CysRS 1)
ruditapes_c4916	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase 1 (EC 6.1.1.16) (Cysteinyl-tRNA synthetase 1) (CysRS 1)
ruditapes_c4916	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase 1 (EC 6.1.1.16) (Cysteinyl-tRNA synthetase 1) (CysRS 1)
ruditapes_c4916	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase 1 (EC 6.1.1.16) (Cysteinyl-tRNA synthetase 1) (CysRS 1)
ruditapes_c9602	proline biosynthetic process	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes_c9602	cellular amino acid biosynthetic process	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes_c9602	phosphorylation	other metabolic processes	P	Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK)
ruditapes_c17272	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes_c17272	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes_c17272	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes_c17272	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes_c9457	phosphorylation	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_c9457	metabolic process	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) (EC 2.7.1.23)
ruditapes_c24274	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutH (Methyl-directed mismatch repair protein)
ruditapes_c24274	DNA modification	DNA metabolism	P	DNA mismatch repair protein MutH (Methyl-directed mismatch repair protein)
ruditapes_c24274	DNA repair	stress response	P	DNA mismatch repair protein MutH (Methyl-directed mismatch repair protein)
ruditapes_c24274	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutH (Methyl-directed mismatch repair protein)
ruditapes_s35228	regulation of RNA metabolic process	RNA metabolism	P	Putative regulator of ribonuclease activity
ruditapes_c7633	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 1 (FBPase class 1) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1)"
ruditapes_c17448	methanogenesis	other metabolic processes	P	CoB--CoM heterodisulfide reductase iron-sulfur subunit A (EC 1.8.98.1)
ruditapes_c17448	oxidation reduction	other metabolic processes	P	CoB--CoM heterodisulfide reductase iron-sulfur subunit A (EC 1.8.98.1)
ruditapes_c18476	one-carbon compound metabolic process	other metabolic processes	P	Tetrahydromethanopterin S-methyltransferase subunit C (EC 2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit C)
ruditapes_c18476	methylation	other metabolic processes	P	Tetrahydromethanopterin S-methyltransferase subunit C (EC 2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit C)
ruditapes_c18476	methanogenesis	other metabolic processes	P	Tetrahydromethanopterin S-methyltransferase subunit C (EC 2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit C)
ruditapes_c30088	biosynthetic process	other metabolic processes	P	LL-diaminopimelate aminotransferase (DAP-AT) (DAP-aminotransferase) (LL-DAP-aminotransferase) (EC 2.6.1.83)
ruditapes2_c1696	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes2_c1696	metabolic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes2_c1696	diaminopimelate biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes2_c1696	lysine biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes2_c1696	cellular amino acid biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c15980	translation	protein metabolism	P	50S ribosomal protein LX
ruditapes_c3386	translation	protein metabolism	P	Ribosome-recycling factor (RRF) (Ribosome-releasing factor)
ruditapes_c21701	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c21701	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c21701	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c4762	peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid	protein metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c4762	biopolymer modification	other metabolic processes	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes_c4762	RNA modification	RNA metabolism	P	Ribosomal protein S12 methylthiotransferase RimO (S12 MTTase) (S12 methylthiotransferase) (EC 2.-.-.-) (Ribosome maturation factor RimO)
ruditapes2_c2611	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c2611	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c2611	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c2611	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c2611	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c13757	terpenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c13757	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c13757	thiamin biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c13757	metabolic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c26481	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes2_c769	ribosome biogenesis	other biological processes	P	50S ribosomal protein L10
ruditapes_c14253	proteolysis	protein metabolism	P	Lon protease (EC 3.4.21.53) (ATP-dependent protease La)
ruditapes_c14253	response to stress	stress response	P	Lon protease (EC 3.4.21.53) (ATP-dependent protease La)
ruditapes_c9696	translation	protein metabolism	P	50S ribosomal protein L5
ruditapes_c180	carbohydrate metabolic process	other metabolic processes	P	Probable phosphoketolase (EC 4.1.2.-)
ruditapes_c180	metabolic process	other metabolic processes	P	Probable phosphoketolase (EC 4.1.2.-)
ruditapes2_c2	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes_c10449	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes_c17714	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes2_c444	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes_lrc17362	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes_c27634	fatty acid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c27634	metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c27634	lipid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c11257	estrogen biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c27634	oxidation reduction	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c11257	fatty acid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c11257	steroid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c11257	oxidation reduction	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c11257	metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c11257	androgen metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c11257	lipid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c27634	estrogen biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c27634	estrogen metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c11257	estrogen metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c27634	androgen metabolic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c27634	steroid biosynthetic process	other metabolic processes	P	Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (3-oxoacyl-[acyl-carrier-protein] reductase) (EC 1.1.1.-) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)
ruditapes_c18407	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit H (EC 1.6.99.5) (NADH dehydrogenase I subunit H) (NDH-1 subunit H)
ruditapes2_c2130	response to DNA damage stimulus	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2130	DNA recombination	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2130	SOS response	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2130	DNA repair	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2130	DNA repair	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_lrc7588	oxidation reduction	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes2_lrc7588	glycine metabolic process	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes_c28236	glucose catabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c28236	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c28236	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.1)"
ruditapes_c24621	tRNA aminoacylation for protein translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c24621	tRNA aminoacylation for protein translation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c24621	translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c24621	prolyl-tRNA aminoacylation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c24621	prolyl-tRNA aminoacylation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c26382	carbohydrate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c26382	phosphorylation	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c26382	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c26382	glycerol metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes2_c2850	DNA repair	stress response	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes2_c2850	DNA repair	DNA metabolism	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes2_c2850	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes2_c2850	response to DNA damage stimulus	stress response	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes2_c2850	DNA recombination	DNA metabolism	P	Putative Holliday junction resolvase (EC 3.1.-.-)
ruditapes_c16070	DNA repair	stress response	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_c16070	DNA repair	DNA metabolism	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_c16070	response to DNA damage stimulus	stress response	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_lrc28214	porphyrin biosynthetic process	other metabolic processes	P	Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_lrc28214	heme biosynthetic process	other metabolic processes	P	Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_lrc28214	tetrapyrrole biosynthetic process	other metabolic processes	P	Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_lrc28214	peptidyl-pyrromethane cofactor linkage	protein metabolism	P	Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c10784	growth	other biological processes	P	Uncharacterized PPE family protein PPE54
ruditapes_c10784	negative regulation by symbiont of host innate immunity	stress response	P	Uncharacterized PPE family protein PPE54
ruditapes_c28402	signal transduction	signal transduction	P	Teneurin-4 (Ten-4) (Protein Odd Oz/ten-m homolog 4) (Tenascin-M4) (Ten-m4) (Teneurin transmembrane protein 4)
ruditapes_c28402	gastrulation with mouth forming second	developmental processes	P	Teneurin-4 (Ten-4) (Protein Odd Oz/ten-m homolog 4) (Tenascin-M4) (Ten-m4) (Teneurin transmembrane protein 4)
ruditapes_c10126	DNA repair	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_c10126	DNA repair	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_c10126	response to DNA damage stimulus	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_c10126	SOS response	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_c10126	DNA recombination	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_c29738	translation	protein metabolism	P	50S ribosomal protein L36
ruditapes2_c2934	transport	transport	P	Probable menaquinol-cytochrome c reductase cytochrome b subunit (Cytochrome bc1 complex cytochrome b subunit)
ruditapes2_c2934	electron transport chain	other metabolic processes	P	Probable menaquinol-cytochrome c reductase cytochrome b subunit (Cytochrome bc1 complex cytochrome b subunit)
ruditapes2_c2934	respiratory electron transport chain	other metabolic processes	P	Probable menaquinol-cytochrome c reductase cytochrome b subunit (Cytochrome bc1 complex cytochrome b subunit)
ruditapes_c359	defense response	stress response	P	"Glucan endo-1,3-beta-glucosidase 8 (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 8) ((1->3)-beta-glucanase 8) (Beta-1,3-endoglucanase 8) (Beta-1,3-glucanase 8)"
ruditapes_c359	carbohydrate metabolic process	other metabolic processes	P	"Glucan endo-1,3-beta-glucosidase 8 (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 8) ((1->3)-beta-glucanase 8) (Beta-1,3-endoglucanase 8) (Beta-1,3-glucanase 8)"
ruditapes_c359	metabolic process	other metabolic processes	P	"Glucan endo-1,3-beta-glucosidase 8 (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 8) ((1->3)-beta-glucanase 8) (Beta-1,3-endoglucanase 8) (Beta-1,3-glucanase 8)"
ruditapes_c359	cell wall organization	cell organization and biogenesis	P	"Glucan endo-1,3-beta-glucosidase 8 (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 8) ((1->3)-beta-glucanase 8) (Beta-1,3-endoglucanase 8) (Beta-1,3-glucanase 8)"
ruditapes_c20266	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 32 (EC 2.7.11.1)
ruditapes_s40004	response to abscisic acid stimulus	other biological processes	P	Calcium-dependent protein kinase 32 (EC 2.7.11.1)
ruditapes_c20266	abscisic acid mediated signaling	signal transduction	P	Calcium-dependent protein kinase 32 (EC 2.7.11.1)
ruditapes_c20266	response to salt stress	stress response	P	Calcium-dependent protein kinase 32 (EC 2.7.11.1)
ruditapes_s40004	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 32 (EC 2.7.11.1)
ruditapes_s40004	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 32 (EC 2.7.11.1)
ruditapes_s40004	response to salt stress	stress response	P	Calcium-dependent protein kinase 32 (EC 2.7.11.1)
ruditapes_c20266	response to abscisic acid stimulus	other biological processes	P	Calcium-dependent protein kinase 32 (EC 2.7.11.1)
ruditapes_s40004	abscisic acid mediated signaling	signal transduction	P	Calcium-dependent protein kinase 32 (EC 2.7.11.1)
ruditapes_c20266	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 32 (EC 2.7.11.1)
ruditapes_c7571	response to stress	stress response	P	14.7 kDa heat shock protein (AtHsp14.7)
ruditapes_c7571	biological_process	other biological processes	P	14.7 kDa heat shock protein (AtHsp14.7)
ruditapes_s34368	lipid catabolic process	other metabolic processes	P	GDSL esterase/lipase At5g45920 (EC 3.1.1.-)
ruditapes_s34368	lipid metabolic process	other metabolic processes	P	GDSL esterase/lipase At5g45920 (EC 3.1.1.-)
ruditapes_c18213	DNA repair	stress response	P	Protein DAMAGED DNA-BINDING 2 (UV-damaged DNA-binding protein 2)
ruditapes_c18213	DNA repair	DNA metabolism	P	Protein DAMAGED DNA-BINDING 2 (UV-damaged DNA-binding protein 2)
ruditapes_c18213	response to DNA damage stimulus	stress response	P	Protein DAMAGED DNA-BINDING 2 (UV-damaged DNA-binding protein 2)
ruditapes_c18213	response to UV-B	other biological processes	P	Protein DAMAGED DNA-BINDING 2 (UV-damaged DNA-binding protein 2)
ruditapes_c27746	chloroplast organization	cell organization and biogenesis	P	"Ribonuclease II, chloroplastic/mitochondrial (AtmtRNaseII) (RNase II) (EC 3.1.13.1) (Protein EMBRYO DEFECTIVE 2730) (Ribonucleotide reductase 1)"
ruditapes_c27746	rRNA processing	RNA metabolism	P	"Ribonuclease II, chloroplastic/mitochondrial (AtmtRNaseII) (RNase II) (EC 3.1.13.1) (Protein EMBRYO DEFECTIVE 2730) (Ribonucleotide reductase 1)"
ruditapes_c15419	rhamnogalacturonan II biosynthetic process	other metabolic processes	P	2-dehydro-3-deoxyphosphooctonate aldolase 2 (EC 2.5.1.55) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthase) (KDO-8-phosphate synthase 2) (AtkdsA2) (KDO 8-P synthase) (KDOPS) (Phospho-2-dehydro-3-deoxyoctonate aldolase)
ruditapes_c15419	biosynthetic process	other metabolic processes	P	2-dehydro-3-deoxyphosphooctonate aldolase 2 (EC 2.5.1.55) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthase) (KDO-8-phosphate synthase 2) (AtkdsA2) (KDO 8-P synthase) (KDOPS) (Phospho-2-dehydro-3-deoxyoctonate aldolase)
ruditapes_c15419	metabolic process	other metabolic processes	P	2-dehydro-3-deoxyphosphooctonate aldolase 2 (EC 2.5.1.55) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthase) (KDO-8-phosphate synthase 2) (AtkdsA2) (KDO 8-P synthase) (KDOPS) (Phospho-2-dehydro-3-deoxyoctonate aldolase)
ruditapes2_c2520	oxidation reduction	other metabolic processes	P	NADPH-dependent diflavin oxidoreductase 1 (EC 1.6.-.-)
ruditapes_c12826	oxidation reduction	other metabolic processes	P	NADPH-dependent diflavin oxidoreductase 1 (EC 1.6.-.-)
ruditapes_c7572	Wnt receptor signaling pathway	signal transduction	P	Kelch-like protein 12
ruditapes_c7572	multicellular organismal development	developmental processes	P	Kelch-like protein 12
ruditapes_c9129	cell redox homeostasis	other biological processes	P	DnaJ homolog subfamily C member 10
ruditapes_c9129	protein folding	protein metabolism	P	DnaJ homolog subfamily C member 10
ruditapes_c9129	glycerol ether metabolic process	other metabolic processes	P	DnaJ homolog subfamily C member 10
ruditapes2_c1030	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 15 (Activator-recruited cofactor 105 kDa component) (ARC105) (xARC105) (Mediator complex subunit 15)
ruditapes2_c1030	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 15 (Activator-recruited cofactor 105 kDa component) (ARC105) (xARC105) (Mediator complex subunit 15)
ruditapes2_c1030	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 15 (Activator-recruited cofactor 105 kDa component) (ARC105) (xARC105) (Mediator complex subunit 15)
ruditapes_c19895	methylation	other metabolic processes	P	tRNA (guanine(10)-N2)-methyltransferase homolog (EC 2.1.1.-) (tRNA guanosine-2'-O-methyltransferase TRM11 homolog)
ruditapes_c19895	tRNA processing	RNA metabolism	P	tRNA (guanine(10)-N2)-methyltransferase homolog (EC 2.1.1.-) (tRNA guanosine-2'-O-methyltransferase TRM11 homolog)
ruditapes_c9214	dephosphorylation	other metabolic processes	P	Myotubularin-related protein 13 (SET-binding factor 2)
ruditapes_c749	protein transport	transport	P	Mitochondrial intermembrane space import and assembly protein 40-A (Coiled-coil-helix-coiled-coil-helix domain-containing protein 4-A)
ruditapes_c749	transport	transport	P	Mitochondrial intermembrane space import and assembly protein 40-A (Coiled-coil-helix-coiled-coil-helix domain-containing protein 4-A)
ruditapes_c8818	DNA replication	DNA metabolism	P	Chromosome transmission fidelity protein 18 homolog
ruditapes_c8818	cell cycle	cell cycle and proliferation	P	Chromosome transmission fidelity protein 18 homolog
ruditapes_c26781	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (Methyltransferase-like protein 1) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_c1509	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (Methyltransferase-like protein 1) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_c1509	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (Methyltransferase-like protein 1) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_c1509	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (Methyltransferase-like protein 1) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c26781	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (Methyltransferase-like protein 1) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c26781	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (Methyltransferase-like protein 1) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c3331	sphingolipid metabolic process	other metabolic processes	P	Proactivator polypeptide-like 1 [Cleaved into: Saposin A-like; Saposin B-Val-like; Saposin B-like; Saposin C-like; Saposin D-like]
ruditapes2_c3095	lipid metabolic process	other metabolic processes	P	Proactivator polypeptide-like 1 [Cleaved into: Saposin A-like; Saposin B-Val-like; Saposin B-like; Saposin C-like; Saposin D-like]
ruditapes_c3331	lipid metabolic process	other metabolic processes	P	Proactivator polypeptide-like 1 [Cleaved into: Saposin A-like; Saposin B-Val-like; Saposin B-like; Saposin C-like; Saposin D-like]
ruditapes2_c3095	sphingolipid metabolic process	other metabolic processes	P	Proactivator polypeptide-like 1 [Cleaved into: Saposin A-like; Saposin B-Val-like; Saposin B-like; Saposin C-like; Saposin D-like]
ruditapes_c12761	ribosome biogenesis	other biological processes	P	DDB1- and CUL4-associated factor 13 (WD repeat and SOF domain-containing protein 1)
ruditapes_c12761	rRNA processing	RNA metabolism	P	DDB1- and CUL4-associated factor 13 (WD repeat and SOF domain-containing protein 1)
ruditapes_c19979	intracellular protein transport	transport	P	AP-2 complex subunit mu-A (AP-2 mu-A chain) (Clathrin assembly protein complex 2 medium chain A) (Clathrin coat assembly protein AP50-A) (Clathrin coat-associated protein AP50-A) (Mu2-adaptin-A) (Plasma membrane adaptor AP-2 50 kDa protein A)
ruditapes_c19979	transport	transport	P	AP-2 complex subunit mu-A (AP-2 mu-A chain) (Clathrin assembly protein complex 2 medium chain A) (Clathrin coat assembly protein AP50-A) (Clathrin coat-associated protein AP50-A) (Mu2-adaptin-A) (Plasma membrane adaptor AP-2 50 kDa protein A)
ruditapes_c19979	vesicle-mediated transport	transport	P	AP-2 complex subunit mu-A (AP-2 mu-A chain) (Clathrin assembly protein complex 2 medium chain A) (Clathrin coat assembly protein AP50-A) (Clathrin coat-associated protein AP50-A) (Mu2-adaptin-A) (Plasma membrane adaptor AP-2 50 kDa protein A)
ruditapes_c17147	microtubule-based movement	other biological processes	P	Kinesin-like protein KIF24
ruditapes_c14229	positive regulation of fat cell differentiation	other biological processes	P	Fibronectin type III domain-containing protein 3B (Factor for adipocyte differentiation 104) (HCV NS5A-binding protein 37)
ruditapes_c9940	L-cysteine metabolic process	other metabolic processes	P	Cysteine dioxygenase type 1 (EC 1.13.11.20) (Cysteine dioxygenase type I) (CDO) (CDO-I)
ruditapes_c9940	oxidation reduction	other metabolic processes	P	Cysteine dioxygenase type 1 (EC 1.13.11.20) (Cysteine dioxygenase type I) (CDO) (CDO-I)
ruditapes_c10323	oxidation reduction	other metabolic processes	P	Cysteine dioxygenase type 1 (EC 1.13.11.20) (Cysteine dioxygenase type I) (CDO) (CDO-I)
ruditapes_c10323	L-cysteine metabolic process	other metabolic processes	P	Cysteine dioxygenase type 1 (EC 1.13.11.20) (Cysteine dioxygenase type I) (CDO) (CDO-I)
ruditapes2_c874	proline biosynthetic process	other metabolic processes	P	NADP-dependent oxidoreductase domain-containing protein 1 (EC 1.-.-.-) (Pyrroline-5-carboxylate reductase-like protein C14orf148)
ruditapes_c27160	oxidation reduction	other metabolic processes	P	NADP-dependent oxidoreductase domain-containing protein 1 (EC 1.-.-.-) (Pyrroline-5-carboxylate reductase-like protein C14orf148)
ruditapes2_c874	oxidation reduction	other metabolic processes	P	NADP-dependent oxidoreductase domain-containing protein 1 (EC 1.-.-.-) (Pyrroline-5-carboxylate reductase-like protein C14orf148)
ruditapes_c27160	proline biosynthetic process	other metabolic processes	P	NADP-dependent oxidoreductase domain-containing protein 1 (EC 1.-.-.-) (Pyrroline-5-carboxylate reductase-like protein C14orf148)
ruditapes_c9295	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	"transcription, DNA-dependent"	RNA metabolism	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	protection from non-homologous end joining at telomere	stress response	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	protection from non-homologous end joining at telomere	DNA metabolism	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	protection from non-homologous end joining at telomere	cell organization and biogenesis	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	telomere maintenance via telomere lengthening	DNA metabolism	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	telomere maintenance via telomere lengthening	cell organization and biogenesis	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	negative regulation of DNA recombination at telomere	DNA metabolism	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	negative regulation of DNA recombination at telomere	cell organization and biogenesis	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	regulation of double-strand break repair via homologous recombination	stress response	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c9295	regulation of double-strand break repair via homologous recombination	DNA metabolism	P	Telomeric repeat-binding factor 2-interacting protein 1 (TERF2-interacting telomeric protein 1) (TRF2-interacting telomeric protein 1) (Repressor/activator protein 1 homolog) (RAP1 homolog)
ruditapes_c11030	RNA metabolic process	RNA metabolism	P	Eukaryotic translation initiation factor 4 gamma 1 (eIF-4-gamma 1) (eIF-4G 1) (eIF-4G1)
ruditapes_c11030	translation	protein metabolism	P	Eukaryotic translation initiation factor 4 gamma 1 (eIF-4-gamma 1) (eIF-4G 1) (eIF-4G1)
ruditapes_c11030	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 4 gamma 1 (eIF-4-gamma 1) (eIF-4G 1) (eIF-4G1)
ruditapes_c11030	regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4 gamma 1 (eIF-4-gamma 1) (eIF-4G 1) (eIF-4G1)
ruditapes_c18445	protein homooligomerization	cell organization and biogenesis	P	"Signal peptide, CUB and EGF-like domain-containing protein 1"
ruditapes_c28816	biological_process	other biological processes	P	DNA annealing helicase and endonuclease ZRANB3 (Annealing helicase 2) (AH2) (Zinc finger Ran-binding domain-containing protein 3) [Includes: DNA annealing helicase ZRANB3 (EC 3.6.4.-); Endonuclease ZRANB3 (EC 3.1.-.-)]
ruditapes_c26408	biological_process	other biological processes	P	Coiled-coil domain-containing protein C16orf93 homolog
ruditapes_c7419	biological_process	other biological processes	P	ER membrane protein complex subunit 4 (Transmembrane protein 85)
ruditapes_c23428	metabolic process	other metabolic processes	P	Arylacetamide deacetylase-like 2 (EC 3.1.1.-)
ruditapes_c10118	biological_process	other biological processes	P	COP9 signalosome complex subunit 4 (Signalosome subunit 4)
ruditapes2_lrc4165	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc35057	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc32341	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc33154	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes2_lrc4825	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc36529	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes2_lrc5210	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc35449	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc33015	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc34207	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc32942	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_c16249	regulation of translation	protein metabolism	P	Protein quaking-B (Quaking-related protein)
ruditapes_c16249	transport	transport	P	Protein quaking-B (Quaking-related protein)
ruditapes_c16249	multicellular organismal development	developmental processes	P	Protein quaking-B (Quaking-related protein)
ruditapes_c16249	mRNA processing	RNA metabolism	P	Protein quaking-B (Quaking-related protein)
ruditapes_c16249	RNA splicing	RNA metabolism	P	Protein quaking-B (Quaking-related protein)
ruditapes_c16249	mRNA transport	transport	P	Protein quaking-B (Quaking-related protein)
ruditapes_c16249	cell differentiation	other biological processes	P	Protein quaking-B (Quaking-related protein)
ruditapes_c11852	proteolysis	protein metabolism	P	"Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (X-Pro aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble)"
ruditapes_c11852	bradykinin catabolic process	other metabolic processes	P	"Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (X-Pro aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble)"
ruditapes_c11852	cellular process	other biological processes	P	"Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (X-Pro aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble)"
ruditapes_c20815	biological_process	other biological processes	P	EF-hand calcium-binding domain-containing protein 6 (DJ-1-binding protein) (DJBP)
ruditapes_c20815	"regulation of transcription, DNA-dependent"	RNA metabolism	P	EF-hand calcium-binding domain-containing protein 6 (DJ-1-binding protein) (DJBP)
ruditapes_c20815	"transcription, DNA-dependent"	RNA metabolism	P	EF-hand calcium-binding domain-containing protein 6 (DJ-1-binding protein) (DJBP)
ruditapes_lrc34886	biological_process	other biological processes	P	HEAT repeat-containing protein 6
ruditapes_c30839	regulation of ARF protein signal transduction	signal transduction	P	PH and SEC7 domain-containing protein 2 (Pleckstrin homology and SEC7 domain-containing protein 2)
ruditapes2_c205	retinoid metabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (hPLB) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes2_c205	lipid catabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (hPLB) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes2_c205	steroid metabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (hPLB) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes2_c205	lipid metabolic process	other metabolic processes	P	"Phospholipase B1, membrane-associated (Phospholipase B) (hPLB) (Phospholipase B/lipase) (PLB/LIP) [Includes: Phospholipase A2 (EC 3.1.1.4); Lysophospholipase (EC 3.1.1.5)]"
ruditapes_c18134	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 1 homolog (Zfp-1) (Zinc finger protein 475)
ruditapes_c18134	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 1 homolog (Zfp-1) (Zinc finger protein 475)
ruditapes_c30037	biological_process	other biological processes	P	Uncharacterized protein C3orf67 homolog
ruditapes_s40324	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3) (eIF-3-gamma) (eIF3 p40 subunit)
ruditapes_s40324	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3) (eIF-3-gamma) (eIF3 p40 subunit)
ruditapes_c28839	protein amino acid phosphorylation	protein metabolism	P	Casein kinase I isoform delta-B (CKI-delta-B) (CKId-B) (EC 2.7.11.1)
ruditapes_c28839	Wnt receptor signaling pathway	signal transduction	P	Casein kinase I isoform delta-B (CKI-delta-B) (CKId-B) (EC 2.7.11.1)
ruditapes_c28839	phosphorylation	other metabolic processes	P	Casein kinase I isoform delta-B (CKI-delta-B) (CKId-B) (EC 2.7.11.1)
ruditapes_c23528	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 23 (Mediator complex subunit 23)
ruditapes_c23528	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 23 (Mediator complex subunit 23)
ruditapes_c27636	biological_process	other biological processes	P	Putative ATP-dependent RNA helicase DHX57 (EC 3.6.4.13) (DEAH box protein 57)
ruditapes_c24429	chromosome organization	cell organization and biogenesis	P	Structural maintenance of chromosomes flexible hinge domain-containing protein 1
ruditapes_c24429	"dosage compensation, by inactivation of X chromosome"	other metabolic processes	P	Structural maintenance of chromosomes flexible hinge domain-containing protein 1
ruditapes_c19437	response to ATP	other biological processes	P	Diacylglycerol kinase theta (DAG kinase theta) (EC 2.7.1.107) (Diglyceride kinase theta) (DGK-theta)
ruditapes_c19437	thrombin receptor signaling pathway	signal transduction	P	Diacylglycerol kinase theta (DAG kinase theta) (EC 2.7.1.107) (Diglyceride kinase theta) (DGK-theta)
ruditapes_c19437	phosphorylation	other metabolic processes	P	Diacylglycerol kinase theta (DAG kinase theta) (EC 2.7.1.107) (Diglyceride kinase theta) (DGK-theta)
ruditapes_c19437	protein kinase C signaling cascade	signal transduction	P	Diacylglycerol kinase theta (DAG kinase theta) (EC 2.7.1.107) (Diglyceride kinase theta) (DGK-theta)
ruditapes_c19437	G-protein coupled receptor protein signaling pathway	signal transduction	P	Diacylglycerol kinase theta (DAG kinase theta) (EC 2.7.1.107) (Diglyceride kinase theta) (DGK-theta)
ruditapes_c19437	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Diacylglycerol kinase theta (DAG kinase theta) (EC 2.7.1.107) (Diglyceride kinase theta) (DGK-theta)
ruditapes_c19437	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Diacylglycerol kinase theta (DAG kinase theta) (EC 2.7.1.107) (Diglyceride kinase theta) (DGK-theta)
ruditapes_c19437	signal transduction	signal transduction	P	Diacylglycerol kinase theta (DAG kinase theta) (EC 2.7.1.107) (Diglyceride kinase theta) (DGK-theta)
ruditapes_c20921	biological_process	other biological processes	P	FERM domain-containing protein 5
ruditapes2_c1286	biological_process	other biological processes	P	Leucine-rich repeat and WD repeat-containing protein KIAA1239
ruditapes_c29163	zinc ion transport	transport	P	Zinc transporter ZIP4 (Solute carrier family 39 member 4) (Zrt- and Irt-like protein 4) (ZIP-4)
ruditapes_c29163	transmembrane transport	transport	P	Zinc transporter ZIP4 (Solute carrier family 39 member 4) (Zrt- and Irt-like protein 4) (ZIP-4)
ruditapes_c29163	metal ion transport	transport	P	Zinc transporter ZIP4 (Solute carrier family 39 member 4) (Zrt- and Irt-like protein 4) (ZIP-4)
ruditapes_c29163	cellular response to zinc ion starvation	stress response	P	Zinc transporter ZIP4 (Solute carrier family 39 member 4) (Zrt- and Irt-like protein 4) (ZIP-4)
ruditapes_c29163	ion transport	transport	P	Zinc transporter ZIP4 (Solute carrier family 39 member 4) (Zrt- and Irt-like protein 4) (ZIP-4)
ruditapes_c29163	cellular zinc ion homeostasis	other biological processes	P	Zinc transporter ZIP4 (Solute carrier family 39 member 4) (Zrt- and Irt-like protein 4) (ZIP-4)
ruditapes_c29163	transport	transport	P	Zinc transporter ZIP4 (Solute carrier family 39 member 4) (Zrt- and Irt-like protein 4) (ZIP-4)
ruditapes_c5722	translation	protein metabolism	P	Probable ribosome biogenesis protein RLP24 (Ribosomal L24 domain-containing protein 1)
ruditapes_c5722	ribosome biogenesis	other biological processes	P	Probable ribosome biogenesis protein RLP24 (Ribosomal L24 domain-containing protein 1)
ruditapes_c20679	metabolic process	other metabolic processes	P	Echinoderm microtubule-associated protein-like 2 (EMAP-2)
ruditapes_c22649	tricarboxylic acid cycle	other metabolic processes	P	"2-oxoglutarate dehydrogenase, mitochondrial (EC 1.2.4.2) (2-oxoglutarate dehydrogenase complex component E1) (OGDC-E1) (Alpha-ketoglutarate dehydrogenase)"
ruditapes_c22649	metabolic process	other metabolic processes	P	"2-oxoglutarate dehydrogenase, mitochondrial (EC 1.2.4.2) (2-oxoglutarate dehydrogenase complex component E1) (OGDC-E1) (Alpha-ketoglutarate dehydrogenase)"
ruditapes_c22649	glycolysis	other metabolic processes	P	"2-oxoglutarate dehydrogenase, mitochondrial (EC 1.2.4.2) (2-oxoglutarate dehydrogenase complex component E1) (OGDC-E1) (Alpha-ketoglutarate dehydrogenase)"
ruditapes_c22649	oxidation reduction	other metabolic processes	P	"2-oxoglutarate dehydrogenase, mitochondrial (EC 1.2.4.2) (2-oxoglutarate dehydrogenase complex component E1) (OGDC-E1) (Alpha-ketoglutarate dehydrogenase)"
ruditapes_c31256	negative regulation of endopeptidase activity	other biological processes	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_c31256	"negative regulation of complement activation, lectin pathway"	stress response	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_c31256	"negative regulation of complement activation, lectin pathway"	protein metabolism	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_c31256	biological_process	other biological processes	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_c31256	"complement activation, classical pathway"	stress response	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_c31256	"complement activation, classical pathway"	protein metabolism	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_c31256	innate immune response	stress response	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_c31256	negative regulation of peptidase activity	other biological processes	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_c31256	regulation of proteolysis	protein metabolism	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_c31256	blood coagulation	stress response	P	Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1)
ruditapes_c15028	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"TATA box-binding protein-associated factor, RNA polymerase I, subunit C (TATA box-binding protein-associated factor 1C) (TBP-associated factor 1C) (Transcription initiation factor SL1/TIF-IB subunit C)"
ruditapes_c15028	"transcription, DNA-dependent"	RNA metabolism	P	"TATA box-binding protein-associated factor, RNA polymerase I, subunit C (TATA box-binding protein-associated factor 1C) (TBP-associated factor 1C) (Transcription initiation factor SL1/TIF-IB subunit C)"
ruditapes2_c2861	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 146
ruditapes2_c2861	signal transduction	signal transduction	P	Probable G-protein coupled receptor 146
ruditapes_lrc33839	nucleosome assembly	cell organization and biogenesis	P	Histone H3.3
ruditapes2_lrc3351	nucleosome assembly	cell organization and biogenesis	P	Histone H3.3
ruditapes2_lrc4110	nucleosome assembly	cell organization and biogenesis	P	Histone H3.3
ruditapes_lrc32855	nucleosome assembly	cell organization and biogenesis	P	Histone H3.3
ruditapes2_c698	transmembrane transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog (Translocase of outer membrane 40 kDa subunit homolog)
ruditapes2_c698	ion transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog (Translocase of outer membrane 40 kDa subunit homolog)
ruditapes2_c698	regulation of anion transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog (Translocase of outer membrane 40 kDa subunit homolog)
ruditapes2_c698	anion transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog (Translocase of outer membrane 40 kDa subunit homolog)
ruditapes2_c698	transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog (Translocase of outer membrane 40 kDa subunit homolog)
ruditapes2_c698	protein transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog (Translocase of outer membrane 40 kDa subunit homolog)
ruditapes2_c698	protein targeting to mitochondrion	transport	P	Mitochondrial import receptor subunit TOM40 homolog (Translocase of outer membrane 40 kDa subunit homolog)
ruditapes2_c698	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import receptor subunit TOM40 homolog (Translocase of outer membrane 40 kDa subunit homolog)
ruditapes2_c1073	rRNA processing	RNA metabolism	P	H/ACA ribonucleoprotein complex subunit 2-like protein (Nucleolar protein family A member 2-like protein) (snoRNP protein NHP2-like protein)
ruditapes2_c1073	ribosome biogenesis	other biological processes	P	H/ACA ribonucleoprotein complex subunit 2-like protein (Nucleolar protein family A member 2-like protein) (snoRNP protein NHP2-like protein)
ruditapes2_c1073	rRNA pseudouridine synthesis	RNA metabolism	P	H/ACA ribonucleoprotein complex subunit 2-like protein (Nucleolar protein family A member 2-like protein) (snoRNP protein NHP2-like protein)
ruditapes_c12660	RNA splicing	RNA metabolism	P	NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa protein)
ruditapes_c12660	mRNA processing	RNA metabolism	P	NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa protein)
ruditapes_c12660	ribosome biogenesis	other biological processes	P	NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa protein)
ruditapes_c30290	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.4.19.12) (Deubiquitinating enzyme 49) (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49)
ruditapes_c30290	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.4.19.12) (Deubiquitinating enzyme 49) (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49)
ruditapes_c32371	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3) (eIF-3-gamma) (eIF3 p40 subunit)
ruditapes_c32371	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3) (eIF-3-gamma) (eIF3 p40 subunit)
ruditapes_c32371	biological_process	other biological processes	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3) (eIF-3-gamma) (eIF3 p40 subunit)
ruditapes_c19012	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase PLK4 (EC 2.7.11.21) (Polo-like kinase 4) (PLK-4) (Serine/threonine-protein kinase Sak)
ruditapes_c19012	centriole replication	cell cycle and proliferation	P	Serine/threonine-protein kinase PLK4 (EC 2.7.11.21) (Polo-like kinase 4) (PLK-4) (Serine/threonine-protein kinase Sak)
ruditapes_c19012	centriole replication	cell organization and biogenesis	P	Serine/threonine-protein kinase PLK4 (EC 2.7.11.21) (Polo-like kinase 4) (PLK-4) (Serine/threonine-protein kinase Sak)
ruditapes_c19012	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase PLK4 (EC 2.7.11.21) (Polo-like kinase 4) (PLK-4) (Serine/threonine-protein kinase Sak)
ruditapes_c19012	positive regulation of centriole replication	cell cycle and proliferation	P	Serine/threonine-protein kinase PLK4 (EC 2.7.11.21) (Polo-like kinase 4) (PLK-4) (Serine/threonine-protein kinase Sak)
ruditapes_c19012	positive regulation of centriole replication	cell organization and biogenesis	P	Serine/threonine-protein kinase PLK4 (EC 2.7.11.21) (Polo-like kinase 4) (PLK-4) (Serine/threonine-protein kinase Sak)
ruditapes_lrc18275	metabolic process	other metabolic processes	P	Phospholipase D3 (PLD 3) (EC 3.1.4.4) (Choline phosphatase 3) (Phosphatidylcholine-hydrolyzing phospholipase D3)
ruditapes_lrc18275	lipid catabolic process	other metabolic processes	P	Phospholipase D3 (PLD 3) (EC 3.1.4.4) (Choline phosphatase 3) (Phosphatidylcholine-hydrolyzing phospholipase D3)
ruditapes_c1161	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2)
ruditapes_c1161	multicellular organismal development	developmental processes	P	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2)
ruditapes_c1161	positive regulation of gene expression	other metabolic processes	P	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2)
ruditapes_c1161	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2)
ruditapes_c1161	negative regulation of neuron differentiation	developmental processes	P	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2)
ruditapes_c1161	positive regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2)
ruditapes_c1161	negative regulation of gene expression	other metabolic processes	P	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2)
ruditapes_c1161	positive regulation of blood pressure	other biological processes	P	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2)
ruditapes_c1161	neuron fate commitment	developmental processes	P	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2)
ruditapes_c1161	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2)
ruditapes_c1161	embryonic digestive tract morphogenesis	developmental processes	P	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2)
ruditapes_lrc35746	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_s39823	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc32027	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc15452	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_c28117	iron-sulfur cluster assembly	other metabolic processes	P	"Glutaredoxin-related protein 5, mitochondrial (Monothiol glutaredoxin-5)"
ruditapes_c28117	cell redox homeostasis	other biological processes	P	"Glutaredoxin-related protein 5, mitochondrial (Monothiol glutaredoxin-5)"
ruditapes_c28117	hemopoiesis	developmental processes	P	"Glutaredoxin-related protein 5, mitochondrial (Monothiol glutaredoxin-5)"
ruditapes_c14958	biological_process	other biological processes	P	Mitochondrial nucleoid factor 1 (Mitochondrial protein M19)
ruditapes_c21185	proteolysis	protein metabolism	P	COP9 signalosome complex subunit 5 (Signalosome subunit 5) (EC 3.4.-.-)
ruditapes_c23336	protein modification process	protein metabolism	P	Lysosomal thioesterase PPT2-A (PPT-2-A) (EC 3.1.2.-)
ruditapes_c1405	translation	protein metabolism	P	"39S ribosomal protein L17, mitochondrial (L17mt) (MRP-L17)"
ruditapes_c4759	translation	protein metabolism	P	"39S ribosomal protein L17, mitochondrial (L17mt) (MRP-L17)"
ruditapes_c1603	translation	protein metabolism	P	"39S ribosomal protein L17, mitochondrial (L17mt) (MRP-L17)"
ruditapes_c8732	signal transduction	signal transduction	P	Stomatin-like protein 3 (SLP-3) (Stomatin-related olfactory protein)
ruditapes_c13820	zinc ion transport	transport	P	Zinc transporter ZIP10 (Solute carrier family 39 member 10) (Zrt- and Irt-like protein 10) (ZIP-10)
ruditapes_c13820	response to zinc ion	other biological processes	P	Zinc transporter ZIP10 (Solute carrier family 39 member 10) (Zrt- and Irt-like protein 10) (ZIP-10)
ruditapes_c13820	transmembrane transport	transport	P	Zinc transporter ZIP10 (Solute carrier family 39 member 10) (Zrt- and Irt-like protein 10) (ZIP-10)
ruditapes_c13820	ion transport	transport	P	Zinc transporter ZIP10 (Solute carrier family 39 member 10) (Zrt- and Irt-like protein 10) (ZIP-10)
ruditapes_c13820	metal ion transport	transport	P	Zinc transporter ZIP10 (Solute carrier family 39 member 10) (Zrt- and Irt-like protein 10) (ZIP-10)
ruditapes_c13820	transport	transport	P	Zinc transporter ZIP10 (Solute carrier family 39 member 10) (Zrt- and Irt-like protein 10) (ZIP-10)
ruditapes_c5255	peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine	protein metabolism	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	RNA splicing	RNA metabolism	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	cell differentiation	other biological processes	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	"regulation of nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	histone H4-R3 demethylation	protein metabolism	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	histone H4-R3 demethylation	cell organization and biogenesis	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	"transcription, DNA-dependent"	RNA metabolism	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	oxidation reduction	other metabolic processes	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	chromatin modification	cell organization and biogenesis	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	mRNA processing	RNA metabolism	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	multicellular organismal development	developmental processes	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	histone H3-R2 demethylation	protein metabolism	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	histone H3-R2 demethylation	cell organization and biogenesis	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	phagocytosis	transport	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	phagocytosis	cell organization and biogenesis	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_c5255	sprouting angiogenesis	developmental processes	P	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (EC 1.14.11.-) (Histone arginine demethylase JMJD6) (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Lysyl-hydroxylase JMJD6) (Peptide-lysine 5-dioxygenase JMJD6) (Phosphatidylserine receptor) (Protein PTDSR) (zfpsr)
ruditapes_lrc13186	regulation of small GTPase mediated signal transduction	signal transduction	P	Ras GTPase-activating protein 4 (Calcium-promoted Ras inactivator) (Ras p21 protein activator 4) (RasGAP-activating-like protein 2)
ruditapes_lrc13186	positive regulation of Ras GTPase activity	signal transduction	P	Ras GTPase-activating protein 4 (Calcium-promoted Ras inactivator) (Ras p21 protein activator 4) (RasGAP-activating-like protein 2)
ruditapes_lrc13186	signal transduction	signal transduction	P	Ras GTPase-activating protein 4 (Calcium-promoted Ras inactivator) (Ras p21 protein activator 4) (RasGAP-activating-like protein 2)
ruditapes_lrc13186	positive regulation of GTPase activity	other biological processes	P	Ras GTPase-activating protein 4 (Calcium-promoted Ras inactivator) (Ras p21 protein activator 4) (RasGAP-activating-like protein 2)
ruditapes_lrc13186	negative regulation of Ras protein signal transduction	signal transduction	P	Ras GTPase-activating protein 4 (Calcium-promoted Ras inactivator) (Ras p21 protein activator 4) (RasGAP-activating-like protein 2)
ruditapes_c4254	biological_process	other biological processes	P	Prolyl-tRNA synthetase associated domain-containing protein 1 (PrdX deacylase domain-containing protein 1)
ruditapes2_c1475	biological_process	other biological processes	P	Prolyl-tRNA synthetase associated domain-containing protein 1 (PrdX deacylase domain-containing protein 1)
ruditapes_c15696	mRNA processing	RNA metabolism	P	RNA-binding protein with serine-rich domain 1
ruditapes_c15696	RNA splicing	RNA metabolism	P	RNA-binding protein with serine-rich domain 1
ruditapes_c17165	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16) (Thyroid hormone receptor-associated protein 5) (Thyroid hormone receptor-associated protein complex 95 kDa component) (Trap95) (Vitamin D3 receptor-interacting protein complex 92 kDa component) (DRIP92)
ruditapes_c17165	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16) (Thyroid hormone receptor-associated protein 5) (Thyroid hormone receptor-associated protein complex 95 kDa component) (Trap95) (Vitamin D3 receptor-interacting protein complex 92 kDa component) (DRIP92)
ruditapes_c17165	transcription initiation from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16) (Thyroid hormone receptor-associated protein 5) (Thyroid hormone receptor-associated protein complex 95 kDa component) (Trap95) (Vitamin D3 receptor-interacting protein complex 92 kDa component) (DRIP92)
ruditapes_c17165	transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16) (Thyroid hormone receptor-associated protein 5) (Thyroid hormone receptor-associated protein complex 95 kDa component) (Trap95) (Vitamin D3 receptor-interacting protein complex 92 kDa component) (DRIP92)
ruditapes_c17165	transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16) (Thyroid hormone receptor-associated protein 5) (Thyroid hormone receptor-associated protein complex 95 kDa component) (Trap95) (Vitamin D3 receptor-interacting protein complex 92 kDa component) (DRIP92)
ruditapes_c17165	androgen receptor signaling pathway	signal transduction	P	Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16) (Thyroid hormone receptor-associated protein 5) (Thyroid hormone receptor-associated protein complex 95 kDa component) (Trap95) (Vitamin D3 receptor-interacting protein complex 92 kDa component) (DRIP92)
ruditapes_c17165	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16) (Thyroid hormone receptor-associated protein 5) (Thyroid hormone receptor-associated protein complex 95 kDa component) (Trap95) (Vitamin D3 receptor-interacting protein complex 92 kDa component) (DRIP92)
ruditapes_c10674	"retrograde transport, endosome to Golgi"	transport	P	WASH complex subunit FAM21
ruditapes_c10674	transport	transport	P	WASH complex subunit FAM21
ruditapes_lrc23464	biological_process	other biological processes	P	Protein FAM132B (Complement C1q tumor necrosis factor-related protein 15) (Myonectin)
ruditapes_c10392	pronephros development	developmental processes	P	TRAF3-interacting protein 1
ruditapes_c10392	cilium assembly	cell organization and biogenesis	P	TRAF3-interacting protein 1
ruditapes_c20785	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator protein Pur-beta (Purine-rich element-binding protein B)
ruditapes_c20785	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator protein Pur-beta (Purine-rich element-binding protein B)
ruditapes_c22342	ribonucleoprotein complex assembly	cell organization and biogenesis	P	Protein SHQ1 homolog
ruditapes_c13818	ribonucleoprotein complex assembly	cell organization and biogenesis	P	Protein SHQ1 homolog
ruditapes_c7335	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 24 (Mediator complex subunit 24)
ruditapes_c7335	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 24 (Mediator complex subunit 24)
ruditapes2_c6420	positive regulation of Golgi to plasma membrane protein transport	transport	P	Consortin
ruditapes2_c6420	negative regulation of phosphatase activity	other metabolic processes	P	Consortin
ruditapes_c14541	oxidation reduction	other metabolic processes	P	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 (EC 1.14.11.-)
ruditapes_lrc15509	ion transport	transport	P	Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 3.6.3.49) (cAMP-dependent chloride channel)
ruditapes_lrc15509	transmembrane transport	transport	P	Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 3.6.3.49) (cAMP-dependent chloride channel)
ruditapes_lrc15509	chloride transport	transport	P	Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 3.6.3.49) (cAMP-dependent chloride channel)
ruditapes_lrc15509	transport	transport	P	Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 3.6.3.49) (cAMP-dependent chloride channel)
ruditapes_lrc15509	ATP catabolic process	other metabolic processes	P	Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 3.6.3.49) (cAMP-dependent chloride channel)
ruditapes_c8017	DNA recombination	DNA metabolism	P	Structural maintenance of chromosomes protein 1 (SMC protein 1) (SMC-1) (Chromosome segregation protein SMC-1) (Cohesin complex subunit SMC-1) (Protein TITAN8)
ruditapes_c8017	chromosome organization	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 1 (SMC protein 1) (SMC-1) (Chromosome segregation protein SMC-1) (Cohesin complex subunit SMC-1) (Protein TITAN8)
ruditapes_c8017	chromosome condensation	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 1 (SMC protein 1) (SMC-1) (Chromosome segregation protein SMC-1) (Cohesin complex subunit SMC-1) (Protein TITAN8)
ruditapes_c8017	sister chromatid cohesion	cell cycle and proliferation	P	Structural maintenance of chromosomes protein 1 (SMC protein 1) (SMC-1) (Chromosome segregation protein SMC-1) (Cohesin complex subunit SMC-1) (Protein TITAN8)
ruditapes_c8017	sister chromatid cohesion	cell organization and biogenesis	P	Structural maintenance of chromosomes protein 1 (SMC protein 1) (SMC-1) (Chromosome segregation protein SMC-1) (Cohesin complex subunit SMC-1) (Protein TITAN8)
ruditapes_c8017	DNA repair	stress response	P	Structural maintenance of chromosomes protein 1 (SMC protein 1) (SMC-1) (Chromosome segregation protein SMC-1) (Cohesin complex subunit SMC-1) (Protein TITAN8)
ruditapes_c8017	DNA repair	DNA metabolism	P	Structural maintenance of chromosomes protein 1 (SMC protein 1) (SMC-1) (Chromosome segregation protein SMC-1) (Cohesin complex subunit SMC-1) (Protein TITAN8)
ruditapes_c20874	lipid metabolic process	other metabolic processes	P	Venom phospholipase A1 2 (EC 3.1.1.32) (allergen Pol d 1.02) (Fragment)
ruditapes_c20874	cytolysis	death	P	Venom phospholipase A1 2 (EC 3.1.1.32) (allergen Pol d 1.02) (Fragment)
ruditapes_c20874	lipid catabolic process	other metabolic processes	P	Venom phospholipase A1 2 (EC 3.1.1.32) (allergen Pol d 1.02) (Fragment)
ruditapes_c13050	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_s34454	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_s34454	viral genome replication	other biological processes	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_s34454	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c13050	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c13050	viral genome replication	other biological processes	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c4281	positive regulation of catalytic activity	other biological processes	P	"Protein ISD11 (Iron-sulfur protein biogenesis, desulfurase-interacting protein 11)"
ruditapes_c4281	iron-sulfur cluster assembly	other metabolic processes	P	"Protein ISD11 (Iron-sulfur protein biogenesis, desulfurase-interacting protein 11)"
ruditapes_c27889	cellular lipid metabolic process	other metabolic processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	organ regeneration	developmental processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	lipid transport	transport	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	acylglycerol homeostasis	other biological processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	transport	transport	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	tissue regeneration	stress response	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	cholesterol homeostasis	other biological processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	response to hormone stimulus	other biological processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	positive regulation of triglyceride catabolic process	other metabolic processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	triglyceride-rich lipoprotein particle remodeling	cell organization and biogenesis	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	positive regulation of receptor-mediated endocytosis	transport	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	positive regulation of receptor-mediated endocytosis	cell organization and biogenesis	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	positive regulation of very-low-density lipoprotein particle remodeling	cell organization and biogenesis	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	triglyceride catabolic process	other metabolic processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	positive regulation of lipoprotein lipase activity	other biological processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	tissue regeneration	developmental processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	lipoprotein metabolic process	other metabolic processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	triglyceride homeostasis	other biological processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	triglyceride metabolic process	other metabolic processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	positive regulation of fatty acid biosynthetic process	other metabolic processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_c27889	positive regulation of lipid catabolic process	other metabolic processes	P	Apolipoprotein A-V (Apo-AV) (ApoA-V) (Apolipoprotein A5) (Regeneration-associated protein 3)
ruditapes_lrc34178	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_lrc39605	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_lrc38889	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_lrc36260	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_s36606	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes2_lrc5090	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_lrc33547	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_lrc34766	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_lrc33333	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes2_c609	Notch signaling pathway	signal transduction	P	Gamma-secretase subunit PEN-2 (Liver regeneration-related protein LRRGT00140) (Presenilin enhancer protein 2)
ruditapes2_c609	protein processing	protein metabolism	P	Gamma-secretase subunit PEN-2 (Liver regeneration-related protein LRRGT00140) (Presenilin enhancer protein 2)
ruditapes2_c609	positive regulation of catalytic activity	other biological processes	P	Gamma-secretase subunit PEN-2 (Liver regeneration-related protein LRRGT00140) (Presenilin enhancer protein 2)
ruditapes2_c609	membrane protein ectodomain proteolysis	protein metabolism	P	Gamma-secretase subunit PEN-2 (Liver regeneration-related protein LRRGT00140) (Presenilin enhancer protein 2)
ruditapes2_c3087	metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes_lrc33053	carbohydrate metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes_lrc39953	carbohydrate metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes_lrc21190	xylan catabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes_lrc39953	xylan catabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes2_c5986	metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes2_c3087	xylan catabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes2_c3087	carbohydrate metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes2_c5986	carbohydrate metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes_lrc21190	carbohydrate metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes_lrc39953	metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes_lrc21190	metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes_lrc33053	xylan catabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes2_c5986	xylan catabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes_lrc33053	metabolic process	other metabolic processes	P	"Endo-1,4-beta-xylanase 6 (Xylanase 6) (EC 3.2.1.8) (1,4-beta-D-xylan xylanohydrolase 6)"
ruditapes_lrc37147	translation	protein metabolism	P	60S ribosomal protein L6
ruditapes2_c5134	translation	protein metabolism	P	60S ribosomal protein L6
ruditapes_lrc32261	translation	protein metabolism	P	60S ribosomal protein L6
ruditapes_s38316	translation	protein metabolism	P	60S ribosomal protein L21
ruditapes_s25210	red or far red light signaling pathway	signal transduction	P	DNA damage-binding protein 1 (High pigmentation protein 1) (UV-damaged DNA-binding protein 1)
ruditapes_s25210	"red, far-red light phototransduction"	other biological processes	P	DNA damage-binding protein 1 (High pigmentation protein 1) (UV-damaged DNA-binding protein 1)
ruditapes2_c2634	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes2_c2634	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_lrc28521	protein amino acid phosphorylation	protein metabolism	P	Protein STRUBBELIG-RECEPTOR FAMILY 8 (Leucine-rich repeat receptor kinase-like protein SRF8)
ruditapes2_c4031	response to DNA damage stimulus	stress response	P	Endonuclease 8-like 2 (EC 3.2.2.-) (EC 4.2.99.18) (DNA glycosylase/AP lyase Neil2) (DNA-(apurinic or apyrimidinic site) lyase Neil2) (Endonuclease VIII-like 2) (Nei homolog 2) (NEH2) (Nei-like protein 2)
ruditapes2_c4031	metabolic process	other metabolic processes	P	Endonuclease 8-like 2 (EC 3.2.2.-) (EC 4.2.99.18) (DNA glycosylase/AP lyase Neil2) (DNA-(apurinic or apyrimidinic site) lyase Neil2) (Endonuclease VIII-like 2) (Nei homolog 2) (NEH2) (Nei-like protein 2)
ruditapes2_c4031	base-excision repair	stress response	P	Endonuclease 8-like 2 (EC 3.2.2.-) (EC 4.2.99.18) (DNA glycosylase/AP lyase Neil2) (DNA-(apurinic or apyrimidinic site) lyase Neil2) (Endonuclease VIII-like 2) (Nei homolog 2) (NEH2) (Nei-like protein 2)
ruditapes2_c4031	base-excision repair	DNA metabolism	P	Endonuclease 8-like 2 (EC 3.2.2.-) (EC 4.2.99.18) (DNA glycosylase/AP lyase Neil2) (DNA-(apurinic or apyrimidinic site) lyase Neil2) (Endonuclease VIII-like 2) (Nei homolog 2) (NEH2) (Nei-like protein 2)
ruditapes2_c4031	DNA repair	stress response	P	Endonuclease 8-like 2 (EC 3.2.2.-) (EC 4.2.99.18) (DNA glycosylase/AP lyase Neil2) (DNA-(apurinic or apyrimidinic site) lyase Neil2) (Endonuclease VIII-like 2) (Nei homolog 2) (NEH2) (Nei-like protein 2)
ruditapes2_c4031	DNA repair	DNA metabolism	P	Endonuclease 8-like 2 (EC 3.2.2.-) (EC 4.2.99.18) (DNA glycosylase/AP lyase Neil2) (DNA-(apurinic or apyrimidinic site) lyase Neil2) (Endonuclease VIII-like 2) (Nei homolog 2) (NEH2) (Nei-like protein 2)
ruditapes2_c4031	nucleotide-excision repair	stress response	P	Endonuclease 8-like 2 (EC 3.2.2.-) (EC 4.2.99.18) (DNA glycosylase/AP lyase Neil2) (DNA-(apurinic or apyrimidinic site) lyase Neil2) (Endonuclease VIII-like 2) (Nei homolog 2) (NEH2) (Nei-like protein 2)
ruditapes2_c4031	nucleotide-excision repair	DNA metabolism	P	Endonuclease 8-like 2 (EC 3.2.2.-) (EC 4.2.99.18) (DNA glycosylase/AP lyase Neil2) (DNA-(apurinic or apyrimidinic site) lyase Neil2) (Endonuclease VIII-like 2) (Nei homolog 2) (NEH2) (Nei-like protein 2)
ruditapes_c11064	biological_process	other biological processes	P	Toll-like receptor 13
ruditapes_c11064	signal transduction	signal transduction	P	Toll-like receptor 13
ruditapes_c11064	inflammatory response	stress response	P	Toll-like receptor 13
ruditapes_c11064	innate immune response	stress response	P	Toll-like receptor 13
ruditapes_c18469	transport	transport	P	Phosphate transporter PHO1 homolog 5 (Protein PHO1 homolog 5) (AtPHO1;H5)
ruditapes_c1371	phosphate transport	transport	P	Phosphate transporter PHO1 homolog 5 (Protein PHO1 homolog 5) (AtPHO1;H5)
ruditapes_c1371	transport	transport	P	Phosphate transporter PHO1 homolog 5 (Protein PHO1 homolog 5) (AtPHO1;H5)
ruditapes_c18469	phosphate transport	transport	P	Phosphate transporter PHO1 homolog 5 (Protein PHO1 homolog 5) (AtPHO1;H5)
ruditapes_c16240	oogenesis	other biological processes	P	Vitellogenin [Cleaved into: Vitellin]
ruditapes_c16240	lipid transport	transport	P	Vitellogenin [Cleaved into: Vitellin]
ruditapes_c16240	transport	transport	P	Vitellogenin [Cleaved into: Vitellin]
ruditapes_c19409	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes_c30857	sodium ion transport	transport	P	Electrogenic sodium bicarbonate cotransporter 4 (Solute carrier family 4 member 5)
ruditapes_c30857	anion transport	transport	P	Electrogenic sodium bicarbonate cotransporter 4 (Solute carrier family 4 member 5)
ruditapes_c30857	transport	transport	P	Electrogenic sodium bicarbonate cotransporter 4 (Solute carrier family 4 member 5)
ruditapes_c30857	regulation of pH	other biological processes	P	Electrogenic sodium bicarbonate cotransporter 4 (Solute carrier family 4 member 5)
ruditapes_c30857	ion transport	transport	P	Electrogenic sodium bicarbonate cotransporter 4 (Solute carrier family 4 member 5)
ruditapes2_c2197	actin cytoskeleton organization	cell organization and biogenesis	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	positive regulation of DNA replication	DNA metabolism	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	regulation of cell migration	other biological processes	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	mast cell chemotaxis	other biological processes	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	actin filament organization	cell organization and biogenesis	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	cell proliferation	cell cycle and proliferation	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	GTP catabolic process	other metabolic processes	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	small GTPase mediated signal transduction	signal transduction	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	bone resorption	other biological processes	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	chemotaxis	other biological processes	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	cell motion	other biological processes	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	Rac protein signal transduction	signal transduction	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes2_c2197	cell motility	other biological processes	P	Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
ruditapes_c7828	metabolic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit alpha (Na(+)/K(+) ATPase alpha subunit) (EC 3.6.3.9) (Sodium pump subunit alpha) (TNaK1-alpha)
ruditapes_c7828	ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha (Na(+)/K(+) ATPase alpha subunit) (EC 3.6.3.9) (Sodium pump subunit alpha) (TNaK1-alpha)
ruditapes_c7828	cation transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha (Na(+)/K(+) ATPase alpha subunit) (EC 3.6.3.9) (Sodium pump subunit alpha) (TNaK1-alpha)
ruditapes_c7828	ATP biosynthetic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit alpha (Na(+)/K(+) ATPase alpha subunit) (EC 3.6.3.9) (Sodium pump subunit alpha) (TNaK1-alpha)
ruditapes_c7828	sodium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha (Na(+)/K(+) ATPase alpha subunit) (EC 3.6.3.9) (Sodium pump subunit alpha) (TNaK1-alpha)
ruditapes_c7828	transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha (Na(+)/K(+) ATPase alpha subunit) (EC 3.6.3.9) (Sodium pump subunit alpha) (TNaK1-alpha)
ruditapes_c7828	potassium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha (Na(+)/K(+) ATPase alpha subunit) (EC 3.6.3.9) (Sodium pump subunit alpha) (TNaK1-alpha)
ruditapes_c7828	monovalent inorganic cation transport	transport	P	Sodium/potassium-transporting ATPase subunit alpha (Na(+)/K(+) ATPase alpha subunit) (EC 3.6.3.9) (Sodium pump subunit alpha) (TNaK1-alpha)
ruditapes_c22699	lipid metabolic process	other metabolic processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	smooth muscle contraction involved in micturition	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	urinary bladder smooth muscle contraction	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	response to chemical stimulus	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	ion transport	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	catagen	developmental processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	thermoception	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	response to pain	stress response	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	temperature homeostasis	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	behavioral response to pain	stress response	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	transport	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	peptide secretion	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	diet induced thermogenesis	other metabolic processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	fever	stress response	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	detection of chemical stimulus involved in sensory perception of pain	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	transmembrane calcium ion transport	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	transmembrane transport	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	sensory perception of pain	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	calcium ion transport	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c22699	sensory perception of mechanical stimulus	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c737	polysaccharide catabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14)
ruditapes_c737	carbohydrate metabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14)
ruditapes_c737	chitin catabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14)
ruditapes_c737	production of molecular mediator of acute inflammatory response	stress response	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14)
ruditapes_c737	metabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14)
ruditapes_c737	inflammatory response	stress response	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14)
ruditapes_c737	chitin metabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14)
ruditapes_c737	apoptosis	death	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14)
ruditapes_c18894	transport	transport	P	Kinesin-related protein 13 (Kinesin family member 13) (Kinesin-5)
ruditapes_c18894	mitosis	cell cycle and proliferation	P	Kinesin-related protein 13 (Kinesin family member 13) (Kinesin-5)
ruditapes_c18894	mitosis	cell organization and biogenesis	P	Kinesin-related protein 13 (Kinesin family member 13) (Kinesin-5)
ruditapes_c18894	cell cycle	cell cycle and proliferation	P	Kinesin-related protein 13 (Kinesin family member 13) (Kinesin-5)
ruditapes_c18894	spindle stabilization	cell cycle and proliferation	P	Kinesin-related protein 13 (Kinesin family member 13) (Kinesin-5)
ruditapes_c18894	spindle stabilization	protein metabolism	P	Kinesin-related protein 13 (Kinesin family member 13) (Kinesin-5)
ruditapes_c18894	spindle stabilization	cell organization and biogenesis	P	Kinesin-related protein 13 (Kinesin family member 13) (Kinesin-5)
ruditapes_c18894	cell division	other biological processes	P	Kinesin-related protein 13 (Kinesin family member 13) (Kinesin-5)
ruditapes_c18894	microtubule-based movement	other biological processes	P	Kinesin-related protein 13 (Kinesin family member 13) (Kinesin-5)
ruditapes_c18894	spindle elongation	cell cycle and proliferation	P	Kinesin-related protein 13 (Kinesin family member 13) (Kinesin-5)
ruditapes_c18894	spindle elongation	cell organization and biogenesis	P	Kinesin-related protein 13 (Kinesin family member 13) (Kinesin-5)
ruditapes_c20336	carpel development	developmental processes	P	Zinc finger protein JAGGED-like (Zinc finger protein NUBBIN)
ruditapes_c20336	anther development	developmental processes	P	Zinc finger protein JAGGED-like (Zinc finger protein NUBBIN)
ruditapes_c20336	stamen development	developmental processes	P	Zinc finger protein JAGGED-like (Zinc finger protein NUBBIN)
ruditapes_c20336	multicellular organismal development	developmental processes	P	Zinc finger protein JAGGED-like (Zinc finger protein NUBBIN)
ruditapes_c20336	cell differentiation	other biological processes	P	Zinc finger protein JAGGED-like (Zinc finger protein NUBBIN)
ruditapes_c15417	viral capsid assembly	cell organization and biogenesis	P	Triplex capsid protein 22 (Capsid protein VP19C)
ruditapes_c19080	proteolysis	protein metabolism	P	Coagulation factor IX (EC 3.4.21.22) (Christmas factor) [Cleaved into: Coagulation factor IXa light chain; Coagulation factor IXa heavy chain]
ruditapes_c19080	blood coagulation	stress response	P	Coagulation factor IX (EC 3.4.21.22) (Christmas factor) [Cleaved into: Coagulation factor IXa light chain; Coagulation factor IXa heavy chain]
ruditapes_c11231	fatty acid metabolic process	other metabolic processes	P	"Acyl-coenzyme A synthetase ACSM3, mitochondrial (EC 6.2.1.2) (Acyl-CoA synthetase medium-chain family member 3) (Butyrate--CoA ligase 3) (Butyryl-coenzyme A synthetase 3) (Middle-chain acyl-CoA synthetase 3) (SA rat hypertension-associated protein) (Protein SA)"
ruditapes_c11231	lipid metabolic process	other metabolic processes	P	"Acyl-coenzyme A synthetase ACSM3, mitochondrial (EC 6.2.1.2) (Acyl-CoA synthetase medium-chain family member 3) (Butyrate--CoA ligase 3) (Butyryl-coenzyme A synthetase 3) (Middle-chain acyl-CoA synthetase 3) (SA rat hypertension-associated protein) (Protein SA)"
ruditapes_c11231	metabolic process	other metabolic processes	P	"Acyl-coenzyme A synthetase ACSM3, mitochondrial (EC 6.2.1.2) (Acyl-CoA synthetase medium-chain family member 3) (Butyrate--CoA ligase 3) (Butyryl-coenzyme A synthetase 3) (Middle-chain acyl-CoA synthetase 3) (SA rat hypertension-associated protein) (Protein SA)"
ruditapes_c11231	biological_process	other biological processes	P	"Acyl-coenzyme A synthetase ACSM3, mitochondrial (EC 6.2.1.2) (Acyl-CoA synthetase medium-chain family member 3) (Butyrate--CoA ligase 3) (Butyryl-coenzyme A synthetase 3) (Middle-chain acyl-CoA synthetase 3) (SA rat hypertension-associated protein) (Protein SA)"
ruditapes2_c3466	oxidation reduction	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes2_c3466	superoxide metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes2_c3729	oxidation reduction	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes2_c3729	superoxide metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes2_lrc4115	negative regulation of peptidase activity	other biological processes	P	Cystatin
ruditapes2_lrc4236	negative regulation of peptidase activity	other biological processes	P	Cystatin
ruditapes2_lrc3790	negative regulation of peptidase activity	other biological processes	P	Cystatin
ruditapes2_lrc4093	negative regulation of peptidase activity	other biological processes	P	Cystatin
ruditapes2_c149	transport	transport	P	Stress-associated endoplasmic reticulum protein 2 (Ribosome-associated membrane protein RAMP4-2)
ruditapes2_c149	biological_process	other biological processes	P	Stress-associated endoplasmic reticulum protein 2 (Ribosome-associated membrane protein RAMP4-2)
ruditapes2_c149	protein transport	transport	P	Stress-associated endoplasmic reticulum protein 2 (Ribosome-associated membrane protein RAMP4-2)
ruditapes_c22242	DNA repair	stress response	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c22242	DNA repair	DNA metabolism	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c22242	response to DNA damage stimulus	stress response	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c22242	methylation	other metabolic processes	P	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)
ruditapes_c15255	translation	protein metabolism	P	"Tyrosine--tRNA ligase, cytoplasmic (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)"
ruditapes_c15255	tRNA aminoacylation for protein translation	protein metabolism	P	"Tyrosine--tRNA ligase, cytoplasmic (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)"
ruditapes_c15255	tRNA aminoacylation for protein translation	RNA metabolism	P	"Tyrosine--tRNA ligase, cytoplasmic (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)"
ruditapes_c15255	tyrosyl-tRNA aminoacylation	protein metabolism	P	"Tyrosine--tRNA ligase, cytoplasmic (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)"
ruditapes_c15255	tyrosyl-tRNA aminoacylation	RNA metabolism	P	"Tyrosine--tRNA ligase, cytoplasmic (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)"
ruditapes2_c1166	cyclic nucleotide biosynthetic process	other metabolic processes	P	Guanylate cyclase 2G (EC 4.6.1.2) (Guanylyl cyclase receptor G) (mGC-G)
ruditapes2_c1166	cGMP biosynthetic process	other metabolic processes	P	Guanylate cyclase 2G (EC 4.6.1.2) (Guanylyl cyclase receptor G) (mGC-G)
ruditapes2_c1166	protein amino acid phosphorylation	protein metabolism	P	Guanylate cyclase 2G (EC 4.6.1.2) (Guanylyl cyclase receptor G) (mGC-G)
ruditapes_c29325	transport	transport	P	Membrane magnesium transporter 1 (ER membrane protein complex subunit 5) (Transmembrane protein 32)
ruditapes_c29325	magnesium ion transport	transport	P	Membrane magnesium transporter 1 (ER membrane protein complex subunit 5) (Transmembrane protein 32)
ruditapes_c27172	signal transduction	signal transduction	P	D(4) dopamine receptor (Dopamine D4 receptor)
ruditapes_c27172	G-protein coupled receptor protein signaling pathway	signal transduction	P	D(4) dopamine receptor (Dopamine D4 receptor)
ruditapes_c27172	dopamine receptor signaling pathway	signal transduction	P	D(4) dopamine receptor (Dopamine D4 receptor)
ruditapes_s38493	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (KCPI1) (Phytocystatin) (allergen Act d 4)
ruditapes_s38493	defense response	stress response	P	Cysteine proteinase inhibitor 1 (KCPI1) (Phytocystatin) (allergen Act d 4)
ruditapes2_c1671	viral genome replication	other biological processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: Ubiquitin thioesterase (EC 3.4.19.12); RNA-directed RNA polymerase (EC 2.7.7.48)]
ruditapes2_c1671	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: Ubiquitin thioesterase (EC 3.4.19.12); RNA-directed RNA polymerase (EC 2.7.7.48)]
ruditapes2_c1671	evasion by virus of host immune response	stress response	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: Ubiquitin thioesterase (EC 3.4.19.12); RNA-directed RNA polymerase (EC 2.7.7.48)]
ruditapes2_c1671	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: Ubiquitin thioesterase (EC 3.4.19.12); RNA-directed RNA polymerase (EC 2.7.7.48)]
ruditapes2_c1671	interspecies interaction between organisms	other biological processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: Ubiquitin thioesterase (EC 3.4.19.12); RNA-directed RNA polymerase (EC 2.7.7.48)]
ruditapes_c21861	ion transport	transport	P	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)
ruditapes_c21861	bicarbonate transport	transport	P	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)
ruditapes_c21861	sodium ion transport	transport	P	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)
ruditapes_c21861	chloride transport	transport	P	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)
ruditapes_c21861	regulation of pH	other biological processes	P	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)
ruditapes_c21861	transmembrane ion transport	transport	P	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)
ruditapes_c21861	anion transport	transport	P	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)
ruditapes_c21861	transport	transport	P	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)
ruditapes_c21861	transmembrane transport	transport	P	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)
ruditapes_c5134	cell wall organization	cell organization and biogenesis	P	Mannan synthase 1 (EC 2.4.1.-) (CtManS)
ruditapes_c24656	DNA repair	stress response	P	Virion host shutoff protein (Vhs) (EC 3.1.27.-)
ruditapes_c24656	DNA repair	DNA metabolism	P	Virion host shutoff protein (Vhs) (EC 3.1.27.-)
ruditapes_c16772	metabolic process	other metabolic processes	P	Mannitol-1-phosphate 5-dehydrogenase (M1PDH) (MPD) (MPDH) (EC 1.1.1.17)
ruditapes_c16772	oxidation reduction	other metabolic processes	P	Mannitol-1-phosphate 5-dehydrogenase (M1PDH) (MPD) (MPDH) (EC 1.1.1.17)
ruditapes_c12670	transport	transport	P	Potassium channel subfamily T member 2 (Sequence like an intermediate conductance potassium channel subunit) (Sodium and chloride-activated ATP-sensitive potassium channel Slo2.1)
ruditapes_c12670	potassium ion transport	transport	P	Potassium channel subfamily T member 2 (Sequence like an intermediate conductance potassium channel subunit) (Sodium and chloride-activated ATP-sensitive potassium channel Slo2.1)
ruditapes_c12670	ion transport	transport	P	Potassium channel subfamily T member 2 (Sequence like an intermediate conductance potassium channel subunit) (Sodium and chloride-activated ATP-sensitive potassium channel Slo2.1)
ruditapes_c15753	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes2_c1330	cell adhesion	cell adhesion	P	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes_c31078	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes_c24417	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes_c24417	cell adhesion	cell adhesion	P	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes_c15753	cell adhesion	cell adhesion	P	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes_c31078	cell adhesion	cell adhesion	P	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes_c2809	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes2_c1330	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes_c2809	cell adhesion	cell adhesion	P	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)
ruditapes_c27158	Malpighian tubule morphogenesis	developmental processes	P	Protein three rows
ruditapes_c27158	multicellular organismal development	developmental processes	P	Protein three rows
ruditapes_c27158	mitotic sister chromatid segregation	cell cycle and proliferation	P	Protein three rows
ruditapes_c27158	mitotic sister chromatid segregation	cell organization and biogenesis	P	Protein three rows
ruditapes_c27158	cell division	other biological processes	P	Protein three rows
ruditapes_c27158	cell cycle	cell cycle and proliferation	P	Protein three rows
ruditapes_c27158	mitosis	cell cycle and proliferation	P	Protein three rows
ruditapes_c27158	mitosis	cell organization and biogenesis	P	Protein three rows
ruditapes2_c2070	proteolysis	protein metabolism	P	Mitochondrial intermediate peptidase (MIP) (EC 3.4.24.59) (Octapeptidyl aminopeptidase)
ruditapes_c24007	response to corticosterone stimulus	other biological processes	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	nervous system development	developmental processes	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	protein amino acid phosphorylation	protein metabolism	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	response to axon injury	stress response	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	protein amino acid autophosphorylation	protein metabolism	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	modulation by virus of host transcription	RNA metabolism	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	mechanoreceptor differentiation	developmental processes	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	multicellular organismal development	developmental processes	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	cell differentiation	other biological processes	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	neuron migration	developmental processes	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	negative regulation of cell death	death	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	negative regulation of astrocyte differentiation	developmental processes	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	phosphorylation	other metabolic processes	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	response to stress	stress response	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	positive regulation of axon extension involved in regeneration	stress response	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	positive regulation of axon extension involved in regeneration	developmental processes	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	positive regulation of axon extension involved in regeneration	cell organization and biogenesis	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	response to ethanol	other biological processes	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c24007	neuron fate specification	developmental processes	P	NT-3 growth factor receptor (EC 2.7.10.1) (GP145-TrkC) (Trk-C) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase)
ruditapes_c21624	oxidation reduction	other metabolic processes	P	Vitamin D 25-hydroxylase (EC 1.14.13.159) (Cytochrome P450 2R1)
ruditapes_c21624	vitamin metabolic process	other metabolic processes	P	Vitamin D 25-hydroxylase (EC 1.14.13.159) (Cytochrome P450 2R1)
ruditapes_c21624	response to cesium	other biological processes	P	Vitamin D 25-hydroxylase (EC 1.14.13.159) (Cytochrome P450 2R1)
ruditapes_c21624	vitamin D metabolic process	other metabolic processes	P	Vitamin D 25-hydroxylase (EC 1.14.13.159) (Cytochrome P450 2R1)
ruditapes_c21624	response to ionizing radiation	other biological processes	P	Vitamin D 25-hydroxylase (EC 1.14.13.159) (Cytochrome P450 2R1)
ruditapes_c21624	response to metal ion	other biological processes	P	Vitamin D 25-hydroxylase (EC 1.14.13.159) (Cytochrome P450 2R1)
ruditapes_c21624	xenobiotic metabolic process	other metabolic processes	P	Vitamin D 25-hydroxylase (EC 1.14.13.159) (Cytochrome P450 2R1)
ruditapes_c21624	steroid metabolic process	other metabolic processes	P	Vitamin D 25-hydroxylase (EC 1.14.13.159) (Cytochrome P450 2R1)
ruditapes_c30580	"transcription, DNA-dependent"	RNA metabolism	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	negative regulation of histone H3-K36 methylation	protein metabolism	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	negative regulation of histone H3-K36 methylation	cell organization and biogenesis	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	negative regulation of histone H3-K4 methylation	protein metabolism	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	negative regulation of histone H3-K4 methylation	cell organization and biogenesis	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	negative regulation of bone mineralization	developmental processes	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	palate development	other biological processes	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	heart development	developmental processes	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	odontogenesis	developmental processes	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	specification of axis polarity	developmental processes	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	negative regulation of tooth mineralization	developmental processes	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	"regulation of transcription, DNA-dependent"	RNA metabolism	P	BCL-6 corepressor (BCoR)
ruditapes_c30580	chromatin modification	cell organization and biogenesis	P	BCL-6 corepressor (BCoR)
ruditapes_c17194	homophilic cell adhesion	cell adhesion	P	Desmoglein-4
ruditapes_c17194	cell adhesion	cell adhesion	P	Desmoglein-4
ruditapes_c24726	glycerol metabolic process	other metabolic processes	P	Glycerophosphodiester phosphodiesterase domain-containing protein 4 (EC 3.1.-.-) (Glycerophosphodiester phosphodiesterase 6) (UgpQ)
ruditapes_c24726	lipid metabolic process	other metabolic processes	P	Glycerophosphodiester phosphodiesterase domain-containing protein 4 (EC 3.1.-.-) (Glycerophosphodiester phosphodiesterase 6) (UgpQ)
ruditapes_c662	metabolic process	other metabolic processes	P	Anguibactin system regulator
ruditapes_c31567	RNA biosynthetic process	RNA metabolism	P	RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent helicase (EC 3.6.4.-) (1B) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (1C-VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (1D-PRO); RNA-directed RNA polymerase (EC 2.7.7.48) (1E-POL)]
ruditapes_c31567	proteolysis	protein metabolism	P	RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent helicase (EC 3.6.4.-) (1B) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (1C-VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (1D-PRO); RNA-directed RNA polymerase (EC 2.7.7.48) (1E-POL)]
ruditapes_c31567	viral genome replication	other biological processes	P	RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent helicase (EC 3.6.4.-) (1B) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (1C-VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (1D-PRO); RNA-directed RNA polymerase (EC 2.7.7.48) (1E-POL)]
ruditapes_c31567	RNA-protein covalent cross-linking	protein metabolism	P	RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent helicase (EC 3.6.4.-) (1B) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (1C-VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (1D-PRO); RNA-directed RNA polymerase (EC 2.7.7.48) (1E-POL)]
ruditapes_c31567	"transcription, DNA-dependent"	RNA metabolism	P	RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent helicase (EC 3.6.4.-) (1B) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (1C-VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (1D-PRO); RNA-directed RNA polymerase (EC 2.7.7.48) (1E-POL)]
ruditapes2_c883	terpene metabolic process	other metabolic processes	P	(-)-isopiperitenone reductase (EC 1.3.1.82)
ruditapes2_c883	metabolic process	other metabolic processes	P	(-)-isopiperitenone reductase (EC 1.3.1.82)
ruditapes2_c883	oxidation reduction	other metabolic processes	P	(-)-isopiperitenone reductase (EC 1.3.1.82)
ruditapes2_c883	menthol biosynthetic process	other metabolic processes	P	(-)-isopiperitenone reductase (EC 1.3.1.82)
ruditapes_c12204	cell communication	other biological processes	P	Gap junction beta-1 protein (Connexin-32) (Cx32)
ruditapes_c23582	proteolysis	protein metabolism	P	Extracellular metalloproteinase 2 (EC 3.4.24.-) (Fungalysin MEP2)
ruditapes_c23582	pathogenesis	other biological processes	P	Extracellular metalloproteinase 2 (EC 3.4.24.-) (Fungalysin MEP2)
ruditapes_c11071	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c11071	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c11071	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c11071	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c11071	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c11071	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c11071	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c11071	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c19573	oligosaccharide biosynthetic process	other metabolic processes	P	Polypeptide N-acetylgalactosaminyltransferase 5 (pp-GaNTase 5) (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 5) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 5)
ruditapes_c33910	nucleosome assembly	cell organization and biogenesis	P	Histone H2A
ruditapes_c13309	metabolic process	other metabolic processes	P	Crocetin glucosyltransferase 2 (EC 2.4.1.271)
ruditapes_c23524	alkaloid metabolic process	other metabolic processes	P	Tryptophan dimethylallyltransferase (EC 2.5.1.34) (4-dimethylallyltryptophan synthase) (All-trans-hexaprenyl-diphosphate synthase) (L-tryptophan dimethylallyl transferase) (DMATS)
ruditapes_c19139	in utero embryonic development	developmental processes	P	Insulin-like 3 (Leydig insulin-like peptide) (Ley-I-L) (Relaxin-like factor) [Cleaved into: Insulin-like 3 B chain; Insulin-like 3 A chain]
ruditapes_c19139	male gonad development	developmental processes	P	Insulin-like 3 (Leydig insulin-like peptide) (Ley-I-L) (Relaxin-like factor) [Cleaved into: Insulin-like 3 B chain; Insulin-like 3 A chain]
ruditapes_c23897	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c23897	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c23897	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c22955	signal transduction	signal transduction	P	Probable inactive serine/threonine-protein kinase roco10 (Ras of complex proteins and C-terminal of roc 10)
ruditapes_c22955	positive regulation of GTPase activity	other biological processes	P	Probable inactive serine/threonine-protein kinase roco10 (Ras of complex proteins and C-terminal of roc 10)
ruditapes_c22955	protein amino acid phosphorylation	protein metabolism	P	Probable inactive serine/threonine-protein kinase roco10 (Ras of complex proteins and C-terminal of roc 10)
ruditapes_c28329	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase roco4 (EC 2.7.11.1) (Ras of complex proteins and C-terminal of roc 4)
ruditapes_c28329	small GTPase mediated signal transduction	signal transduction	P	Probable serine/threonine-protein kinase roco4 (EC 2.7.11.1) (Ras of complex proteins and C-terminal of roc 4)
ruditapes_c28329	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase roco4 (EC 2.7.11.1) (Ras of complex proteins and C-terminal of roc 4)
ruditapes_lrc11451	translation	protein metabolism	P	40S ribosomal protein S15a
ruditapes_lrc33484	translation	protein metabolism	P	40S ribosomal protein S15a
ruditapes2_c203	translation	protein metabolism	P	40S ribosomal protein S15a
ruditapes_c28650	chemotaxis	other biological processes	P	Prostaglandin D2 receptor 2 (G protein-coupled receptor 44)
ruditapes_c28650	signal transduction	signal transduction	P	Prostaglandin D2 receptor 2 (G protein-coupled receptor 44)
ruditapes_c28650	G-protein coupled receptor protein signaling pathway	signal transduction	P	Prostaglandin D2 receptor 2 (G protein-coupled receptor 44)
ruditapes_c28650	calcium-mediated signaling	signal transduction	P	Prostaglandin D2 receptor 2 (G protein-coupled receptor 44)
ruditapes_c25524	pathogenesis	other biological processes	P	Potassium channel toxin alpha-KTx 6.8 (OcKTx3)
ruditapes_c13257	pathogenesis	other biological processes	P	Potassium channel toxin alpha-KTx 6.8 (OcKTx3)
ruditapes_c5583	viral genome replication	other biological processes	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c5583	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)
ruditapes_c18051	phosphorylation	other metabolic processes	P	Dual serine/threonine and tyrosine protein kinase (EC 2.7.12.1) (Dusty protein kinase) (Dusty PK) (Receptor-interacting serine/threonine-protein kinase 5)
ruditapes_c18051	protein amino acid phosphorylation	protein metabolism	P	Dual serine/threonine and tyrosine protein kinase (EC 2.7.12.1) (Dusty protein kinase) (Dusty PK) (Receptor-interacting serine/threonine-protein kinase 5)
ruditapes_c26306	metabolic process	other metabolic processes	P	Neuraminidase (EC 3.2.1.18)
ruditapes_c26306	carbohydrate metabolic process	other metabolic processes	P	Neuraminidase (EC 3.2.1.18)
ruditapes2_c2883	cell redox homeostasis	other biological processes	P	"Monothiol glutaredoxin-5, mitochondrial"
ruditapes2_c816	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_c4056	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes2_c816	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_lrc35043	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_c4056	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_c11133	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_lrc32698	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes2_c863	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_c21118	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_lrc36405	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_lrc36405	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_s38198	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_lrc32698	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes2_c863	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_lrc35043	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_s38198	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_c21118	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_c25979	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_c11133	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_c25979	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)
ruditapes_c13206	signal transduction	signal transduction	P	Protein E(sev)2B (Downstream of receptor kinase) (Protein enhancer of sevenless 2B) (SH2-SH3 adapter protein drk)
ruditapes_lrc7282	methylation	other metabolic processes	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_lrc7282	tRNA processing	RNA metabolism	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_c19252	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c19252	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c19252	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c19252	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes2_c2607	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_lrc33740	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_lrc33740	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_lrc33740	RNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_lrc33740	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c19123	potassium ion transport	transport	P	Probable potassium transporter 4 (OsHAK4)
ruditapes_c19123	transport	transport	P	Probable potassium transporter 4 (OsHAK4)
ruditapes_c19123	ion transport	transport	P	Probable potassium transporter 4 (OsHAK4)
ruditapes_c16363	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase 6 (EC 3.2.1.4) (Endo-1,4-beta glucanase 6) (OsCel9E)"
ruditapes_c16363	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase 6 (EC 3.2.1.4) (Endo-1,4-beta glucanase 6) (OsCel9E)"
ruditapes_c16363	cell wall organization	cell organization and biogenesis	P	"Endoglucanase 6 (EC 3.2.1.4) (Endo-1,4-beta glucanase 6) (OsCel9E)"
ruditapes_c16363	metabolic process	other metabolic processes	P	"Endoglucanase 6 (EC 3.2.1.4) (Endo-1,4-beta glucanase 6) (OsCel9E)"
ruditapes_c16363	cell wall modification during multidimensional cell growth	cell organization and biogenesis	P	"Endoglucanase 6 (EC 3.2.1.4) (Endo-1,4-beta glucanase 6) (OsCel9E)"
ruditapes_c16363	cellulose catabolic process	other metabolic processes	P	"Endoglucanase 6 (EC 3.2.1.4) (Endo-1,4-beta glucanase 6) (OsCel9E)"
ruditapes_c25863	RNA splicing	RNA metabolism	P	"CRS2-associated factor 1, mitochondrial"
ruditapes_c25863	mRNA processing	RNA metabolism	P	"CRS2-associated factor 1, mitochondrial"
ruditapes_c25612	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	Cyclin-T1-2 (CycT1;2)
ruditapes_c25612	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclin-T1-2 (CycT1;2)
ruditapes_c25612	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	Cyclin-T1-2 (CycT1;2)
ruditapes_lrc37373	filopodium assembly	cell organization and biogenesis	P	Rho GTPase-activating protein 42 (Rho GTPase-activating protein 10-like) (Rho-type GTPase-activating protein 42)
ruditapes_lrc37373	positive regulation of GTPase activity	other biological processes	P	Rho GTPase-activating protein 42 (Rho GTPase-activating protein 10-like) (Rho-type GTPase-activating protein 42)
ruditapes_lrc37373	signal transduction	signal transduction	P	Rho GTPase-activating protein 42 (Rho GTPase-activating protein 10-like) (Rho-type GTPase-activating protein 42)
ruditapes_c13183	cell differentiation	other biological processes	P	Gliomedin
ruditapes_c13183	multicellular organismal development	developmental processes	P	Gliomedin
ruditapes_c13183	nervous system development	developmental processes	P	Gliomedin
ruditapes_c15835	protein ubiquitination	protein metabolism	P	PDZ domain-containing RING finger protein 4 (Ligand of Numb protein X 4) (SEMACAP3-like protein)
ruditapes_lrc24628	negative regulation of endopeptidase activity	other biological processes	P	Putative protein C3P1
ruditapes_c17408	axon guidance	developmental processes	P	Netrin receptor UNC5A (Protein unc-5 homolog 1) (Protein unc-5 homolog A)
ruditapes_c17408	axon guidance	cell organization and biogenesis	P	Netrin receptor UNC5A (Protein unc-5 homolog 1) (Protein unc-5 homolog A)
ruditapes_c17408	signal transduction	signal transduction	P	Netrin receptor UNC5A (Protein unc-5 homolog 1) (Protein unc-5 homolog A)
ruditapes_c17408	apoptosis	death	P	Netrin receptor UNC5A (Protein unc-5 homolog 1) (Protein unc-5 homolog A)
ruditapes_c17408	regulation of apoptosis	death	P	Netrin receptor UNC5A (Protein unc-5 homolog 1) (Protein unc-5 homolog A)
ruditapes_c17408	multicellular organismal development	developmental processes	P	Netrin receptor UNC5A (Protein unc-5 homolog 1) (Protein unc-5 homolog A)
ruditapes_c29843	transport	transport	P	Ferric-chelate reductase 1 (EC 1.-.-.-) (Stromal cell-derived receptor 2) (SDR-2)
ruditapes_c29843	electron transport chain	other metabolic processes	P	Ferric-chelate reductase 1 (EC 1.-.-.-) (Stromal cell-derived receptor 2) (SDR-2)
ruditapes_c29843	oxidation reduction	other metabolic processes	P	Ferric-chelate reductase 1 (EC 1.-.-.-) (Stromal cell-derived receptor 2) (SDR-2)
ruditapes_c23479	cytoskeleton organization	cell organization and biogenesis	P	Formin-like protein 3
ruditapes_c23479	cellular component organization	cell organization and biogenesis	P	Formin-like protein 3
ruditapes_c23479	cell migration	other biological processes	P	Formin-like protein 3
ruditapes_c23479	regulation of cell shape	cell organization and biogenesis	P	Formin-like protein 3
ruditapes_c23479	actin cytoskeleton organization	cell organization and biogenesis	P	Formin-like protein 3
ruditapes_c21119	chromatin modification	cell organization and biogenesis	P	PHD finger protein 21A (BHC80a) (BRAF35-HDAC complex protein BHC80) (mBHC80)
ruditapes_c21119	"transcription, DNA-dependent"	RNA metabolism	P	PHD finger protein 21A (BHC80a) (BRAF35-HDAC complex protein BHC80) (mBHC80)
ruditapes_c21119	suckling behavior	other biological processes	P	PHD finger protein 21A (BHC80a) (BRAF35-HDAC complex protein BHC80) (mBHC80)
ruditapes_c21119	"regulation of transcription, DNA-dependent"	RNA metabolism	P	PHD finger protein 21A (BHC80a) (BRAF35-HDAC complex protein BHC80) (mBHC80)
ruditapes_c30682	release of sequestered calcium ion into cytosol	transport	P	Inhibitor of Bruton tyrosine kinase (IBtk)
ruditapes_c30682	negative regulation of protein amino acid phosphorylation	protein metabolism	P	Inhibitor of Bruton tyrosine kinase (IBtk)
ruditapes_c1049	mitosis	cell cycle and proliferation	P	Kelch-like protein 9
ruditapes_c1049	mitosis	cell organization and biogenesis	P	Kelch-like protein 9
ruditapes_c1049	cytokinesis	other biological processes	P	Kelch-like protein 9
ruditapes_c1049	cell cycle	cell cycle and proliferation	P	Kelch-like protein 9
ruditapes_c1049	cell division	other biological processes	P	Kelch-like protein 9
ruditapes_c1049	protein ubiquitination	protein metabolism	P	Kelch-like protein 9
ruditapes_c7622	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 34 (EC 3.4.19.12) (Deubiquitinating enzyme 34) (Ubiquitin thioesterase 34) (Ubiquitin-specific-processing protease 34)
ruditapes_c7622	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 34 (EC 3.4.19.12) (Deubiquitinating enzyme 34) (Ubiquitin thioesterase 34) (Ubiquitin-specific-processing protease 34)
ruditapes_c7622	Wnt receptor signaling pathway	signal transduction	P	Ubiquitin carboxyl-terminal hydrolase 34 (EC 3.4.19.12) (Deubiquitinating enzyme 34) (Ubiquitin thioesterase 34) (Ubiquitin-specific-processing protease 34)
ruditapes_c29845	platelet formation	developmental processes	P	Neurobeachin-like protein 2
ruditapes_c21800	chromosome condensation	cell organization and biogenesis	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3)
ruditapes_c21800	mitosis	cell cycle and proliferation	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3)
ruditapes_c21800	mitosis	cell organization and biogenesis	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3)
ruditapes_c21800	cell division	other biological processes	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3)
ruditapes_c21800	cell cycle	cell cycle and proliferation	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3)
ruditapes_c21800	mitotic chromosome condensation	cell cycle and proliferation	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3)
ruditapes_c21800	mitotic chromosome condensation	cell organization and biogenesis	P	Condensin-2 complex subunit D3 (Non-SMC condensin II complex subunit D3)
ruditapes_lrc34480	L-arabinose metabolic process	other metabolic processes	P	Otogelin
ruditapes_c11453	regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 9 (TBC1 domain family member 9A)
ruditapes_c11453	positive regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 9 (TBC1 domain family member 9A)
ruditapes_c11453	positive regulation of GTPase activity	other biological processes	P	TBC1 domain family member 9 (TBC1 domain family member 9A)
ruditapes_c15758	olfactory behavior	other biological processes	P	E3 ubiquitin-protein ligase UBR3 (EC 6.3.2.-) (N-recognin-3) (Ubiquitin-protein ligase E3-alpha-3) (Ubiquitin-protein ligase E3-alpha-III) (Zinc finger protein 650)
ruditapes_c15758	embryonic development	developmental processes	P	E3 ubiquitin-protein ligase UBR3 (EC 6.3.2.-) (N-recognin-3) (Ubiquitin-protein ligase E3-alpha-3) (Ubiquitin-protein ligase E3-alpha-III) (Zinc finger protein 650)
ruditapes_c15758	sensory perception of smell	other biological processes	P	E3 ubiquitin-protein ligase UBR3 (EC 6.3.2.-) (N-recognin-3) (Ubiquitin-protein ligase E3-alpha-3) (Ubiquitin-protein ligase E3-alpha-III) (Zinc finger protein 650)
ruditapes_c15758	ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase UBR3 (EC 6.3.2.-) (N-recognin-3) (Ubiquitin-protein ligase E3-alpha-3) (Ubiquitin-protein ligase E3-alpha-III) (Zinc finger protein 650)
ruditapes_c15758	suckling behavior	other biological processes	P	E3 ubiquitin-protein ligase UBR3 (EC 6.3.2.-) (N-recognin-3) (Ubiquitin-protein ligase E3-alpha-3) (Ubiquitin-protein ligase E3-alpha-III) (Zinc finger protein 650)
ruditapes_c15758	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase UBR3 (EC 6.3.2.-) (N-recognin-3) (Ubiquitin-protein ligase E3-alpha-3) (Ubiquitin-protein ligase E3-alpha-III) (Zinc finger protein 650)
ruditapes_c15758	in utero embryonic development	developmental processes	P	E3 ubiquitin-protein ligase UBR3 (EC 6.3.2.-) (N-recognin-3) (Ubiquitin-protein ligase E3-alpha-3) (Ubiquitin-protein ligase E3-alpha-III) (Zinc finger protein 650)
ruditapes_c31320	metabolic process	other metabolic processes	P	LanC-like protein 3
ruditapes_c15808	cell adhesion	cell adhesion	P	SCO-spondin
ruditapes_c6615	positive regulation of defense response	stress response	P	Protein LOL5 (OsLOL2) (Protein LSD ONE LIKE 5) (OsLOL5) (Putative zinc finger LOL5)
ruditapes_c6615	positive regulation of growth	other biological processes	P	Protein LOL5 (OsLOL2) (Protein LSD ONE LIKE 5) (OsLOL5) (Putative zinc finger LOL5)
ruditapes_c6615	defense response	stress response	P	Protein LOL5 (OsLOL2) (Protein LSD ONE LIKE 5) (OsLOL5) (Putative zinc finger LOL5)
ruditapes_s36226	positive regulation of gastric acid secretion	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	transport	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	behavioral response to pain	stress response	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	thermoception	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	temperature homeostasis	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	elevation of cytosolic calcium ion concentration	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	response to pH	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	catagen	developmental processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	response to pain	stress response	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	response to heat	stress response	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	diet induced thermogenesis	other metabolic processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	response to peptide hormone stimulus	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	fever	stress response	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	positive regulation of apoptosis	death	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	sensory perception of mechanical stimulus	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	ion transport	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	peptide secretion	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	sensory perception of pain	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	detection of chemical stimulus involved in sensory perception of pain	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	response to chemical stimulus	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	transmembrane calcium ion transport	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	microglial cell activation	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	lipid metabolic process	other metabolic processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	smooth muscle contraction involved in micturition	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	glutamate secretion	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	glutamate secretion	cell-cell signaling	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	calcium ion transport	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	cation transport	transport	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_s36226	urinary bladder smooth muscle contraction	other biological processes	P	Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1)
ruditapes_c14516	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 45 (EC 3.4.19.12) (Deubiquitinating enzyme 45) (Ubiquitin thioesterase 45) (Ubiquitin-specific-processing protease 45)
ruditapes_c14516	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 45 (EC 3.4.19.12) (Deubiquitinating enzyme 45) (Ubiquitin thioesterase 45) (Ubiquitin-specific-processing protease 45)
ruditapes_c23010	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription B (Dd-STATb) (STAT5 homolog B)
ruditapes_c23010	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription B (Dd-STATb) (STAT5 homolog B)
ruditapes_c23010	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription B (Dd-STATb) (STAT5 homolog B)
ruditapes_c23010	regulation of cell proliferation	cell cycle and proliferation	P	Signal transducer and activator of transcription B (Dd-STATb) (STAT5 homolog B)
ruditapes_c23010	signal transduction	signal transduction	P	Signal transducer and activator of transcription B (Dd-STATb) (STAT5 homolog B)
ruditapes_c23010	"transcription, DNA-dependent"	RNA metabolism	P	Signal transducer and activator of transcription B (Dd-STATb) (STAT5 homolog B)
ruditapes_c27919	metabolic process	other metabolic processes	P	Glucosylceramidase (EC 3.2.1.45) (Acid beta-glucosidase) (Beta-glucocerebrosidase) (D-glucosyl-N-acylsphingosine glucohydrolase)
ruditapes_c27919	lysosome organization	cell organization and biogenesis	P	Glucosylceramidase (EC 3.2.1.45) (Acid beta-glucosidase) (Beta-glucocerebrosidase) (D-glucosyl-N-acylsphingosine glucohydrolase)
ruditapes_c17829	lipid metabolic process	other metabolic processes	P	Glucosylceramidase (EC 3.2.1.45) (Acid beta-glucosidase) (Beta-glucocerebrosidase) (D-glucosyl-N-acylsphingosine glucohydrolase)
ruditapes_c27919	sphingolipid metabolic process	other metabolic processes	P	Glucosylceramidase (EC 3.2.1.45) (Acid beta-glucosidase) (Beta-glucocerebrosidase) (D-glucosyl-N-acylsphingosine glucohydrolase)
ruditapes_c17829	metabolic process	other metabolic processes	P	Glucosylceramidase (EC 3.2.1.45) (Acid beta-glucosidase) (Beta-glucocerebrosidase) (D-glucosyl-N-acylsphingosine glucohydrolase)
ruditapes_c17829	lysosome organization	cell organization and biogenesis	P	Glucosylceramidase (EC 3.2.1.45) (Acid beta-glucosidase) (Beta-glucocerebrosidase) (D-glucosyl-N-acylsphingosine glucohydrolase)
ruditapes_c27919	carbohydrate metabolic process	other metabolic processes	P	Glucosylceramidase (EC 3.2.1.45) (Acid beta-glucosidase) (Beta-glucocerebrosidase) (D-glucosyl-N-acylsphingosine glucohydrolase)
ruditapes_c17829	carbohydrate metabolic process	other metabolic processes	P	Glucosylceramidase (EC 3.2.1.45) (Acid beta-glucosidase) (Beta-glucocerebrosidase) (D-glucosyl-N-acylsphingosine glucohydrolase)
ruditapes_c17829	sphingolipid metabolic process	other metabolic processes	P	Glucosylceramidase (EC 3.2.1.45) (Acid beta-glucosidase) (Beta-glucocerebrosidase) (D-glucosyl-N-acylsphingosine glucohydrolase)
ruditapes_c27919	lipid metabolic process	other metabolic processes	P	Glucosylceramidase (EC 3.2.1.45) (Acid beta-glucosidase) (Beta-glucocerebrosidase) (D-glucosyl-N-acylsphingosine glucohydrolase)
ruditapes_c7098	metabolic process	other metabolic processes	P	Linear gramicidin synthase subunit C [Includes: ATP-dependent valine adenylase (ValA) (Valine activase); ATP-dependent D-valine adenylase (D-ValA) (D-valine activase); Valine racemase [ATP-hydrolyzing] (EC 5.1.1.-); ATP-dependent tryptophan adenylase (TrpA) (Tryptophan activase); ATP-dependent tryptophan/phenylalanine/tyrosine adenylase (Trp/Phe/TyrA) (Tryptophan/phenylalanine/tyrosine activase)]
ruditapes_c7098	antibiotic biosynthetic process	other metabolic processes	P	Linear gramicidin synthase subunit C [Includes: ATP-dependent valine adenylase (ValA) (Valine activase); ATP-dependent D-valine adenylase (D-ValA) (D-valine activase); Valine racemase [ATP-hydrolyzing] (EC 5.1.1.-); ATP-dependent tryptophan adenylase (TrpA) (Tryptophan activase); ATP-dependent tryptophan/phenylalanine/tyrosine adenylase (Trp/Phe/TyrA) (Tryptophan/phenylalanine/tyrosine activase)]
ruditapes_c27690	peptidoglycan catabolic process	other metabolic processes	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes_c36958	innate immune response	stress response	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes2_c3303	innate immune response	stress response	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes_c30880	innate immune response	stress response	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes_c30880	peptidoglycan catabolic process	other metabolic processes	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes2_c3303	peptidoglycan catabolic process	other metabolic processes	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes_c1376	innate immune response	stress response	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes2_c880	innate immune response	stress response	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes_c4298	innate immune response	stress response	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes_c36958	peptidoglycan catabolic process	other metabolic processes	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes_c1376	peptidoglycan catabolic process	other metabolic processes	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes2_c880	peptidoglycan catabolic process	other metabolic processes	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes_c27690	innate immune response	stress response	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes_c4298	peptidoglycan catabolic process	other metabolic processes	P	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)
ruditapes_c10653	metabolic process	other metabolic processes	P	Alcohol dehydrogenase 1 (EC 1.1.1.1)
ruditapes_c10653	oxidation reduction	other metabolic processes	P	Alcohol dehydrogenase 1 (EC 1.1.1.1)
ruditapes_c8842	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor family C group 6 member A
ruditapes_c8842	calcium-mediated signaling	signal transduction	P	G-protein coupled receptor family C group 6 member A
ruditapes_c8842	response to amino acid stimulus	other biological processes	P	G-protein coupled receptor family C group 6 member A
ruditapes_c8842	signal transduction	signal transduction	P	G-protein coupled receptor family C group 6 member A
ruditapes_c27471	ossification	developmental processes	P	SUN domain-containing ossification factor (Membrane protein CH1) (Protein osteopotentia homolog) (SUN-like protein 1)
ruditapes_c27471	multicellular organismal development	developmental processes	P	SUN domain-containing ossification factor (Membrane protein CH1) (Protein osteopotentia homolog) (SUN-like protein 1)
ruditapes_c3957	translational elongation	protein metabolism	P	Elongation factor 1-delta (EF-1-delta)
ruditapes_c3957	translation	protein metabolism	P	Elongation factor 1-delta (EF-1-delta)
ruditapes_c19639	cytolysis	death	P	Monocyte to macrophage differentiation factor (Macrophage/microglia activation-associated factor) (MAF) (Progestin and adipoQ receptor family member XI)
ruditapes_c20850	positive regulation of GTPase activity	other biological processes	P	Rho GTPase-activating protein 21-B (Rho-type GTPase-activating protein 21-B) (XrGAP)
ruditapes_c20850	signal transduction	signal transduction	P	Rho GTPase-activating protein 21-B (Rho-type GTPase-activating protein 21-B) (XrGAP)
ruditapes2_c2244	oxidation reduction	other metabolic processes	P	Dehydrogenase/reductase SDR family member 11 (EC 1.-.-.-)
ruditapes2_c2244	metabolic process	other metabolic processes	P	Dehydrogenase/reductase SDR family member 11 (EC 1.-.-.-)
ruditapes2_c3733	transport	transport	P	Lysosomal-associated transmembrane protein 4B
ruditapes_lrc33883	translation	protein metabolism	P	40S ribosomal protein S27
ruditapes_lrc33883	biological_process	other biological processes	P	40S ribosomal protein S27
ruditapes2_c1926	ubiquitin-dependent protein catabolic process	protein metabolism	P	S-phase kinase-associated protein 1 (Cyclin-A/CDK2-associated protein p19) (S-phase kinase-associated protein 1A) (p19A) (p19skp1)
ruditapes_lrc38312	rhamnose metabolic process	other metabolic processes	P	L-rhamnose isomerase (EC 5.3.1.14)
ruditapes_c14804	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c14804	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes2_c4011	metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_c4011	tryptophan metabolic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_c4011	tryptophan biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_c4011	aromatic amino acid family biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes2_c4011	cellular amino acid biosynthetic process	other metabolic processes	P	Tryptophan synthase alpha chain (EC 4.2.1.20)
ruditapes_c13039	porphyrin biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c13039	heme biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c12552	RNA processing	RNA metabolism	P	Uncharacterized RNA methyltransferase LIC
ruditapes_c12552	RNA methylation	RNA metabolism	P	Uncharacterized RNA methyltransferase LIC
ruditapes_c12552	methylation	other metabolic processes	P	Uncharacterized RNA methyltransferase LIC
ruditapes2_c1461	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes2_c1461	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes2_c1461	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c17772	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c17772	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c20294	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c20294	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c20294	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c17772	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c31496	purine nucleotide biosynthetic process	other metabolic processes	P	Adenylosuccinate synthetase (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)
ruditapes_c17035	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c17035	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c17035	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c17035	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c17035	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c11249	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2 (BPG-dependent PGAM 2) (PGAM 2) (Phosphoglyceromutase 2) (dPGM 2) (EC 5.4.2.1)"
ruditapes_c11249	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2 (BPG-dependent PGAM 2) (PGAM 2) (Phosphoglyceromutase 2) (dPGM 2) (EC 5.4.2.1)"
ruditapes_lrc21227	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein Vpr (R ORF protein) (Viral protein R)
ruditapes_lrc21227	"transcription, DNA-dependent"	RNA metabolism	P	Protein Vpr (R ORF protein) (Viral protein R)
ruditapes_lrc21227	ion transport	transport	P	Protein Vpr (R ORF protein) (Viral protein R)
ruditapes_lrc21227	transport	transport	P	Protein Vpr (R ORF protein) (Viral protein R)
ruditapes_lrc21227	cell cycle	cell cycle and proliferation	P	Protein Vpr (R ORF protein) (Viral protein R)
ruditapes_lrc21227	apoptosis	death	P	Protein Vpr (R ORF protein) (Viral protein R)
ruditapes_lrc21227	viral infectious cycle	other biological processes	P	Protein Vpr (R ORF protein) (Viral protein R)
ruditapes_lrc21227	interspecies interaction between organisms	other biological processes	P	Protein Vpr (R ORF protein) (Viral protein R)
ruditapes_c8693	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c8693	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c8693	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c8693	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c8693	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c1887	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes2_c1887	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes2_c1887	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c27833	protein amino acid deacetylation	protein metabolism	P	NAD-dependent protein deacylase (EC 3.5.1.-) (Regulatory protein SIR2 homolog)
ruditapes_c29595	DNA recombination	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c29595	DNA repair	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c29595	DNA repair	DNA metabolism	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c29595	response to DNA damage stimulus	stress response	P	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) (Holliday junction nuclease RuvC) (Holliday junction resolvase RuvC)
ruditapes_c25366	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c25366	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c25366	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c5211	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c5211	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c5211	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c5211	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c5211	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c25366	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c25366	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c26758	lipid biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c26758	lipid A biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c26827	carbohydrate metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c26827	glutamine metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c26827	carbohydrate biosynthetic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c25418	protein folding	protein metabolism	P	Protein GrpE (HSP-70 cofactor)
ruditapes_c25418	response to stress	stress response	P	Protein GrpE (HSP-70 cofactor)
ruditapes_c13132	methylation	other metabolic processes	P	Uncharacterized RNA methyltransferase LJ
ruditapes_c13132	RNA processing	RNA metabolism	P	Uncharacterized RNA methyltransferase LJ
ruditapes_c13132	RNA methylation	RNA metabolism	P	Uncharacterized RNA methyltransferase LJ
ruditapes_c21640	translation	protein metabolism	P	30S ribosomal protein S7
ruditapes_c30070	DNA replication	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c30070	metabolic process	other metabolic processes	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c30070	DNA catabolic process	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes2_c1200	peroxisome organization	cell organization and biogenesis	P	Peroxisomal biogenesis factor 6 (Peroxin-6)
ruditapes_c13438	transcription termination	RNA metabolism	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c13438	transcription termination	cell organization and biogenesis	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c13438	"transcription, DNA-dependent"	RNA metabolism	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c13438	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c13438	rRNA processing	RNA metabolism	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c13438	"regulation of transcription, DNA-dependent"	RNA metabolism	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes_c13438	mRNA processing	RNA metabolism	P	5'-3' exoribonuclease 2 (EC 3.1.13.-)
ruditapes2_c2289	cell cycle	cell cycle and proliferation	P	Protein BUR2
ruditapes2_c2289	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein BUR2
ruditapes2_c2289	"transcription, DNA-dependent"	RNA metabolism	P	Protein BUR2
ruditapes_c10786	cell wall organization	cell organization and biogenesis	P	GPI ethanolamine phosphate transferase 3 (EC 2.-.-.-) (Glycosylphosphatidylinositol-anchor biosynthesis protein 13)
ruditapes_c10786	metabolic process	other metabolic processes	P	GPI ethanolamine phosphate transferase 3 (EC 2.-.-.-) (Glycosylphosphatidylinositol-anchor biosynthesis protein 13)
ruditapes_c10786	GPI anchor biosynthetic process	protein metabolism	P	GPI ethanolamine phosphate transferase 3 (EC 2.-.-.-) (Glycosylphosphatidylinositol-anchor biosynthesis protein 13)
ruditapes_c26886	"transcription, DNA-dependent"	RNA metabolism	P	Glucose transport transcription regulator RGT1 (Restores glucose transport protein 1)
ruditapes_c26886	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Glucose transport transcription regulator RGT1 (Restores glucose transport protein 1)
ruditapes_c11920	cell cycle	cell cycle and proliferation	P	Sister chromatid cohesion protein 2
ruditapes_c1944	negative regulation of catalytic activity	other biological processes	P	Ornithine decarboxylase antizyme
ruditapes_c7383	conjugation	other biological processes	P	Plasma membrane fusion protein PRM1
ruditapes_c19174	DNA repair	stress response	P	Topoisomerase 1-associated factor 1
ruditapes_c19174	DNA repair	DNA metabolism	P	Topoisomerase 1-associated factor 1
ruditapes_c19174	response to DNA damage stimulus	stress response	P	Topoisomerase 1-associated factor 1
ruditapes_c19174	negative regulation of DNA replication	DNA metabolism	P	Topoisomerase 1-associated factor 1
ruditapes_c19174	cell cycle	cell cycle and proliferation	P	Topoisomerase 1-associated factor 1
ruditapes_c19174	meiosis	cell cycle and proliferation	P	Topoisomerase 1-associated factor 1
ruditapes2_c2551	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor RSE1
ruditapes2_c2551	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor RSE1
ruditapes2_c2551	cell cycle	cell cycle and proliferation	P	Pre-mRNA-splicing factor RSE1
ruditapes_lrc10748	lipid biosynthetic process	other metabolic processes	P	"C-5 sterol desaturase (EC 1.3.3.-) (Ergosterol Delta(5,6) desaturase) (Sterol-C5-desaturase)"
ruditapes_lrc10748	steroid biosynthetic process	other metabolic processes	P	"C-5 sterol desaturase (EC 1.3.3.-) (Ergosterol Delta(5,6) desaturase) (Sterol-C5-desaturase)"
ruditapes_lrc10748	oxidation reduction	other metabolic processes	P	"C-5 sterol desaturase (EC 1.3.3.-) (Ergosterol Delta(5,6) desaturase) (Sterol-C5-desaturase)"
ruditapes_lrc10748	fatty acid biosynthetic process	other metabolic processes	P	"C-5 sterol desaturase (EC 1.3.3.-) (Ergosterol Delta(5,6) desaturase) (Sterol-C5-desaturase)"
ruditapes_lrc10748	sterol biosynthetic process	other metabolic processes	P	"C-5 sterol desaturase (EC 1.3.3.-) (Ergosterol Delta(5,6) desaturase) (Sterol-C5-desaturase)"
ruditapes_c14379	proteolysis	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-)"
ruditapes_c3851	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription activator of gluconeogenesis ERT1
ruditapes_c3851	signal transduction	signal transduction	P	Transcription activator of gluconeogenesis ERT1
ruditapes_c3851	gluconeogenesis	other metabolic processes	P	Transcription activator of gluconeogenesis ERT1
ruditapes_c3851	"transcription, DNA-dependent"	RNA metabolism	P	Transcription activator of gluconeogenesis ERT1
ruditapes2_c2119	ubiquitin-dependent protein catabolic process	protein metabolism	P	PAB-dependent poly(A)-specific ribonuclease subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease)
ruditapes2_c2119	mRNA processing	RNA metabolism	P	PAB-dependent poly(A)-specific ribonuclease subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease)
ruditapes_lrc24155	mRNA processing	RNA metabolism	P	PAB-dependent poly(A)-specific ribonuclease subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease)
ruditapes_lrc24155	ubiquitin-dependent protein catabolic process	protein metabolism	P	PAB-dependent poly(A)-specific ribonuclease subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease)
ruditapes_c4630	mRNA processing	RNA metabolism	P	PAB-dependent poly(A)-specific ribonuclease subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease)
ruditapes_c4630	ubiquitin-dependent protein catabolic process	protein metabolism	P	PAB-dependent poly(A)-specific ribonuclease subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease)
ruditapes_c20380	DNA repair	stress response	P	DNA damage checkpoint protein 1
ruditapes_c20380	DNA repair	DNA metabolism	P	DNA damage checkpoint protein 1
ruditapes_c21752	response to DNA damage stimulus	stress response	P	DNA damage checkpoint protein 1
ruditapes_c20380	response to DNA damage stimulus	stress response	P	DNA damage checkpoint protein 1
ruditapes_c21752	DNA repair	stress response	P	DNA damage checkpoint protein 1
ruditapes_c21752	DNA repair	DNA metabolism	P	DNA damage checkpoint protein 1
ruditapes_c15470	intracellular protein transport	transport	P	AP-3 complex subunit delta (Adapter-related protein complex 3 subunit delta) (Delta-adaptin 3) (Delta-adaptin)
ruditapes_c15470	protein transport	transport	P	AP-3 complex subunit delta (Adapter-related protein complex 3 subunit delta) (Delta-adaptin 3) (Delta-adaptin)
ruditapes_c15470	vesicle-mediated transport	transport	P	AP-3 complex subunit delta (Adapter-related protein complex 3 subunit delta) (Delta-adaptin 3) (Delta-adaptin)
ruditapes_c15470	transport	transport	P	AP-3 complex subunit delta (Adapter-related protein complex 3 subunit delta) (Delta-adaptin 3) (Delta-adaptin)
ruditapes_c14032	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_c28607	mRNA processing	RNA metabolism	P	mRNA-capping enzyme subunit alpha (GTP--RNA guanylyltransferase) (GTase) (mRNA guanylyltransferase) (EC 2.7.7.50)
ruditapes_c28607	mRNA capping	RNA metabolism	P	mRNA-capping enzyme subunit alpha (GTP--RNA guanylyltransferase) (GTase) (mRNA guanylyltransferase) (EC 2.7.7.50)
ruditapes_c25247	transport	transport	P	Autophagy-related protein 8 (Autophagy-related ubiquitin-like modifier ATG8)
ruditapes_lrc11082	autophagy	other metabolic processes	P	Autophagy-related protein 8 (Autophagy-related ubiquitin-like modifier ATG8)
ruditapes_c25247	autophagy	other metabolic processes	P	Autophagy-related protein 8 (Autophagy-related ubiquitin-like modifier ATG8)
ruditapes_lrc11082	protein transport	transport	P	Autophagy-related protein 8 (Autophagy-related ubiquitin-like modifier ATG8)
ruditapes_lrc11082	transport	transport	P	Autophagy-related protein 8 (Autophagy-related ubiquitin-like modifier ATG8)
ruditapes_c25247	protein transport	transport	P	Autophagy-related protein 8 (Autophagy-related ubiquitin-like modifier ATG8)
ruditapes_c29728	autophagy	other metabolic processes	P	Ubiquitin-like modifier-activating enzyme ATG7 (ATG12-activating enzyme E1 ATG7) (Autophagy-related protein 7)
ruditapes_c29728	protein transport	transport	P	Ubiquitin-like modifier-activating enzyme ATG7 (ATG12-activating enzyme E1 ATG7) (Autophagy-related protein 7)
ruditapes_c29728	transport	transport	P	Ubiquitin-like modifier-activating enzyme ATG7 (ATG12-activating enzyme E1 ATG7) (Autophagy-related protein 7)
ruditapes_c27367	transport	transport	P	Heterogeneous nuclear rnp K-like protein 2 (KH domain-containing protein 1)
ruditapes_c27367	mRNA transport	transport	P	Heterogeneous nuclear rnp K-like protein 2 (KH domain-containing protein 1)
ruditapes_c27367	chromatin modification	cell organization and biogenesis	P	Heterogeneous nuclear rnp K-like protein 2 (KH domain-containing protein 1)
ruditapes_c27367	regulation of translation	protein metabolism	P	Heterogeneous nuclear rnp K-like protein 2 (KH domain-containing protein 1)
ruditapes2_c2826	tryptophan biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2826	metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2826	cellular amino acid biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2826	aromatic amino acid family biosynthetic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes2_c2826	tryptophan metabolic process	other metabolic processes	P	N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)
ruditapes_c2895	"transcription, DNA-dependent"	RNA metabolism	P	SWR1-complex protein 3
ruditapes_c2895	chromatin modification	cell organization and biogenesis	P	SWR1-complex protein 3
ruditapes_c2895	"regulation of transcription, DNA-dependent"	RNA metabolism	P	SWR1-complex protein 3
ruditapes_c12570	methylation	other metabolic processes	P	Sterol 24-C-methyltransferase (EC 2.1.1.41) (Delta(24)-sterol C-methyltransferase)
ruditapes_c12570	lipid biosynthetic process	other metabolic processes	P	Sterol 24-C-methyltransferase (EC 2.1.1.41) (Delta(24)-sterol C-methyltransferase)
ruditapes_c12570	metabolic process	other metabolic processes	P	Sterol 24-C-methyltransferase (EC 2.1.1.41) (Delta(24)-sterol C-methyltransferase)
ruditapes_c12570	sterol biosynthetic process	other metabolic processes	P	Sterol 24-C-methyltransferase (EC 2.1.1.41) (Delta(24)-sterol C-methyltransferase)
ruditapes_c12570	steroid biosynthetic process	other metabolic processes	P	Sterol 24-C-methyltransferase (EC 2.1.1.41) (Delta(24)-sterol C-methyltransferase)
ruditapes_c21991	cell communication	other biological processes	P	Sorting nexin-41
ruditapes_c21991	autophagy	other metabolic processes	P	Sorting nexin-41
ruditapes_c21991	protein transport	transport	P	Sorting nexin-41
ruditapes_c21991	transport	transport	P	Sorting nexin-41
ruditapes_lrc23144	small GTPase mediated signal transduction	signal transduction	P	ADP-ribosylation factor
ruditapes_lrc23144	transport	transport	P	ADP-ribosylation factor
ruditapes_lrc23144	vesicle-mediated transport	transport	P	ADP-ribosylation factor
ruditapes_lrc23144	protein transport	transport	P	ADP-ribosylation factor
ruditapes2_c1408	ribosomal small subunit biogenesis	other biological processes	P	Probable nucleolar complex protein 14
ruditapes2_c1408	ribosome biogenesis	other biological processes	P	Probable nucleolar complex protein 14
ruditapes2_c1408	rRNA processing	RNA metabolism	P	Probable nucleolar complex protein 14
ruditapes_c1351	autophagy	other metabolic processes	P	Autophagy-related protein 9
ruditapes_c1351	transport	transport	P	Autophagy-related protein 9
ruditapes_c1351	protein transport	transport	P	Autophagy-related protein 9
ruditapes_c8200	cell cycle	cell cycle and proliferation	P	Antagonist of mitotic exit network protein 1
ruditapes_c8200	cell division	other biological processes	P	Antagonist of mitotic exit network protein 1
ruditapes_c8200	mitosis	cell cycle and proliferation	P	Antagonist of mitotic exit network protein 1
ruditapes_c8200	mitosis	cell organization and biogenesis	P	Antagonist of mitotic exit network protein 1
ruditapes_c22245	transport	transport	P	SVP1-like protein 2
ruditapes_c22245	autophagy	other metabolic processes	P	SVP1-like protein 2
ruditapes_c22245	response to starvation	stress response	P	SVP1-like protein 2
ruditapes_c22245	protein transport	transport	P	SVP1-like protein 2
ruditapes_c21996	methylation	other metabolic processes	P	Leucine carboxyl methyltransferase 2 (EC 2.1.1.-) (tRNA wybutosine-synthesizing protein 4)
ruditapes_c21996	tRNA processing	RNA metabolism	P	Leucine carboxyl methyltransferase 2 (EC 2.1.1.-) (tRNA wybutosine-synthesizing protein 4)
ruditapes_c8071	peptide catabolic process	other metabolic processes	P	Leukotriene A-4 hydrolase homolog (LTA-4 hydrolase) (EC 3.3.2.6) (Leukotriene A(4) hydrolase)
ruditapes_c8071	leukotriene biosynthetic process	other metabolic processes	P	Leukotriene A-4 hydrolase homolog (LTA-4 hydrolase) (EC 3.3.2.6) (Leukotriene A(4) hydrolase)
ruditapes_c8071	proteolysis	protein metabolism	P	Leukotriene A-4 hydrolase homolog (LTA-4 hydrolase) (EC 3.3.2.6) (Leukotriene A(4) hydrolase)
ruditapes2_lrc4297	protein transport	transport	P	Protein transport protein SEC24
ruditapes2_lrc4297	vesicle-mediated transport	transport	P	Protein transport protein SEC24
ruditapes2_lrc4297	transport	transport	P	Protein transport protein SEC24
ruditapes2_lrc4297	ER to Golgi vesicle-mediated transport	transport	P	Protein transport protein SEC24
ruditapes2_lrc4297	intracellular protein transport	transport	P	Protein transport protein SEC24
ruditapes_c22676	oxidation reduction	other metabolic processes	P	Probable NADPH reductase TAH18 (EC 1.-.-.-)
ruditapes_lrc32519	autophagy	other metabolic processes	P	Autophagy-related protein 11
ruditapes_lrc32519	protein transport	transport	P	Autophagy-related protein 11
ruditapes_lrc32519	transport	transport	P	Autophagy-related protein 11
ruditapes_c19584	oxidation reduction	other metabolic processes	P	Endoplasmic oxidoreductin-1 (EC 1.8.4.-)
ruditapes_c19584	electron transport chain	other metabolic processes	P	Endoplasmic oxidoreductin-1 (EC 1.8.4.-)
ruditapes_c19584	transport	transport	P	Endoplasmic oxidoreductin-1 (EC 1.8.4.-)
ruditapes_c19584	protein thiol-disulfide exchange	protein metabolism	P	Endoplasmic oxidoreductin-1 (EC 1.8.4.-)
ruditapes_c30670	GPI anchor biosynthetic process	protein metabolism	P	GPI mannosyltransferase 3 (EC 2.4.1.-) (GPI mannosyltransferase III) (GPI-MT-III) (Glycosylphosphatidylinositol-anchor biosynthesis protein 10)
ruditapes_lrc38894	"transcription, DNA-dependent"	RNA metabolism	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_lrc34355	"transcription, DNA-dependent"	RNA metabolism	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_lrc34355	chromatin modification	cell organization and biogenesis	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_lrc34355	histone acetylation	protein metabolism	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_lrc34355	histone acetylation	cell organization and biogenesis	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_lrc38894	histone acetylation	protein metabolism	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_lrc38894	histone acetylation	cell organization and biogenesis	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_lrc38894	chromatin modification	cell organization and biogenesis	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_lrc34355	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_lrc38894	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone acetyltransferase ESA1 (EC 2.3.1.48)
ruditapes_c5849	cell cycle	cell cycle and proliferation	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes_c5849	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes_c5849	"transcription, DNA-dependent"	RNA metabolism	P	RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)
ruditapes2_c2343	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes2_c2343	DNA repair	stress response	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes2_c2343	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes2_c2343	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c31760	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c31760	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c31760	meiosis	cell cycle and proliferation	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes2_c2343	meiosis	cell cycle and proliferation	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c31760	chromatin modification	cell organization and biogenesis	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes2_c2343	chromatin modification	cell organization and biogenesis	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c31760	DNA repair	stress response	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c31760	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase MEC1 (EC 2.7.11.1) (ATR homolog) (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1)
ruditapes_c14395	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase STE20 (EC 2.7.11.1)
ruditapes_c14395	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase STE20 (EC 2.7.11.1)
ruditapes_c14395	response to pheromone	other biological processes	P	Serine/threonine-protein kinase STE20 (EC 2.7.11.1)
ruditapes2_c2089	proteolysis	protein metabolism	P	COP9 signalosome complex subunit 5 (EC 3.4.-.-)
ruditapes_c23941	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16)
ruditapes_c23941	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 16 (Mediator complex subunit 16)
ruditapes_c15884	mRNA processing	RNA metabolism	P	Protein SWT21
ruditapes_c15884	RNA splicing	RNA metabolism	P	Protein SWT21
ruditapes_c19964	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes_c19964	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes_c19964	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes_c19964	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes_c19964	regulation of RNA elongation	RNA metabolism	P	Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
ruditapes_c19682	protein transport	transport	P	Secretory carrier-associated membrane protein 4 (Secretory carrier membrane protein 4)
ruditapes_c19682	transport	transport	P	Secretory carrier-associated membrane protein 4 (Secretory carrier membrane protein 4)
ruditapes_c20858	multidimensional cell growth	other biological processes	P	COBRA-like protein 2 (Protein BRITTLE CULM1-like 2)
ruditapes_c20858	response to salt stress	stress response	P	COBRA-like protein 2 (Protein BRITTLE CULM1-like 2)
ruditapes_c20858	cellulose microfibril organization	cell organization and biogenesis	P	COBRA-like protein 2 (Protein BRITTLE CULM1-like 2)
ruditapes_c8987	2-oxoglutarate metabolic process	other metabolic processes	P	Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42) (Cytosolic NADP-isocitrate dehydrogenase 1) (IDH 1) (IDP 1) (NADP(+)-specific ICDH 1) (Oxalosuccinate decarboxylase 1)
ruditapes_c8987	tricarboxylic acid cycle	other metabolic processes	P	Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42) (Cytosolic NADP-isocitrate dehydrogenase 1) (IDH 1) (IDP 1) (NADP(+)-specific ICDH 1) (Oxalosuccinate decarboxylase 1)
ruditapes_c8987	oxidation reduction	other metabolic processes	P	Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42) (Cytosolic NADP-isocitrate dehydrogenase 1) (IDH 1) (IDP 1) (NADP(+)-specific ICDH 1) (Oxalosuccinate decarboxylase 1)
ruditapes_c8987	isocitrate metabolic process	other metabolic processes	P	Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42) (Cytosolic NADP-isocitrate dehydrogenase 1) (IDH 1) (IDP 1) (NADP(+)-specific ICDH 1) (Oxalosuccinate decarboxylase 1)
ruditapes_c8987	glyoxylate cycle	other metabolic processes	P	Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42) (Cytosolic NADP-isocitrate dehydrogenase 1) (IDH 1) (IDP 1) (NADP(+)-specific ICDH 1) (Oxalosuccinate decarboxylase 1)
ruditapes_s39882	multicellular organismal development	developmental processes	P	Calcium-binding protein NCSA (Neuronal calcium sensor 1 homolog)
ruditapes_s39882	sorocarp development	stress response	P	Calcium-binding protein NCSA (Neuronal calcium sensor 1 homolog)
ruditapes_s39882	sorocarp development	developmental processes	P	Calcium-binding protein NCSA (Neuronal calcium sensor 1 homolog)
ruditapes_c11237	cofactor biosynthetic process	other metabolic processes	P	2-phospho-L-lactate transferase (EC 2.7.8.28) (LPPG:FO 2-phospho-L-lactate transferase)
ruditapes_c27114	ion transport	transport	P	Anoctamin-5 (Gnathodiaphyseal dysplasia 1 protein homolog) (Transmembrane protein 16E)
ruditapes_c27114	transport	transport	P	Anoctamin-5 (Gnathodiaphyseal dysplasia 1 protein homolog) (Transmembrane protein 16E)
ruditapes_c27114	chloride transport	transport	P	Anoctamin-5 (Gnathodiaphyseal dysplasia 1 protein homolog) (Transmembrane protein 16E)
ruditapes_c3590	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c3590	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c10807	metabolic process	other metabolic processes	P	5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase) (5-OPase) (Pyroglutamase)
ruditapes_c8066	urea metabolic process	other metabolic processes	P	Urease subunit alpha (EC 3.5.1.5) (Urea amidohydrolase subunit alpha)
ruditapes_c20872	nitrogen compound metabolic process	other metabolic processes	P	Urease subunit alpha (EC 3.5.1.5) (Urea amidohydrolase subunit alpha)
ruditapes_c8066	nitrogen compound metabolic process	other metabolic processes	P	Urease subunit alpha (EC 3.5.1.5) (Urea amidohydrolase subunit alpha)
ruditapes_c20872	urea metabolic process	other metabolic processes	P	Urease subunit alpha (EC 3.5.1.5) (Urea amidohydrolase subunit alpha)
ruditapes_c19083	peptidoglycan catabolic process	other metabolic processes	P	Peptidoglycan-recognition protein 2 (Hd-PGRP-2)
ruditapes_c19083	innate immune response	stress response	P	Peptidoglycan-recognition protein 2 (Hd-PGRP-2)
ruditapes_s40178	DNA recombination	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_s40178	proteolysis	protein metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_s40178	RNA-dependent DNA replication	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_s40178	viral reproduction	other biological processes	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_s40178	metabolic process	other metabolic processes	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_s40178	DNA integration	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_s40178	viral procapsid maturation	cell organization and biogenesis	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c20961	DNA repair	stress response	P	Mediator of DNA damage checkpoint protein 1
ruditapes_c20961	cell cycle	cell cycle and proliferation	P	Mediator of DNA damage checkpoint protein 1
ruditapes_c20961	DNA repair	DNA metabolism	P	Mediator of DNA damage checkpoint protein 1
ruditapes_c20961	response to DNA damage stimulus	stress response	P	Mediator of DNA damage checkpoint protein 1
ruditapes_c27424	hemolysis by organism of erythrocytes in other organism during symbiotic interaction	other biological processes	P	Echotoxin-2 (Echt 2)
ruditapes_c27424	cytolysis	death	P	Echotoxin-2 (Echt 2)
ruditapes_c9652	cytolysis	death	P	Echotoxin-2 (Echt 2)
ruditapes_c27424	cation transport	transport	P	Echotoxin-2 (Echt 2)
ruditapes_c9652	hemolysis by organism of erythrocytes in other organism during symbiotic interaction	other biological processes	P	Echotoxin-2 (Echt 2)
ruditapes_c9652	pore complex biogenesis	other biological processes	P	Echotoxin-2 (Echt 2)
ruditapes_c27424	ion transport	transport	P	Echotoxin-2 (Echt 2)
ruditapes_c9652	cation transport	transport	P	Echotoxin-2 (Echt 2)
ruditapes_c27424	pore complex biogenesis	other biological processes	P	Echotoxin-2 (Echt 2)
ruditapes_c9652	transport	transport	P	Echotoxin-2 (Echt 2)
ruditapes_c9652	ion transport	transport	P	Echotoxin-2 (Echt 2)
ruditapes_c27424	transport	transport	P	Echotoxin-2 (Echt 2)
ruditapes_c3888	growth hormone secretion	transport	P	Ghrelin [Cleaved into: Ghrelin-23; Ghrelin-24]
ruditapes_c3888	growth hormone secretion	cell-cell signaling	P	Ghrelin [Cleaved into: Ghrelin-23; Ghrelin-24]
ruditapes_c3888	G-protein coupled receptor protein signaling pathway	signal transduction	P	Ghrelin [Cleaved into: Ghrelin-23; Ghrelin-24]
ruditapes2_c4194	ureteric bud formation	developmental processes	P	Heparan sulfate 2-O-sulfotransferase 1 (cHS2ST) (EC 2.8.2.-)
ruditapes2_c4194	heparin metabolic process	other metabolic processes	P	Heparan sulfate 2-O-sulfotransferase 1 (cHS2ST) (EC 2.8.2.-)
ruditapes2_c4194	"heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process"	other metabolic processes	P	Heparan sulfate 2-O-sulfotransferase 1 (cHS2ST) (EC 2.8.2.-)
ruditapes_c8700	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c8700	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c11745	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c11745	rRNA catabolic process	RNA metabolism	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c11745	response to stress	stress response	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c11745	metabolic process	other metabolic processes	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c11745	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c11745	cell cycle arrest	cell cycle and proliferation	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c11745	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c11745	"transcription, DNA-dependent"	RNA metabolism	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c11745	induction of apoptosis	death	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c11745	apoptosis	death	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c11745	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c11745	mRNA processing	RNA metabolism	P	Serine/threonine-protein kinase/endoribonuclease IRE2 (Endoplasmic reticulum-to-nucleus signaling 2) (Inositol-requiring protein 2) (hIRE2p) (Ire1-beta) (IRE1b) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]
ruditapes_c7219	translational initiation	protein metabolism	P	"Probable translation initiation factor, mitochondrial"
ruditapes_c7219	translation	protein metabolism	P	"Probable translation initiation factor, mitochondrial"
ruditapes2_c4415	regulation of epidermal growth factor receptor activity	signal transduction	P	Growth factor (Secreted epidermal growth factor-like)
ruditapes2_c4415	regulation of epidermal growth factor receptor activity	other metabolic processes	P	Growth factor (Secreted epidermal growth factor-like)
ruditapes_c15350	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c15350	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c7043	biological_process	other biological processes	P	Glycophorin-C (CD antigen CD236)
ruditapes2_lrc5037	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c6356	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c6356	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc6662	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_c918	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_s36519	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc18885	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_s35699	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc5193	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c10647	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc5786	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc3681	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc4617	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc5037	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_s36519	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc5037	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c5939	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc4119	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_c605	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c5939	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc15095	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_s36519	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc4119	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc13191	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_s38829	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc4195	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc23687	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc19166	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc5786	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_c605	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc19166	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc5193	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_s35699	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc23687	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c9526	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc23687	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc11984	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_c918	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_s38829	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c10647	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc3681	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc13191	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c10647	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc18885	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c5939	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc4617	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c2562	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc18885	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c9526	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc11984	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc13191	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc6087	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc6087	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc4195	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc5193	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc4195	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c2562	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_s35699	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c2562	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c9526	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc20523	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc15095	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc11984	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc4119	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc19166	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_c6356	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc6087	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_s38829	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc20523	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_c918	transport	transport	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc3681	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc4617	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc6662	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc6662	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc15095	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_c605	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_lrc5786	microtubule-based process	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes_lrc20523	synaptic target recognition	other biological processes	P	"Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2)"
ruditapes2_c2752	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA43 (Twist neighbor protein)
ruditapes2_c2752	biological_process	other biological processes	P	DNA-directed RNA polymerase I subunit RPA43 (Twist neighbor protein)
ruditapes_c10469	transport	transport	P	Protein lin-7 homolog C (Lin-7C) (Mammalian lin-seven protein 3) (MALS-3) (Vertebrate lin-7 homolog 3) (Veli-3)
ruditapes_c10469	neurotransmitter secretion	transport	P	Protein lin-7 homolog C (Lin-7C) (Mammalian lin-seven protein 3) (MALS-3) (Vertebrate lin-7 homolog 3) (Veli-3)
ruditapes_c10469	neurotransmitter secretion	cell-cell signaling	P	Protein lin-7 homolog C (Lin-7C) (Mammalian lin-seven protein 3) (MALS-3) (Vertebrate lin-7 homolog 3) (Veli-3)
ruditapes_c10469	exocytosis	transport	P	Protein lin-7 homolog C (Lin-7C) (Mammalian lin-seven protein 3) (MALS-3) (Vertebrate lin-7 homolog 3) (Veli-3)
ruditapes_c10469	protein transport	transport	P	Protein lin-7 homolog C (Lin-7C) (Mammalian lin-seven protein 3) (MALS-3) (Vertebrate lin-7 homolog 3) (Veli-3)
ruditapes_c51	ion transport	transport	P	V-type proton ATPase subunit e 1 (V-ATPase subunit e 1) (D-serine-regulated transcript 1 protein) (DSR-1) (V-ATPase 9.2 kDa membrane accessory protein) (V-ATPase M9.2 subunit) (Vacuolar proton pump subunit e 1)
ruditapes_c51	transport	transport	P	V-type proton ATPase subunit e 1 (V-ATPase subunit e 1) (D-serine-regulated transcript 1 protein) (DSR-1) (V-ATPase 9.2 kDa membrane accessory protein) (V-ATPase M9.2 subunit) (Vacuolar proton pump subunit e 1)
ruditapes_c51	response to amino acid stimulus	other biological processes	P	V-type proton ATPase subunit e 1 (V-ATPase subunit e 1) (D-serine-regulated transcript 1 protein) (DSR-1) (V-ATPase 9.2 kDa membrane accessory protein) (V-ATPase M9.2 subunit) (Vacuolar proton pump subunit e 1)
ruditapes_c51	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit e 1 (V-ATPase subunit e 1) (D-serine-regulated transcript 1 protein) (DSR-1) (V-ATPase 9.2 kDa membrane accessory protein) (V-ATPase M9.2 subunit) (Vacuolar proton pump subunit e 1)
ruditapes_c51	cell growth	other biological processes	P	V-type proton ATPase subunit e 1 (V-ATPase subunit e 1) (D-serine-regulated transcript 1 protein) (DSR-1) (V-ATPase 9.2 kDa membrane accessory protein) (V-ATPase M9.2 subunit) (Vacuolar proton pump subunit e 1)
ruditapes_c51	proton transport	transport	P	V-type proton ATPase subunit e 1 (V-ATPase subunit e 1) (D-serine-regulated transcript 1 protein) (DSR-1) (V-ATPase 9.2 kDa membrane accessory protein) (V-ATPase M9.2 subunit) (Vacuolar proton pump subunit e 1)
ruditapes_c16275	proteolysis	protein metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.16) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c16275	metabolic process	other metabolic processes	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.16) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c16275	viral reproduction	other biological processes	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.16) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c16275	DNA integration	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.16) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c16275	RNA-dependent DNA replication	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.16) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c16275	viral procapsid maturation	cell organization and biogenesis	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.16) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c16275	DNA recombination	DNA metabolism	P	Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide p2; Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.16) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN)]
ruditapes_c703	oxidation reduction	other metabolic processes	P	Putative peroxiredoxin YgaF (EC 1.11.1.15) (Bacterioferritin comigratory protein) (Thioredoxin reductase)
ruditapes_c12008	phosphoenolpyruvate-dependent sugar phosphotransferase system	signal transduction	P	Putative PTS system EIIBC component YbbF [Includes: Phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system EIIB component); Permease IIC component (PTS system EIIC component)]
ruditapes_c12008	phosphoenolpyruvate-dependent sugar phosphotransferase system	transport	P	Putative PTS system EIIBC component YbbF [Includes: Phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system EIIB component); Permease IIC component (PTS system EIIC component)]
ruditapes_c12008	phosphorylation	other metabolic processes	P	Putative PTS system EIIBC component YbbF [Includes: Phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system EIIB component); Permease IIC component (PTS system EIIC component)]
ruditapes_c12008	transport	transport	P	Putative PTS system EIIBC component YbbF [Includes: Phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system EIIB component); Permease IIC component (PTS system EIIC component)]
ruditapes_c12008	carbohydrate transport	transport	P	Putative PTS system EIIBC component YbbF [Includes: Phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system EIIB component); Permease IIC component (PTS system EIIC component)]
ruditapes2_c1523	lipid catabolic process	other metabolic processes	P	Extracellular esterase EstB (EC 3.1.1.3) (Lipase B) (Triacylglycerol lipase)
ruditapes_c3287	oxidation reduction	other metabolic processes	P	Menaquinol-cytochrome c reductase iron-sulfur subunit (Cytochrome bc1 complex Rieske iron-sulfur protein) (Rieske iron-sulfur protein)
ruditapes_c3287	electron transport chain	other metabolic processes	P	Menaquinol-cytochrome c reductase iron-sulfur subunit (Cytochrome bc1 complex Rieske iron-sulfur protein) (Rieske iron-sulfur protein)
ruditapes_c3287	transport	transport	P	Menaquinol-cytochrome c reductase iron-sulfur subunit (Cytochrome bc1 complex Rieske iron-sulfur protein) (Rieske iron-sulfur protein)
ruditapes_c27291	oxidation reduction	other metabolic processes	P	Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2)
ruditapes_c27291	cellular amino acid biosynthetic process	other metabolic processes	P	Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2)
ruditapes_c27291	proline biosynthetic process	other metabolic processes	P	Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2)
ruditapes_c27093	fatty acid biosynthetic process	other metabolic processes	P	Malonyl CoA-acyl carrier protein transacylase (MCT) (EC 2.3.1.39)
ruditapes_c27093	lipid biosynthetic process	other metabolic processes	P	Malonyl CoA-acyl carrier protein transacylase (MCT) (EC 2.3.1.39)
ruditapes_c27093	metabolic process	other metabolic processes	P	Malonyl CoA-acyl carrier protein transacylase (MCT) (EC 2.3.1.39)
ruditapes_c24000	electron transport chain	other metabolic processes	P	Probable quinol oxidase subunit 2 (EC 1.10.3.-) (Quinol oxidase polypeptide II)
ruditapes_c24000	oxidation reduction	other metabolic processes	P	Probable quinol oxidase subunit 2 (EC 1.10.3.-) (Quinol oxidase polypeptide II)
ruditapes_c24000	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Probable quinol oxidase subunit 2 (EC 1.10.3.-) (Quinol oxidase polypeptide II)
ruditapes_c24000	respiratory electron transport chain	other metabolic processes	P	Probable quinol oxidase subunit 2 (EC 1.10.3.-) (Quinol oxidase polypeptide II)
ruditapes_c24000	transport	transport	P	Probable quinol oxidase subunit 2 (EC 1.10.3.-) (Quinol oxidase polypeptide II)
ruditapes_c15077	two-component signal transduction system (phosphorelay)	signal transduction	P	Response regulator SaeR (Staphylococcus exoprotein expression protein R)
ruditapes_c15077	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Response regulator SaeR (Staphylococcus exoprotein expression protein R)
ruditapes_c15077	response to stimulus	other biological processes	P	Response regulator SaeR (Staphylococcus exoprotein expression protein R)
ruditapes_c15077	"transcription, DNA-dependent"	RNA metabolism	P	Response regulator SaeR (Staphylococcus exoprotein expression protein R)
ruditapes_c15077	pathogenesis	other biological processes	P	Response regulator SaeR (Staphylococcus exoprotein expression protein R)
ruditapes_c4880	pathogenesis	other biological processes	P	Glycyl-glycine endopeptidase LytM (EC 3.4.24.75) (Autolysin LytM)
ruditapes_c4880	cell wall organization	cell organization and biogenesis	P	Glycyl-glycine endopeptidase LytM (EC 3.4.24.75) (Autolysin LytM)
ruditapes_c4880	proteolysis	protein metabolism	P	Glycyl-glycine endopeptidase LytM (EC 3.4.24.75) (Autolysin LytM)
ruditapes_c4022	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Replication regulatory protein repA2 (Protein CopB)
ruditapes_c4022	plasmid maintenance	other biological processes	P	Replication regulatory protein repA2 (Protein CopB)
ruditapes_c4022	"transcription, DNA-dependent"	RNA metabolism	P	Replication regulatory protein repA2 (Protein CopB)
ruditapes_c28606	sulfolipid biosynthetic process	other metabolic processes	P	Trehalose-2-sulfate acyltransferase papA2 (EC 2.3.1.-) (Polyketide synthase-associated protein A2)
ruditapes_c26	cell wall organization	cell organization and biogenesis	P	"Galactofuranosyl transferase GlfT1 (GalTr) (EC 2.4.1.287) (Beta-D-(1->5)galactofuranosyltransferase) (Beta-D-(1->6)galactofuranosyltransferase) (Rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase) (UDP-Galf:alpha-3-L-rhamnosyl-alpha-D-GlcNAc-pyrophosphate polyprenol, UDP-galactofuranosyl transferase)"
ruditapes_c26	cell wall macromolecule biosynthetic process	other metabolic processes	P	"Galactofuranosyl transferase GlfT1 (GalTr) (EC 2.4.1.287) (Beta-D-(1->5)galactofuranosyltransferase) (Beta-D-(1->6)galactofuranosyltransferase) (Rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase) (UDP-Galf:alpha-3-L-rhamnosyl-alpha-D-GlcNAc-pyrophosphate polyprenol, UDP-galactofuranosyl transferase)"
ruditapes_c26	growth	other biological processes	P	"Galactofuranosyl transferase GlfT1 (GalTr) (EC 2.4.1.287) (Beta-D-(1->5)galactofuranosyltransferase) (Beta-D-(1->6)galactofuranosyltransferase) (Rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase) (UDP-Galf:alpha-3-L-rhamnosyl-alpha-D-GlcNAc-pyrophosphate polyprenol, UDP-galactofuranosyl transferase)"
ruditapes_c23813	DNA repair	stress response	P	Probable calcium-binding protein CML13 (Calmodulin-like protein 13)
ruditapes_c23813	DNA repair	DNA metabolism	P	Probable calcium-binding protein CML13 (Calmodulin-like protein 13)
ruditapes_c17477	metabolic process	other metabolic processes	P	4-coumarate--CoA ligase-like 5 (EC 6.2.1.-)
ruditapes_c20808	cellular component organization	cell organization and biogenesis	P	Formin-like protein 3 (OsFH3)
ruditapes_c20808	actin cytoskeleton organization	cell organization and biogenesis	P	Formin-like protein 3 (OsFH3)
ruditapes_c11749	transmembrane transport	transport	P	ABC transporter C family member 5 (ABC transporter ABCC.5) (AtABCC5) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 5) (Glutathione S-conjugate-transporting ATPase 5) (Multidrug resistance-associated protein 5)
ruditapes_c8983	cellular potassium ion homeostasis	other biological processes	P	ABC transporter C family member 5 (ABC transporter ABCC.5) (AtABCC5) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 5) (Glutathione S-conjugate-transporting ATPase 5) (Multidrug resistance-associated protein 5)
ruditapes_c11749	cellular potassium ion homeostasis	other biological processes	P	ABC transporter C family member 5 (ABC transporter ABCC.5) (AtABCC5) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 5) (Glutathione S-conjugate-transporting ATPase 5) (Multidrug resistance-associated protein 5)
ruditapes_c11749	response to salt stress	stress response	P	ABC transporter C family member 5 (ABC transporter ABCC.5) (AtABCC5) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 5) (Glutathione S-conjugate-transporting ATPase 5) (Multidrug resistance-associated protein 5)
ruditapes_c8983	transmembrane transport	transport	P	ABC transporter C family member 5 (ABC transporter ABCC.5) (AtABCC5) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 5) (Glutathione S-conjugate-transporting ATPase 5) (Multidrug resistance-associated protein 5)
ruditapes_c11749	ATP catabolic process	other metabolic processes	P	ABC transporter C family member 5 (ABC transporter ABCC.5) (AtABCC5) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 5) (Glutathione S-conjugate-transporting ATPase 5) (Multidrug resistance-associated protein 5)
ruditapes_c11749	transport	transport	P	ABC transporter C family member 5 (ABC transporter ABCC.5) (AtABCC5) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 5) (Glutathione S-conjugate-transporting ATPase 5) (Multidrug resistance-associated protein 5)
ruditapes_c8983	response to salt stress	stress response	P	ABC transporter C family member 5 (ABC transporter ABCC.5) (AtABCC5) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 5) (Glutathione S-conjugate-transporting ATPase 5) (Multidrug resistance-associated protein 5)
ruditapes_c8983	ATP catabolic process	other metabolic processes	P	ABC transporter C family member 5 (ABC transporter ABCC.5) (AtABCC5) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 5) (Glutathione S-conjugate-transporting ATPase 5) (Multidrug resistance-associated protein 5)
ruditapes_c8983	transport	transport	P	ABC transporter C family member 5 (ABC transporter ABCC.5) (AtABCC5) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 5) (Glutathione S-conjugate-transporting ATPase 5) (Multidrug resistance-associated protein 5)
ruditapes2_c2731	proteolysis	protein metabolism	P	Dipeptidyl peptidase family member 1 (EC 3.4.14.-)
ruditapes_c23573	tRNA thio-modification	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_c23573	tRNA wobble uridine modification	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_c23573	tRNA processing	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_c84	translation	protein metabolism	P	"39S ribosomal protein L41, mitochondrial (L41mt) (MRP-L41)"
ruditapes_lrc33325	chromatin silencing at rDNA	RNA metabolism	P	Ribosomal RNA-processing protein 8 (EC 2.1.1.-)
ruditapes_lrc33325	methylation	other metabolic processes	P	Ribosomal RNA-processing protein 8 (EC 2.1.1.-)
ruditapes_lrc33325	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Ribosomal RNA-processing protein 8 (EC 2.1.1.-)
ruditapes_lrc33325	rRNA processing	RNA metabolism	P	Ribosomal RNA-processing protein 8 (EC 2.1.1.-)
ruditapes_lrc33325	"transcription, DNA-dependent"	RNA metabolism	P	Ribosomal RNA-processing protein 8 (EC 2.1.1.-)
ruditapes_lrc33325	chromatin modification	cell organization and biogenesis	P	Ribosomal RNA-processing protein 8 (EC 2.1.1.-)
ruditapes_c22516	biological_process	other biological processes	P	Transmembrane and TPR repeat-containing protein CG4050
ruditapes_c19248	metabolic process	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_s38082	generation of precursor metabolites and energy	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_c19248	lipid metabolic process	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_c19248	generation of precursor metabolites and energy	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_s38082	metabolic process	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_s38082	fatty acid beta-oxidation	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_s38082	fatty acid oxidation	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_c19248	fatty acid metabolic process	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_s38082	oxidation reduction	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_c19248	fatty acid oxidation	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_s38082	prostaglandin metabolic process	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_c19248	prostaglandin metabolic process	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_c19248	fatty acid beta-oxidation	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_s38082	fatty acid metabolic process	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_c19248	oxidation reduction	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes_s38082	lipid metabolic process	other metabolic processes	P	Probable peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6)
ruditapes2_c2523	transport	transport	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c2523	multicellular organismal development	developmental processes	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c2523	microtubule cytoskeleton organization	cell organization and biogenesis	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c2523	ATP catabolic process	other metabolic processes	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c2523	proteolysis	protein metabolism	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c2523	endoplasmic reticulum organization	cell organization and biogenesis	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c2523	oogenesis	other biological processes	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c2523	Golgi organization	cell organization and biogenesis	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c2523	regulation of pole plasm oskar mRNA localization	developmental processes	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c2523	regulation of pole plasm oskar mRNA localization	cell organization and biogenesis	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c2523	ER-associated protein catabolic process	protein metabolism	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c2523	cell differentiation	other biological processes	P	Transitional endoplasmic reticulum ATPase TER94 (EC 3.6.4.6) (Valosin-containing protein homolog)
ruditapes2_c1214	"fertilization, exchange of chromosomal proteins"	cell organization and biogenesis	P	Chromodomain-helicase-DNA-binding protein 1 (CHD-1) (EC 3.6.4.12) (ATP-dependent helicase Chd1)
ruditapes2_c1214	oogenesis	other biological processes	P	Chromodomain-helicase-DNA-binding protein 1 (CHD-1) (EC 3.6.4.12) (ATP-dependent helicase Chd1)
ruditapes2_c1214	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 1 (CHD-1) (EC 3.6.4.12) (ATP-dependent helicase Chd1)
ruditapes2_c1214	chromatin modification	cell organization and biogenesis	P	Chromodomain-helicase-DNA-binding protein 1 (CHD-1) (EC 3.6.4.12) (ATP-dependent helicase Chd1)
ruditapes2_c1214	imaginal disc-derived wing morphogenesis	developmental processes	P	Chromodomain-helicase-DNA-binding protein 1 (CHD-1) (EC 3.6.4.12) (ATP-dependent helicase Chd1)
ruditapes2_c1214	"transcription, DNA-dependent"	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 1 (CHD-1) (EC 3.6.4.12) (ATP-dependent helicase Chd1)
ruditapes_lrc38851	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_lrc38851	chondroitin sulfate biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes2_c3375	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_lrc38851	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c5155	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c2132	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c2132	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_lrc23201	chondroitin sulfate biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c5155	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c26231	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes2_c3375	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c5155	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_lrc23201	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c26231	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c2132	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c2132	chondroitin sulfate biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_lrc38851	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes2_c3375	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_lrc23201	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c26231	chondroitin sulfate biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes2_c3375	chondroitin sulfate biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_lrc23201	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes2_lrc3860	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c26231	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c5155	chondroitin sulfate biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes2_lrc3860	D-xylose metabolic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes2_lrc3860	chondroitin sulfate biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes2_lrc3860	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c26231	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes2_c3375	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c5155	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes2_lrc3860	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_lrc23201	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c2132	chondroitin sulfate proteoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_lrc38851	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase oxt (EC 2.4.2.26) (Imaginal disk type I) (Peptide O-xylosyltransferase)
ruditapes_c18794	oligosaccharide-lipid intermediate assembly	protein metabolism	P	"Alpha-1,3/1,6-mannosyltransferase ALG2 (EC 2.4.1.132) (EC 2.4.1.257) (Asparagine-linked glycosylation protein 2 homolog) (GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase) (GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase) (GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase)"
ruditapes_c18794	biosynthetic process	other metabolic processes	P	"Alpha-1,3/1,6-mannosyltransferase ALG2 (EC 2.4.1.132) (EC 2.4.1.257) (Asparagine-linked glycosylation protein 2 homolog) (GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase) (GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase) (GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase)"
ruditapes_c20848	glucose homeostasis	other biological processes	P	Cytochrome b5 reductase 4 (EC 1.6.2.2) (Flavohemoprotein b5/b5R) (b5+b5R) (N-terminal cytochrome b5 and cytochrome b5 oxidoreductase domain-containing protein) (cb5/cb5R)
ruditapes_c20848	cell development	other biological processes	P	Cytochrome b5 reductase 4 (EC 1.6.2.2) (Flavohemoprotein b5/b5R) (b5+b5R) (N-terminal cytochrome b5 and cytochrome b5 oxidoreductase domain-containing protein) (cb5/cb5R)
ruditapes_c20848	response to antibiotic	other biological processes	P	Cytochrome b5 reductase 4 (EC 1.6.2.2) (Flavohemoprotein b5/b5R) (b5+b5R) (N-terminal cytochrome b5 and cytochrome b5 oxidoreductase domain-containing protein) (cb5/cb5R)
ruditapes_c20848	generation of precursor metabolites and energy	other metabolic processes	P	Cytochrome b5 reductase 4 (EC 1.6.2.2) (Flavohemoprotein b5/b5R) (b5+b5R) (N-terminal cytochrome b5 and cytochrome b5 oxidoreductase domain-containing protein) (cb5/cb5R)
ruditapes_c20848	detection of oxygen	other biological processes	P	Cytochrome b5 reductase 4 (EC 1.6.2.2) (Flavohemoprotein b5/b5R) (b5+b5R) (N-terminal cytochrome b5 and cytochrome b5 oxidoreductase domain-containing protein) (cb5/cb5R)
ruditapes_c20848	oxidation reduction	other metabolic processes	P	Cytochrome b5 reductase 4 (EC 1.6.2.2) (Flavohemoprotein b5/b5R) (b5+b5R) (N-terminal cytochrome b5 and cytochrome b5 oxidoreductase domain-containing protein) (cb5/cb5R)
ruditapes_c20848	insulin secretion	transport	P	Cytochrome b5 reductase 4 (EC 1.6.2.2) (Flavohemoprotein b5/b5R) (b5+b5R) (N-terminal cytochrome b5 and cytochrome b5 oxidoreductase domain-containing protein) (cb5/cb5R)
ruditapes_c20848	insulin secretion	cell-cell signaling	P	Cytochrome b5 reductase 4 (EC 1.6.2.2) (Flavohemoprotein b5/b5R) (b5+b5R) (N-terminal cytochrome b5 and cytochrome b5 oxidoreductase domain-containing protein) (cb5/cb5R)
ruditapes_c20848	superoxide metabolic process	other metabolic processes	P	Cytochrome b5 reductase 4 (EC 1.6.2.2) (Flavohemoprotein b5/b5R) (b5+b5R) (N-terminal cytochrome b5 and cytochrome b5 oxidoreductase domain-containing protein) (cb5/cb5R)
ruditapes_c26196	regulation of cell shape	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein 1 (Specifically Rac1-associated protein 1) (Sra-1) (p140sra-1)
ruditapes_c26196	nervous system development	developmental processes	P	Cytoplasmic FMR1-interacting protein 1 (Specifically Rac1-associated protein 1) (Sra-1) (p140sra-1)
ruditapes_c26196	ruffle organization	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein 1 (Specifically Rac1-associated protein 1) (Sra-1) (p140sra-1)
ruditapes_c26196	lamellipodium assembly	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein 1 (Specifically Rac1-associated protein 1) (Sra-1) (p140sra-1)
ruditapes_c26196	axon extension	developmental processes	P	Cytoplasmic FMR1-interacting protein 1 (Specifically Rac1-associated protein 1) (Sra-1) (p140sra-1)
ruditapes_c26196	axon extension	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein 1 (Specifically Rac1-associated protein 1) (Sra-1) (p140sra-1)
ruditapes_c26196	multicellular organismal development	developmental processes	P	Cytoplasmic FMR1-interacting protein 1 (Specifically Rac1-associated protein 1) (Sra-1) (p140sra-1)
ruditapes_c26196	cell differentiation	other biological processes	P	Cytoplasmic FMR1-interacting protein 1 (Specifically Rac1-associated protein 1) (Sra-1) (p140sra-1)
ruditapes_c18500	hexose biosynthetic process	other metabolic processes	P	Carbohydrate sulfotransferase 15 (EC 2.8.2.33) (B-cell RAG-associated gene protein) (hBRAG) (N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase) (GalNAc4S-6ST)
ruditapes_c31216	oligopeptide transport	transport	P	Uncharacterized oligopeptide transporter C1840.12
ruditapes_c20447	transmembrane transport	transport	P	Uncharacterized oligopeptide transporter C1840.12
ruditapes_c31216	protein transport	transport	P	Uncharacterized oligopeptide transporter C1840.12
ruditapes_c31216	peptide transport	transport	P	Uncharacterized oligopeptide transporter C1840.12
ruditapes_c20447	peptide transport	transport	P	Uncharacterized oligopeptide transporter C1840.12
ruditapes_c31216	transport	transport	P	Uncharacterized oligopeptide transporter C1840.12
ruditapes_c20447	protein transport	transport	P	Uncharacterized oligopeptide transporter C1840.12
ruditapes_c20447	oligopeptide transport	transport	P	Uncharacterized oligopeptide transporter C1840.12
ruditapes_c31216	transmembrane transport	transport	P	Uncharacterized oligopeptide transporter C1840.12
ruditapes_c20447	transport	transport	P	Uncharacterized oligopeptide transporter C1840.12
ruditapes_c26351	oxidation reduction	other metabolic processes	P	UPF0676 protein C1494.01
ruditapes_c746	proteolysis	protein metabolism	P	Coagulation factor X-activating enzyme heavy chain (EC 3.4.24.58) (Coagulation factor X-activating enzyme chain alpha) (RVV-X heavy chain) (Russellysin) (Snake venom metalloproteinase) (SVMP)
ruditapes_c746	blood coagulation	stress response	P	Coagulation factor X-activating enzyme heavy chain (EC 3.4.24.58) (Coagulation factor X-activating enzyme chain alpha) (RVV-X heavy chain) (Russellysin) (Snake venom metalloproteinase) (SVMP)
ruditapes_c22657	angiogenesis	developmental processes	P	Collagen alpha-1(VIII) chain
ruditapes_c22657	cell adhesion	cell adhesion	P	Collagen alpha-1(VIII) chain
ruditapes2_c3451	proteolysis	protein metabolism	P	Venom protease (EC 3.4.21.-) (allergen Bom p 4)
ruditapes2_c4636	proteolysis	protein metabolism	P	Venom protease (EC 3.4.21.-) (allergen Bom p 4)
ruditapes2_c849	metabolic process	other metabolic processes	P	"Endo-1,6-beta-D-glucanase (EC 3.2.1.75) (Beta-1,6-glucanase Neg1) (Glucan endo-1,6-beta-glucosidase)"
ruditapes2_c849	carbohydrate metabolic process	other metabolic processes	P	"Endo-1,6-beta-D-glucanase (EC 3.2.1.75) (Beta-1,6-glucanase Neg1) (Glucan endo-1,6-beta-glucosidase)"
ruditapes2_c849	lysosome organization	cell organization and biogenesis	P	"Endo-1,6-beta-D-glucanase (EC 3.2.1.75) (Beta-1,6-glucanase Neg1) (Glucan endo-1,6-beta-glucosidase)"
ruditapes2_c849	sphingolipid metabolic process	other metabolic processes	P	"Endo-1,6-beta-D-glucanase (EC 3.2.1.75) (Beta-1,6-glucanase Neg1) (Glucan endo-1,6-beta-glucosidase)"
ruditapes_c3510	signal transduction	signal transduction	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes2_lrc5165	signal transduction	signal transduction	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_s38702	sensory perception of taste	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_lrc33355	biological_process	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_c3510	response to stimulus	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_c3510	biological_process	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_s38702	signal transduction	signal transduction	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_s38702	response to stimulus	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_s38702	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_lrc33355	sensory perception of taste	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes2_lrc5165	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_c3510	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_lrc33355	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_s38702	biological_process	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes2_lrc5165	response to stimulus	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_c3510	sensory perception of taste	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_lrc33355	signal transduction	signal transduction	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes2_lrc5165	biological_process	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes_lrc33355	response to stimulus	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes2_lrc5165	sensory perception of taste	other biological processes	P	Taste receptor type 2 member 117 (T2R117) (mT2R54)
ruditapes2_lrc5549	regulation of transmembrane ion transport	transport	P	Sodium channel subunit beta-4
ruditapes_lrc33788	sodium ion transport	transport	P	Sodium channel subunit beta-4
ruditapes2_lrc5549	ion transport	transport	P	Sodium channel subunit beta-4
ruditapes_lrc33788	transport	transport	P	Sodium channel subunit beta-4
ruditapes_lrc33788	ion transport	transport	P	Sodium channel subunit beta-4
ruditapes2_lrc4487	transport	transport	P	Sodium channel subunit beta-4
ruditapes2_lrc4487	ion transport	transport	P	Sodium channel subunit beta-4
ruditapes2_lrc4487	sodium ion transport	transport	P	Sodium channel subunit beta-4
ruditapes_lrc33788	regulation of transmembrane ion transport	transport	P	Sodium channel subunit beta-4
ruditapes2_lrc4487	regulation of transmembrane ion transport	transport	P	Sodium channel subunit beta-4
ruditapes2_lrc5549	transport	transport	P	Sodium channel subunit beta-4
ruditapes2_lrc5549	sodium ion transport	transport	P	Sodium channel subunit beta-4
ruditapes_c12599	multicellular organismal development	developmental processes	P	Retrotransposon-like protein 1 (Mammalian retrotransposon derived protein 1) (Paternally expressed gene 11 protein) (Retrotransposon-derived protein PEG11)
ruditapes_c22426	biological_process	other biological processes	P	Ovochymase-2 (EC 3.4.21.-) (Oviductin)
ruditapes_c22426	proteolysis	protein metabolism	P	Ovochymase-2 (EC 3.4.21.-) (Oviductin)
ruditapes_c20849	apoptosis	death	P	Ubiquitin carboxyl-terminal hydrolase 17 (USP17) (EC 3.4.19.12) (Deubiquitinating enzyme 17-like protein 2) (Deubiquitinating protein 3) (DUB-3) (Deubiquitinating protein 6) (Ubiquitin carboxyl-terminal hydrolase 17-like protein 2) (Ubiquitin thioesterase 17-like protein 2) (Ubiquitin-specific-processing protease 17-like protein 2)
ruditapes_c20849	G2/M transition checkpoint	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 17 (USP17) (EC 3.4.19.12) (Deubiquitinating enzyme 17-like protein 2) (Deubiquitinating protein 3) (DUB-3) (Deubiquitinating protein 6) (Ubiquitin carboxyl-terminal hydrolase 17-like protein 2) (Ubiquitin thioesterase 17-like protein 2) (Ubiquitin-specific-processing protease 17-like protein 2)
ruditapes_c20849	protein deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 17 (USP17) (EC 3.4.19.12) (Deubiquitinating enzyme 17-like protein 2) (Deubiquitinating protein 3) (DUB-3) (Deubiquitinating protein 6) (Ubiquitin carboxyl-terminal hydrolase 17-like protein 2) (Ubiquitin thioesterase 17-like protein 2) (Ubiquitin-specific-processing protease 17-like protein 2)
ruditapes_c20849	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 17 (USP17) (EC 3.4.19.12) (Deubiquitinating enzyme 17-like protein 2) (Deubiquitinating protein 3) (DUB-3) (Deubiquitinating protein 6) (Ubiquitin carboxyl-terminal hydrolase 17-like protein 2) (Ubiquitin thioesterase 17-like protein 2) (Ubiquitin-specific-processing protease 17-like protein 2)
ruditapes_c20849	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 17 (USP17) (EC 3.4.19.12) (Deubiquitinating enzyme 17-like protein 2) (Deubiquitinating protein 3) (DUB-3) (Deubiquitinating protein 6) (Ubiquitin carboxyl-terminal hydrolase 17-like protein 2) (Ubiquitin thioesterase 17-like protein 2) (Ubiquitin-specific-processing protease 17-like protein 2)
ruditapes_c20849	cell cycle	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 17 (USP17) (EC 3.4.19.12) (Deubiquitinating enzyme 17-like protein 2) (Deubiquitinating protein 3) (DUB-3) (Deubiquitinating protein 6) (Ubiquitin carboxyl-terminal hydrolase 17-like protein 2) (Ubiquitin thioesterase 17-like protein 2) (Ubiquitin-specific-processing protease 17-like protein 2)
ruditapes_c20849	G1/S transition checkpoint	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 17 (USP17) (EC 3.4.19.12) (Deubiquitinating enzyme 17-like protein 2) (Deubiquitinating protein 3) (DUB-3) (Deubiquitinating protein 6) (Ubiquitin carboxyl-terminal hydrolase 17-like protein 2) (Ubiquitin thioesterase 17-like protein 2) (Ubiquitin-specific-processing protease 17-like protein 2)
ruditapes_lrc35953	lipid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III protein 2) (Beta-ketoacyl-ACP synthase III 2) (KAS III 2)
ruditapes_lrc35953	metabolic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III protein 2) (Beta-ketoacyl-ACP synthase III 2) (KAS III 2)
ruditapes_lrc35953	fatty acid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III protein 2) (Beta-ketoacyl-ACP synthase III 2) (KAS III 2)
ruditapes_c16671	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c16671	carbohydrate metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c16671	glycerol-3-phosphate catabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c16671	oxidation reduction	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c16671	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
ruditapes_c18614	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c18614	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c18614	oxidation reduction	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_c18614	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH)
ruditapes_s36347	peptidoglycan-based cell wall biogenesis	other biological processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_s36347	cell wall organization	cell organization and biogenesis	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_s36347	tetrahydrofolylpolyglutamate biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_s36347	biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_s36347	cell cycle	cell cycle and proliferation	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_s36347	peptidoglycan biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_s36347	folic acid and derivative biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_s36347	cell division	other biological processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_s36347	regulation of cell shape	cell organization and biogenesis	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c15164	phosphonate transport	transport	P	Phosphonates import ATP-binding protein PhnC (EC 3.6.3.28)
ruditapes_c15164	transport	transport	P	Phosphonates import ATP-binding protein PhnC (EC 3.6.3.28)
ruditapes_c15164	ATP catabolic process	other metabolic processes	P	Phosphonates import ATP-binding protein PhnC (EC 3.6.3.28)
ruditapes_c5291	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c5291	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c5291	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c5291	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c5291	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c15510	purine ribonucleoside salvage	other metabolic processes	P	Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7)
ruditapes_c15510	nucleoside metabolic process	other metabolic processes	P	Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7)
ruditapes_c15510	adenine salvage	other metabolic processes	P	Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7)
ruditapes_c14252	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c14252	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c14252	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c14252	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c6022	oxidation reduction	other metabolic processes	P	Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone])
ruditapes_c6022	tricarboxylic acid cycle	other metabolic processes	P	Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone])
ruditapes_c17921	biosynthetic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase 2 (EC 2.7.7.27) (ADP-glucose pyrophosphorylase 2) (ADPGlc PPase 2) (ADP-glucose synthase 2)
ruditapes_c17921	glycogen biosynthetic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase 2 (EC 2.7.7.27) (ADP-glucose pyrophosphorylase 2) (ADPGlc PPase 2) (ADP-glucose synthase 2)
ruditapes_c17921	carbohydrate metabolic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase 2 (EC 2.7.7.27) (ADP-glucose pyrophosphorylase 2) (ADPGlc PPase 2) (ADP-glucose synthase 2)
ruditapes_c17921	glycogen metabolic process	other metabolic processes	P	Glucose-1-phosphate adenylyltransferase 2 (EC 2.7.7.27) (ADP-glucose pyrophosphorylase 2) (ADPGlc PPase 2) (ADP-glucose synthase 2)
ruditapes_c21037	translation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c21037	methylation	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c21037	translational initiation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c21037	biosynthetic process	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c31390	lysyl-tRNA aminoacylation	protein metabolism	P	Elongation factor P--(R)-beta-lysine ligase (EF-P--(R)-beta-lysine ligase) (EC 6.3.1.-) (EF-P post-translational modification enzyme A) (EF-P-lysine lysyltransferase)
ruditapes_c31390	lysyl-tRNA aminoacylation	RNA metabolism	P	Elongation factor P--(R)-beta-lysine ligase (EF-P--(R)-beta-lysine ligase) (EC 6.3.1.-) (EF-P post-translational modification enzyme A) (EF-P-lysine lysyltransferase)
ruditapes_c31390	tRNA aminoacylation for protein translation	RNA metabolism	P	Elongation factor P--(R)-beta-lysine ligase (EF-P--(R)-beta-lysine ligase) (EC 6.3.1.-) (EF-P post-translational modification enzyme A) (EF-P-lysine lysyltransferase)
ruditapes_c31390	tRNA aminoacylation for protein translation	protein metabolism	P	Elongation factor P--(R)-beta-lysine ligase (EF-P--(R)-beta-lysine ligase) (EC 6.3.1.-) (EF-P post-translational modification enzyme A) (EF-P-lysine lysyltransferase)
ruditapes2_c1521	phosphorylation	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes2_c1521	arginine biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes2_c1521	cellular amino acid biosynthetic process	other metabolic processes	P	Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK)
ruditapes_c7030	lipid metabolic process	other metabolic processes	P	3-ketoacyl-CoA thiolase (EC 2.3.1.16) (ACSs) (Acetyl-CoA acyltransferase) (Acyl-CoA ligase) (Beta-ketothiolase) (Fatty acid oxidation complex subunit beta)
ruditapes_c7030	metabolic process	other metabolic processes	P	3-ketoacyl-CoA thiolase (EC 2.3.1.16) (ACSs) (Acetyl-CoA acyltransferase) (Acyl-CoA ligase) (Beta-ketothiolase) (Fatty acid oxidation complex subunit beta)
ruditapes_c7030	lipid catabolic process	other metabolic processes	P	3-ketoacyl-CoA thiolase (EC 2.3.1.16) (ACSs) (Acetyl-CoA acyltransferase) (Acyl-CoA ligase) (Beta-ketothiolase) (Fatty acid oxidation complex subunit beta)
ruditapes_c7030	fatty acid metabolic process	other metabolic processes	P	3-ketoacyl-CoA thiolase (EC 2.3.1.16) (ACSs) (Acetyl-CoA acyltransferase) (Acyl-CoA ligase) (Beta-ketothiolase) (Fatty acid oxidation complex subunit beta)
ruditapes_c25206	DNA repair	stress response	P	Error-prone DNA polymerase (EC 2.7.7.7)
ruditapes_c25206	DNA repair	DNA metabolism	P	Error-prone DNA polymerase (EC 2.7.7.7)
ruditapes_c25206	response to DNA damage stimulus	stress response	P	Error-prone DNA polymerase (EC 2.7.7.7)
ruditapes_c25206	DNA replication	DNA metabolism	P	Error-prone DNA polymerase (EC 2.7.7.7)
ruditapes_c29805	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Cyclic pyranopterin monophosphate synthase (EC 4.1.99.18) (Molybdenum cofactor biosynthesis protein A)
ruditapes_c24847	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c24847	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c24847	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c24847	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c24847	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c22653	menaquinone biosynthetic process	other metabolic processes	P	"Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)"
ruditapes_c22653	ubiquinone biosynthetic process	other metabolic processes	P	"Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)"
ruditapes_c22653	methylation	other metabolic processes	P	"Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)"
ruditapes_c28968	methylation	other metabolic processes	P	tRNA (mo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c28968	tRNA wobble uridine modification	RNA metabolism	P	tRNA (mo5U34)-methyltransferase (EC 2.1.1.-)
ruditapes_c6274	translation	protein metabolism	P	50S ribosomal protein L2
ruditapes_c16848	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c16848	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c16848	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c16848	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c16848	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c19713	proteolysis	protein metabolism	P	Prolyl tripeptidyl peptidase (PTP) (EC 3.4.14.12) (Prolyl tripeptidyl peptidase 81.8 kDa form) (Prolyl tripeptidyl peptidase A) [Cleaved into: Prolyl tripeptidyl peptidase 75.8 kDa form]
ruditapes2_lrc7295	folic acid and derivative biosynthetic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes2_lrc7295	one-carbon compound metabolic process	other metabolic processes	P	Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
ruditapes_c29949	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c29949	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c25614	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')
ruditapes_c21680	cell division	other biological processes	P	Nucleoid occlusion factor SlmA
ruditapes_c21680	cell cycle	cell cycle and proliferation	P	Nucleoid occlusion factor SlmA
ruditapes_c14000	enterobacterial common antigen biosynthetic process	other metabolic processes	P	4-alpha-L-fucosyltransferase (EC 2.4.1.-) (TDP-Fuc4NAc:lipid II Fuc4NAc transferase) (Fuc4NAc transferase)
ruditapes_c24533	isoprenoid biosynthetic process	other metabolic processes	P	Isopentenyl-diphosphate Delta-isomerase 2 (IPP isomerase 2) (EC 5.3.3.2) (IPP:DMAPP isomerase 2) (Isopentenyl pyrophosphate isomerase 2)
ruditapes_lrc27077	putrescine biosynthetic process	other metabolic processes	P	Agmatinase (EC 3.5.3.11) (Agmatine ureohydrolase) (AUH)
ruditapes_lrc27077	spermidine biosynthetic process	other metabolic processes	P	Agmatinase (EC 3.5.3.11) (Agmatine ureohydrolase) (AUH)
ruditapes_lrc27077	polyamine biosynthetic process	other metabolic processes	P	Agmatinase (EC 3.5.3.11) (Agmatine ureohydrolase) (AUH)
ruditapes2_c654	pyridoxine biosynthetic process	other metabolic processes	P	Pyridoxine 5'-phosphate synthase (PNP synthase) (EC 2.6.99.2)
ruditapes_lrc24668	oxidation reduction	other metabolic processes	P	FMN-dependent NADH-azoreductase (EC 1.7.-.-) (Azo-dye reductase) (FMN-dependent NADH-azo compound oxidoreductase)
ruditapes_c8524	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c8524	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c8524	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c14620	protein catabolic process	protein metabolism	P	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase)
ruditapes2_c1982	histidine biosynthetic process	other metabolic processes	P	Histidine biosynthesis bifunctional protein HisIE [Includes: Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19); Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)]
ruditapes2_c1982	metabolic process	other metabolic processes	P	Histidine biosynthesis bifunctional protein HisIE [Includes: Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19); Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)]
ruditapes2_c1982	cellular amino acid biosynthetic process	other metabolic processes	P	Histidine biosynthesis bifunctional protein HisIE [Includes: Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19); Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)]
ruditapes_lrc34948	lipid biosynthetic process	other metabolic processes	P	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase (UDP-3-O-(3-OHC14)-GlcN N-acyltransferase) (EC 2.3.1.191)
ruditapes_lrc34948	lipid A biosynthetic process	other metabolic processes	P	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase (UDP-3-O-(3-OHC14)-GlcN N-acyltransferase) (EC 2.3.1.191)
ruditapes_lrc13827	tRNA processing	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_lrc13827	tRNA wobble uridine modification	RNA metabolism	P	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
ruditapes_c22871	phospholipid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_c22871	fatty acid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_c5257	metabolic process	other metabolic processes	P	Ribonuclease Y (RNase Y) (EC 3.1.-.-)
ruditapes_c30665	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (Acyl-PO4 G3P acyltransferase) (Acyl-phosphate--glycerol-3-phosphate acyltransferase) (G3P acyltransferase) (GPAT) (EC 2.3.1.n3) (Lysophosphatidic acid synthase) (LPA synthase)
ruditapes_c16450	DNA repair	stress response	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_c16450	DNA repair	DNA metabolism	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_c16450	response to DNA damage stimulus	stress response	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_lrc10062	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_lrc10062	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_lrc10062	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c10643	proteolysis	protein metabolism	P	ATP-dependent Clp protease proteolytic subunit 1 (EC 3.4.21.92) (Endopeptidase Clp 1)
ruditapes_c25573	metabolic process	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase 2 (Poly(P)/ATP NAD kinase 2) (EC 2.7.1.23)
ruditapes_c25573	phosphorylation	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase 2 (Poly(P)/ATP NAD kinase 2) (EC 2.7.1.23)
ruditapes_lrc22587	GTP catabolic process	other metabolic processes	P	Peptide chain release factor 3 (RF-3)
ruditapes_lrc22587	translation	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_lrc22587	translational termination	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_lrc22587	translational termination	cell organization and biogenesis	P	Peptide chain release factor 3 (RF-3)
ruditapes_c18240	carbohydrate metabolic process	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_c18240	pentose-phosphate shunt	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes2_c1031	oxidation reduction	other metabolic processes	P	NAD(P)H-quinone oxidoreductase subunit I (EC 1.6.5.-) (NAD(P)H dehydrogenase I subunit I) (NDH-1 subunit I) (NDH-I)
ruditapes_c27769	arginine metabolic process	other metabolic processes	P	Acetylornithine aminotransferase (ACOAT) (EC 2.6.1.11)
ruditapes_c27769	cellular amino acid biosynthetic process	other metabolic processes	P	Acetylornithine aminotransferase (ACOAT) (EC 2.6.1.11)
ruditapes_c27769	arginine biosynthetic process	other metabolic processes	P	Acetylornithine aminotransferase (ACOAT) (EC 2.6.1.11)
ruditapes_c2626	tricarboxylic acid cycle	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_c2626	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_c16277	cell division	other biological processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c16277	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c16277	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c16277	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c16277	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c16277	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_c758	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c28349	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c28349	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c28349	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c17824	carbohydrate metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes_c17824	cellular metabolic process	other metabolic processes	P	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME)
ruditapes_c5277	nitrogen compound metabolic process	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes_c5277	metabolic process	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes_c29732	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c29732	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c29732	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c29732	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c29732	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c29732	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes2_lrc7092	D-amino acid catabolic process	other metabolic processes	P	D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)
ruditapes_c20480	cell wall organization	cell organization and biogenesis	P	Probable xyloglucan glycosyltransferase 3 (EC 2.4.1.-) (Cellulose synthase-like protein C3) (OsCslC3)
ruditapes_c12398	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 43 (ABC transporter ABCG.43) (AtABCG43) (Putative pleiotropic drug resistance protein 15)
ruditapes_c12398	transport	transport	P	ABC transporter G family member 43 (ABC transporter ABCG.43) (AtABCG43) (Putative pleiotropic drug resistance protein 15)
ruditapes_c6538	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 38 (ABC transporter ABCG.38) (AtABCG38) (Probable pleiotropic drug resistance protein 10)
ruditapes_c6538	transport	transport	P	ABC transporter G family member 38 (ABC transporter ABCG.38) (AtABCG38) (Probable pleiotropic drug resistance protein 10)
ruditapes_c10142	transport	transport	P	ABC transporter G family member 35 (ABC transporter ABCG.35) (AtABCG35) (Probable pleiotropic drug resistance protein 7)
ruditapes_c10142	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 35 (ABC transporter ABCG.35) (AtABCG35) (Probable pleiotropic drug resistance protein 7)
ruditapes_c10771	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase CG17528 (EC 2.7.11.1) (Doublecortin-like and CAM kinase-like protein) (Protein Pk1)
ruditapes_c10771	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase CG17528 (EC 2.7.11.1) (Doublecortin-like and CAM kinase-like protein) (Protein Pk1)
ruditapes_c29200	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Homeobox protein extradenticle
ruditapes_c9428	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Homeobox protein extradenticle
ruditapes_c9428	"transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein extradenticle
ruditapes_c29200	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein extradenticle
ruditapes_c29200	"transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein extradenticle
ruditapes_c9428	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein extradenticle
ruditapes_c29200	peripheral nervous system development	developmental processes	P	Homeobox protein extradenticle
ruditapes_c9428	multicellular organismal development	developmental processes	P	Homeobox protein extradenticle
ruditapes_c9428	eye development	developmental processes	P	Homeobox protein extradenticle
ruditapes_c29200	multicellular organismal development	developmental processes	P	Homeobox protein extradenticle
ruditapes_c9428	peripheral nervous system development	developmental processes	P	Homeobox protein extradenticle
ruditapes_c29200	"protein import into nucleus, translocation"	transport	P	Homeobox protein extradenticle
ruditapes_c29200	eye development	developmental processes	P	Homeobox protein extradenticle
ruditapes_c9428	"protein import into nucleus, translocation"	transport	P	Homeobox protein extradenticle
ruditapes_s40305	establishment or maintenance of epithelial cell apical/basal polarity	cell organization and biogenesis	P	Moesin/ezrin/radixin homolog 1
ruditapes_c21818	intracellular protein transport	transport	P	Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)
ruditapes_c21818	protein transport	transport	P	Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)
ruditapes_c21818	vesicle-mediated transport	transport	P	Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)
ruditapes_c21818	transport	transport	P	Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)
ruditapes_c24270	regulation of actin filament polymerization	protein metabolism	P	Probable actin-related protein 2/3 complex subunit 2 (Arp2/3 complex 34 kDa subunit) (p34-ARC)
ruditapes_c24270	regulation of actin filament polymerization	cell organization and biogenesis	P	Probable actin-related protein 2/3 complex subunit 2 (Arp2/3 complex 34 kDa subunit) (p34-ARC)
ruditapes_s34047	biological_process	other biological processes	P	Protein real-time
ruditapes_s34047	transport	transport	P	Protein real-time
ruditapes2_c3700	RNA splicing	RNA metabolism	P	Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (CBP80) (NCBP 80 kDa subunit)
ruditapes2_c3700	RNA metabolic process	RNA metabolism	P	Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (CBP80) (NCBP 80 kDa subunit)
ruditapes2_c3700	gene silencing by RNA	other metabolic processes	P	Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (CBP80) (NCBP 80 kDa subunit)
ruditapes2_c3700	mRNA capping	RNA metabolism	P	Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (CBP80) (NCBP 80 kDa subunit)
ruditapes2_c3700	mRNA processing	RNA metabolism	P	Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (CBP80) (NCBP 80 kDa subunit)
ruditapes_c30752	Wnt receptor signaling pathway	signal transduction	P	Probable protein-cysteine N-palmitoyltransferase porcupine (EC 2.3.1.-)
ruditapes_c26968	oxidation reduction	other metabolic processes	P	Dehydrogenase/reductase SDR family protein 7-like (EC 1.1.-.-)
ruditapes_c26968	metabolic process	other metabolic processes	P	Dehydrogenase/reductase SDR family protein 7-like (EC 1.1.-.-)
ruditapes_c11913	regulation of cell cycle	cell cycle and proliferation	P	Cyclin-C
ruditapes_c11913	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	Cyclin-C
ruditapes_c11913	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	Cyclin-C
ruditapes_c11913	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclin-C
ruditapes_c11913	"transcription, DNA-dependent"	RNA metabolism	P	Cyclin-C
ruditapes_c3273	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c3273	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7)
ruditapes_c17882	oxidation reduction	other metabolic processes	P	"Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (MMSDH) (Malonate-semialdehyde dehydrogenase [acylating]) (EC 1.2.1.18) (EC 1.2.1.27)"
ruditapes_c17882	metabolic process	other metabolic processes	P	"Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (MMSDH) (Malonate-semialdehyde dehydrogenase [acylating]) (EC 1.2.1.18) (EC 1.2.1.27)"
ruditapes_c17943	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Regulator of telomere elongation helicase 1 homolog (EC 3.6.4.12)
ruditapes_c17943	DNA repair	stress response	P	Regulator of telomere elongation helicase 1 homolog (EC 3.6.4.12)
ruditapes_c17943	DNA repair	DNA metabolism	P	Regulator of telomere elongation helicase 1 homolog (EC 3.6.4.12)
ruditapes_c17943	response to DNA damage stimulus	stress response	P	Regulator of telomere elongation helicase 1 homolog (EC 3.6.4.12)
ruditapes_c17943	regulation of double-strand break repair via homologous recombination	stress response	P	Regulator of telomere elongation helicase 1 homolog (EC 3.6.4.12)
ruditapes_c17943	regulation of double-strand break repair via homologous recombination	DNA metabolism	P	Regulator of telomere elongation helicase 1 homolog (EC 3.6.4.12)
ruditapes_c8186	lipoate biosynthetic process	other metabolic processes	P	"Lipoyl synthase, apicoplast (EC 2.8.1.8) (Lipoate synthase) (LS) (Lip-syn) (Lipoic acid synthase)"
ruditapes_c8237	I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Protein NLRC3 (CARD15-like protein) (Caterpiller protein 16.2) (CLR16.2) (Nucleotide-binding oligomerization domain protein 3)
ruditapes_c8237	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Protein NLRC3 (CARD15-like protein) (Caterpiller protein 16.2) (CLR16.2) (Nucleotide-binding oligomerization domain protein 3)
ruditapes_c8237	T cell activation	other biological processes	P	Protein NLRC3 (CARD15-like protein) (Caterpiller protein 16.2) (CLR16.2) (Nucleotide-binding oligomerization domain protein 3)
ruditapes_c27167	transport	transport	P	Cation channel sperm-associated protein 4 (CatSper4)
ruditapes_c27167	multicellular organismal development	developmental processes	P	Cation channel sperm-associated protein 4 (CatSper4)
ruditapes_c27167	calcium ion transport	transport	P	Cation channel sperm-associated protein 4 (CatSper4)
ruditapes_c27167	transmembrane transport	transport	P	Cation channel sperm-associated protein 4 (CatSper4)
ruditapes_c27167	ion transport	transport	P	Cation channel sperm-associated protein 4 (CatSper4)
ruditapes_c27167	regulation of transmembrane ion transport	transport	P	Cation channel sperm-associated protein 4 (CatSper4)
ruditapes_c27167	cell differentiation	other biological processes	P	Cation channel sperm-associated protein 4 (CatSper4)
ruditapes_c27167	transmembrane calcium ion transport	transport	P	Cation channel sperm-associated protein 4 (CatSper4)
ruditapes_c27167	spermatogenesis	other biological processes	P	Cation channel sperm-associated protein 4 (CatSper4)
ruditapes_c26031	transport	transport	P	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)
ruditapes_c26031	transmembrane transport	transport	P	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)
ruditapes_s38505	proteolysis	protein metabolism	P	Serine protease 48 (EC 3.4.21.-) (Epidermis-specific serine protease-like protein)
ruditapes2_c4484	proteolysis	protein metabolism	P	Ovochymase-1 (EC 3.4.21.-)
ruditapes_lrc38177	proteolysis	protein metabolism	P	Ovochymase-2 (EC 3.4.21.-) (Oviductin)
ruditapes_c12701	proteolysis	protein metabolism	P	Ovochymase-2 (EC 3.4.21.-) (Oviductin)
ruditapes_c21850	translation	protein metabolism	P	ATP-dependent RNA helicase eIF4A (EC 3.6.4.13) (Eukaryotic initiation factor 4A) (eIF-4A) (Translation initiation factor 1)
ruditapes_c21850	translational initiation	protein metabolism	P	ATP-dependent RNA helicase eIF4A (EC 3.6.4.13) (Eukaryotic initiation factor 4A) (eIF-4A) (Translation initiation factor 1)
ruditapes_c30928	tRNA processing	RNA metabolism	P	Exportin-T (Exportin(tRNA)) (Karyopherin-beta) (tRNA exportin)
ruditapes_c30928	transport	transport	P	Exportin-T (Exportin(tRNA)) (Karyopherin-beta) (tRNA exportin)
ruditapes_c25409	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase)
ruditapes_c25409	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase)
ruditapes_c25409	protein ubiquitination	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 2 (PPIase) (EC 5.2.1.8) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) (Rotamase)
ruditapes_c15643	proteolysis	protein metabolism	P	COP9 signalosome complex subunit 5 (EC 3.4.-.-)
ruditapes_c22772	lipid catabolic process	other metabolic processes	P	Putative lipase atg-15 (EC 3.1.1.3) (Autophagy-related protein 15)
ruditapes_c22772	autophagy	other metabolic processes	P	Putative lipase atg-15 (EC 3.1.1.3) (Autophagy-related protein 15)
ruditapes_c22772	lipid metabolic process	other metabolic processes	P	Putative lipase atg-15 (EC 3.1.1.3) (Autophagy-related protein 15)
ruditapes2_c2373	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (SET domain-containing protein 2)"
ruditapes2_c2373	"transcription, DNA-dependent"	RNA metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (SET domain-containing protein 2)"
ruditapes2_c2373	histone lysine methylation	protein metabolism	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (SET domain-containing protein 2)"
ruditapes2_c2373	histone lysine methylation	cell organization and biogenesis	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (SET domain-containing protein 2)"
ruditapes2_c2373	methylation	other metabolic processes	P	"Histone-lysine N-methyltransferase, H3 lysine-36 specific (EC 2.1.1.43) (SET domain-containing protein 2)"
ruditapes_c17807	rRNA processing	RNA metabolism	P	Nucleolar protein 16
ruditapes_c17807	ribosome biogenesis	other biological processes	P	Nucleolar protein 16
ruditapes2_c2179	DNA repair	stress response	P	DNA repair protein rad-5 (EC 3.6.4.-)
ruditapes2_c2179	DNA repair	DNA metabolism	P	DNA repair protein rad-5 (EC 3.6.4.-)
ruditapes2_c2179	response to DNA damage stimulus	stress response	P	DNA repair protein rad-5 (EC 3.6.4.-)
ruditapes_c17501	RNA processing	RNA metabolism	P	mRNA 3'-end-processing protein rna-14
ruditapes_c17501	mRNA processing	RNA metabolism	P	mRNA 3'-end-processing protein rna-14
ruditapes_c18941	regulation of translation	protein metabolism	P	ATP-dependent RNA helicase dhh-1 (EC 3.6.4.13)
ruditapes_c18941	mRNA processing	RNA metabolism	P	ATP-dependent RNA helicase dhh-1 (EC 3.6.4.13)
ruditapes_c18941	mRNA transport	transport	P	ATP-dependent RNA helicase dhh-1 (EC 3.6.4.13)
ruditapes_c18941	transport	transport	P	ATP-dependent RNA helicase dhh-1 (EC 3.6.4.13)
ruditapes_c18314	ribosome biogenesis	other biological processes	P	ATP-dependent RNA helicase dbp-9 (EC 3.6.4.13)
ruditapes_c18314	rRNA processing	RNA metabolism	P	ATP-dependent RNA helicase dbp-9 (EC 3.6.4.13)
ruditapes_c18262	DNA repair	stress response	P	Histone acetyltransferase type B subunit 2
ruditapes_c18262	DNA repair	DNA metabolism	P	Histone acetyltransferase type B subunit 2
ruditapes_c18262	chromatin modification	cell organization and biogenesis	P	Histone acetyltransferase type B subunit 2
ruditapes_c18262	response to DNA damage stimulus	stress response	P	Histone acetyltransferase type B subunit 2
ruditapes_c13100	regulation of protein catabolic process	protein metabolism	P	26S proteasome regulatory subunit rpn-1
ruditapes_c13100	regulation of catalytic activity	other biological processes	P	26S proteasome regulatory subunit rpn-1
ruditapes_s36908	translation	protein metabolism	P	60S ribosomal protein L7
ruditapes_s38583	actin filament capping	protein metabolism	P	F-actin-capping protein subunit beta
ruditapes_s38583	actin filament capping	cell organization and biogenesis	P	F-actin-capping protein subunit beta
ruditapes_s38583	actin cytoskeleton organization	cell organization and biogenesis	P	F-actin-capping protein subunit beta
ruditapes_c27677	tRNA processing	RNA metabolism	P	tRNA (uracil-O(2)-)-methyltransferase (EC 2.1.1.211) (tRNA(M-2-U44)-methyltransferase)
ruditapes_c27677	methylation	other metabolic processes	P	tRNA (uracil-O(2)-)-methyltransferase (EC 2.1.1.211) (tRNA(M-2-U44)-methyltransferase)
ruditapes_c29502	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein erb-1 (Eukaryotic ribosome biogenesis protein 1)
ruditapes_c29502	regulation of cell cycle	cell cycle and proliferation	P	Ribosome biogenesis protein erb-1 (Eukaryotic ribosome biogenesis protein 1)
ruditapes_c29502	rRNA processing	RNA metabolism	P	Ribosome biogenesis protein erb-1 (Eukaryotic ribosome biogenesis protein 1)
ruditapes_c2384	ribosome biogenesis	other biological processes	P	Pescadillo homolog (Nucleolar protein 7 homolog)
ruditapes_c2384	rRNA processing	RNA metabolism	P	Pescadillo homolog (Nucleolar protein 7 homolog)
ruditapes_lrc16876	translation	protein metabolism	P	40S ribosomal protein S16
ruditapes_c7256	cell adhesion	cell adhesion	P	Fucolectin
ruditapes_c17188	"regulation of complement activation, lectin pathway"	stress response	P	Fucolectin
ruditapes_c17188	"regulation of complement activation, lectin pathway"	protein metabolism	P	Fucolectin
ruditapes_c17188	regulation of cellular defense response	stress response	P	Fucolectin
ruditapes_c17188	cell adhesion	cell adhesion	P	Fucolectin
ruditapes_c7256	regulation of innate immune response	stress response	P	Fucolectin
ruditapes_c7256	"regulation of complement activation, lectin pathway"	stress response	P	Fucolectin
ruditapes_c7256	"regulation of complement activation, lectin pathway"	protein metabolism	P	Fucolectin
ruditapes_c7256	regulation of cellular defense response	stress response	P	Fucolectin
ruditapes_c17188	regulation of innate immune response	stress response	P	Fucolectin
ruditapes_c5977	oxidation reduction	other metabolic processes	P	Arsenite oxidase subunit AioA (AOI) (EC 1.20.9.1) (Arsenite oxidase Mo-pterin subunit)
ruditapes_c35767	proteolysis	protein metabolism	P	Elastase-1 (EC 3.4.21.36)
ruditapes_c6207	biological_process	other biological processes	P	Leucine-rich repeat-containing protein 40
ruditapes_c21234	photoreceptor cell maintenance	other biological processes	P	ER membrane protein complex subunit 3 (Protein pob) (Transmembrane protein 111)
ruditapes_c21234	retina development in camera-type eye	developmental processes	P	ER membrane protein complex subunit 3 (Protein pob) (Transmembrane protein 111)
ruditapes_c7136	biological_process	other biological processes	P	Integrator complex subunit 6 (Int6) (Protein DDX26B)
ruditapes_c15353	biological_process	other biological processes	P	Integrator complex subunit 6 (Int6) (Protein DDX26B)
ruditapes_c5366	autophagy	other metabolic processes	P	Autophagy-related protein 13
ruditapes_c10683	cell communication	other biological processes	P	Gap junction Cx32.2 protein (Connexin-32.2)
ruditapes2_c594	positive regulation of TOR signaling pathway	signal transduction	P	Ragulator complex protein LAMTOR3-B (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 3-B) (Mitogen-activated protein kinase scaffold protein 1)
ruditapes2_c594	cellular protein localization	other biological processes	P	Ragulator complex protein LAMTOR3-B (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 3-B) (Mitogen-activated protein kinase scaffold protein 1)
ruditapes2_c117	positive regulation of TOR signaling pathway	signal transduction	P	Ragulator complex protein LAMTOR3-B (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 3-B) (Mitogen-activated protein kinase scaffold protein 1)
ruditapes2_c117	cellular protein localization	other biological processes	P	Ragulator complex protein LAMTOR3-B (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 3-B) (Mitogen-activated protein kinase scaffold protein 1)
ruditapes_c10591	lipid catabolic process	other metabolic processes	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c10591	metabolic process	other metabolic processes	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c10591	phospholipid catabolic process	other metabolic processes	P	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]
ruditapes_c6306	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit L (eIF3l) (Eukaryotic translation initiation factor 3 subunit 6-interacting protein) (Eukaryotic translation initiation factor 3 subunit E-interacting protein)
ruditapes_c21050	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit L (eIF3l) (Eukaryotic translation initiation factor 3 subunit 6-interacting protein) (Eukaryotic translation initiation factor 3 subunit E-interacting protein)
ruditapes_c21050	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit L (eIF3l) (Eukaryotic translation initiation factor 3 subunit 6-interacting protein) (Eukaryotic translation initiation factor 3 subunit E-interacting protein)
ruditapes_c6306	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit L (eIF3l) (Eukaryotic translation initiation factor 3 subunit 6-interacting protein) (Eukaryotic translation initiation factor 3 subunit E-interacting protein)
ruditapes_c23306	positive regulation of Rab GTPase activity	signal transduction	P	Small G protein signaling modulator 3 (RUN and TBC1 domain-containing protein 3)
ruditapes_c23306	regulation of Rab GTPase activity	signal transduction	P	Small G protein signaling modulator 3 (RUN and TBC1 domain-containing protein 3)
ruditapes_c11566	phosphorylation	other metabolic processes	P	Casein kinase I isoform delta-A (CKI-delta-A) (CKId-A) (EC 2.7.11.1) (Casein kinase I isoform delta-like)
ruditapes_c11566	Wnt receptor signaling pathway	signal transduction	P	Casein kinase I isoform delta-A (CKI-delta-A) (CKId-A) (EC 2.7.11.1) (Casein kinase I isoform delta-like)
ruditapes_c11566	protein amino acid phosphorylation	protein metabolism	P	Casein kinase I isoform delta-A (CKI-delta-A) (CKId-A) (EC 2.7.11.1) (Casein kinase I isoform delta-like)
ruditapes2_lrc4627	GTP catabolic process	other metabolic processes	P	Interferon-induced GTP-binding protein Mx1 (Interferon-inducible Mx1 protein)
ruditapes_c13776	lipid metabolic process	other metabolic processes	P	Cytosolic sulfotransferase 3 (EC 2.8.2.-) (SULT1 ST3)
ruditapes_c13776	catecholamine metabolic process	other metabolic processes	P	Cytosolic sulfotransferase 3 (EC 2.8.2.-) (SULT1 ST3)
ruditapes_c13776	xenobiotic metabolic process	other metabolic processes	P	Cytosolic sulfotransferase 3 (EC 2.8.2.-) (SULT1 ST3)
ruditapes_c13776	steroid metabolic process	other metabolic processes	P	Cytosolic sulfotransferase 3 (EC 2.8.2.-) (SULT1 ST3)
ruditapes_c17311	multicellular organismal development	developmental processes	P	Netrin receptor UNC5C (Protein unc-5 homolog 3) (cUNC-5H3) (Protein unc-5 homolog C)
ruditapes_c13588	multicellular organismal development	developmental processes	P	Netrin receptor UNC5C (Protein unc-5 homolog 3) (cUNC-5H3) (Protein unc-5 homolog C)
ruditapes_c16532	multicellular organismal development	developmental processes	P	Netrin receptor UNC5C (Protein unc-5 homolog 3) (cUNC-5H3) (Protein unc-5 homolog C)
ruditapes_c16532	signal transduction	signal transduction	P	Netrin receptor UNC5C (Protein unc-5 homolog 3) (cUNC-5H3) (Protein unc-5 homolog C)
ruditapes_c13588	signal transduction	signal transduction	P	Netrin receptor UNC5C (Protein unc-5 homolog 3) (cUNC-5H3) (Protein unc-5 homolog C)
ruditapes_c17311	signal transduction	signal transduction	P	Netrin receptor UNC5C (Protein unc-5 homolog 3) (cUNC-5H3) (Protein unc-5 homolog C)
ruditapes_c30619	transmembrane transport	transport	P	Sodium-coupled monocarboxylate transporter 2 (Electroneutral sodium monocarboxylate cotransporter) (zSMCTn) (Low-affinity sodium-lactate cotransporter) (Solute carrier family 5 member 12) (zSLC5A12)
ruditapes_c30619	transport	transport	P	Sodium-coupled monocarboxylate transporter 2 (Electroneutral sodium monocarboxylate cotransporter) (zSMCTn) (Low-affinity sodium-lactate cotransporter) (Solute carrier family 5 member 12) (zSLC5A12)
ruditapes_c30619	ion transport	transport	P	Sodium-coupled monocarboxylate transporter 2 (Electroneutral sodium monocarboxylate cotransporter) (zSMCTn) (Low-affinity sodium-lactate cotransporter) (Solute carrier family 5 member 12) (zSLC5A12)
ruditapes_c30619	sodium ion transport	transport	P	Sodium-coupled monocarboxylate transporter 2 (Electroneutral sodium monocarboxylate cotransporter) (zSMCTn) (Low-affinity sodium-lactate cotransporter) (Solute carrier family 5 member 12) (zSLC5A12)
ruditapes_c5364	translation	protein metabolism	P	60S ribosomal protein L15
ruditapes2_c1587	negative regulation of catalytic activity	other biological processes	P	Cysteine-rich motor neuron 1 protein (CRIM-1)
ruditapes2_c1587	notochord morphogenesis	developmental processes	P	Cysteine-rich motor neuron 1 protein (CRIM-1)
ruditapes2_c1587	somitogenesis	developmental processes	P	Cysteine-rich motor neuron 1 protein (CRIM-1)
ruditapes2_c1587	regulation of cell growth	other biological processes	P	Cysteine-rich motor neuron 1 protein (CRIM-1)
ruditapes2_c1587	blood vessel development	developmental processes	P	Cysteine-rich motor neuron 1 protein (CRIM-1)
ruditapes_c21368	ammonium transport	transport	P	Ammonium transporter Rh type C 2 (FRhcg2) (Rhesus blood group family type C glycoprotein 2) (RHCG-2) (Rh family type C glycoprotein 2) (Rh type C glycoprotein 2)
ruditapes_c21368	transport	transport	P	Ammonium transporter Rh type C 2 (FRhcg2) (Rhesus blood group family type C glycoprotein 2) (RHCG-2) (Rh family type C glycoprotein 2) (Rh type C glycoprotein 2)
ruditapes2_c2562	sodium ion transport	transport	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes2_c6529	sodium ion transport	transport	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes2_c3167	sodium ion transport	transport	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes2_c6529	multicellular organismal development	developmental processes	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes2_c2562	multicellular organismal development	developmental processes	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes2_c735	sodium ion transport	transport	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes2_c735	multicellular organismal development	developmental processes	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes_c13373	sodium ion transport	transport	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes_c24180	sodium ion transport	transport	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes_c3311	sodium ion transport	transport	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes2_c3167	multicellular organismal development	developmental processes	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes_c3311	multicellular organismal development	developmental processes	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes_c13373	multicellular organismal development	developmental processes	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes_c24180	multicellular organismal development	developmental processes	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes2_c809	multicellular organismal development	developmental processes	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes2_c809	sodium ion transport	transport	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes_c7096	multicellular organismal development	developmental processes	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes_c7096	sodium ion transport	transport	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes_lrc18814	Notch signaling pathway	signal transduction	P	Notch-regulated ankyrin repeat-containing protein B
ruditapes_lrc18814	regulation of cell-cell adhesion	cell adhesion	P	Notch-regulated ankyrin repeat-containing protein B
ruditapes_lrc18814	"transcription, DNA-dependent"	RNA metabolism	P	Notch-regulated ankyrin repeat-containing protein B
ruditapes_lrc18814	multicellular organismal development	developmental processes	P	Notch-regulated ankyrin repeat-containing protein B
ruditapes_lrc18814	blood vessel endothelial cell proliferation during sprouting angiogenesis	cell cycle and proliferation	P	Notch-regulated ankyrin repeat-containing protein B
ruditapes_lrc18814	blood vessel endothelial cell proliferation during sprouting angiogenesis	developmental processes	P	Notch-regulated ankyrin repeat-containing protein B
ruditapes_lrc18814	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Notch-regulated ankyrin repeat-containing protein B
ruditapes_lrc18814	sprouting angiogenesis	developmental processes	P	Notch-regulated ankyrin repeat-containing protein B
ruditapes_lrc18814	patterning of blood vessels	developmental processes	P	Notch-regulated ankyrin repeat-containing protein B
ruditapes_lrc13794	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit 2 (EC 2.7.7.6)
ruditapes_c22739	DNA topological change	DNA metabolism	P	DNA topoisomerase 1B (TopIB) (EC 5.99.1.2) (DNA topoisomerase type IB)
ruditapes_c18605	cyclic nucleotide biosynthetic process	other metabolic processes	P	Putative serine/threonine-protein kinase/receptor R831 (EC 2.7.11.1)
ruditapes_c18605	protein amino acid phosphorylation	protein metabolism	P	Putative serine/threonine-protein kinase/receptor R831 (EC 2.7.11.1)
ruditapes_c18605	phosphorylation	other metabolic processes	P	Putative serine/threonine-protein kinase/receptor R831 (EC 2.7.11.1)
ruditapes2_c1649	biological_process	other biological processes	P	Tigger transposable element-derived protein 3
ruditapes2_c1649	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Tigger transposable element-derived protein 3
ruditapes_c27567	regulation of glucose transport	transport	P	Free fatty acid receptor 4 (G-protein coupled receptor 120) (G-protein coupled receptor GT01) (Omega-3 fatty acid receptor 1)
ruditapes_c27567	hormone secretion	transport	P	Free fatty acid receptor 4 (G-protein coupled receptor 120) (G-protein coupled receptor GT01) (Omega-3 fatty acid receptor 1)
ruditapes_c27567	hormone secretion	cell-cell signaling	P	Free fatty acid receptor 4 (G-protein coupled receptor 120) (G-protein coupled receptor GT01) (Omega-3 fatty acid receptor 1)
ruditapes_c27567	signal transduction	signal transduction	P	Free fatty acid receptor 4 (G-protein coupled receptor 120) (G-protein coupled receptor GT01) (Omega-3 fatty acid receptor 1)
ruditapes_c27567	negative regulation of inflammatory response	stress response	P	Free fatty acid receptor 4 (G-protein coupled receptor 120) (G-protein coupled receptor GT01) (Omega-3 fatty acid receptor 1)
ruditapes_c27567	detection of chemical stimulus involved in sensory perception of taste	other biological processes	P	Free fatty acid receptor 4 (G-protein coupled receptor 120) (G-protein coupled receptor GT01) (Omega-3 fatty acid receptor 1)
ruditapes_c27567	negative regulation of cytokine secretion	transport	P	Free fatty acid receptor 4 (G-protein coupled receptor 120) (G-protein coupled receptor GT01) (Omega-3 fatty acid receptor 1)
ruditapes_c27567	G-protein coupled receptor protein signaling pathway	signal transduction	P	Free fatty acid receptor 4 (G-protein coupled receptor 120) (G-protein coupled receptor GT01) (Omega-3 fatty acid receptor 1)
ruditapes_c17599	positive regulation of cholesterol storage	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	cholesterol homeostasis	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	spermatogenesis	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	artery morphogenesis	developmental processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	cholesterol transport	transport	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	response to selenium ion	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	lipid metabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	fertilization	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	low-density lipoprotein particle remodeling	cell organization and biogenesis	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	low-density lipoprotein particle clearance	cell organization and biogenesis	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	cholesterol metabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	lipid transport	transport	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	in utero embryonic development	developmental processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	positive regulation of lipid storage	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	triglyceride catabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	nervous system development	developmental processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	response to lipopolysaccharide	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	lipoprotein metabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	response to organic substance	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	lipid catabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	transport	transport	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	lipoprotein transport	transport	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	lipoprotein catabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	post-embryonic development	developmental processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	response to virus	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	regulation of cholesterol biosynthetic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	lipoprotein biosynthetic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	positive regulation of foam cell differentiation	developmental processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	response to carbohydrate stimulus	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	steroid metabolic process	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	sperm motility	other biological processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c17599	triglyceride mobilization	other metabolic processes	P	Apolipoprotein B-100 (Apo B-100) [Cleaved into: Apolipoprotein B-48 (Apo B-48)]
ruditapes_c12622	metabolic process	other metabolic processes	P	Lipid phosphate phosphatase-related protein type 3 (EC 3.1.3.4) (Plasticity-related gene 2 protein) (PRG-2)
ruditapes2_c2777	transport	transport	P	Importin-8 (Imp8) (Ran-binding protein 8) (RanBP8)
ruditapes2_c2777	intracellular protein transport	transport	P	Importin-8 (Imp8) (Ran-binding protein 8) (RanBP8)
ruditapes2_c2777	protein transport	transport	P	Importin-8 (Imp8) (Ran-binding protein 8) (RanBP8)
ruditapes_c30250	negative regulation of angiogenesis	developmental processes	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	regulation of fibroblast growth factor receptor signaling pathway	signal transduction	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	dorsal/ventral pattern formation	developmental processes	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	neuroblast proliferation	cell cycle and proliferation	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	neuroblast proliferation	developmental processes	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	skeletal system morphogenesis	developmental processes	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	smoothened signaling pathway	signal transduction	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	signal transduction	signal transduction	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	negative regulation of smoothened signaling pathway	signal transduction	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	organ morphogenesis	developmental processes	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	carbohydrate metabolic process	other metabolic processes	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	negative regulation of signal transduction	signal transduction	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c30250	branching involved in lung morphogenesis	developmental processes	P	Hedgehog-interacting protein (HHIP) (HIP)
ruditapes_c24746	cell adhesion	cell adhesion	P	Angiogenic factor with G patch and FHA domains 1 (Angiogenic factor VG5Q) (mVG5Q)
ruditapes_c24746	cell differentiation	other biological processes	P	Angiogenic factor with G patch and FHA domains 1 (Angiogenic factor VG5Q) (mVG5Q)
ruditapes_c24746	positive regulation of angiogenesis	developmental processes	P	Angiogenic factor with G patch and FHA domains 1 (Angiogenic factor VG5Q) (mVG5Q)
ruditapes_c24746	angiogenesis	developmental processes	P	Angiogenic factor with G patch and FHA domains 1 (Angiogenic factor VG5Q) (mVG5Q)
ruditapes_c24746	positive regulation of endothelial cell proliferation	cell cycle and proliferation	P	Angiogenic factor with G patch and FHA domains 1 (Angiogenic factor VG5Q) (mVG5Q)
ruditapes_c24746	multicellular organismal development	developmental processes	P	Angiogenic factor with G patch and FHA domains 1 (Angiogenic factor VG5Q) (mVG5Q)
ruditapes_lrc23299	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes2_lrc6397	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes2_lrc5569	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_lrc36896	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_lrc33944	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes2_lrc4601	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_lrc34516	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_s38891	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_s36513	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes2_lrc3275	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_lrc33991	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_s37771	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_lrc33488	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes2_lrc2263	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_s37722	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_lrc32405	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_lrc38544	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes_s37800	biological_process	other biological processes	P	Synaptotagmin-16 (Synaptotagmin 14-like protein) (Synaptotagmin XIV-related protein)
ruditapes2_c5205	neuropeptide signaling pathway	signal transduction	P	Polycystic kidney disease protein 1-like 2 (PC1-like 2 protein) (Polycystin-1L2)
ruditapes_c21977	biological_process	other biological processes	P	Polycystic kidney disease protein 1-like 2 (PC1-like 2 protein) (Polycystin-1L2)
ruditapes2_c5205	biological_process	other biological processes	P	Polycystic kidney disease protein 1-like 2 (PC1-like 2 protein) (Polycystin-1L2)
ruditapes_c21977	neuropeptide signaling pathway	signal transduction	P	Polycystic kidney disease protein 1-like 2 (PC1-like 2 protein) (Polycystin-1L2)
ruditapes_lrc37974	lipid metabolic process	other metabolic processes	P	Serine incorporator 1 (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_lrc37974	positive regulation of transferase activity	other biological processes	P	Serine incorporator 1 (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_lrc37974	phospholipid biosynthetic process	other metabolic processes	P	Serine incorporator 1 (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_lrc37974	L-serine transport	transport	P	Serine incorporator 1 (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_lrc37974	phosphatidylserine metabolic process	other metabolic processes	P	Serine incorporator 1 (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_lrc37974	sphingolipid metabolic process	other metabolic processes	P	Serine incorporator 1 (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_c21684	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase 40 (EC 2.7.11.1) (Serine/threonine-protein kinase lyk4)
ruditapes_c21684	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase 40 (EC 2.7.11.1) (Serine/threonine-protein kinase lyk4)
ruditapes2_c2326	fatty acid metabolic process	other metabolic processes	P	Phosphatidate phosphatase LPIN3 (EC 3.1.3.4) (Lipin-3)
ruditapes2_c2326	lipid metabolic process	other metabolic processes	P	Phosphatidate phosphatase LPIN3 (EC 3.1.3.4) (Lipin-3)
ruditapes_lrc35190	biological_process	other biological processes	P	Mitochondrial inner membrane organizing system protein 1
ruditapes_lrc15856	biological_process	other biological processes	P	Protein FAM57B
ruditapes2_c1736	lipid biosynthetic process	other metabolic processes	P	Golgi resident protein GCP60 (Acyl-CoA-binding domain-containing protein 3) (DMT1-associated protein) (DAP) (Golgi complex-associated protein 1) (GOCAP1) (Golgi phosphoprotein 1) (GOLPH1)
ruditapes2_c1736	steroid biosynthetic process	other metabolic processes	P	Golgi resident protein GCP60 (Acyl-CoA-binding domain-containing protein 3) (DMT1-associated protein) (DAP) (Golgi complex-associated protein 1) (GOCAP1) (Golgi phosphoprotein 1) (GOLPH1)
ruditapes2_c1736	transport	transport	P	Golgi resident protein GCP60 (Acyl-CoA-binding domain-containing protein 3) (DMT1-associated protein) (DAP) (Golgi complex-associated protein 1) (GOCAP1) (Golgi phosphoprotein 1) (GOLPH1)
ruditapes2_c839	mRNA processing	RNA metabolism	P	Splicing factor U2AF 26 kDa subunit (Liver regeneration-related protein LRRG157/LRRG158) (U2 auxiliary factor 26) (U2 small nuclear RNA auxiliary factor 1-like protein 4)
ruditapes2_c839	RNA splicing	RNA metabolism	P	Splicing factor U2AF 26 kDa subunit (Liver regeneration-related protein LRRG157/LRRG158) (U2 auxiliary factor 26) (U2 small nuclear RNA auxiliary factor 1-like protein 4)
ruditapes_c31219	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c31219	"transcription, DNA-dependent"	RNA metabolism	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c31219	regulation of protein localization	other biological processes	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c31219	cell morphogenesis involved in neuron differentiation	developmental processes	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c31219	cell morphogenesis involved in neuron differentiation	cell organization and biogenesis	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c31219	regulation of cytoskeleton organization	cell organization and biogenesis	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c31219	central nervous system projection neuron axonogenesis	developmental processes	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c31219	central nervous system projection neuron axonogenesis	cell organization and biogenesis	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c31219	motor axon guidance	developmental processes	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c31219	motor axon guidance	cell organization and biogenesis	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c31219	branchiomotor neuron axon guidance	developmental processes	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c31219	branchiomotor neuron axon guidance	cell organization and biogenesis	P	Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Pam/highwire/rpm-1 protein) (Protein associated with Myc)
ruditapes_c23472	respiratory electron transport chain	other metabolic processes	P	Myb-binding protein 1A (Myb-binding protein of 160 kDa)
ruditapes_c23472	nucleocytoplasmic transport	transport	P	Myb-binding protein 1A (Myb-binding protein of 160 kDa)
ruditapes_c23472	"transcription, DNA-dependent"	RNA metabolism	P	Myb-binding protein 1A (Myb-binding protein of 160 kDa)
ruditapes_c23472	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Myb-binding protein 1A (Myb-binding protein of 160 kDa)
ruditapes_c23472	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Myb-binding protein 1A (Myb-binding protein of 160 kDa)
ruditapes_lrc15978	proteolysis	protein metabolism	P	Carboxypeptidase A1 (EC 3.4.17.1)
ruditapes_c29332	DNA replication	DNA metabolism	P	DnaJ homolog subfamily C member 2 (Gliosarcoma-related antigen MIDA1) (Zuotin-related factor 1)
ruditapes_c29332	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	DnaJ homolog subfamily C member 2 (Gliosarcoma-related antigen MIDA1) (Zuotin-related factor 1)
ruditapes_c29332	negative regulation of cell growth	other biological processes	P	DnaJ homolog subfamily C member 2 (Gliosarcoma-related antigen MIDA1) (Zuotin-related factor 1)
ruditapes_c29332	"regulation of transcription, DNA-dependent"	RNA metabolism	P	DnaJ homolog subfamily C member 2 (Gliosarcoma-related antigen MIDA1) (Zuotin-related factor 1)
ruditapes_c29332	chromatin modification	cell organization and biogenesis	P	DnaJ homolog subfamily C member 2 (Gliosarcoma-related antigen MIDA1) (Zuotin-related factor 1)
ruditapes_c29332	G2 phase of mitotic cell cycle	cell cycle and proliferation	P	DnaJ homolog subfamily C member 2 (Gliosarcoma-related antigen MIDA1) (Zuotin-related factor 1)
ruditapes_c29332	"transcription, DNA-dependent"	RNA metabolism	P	DnaJ homolog subfamily C member 2 (Gliosarcoma-related antigen MIDA1) (Zuotin-related factor 1)
ruditapes_c7531	signal transduction	signal transduction	P	RGM domain family member B (DRG11-responsive axonal guidance and outgrowth of neurite) (DRAGON)
ruditapes_c7531	cell adhesion	cell adhesion	P	RGM domain family member B (DRG11-responsive axonal guidance and outgrowth of neurite) (DRAGON)
ruditapes_c7531	BMP signaling pathway	signal transduction	P	RGM domain family member B (DRG11-responsive axonal guidance and outgrowth of neurite) (DRAGON)
ruditapes_c7531	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	RGM domain family member B (DRG11-responsive axonal guidance and outgrowth of neurite) (DRAGON)
ruditapes_c23105	negative regulation of cell death	death	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	single fertilization	other biological processes	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	inflammatory response	stress response	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	autophagy	other metabolic processes	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	cellular response to oxidative stress	stress response	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	regulation of inflammatory response	stress response	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	mitochondrion organization	cell organization and biogenesis	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	negative regulation of protein binding	other biological processes	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	proteolysis	protein metabolism	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	neuroprotection	death	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	cellular response to hydrogen peroxide	stress response	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	response to stress	stress response	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_c23105	protein stabilization	protein metabolism	P	Protein DJ-1 (EC 3.4.-.-) (Contraception-associated protein 1) (Parkinson disease protein 7 homolog)
ruditapes_lrc7026	biological_process	other biological processes	P	Transmembrane channel-like protein 4
ruditapes_c28564	keratinocyte proliferation	cell cycle and proliferation	P	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase reductase 9) (Short-chain dehydrogenase/reductase family 16C member 5)
ruditapes_c28564	oxidation reduction	other metabolic processes	P	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase reductase 9) (Short-chain dehydrogenase/reductase family 16C member 5)
ruditapes_c28564	metabolic process	other metabolic processes	P	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase reductase 9) (Short-chain dehydrogenase/reductase family 16C member 5)
ruditapes_c28564	retinal metabolic process	other metabolic processes	P	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase reductase 9) (Short-chain dehydrogenase/reductase family 16C member 5)
ruditapes_c28564	retinol metabolic process	other metabolic processes	P	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase reductase 9) (Short-chain dehydrogenase/reductase family 16C member 5)
ruditapes_c14665	biological_process	other biological processes	P	F-box only protein 10
ruditapes_lrc17956	biological_process	other biological processes	P	Ankyrin repeat and BTB/POZ domain-containing protein 2
ruditapes_c18356	nucleosome assembly	cell organization and biogenesis	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (CASK-interacting nucleosome assembly protein) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c18356	regulation of protein kinase activity	other metabolic processes	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (CASK-interacting nucleosome assembly protein) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c18356	negative regulation of cell growth	other biological processes	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (CASK-interacting nucleosome assembly protein) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c18356	"transcription, DNA-dependent"	RNA metabolism	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (CASK-interacting nucleosome assembly protein) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c18356	chromatin modification	cell organization and biogenesis	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (CASK-interacting nucleosome assembly protein) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c18356	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (CASK-interacting nucleosome assembly protein) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c18356	negative regulation of DNA replication	DNA metabolism	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (CASK-interacting nucleosome assembly protein) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c18356	cell cycle	cell cycle and proliferation	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (CASK-interacting nucleosome assembly protein) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c21828	insulin secretion	transport	P	Glucose-dependent insulinotropic receptor (G-protein coupled receptor 119)
ruditapes_c21828	insulin secretion	cell-cell signaling	P	Glucose-dependent insulinotropic receptor (G-protein coupled receptor 119)
ruditapes_c21828	G-protein coupled receptor protein signaling pathway	signal transduction	P	Glucose-dependent insulinotropic receptor (G-protein coupled receptor 119)
ruditapes_c21828	signal transduction	signal transduction	P	Glucose-dependent insulinotropic receptor (G-protein coupled receptor 119)
ruditapes_c3267	signal transduction	signal transduction	P	Probable G-protein coupled receptor 142
ruditapes_c3267	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 142
ruditapes_c28221	methylation	other metabolic processes	P	Putative methyltransferase NSUN6 (EC 2.1.1.-) (NOL1/NOP2/Sun domain family member 6)
ruditapes_c28221	biological_process	other biological processes	P	Putative methyltransferase NSUN6 (EC 2.1.1.-) (NOL1/NOP2/Sun domain family member 6)
ruditapes_c22272	neurogenesis	developmental processes	P	Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)
ruditapes_c22272	interkinetic nuclear migration	cell cycle and proliferation	P	Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)
ruditapes_c22272	interkinetic nuclear migration	developmental processes	P	Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)
ruditapes_c22272	regulation of microtubule-based process	other biological processes	P	Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)
ruditapes_c22272	spindle astral microtubule organization	cell cycle and proliferation	P	Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)
ruditapes_c22272	spindle astral microtubule organization	cell organization and biogenesis	P	Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)
ruditapes_c22272	microtubule cytoskeleton organization	cell organization and biogenesis	P	Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)
ruditapes_c22272	cell proliferation	cell cycle and proliferation	P	Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)
ruditapes_c22272	regulation of protein localization	other biological processes	P	Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)
ruditapes_c22272	cerebral cortex development	developmental processes	P	Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)
ruditapes_c16575	biological_process	other biological processes	P	Uncharacterized protein KIAA0195
ruditapes_c27655	response to virus	other biological processes	P	Interferon kappa (IFN-kappa)
ruditapes_c27655	cytokine-mediated signaling pathway	signal transduction	P	Interferon kappa (IFN-kappa)
ruditapes_c27655	defense response	stress response	P	Interferon kappa (IFN-kappa)
ruditapes_c27655	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Interferon kappa (IFN-kappa)
ruditapes_c17556	cell-cell adhesion	cell adhesion	P	Immunoglobulin superfamily member 5 (IgSF5) (Junctional adhesion molecule 4) (JAM-4)
ruditapes2_c1064	biological_process	other biological processes	P	RNA exonuclease 1 homolog (EC 3.1.-.-) (Transcription elongation factor B polypeptide 3-binding protein 1)
ruditapes_c21365	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c21365	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c21365	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)
ruditapes_c23913	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	CinA-like protein
ruditapes_c7448	glycine decarboxylation via glycine cleavage system	other metabolic processes	P	Glycine cleavage system H protein
ruditapes_c7448	glycine catabolic process	other metabolic processes	P	Glycine cleavage system H protein
ruditapes_lrc36123	translation	protein metabolism	P	30S ribosomal protein S15
ruditapes_c17306	protein folding	protein metabolism	P	10 kDa chaperonin (GroES protein) (Protein Cpn10)
ruditapes_c28477	cellular amino acid biosynthetic process	other metabolic processes	P	"Enolase-phosphatase E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane phosphatase)"
ruditapes_c28477	methionine salvage	other metabolic processes	P	"Enolase-phosphatase E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane phosphatase)"
ruditapes_c28477	methionine biosynthetic process	other metabolic processes	P	"Enolase-phosphatase E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane phosphatase)"
ruditapes_c20115	transport	transport	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c20115	ATP hydrolysis coupled proton transport	transport	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c20115	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c20115	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c20115	ATP metabolic process	other metabolic processes	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c20115	proton transport	transport	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c20115	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c20115	ion transport	transport	P	ATP synthase subunit alpha 1 (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha 1) (F-ATPase subunit alpha 1)
ruditapes_c21974	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c21974	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c21974	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c21974	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c28709	RNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c28709	tRNA processing	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c28709	biopolymer modification	other metabolic processes	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c28709	tRNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c24400	translation	protein metabolism	P	50S ribosomal protein L23
ruditapes2_c1513	cellular amino acid biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes2_c1513	aromatic amino acid family biosynthetic process	other metabolic processes	P	Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase)
ruditapes2_c2987	fatty acid biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes2_c2987	macromolecule biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes2_c2987	lipid biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes_c31217	regulation of cell shape	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c31217	peptidoglycan biosynthetic process	other metabolic processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c31217	cell division	other biological processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c31217	cell cycle	cell cycle and proliferation	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c31217	cell wall organization	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c23951	translation	protein metabolism	P	50S ribosomal protein L6
ruditapes_c36435	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c36435	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c36435	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c36435	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c36435	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c16847	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c16847	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c16847	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c16847	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c16847	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c16847	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_c25202	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c25202	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c26926	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c26926	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c30355	glycolysis	other metabolic processes	P	Phosphoglycerate kinase (EC 2.7.2.3)
ruditapes_c30355	phosphorylation	other metabolic processes	P	Phosphoglycerate kinase (EC 2.7.2.3)
ruditapes_lrc38094	metabolic process	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase 2 (Poly(P)/ATP NAD kinase 2) (EC 2.7.1.23)
ruditapes_lrc38094	phosphorylation	other metabolic processes	P	Probable inorganic polyphosphate/ATP-NAD kinase 2 (Poly(P)/ATP NAD kinase 2) (EC 2.7.1.23)
ruditapes_c25840	translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c25840	tRNA aminoacylation for protein translation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c25840	tRNA aminoacylation for protein translation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c25840	tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c25840	threonyl-tRNA aminoacylation	protein metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c25840	threonyl-tRNA aminoacylation	RNA metabolism	P	Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS)
ruditapes_c5235	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c5235	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c5235	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c5235	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c5235	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c26609	phytochromobilin biosynthetic process	other metabolic processes	P	Phycocyanobilin:ferredoxin oxidoreductase (EC 1.3.7.5)
ruditapes_c26609	oxidation reduction	other metabolic processes	P	Phycocyanobilin:ferredoxin oxidoreductase (EC 1.3.7.5)
ruditapes_c1572	isoprenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c1572	phosphorylation	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c1572	terpenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c23412	tRNA processing	RNA metabolism	P	Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO (EC 2.1.1.74) (Folate-dependent tRNA (uracil-5-)-methyltransferase) (Folate-dependent tRNA(M-5-U54)-methyltransferase)
ruditapes_c23412	methylation	other metabolic processes	P	Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO (EC 2.1.1.74) (Folate-dependent tRNA (uracil-5-)-methyltransferase) (Folate-dependent tRNA(M-5-U54)-methyltransferase)
ruditapes_c27398	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c27398	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c27398	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c27398	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c27398	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c26217	translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c26217	tRNA aminoacylation for protein translation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c26217	tRNA aminoacylation for protein translation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c26217	arginyl-tRNA aminoacylation	protein metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c26217	arginyl-tRNA aminoacylation	RNA metabolism	P	Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS)
ruditapes_c21868	cobalamin biosynthetic process	other metabolic processes	P	Putative cobalt-precorrin-6A synthase [deacetylating] (EC 2.1.1.-)
ruditapes2_c1916	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_c1916	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_c1916	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c9509	arginine biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c9509	ornithine metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c9509	cellular amino acid biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c9509	cellular amino acid metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes2_c2201	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes2_c2201	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes2_c2201	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c13393	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8)
ruditapes_c13393	oxidation reduction	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8)
ruditapes_c13393	diaminopimelate biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8)
ruditapes_c13393	lysine biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8)
ruditapes_c13393	cellular amino acid biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8)
ruditapes_c13320	nitrogen compound metabolic process	other metabolic processes	P	Urease accessory protein UreH
ruditapes2_c2730	isoprenoid biosynthetic process	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes2_c2730	oxidation reduction	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes2_c2730	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	other metabolic processes	P	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
ruditapes_c9008	fatty acid biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_c9008	lipid A biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_c9008	lipid biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_c30708	fatty acid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_c30708	phospholipid biosynthetic process	other metabolic processes	P	Phosphate acyltransferase (EC 2.3.1.n2) (Acyl-ACP phosphotransacylase) (Acyl-[acyl-carrier-protein]--phosphate acyltransferase) (Phosphate-acyl-ACP acyltransferase)
ruditapes_c12018	tRNA processing	RNA metabolism	P	Ribonuclease P protein component (RNase P protein) (RNaseP protein) (EC 3.1.26.5) (Protein C5)
ruditapes_lrc15530	regulation of DNA repair	stress response	P	Regulatory protein RecX
ruditapes_lrc15530	regulation of DNA repair	DNA metabolism	P	Regulatory protein RecX
ruditapes_c25655	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c25655	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c25655	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c25655	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c25655	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c8488	translation	protein metabolism	P	50S ribosomal protein L17
ruditapes_c15647	transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c15647	ion transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c15647	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c15647	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c15647	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c15647	proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c3911	protein transport	transport	P	Protein TolB
ruditapes_c3911	transport	transport	P	Protein TolB
ruditapes_c3768	protein import	transport	P	Protein TolB
ruditapes_c3768	protein transport	transport	P	Protein TolB
ruditapes_c3768	transport	transport	P	Protein TolB
ruditapes_c3911	protein import	transport	P	Protein TolB
ruditapes_c9257	translation	protein metabolism	P	Ribosome-recycling factor (RRF) (Ribosome-releasing factor)
ruditapes_c29879	one-carbon compound metabolic process	other metabolic processes	P	S-adenosylmethionine synthase (AdoMet synthase) (EC 2.5.1.6) (MAT) (Methionine adenosyltransferase)
ruditapes_c29879	S-adenosylmethionine biosynthetic process	other metabolic processes	P	S-adenosylmethionine synthase (AdoMet synthase) (EC 2.5.1.6) (MAT) (Methionine adenosyltransferase)
ruditapes_c6245	protein folding	protein metabolism	P	ATP-dependent Clp protease ATP-binding subunit ClpX
ruditapes_c24167	protein folding	protein metabolism	P	ATP-dependent Clp protease ATP-binding subunit ClpX
ruditapes_c7477	cellular amino acid biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c12822	cellular amino acid biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c12822	methionine biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c7477	methionine biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c12822	methylation	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c7477	methylation	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes2_lrc4772	phosphorylation	other metabolic processes	P	Guanylate kinase (EC 2.7.4.8) (GMP kinase)
ruditapes2_lrc4772	purine nucleotide metabolic process	other metabolic processes	P	Guanylate kinase (EC 2.7.4.8) (GMP kinase)
ruditapes_c34524	translation	protein metabolism	P	50S ribosomal protein L7/L12
ruditapes_c38287	translation	protein metabolism	P	50S ribosomal protein L7/L12
ruditapes_c11955	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c9356	diaminopimelate biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c9356	lysine biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c9356	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c9356	cellular amino acid biosynthetic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c9356	metabolic process	other metabolic processes	P	4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7)
ruditapes_c15064	transport	transport	P	Type IV secretion system protein PtlC (Pertussis toxin liberation protein C)
ruditapes_c21480	glutathione biosynthetic process	other metabolic processes	P	Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-ECS) (GCS) (Gamma-glutamylcysteine synthetase)
ruditapes_c30718	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c30718	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT)"
ruditapes_c8411	oxidation reduction	other metabolic processes	P	Ectoine hydroxylase (EC 1.17.-.-)
ruditapes_c19400	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c23498	tRNA processing	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c23498	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c23498	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c23498	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_lrc26785	transport	transport	P	Outer-membrane lipoprotein LolB
ruditapes_lrc26785	protein transport	transport	P	Outer-membrane lipoprotein LolB
ruditapes_c5010	transport	transport	P	Lactose permease (Lactose transport protein) (Lactose transporter) (Lactose-proton symporter) [Includes: Putative phosphotransferase enzyme IIA component (EC 2.7.1.-) (Putative PTS system EIIA component)]
ruditapes_c5010	phosphoenolpyruvate-dependent sugar phosphotransferase system	signal transduction	P	Lactose permease (Lactose transport protein) (Lactose transporter) (Lactose-proton symporter) [Includes: Putative phosphotransferase enzyme IIA component (EC 2.7.1.-) (Putative PTS system EIIA component)]
ruditapes_c5010	phosphoenolpyruvate-dependent sugar phosphotransferase system	transport	P	Lactose permease (Lactose transport protein) (Lactose transporter) (Lactose-proton symporter) [Includes: Putative phosphotransferase enzyme IIA component (EC 2.7.1.-) (Putative PTS system EIIA component)]
ruditapes_c5010	carbohydrate transport	transport	P	Lactose permease (Lactose transport protein) (Lactose transporter) (Lactose-proton symporter) [Includes: Putative phosphotransferase enzyme IIA component (EC 2.7.1.-) (Putative PTS system EIIA component)]
ruditapes_c5010	sodium ion transport	transport	P	Lactose permease (Lactose transport protein) (Lactose transporter) (Lactose-proton symporter) [Includes: Putative phosphotransferase enzyme IIA component (EC 2.7.1.-) (Putative PTS system EIIA component)]
ruditapes_c5010	phosphorylation	other metabolic processes	P	Lactose permease (Lactose transport protein) (Lactose transporter) (Lactose-proton symporter) [Includes: Putative phosphotransferase enzyme IIA component (EC 2.7.1.-) (Putative PTS system EIIA component)]
ruditapes_lrc25591	oxidation reduction	other metabolic processes	P	Flavohemoprotein (Flavohemoglobin) (Hemoglobin-like protein) (Nitric oxide dioxygenase) (NO oxygenase) (NOD) (EC 1.14.12.17)
ruditapes_lrc25591	oxygen transport	transport	P	Flavohemoprotein (Flavohemoglobin) (Hemoglobin-like protein) (Nitric oxide dioxygenase) (NO oxygenase) (NOD) (EC 1.14.12.17)
ruditapes_lrc25591	transport	transport	P	Flavohemoprotein (Flavohemoglobin) (Hemoglobin-like protein) (Nitric oxide dioxygenase) (NO oxygenase) (NOD) (EC 1.14.12.17)
ruditapes_lrc25591	response to nitrosative stress	stress response	P	Flavohemoprotein (Flavohemoglobin) (Hemoglobin-like protein) (Nitric oxide dioxygenase) (NO oxygenase) (NOD) (EC 1.14.12.17)
ruditapes_lrc25591	response to toxin	other biological processes	P	Flavohemoprotein (Flavohemoglobin) (Hemoglobin-like protein) (Nitric oxide dioxygenase) (NO oxygenase) (NOD) (EC 1.14.12.17)
ruditapes_lrc18858	transmembrane transport	transport	P	Probable metal-nicotianamine transporter YSL11 (Protein YELLOW STRIPE LIKE 11) (OsYSL11)
ruditapes_lrc18858	transport	transport	P	Probable metal-nicotianamine transporter YSL11 (Protein YELLOW STRIPE LIKE 11) (OsYSL11)
ruditapes_c1186	"regulation of transcription, DNA-dependent"	RNA metabolism	P	PHD finger protein MALE MEIOCYTE DEATH 1
ruditapes_c1186	male meiosis chromosome segregation	cell cycle and proliferation	P	PHD finger protein MALE MEIOCYTE DEATH 1
ruditapes_c1186	pollen sperm cell differentiation	other biological processes	P	PHD finger protein MALE MEIOCYTE DEATH 1
ruditapes_c1186	"transcription, DNA-dependent"	RNA metabolism	P	PHD finger protein MALE MEIOCYTE DEATH 1
ruditapes2_c1431	heat acclimation	stress response	P	F-box protein At1g11270
ruditapes_c14568	"transcription, DNA-dependent"	RNA metabolism	P	Agamous-like MADS-box protein AGL93
ruditapes_c14568	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Agamous-like MADS-box protein AGL93
ruditapes_c6574	protein thiol-disulfide exchange	protein metabolism	P	Endoplasmic oxidoreductin-2 (EC 1.8.4.-)
ruditapes_c6574	electron transport chain	other metabolic processes	P	Endoplasmic oxidoreductin-2 (EC 1.8.4.-)
ruditapes_c6574	transport	transport	P	Endoplasmic oxidoreductin-2 (EC 1.8.4.-)
ruditapes_c6574	oxidation reduction	other metabolic processes	P	Endoplasmic oxidoreductin-2 (EC 1.8.4.-)
ruditapes_c20025	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 21 (ABC transporter ABCG.21) (AtABCG21) (White-brown complex homolog protein 21) (AtWBC21)
ruditapes_c20025	transport	transport	P	ABC transporter G family member 21 (ABC transporter ABCG.21) (AtABCG21) (White-brown complex homolog protein 21) (AtWBC21)
ruditapes_c10139	carbohydrate metabolic process	other metabolic processes	P	Beta-galactosidase 14 (Lactase 14) (EC 3.2.1.23)
ruditapes_c10139	metabolic process	other metabolic processes	P	Beta-galactosidase 14 (Lactase 14) (EC 3.2.1.23)
ruditapes2_c2235	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 16 (EC 2.7.11.1)
ruditapes_c972	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 16 (EC 2.7.11.1)
ruditapes_c972	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 16 (EC 2.7.11.1)
ruditapes2_c2235	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 16 (EC 2.7.11.1)
ruditapes_c9932	carbohydrate metabolic process	other metabolic processes	P	Beta-glucosidase 12 (Os4bglu12) (EC 3.2.1.21)
ruditapes_c9932	pollen tube growth	developmental processes	P	Beta-glucosidase 12 (Os4bglu12) (EC 3.2.1.21)
ruditapes_c9932	metabolic process	other metabolic processes	P	Beta-glucosidase 12 (Os4bglu12) (EC 3.2.1.21)
ruditapes_c18017	sucrose metabolic process	other metabolic processes	P	Sucrose synthase 7 (OsSUS7) (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 7)
ruditapes_c18017	biosynthetic process	other metabolic processes	P	Sucrose synthase 7 (OsSUS7) (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 7)
ruditapes_c18520	transmembrane transport	transport	P	Probable metal-nicotianamine transporter YSL6 (Protein YELLOW STRIPE LIKE 6) (OsYSL6)
ruditapes_c18520	transport	transport	P	Probable metal-nicotianamine transporter YSL6 (Protein YELLOW STRIPE LIKE 6) (OsYSL6)
ruditapes_s36976	oxidation reduction	other metabolic processes	P	"7-hydroxymethyl chlorophyll a reductase, chloroplastic (EC 1.17.7.2)"
ruditapes_c20174	oxidation reduction	other metabolic processes	P	Putative lipoxygenase 5 (EC 1.13.11.12)
ruditapes_c20174	lipid biosynthetic process	other metabolic processes	P	Putative lipoxygenase 5 (EC 1.13.11.12)
ruditapes_c20174	oxylipin biosynthetic process	other metabolic processes	P	Putative lipoxygenase 5 (EC 1.13.11.12)
ruditapes_c20174	fatty acid biosynthetic process	other metabolic processes	P	Putative lipoxygenase 5 (EC 1.13.11.12)
ruditapes_c25256	response to high light intensity	other biological processes	P	Probable phosphoinositide phosphatase SAC9 (AtSAC9) (EC 3.1.3.-) (Protein SUPPRESSOR OF ACTIN 9) (SAC domain protein 9)
ruditapes_c25256	phosphoinositide-mediated signaling	signal transduction	P	Probable phosphoinositide phosphatase SAC9 (AtSAC9) (EC 3.1.3.-) (Protein SUPPRESSOR OF ACTIN 9) (SAC domain protein 9)
ruditapes_c25256	phosphatidylinositol metabolic process	other metabolic processes	P	Probable phosphoinositide phosphatase SAC9 (AtSAC9) (EC 3.1.3.-) (Protein SUPPRESSOR OF ACTIN 9) (SAC domain protein 9)
ruditapes_c25256	response to cold	stress response	P	Probable phosphoinositide phosphatase SAC9 (AtSAC9) (EC 3.1.3.-) (Protein SUPPRESSOR OF ACTIN 9) (SAC domain protein 9)
ruditapes_c25256	response to osmotic stress	stress response	P	Probable phosphoinositide phosphatase SAC9 (AtSAC9) (EC 3.1.3.-) (Protein SUPPRESSOR OF ACTIN 9) (SAC domain protein 9)
ruditapes2_c833	cell redox homeostasis	other biological processes	P	Probable nucleoredoxin 1-1 (OsNrx1-1) (EC 1.8.1.8)
ruditapes2_c833	oxidation reduction	other metabolic processes	P	Probable nucleoredoxin 1-1 (OsNrx1-1) (EC 1.8.1.8)
ruditapes_lrc16923	transport	transport	P	Probable aquaporin PIP2-8 (OsPIP2;8) (Plasma membrane intrinsic protein 2-8)
ruditapes_lrc16923	transmembrane transport	transport	P	Probable aquaporin PIP2-8 (OsPIP2;8) (Plasma membrane intrinsic protein 2-8)
ruditapes_lrc16923	water transport	transport	P	Probable aquaporin PIP2-8 (OsPIP2;8) (Plasma membrane intrinsic protein 2-8)
ruditapes_c19604	gene silencing	other metabolic processes	P	DNA (cytosine-5)-methyltransferase 1A (OsMET1a) (EC 2.1.1.37) (DNA methyltransferase 1-1) (OsMET1-1)
ruditapes_c20337	gene silencing	other metabolic processes	P	DNA (cytosine-5)-methyltransferase 1A (OsMET1a) (EC 2.1.1.37) (DNA methyltransferase 1-1) (OsMET1-1)
ruditapes_c20337	DNA methylation	DNA metabolism	P	DNA (cytosine-5)-methyltransferase 1A (OsMET1a) (EC 2.1.1.37) (DNA methyltransferase 1-1) (OsMET1-1)
ruditapes_c19604	DNA methylation	DNA metabolism	P	DNA (cytosine-5)-methyltransferase 1A (OsMET1a) (EC 2.1.1.37) (DNA methyltransferase 1-1) (OsMET1-1)
ruditapes_c19604	methylation	other metabolic processes	P	DNA (cytosine-5)-methyltransferase 1A (OsMET1a) (EC 2.1.1.37) (DNA methyltransferase 1-1) (OsMET1-1)
ruditapes_c20337	maintenance of DNA methylation	DNA metabolism	P	DNA (cytosine-5)-methyltransferase 1A (OsMET1a) (EC 2.1.1.37) (DNA methyltransferase 1-1) (OsMET1-1)
ruditapes_c19604	DNA methylation on cytosine within a CG sequence	DNA metabolism	P	DNA (cytosine-5)-methyltransferase 1A (OsMET1a) (EC 2.1.1.37) (DNA methyltransferase 1-1) (OsMET1-1)
ruditapes_c20337	methylation	other metabolic processes	P	DNA (cytosine-5)-methyltransferase 1A (OsMET1a) (EC 2.1.1.37) (DNA methyltransferase 1-1) (OsMET1-1)
ruditapes_c20337	DNA methylation on cytosine within a CG sequence	DNA metabolism	P	DNA (cytosine-5)-methyltransferase 1A (OsMET1a) (EC 2.1.1.37) (DNA methyltransferase 1-1) (OsMET1-1)
ruditapes_c19604	maintenance of DNA methylation	DNA metabolism	P	DNA (cytosine-5)-methyltransferase 1A (OsMET1a) (EC 2.1.1.37) (DNA methyltransferase 1-1) (OsMET1-1)
ruditapes_c11405	chloroplast RNA processing	RNA metabolism	P	"Pentatricopeptide repeat-containing protein At3g57430, chloroplastic"
ruditapes_lrc12443	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_lrc12443	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c4704	DNA repair	stress response	P	Transcriptional regulator ATRX (EC 3.6.4.12) (ATP-dependent helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP)
ruditapes_c4704	DNA repair	DNA metabolism	P	Transcriptional regulator ATRX (EC 3.6.4.12) (ATP-dependent helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP)
ruditapes_c4704	response to DNA damage stimulus	stress response	P	Transcriptional regulator ATRX (EC 3.6.4.12) (ATP-dependent helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP)
ruditapes_c12725	translation	protein metabolism	P	"39S ribosomal protein L12, mitochondrial (L12mt) (MRP-L12)"
ruditapes_c9146	positive regulation of cell growth	other biological processes	P	Exosome complex component RRP41 (Exosome component 4) (Ribosomal RNA-processing protein 41)
ruditapes_c9146	DNA deamination	DNA metabolism	P	Exosome complex component RRP41 (Exosome component 4) (Ribosomal RNA-processing protein 41)
ruditapes_c9146	maturation of 5.8S rRNA	RNA metabolism	P	Exosome complex component RRP41 (Exosome component 4) (Ribosomal RNA-processing protein 41)
ruditapes_c9146	nuclear-transcribed mRNA catabolic process	RNA metabolism	P	Exosome complex component RRP41 (Exosome component 4) (Ribosomal RNA-processing protein 41)
ruditapes_c9146	RNA processing	RNA metabolism	P	Exosome complex component RRP41 (Exosome component 4) (Ribosomal RNA-processing protein 41)
ruditapes_c9146	rRNA processing	RNA metabolism	P	Exosome complex component RRP41 (Exosome component 4) (Ribosomal RNA-processing protein 41)
ruditapes2_lrc3365	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc33233	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc36800	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc32670	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc36800	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_c3823	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3758	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc33600	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3560	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc35836	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc35836	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_c4868	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_c3823	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c3064	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_c4868	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3365	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc35836	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc33600	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3758	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc33600	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc32670	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_c4868	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3560	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_c3823	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c5034	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc13745	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc36800	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c3064	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc33233	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc32670	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc36800	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c5034	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c5034	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3560	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc33233	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3365	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc32670	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c3064	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3365	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_c4868	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3758	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc33233	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc33233	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc35836	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_c4868	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c3064	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc13745	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc35836	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc13745	tricarboxylic acid cycle	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3560	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc13745	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3758	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c5034	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc36800	cellular carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c5034	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3560	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc33600	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3758	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_c3823	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c3064	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc13745	carbohydrate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc32670	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_lrc33600	oxidation reduction	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_c3823	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes2_lrc3365	malate metabolic process	other metabolic processes	P	"Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)"
ruditapes_c1583	cell wall macromolecule catabolic process	other metabolic processes	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1)"
ruditapes_c1583	metabolic process	other metabolic processes	P	"Lysozyme 1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase 1)"
ruditapes_c26766	oxygen transport	transport	P	Arylphorin
ruditapes_c26766	transport	transport	P	Arylphorin
ruditapes_c31249	mature ribosome assembly	cell organization and biogenesis	P	Elongation factor Tu GTP-binding domain-containing protein 1 (Elongation factor-like 1) (Protein FAM42A)
ruditapes_c31249	translational elongation	protein metabolism	P	Elongation factor Tu GTP-binding domain-containing protein 1 (Elongation factor-like 1) (Protein FAM42A)
ruditapes_c31249	GTP catabolic process	other metabolic processes	P	Elongation factor Tu GTP-binding domain-containing protein 1 (Elongation factor-like 1) (Protein FAM42A)
ruditapes_c31249	ribosome biogenesis	other biological processes	P	Elongation factor Tu GTP-binding domain-containing protein 1 (Elongation factor-like 1) (Protein FAM42A)
ruditapes_c31249	translation	protein metabolism	P	Elongation factor Tu GTP-binding domain-containing protein 1 (Elongation factor-like 1) (Protein FAM42A)
ruditapes_s32897	DNA repair	stress response	P	Probable helicase senataxin (EC 3.6.4.-) (Amyotrophic lateral sclerosis 4 protein) (SEN1 homolog)
ruditapes_s32897	DNA repair	DNA metabolism	P	Probable helicase senataxin (EC 3.6.4.-) (Amyotrophic lateral sclerosis 4 protein) (SEN1 homolog)
ruditapes_s32897	RNA processing	RNA metabolism	P	Probable helicase senataxin (EC 3.6.4.-) (Amyotrophic lateral sclerosis 4 protein) (SEN1 homolog)
ruditapes_s32897	double-strand break repair	stress response	P	Probable helicase senataxin (EC 3.6.4.-) (Amyotrophic lateral sclerosis 4 protein) (SEN1 homolog)
ruditapes_s32897	double-strand break repair	DNA metabolism	P	Probable helicase senataxin (EC 3.6.4.-) (Amyotrophic lateral sclerosis 4 protein) (SEN1 homolog)
ruditapes_s32897	cell death	death	P	Probable helicase senataxin (EC 3.6.4.-) (Amyotrophic lateral sclerosis 4 protein) (SEN1 homolog)
ruditapes_s32897	response to DNA damage stimulus	stress response	P	Probable helicase senataxin (EC 3.6.4.-) (Amyotrophic lateral sclerosis 4 protein) (SEN1 homolog)
ruditapes_c7446	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 551 (Zinc finger protein KOX23)
ruditapes_c7446	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 551 (Zinc finger protein KOX23)
ruditapes_lrc31174	signal transduction	signal transduction	P	Olfactory receptor 2W3 (Olfactory receptor 2W8) (Olfactory receptor OR1-49)
ruditapes_lrc31174	response to stimulus	other biological processes	P	Olfactory receptor 2W3 (Olfactory receptor 2W8) (Olfactory receptor OR1-49)
ruditapes_lrc31174	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 2W3 (Olfactory receptor 2W8) (Olfactory receptor OR1-49)
ruditapes_lrc31174	sensory perception of smell	other biological processes	P	Olfactory receptor 2W3 (Olfactory receptor 2W8) (Olfactory receptor OR1-49)
ruditapes_lrc31174	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 2W3 (Olfactory receptor 2W8) (Olfactory receptor OR1-49)
ruditapes_c25982	ion transport	transport	P	Polycystic kidney disease protein 1-like 2 (PC1-like 2 protein) (Polycystin-1L2)
ruditapes_c25982	transport	transport	P	Polycystic kidney disease protein 1-like 2 (PC1-like 2 protein) (Polycystin-1L2)
ruditapes_c25982	neuropeptide signaling pathway	signal transduction	P	Polycystic kidney disease protein 1-like 2 (PC1-like 2 protein) (Polycystin-1L2)
ruditapes_c30371	oxidation reduction	other metabolic processes	P	Cytochrome P450 2U1 (EC 1.14.14.1)
ruditapes_c30371	xenobiotic metabolic process	other metabolic processes	P	Cytochrome P450 2U1 (EC 1.14.14.1)
ruditapes_c11429	oxidation reduction	other metabolic processes	P	Cytochrome P450 2U1 (EC 1.14.14.1)
ruditapes_c11429	xenobiotic metabolic process	other metabolic processes	P	Cytochrome P450 2U1 (EC 1.14.14.1)
ruditapes_c13557	spinal cord motor neuron differentiation	developmental processes	P	MAM domain-containing glycosylphosphatidylinositol anchor protein 2 (MAM domain-containing protein 1)
ruditapes_c12341	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 homolog
ruditapes_c10203	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 homolog
ruditapes_c3296	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 homolog
ruditapes_c14436	vitelline membrane formation	cell organization and biogenesis	P	Vitelline membrane outer layer protein 1 homolog
ruditapes_c32686	post-translational protein modification	protein metabolism	P	Mucin-19 (MUC-19)
ruditapes_lrc35822	O-glycan processing	protein metabolism	P	Mucin-19 (MUC-19)
ruditapes_c35754	O-glycan processing	protein metabolism	P	Mucin-19 (MUC-19)
ruditapes_c32686	O-glycan processing	protein metabolism	P	Mucin-19 (MUC-19)
ruditapes_c35754	post-translational protein modification	protein metabolism	P	Mucin-19 (MUC-19)
ruditapes_lrc35822	cellular protein metabolic process	protein metabolism	P	Mucin-19 (MUC-19)
ruditapes_lrc35822	post-translational protein modification	protein metabolism	P	Mucin-19 (MUC-19)
ruditapes_c32686	cellular protein metabolic process	protein metabolism	P	Mucin-19 (MUC-19)
ruditapes_c35754	cellular protein metabolic process	protein metabolism	P	Mucin-19 (MUC-19)
ruditapes_s37843	nerve growth factor receptor signaling pathway	signal transduction	P	"FYVE, RhoGEF and PH domain-containing protein 2 (Zinc finger FYVE domain-containing protein 4)"
ruditapes_s37843	regulation of Cdc42 GTPase activity	signal transduction	P	"FYVE, RhoGEF and PH domain-containing protein 2 (Zinc finger FYVE domain-containing protein 4)"
ruditapes_s37843	cytoskeleton organization	cell organization and biogenesis	P	"FYVE, RhoGEF and PH domain-containing protein 2 (Zinc finger FYVE domain-containing protein 4)"
ruditapes_s37843	regulation of Rho protein signal transduction	signal transduction	P	"FYVE, RhoGEF and PH domain-containing protein 2 (Zinc finger FYVE domain-containing protein 4)"
ruditapes_s37843	filopodium assembly	cell organization and biogenesis	P	"FYVE, RhoGEF and PH domain-containing protein 2 (Zinc finger FYVE domain-containing protein 4)"
ruditapes_s37843	induction of apoptosis by extracellular signals	death	P	"FYVE, RhoGEF and PH domain-containing protein 2 (Zinc finger FYVE domain-containing protein 4)"
ruditapes_s37843	regulation of small GTPase mediated signal transduction	signal transduction	P	"FYVE, RhoGEF and PH domain-containing protein 2 (Zinc finger FYVE domain-containing protein 4)"
ruditapes_s37843	regulation of cell shape	cell organization and biogenesis	P	"FYVE, RhoGEF and PH domain-containing protein 2 (Zinc finger FYVE domain-containing protein 4)"
ruditapes_s37843	apoptosis	death	P	"FYVE, RhoGEF and PH domain-containing protein 2 (Zinc finger FYVE domain-containing protein 4)"
ruditapes_s37843	actin cytoskeleton organization	cell organization and biogenesis	P	"FYVE, RhoGEF and PH domain-containing protein 2 (Zinc finger FYVE domain-containing protein 4)"
ruditapes_s37843	small GTPase mediated signal transduction	signal transduction	P	"FYVE, RhoGEF and PH domain-containing protein 2 (Zinc finger FYVE domain-containing protein 4)"
ruditapes_c9419	receptor-mediated endocytosis	transport	P	Rab9 effector protein with kelch motifs (40 kDa Rab9 effector protein) (p40)
ruditapes_c9419	receptor-mediated endocytosis	cell organization and biogenesis	P	Rab9 effector protein with kelch motifs (40 kDa Rab9 effector protein) (p40)
ruditapes_c9419	vesicle docking during exocytosis	transport	P	Rab9 effector protein with kelch motifs (40 kDa Rab9 effector protein) (p40)
ruditapes_c21445	cell differentiation	other biological processes	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c21445	DNA repair	stress response	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c21445	DNA repair	DNA metabolism	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c21445	protein modification process	protein metabolism	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c21445	protein monoubiquitination	protein metabolism	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c21445	base-excision repair	stress response	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c21445	base-excision repair	DNA metabolism	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c21445	response to DNA damage stimulus	stress response	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c21445	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c21445	protein polyubiquitination	protein metabolism	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c21445	histone ubiquitination	protein metabolism	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c21445	histone ubiquitination	cell organization and biogenesis	P	"E3 ubiquitin-protein ligase HUWE1 (EC 6.3.2.-) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)"
ruditapes_c11113	translation	protein metabolism	P	"39S ribosomal protein L55, mitochondrial (L55mt) (MRP-L55)"
ruditapes2_c1415	translation	protein metabolism	P	"39S ribosomal protein L55, mitochondrial (L55mt) (MRP-L55)"
ruditapes_c4758	protein localization	other biological processes	P	Vacuolar protein sorting-associated protein 13B (Cohen syndrome protein 1)
ruditapes_c4758	protein transport	transport	P	Vacuolar protein sorting-associated protein 13B (Cohen syndrome protein 1)
ruditapes_c4758	transport	transport	P	Vacuolar protein sorting-associated protein 13B (Cohen syndrome protein 1)
ruditapes_lrc38032	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc38032	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc38032	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc38032	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc38032	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc38032	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_c13381	G-protein coupled receptor protein signaling pathway	signal transduction	P	Follicle-stimulating hormone receptor (FSH-R) (Follitropin receptor)
ruditapes_c13381	follicle-stimulating hormone signaling pathway	signal transduction	P	Follicle-stimulating hormone receptor (FSH-R) (Follitropin receptor)
ruditapes_c13381	follicle-stimulating hormone signaling pathway	developmental processes	P	Follicle-stimulating hormone receptor (FSH-R) (Follitropin receptor)
ruditapes_c13381	signal transduction	signal transduction	P	Follicle-stimulating hormone receptor (FSH-R) (Follitropin receptor)
ruditapes_c17191	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-binding protein RBBP7 (Retinoblastoma-binding protein 7) (RBBP-7)
ruditapes_c17191	chromatin modification	cell organization and biogenesis	P	Histone-binding protein RBBP7 (Retinoblastoma-binding protein 7) (RBBP-7)
ruditapes_c17191	"transcription, DNA-dependent"	RNA metabolism	P	Histone-binding protein RBBP7 (Retinoblastoma-binding protein 7) (RBBP-7)
ruditapes_c17191	DNA replication	DNA metabolism	P	Histone-binding protein RBBP7 (Retinoblastoma-binding protein 7) (RBBP-7)
ruditapes_c23836	vesicle-mediated transport	transport	P	Vesicle transport protein USE1 (USE1-like protein)
ruditapes_c23836	transport	transport	P	Vesicle transport protein USE1 (USE1-like protein)
ruditapes_c23836	protein transport	transport	P	Vesicle transport protein USE1 (USE1-like protein)
ruditapes2_c1473	translation	protein metabolism	P	Probable ribosome biogenesis protein RLP24 (Ribosomal L24 domain-containing protein 1)
ruditapes2_c200	translation	protein metabolism	P	Probable ribosome biogenesis protein RLP24 (Ribosomal L24 domain-containing protein 1)
ruditapes2_c1473	ribosome biogenesis	other biological processes	P	Probable ribosome biogenesis protein RLP24 (Ribosomal L24 domain-containing protein 1)
ruditapes2_c200	ribosome biogenesis	other biological processes	P	Probable ribosome biogenesis protein RLP24 (Ribosomal L24 domain-containing protein 1)
ruditapes_c23793	prostaglandin biosynthetic process	other metabolic processes	P	Prostaglandin E synthase 2 (EC 5.3.99.3) (Microsomal prostaglandin E synthase 2) (mPGES-2)
ruditapes_c23793	fatty acid biosynthetic process	other metabolic processes	P	Prostaglandin E synthase 2 (EC 5.3.99.3) (Microsomal prostaglandin E synthase 2) (mPGES-2)
ruditapes_c23793	cell redox homeostasis	other biological processes	P	Prostaglandin E synthase 2 (EC 5.3.99.3) (Microsomal prostaglandin E synthase 2) (mPGES-2)
ruditapes_c23793	lipid biosynthetic process	other metabolic processes	P	Prostaglandin E synthase 2 (EC 5.3.99.3) (Microsomal prostaglandin E synthase 2) (mPGES-2)
ruditapes_lrc39652	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE)
ruditapes2_c1474	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE)
ruditapes2_c767	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE)
ruditapes_lrc39652	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE)
ruditapes2_c1474	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE)
ruditapes2_c56	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE)
ruditapes2_c56	RNA splicing	RNA metabolism	P	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE)
ruditapes2_c767	mRNA processing	RNA metabolism	P	Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE)
ruditapes_c11279	translation	protein metabolism	P	"39S ribosomal protein L14, mitochondrial (L14mt) (MRP-L14)"
ruditapes_c10091	biological_process	other biological processes	P	COP9 signalosome complex subunit 8 (Signalosome subunit 8)
ruditapes_c22498	biological_process	other biological processes	P	COP9 signalosome complex subunit 8 (Signalosome subunit 8)
ruditapes_c19197	transport	transport	P	Vacuolar protein sorting-associated protein 26B (Vesicle protein sorting 26B)
ruditapes_c19197	protein transport	transport	P	Vacuolar protein sorting-associated protein 26B (Vesicle protein sorting 26B)
ruditapes_c5518	vacuolar transport	transport	P	Vacuolar protein sorting-associated protein 26B (Vesicle protein sorting 26B)
ruditapes_c5518	protein transport	transport	P	Vacuolar protein sorting-associated protein 26B (Vesicle protein sorting 26B)
ruditapes_c19197	vacuolar transport	transport	P	Vacuolar protein sorting-associated protein 26B (Vesicle protein sorting 26B)
ruditapes_c5518	transport	transport	P	Vacuolar protein sorting-associated protein 26B (Vesicle protein sorting 26B)
ruditapes_c25878	RNA splicing	RNA metabolism	P	Survival of motor neuron-related-splicing factor 30 (Survival motor neuron domain-containing protein 1)
ruditapes_c25878	mRNA processing	RNA metabolism	P	Survival of motor neuron-related-splicing factor 30 (Survival motor neuron domain-containing protein 1)
ruditapes_c22217	RNA splicing	RNA metabolism	P	Survival of motor neuron-related-splicing factor 30 (Survival motor neuron domain-containing protein 1)
ruditapes_c22217	mRNA processing	RNA metabolism	P	Survival of motor neuron-related-splicing factor 30 (Survival motor neuron domain-containing protein 1)
ruditapes_s37380	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_c10986	metabolic process	other metabolic processes	P	Aldehyde dehydrogenase family 9 member A1-A (EC 1.2.1.3)
ruditapes_c10986	oxidation reduction	other metabolic processes	P	Aldehyde dehydrogenase family 9 member A1-A (EC 1.2.1.3)
ruditapes_c9482	protein amino acid deacetylation	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2)
ruditapes_c19163	DNA replication	DNA metabolism	P	RecQ-mediated genome instability protein 1
ruditapes_c12555	ion transport	transport	P	Trimeric intracellular cation channel type B (TRIC-B) (TRICB) (Transmembrane protein 38B)
ruditapes_c12555	monovalent inorganic cation transport	transport	P	Trimeric intracellular cation channel type B (TRIC-B) (TRICB) (Transmembrane protein 38B)
ruditapes_c12555	transport	transport	P	Trimeric intracellular cation channel type B (TRIC-B) (TRICB) (Transmembrane protein 38B)
ruditapes_c12555	potassium ion transport	transport	P	Trimeric intracellular cation channel type B (TRIC-B) (TRICB) (Transmembrane protein 38B)
ruditapes_c15752	biological_process	other biological processes	P	Protein rogdi homolog
ruditapes_c8423	biological_process	other biological processes	P	Protein rogdi homolog
ruditapes_c14431	protein polyubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase NRDP1 (EC 6.3.2.-) (RING finger protein 41)
ruditapes_c14431	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase NRDP1 (EC 6.3.2.-) (RING finger protein 41)
ruditapes_c14431	melanocyte differentiation	other biological processes	P	E3 ubiquitin-protein ligase NRDP1 (EC 6.3.2.-) (RING finger protein 41)
ruditapes_c14431	induction of apoptosis	death	P	E3 ubiquitin-protein ligase NRDP1 (EC 6.3.2.-) (RING finger protein 41)
ruditapes_lrc38357	biosynthetic process	other metabolic processes	P	"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.131) (Asparagine-linked glycosylation protein 11 homolog) (Glycolipid 2-alpha-mannosyltransferase)"
ruditapes_lrc34363	biosynthetic process	other metabolic processes	P	"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.131) (Asparagine-linked glycosylation protein 11 homolog) (Glycolipid 2-alpha-mannosyltransferase)"
ruditapes_s38434	biosynthetic process	other metabolic processes	P	"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.131) (Asparagine-linked glycosylation protein 11 homolog) (Glycolipid 2-alpha-mannosyltransferase)"
ruditapes_s35531	biosynthetic process	other metabolic processes	P	"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.131) (Asparagine-linked glycosylation protein 11 homolog) (Glycolipid 2-alpha-mannosyltransferase)"
ruditapes_c19783	cell adhesion	cell adhesion	P	Contactin-5
ruditapes2_c1779	transcription from RNA polymerase II promoter	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB7 (RNA polymerase II subunit B7)
ruditapes2_c1779	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase II subunit RPB7 (RNA polymerase II subunit B7)
ruditapes2_c1779	protein amino acid phosphorylation	protein metabolism	P	DNA-directed RNA polymerase II subunit RPB7 (RNA polymerase II subunit B7)
ruditapes_c10931	RNA processing	RNA metabolism	P	La-related protein 7 (La ribonucleoprotein domain family member 7)
ruditapes_c22084	RNA processing	RNA metabolism	P	La-related protein 7 (La ribonucleoprotein domain family member 7)
ruditapes_c28681	transmembrane transport	transport	P	Proton-coupled folate transporter (Heme carrier protein 1) (PCFT/HCP1) (Solute carrier family 46 member 1)
ruditapes_c28681	transport	transport	P	Proton-coupled folate transporter (Heme carrier protein 1) (PCFT/HCP1) (Solute carrier family 46 member 1)
ruditapes_c5476	biological_process	other biological processes	P	Oligosaccharyltransferase complex subunit ostc
ruditapes2_c1128	biological_process	other biological processes	P	Oligosaccharyltransferase complex subunit ostc
ruditapes_c16131	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase RING2-B (EC 6.3.2.-) (RING finger protein 1B-B) (RING1b-B) (RING finger protein 2-B)
ruditapes_c16131	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase RING2-B (EC 6.3.2.-) (RING finger protein 1B-B) (RING1b-B) (RING finger protein 2-B)
ruditapes_c28456	autophagy	other metabolic processes	P	WD repeat domain phosphoinositide-interacting protein 2 (WIPI-2)
ruditapes_c28456	autophagic vacuole formation	stress response	P	WD repeat domain phosphoinositide-interacting protein 2 (WIPI-2)
ruditapes_c28456	autophagic vacuole formation	other metabolic processes	P	WD repeat domain phosphoinositide-interacting protein 2 (WIPI-2)
ruditapes_c28456	autophagic vacuole formation	cell organization and biogenesis	P	WD repeat domain phosphoinositide-interacting protein 2 (WIPI-2)
ruditapes2_c3010	mRNA processing	RNA metabolism	P	THO complex subunit 5 homolog B
ruditapes2_c3010	cell differentiation	other biological processes	P	THO complex subunit 5 homolog B
ruditapes2_c3010	transport	transport	P	THO complex subunit 5 homolog B
ruditapes2_c3010	mRNA transport	transport	P	THO complex subunit 5 homolog B
ruditapes2_c3010	RNA splicing	RNA metabolism	P	THO complex subunit 5 homolog B
ruditapes_lrc30962	dephosphorylation	other metabolic processes	P	Myotubularin-related protein 4 (EC 3.1.3.48)
ruditapes2_c4044	oxidation reduction	other metabolic processes	P	Fatty acyl-CoA reductase 1 (EC 1.2.1.n2) (Male sterility domain-containing protein 2)
ruditapes2_c4044	lipid metabolic process	other metabolic processes	P	Fatty acyl-CoA reductase 1 (EC 1.2.1.n2) (Male sterility domain-containing protein 2)
ruditapes2_c4044	lipid biosynthetic process	other metabolic processes	P	Fatty acyl-CoA reductase 1 (EC 1.2.1.n2) (Male sterility domain-containing protein 2)
ruditapes_lrc39601	cell adhesion	cell adhesion	P	Protein kinase C-binding protein NELL2 (NEL-like protein 2)
ruditapes_c19761	tRNA aminoacylation	RNA metabolism	P	Alanyl-tRNA editing protein Aarsd1-B (Alanyl-tRNA synthetase domain-containing protein 1-B)
ruditapes_c19761	translation	protein metabolism	P	Alanyl-tRNA editing protein Aarsd1-B (Alanyl-tRNA synthetase domain-containing protein 1-B)
ruditapes_c19761	alanyl-tRNA aminoacylation	protein metabolism	P	Alanyl-tRNA editing protein Aarsd1-B (Alanyl-tRNA synthetase domain-containing protein 1-B)
ruditapes_c19761	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanyl-tRNA editing protein Aarsd1-B (Alanyl-tRNA synthetase domain-containing protein 1-B)
ruditapes_lrc34234	translation	protein metabolism	P	60S ribosomal protein L10a
ruditapes2_lrc4121	translation	protein metabolism	P	60S ribosomal protein L10a
ruditapes_lrc16646	translation	protein metabolism	P	60S ribosomal protein L10a
ruditapes2_lrc3632	translation	protein metabolism	P	60S ribosomal protein L10a
ruditapes_s37808	translation	protein metabolism	P	60S ribosomal protein L10a
ruditapes_c11141	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase Nek9 (xNek9) (EC 2.7.11.1) (Nercc1 kinase) (Never in mitosis A-related kinase 9) (NimA-related protein kinase 9)
ruditapes_c11141	cell division	other biological processes	P	Serine/threonine-protein kinase Nek9 (xNek9) (EC 2.7.11.1) (Nercc1 kinase) (Never in mitosis A-related kinase 9) (NimA-related protein kinase 9)
ruditapes_c11141	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase Nek9 (xNek9) (EC 2.7.11.1) (Nercc1 kinase) (Never in mitosis A-related kinase 9) (NimA-related protein kinase 9)
ruditapes_c11141	mitosis	cell cycle and proliferation	P	Serine/threonine-protein kinase Nek9 (xNek9) (EC 2.7.11.1) (Nercc1 kinase) (Never in mitosis A-related kinase 9) (NimA-related protein kinase 9)
ruditapes_c11141	mitosis	cell organization and biogenesis	P	Serine/threonine-protein kinase Nek9 (xNek9) (EC 2.7.11.1) (Nercc1 kinase) (Never in mitosis A-related kinase 9) (NimA-related protein kinase 9)
ruditapes_c11141	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase Nek9 (xNek9) (EC 2.7.11.1) (Nercc1 kinase) (Never in mitosis A-related kinase 9) (NimA-related protein kinase 9)
ruditapes_c25937	induction of apoptosis	death	P	Serine/threonine-protein kinase 3/4 (EC 2.7.11.1) (STE20-like kinase MST1/2) (sMST1/2) [Cleaved into: Serine/threonine-protein kinase 3/4 37kDa subunit; Serine/threonine-protein kinase 3/4 18kDa subunit]
ruditapes_c25937	signal transduction	signal transduction	P	Serine/threonine-protein kinase 3/4 (EC 2.7.11.1) (STE20-like kinase MST1/2) (sMST1/2) [Cleaved into: Serine/threonine-protein kinase 3/4 37kDa subunit; Serine/threonine-protein kinase 3/4 18kDa subunit]
ruditapes_c25937	apoptosis	death	P	Serine/threonine-protein kinase 3/4 (EC 2.7.11.1) (STE20-like kinase MST1/2) (sMST1/2) [Cleaved into: Serine/threonine-protein kinase 3/4 37kDa subunit; Serine/threonine-protein kinase 3/4 18kDa subunit]
ruditapes_c25937	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase 3/4 (EC 2.7.11.1) (STE20-like kinase MST1/2) (sMST1/2) [Cleaved into: Serine/threonine-protein kinase 3/4 37kDa subunit; Serine/threonine-protein kinase 3/4 18kDa subunit]
ruditapes_c25937	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase 3/4 (EC 2.7.11.1) (STE20-like kinase MST1/2) (sMST1/2) [Cleaved into: Serine/threonine-protein kinase 3/4 37kDa subunit; Serine/threonine-protein kinase 3/4 18kDa subunit]
ruditapes_c20431	response to DNA damage stimulus	stress response	P	Structural maintenance of chromosomes protein 6 (SMC protein 6) (SMC-6)
ruditapes_c20431	DNA recombination	DNA metabolism	P	Structural maintenance of chromosomes protein 6 (SMC protein 6) (SMC-6)
ruditapes_c20431	DNA repair	stress response	P	Structural maintenance of chromosomes protein 6 (SMC protein 6) (SMC-6)
ruditapes_c20431	DNA repair	DNA metabolism	P	Structural maintenance of chromosomes protein 6 (SMC protein 6) (SMC-6)
ruditapes_c13684	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase RING2 (EC 6.3.2.-) (RING finger protein 1B) (RING1b) (RING finger protein 2)
ruditapes_c13684	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase RING2 (EC 6.3.2.-) (RING finger protein 1B) (RING1b) (RING finger protein 2)
ruditapes_c7299	tRNA thio-modification	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (ATP-binding domain-containing protein 3) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_c7299	tRNA wobble uridine modification	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (ATP-binding domain-containing protein 3) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_c7299	tRNA processing	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (ATP-binding domain-containing protein 3) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_c7109	multicellular organismal development	developmental processes	P	E3 ubiquitin-protein ligase mib1 (EC 6.3.2.-) (Protein mind bomb)
ruditapes_c7109	Notch signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase mib1 (EC 6.3.2.-) (Protein mind bomb)
ruditapes_c7109	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase mib1 (EC 6.3.2.-) (Protein mind bomb)
ruditapes2_c945	carbohydrate metabolic process	other metabolic processes	P	Carbohydrate sulfotransferase 14 (EC 2.8.2.-) (Dermatan 4-sulfotransferase 1) (D4ST-1) (zD4ST-1)
ruditapes2_c945	carbohydrate biosynthetic process	other metabolic processes	P	Carbohydrate sulfotransferase 14 (EC 2.8.2.-) (Dermatan 4-sulfotransferase 1) (D4ST-1) (zD4ST-1)
ruditapes2_c945	dermatan sulfate proteoglycan metabolic process	other metabolic processes	P	Carbohydrate sulfotransferase 14 (EC 2.8.2.-) (Dermatan 4-sulfotransferase 1) (D4ST-1) (zD4ST-1)
ruditapes2_c1186	DNA replication	DNA metabolism	P	Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1)
ruditapes_c17509	DNA replication	DNA metabolism	P	Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1)
ruditapes_c13907	proteolysis	protein metabolism	P	Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine protease p27 (p27) (EC 3.4.21.-); Protein p20; RNA-directed RNA polymerase p57 (p57) (EC 2.7.7.48)]
ruditapes_c13907	RNA biosynthetic process	RNA metabolism	P	Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine protease p27 (p27) (EC 3.4.21.-); Protein p20; RNA-directed RNA polymerase p57 (p57) (EC 2.7.7.48)]
ruditapes_c13907	viral genome replication	other biological processes	P	Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine protease p27 (p27) (EC 3.4.21.-); Protein p20; RNA-directed RNA polymerase p57 (p57) (EC 2.7.7.48)]
ruditapes_c13907	"transcription, DNA-dependent"	RNA metabolism	P	Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine protease p27 (p27) (EC 3.4.21.-); Protein p20; RNA-directed RNA polymerase p57 (p57) (EC 2.7.7.48)]
ruditapes_c21517	biological_process	other biological processes	P	Interferon-induced very large GTPase 1 (Very large-inducible GTPase-1) (VLIG-1)
ruditapes2_lrc6274	biological_process	other biological processes	P	Otopetrin-2
ruditapes_c24256	purine ribonucleoside monophosphate biosynthetic process	other metabolic processes	P	Adenosine deaminase-like protein (EC 3.5.4.-)
ruditapes_c24256	adenosine catabolic process	other metabolic processes	P	Adenosine deaminase-like protein (EC 3.5.4.-)
ruditapes_c24256	inosine biosynthetic process	other metabolic processes	P	Adenosine deaminase-like protein (EC 3.5.4.-)
ruditapes_c24256	nucleotide metabolic process	other metabolic processes	P	Adenosine deaminase-like protein (EC 3.5.4.-)
ruditapes_c25025	inner ear receptor cell differentiation	developmental processes	P	Usher syndrome type-1G protein homolog (Jackson shaker protein) (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_c25025	inner ear morphogenesis	developmental processes	P	Usher syndrome type-1G protein homolog (Jackson shaker protein) (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_c25025	photoreceptor cell maintenance	other biological processes	P	Usher syndrome type-1G protein homolog (Jackson shaker protein) (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_c25025	equilibrioception	other biological processes	P	Usher syndrome type-1G protein homolog (Jackson shaker protein) (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_c25025	sensory perception of light stimulus	other biological processes	P	Usher syndrome type-1G protein homolog (Jackson shaker protein) (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_c25025	sensory perception of sound	other biological processes	P	Usher syndrome type-1G protein homolog (Jackson shaker protein) (Scaffold protein containing ankyrin repeats and SAM domain)
ruditapes_c13769	morphogenesis of an epithelium	developmental processes	P	Extracellular matrix protein FRAS1
ruditapes2_c968	skin development	developmental processes	P	Extracellular matrix protein FRAS1
ruditapes2_c968	morphogenesis of an epithelium	developmental processes	P	Extracellular matrix protein FRAS1
ruditapes_c13769	skin development	developmental processes	P	Extracellular matrix protein FRAS1
ruditapes2_c968	protein transport	transport	P	Extracellular matrix protein FRAS1
ruditapes_c13769	cell communication	other biological processes	P	Extracellular matrix protein FRAS1
ruditapes2_c968	cell communication	other biological processes	P	Extracellular matrix protein FRAS1
ruditapes_c13769	protein transport	transport	P	Extracellular matrix protein FRAS1
ruditapes_c12894	cell surface receptor linked signal transduction	signal transduction	P	Probable G-protein coupled receptor 133 (G-protein coupled receptor PGR25)
ruditapes_c12894	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 133 (G-protein coupled receptor PGR25)
ruditapes_c12894	neuropeptide signaling pathway	signal transduction	P	Probable G-protein coupled receptor 133 (G-protein coupled receptor PGR25)
ruditapes_c12894	biological_process	other biological processes	P	Probable G-protein coupled receptor 133 (G-protein coupled receptor PGR25)
ruditapes_c20591	biological_process	other biological processes	P	CUB and sushi domain-containing protein 3 (CUB and sushi multiple domains protein 3)
ruditapes_c14934	autophagy	other metabolic processes	P	Ectopic P granules protein 5 homolog
ruditapes_c14934	biological_process	other biological processes	P	Ectopic P granules protein 5 homolog
ruditapes_c23264	cell adhesion	cell adhesion	P	Protocadherin-19
ruditapes_c23264	biological_process	other biological processes	P	Protocadherin-19
ruditapes_c23264	homophilic cell adhesion	cell adhesion	P	Protocadherin-19
ruditapes2_c94	spindle assembly	cell cycle and proliferation	P	StAR-related lipid transfer protein 9 (Kinesin-like protein Kif16a) (START domain-containing protein 9) (StARD9)
ruditapes2_c94	spindle assembly	cell organization and biogenesis	P	StAR-related lipid transfer protein 9 (Kinesin-like protein Kif16a) (START domain-containing protein 9) (StARD9)
ruditapes2_c94	metabolic process	other metabolic processes	P	StAR-related lipid transfer protein 9 (Kinesin-like protein Kif16a) (START domain-containing protein 9) (StARD9)
ruditapes2_c388	Golgi to endosome transport	transport	P	Protein MON2 homolog (Protein SF21)
ruditapes2_c388	transport	transport	P	Protein MON2 homolog (Protein SF21)
ruditapes2_c388	protein transport	transport	P	Protein MON2 homolog (Protein SF21)
ruditapes_c27950	ubiquitin-dependent protein catabolic process	protein metabolism	P	Cullin-9 (CUL-9) (p53-associated parkin-like cytoplasmic protein)
ruditapes_lrc22603	biological_process	other biological processes	P	Protein CLEC16A
ruditapes_c27691	biological_process	other biological processes	P	Protein CLEC16A
ruditapes2_c440	negative regulation of phosphatase activity	other metabolic processes	P	RIMS-binding protein 2 (RIM-BP2)
ruditapes_c19883	regulation of translation	protein metabolism	P	Pumilio homolog 2
ruditapes_c19883	biological_process	other biological processes	P	Pumilio homolog 2
ruditapes2_c2063	negative regulation of autophagy	other metabolic processes	P	Run domain Beclin-1 interacting and cysteine-rich containing protein (Rubicon)
ruditapes2_c2063	negative regulation of endocytosis	transport	P	Run domain Beclin-1 interacting and cysteine-rich containing protein (Rubicon)
ruditapes2_c2063	negative regulation of endocytosis	cell organization and biogenesis	P	Run domain Beclin-1 interacting and cysteine-rich containing protein (Rubicon)
ruditapes2_c2063	endocytosis	transport	P	Run domain Beclin-1 interacting and cysteine-rich containing protein (Rubicon)
ruditapes2_c2063	endocytosis	cell organization and biogenesis	P	Run domain Beclin-1 interacting and cysteine-rich containing protein (Rubicon)
ruditapes2_c2063	autophagy	other metabolic processes	P	Run domain Beclin-1 interacting and cysteine-rich containing protein (Rubicon)
ruditapes2_c1900	activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1) (G-protein-coupled receptor PGR3)
ruditapes2_c1900	signal transduction	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1) (G-protein-coupled receptor PGR3)
ruditapes2_c1900	neuropeptide signaling pathway	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1) (G-protein-coupled receptor PGR3)
ruditapes2_c1900	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 139 (G(q)-coupled orphan receptor GPRg1) (G-protein-coupled receptor PGR3)
ruditapes_c12981	protein modification process	protein metabolism	P	Tubulin polyglutamylase TTLL4 (EC 6.-.-.-) (Tubulin--tyrosine ligase-like protein 4)
ruditapes_c12981	protein polyglutamylation	protein metabolism	P	Tubulin polyglutamylase TTLL4 (EC 6.-.-.-) (Tubulin--tyrosine ligase-like protein 4)
ruditapes_c11059	snRNA processing	RNA metabolism	P	Integrator complex subunit 2 (Int2)
ruditapes_c17167	response to gamma radiation	other biological processes	P	Fanconi anemia group D2 protein homolog (Protein FACD2)
ruditapes_c17167	gamete generation	other biological processes	P	Fanconi anemia group D2 protein homolog (Protein FACD2)
ruditapes_c17167	DNA repair	stress response	P	Fanconi anemia group D2 protein homolog (Protein FACD2)
ruditapes_c17167	DNA repair	DNA metabolism	P	Fanconi anemia group D2 protein homolog (Protein FACD2)
ruditapes_c17167	response to DNA damage stimulus	stress response	P	Fanconi anemia group D2 protein homolog (Protein FACD2)
ruditapes_c17167	cell cycle	cell cycle and proliferation	P	Fanconi anemia group D2 protein homolog (Protein FACD2)
ruditapes_c17167	multicellular organismal development	developmental processes	P	Fanconi anemia group D2 protein homolog (Protein FACD2)
ruditapes_c17167	synapsis	cell cycle and proliferation	P	Fanconi anemia group D2 protein homolog (Protein FACD2)
ruditapes_c17167	synapsis	cell organization and biogenesis	P	Fanconi anemia group D2 protein homolog (Protein FACD2)
ruditapes_lrc33933	biological_process	other biological processes	P	Multiple epidermal growth factor-like domains protein 6 (Multiple EGF-like domains protein 6) (Epidermal growth factor-like protein 3) (EGF-like protein 3)
ruditapes_c31948	snRNA processing	RNA metabolism	P	Integrator complex subunit 8 (Int8)
ruditapes_c28990	interferon-beta production	other biological processes	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes_c28990	defense response to virus	stress response	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes_c28990	response to type I interferon	stress response	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes_c28990	response to virus	other biological processes	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes_c28990	protein K63-linked ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes_c28990	innate immune response	stress response	P	E3 ubiquitin-protein ligase TRIM56 (EC 6.3.2.-) (Tripartite motif-containing protein 56)
ruditapes_c27552	negative regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4E-binding protein 3 (4E-BP3) (eIF4E-binding protein 3)
ruditapes_c27552	regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4E-binding protein 3 (4E-BP3) (eIF4E-binding protein 3)
ruditapes_c27552	biological_process	other biological processes	P	Eukaryotic translation initiation factor 4E-binding protein 3 (4E-BP3) (eIF4E-binding protein 3)
ruditapes_c27552	negative regulation of translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 4E-binding protein 3 (4E-BP3) (eIF4E-binding protein 3)
ruditapes_c19969	biological_process	other biological processes	P	Transmembrane and coiled-coil domains protein 2
ruditapes_c2509	proteolysis	protein metabolism	P	CAAX prenyl protease 1 homolog (EC 3.4.24.84) (Farnesylated proteins-converting enzyme 1) (FACE-1) (Prenyl protein-specific endoprotease 1) (Zinc metalloproteinase Ste24 homolog)
ruditapes_c2509	nuclear envelope organization	cell organization and biogenesis	P	CAAX prenyl protease 1 homolog (EC 3.4.24.84) (Farnesylated proteins-converting enzyme 1) (FACE-1) (Prenyl protein-specific endoprotease 1) (Zinc metalloproteinase Ste24 homolog)
ruditapes_c2509	prenylated protein catabolic process	protein metabolism	P	CAAX prenyl protease 1 homolog (EC 3.4.24.84) (Farnesylated proteins-converting enzyme 1) (FACE-1) (Prenyl protein-specific endoprotease 1) (Zinc metalloproteinase Ste24 homolog)
ruditapes_c17645	ventricular system development	developmental processes	P	Hydrocephalus-inducing protein (Protein Hy-3)
ruditapes_c17645	epithelial cell development	developmental processes	P	Hydrocephalus-inducing protein (Protein Hy-3)
ruditapes_c17645	cilium assembly	cell organization and biogenesis	P	Hydrocephalus-inducing protein (Protein Hy-3)
ruditapes_c17645	multicellular organismal development	developmental processes	P	Hydrocephalus-inducing protein (Protein Hy-3)
ruditapes_c17645	trachea development	developmental processes	P	Hydrocephalus-inducing protein (Protein Hy-3)
ruditapes_s40379	negative regulation of translational initiation	protein metabolism	P	Fragile X mental retardation protein 1 homolog (FMRP) (Protein FMR-1)
ruditapes_s39364	regulation of translation	protein metabolism	P	Fragile X mental retardation protein 1 homolog (FMRP) (Protein FMR-1)
ruditapes_s39364	transport	transport	P	Fragile X mental retardation protein 1 homolog (FMRP) (Protein FMR-1)
ruditapes_s39364	mRNA transport	transport	P	Fragile X mental retardation protein 1 homolog (FMRP) (Protein FMR-1)
ruditapes_s40379	transport	transport	P	Fragile X mental retardation protein 1 homolog (FMRP) (Protein FMR-1)
ruditapes_s39364	negative regulation of translational initiation	protein metabolism	P	Fragile X mental retardation protein 1 homolog (FMRP) (Protein FMR-1)
ruditapes_s40379	regulation of translation	protein metabolism	P	Fragile X mental retardation protein 1 homolog (FMRP) (Protein FMR-1)
ruditapes_s40379	mRNA transport	transport	P	Fragile X mental retardation protein 1 homolog (FMRP) (Protein FMR-1)
ruditapes_c24114	biological_process	other biological processes	P	Hyaluronan and proteoglycan link protein 3
ruditapes_c24114	cell adhesion	cell adhesion	P	Hyaluronan and proteoglycan link protein 3
ruditapes_c19369	carbohydrate metabolic process	other metabolic processes	P	"Beta-1,4-galactosyltransferase 2 (Beta-1,4-GalTase 2) (Beta4Gal-T2) (b4Gal-T2) (EC 2.4.1.-) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 2) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 2) [Includes: Lactose synthase A protein (EC 2.4.1.22); N-acetyllactosamine synthase (EC 2.4.1.90) (Nal synthase); Beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase (EC 2.4.1.38); Beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase (EC 2.4.1.-)]"
ruditapes2_c44	biological_process	other biological processes	P	Tetraspanin-18 (Tspan-18)
ruditapes_c20777	cell adhesion	cell adhesion	P	Collagen alpha-1(XIV) chain
ruditapes_c14966	binding of sperm to zona pellucida	other biological processes	P	Ubiquitin-associated protein 2-like
ruditapes_c22565	biological_process	other biological processes	P	Coiled-coil domain-containing protein 116
ruditapes_c11621	apoptosis	death	P	E3 ubiquitin-protein ligase TRIM69 (EC 6.3.2.-) (RING finger B-box coiled-coil transcription factor) (RING finger protein 36) (Testis-specific RING finger protein) (Tripartite motif-containing protein 69)
ruditapes_c7201	actin cytoskeleton organization	cell organization and biogenesis	P	Nebulin-related-anchoring protein (N-RAP)
ruditapes_c31104	regulation of tyrosine phosphorylation of Stat3 protein	signal transduction	P	"Interleukin-22 receptor subunit alpha-2 (IL-22 receptor subunit alpha-2) (IL-22R-alpha-2) (IL-22RA2) (Cytokine receptor family type 2, soluble 1) (CRF2-S1) (Interleukin-22-binding protein) (IL-22BP) (IL22BP) (ZcytoR16)"
ruditapes_c31104	regulation of tyrosine phosphorylation of Stat3 protein	protein metabolism	P	"Interleukin-22 receptor subunit alpha-2 (IL-22 receptor subunit alpha-2) (IL-22R-alpha-2) (IL-22RA2) (Cytokine receptor family type 2, soluble 1) (CRF2-S1) (Interleukin-22-binding protein) (IL-22BP) (IL22BP) (ZcytoR16)"
ruditapes2_c2032	biological_process	other biological processes	P	WSC domain-containing protein 1
ruditapes_lrc11926	biological_process	other biological processes	P	F-box only protein 34
ruditapes2_c2362	metabolic process	other metabolic processes	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	cation transport	transport	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	ATP biosynthetic process	other metabolic processes	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	manganese ion transport	transport	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	epidermis development	developmental processes	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	transport	transport	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	calcium ion transport	transport	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	Golgi calcium ion homeostasis	other biological processes	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	calcium-dependent cell-cell adhesion	cell adhesion	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	actin cytoskeleton reorganization	cell organization and biogenesis	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	cellular manganese ion homeostasis	other biological processes	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	signal transduction	signal transduction	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	cellular calcium ion homeostasis	other biological processes	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	Golgi calcium ion transport	transport	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes2_c2362	ion transport	transport	P	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 3.6.3.8) (ATP-dependent Ca(2+) pump PMR1)
ruditapes_c27475	biological_process	other biological processes	P	Interleukin-22 receptor subunit alpha-1 (IL-22 receptor subunit alpha-1) (IL-22R-alpha-1) (IL-22RA1)
ruditapes2_c2962	hemopoiesis	developmental processes	P	"Glutaredoxin-related protein 5, mitochondrial (Monothiol glutaredoxin-5)"
ruditapes2_c2962	biological_process	other biological processes	P	"Glutaredoxin-related protein 5, mitochondrial (Monothiol glutaredoxin-5)"
ruditapes2_c2962	cell redox homeostasis	other biological processes	P	"Glutaredoxin-related protein 5, mitochondrial (Monothiol glutaredoxin-5)"
ruditapes2_c577	apoptosis	death	P	DnaJ homolog subfamily B member 13 (Testis and spermatogenesis cell-related protein 6) (Testis spermatocyte apoptosis-related gene 6 protein) (Testis spermatogenesis apoptosis-related gene 3 protein) (Testis spermatogenesis apoptosis-related gene 6 protein)
ruditapes2_c577	spermatogenesis	other biological processes	P	DnaJ homolog subfamily B member 13 (Testis and spermatogenesis cell-related protein 6) (Testis spermatocyte apoptosis-related gene 6 protein) (Testis spermatogenesis apoptosis-related gene 3 protein) (Testis spermatogenesis apoptosis-related gene 6 protein)
ruditapes2_c577	protein folding	protein metabolism	P	DnaJ homolog subfamily B member 13 (Testis and spermatogenesis cell-related protein 6) (Testis spermatocyte apoptosis-related gene 6 protein) (Testis spermatogenesis apoptosis-related gene 3 protein) (Testis spermatogenesis apoptosis-related gene 6 protein)
ruditapes_c28635	tRNA processing	RNA metabolism	P	Zinc phosphodiesterase ELAC protein 2 (EC 3.1.26.11) (ElaC homolog protein 2) (Ribonuclease Z 2) (RNase Z 2) (tRNA 3 endonuclease 2) (tRNase Z 2)
ruditapes_c17244	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) (PLU-1)
ruditapes_c17244	"transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) (PLU-1)
ruditapes_c17244	oxidation reduction	other metabolic processes	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) (PLU-1)
ruditapes_c17244	histone H3-K4 demethylation	protein metabolism	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) (PLU-1)
ruditapes_c17244	histone H3-K4 demethylation	cell organization and biogenesis	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) (PLU-1)
ruditapes_c17244	chromatin modification	cell organization and biogenesis	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) (PLU-1)
ruditapes_c17244	"histone H3-K4 demethylation, trimethyl-H3-K4-specific"	protein metabolism	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) (PLU-1)
ruditapes_c17244	"histone H3-K4 demethylation, trimethyl-H3-K4-specific"	cell organization and biogenesis	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) (PLU-1)
ruditapes_c17244	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific demethylase 5B (EC 1.14.11.-) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) (PLU-1)
ruditapes_c1677	apoptosis	death	P	Serine/threonine-protein kinase LMTK1 (EC 2.7.11.1) (Apoptosis-associated tyrosine kinase) (AATYK) (Brain apoptosis-associated tyrosine kinase) (Lemur tyrosine kinase 1)
ruditapes_c1677	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase LMTK1 (EC 2.7.11.1) (Apoptosis-associated tyrosine kinase) (AATYK) (Brain apoptosis-associated tyrosine kinase) (Lemur tyrosine kinase 1)
ruditapes_c1677	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase LMTK1 (EC 2.7.11.1) (Apoptosis-associated tyrosine kinase) (AATYK) (Brain apoptosis-associated tyrosine kinase) (Lemur tyrosine kinase 1)
ruditapes_c1677	protein amino acid autophosphorylation	protein metabolism	P	Serine/threonine-protein kinase LMTK1 (EC 2.7.11.1) (Apoptosis-associated tyrosine kinase) (AATYK) (Brain apoptosis-associated tyrosine kinase) (Lemur tyrosine kinase 1)
ruditapes_c10482	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 23 (Cofactor required for Sp1 transcriptional activation subunit 3) (CRSP complex subunit 3) (Mediator complex subunit 23) (Protein sur-2 homolog) (mSur-2)
ruditapes_c10482	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 23 (Cofactor required for Sp1 transcriptional activation subunit 3) (CRSP complex subunit 3) (Mediator complex subunit 23) (Protein sur-2 homolog) (mSur-2)
ruditapes_lrc24455	histone H4 acetylation	protein metabolism	P	Transformation/transcription domain-associated protein (Tra1 homolog)
ruditapes_lrc24455	histone H4 acetylation	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (Tra1 homolog)
ruditapes_lrc24455	histone H2A acetylation	protein metabolism	P	Transformation/transcription domain-associated protein (Tra1 homolog)
ruditapes_lrc24455	histone H2A acetylation	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (Tra1 homolog)
ruditapes_lrc24455	"transcription, DNA-dependent"	RNA metabolism	P	Transformation/transcription domain-associated protein (Tra1 homolog)
ruditapes_lrc24455	chromatin modification	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (Tra1 homolog)
ruditapes_lrc24455	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transformation/transcription domain-associated protein (Tra1 homolog)
ruditapes_c15506	positive regulation of gene expression	other metabolic processes	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes_c15506	neuromuscular junction development	developmental processes	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes_c15506	neuromuscular junction development	cell organization and biogenesis	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes_c15506	signal transduction	signal transduction	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes_c15506	positive regulation of cell proliferation	cell cycle and proliferation	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes_c15506	axon regeneration in the peripheral nervous system	cell organization and biogenesis	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes_c15506	cell adhesion	cell adhesion	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes_c15506	mesenchymal-epithelial cell signaling involved in prostate gland development	developmental processes	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes_c15506	mesenchymal-epithelial cell signaling involved in prostate gland development	cell-cell signaling	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes_c15506	response to wounding	stress response	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes_c15506	axon regeneration in the peripheral nervous system	stress response	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes_c15506	axon regeneration in the peripheral nervous system	developmental processes	P	Tenascin (TN) (Hexabrachion) (Tenascin-C) (TN-C)
ruditapes2_c6634	cell migration	other biological processes	P	Tenascin-N (TN-N)
ruditapes_c8432	cell migration	other biological processes	P	Tenascin-N (TN-N)
ruditapes_lrc34233	signal transduction	signal transduction	P	Tenascin-N (TN-N)
ruditapes_c31824	signal transduction	signal transduction	P	Tenascin-N (TN-N)
ruditapes_c31824	axonogenesis	developmental processes	P	Tenascin-N (TN-N)
ruditapes_c31824	axonogenesis	cell organization and biogenesis	P	Tenascin-N (TN-N)
ruditapes_c15516	cell-matrix adhesion	cell adhesion	P	Tenascin-N (TN-N)
ruditapes_c15516	signal transduction	signal transduction	P	Tenascin-N (TN-N)
ruditapes_c10758	signal transduction	signal transduction	P	Tenascin-N (TN-N)
ruditapes_c8432	axonogenesis	developmental processes	P	Tenascin-N (TN-N)
ruditapes_c8432	axonogenesis	cell organization and biogenesis	P	Tenascin-N (TN-N)
ruditapes2_c329	cell migration	other biological processes	P	Tenascin-N (TN-N)
ruditapes_c10758	axonogenesis	cell organization and biogenesis	P	Tenascin-N (TN-N)
ruditapes_c8432	signal transduction	signal transduction	P	Tenascin-N (TN-N)
ruditapes_c8432	cell-matrix adhesion	cell adhesion	P	Tenascin-N (TN-N)
ruditapes_c1223	cell growth	other biological processes	P	Tenascin-N (TN-N)
ruditapes2_c6634	signal transduction	signal transduction	P	Tenascin-N (TN-N)
ruditapes_c10758	cell-matrix adhesion	cell adhesion	P	Tenascin-N (TN-N)
ruditapes_c15516	axonogenesis	developmental processes	P	Tenascin-N (TN-N)
ruditapes_c15516	axonogenesis	cell organization and biogenesis	P	Tenascin-N (TN-N)
ruditapes_c10758	axonogenesis	developmental processes	P	Tenascin-N (TN-N)
ruditapes_c31824	cell growth	other biological processes	P	Tenascin-N (TN-N)
ruditapes2_c329	axonogenesis	developmental processes	P	Tenascin-N (TN-N)
ruditapes2_c329	axonogenesis	cell organization and biogenesis	P	Tenascin-N (TN-N)
ruditapes2_c329	cell-matrix adhesion	cell adhesion	P	Tenascin-N (TN-N)
ruditapes2_c6634	cell growth	other biological processes	P	Tenascin-N (TN-N)
ruditapes_lrc34233	cell growth	other biological processes	P	Tenascin-N (TN-N)
ruditapes_c15516	cell migration	other biological processes	P	Tenascin-N (TN-N)
ruditapes_c31824	cell migration	other biological processes	P	Tenascin-N (TN-N)
ruditapes_c1223	signal transduction	signal transduction	P	Tenascin-N (TN-N)
ruditapes_c10758	cell growth	other biological processes	P	Tenascin-N (TN-N)
ruditapes_c15516	cell growth	other biological processes	P	Tenascin-N (TN-N)
ruditapes_lrc34233	cell migration	other biological processes	P	Tenascin-N (TN-N)
ruditapes_c8432	cell growth	other biological processes	P	Tenascin-N (TN-N)
ruditapes_c1223	cell migration	other biological processes	P	Tenascin-N (TN-N)
ruditapes2_c6634	axonogenesis	developmental processes	P	Tenascin-N (TN-N)
ruditapes2_c6634	axonogenesis	cell organization and biogenesis	P	Tenascin-N (TN-N)
ruditapes2_c329	signal transduction	signal transduction	P	Tenascin-N (TN-N)
ruditapes_c1223	cell-matrix adhesion	cell adhesion	P	Tenascin-N (TN-N)
ruditapes_c1223	axonogenesis	developmental processes	P	Tenascin-N (TN-N)
ruditapes_c1223	axonogenesis	cell organization and biogenesis	P	Tenascin-N (TN-N)
ruditapes_lrc34233	axonogenesis	developmental processes	P	Tenascin-N (TN-N)
ruditapes_lrc34233	axonogenesis	cell organization and biogenesis	P	Tenascin-N (TN-N)
ruditapes2_c6634	cell-matrix adhesion	cell adhesion	P	Tenascin-N (TN-N)
ruditapes2_c329	cell growth	other biological processes	P	Tenascin-N (TN-N)
ruditapes_lrc34233	cell-matrix adhesion	cell adhesion	P	Tenascin-N (TN-N)
ruditapes_c31824	cell-matrix adhesion	cell adhesion	P	Tenascin-N (TN-N)
ruditapes_c10758	cell migration	other biological processes	P	Tenascin-N (TN-N)
ruditapes_c15932	biological_process	other biological processes	P	Fibrocystin-L (Polycystic kidney and hepatic disease 1-like protein 1) (PKHD1-like protein 1) (Protein D86)
ruditapes_c9710	cell surface receptor linked signal transduction	signal transduction	P	Brain-specific angiogenesis inhibitor 3
ruditapes_c9710	G-protein coupled receptor protein signaling pathway	signal transduction	P	Brain-specific angiogenesis inhibitor 3
ruditapes_c9710	negative regulation of angiogenesis	developmental processes	P	Brain-specific angiogenesis inhibitor 3
ruditapes_c9710	neuropeptide signaling pathway	signal transduction	P	Brain-specific angiogenesis inhibitor 3
ruditapes_c9710	signal transduction	signal transduction	P	Brain-specific angiogenesis inhibitor 3
ruditapes_c20473	DNA replication	DNA metabolism	P	Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1)
ruditapes_c23559	negative regulation of phosphatase activity	other metabolic processes	P	Zinc finger FYVE domain-containing protein 1
ruditapes_c14227	biological_process	other biological processes	P	Transmembrane protein 39B
ruditapes_c20548	biological_process	other biological processes	P	Ankyrin repeat domain-containing protein 45
ruditapes2_c1627	biological_process	other biological processes	P	Ankyrin repeat domain-containing protein 45
ruditapes_c31872	axon guidance	developmental processes	P	Neuronal cell adhesion molecule (Nr-CAM) (Neuronal surface protein Bravo) (mBravo) (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
ruditapes_c31872	axon guidance	cell organization and biogenesis	P	Neuronal cell adhesion molecule (Nr-CAM) (Neuronal surface protein Bravo) (mBravo) (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
ruditapes_c31872	angiogenesis	developmental processes	P	Neuronal cell adhesion molecule (Nr-CAM) (Neuronal surface protein Bravo) (mBravo) (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
ruditapes_c31872	cell adhesion	cell adhesion	P	Neuronal cell adhesion molecule (Nr-CAM) (Neuronal surface protein Bravo) (mBravo) (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
ruditapes_c31872	protein localization	other biological processes	P	Neuronal cell adhesion molecule (Nr-CAM) (Neuronal surface protein Bravo) (mBravo) (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
ruditapes_c31872	cell-cell adhesion	cell adhesion	P	Neuronal cell adhesion molecule (Nr-CAM) (Neuronal surface protein Bravo) (mBravo) (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
ruditapes_c31872	central nervous system development	developmental processes	P	Neuronal cell adhesion molecule (Nr-CAM) (Neuronal surface protein Bravo) (mBravo) (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
ruditapes_c31872	clustering of voltage-gated sodium channels	developmental processes	P	Neuronal cell adhesion molecule (Nr-CAM) (Neuronal surface protein Bravo) (mBravo) (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
ruditapes_c31872	clustering of voltage-gated sodium channels	cell organization and biogenesis	P	Neuronal cell adhesion molecule (Nr-CAM) (Neuronal surface protein Bravo) (mBravo) (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
ruditapes_c31872	neuronal action potential propagation	other biological processes	P	Neuronal cell adhesion molecule (Nr-CAM) (Neuronal surface protein Bravo) (mBravo) (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
ruditapes_c7823	rRNA processing	RNA metabolism	P	U3 small nucleolar ribonucleoprotein protein MPP10 (M phase phosphoprotein 10)
ruditapes_c7823	negative regulation of phosphatase activity	other metabolic processes	P	U3 small nucleolar ribonucleoprotein protein MPP10 (M phase phosphoprotein 10)
ruditapes_c7823	ribosome biogenesis	other biological processes	P	U3 small nucleolar ribonucleoprotein protein MPP10 (M phase phosphoprotein 10)
ruditapes_c26455	oxidation reduction	other metabolic processes	P	Lambda-crystallin homolog (EC 1.1.1.45) (L-gulonate 3-dehydrogenase) (Gul3DH)
ruditapes_c26455	fatty acid metabolic process	other metabolic processes	P	Lambda-crystallin homolog (EC 1.1.1.45) (L-gulonate 3-dehydrogenase) (Gul3DH)
ruditapes2_lrc6001	positive regulation of GTPase activity	other biological processes	P	SLIT-ROBO Rho GTPase-activating protein 3 (srGAP3) (Rho GTPase-activating protein 14) (WAVE-associated Rac GTPase-activating protein) (WRP)
ruditapes2_lrc6001	biological_process	other biological processes	P	SLIT-ROBO Rho GTPase-activating protein 3 (srGAP3) (Rho GTPase-activating protein 14) (WAVE-associated Rac GTPase-activating protein) (WRP)
ruditapes2_lrc6001	signal transduction	signal transduction	P	SLIT-ROBO Rho GTPase-activating protein 3 (srGAP3) (Rho GTPase-activating protein 14) (WAVE-associated Rac GTPase-activating protein) (WRP)
ruditapes_lrc33701	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_lrc33701	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_lrc33701	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_lrc33701	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_lrc33701	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_lrc33701	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c31310	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase 2 (EC 6.1.1.10) (Methionyl-tRNA synthetase 2) (MetRS 2)
ruditapes_c31310	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase 2 (EC 6.1.1.10) (Methionyl-tRNA synthetase 2) (MetRS 2)
ruditapes_c31310	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase 2 (EC 6.1.1.10) (Methionyl-tRNA synthetase 2) (MetRS 2)
ruditapes_c31310	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase 2 (EC 6.1.1.10) (Methionyl-tRNA synthetase 2) (MetRS 2)
ruditapes_c31310	translation	protein metabolism	P	Methionine--tRNA ligase 2 (EC 6.1.1.10) (Methionyl-tRNA synthetase 2) (MetRS 2)
ruditapes_c10085	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c10085	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c10085	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c31690	tRNA processing	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c31690	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c31690	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c31690	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c14567	cell cycle	cell cycle and proliferation	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c14567	peptidoglycan biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c14567	regulation of cell shape	cell organization and biogenesis	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c14567	cell division	other biological processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c14567	peptidoglycan-based cell wall biogenesis	other biological processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c14567	biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c14567	cell wall organization	cell organization and biogenesis	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c3037	DNA replication	DNA metabolism	P	DNA polymerase III PolC-type (PolIII) (EC 2.7.7.7)
ruditapes_lrc22007	oxidation reduction	other metabolic processes	P	FMN-dependent NADH-azoreductase 2 (EC 1.7.-.-) (Azo-dye reductase 2) (FMN-dependent NADH-azo compound oxidoreductase 2)
ruditapes2_c3020	oxidation reduction	other metabolic processes	P	FMN-dependent NADH-azoreductase 2 (EC 1.7.-.-) (Azo-dye reductase 2) (FMN-dependent NADH-azo compound oxidoreductase 2)
ruditapes_c18380	transport	transport	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes_c18380	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes_c24805	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c24805	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c23044	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase 2 (EC 6.1.1.5) (Isoleucyl-tRNA synthetase 2) (IleRS 2)
ruditapes_c23044	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase 2 (EC 6.1.1.5) (Isoleucyl-tRNA synthetase 2) (IleRS 2)
ruditapes_c23044	translation	protein metabolism	P	Isoleucine--tRNA ligase 2 (EC 6.1.1.5) (Isoleucyl-tRNA synthetase 2) (IleRS 2)
ruditapes_c23044	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase 2 (EC 6.1.1.5) (Isoleucyl-tRNA synthetase 2) (IleRS 2)
ruditapes_c23044	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase 2 (EC 6.1.1.5) (Isoleucyl-tRNA synthetase 2) (IleRS 2)
ruditapes2_c279	oxidation reduction	other metabolic processes	P	NADPH dehydrogenase (EC 1.6.99.1)
ruditapes_c6785	methylation	other metabolic processes	P	Ribosomal protein L11 methyltransferase (L11 Mtase) (EC 2.1.1.-)
ruditapes_c6785	protein amino acid methylation	protein metabolism	P	Ribosomal protein L11 methyltransferase (L11 Mtase) (EC 2.1.1.-)
ruditapes_c8218	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (Virion protein 1)] (Fragment)
ruditapes_c28750	fatty acid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes_c28750	lipid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes_c28750	metabolic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes_c28886	translation	protein metabolism	P	50S ribosomal protein L24
ruditapes2_c2429	tRNA processing	RNA metabolism	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes2_c2429	methylation	other metabolic processes	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_c18734	sodium ion transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit F (Na(+)-NQR subunit F) (Na(+)-translocating NQR subunit F) (EC 1.6.5.-) (NQR complex subunit F) (NQR-1 subunit F)
ruditapes_c18734	transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit F (Na(+)-NQR subunit F) (Na(+)-translocating NQR subunit F) (EC 1.6.5.-) (NQR complex subunit F) (NQR-1 subunit F)
ruditapes_c18734	oxidation reduction	other metabolic processes	P	Na(+)-translocating NADH-quinone reductase subunit F (Na(+)-NQR subunit F) (Na(+)-translocating NQR subunit F) (EC 1.6.5.-) (NQR complex subunit F) (NQR-1 subunit F)
ruditapes_c18734	ion transport	transport	P	Na(+)-translocating NADH-quinone reductase subunit F (Na(+)-NQR subunit F) (Na(+)-translocating NQR subunit F) (EC 1.6.5.-) (NQR complex subunit F) (NQR-1 subunit F)
ruditapes_c29907	lipid A biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c29907	lipid biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c29424	tRNA processing	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c29424	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c29424	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c29424	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c17280	translation	protein metabolism	P	50S ribosomal protein L6
ruditapes_c9142	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 62) (gp62); Transmembrane protein (TM) (Glycoprotein 40) (gp40)]
ruditapes_c18557	nucleotide-excision repair	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c18557	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c18557	DNA repair	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c18557	DNA repair	DNA metabolism	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c18557	response to DNA damage stimulus	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c18557	SOS response	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c19315	metabolic process	other metabolic processes	P	Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48)
ruditapes_c19315	tryptophan metabolic process	other metabolic processes	P	Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48)
ruditapes_c19315	cellular amino acid biosynthetic process	other metabolic processes	P	Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48)
ruditapes_c19315	tryptophan biosynthetic process	other metabolic processes	P	Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48)
ruditapes_c19315	aromatic amino acid family biosynthetic process	other metabolic processes	P	Indole-3-glycerol phosphate synthase (IGPS) (EC 4.1.1.48)
ruditapes2_c1847	translation	protein metabolism	P	30S ribosomal protein S7
ruditapes_lrc30318	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes_lrc30318	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes_lrc30318	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional repressor NrdR
ruditapes_c30459	metabolic process	other metabolic processes	P	Formyl-coenzyme A transferase (Formyl-CoA transferase) (EC 2.8.3.16)
ruditapes_lrc32088	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c18449	aromatic amino acid family biosynthetic process	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c18449	cellular amino acid biosynthetic process	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c18449	phosphorylation	other metabolic processes	P	Shikimate kinase (SK) (EC 2.7.1.71)
ruditapes_c13071	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimM
ruditapes_c13071	rRNA processing	RNA metabolism	P	Ribosome maturation factor RimM
ruditapes_c8026	translation	protein metabolism	P	50S ribosomal protein L13
ruditapes_lrc10811	methionine biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_lrc10811	methylation	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_lrc10811	cellular amino acid biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes2_lrc4175	regulation of cell shape	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_lrc4175	alanine metabolic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_lrc3355	alanine metabolic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_lrc4175	peptidoglycan biosynthetic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_lrc3355	peptidoglycan biosynthetic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_lrc3355	regulation of cell shape	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_lrc4175	cell wall organization	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes2_lrc3355	cell wall organization	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_c18667	thiamin biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c18667	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c18667	metabolic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c18667	terpenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes2_c1519	fatty acid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2)
ruditapes2_c1519	lipid biosynthetic process	other metabolic processes	P	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (ACCase subunit alpha) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (EC 6.4.1.2)
ruditapes_lrc19580	carbohydrate metabolic process	other metabolic processes	P	"Fructose-1,6-bisphosphatase class 1 (FBPase class 1) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1)"
ruditapes_c10040	tRNA modification	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c10040	tRNA processing	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c10040	GTP catabolic process	other metabolic processes	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c10040	small GTPase mediated signal transduction	signal transduction	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c30199	metabolic process	other metabolic processes	P	Glutathione biosynthesis bifunctional protein GshAB (Gamma-GCS-GS) (GCS-GS) [Includes: Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-ECS) (GCS) (Gamma-glutamylcysteine synthetase); Glutathione synthetase (EC 6.3.2.3) (GSH synthetase) (GS) (GSH-S) (GSHase) (Glutathione synthase)]
ruditapes_c30199	glutathione biosynthetic process	other metabolic processes	P	Glutathione biosynthesis bifunctional protein GshAB (Gamma-GCS-GS) (GCS-GS) [Includes: Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-ECS) (GCS) (Gamma-glutamylcysteine synthetase); Glutathione synthetase (EC 6.3.2.3) (GSH synthetase) (GS) (GSH-S) (GSHase) (Glutathione synthase)]
ruditapes_c23191	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Putative leader protein; Capsid protein 1 (CP-1) (22.5 kDa protein) (Coat protein 1); Capsid protein 2 (CP-2) (26 kDa protein) (Coat protein 2); Capsid protein 3 (CP-3) (31 kDa protein) (Coat protein 3); Putative helicase (EC 3.6.4.-) (Putative NTP-binding protein); Probable picornain 3C-like protease (3C-like protease) (EC 3.4.22.-); Probable RNA-directed RNA polymerase (EC 2.7.7.48)]
ruditapes_c23191	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Putative leader protein; Capsid protein 1 (CP-1) (22.5 kDa protein) (Coat protein 1); Capsid protein 2 (CP-2) (26 kDa protein) (Coat protein 2); Capsid protein 3 (CP-3) (31 kDa protein) (Coat protein 3); Putative helicase (EC 3.6.4.-) (Putative NTP-binding protein); Probable picornain 3C-like protease (3C-like protease) (EC 3.4.22.-); Probable RNA-directed RNA polymerase (EC 2.7.7.48)]
ruditapes_c23191	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Putative leader protein; Capsid protein 1 (CP-1) (22.5 kDa protein) (Coat protein 1); Capsid protein 2 (CP-2) (26 kDa protein) (Coat protein 2); Capsid protein 3 (CP-3) (31 kDa protein) (Coat protein 3); Putative helicase (EC 3.6.4.-) (Putative NTP-binding protein); Probable picornain 3C-like protease (3C-like protease) (EC 3.4.22.-); Probable RNA-directed RNA polymerase (EC 2.7.7.48)]
ruditapes_c23191	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Putative leader protein; Capsid protein 1 (CP-1) (22.5 kDa protein) (Coat protein 1); Capsid protein 2 (CP-2) (26 kDa protein) (Coat protein 2); Capsid protein 3 (CP-3) (31 kDa protein) (Coat protein 3); Putative helicase (EC 3.6.4.-) (Putative NTP-binding protein); Probable picornain 3C-like protease (3C-like protease) (EC 3.4.22.-); Probable RNA-directed RNA polymerase (EC 2.7.7.48)]
ruditapes_lrc12637	proteolysis	protein metabolism	P	Replicase polyprotein 1ab [Cleaved into: Leader protease (L-PRO) (EC 3.4.22.-); Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)]
ruditapes_lrc12637	methylation	other metabolic processes	P	Replicase polyprotein 1ab [Cleaved into: Leader protease (L-PRO) (EC 3.4.22.-); Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)]
ruditapes_lrc12637	RNA processing	RNA metabolism	P	Replicase polyprotein 1ab [Cleaved into: Leader protease (L-PRO) (EC 3.4.22.-); Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)]
ruditapes_lrc12637	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab [Cleaved into: Leader protease (L-PRO) (EC 3.4.22.-); Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)]
ruditapes_lrc12637	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab [Cleaved into: Leader protease (L-PRO) (EC 3.4.22.-); Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)]
ruditapes_lrc12637	mRNA methylation	RNA metabolism	P	Replicase polyprotein 1ab [Cleaved into: Leader protease (L-PRO) (EC 3.4.22.-); Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)]
ruditapes_lrc12637	viral genome replication	other biological processes	P	Replicase polyprotein 1ab [Cleaved into: Leader protease (L-PRO) (EC 3.4.22.-); Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)]
ruditapes_c13437	transport	transport	P	Spermidine/putrescine import ATP-binding protein PotA (EC 3.6.3.31)
ruditapes_c13437	ATP catabolic process	other metabolic processes	P	Spermidine/putrescine import ATP-binding protein PotA (EC 3.6.3.31)
ruditapes_c13437	polyamine transport	transport	P	Spermidine/putrescine import ATP-binding protein PotA (EC 3.6.3.31)
ruditapes_c16940	response to DNA damage stimulus	stress response	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_c16940	DNA repair	stress response	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_c16940	DNA repair	DNA metabolism	P	Probable endonuclease 4 (EC 3.1.21.2) (Endodeoxyribonuclease IV) (Endonuclease IV)
ruditapes_c15410	methylation	other metabolic processes	P	Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO (EC 2.1.1.74) (Folate-dependent tRNA (uracil-5-)-methyltransferase) (Folate-dependent tRNA(M-5-U54)-methyltransferase)
ruditapes_c15410	tRNA processing	RNA metabolism	P	Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO (EC 2.1.1.74) (Folate-dependent tRNA (uracil-5-)-methyltransferase) (Folate-dependent tRNA(M-5-U54)-methyltransferase)
ruditapes_c23056	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes_c23056	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes_c23056	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes_c23056	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes_c26604	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Heat-inducible transcription repressor HrcA
ruditapes_c26604	"transcription, DNA-dependent"	RNA metabolism	P	Heat-inducible transcription repressor HrcA
ruditapes_c26604	response to stress	stress response	P	Heat-inducible transcription repressor HrcA
ruditapes_c20375	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c20375	tRNA processing	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c20375	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c20375	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c8516	proteolysis	protein metabolism	P	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp)
ruditapes_c27255	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27255	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27255	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27255	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27255	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c31442	isoprenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c31442	terpenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c31442	phosphorylation	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c9091	protein tetramerization	cell organization and biogenesis	P	Protein-export protein SecB
ruditapes_c9091	protein transport	transport	P	Protein-export protein SecB
ruditapes_c9091	transport	transport	P	Protein-export protein SecB
ruditapes2_lrc1626	GTP catabolic process	other metabolic processes	P	Translation initiation factor IF-2
ruditapes2_lrc1626	translational initiation	protein metabolism	P	Translation initiation factor IF-2
ruditapes2_lrc1626	translation	protein metabolism	P	Translation initiation factor IF-2
ruditapes_c19154	peptidoglycan turnover	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes_c19154	amino sugar metabolic process	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes_c19154	phosphorylation	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes_c19154	carbohydrate metabolic process	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes2_c463	cell division	other biological processes	P	Cell division protein FtsL
ruditapes2_c463	cell cycle	cell cycle and proliferation	P	Cell division protein FtsL
ruditapes_lrc38854	carbohydrate metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_lrc38854	carbohydrate biosynthetic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_lrc38854	glutamine metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_lrc38854	metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c22296	translation	protein metabolism	P	Translation initiation factor IF-1
ruditapes_c22296	translational initiation	protein metabolism	P	Translation initiation factor IF-1
ruditapes_lrc15443	translation	protein metabolism	P	Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.-)
ruditapes_lrc29212	translation	protein metabolism	P	Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.-)
ruditapes_lrc37110	ribosome biogenesis	other biological processes	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_lrc37110	rRNA processing	RNA metabolism	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_s39919	oxidation reduction	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes_s39919	glycine metabolic process	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes_c4217	cell wall organization	cell organization and biogenesis	P	Isoprenyl transferase 2 (EC 2.5.1.-)
ruditapes_c4217	cell division	other biological processes	P	Isoprenyl transferase 2 (EC 2.5.1.-)
ruditapes_c4217	cell cycle	cell cycle and proliferation	P	Isoprenyl transferase 2 (EC 2.5.1.-)
ruditapes_c4217	peptidoglycan biosynthetic process	other metabolic processes	P	Isoprenyl transferase 2 (EC 2.5.1.-)
ruditapes_c4217	regulation of cell shape	cell organization and biogenesis	P	Isoprenyl transferase 2 (EC 2.5.1.-)
ruditapes_c28537	translation	protein metabolism	P	50S ribosomal protein L27
ruditapes_c5193	DNA repair	stress response	P	Probable ATP-dependent helicase DinG (EC 3.6.4.12) (DNA-damage-inducible protein G)
ruditapes_c5193	DNA repair	DNA metabolism	P	Probable ATP-dependent helicase DinG (EC 3.6.4.12) (DNA-damage-inducible protein G)
ruditapes_c5193	DNA recombination	DNA metabolism	P	Probable ATP-dependent helicase DinG (EC 3.6.4.12) (DNA-damage-inducible protein G)
ruditapes_c5193	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Probable ATP-dependent helicase DinG (EC 3.6.4.12) (DNA-damage-inducible protein G)
ruditapes_c5193	response to DNA damage stimulus	stress response	P	Probable ATP-dependent helicase DinG (EC 3.6.4.12) (DNA-damage-inducible protein G)
ruditapes2_lrc4443	tRNA aminoacylation	RNA metabolism	P	Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-)
ruditapes2_lrc4443	tRNA modification	RNA metabolism	P	Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-)
ruditapes_lrc37343	DNA repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc37343	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc37343	DNA repair	DNA metabolism	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc37343	response to DNA damage stimulus	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc37343	SOS response	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc37343	nucleotide-excision repair	stress response	P	UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
ruditapes_lrc11086	pentose-phosphate shunt	other metabolic processes	P	Transaldolase A (EC 2.2.1.2)
ruditapes_lrc11086	carbohydrate metabolic process	other metabolic processes	P	Transaldolase A (EC 2.2.1.2)
ruditapes_c21500	DNA replication	DNA metabolism	P	Putative replication protein PDa0002
ruditapes2_c1530	polysaccharide biosynthetic process	other metabolic processes	P	Receptor polysaccharide phosphotransferase WefC (EC 2.7.-.-) (Stealth protein WefC)
ruditapes_c19589	evasion by virus of host immune response	stress response	P	Nucleoprotein (Nucleocapsid protein) (Protein N)
ruditapes_c30551	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c30551	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c13167	"transcription, DNA-dependent"	RNA metabolism	P	Topless-related protein 3
ruditapes_c13167	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Topless-related protein 3
ruditapes_c15256	response to stimulus	other biological processes	P	E3 ubiquitin-protein ligase HOS1 (EC 6.3.2.-) (Protein HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 1) (RING finger protein HOS1)
ruditapes_c15256	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase HOS1 (EC 6.3.2.-) (Protein HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 1) (RING finger protein HOS1)
ruditapes_c15256	response to cold	stress response	P	E3 ubiquitin-protein ligase HOS1 (EC 6.3.2.-) (Protein HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 1) (RING finger protein HOS1)
ruditapes_c15256	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase HOS1 (EC 6.3.2.-) (Protein HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 1) (RING finger protein HOS1)
ruditapes_c20497	cell wall organization	cell organization and biogenesis	P	Probable pectinesterase/pectinesterase inhibitor 19 [Includes: Pectinesterase inhibitor 19 (Pectin methylesterase inhibitor 19); Pectinesterase 19 (PE 19) (EC 3.1.1.11) (Pectin methylesterase 19) (AtPME19) (Pectin methylesterase 5) (AtPME5)]
ruditapes_c20497	cell wall modification	cell organization and biogenesis	P	Probable pectinesterase/pectinesterase inhibitor 19 [Includes: Pectinesterase inhibitor 19 (Pectin methylesterase inhibitor 19); Pectinesterase 19 (PE 19) (EC 3.1.1.11) (Pectin methylesterase 19) (AtPME19) (Pectin methylesterase 5) (AtPME5)]
ruditapes_c20497	negative regulation of catalytic activity	other biological processes	P	Probable pectinesterase/pectinesterase inhibitor 19 [Includes: Pectinesterase inhibitor 19 (Pectin methylesterase inhibitor 19); Pectinesterase 19 (PE 19) (EC 3.1.1.11) (Pectin methylesterase 19) (AtPME19) (Pectin methylesterase 5) (AtPME5)]
ruditapes_c17346	metabolic process	other metabolic processes	P	Alpha-farnesene synthase (EC 4.2.3.46)
ruditapes_c17314	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase 17 (AtMPK17) (MAP kinase 17) (EC 2.7.11.24)
ruditapes_c17314	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase 17 (AtMPK17) (MAP kinase 17) (EC 2.7.11.24)
ruditapes_c17314	protein amino acid autophosphorylation	protein metabolism	P	Mitogen-activated protein kinase 17 (AtMPK17) (MAP kinase 17) (EC 2.7.11.24)
ruditapes_c16899	chlorophyll catabolic process	other metabolic processes	P	"Chlorophyll(ide) b reductase NOL, chloroplastic (EC 1.1.1.294) (Protein NON-YELLOW COLORING 1-LIKE) (OsNOL) (Protein NYC1-LIKE) (Short-chain dehydrogenase/reductase NOL)"
ruditapes_c16899	oxidation reduction	other metabolic processes	P	"Chlorophyll(ide) b reductase NOL, chloroplastic (EC 1.1.1.294) (Protein NON-YELLOW COLORING 1-LIKE) (OsNOL) (Protein NYC1-LIKE) (Short-chain dehydrogenase/reductase NOL)"
ruditapes_c16899	metabolic process	other metabolic processes	P	"Chlorophyll(ide) b reductase NOL, chloroplastic (EC 1.1.1.294) (Protein NON-YELLOW COLORING 1-LIKE) (OsNOL) (Protein NYC1-LIKE) (Short-chain dehydrogenase/reductase NOL)"
ruditapes_lrc35883	biological_process	other biological processes	P	Probable mannan synthase 1 (EC 2.4.1.-) (Cellulose synthase-like protein A1) (AtCslA1)
ruditapes_lrc35883	cell wall organization	cell organization and biogenesis	P	Probable mannan synthase 1 (EC 2.4.1.-) (Cellulose synthase-like protein A1) (AtCslA1)
ruditapes_s36899	cell wall organization	cell organization and biogenesis	P	Probable mannan synthase 1 (EC 2.4.1.-) (Cellulose synthase-like protein A1) (AtCslA1)
ruditapes_s36899	biological_process	other biological processes	P	Probable mannan synthase 1 (EC 2.4.1.-) (Cellulose synthase-like protein A1) (AtCslA1)
ruditapes_c21020	transport	transport	P	Probable peptide/nitrate transporter At2g02020
ruditapes_c21020	oligopeptide transport	transport	P	Probable peptide/nitrate transporter At2g02020
ruditapes_c15066	biological_process	other biological processes	P	F-box protein At3g12350
ruditapes_c18178	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c18178	DNA replication	DNA metabolism	P	DNA polymerase (EC 2.7.7.7)
ruditapes_c9701	"transcription, DNA-dependent"	RNA metabolism	P	RNA-dependent RNA polymerase (EC 2.7.7.48) (Replicase) (Transcriptase)
ruditapes_c9701	viral genome replication	other biological processes	P	RNA-dependent RNA polymerase (EC 2.7.7.48) (Replicase) (Transcriptase)
ruditapes_c22547	viral genome replication	other biological processes	P	RNA-dependent RNA polymerase (EC 2.7.7.48) (Replicase) (Transcriptase)
ruditapes_c22547	"transcription, DNA-dependent"	RNA metabolism	P	RNA-dependent RNA polymerase (EC 2.7.7.48) (Replicase) (Transcriptase)
ruditapes_c22547	RNA biosynthetic process	RNA metabolism	P	RNA-dependent RNA polymerase (EC 2.7.7.48) (Replicase) (Transcriptase)
ruditapes_c9701	RNA biosynthetic process	RNA metabolism	P	RNA-dependent RNA polymerase (EC 2.7.7.48) (Replicase) (Transcriptase)
ruditapes_c17320	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta)
ruditapes_c24447	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_c31131	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c31131	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c20553	protein amino acid glycosylation	protein metabolism	P	"UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 (Beta-1,3-GalNAc-T1) (EC 2.4.1.79) (Beta-1,3-galactosyltransferase 3) (Beta-1,3-GalTase 3) (Beta3Gal-T3) (Beta3GalT3) (b3Gal-T3) (Beta-3-Gx-T3) (Galactosylgalactosylglucosylceramide beta-D-acetyl-galactosaminyltransferase) (Globoside synthase) (UDP-N-acetylgalactosamine:globotriaosylceramide beta-1,3-N-acetylgalactosaminyltransferase)"
ruditapes2_c3496	multicellular organismal development	developmental processes	P	"Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase (EC 2.4.1.206) (Lactotriaosylceramide synthase) (Lc(3)Cer synthase) (Lc3 synthase) (UDP-GlcNAc:beta-Gal beta-1,3-N-acetylglucosaminyltransferase 5) (BGnT-5) (Beta-1,3-Gn-T5) (Beta-1,3-N-acetylglucosaminyltransferase 5) (Beta3Gn-T5)"
ruditapes2_c3496	protein amino acid glycosylation	protein metabolism	P	"Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase (EC 2.4.1.206) (Lactotriaosylceramide synthase) (Lc(3)Cer synthase) (Lc3 synthase) (UDP-GlcNAc:beta-Gal beta-1,3-N-acetylglucosaminyltransferase 5) (BGnT-5) (Beta-1,3-Gn-T5) (Beta-1,3-N-acetylglucosaminyltransferase 5) (Beta3Gn-T5)"
ruditapes2_c3496	central nervous system development	developmental processes	P	"Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase (EC 2.4.1.206) (Lactotriaosylceramide synthase) (Lc(3)Cer synthase) (Lc3 synthase) (UDP-GlcNAc:beta-Gal beta-1,3-N-acetylglucosaminyltransferase 5) (BGnT-5) (Beta-1,3-Gn-T5) (Beta-1,3-N-acetylglucosaminyltransferase 5) (Beta3Gn-T5)"
ruditapes2_c1488	hibernation	other biological processes	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes2_c1488	transport	transport	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes2_lrc3941	hibernation	other biological processes	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_c36933	hibernation	other biological processes	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_c36933	transport	transport	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes2_lrc3941	transport	transport	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_lrc32338	hibernation	other biological processes	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes2_lrc4378	transport	transport	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes_lrc32338	transport	transport	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes2_lrc4378	hibernation	other biological processes	P	"Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)"
ruditapes2_c1092	peptidoglycan catabolic process	other metabolic processes	P	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Peptidoglycan recognition protein 2) (Peptidoglycan recognition protein long) (PGRP-L)
ruditapes2_c1092	detection of bacterium	other biological processes	P	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Peptidoglycan recognition protein 2) (Peptidoglycan recognition protein long) (PGRP-L)
ruditapes_c38928	detection of bacterium	other biological processes	P	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Peptidoglycan recognition protein 2) (Peptidoglycan recognition protein long) (PGRP-L)
ruditapes_c38928	peptidoglycan catabolic process	other metabolic processes	P	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Peptidoglycan recognition protein 2) (Peptidoglycan recognition protein long) (PGRP-L)
ruditapes2_c1092	defense response to Gram-positive bacterium	stress response	P	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Peptidoglycan recognition protein 2) (Peptidoglycan recognition protein long) (PGRP-L)
ruditapes_c38928	defense response to Gram-positive bacterium	stress response	P	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Peptidoglycan recognition protein 2) (Peptidoglycan recognition protein long) (PGRP-L)
ruditapes_c2633	meiosis	cell cycle and proliferation	P	Poly(ADP-ribose) glycohydrolase pme-3 (EC 3.2.1.143) (Poly ADP-ribose metabolism enzyme 3)
ruditapes2_c1306	meiosis	cell cycle and proliferation	P	Poly(ADP-ribose) glycohydrolase pme-3 (EC 3.2.1.143) (Poly ADP-ribose metabolism enzyme 3)
ruditapes2_c1306	meiotic chromosome segregation	cell cycle and proliferation	P	Poly(ADP-ribose) glycohydrolase pme-3 (EC 3.2.1.143) (Poly ADP-ribose metabolism enzyme 3)
ruditapes_c2633	meiotic chromosome segregation	cell cycle and proliferation	P	Poly(ADP-ribose) glycohydrolase pme-3 (EC 3.2.1.143) (Poly ADP-ribose metabolism enzyme 3)
ruditapes_c2633	carbohydrate metabolic process	other metabolic processes	P	Poly(ADP-ribose) glycohydrolase pme-3 (EC 3.2.1.143) (Poly ADP-ribose metabolism enzyme 3)
ruditapes2_c1306	carbohydrate metabolic process	other metabolic processes	P	Poly(ADP-ribose) glycohydrolase pme-3 (EC 3.2.1.143) (Poly ADP-ribose metabolism enzyme 3)
ruditapes_c21882	lipid transport	transport	P	Vitellogenin
ruditapes_c25267	RNA biosynthetic process	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c25267	RNA processing	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c25267	proteolysis	protein metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c25267	mRNA capping	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c25267	metabolic process	other metabolic processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c25267	"transcription, DNA-dependent"	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c25267	mRNA processing	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c25267	methylation	other metabolic processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c25267	mRNA methylation	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c25267	viral genome replication	other biological processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c25706	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase fnkA (EC 2.7.11.1) (FNIP repeat-containing protein A)
ruditapes_c25706	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase fnkA (EC 2.7.11.1) (FNIP repeat-containing protein A)
ruditapes_lrc38459	chemotaxis	other biological processes	P	Nck-associated protein 1 homolog
ruditapes_lrc38459	cell motion	other biological processes	P	Nck-associated protein 1 homolog
ruditapes_lrc38459	positive phototaxis	other biological processes	P	Nck-associated protein 1 homolog
ruditapes_lrc38459	regulation of actin polymerization or depolymerization	protein metabolism	P	Nck-associated protein 1 homolog
ruditapes_lrc38459	regulation of actin polymerization or depolymerization	cell organization and biogenesis	P	Nck-associated protein 1 homolog
ruditapes_lrc38459	cell-substrate adhesion	cell adhesion	P	Nck-associated protein 1 homolog
ruditapes_lrc38459	cell-cell adhesion	cell adhesion	P	Nck-associated protein 1 homolog
ruditapes_lrc38459	hyperosmotic response	stress response	P	Nck-associated protein 1 homolog
ruditapes_lrc38459	filopodium assembly	cell organization and biogenesis	P	Nck-associated protein 1 homolog
ruditapes_lrc38459	cell adhesion	cell adhesion	P	Nck-associated protein 1 homolog
ruditapes_lrc38459	positive regulation of actin filament polymerization	protein metabolism	P	Nck-associated protein 1 homolog
ruditapes_lrc38459	positive regulation of actin filament polymerization	cell organization and biogenesis	P	Nck-associated protein 1 homolog
ruditapes_c13824	signal transduction	signal transduction	P	Hybrid signal transduction protein dokA
ruditapes_c22864	signal transduction	signal transduction	P	Hybrid signal transduction protein dokA
ruditapes_c13824	sporulation resulting in formation of a cellular spore	other biological processes	P	Hybrid signal transduction protein dokA
ruditapes_c13824	peptidyl-histidine phosphorylation	protein metabolism	P	Hybrid signal transduction protein dokA
ruditapes_c13824	osmosensory signaling pathway via two-component system	signal transduction	P	Hybrid signal transduction protein dokA
ruditapes_c13824	cell motion	other biological processes	P	Hybrid signal transduction protein dokA
ruditapes_c22864	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Hybrid signal transduction protein dokA
ruditapes_c22864	osmosensory signaling pathway via two-component system	signal transduction	P	Hybrid signal transduction protein dokA
ruditapes_c22864	osmosensory signaling pathway via two-component system	stress response	P	Hybrid signal transduction protein dokA
ruditapes_c22864	two-component signal transduction system (phosphorelay)	signal transduction	P	Hybrid signal transduction protein dokA
ruditapes_c22864	cell motion	other biological processes	P	Hybrid signal transduction protein dokA
ruditapes_c13824	two-component signal transduction system (phosphorelay)	signal transduction	P	Hybrid signal transduction protein dokA
ruditapes_c13824	osmosensory signaling pathway via two-component system	stress response	P	Hybrid signal transduction protein dokA
ruditapes_c22864	sporulation resulting in formation of a cellular spore	other biological processes	P	Hybrid signal transduction protein dokA
ruditapes_c13824	phosphorylation	other metabolic processes	P	Hybrid signal transduction protein dokA
ruditapes_c13824	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Hybrid signal transduction protein dokA
ruditapes_c22864	peptidyl-histidine phosphorylation	protein metabolism	P	Hybrid signal transduction protein dokA
ruditapes_c22864	phosphorylation	other metabolic processes	P	Hybrid signal transduction protein dokA
ruditapes_c21835	signal transduction	signal transduction	P	Probable myosin light chain kinase DDB
ruditapes2_c3417	phosphorylation	other metabolic processes	P	Probable myosin light chain kinase DDB
ruditapes_c3415	phosphorylation	other metabolic processes	P	Probable myosin light chain kinase DDB
ruditapes_s37788	signal transduction	signal transduction	P	Probable myosin light chain kinase DDB
ruditapes2_c3475	protein amino acid phosphorylation	protein metabolism	P	Probable myosin light chain kinase DDB
ruditapes2_c3417	protein amino acid phosphorylation	protein metabolism	P	Probable myosin light chain kinase DDB
ruditapes2_c3417	signal transduction	signal transduction	P	Probable myosin light chain kinase DDB
ruditapes2_c3475	signal transduction	signal transduction	P	Probable myosin light chain kinase DDB
ruditapes_c3415	signal transduction	signal transduction	P	Probable myosin light chain kinase DDB
ruditapes_c3415	protein amino acid phosphorylation	protein metabolism	P	Probable myosin light chain kinase DDB
ruditapes_s37788	phosphorylation	other metabolic processes	P	Probable myosin light chain kinase DDB
ruditapes2_c3475	phosphorylation	other metabolic processes	P	Probable myosin light chain kinase DDB
ruditapes_c21835	protein amino acid phosphorylation	protein metabolism	P	Probable myosin light chain kinase DDB
ruditapes_s37788	protein amino acid phosphorylation	protein metabolism	P	Probable myosin light chain kinase DDB
ruditapes_c21835	phosphorylation	other metabolic processes	P	Probable myosin light chain kinase DDB
ruditapes_c25510	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 16 (dipks16) (EC 2.3.1.-)
ruditapes_c25510	sexual reproduction	other biological processes	P	Probable polyketide synthase 16 (dipks16) (EC 2.3.1.-)
ruditapes_c25510	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 16 (dipks16) (EC 2.3.1.-)
ruditapes_c25510	metabolic process	other metabolic processes	P	Probable polyketide synthase 16 (dipks16) (EC 2.3.1.-)
ruditapes_c8535	metabolic process	other metabolic processes	P	Probable polyketide synthase 17 (dipks17) (EC 2.3.1.-)
ruditapes_c8535	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 17 (dipks17) (EC 2.3.1.-)
ruditapes_c21266	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 17 (dipks17) (EC 2.3.1.-)
ruditapes_c8535	oxidation reduction	other metabolic processes	P	Probable polyketide synthase 17 (dipks17) (EC 2.3.1.-)
ruditapes_c21266	metabolic process	other metabolic processes	P	Probable polyketide synthase 17 (dipks17) (EC 2.3.1.-)
ruditapes_c21266	biosynthetic process	other metabolic processes	P	Probable polyketide synthase 17 (dipks17) (EC 2.3.1.-)
ruditapes_c7721	tRNA aminoacylation for protein translation	protein metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_c7721	tRNA aminoacylation for protein translation	RNA metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_c7721	tryptophanyl-tRNA aminoacylation	protein metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_c7721	tryptophanyl-tRNA aminoacylation	RNA metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes_c7721	translation	protein metabolism	P	"Tryptophan--tRNA ligase, mitochondrial (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)"
ruditapes2_lrc4450	cell adhesion	cell adhesion	P	Phosphatidylinositol-glycan-specific phospholipase D (PI-G PLD) (EC 3.1.4.50) (Glycosyl-phosphatidylinositol-specific phospholipase D) (GPI-PLD) (GPI-specific phospholipase D) (Phospholipase G)
ruditapes2_lrc4450	GPI anchor release	other metabolic processes	P	Phosphatidylinositol-glycan-specific phospholipase D (PI-G PLD) (EC 3.1.4.50) (Glycosyl-phosphatidylinositol-specific phospholipase D) (GPI-PLD) (GPI-specific phospholipase D) (Phospholipase G)
ruditapes_c10641	"mating behavior, sex discrimination"	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	learning	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	aggressive behavior	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	catecholamine metabolic process	other metabolic processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	larval locomotory behavior	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	memory	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	flight behavior	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	regulation of behavior	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	inter-male aggressive behavior	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	oxidation reduction	other metabolic processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	male courtship behavior	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	regulation of forward locomotion	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	neurotransmitter biosynthetic process	cell-cell signaling	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	behavioral response to ethanol	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	ovulation	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	locomotion	other biological processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	octopamine biosynthetic process	other metabolic processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	octopamine biosynthetic process	cell-cell signaling	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c10641	neurotransmitter biosynthetic process	other metabolic processes	P	Tyramine beta-hydroxylase (EC 1.14.17.-)
ruditapes_c6628	Notch signaling pathway	signal transduction	P	Gamma-secretase subunit pen-2 (Presenilin enhancer protein 2)
ruditapes_c23406	response to ecdysone	developmental processes	P	Protein rigor mortis
ruditapes_c23406	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein rigor mortis
ruditapes_c23406	"molting cycle, chitin-based cuticle"	other biological processes	P	Protein rigor mortis
ruditapes_c23406	multicellular organismal development	developmental processes	P	Protein rigor mortis
ruditapes_c23406	"transcription, DNA-dependent"	RNA metabolism	P	Protein rigor mortis
ruditapes_c21221	sensory perception of smell	other biological processes	P	Guanine nucleotide-binding protein alpha-17 subunit (Odorant response abnormal protein 3)
ruditapes_c21221	G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein alpha-17 subunit (Odorant response abnormal protein 3)
ruditapes_c21221	chemotaxis	other biological processes	P	Guanine nucleotide-binding protein alpha-17 subunit (Odorant response abnormal protein 3)
ruditapes_c21221	response to stimulus	other biological processes	P	Guanine nucleotide-binding protein alpha-17 subunit (Odorant response abnormal protein 3)
ruditapes_c21221	signal transduction	signal transduction	P	Guanine nucleotide-binding protein alpha-17 subunit (Odorant response abnormal protein 3)
ruditapes_c19724	proteolysis	protein metabolism	P	Crustapain (EC 3.4.22.-) (NsCys)
ruditapes_c19724	digestion	other biological processes	P	Crustapain (EC 3.4.22.-) (NsCys)
ruditapes_c19724	collagen catabolic process	other metabolic processes	P	Crustapain (EC 3.4.22.-) (NsCys)
ruditapes_c19724	protein catabolic process	protein metabolism	P	Crustapain (EC 3.4.22.-) (NsCys)
ruditapes_c20515	oxidation reduction	other metabolic processes	P	Superoxide-generating NADPH oxidase heavy chain subunit B (EC 1.-.-.-) (NADPH oxidase B) (Superoxide-generating NADPH oxidase flavocytochrome B)
ruditapes_c20515	sorocarp development	stress response	P	Superoxide-generating NADPH oxidase heavy chain subunit B (EC 1.-.-.-) (NADPH oxidase B) (Superoxide-generating NADPH oxidase flavocytochrome B)
ruditapes_c20515	sorocarp development	developmental processes	P	Superoxide-generating NADPH oxidase heavy chain subunit B (EC 1.-.-.-) (NADPH oxidase B) (Superoxide-generating NADPH oxidase flavocytochrome B)
ruditapes_c20515	superoxide anion generation	other metabolic processes	P	Superoxide-generating NADPH oxidase heavy chain subunit B (EC 1.-.-.-) (NADPH oxidase B) (Superoxide-generating NADPH oxidase flavocytochrome B)
ruditapes_c20515	electron transport chain	other metabolic processes	P	Superoxide-generating NADPH oxidase heavy chain subunit B (EC 1.-.-.-) (NADPH oxidase B) (Superoxide-generating NADPH oxidase flavocytochrome B)
ruditapes_c20515	transport	transport	P	Superoxide-generating NADPH oxidase heavy chain subunit B (EC 1.-.-.-) (NADPH oxidase B) (Superoxide-generating NADPH oxidase flavocytochrome B)
ruditapes_c20515	sporulation resulting in formation of a cellular spore	other biological processes	P	Superoxide-generating NADPH oxidase heavy chain subunit B (EC 1.-.-.-) (NADPH oxidase B) (Superoxide-generating NADPH oxidase flavocytochrome B)
ruditapes_c11354	glutamate biosynthetic process	other metabolic processes	P	"Proline dehydrogenase 1, mitochondrial (EC 1.5.99.8) (Proline oxidase)"
ruditapes_c11354	proline metabolic process	other metabolic processes	P	"Proline dehydrogenase 1, mitochondrial (EC 1.5.99.8) (Proline oxidase)"
ruditapes_c11354	oxidation reduction	other metabolic processes	P	"Proline dehydrogenase 1, mitochondrial (EC 1.5.99.8) (Proline oxidase)"
ruditapes_c11354	proline catabolic process	other metabolic processes	P	"Proline dehydrogenase 1, mitochondrial (EC 1.5.99.8) (Proline oxidase)"
ruditapes_c22816	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase DDB
ruditapes_c22816	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase DDB
ruditapes_s36179	multicellular organismal development	developmental processes	P	Countin-3
ruditapes_s38213	multicellular organismal development	developmental processes	P	Countin-3
ruditapes_c24853	protein import into nucleus	transport	P	Nuclear transport factor 2 (NTF-2)
ruditapes_c24853	protein transport	transport	P	Nuclear transport factor 2 (NTF-2)
ruditapes_c24853	transport	transport	P	Nuclear transport factor 2 (NTF-2)
ruditapes_c19043	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein HIRA
ruditapes_c19043	"transcription, DNA-dependent"	RNA metabolism	P	Protein HIRA
ruditapes_c19043	chromatin modification	cell organization and biogenesis	P	Protein HIRA
ruditapes_c19043	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein HIRA
ruditapes_c30393	positive regulation of GTPase activity	other biological processes	P	Rho GTPase-activating protein gacFF (GTPase activating factor for raC protein FF)
ruditapes_c30393	signal transduction	signal transduction	P	Rho GTPase-activating protein gacFF (GTPase activating factor for raC protein FF)
ruditapes2_lrc5384	multicellular organismal development	developmental processes	P	Countin-1
ruditapes_lrc35197	glucose homeostasis	other biological processes	P	Countin-1
ruditapes_c1392	glucose homeostasis	other biological processes	P	Countin-1
ruditapes2_c5351	multicellular organismal development	developmental processes	P	Countin-1
ruditapes2_c3186	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes_c1392	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes_c6299	multicellular organismal development	developmental processes	P	Countin-1
ruditapes_lrc38510	multicellular organismal development	developmental processes	P	Countin-1
ruditapes_c1392	cell motion	other biological processes	P	Countin-1
ruditapes_c1392	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes2_c3831	glucose homeostasis	other biological processes	P	Countin-1
ruditapes2_c5351	glucose homeostasis	other biological processes	P	Countin-1
ruditapes2_lrc5384	signal transduction	signal transduction	P	Countin-1
ruditapes2_c3186	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes_c35821	multicellular organismal development	developmental processes	P	Countin-1
ruditapes2_lrc5384	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes2_lrc5185	multicellular organismal development	developmental processes	P	Countin-1
ruditapes2_c5351	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes_lrc35197	cell motion	other biological processes	P	Countin-1
ruditapes_c38238	cell motion	other biological processes	P	Countin-1
ruditapes2_c5351	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_lrc35197	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes_lrc35197	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes2_lrc5247	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes2_lrc5384	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes2_lrc5384	glucose homeostasis	other biological processes	P	Countin-1
ruditapes_c2732	multicellular organismal development	developmental processes	P	Countin-1
ruditapes_c38238	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes2_lrc5247	cell motion	other biological processes	P	Countin-1
ruditapes_lrc36951	multicellular organismal development	developmental processes	P	Countin-1
ruditapes2_lrc5384	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes2_c3831	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes2_c5351	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes2_c5351	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes2_c3186	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes2_c3831	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes2_c3831	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes2_lrc5384	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes2_lrc5384	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes2_lrc5384	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_c35821	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes_c35821	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes_c35821	glucose homeostasis	other biological processes	P	Countin-1
ruditapes_c1853	multicellular organismal development	developmental processes	P	Countin-1
ruditapes_c2732	glucose homeostasis	other biological processes	P	Countin-1
ruditapes2_c3831	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes_c6299	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes2_c3831	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes_c1392	multicellular organismal development	developmental processes	P	Countin-1
ruditapes2_c5351	signal transduction	signal transduction	P	Countin-1
ruditapes_lrc38510	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes_c6299	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes2_lrc5384	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes2_c3186	signal transduction	signal transduction	P	Countin-1
ruditapes2_c5351	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes2_c3831	signal transduction	signal transduction	P	Countin-1
ruditapes2_lrc5185	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes_c6299	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes2_lrc5185	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes_c6299	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes2_lrc5185	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_c35821	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes_c35821	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_lrc38510	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes_c2732	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes_c35821	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes_lrc38510	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes_lrc38510	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes2_lrc5185	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes2_lrc5384	cell motion	other biological processes	P	Countin-1
ruditapes2_lrc5185	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes2_c3186	cell motion	other biological processes	P	Countin-1
ruditapes2_c3831	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes_c38238	multicellular organismal development	developmental processes	P	Countin-1
ruditapes_c2732	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes_lrc38510	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_c2732	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_c2732	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes_c6299	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes2_c5351	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes2_lrc5185	signal transduction	signal transduction	P	Countin-1
ruditapes_c6299	glucose homeostasis	other biological processes	P	Countin-1
ruditapes_c1853	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes_c1853	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes_lrc38510	glucose homeostasis	other biological processes	P	Countin-1
ruditapes2_lrc5185	glucose homeostasis	other biological processes	P	Countin-1
ruditapes_lrc36951	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_lrc36951	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes_lrc36951	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes_lrc36951	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes2_lrc5247	multicellular organismal development	developmental processes	P	Countin-1
ruditapes2_lrc5185	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes_lrc38510	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes_lrc36951	cell motion	other biological processes	P	Countin-1
ruditapes_lrc36951	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes2_lrc5247	glucose homeostasis	other biological processes	P	Countin-1
ruditapes2_c3831	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes2_c3831	cell motion	other biological processes	P	Countin-1
ruditapes_c1853	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes_lrc38510	signal transduction	signal transduction	P	Countin-1
ruditapes_c6299	signal transduction	signal transduction	P	Countin-1
ruditapes2_c5351	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes2_c5351	cell motion	other biological processes	P	Countin-1
ruditapes_c6299	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes_c1853	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_c1392	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes_c35821	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes_c2732	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes2_c3186	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_c35821	signal transduction	signal transduction	P	Countin-1
ruditapes_c38238	glucose homeostasis	other biological processes	P	Countin-1
ruditapes_c1392	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes_c2732	signal transduction	signal transduction	P	Countin-1
ruditapes_c1853	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes_c1853	cell motion	other biological processes	P	Countin-1
ruditapes_c2732	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes2_c3186	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes2_lrc5185	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes_c1853	signal transduction	signal transduction	P	Countin-1
ruditapes_lrc35197	multicellular organismal development	developmental processes	P	Countin-1
ruditapes_c6299	cell motion	other biological processes	P	Countin-1
ruditapes_lrc36951	signal transduction	signal transduction	P	Countin-1
ruditapes2_c3186	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes2_c3186	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes_c35821	cell motion	other biological processes	P	Countin-1
ruditapes_c38238	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes_lrc36951	glucose homeostasis	other biological processes	P	Countin-1
ruditapes_c1392	signal transduction	signal transduction	P	Countin-1
ruditapes_c1392	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes2_lrc5185	cell motion	other biological processes	P	Countin-1
ruditapes_c1853	glucose homeostasis	other biological processes	P	Countin-1
ruditapes2_c3186	glucose homeostasis	other biological processes	P	Countin-1
ruditapes_c38238	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_c38238	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes_c2732	cell motion	other biological processes	P	Countin-1
ruditapes_c38238	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes2_lrc5247	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes2_lrc5247	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes_lrc38510	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes_c6299	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes2_lrc5247	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes2_lrc5247	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes_lrc38510	cell motion	other biological processes	P	Countin-1
ruditapes_lrc35197	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes2_c3186	multicellular organismal development	developmental processes	P	Countin-1
ruditapes_c35821	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes_lrc35197	signal transduction	signal transduction	P	Countin-1
ruditapes_c2732	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes_lrc35197	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes_c38238	signal transduction	signal transduction	P	Countin-1
ruditapes2_c3831	multicellular organismal development	developmental processes	P	Countin-1
ruditapes_c1853	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes_c38238	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes_lrc35197	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_c38238	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes_c1392	regulation of glycolysis	other metabolic processes	P	Countin-1
ruditapes_c1853	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes2_lrc5247	negative regulation of cGMP biosynthetic process	other metabolic processes	P	Countin-1
ruditapes_lrc35197	negative regulation of aggregate size involved in sorocarp development	stress response	P	Countin-1
ruditapes_c1392	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Countin-1
ruditapes_lrc35197	actin filament polymerization	cell organization and biogenesis	P	Countin-1
ruditapes_lrc36951	negative regulation of cell adhesion	cell adhesion	P	Countin-1
ruditapes2_lrc5247	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes_lrc36951	regulation of glucose-6-phosphatase activity	other metabolic processes	P	Countin-1
ruditapes2_lrc5247	signal transduction	signal transduction	P	Countin-1
ruditapes_c28843	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
ruditapes_lrc38918	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
ruditapes_c28843	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
ruditapes_lrc38918	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
ruditapes_c5040	vesicle-mediated transport	transport	P	ER lumen protein retaining receptor
ruditapes_c5040	transport	transport	P	ER lumen protein retaining receptor
ruditapes_c5040	protein transport	transport	P	ER lumen protein retaining receptor
ruditapes_c5040	protein retention in ER lumen	other biological processes	P	ER lumen protein retaining receptor
ruditapes_c9812	chromatin modification	cell organization and biogenesis	P	Probable E3 ubiquitin-protein ligase bre1 (EC 6.3.2.-)
ruditapes_c18833	cell differentiation	other biological processes	P	"TNF receptor-associated protein 1 homolog, mitochondrial (TNFR-associated protein 1 homolog) (Trap1 homolog)"
ruditapes_c18833	protein folding	protein metabolism	P	"TNF receptor-associated protein 1 homolog, mitochondrial (TNFR-associated protein 1 homolog) (Trap1 homolog)"
ruditapes_c18833	sporulation resulting in formation of a cellular spore	other biological processes	P	"TNF receptor-associated protein 1 homolog, mitochondrial (TNFR-associated protein 1 homolog) (Trap1 homolog)"
ruditapes_c18833	multicellular organismal development	developmental processes	P	"TNF receptor-associated protein 1 homolog, mitochondrial (TNFR-associated protein 1 homolog) (Trap1 homolog)"
ruditapes_c18833	response to stress	stress response	P	"TNF receptor-associated protein 1 homolog, mitochondrial (TNFR-associated protein 1 homolog) (Trap1 homolog)"
ruditapes_c1649	innate immune response	stress response	P	Defensin
ruditapes_c1649	defense response	stress response	P	Defensin
ruditapes_c382	defense response to Gram-positive bacterium	stress response	P	Defensin
ruditapes_c1649	defense response to bacterium	stress response	P	Defensin
ruditapes_c1649	defense response to Gram-positive bacterium	stress response	P	Defensin
ruditapes_c382	defense response to Gram-negative bacterium	stress response	P	Defensin
ruditapes_c382	innate immune response	stress response	P	Defensin
ruditapes_c382	defense response	stress response	P	Defensin
ruditapes_c1649	defense response to Gram-negative bacterium	stress response	P	Defensin
ruditapes_c382	defense response to bacterium	stress response	P	Defensin
ruditapes_c23422	ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase sina (EC 6.3.2.-) (Seven in absentia homolog) (SmSINA)
ruditapes_c23422	multicellular organismal development	developmental processes	P	E3 ubiquitin-protein ligase sina (EC 6.3.2.-) (Seven in absentia homolog) (SmSINA)
ruditapes_c23422	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase sina (EC 6.3.2.-) (Seven in absentia homolog) (SmSINA)
ruditapes_c343	defense response	stress response	P	Big defensin (Defensin)
ruditapes_c343	defense response to Gram-positive bacterium	stress response	P	Big defensin (Defensin)
ruditapes_c343	killing of cells of another organism	other biological processes	P	Big defensin (Defensin)
ruditapes_c343	defense response to bacterium	stress response	P	Big defensin (Defensin)
ruditapes_c343	defense response to Gram-negative bacterium	stress response	P	Big defensin (Defensin)
ruditapes_c343	defense response to fungus	stress response	P	Big defensin (Defensin)
ruditapes_c30253	multicellular organismal development	developmental processes	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes_c30253	sodium ion transport	transport	P	Zygote arrest protein 1 (Oocyte-specific maternal effect factor)
ruditapes_c6255	cell division	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1400	cell adhesion	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c6255	cell proliferation	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c3574	cell cycle	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c23195	trypsinogen activation	protein metabolism	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c6255	"substrate-bound cell migration, cell attachment to substrate"	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c3574	"substrate-bound cell migration, cell attachment to substrate"	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c15163	hormone-mediated signaling	signal transduction	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c15163	cell division	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1004	cell adhesion	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c3574	cell division	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c3574	cell proliferation	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c23195	cell adhesion	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1400	cell cycle	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1400	cell proliferation	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c15163	"substrate-bound cell migration, cell attachment to substrate"	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c6255	cell adhesion	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c3574	trypsinogen activation	protein metabolism	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c15163	cell proliferation	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1400	cell division	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c23195	"substrate-bound cell migration, cell attachment to substrate"	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1004	cell cycle	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1400	trypsinogen activation	protein metabolism	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c15163	trypsinogen activation	protein metabolism	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c3574	hormone-mediated signaling	signal transduction	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1400	"substrate-bound cell migration, cell attachment to substrate"	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c23195	cell division	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c6255	cell cycle	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1004	cell division	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c3574	cell adhesion	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1400	hormone-mediated signaling	signal transduction	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c23195	cell cycle	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1004	"substrate-bound cell migration, cell attachment to substrate"	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c15163	cell cycle	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1004	cell proliferation	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c6255	hormone-mediated signaling	signal transduction	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c23195	cell proliferation	cell cycle and proliferation	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c6255	trypsinogen activation	protein metabolism	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c23195	hormone-mediated signaling	signal transduction	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1004	hormone-mediated signaling	signal transduction	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes_c15163	cell adhesion	cell adhesion	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c1004	trypsinogen activation	protein metabolism	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Transmembrane protein UO-44)
ruditapes2_c384	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 13
ruditapes2_c384	transport	transport	P	ATP-binding cassette sub-family A member 13
ruditapes_c6634	transport	transport	P	ATP-binding cassette sub-family A member 13
ruditapes_c6634	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 13
ruditapes_c23150	synaptic vesicle priming	transport	P	Calcium-dependent secretion activator 2 (Calcium-dependent activator protein for secretion 2) (CAPS-2)
ruditapes_c23150	synaptic vesicle priming	cell organization and biogenesis	P	Calcium-dependent secretion activator 2 (Calcium-dependent activator protein for secretion 2) (CAPS-2)
ruditapes_c23150	exocytosis	transport	P	Calcium-dependent secretion activator 2 (Calcium-dependent activator protein for secretion 2) (CAPS-2)
ruditapes_c23150	transport	transport	P	Calcium-dependent secretion activator 2 (Calcium-dependent activator protein for secretion 2) (CAPS-2)
ruditapes_c23150	positive regulation of exocytosis	transport	P	Calcium-dependent secretion activator 2 (Calcium-dependent activator protein for secretion 2) (CAPS-2)
ruditapes_c23150	protein transport	transport	P	Calcium-dependent secretion activator 2 (Calcium-dependent activator protein for secretion 2) (CAPS-2)
ruditapes_c23150	synaptic vesicle priming	cell-cell signaling	P	Calcium-dependent secretion activator 2 (Calcium-dependent activator protein for secretion 2) (CAPS-2)
ruditapes_c24023	GPI anchor biosynthetic process	protein metabolism	P	GPI mannosyltransferase 4 (EC 2.4.1.-) (GPI mannosyltransferase IV) (GPI-MT-IV) (Phosphatidylinositol-glycan biosynthesis class Z protein) (PIG-Z) (SMP3 homolog) (hSMP3)
ruditapes_c15841	determination of left/right symmetry	developmental processes	P	Rotatin
ruditapes_c15841	multicellular organismal development	developmental processes	P	Rotatin
ruditapes2_c2143	negative regulation of phosphatase activity	other metabolic processes	P	Protein phosphatase 1 regulatory subunit 27 (Dysferlin-interacting protein 1) (Toonin)
ruditapes2_c65	protein tetramerization	cell organization and biogenesis	P	Myotubularin-related protein 13 (SET-binding factor 2)
ruditapes2_c65	dephosphorylation	other metabolic processes	P	Myotubularin-related protein 13 (SET-binding factor 2)
ruditapes2_c65	regulation of catalytic activity	other biological processes	P	Myotubularin-related protein 13 (SET-binding factor 2)
ruditapes2_c65	myelination	developmental processes	P	Myotubularin-related protein 13 (SET-binding factor 2)
ruditapes_c29589	Toll signaling pathway	signal transduction	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	MyD88-independent toll-like receptor signaling pathway	signal transduction	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	MyD88-independent toll-like receptor signaling pathway	stress response	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	I-kappaB kinase/NF-kappaB cascade	signal transduction	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	innate immune response	stress response	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	toll-like receptor signaling pathway	signal transduction	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	toll-like receptor signaling pathway	stress response	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	signal transduction	signal transduction	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	inflammatory response	stress response	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	toll-like receptor 1 signaling pathway	signal transduction	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	toll-like receptor 1 signaling pathway	stress response	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	MyD88-dependent toll-like receptor signaling pathway	stress response	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	toll-like receptor 4 signaling pathway	signal transduction	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	toll-like receptor 4 signaling pathway	stress response	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	toll-like receptor 2 signaling pathway	signal transduction	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c29589	toll-like receptor 2 signaling pathway	stress response	P	TIR domain-containing adapter molecule 2 (TICAM-2) (Putative NF-kappa-B-activating protein 502) (TRIF-related adapter molecule) (Toll-like receptor adaptor protein 3) (Toll/interleukin-1 receptor domain-containing protein) (MyD88-4)
ruditapes_c13630	protein polyubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase DZIP3 (EC 6.3.2.-) (DAZ-interacting protein 3) (RNA-binding ubiquitin ligase of 138 kDa) (hRUL138)
ruditapes_c24935	positive regulation of angiogenesis	developmental processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2)
ruditapes_c24935	eye development	developmental processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2)
ruditapes_c24935	protein amino acid phosphorylation	protein metabolism	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2)
ruditapes_c24935	apoptosis	death	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2)
ruditapes_c24935	"transcription, DNA-dependent"	RNA metabolism	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2)
ruditapes_c24935	regulation of tumor necrosis factor-mediated signaling pathway	signal transduction	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2)
ruditapes_c24935	definitive hemopoiesis	developmental processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2)
ruditapes_c24935	phosphorylation	other metabolic processes	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2)
ruditapes_c24935	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeodomain-interacting protein kinase 1 (EC 2.7.11.1) (Nuclear body-associated kinase 2)
ruditapes_s32800	interspecies interaction between organisms	other biological processes	P	Cell cycle link protein (Clink)
ruditapes2_lrc5321	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 4 (PPIase) (EC 5.2.1.8) (Rotamase)
ruditapes2_lrc5321	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 4 (PPIase) (EC 5.2.1.8) (Rotamase)
ruditapes_c5684	autophagy	other metabolic processes	P	Autophagy-related protein 2
ruditapes_c5684	transport	transport	P	Autophagy-related protein 2
ruditapes_c5684	protein transport	transport	P	Autophagy-related protein 2
ruditapes_lrc32472	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes2_c1226	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_lrc32472	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_lrc32472	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes2_c1226	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes2_c1226	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes_c21202	intracellular protein transport	transport	P	Protein transport protein SEC24-1
ruditapes_c21202	protein transport	transport	P	Protein transport protein SEC24-1
ruditapes_c21202	transport	transport	P	Protein transport protein SEC24-1
ruditapes_c21202	vesicle-mediated transport	transport	P	Protein transport protein SEC24-1
ruditapes_c21202	ER to Golgi vesicle-mediated transport	transport	P	Protein transport protein SEC24-1
ruditapes_c32928	superoxide metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c32928	oxidation reduction	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes2_c1261	oxidation reduction	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes2_c1261	superoxide metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c15622	DNA catabolic process	DNA metabolism	P	Exodeoxyribonuclease 7 large subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit)
ruditapes_c10724	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c10724	biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c10724	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase)
ruditapes_c5814	cell division	other biological processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c5814	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c5814	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c5814	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c5814	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c5814	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_lrc4615	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes2_lrc4615	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes2_lrc4615	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c15539	transport	transport	P	Multidrug resistance protein MdtL
ruditapes_c15539	transmembrane transport	transport	P	Multidrug resistance protein MdtL
ruditapes_c23691	ATP catabolic process	other metabolic processes	P	Putative ABC transporter ATP-binding protein VPA1482 (EC 3.6.3.-)
ruditapes_c23691	transport	transport	P	Putative ABC transporter ATP-binding protein VPA1482 (EC 3.6.3.-)
ruditapes_c31313	carbohydrate metabolic process	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_c31313	pentose-phosphate shunt	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_c6744	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c6744	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	other metabolic processes	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c6744	metabolic process	other metabolic processes	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c6744	phosphorylation	other metabolic processes	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes_c6744	phospholipid biosynthetic process	other metabolic processes	P	Probable lipid kinase YegS-like (EC 2.7.1.-)
ruditapes2_c2651	glutamine metabolic process	other metabolic processes	P	Glutaminase (EC 3.5.1.2)
ruditapes2_c879	cellular amino acid biosynthetic process	other metabolic processes	P	Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS) (NAGS)
ruditapes2_c879	arginine biosynthetic process	other metabolic processes	P	Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS) (NAGS)
ruditapes_c28375	oxidation reduction	other metabolic processes	P	tRNA-dihydrouridine synthase C (EC 1.-.-.-)
ruditapes_c28375	tRNA processing	RNA metabolism	P	tRNA-dihydrouridine synthase C (EC 1.-.-.-)
ruditapes_c8546	rRNA methylation	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.178) (16S rRNA m5C1407 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmF)
ruditapes_c8546	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.178) (16S rRNA m5C1407 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmF)
ruditapes_c8546	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.178) (16S rRNA m5C1407 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmF)
ruditapes2_c2994	phosphorylation	other metabolic processes	P	N-acetyl-D-glucosamine kinase (EC 2.7.1.59) (GlcNAc kinase)
ruditapes2_c2994	carbohydrate metabolic process	other metabolic processes	P	N-acetyl-D-glucosamine kinase (EC 2.7.1.59) (GlcNAc kinase)
ruditapes2_c2270	protein arginylation	protein metabolism	P	Putative arginyl-tRNA--protein transferase (Arginyltransferase) (R-transferase) (EC 2.3.2.8)
ruditapes_c26825	proteolysis	protein metabolism	P	Lipoprotein signal peptidase (EC 3.4.23.36) (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)
ruditapes_lrc35301	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36144	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc34062	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36160	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc32725	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc32725	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s34849	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37991	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc32880	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c1384	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5059	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5059	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s34849	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37667	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc34160	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc34160	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s39345	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35911	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37991	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36160	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36160	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc37536	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc37536	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s39152	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37667	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s39152	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s39152	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36392	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36392	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc34062	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc34062	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c1384	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37554	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37941	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37941	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35301	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35301	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s39345	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4233	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc32880	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc32880	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5059	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c1384	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5636	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36392	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c1384	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_c1384	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc3353	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s39345	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc34160	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s38207	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc32880	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc32880	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37941	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5636	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4233	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc3353	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc3353	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37554	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37554	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5636	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc32725	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc32725	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5059	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5059	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4233	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37941	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35911	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35911	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s38207	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s38207	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s34849	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4233	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s38207	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s38207	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s34849	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s34849	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37941	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc3353	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc39092	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc39092	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5139	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc37536	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc4233	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35301	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37667	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37667	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc34062	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc34062	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc3353	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc37536	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5139	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5139	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37991	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37991	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35301	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc34160	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc34160	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s39152	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s39152	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37667	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc37536	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36392	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36392	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5636	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5636	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36144	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36144	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36144	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36160	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36160	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5139	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes2_lrc5139	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc39092	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35911	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc35911	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37554	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37554	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc32725	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc36144	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc39092	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_lrc39092	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s39345	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s39345	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_s37991	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c19529	ATP catabolic process	other metabolic processes	P	Thiamine import ATP-binding protein ThiQ (EC 3.6.3.-)
ruditapes_c19529	transport	transport	P	Thiamine import ATP-binding protein ThiQ (EC 3.6.3.-)
ruditapes_c26300	metabolic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c26300	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_lrc20722	virion assembly	cell organization and biogenesis	P	Matrix protein (M protein)
ruditapes_lrc20722	interspecies interaction between organisms	other biological processes	P	Matrix protein (M protein)
ruditapes_c10808	interspecies interaction between organisms	other biological processes	P	Protein C2 (Protein L2)
ruditapes_c13435	carbohydrate biosynthetic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c13435	metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c13435	glutamine metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c13435	carbohydrate metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c24536	lipopolysaccharide biosynthetic process	other metabolic processes	P	Phosphomannomutase/phosphoglucomutase (PMM / PGM) (EC 5.4.2.2) (EC 5.4.2.8)
ruditapes_c24536	metabolic process	other metabolic processes	P	Phosphomannomutase/phosphoglucomutase (PMM / PGM) (EC 5.4.2.2) (EC 5.4.2.8)
ruditapes_c24536	alginic acid biosynthetic process	other metabolic processes	P	Phosphomannomutase/phosphoglucomutase (PMM / PGM) (EC 5.4.2.2) (EC 5.4.2.8)
ruditapes_c24536	carbohydrate metabolic process	other metabolic processes	P	Phosphomannomutase/phosphoglucomutase (PMM / PGM) (EC 5.4.2.2) (EC 5.4.2.8)
ruditapes_s39204	metabolic process	other metabolic processes	P	Acetyl-coenzyme A synthetase 1 (AcCoA synthetase 1) (Acs 1) (EC 6.2.1.1) (Acetate--CoA ligase 1) (Acyl-activating enzyme 1)
ruditapes_lrc38497	"transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional repressor NicS (Nicotinate degradation protein S)
ruditapes_lrc38497	"regulation of transcription, DNA-dependent"	RNA metabolism	P	HTH-type transcriptional repressor NicS (Nicotinate degradation protein S)
ruditapes_c16687	pyrroloquinoline quinone biosynthetic process	protein metabolism	P	Coenzyme PQQ synthesis protein D 2 (Pyrroloquinoline quinone biosynthesis protein D 2)
ruditapes_c31535	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional protein FolD 1 [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c31535	oxidation reduction	other metabolic processes	P	Bifunctional protein FolD 1 [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c31535	metabolic process	other metabolic processes	P	Bifunctional protein FolD 1 [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c31535	histidine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD 1 [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c31535	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional protein FolD 1 [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c31535	one-carbon compound metabolic process	other metabolic processes	P	Bifunctional protein FolD 1 [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c31535	methionine biosynthetic process	other metabolic processes	P	Bifunctional protein FolD 1 [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes_c31535	folic acid and derivative biosynthetic process	other metabolic processes	P	Bifunctional protein FolD 1 [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
ruditapes2_c1621	oxidation reduction	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes2_c1621	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes2_c1621	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes2_c1621	cell division	other biological processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes2_c1621	cell cycle	cell cycle and proliferation	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes2_c1621	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c18928	tRNA seleno-modification	RNA metabolism	P	tRNA 2-selenouridine synthase (EC 2.9.1.-) (Selenophosphate-dependent tRNA 2-selenouridine synthase)
ruditapes_c23029	protein transport	transport	P	Foldase protein PrsA 2 (EC 5.2.1.8)
ruditapes_c23029	protein peptidyl-prolyl isomerization	protein metabolism	P	Foldase protein PrsA 2 (EC 5.2.1.8)
ruditapes_c23029	protein folding	protein metabolism	P	Foldase protein PrsA 2 (EC 5.2.1.8)
ruditapes2_c2913	DNA repair	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2913	DNA repair	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2913	DNA recombination	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2913	response to DNA damage stimulus	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2913	SOS response	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_c22493	metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c22493	carbohydrate biosynthetic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c22493	glutamine metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c22493	carbohydrate metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c29694	deoxyribonucleotide catabolic process	other metabolic processes	P	Deoxyribose-phosphate aldolase (DERA) (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase)
ruditapes_c39431	metabolic process	other metabolic processes	P	Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) (PSAT)
ruditapes_c39431	cellular amino acid biosynthetic process	other metabolic processes	P	Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) (PSAT)
ruditapes_c39431	L-serine biosynthetic process	other metabolic processes	P	Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) (PSAT)
ruditapes_c39431	pyridoxine biosynthetic process	other metabolic processes	P	Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase) (PSAT)
ruditapes_c14483	ATP catabolic process	other metabolic processes	P	Energy-coupling factor transporter ATP-binding protein EcfA1 (ECF transporter A component EcfA1) (EC 3.6.3.-)
ruditapes_c14483	transport	transport	P	Energy-coupling factor transporter ATP-binding protein EcfA1 (ECF transporter A component EcfA1) (EC 3.6.3.-)
ruditapes2_c5982	carbohydrate metabolic process	other metabolic processes	P	Phosphoglucosamine mutase (EC 5.4.2.10)
ruditapes_c20042	fructose 6-phosphate metabolic process	other metabolic processes	P	6-phosphofructokinase (Phosphofructokinase) (EC 2.7.1.11) (Phosphohexokinase)
ruditapes_c20042	phosphorylation	other metabolic processes	P	6-phosphofructokinase (Phosphofructokinase) (EC 2.7.1.11) (Phosphohexokinase)
ruditapes_c20042	metabolic process	other metabolic processes	P	6-phosphofructokinase (Phosphofructokinase) (EC 2.7.1.11) (Phosphohexokinase)
ruditapes_c20042	glycolysis	other metabolic processes	P	6-phosphofructokinase (Phosphofructokinase) (EC 2.7.1.11) (Phosphohexokinase)
ruditapes_c2065	ATP biosynthetic process	other metabolic processes	P	V-type ATP synthase alpha chain 2 (EC 3.6.3.14) (V-ATPase subunit A 2)
ruditapes_c2065	ion transport	transport	P	V-type ATP synthase alpha chain 2 (EC 3.6.3.14) (V-ATPase subunit A 2)
ruditapes_c2065	ATP metabolic process	other metabolic processes	P	V-type ATP synthase alpha chain 2 (EC 3.6.3.14) (V-ATPase subunit A 2)
ruditapes_c2065	ATP hydrolysis coupled proton transport	transport	P	V-type ATP synthase alpha chain 2 (EC 3.6.3.14) (V-ATPase subunit A 2)
ruditapes_c2065	transport	transport	P	V-type ATP synthase alpha chain 2 (EC 3.6.3.14) (V-ATPase subunit A 2)
ruditapes_c2065	proton transport	transport	P	V-type ATP synthase alpha chain 2 (EC 3.6.3.14) (V-ATPase subunit A 2)
ruditapes_c14789	"transcription, DNA-dependent"	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c14789	"regulation of transcription, DNA-dependent"	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c14789	transcription termination	RNA metabolism	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_c14789	transcription termination	cell organization and biogenesis	P	N utilization substance protein B homolog (Protein NusB)
ruditapes_s36159	DNA replication	DNA metabolism	P	Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1)
ruditapes_c30066	evasion by virus of host immune response	stress response	P	Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
ruditapes_c30066	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
ruditapes_c30066	apoptosis	death	P	Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
ruditapes_c25647	ATP hydrolysis coupled proton transport	transport	P	V-type ATP synthase subunit E 1 (V-ATPase subunit E 1)
ruditapes_c25647	ion transport	transport	P	V-type ATP synthase subunit E 1 (V-ATPase subunit E 1)
ruditapes_c25647	transport	transport	P	V-type ATP synthase subunit E 1 (V-ATPase subunit E 1)
ruditapes_c25647	proton transport	transport	P	V-type ATP synthase subunit E 1 (V-ATPase subunit E 1)
ruditapes_c25647	ATP biosynthetic process	other metabolic processes	P	V-type ATP synthase subunit E 1 (V-ATPase subunit E 1)
ruditapes_lrc28707	translation	protein metabolism	P	50S ribosomal protein L25 (General stress protein CTC)
ruditapes_c29497	ATP catabolic process	other metabolic processes	P	Galactose/methyl galactoside import ATP-binding protein MglA (EC 3.6.3.17)
ruditapes_c29497	transport	transport	P	Galactose/methyl galactoside import ATP-binding protein MglA (EC 3.6.3.17)
ruditapes_c29497	carbohydrate transport	transport	P	Galactose/methyl galactoside import ATP-binding protein MglA (EC 3.6.3.17)
ruditapes_c29807	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c29807	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c29807	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c16669	interspecies interaction between organisms	other biological processes	P	Major capsid protein L1
ruditapes_c11591	inositol catabolic process	other metabolic processes	P	Inosose dehydratase (EC 4.2.1.44) (2-keto-myo-inositol dehydratase) (2KMI dehydratase)
ruditapes_c14006	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c14006	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c14006	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c14006	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c14006	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c14006	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c30744	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c10926	branched chain family amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c10926	cellular amino acid biosynthetic process	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c10926	oxidation reduction	other metabolic processes	P	Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacyl reductoisomerase)
ruditapes_c18772	cell wall organization	cell organization and biogenesis	P	Putative N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
ruditapes_c18772	peptidoglycan catabolic process	other metabolic processes	P	Putative N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
ruditapes_c22178	DNA replication	DNA metabolism	P	Replicative DNA helicase (EC 3.6.4.12)
ruditapes_c22178	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	Replicative DNA helicase (EC 3.6.4.12)
ruditapes_c22178	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	Replicative DNA helicase (EC 3.6.4.12)
ruditapes2_c825	translation	protein metabolism	P	30S ribosomal protein S17
ruditapes_c26994	transport	transport	P	Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Cytochrome o subunit 1) (Cytochrome o ubiquinol oxidase subunit 1) (Oxidase BO(3) subunit 1) (Ubiquinol oxidase polypeptide I)
ruditapes_c26994	proton transport	transport	P	Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Cytochrome o subunit 1) (Cytochrome o ubiquinol oxidase subunit 1) (Oxidase BO(3) subunit 1) (Ubiquinol oxidase polypeptide I)
ruditapes_c26994	aerobic respiration	other metabolic processes	P	Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Cytochrome o subunit 1) (Cytochrome o ubiquinol oxidase subunit 1) (Oxidase BO(3) subunit 1) (Ubiquinol oxidase polypeptide I)
ruditapes_c26994	ion transport	transport	P	Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Cytochrome o subunit 1) (Cytochrome o ubiquinol oxidase subunit 1) (Oxidase BO(3) subunit 1) (Ubiquinol oxidase polypeptide I)
ruditapes_c26994	electron transport chain	other metabolic processes	P	Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Cytochrome o subunit 1) (Cytochrome o ubiquinol oxidase subunit 1) (Oxidase BO(3) subunit 1) (Ubiquinol oxidase polypeptide I)
ruditapes_c26994	oxidation reduction	other metabolic processes	P	Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Cytochrome o subunit 1) (Cytochrome o ubiquinol oxidase subunit 1) (Oxidase BO(3) subunit 1) (Ubiquinol oxidase polypeptide I)
ruditapes_lrc14126	response to DNA damage stimulus	stress response	P	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)
ruditapes_lrc14126	DNA repair	stress response	P	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)
ruditapes_lrc14126	DNA repair	DNA metabolism	P	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)
ruditapes_c27961	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27961	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27961	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27961	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27961	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c20512	pseudouridine synthesis	RNA metabolism	P	Ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) (23S rRNA pseudouridine(955/2504/2580) synthase) (rRNA pseudouridylate synthase C) (rRNA-uridine isomerase C)
ruditapes_c20512	rRNA processing	RNA metabolism	P	Ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) (23S rRNA pseudouridine(955/2504/2580) synthase) (rRNA pseudouridylate synthase C) (rRNA-uridine isomerase C)
ruditapes_c20512	RNA modification	RNA metabolism	P	Ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) (23S rRNA pseudouridine(955/2504/2580) synthase) (rRNA pseudouridylate synthase C) (rRNA-uridine isomerase C)
ruditapes_c31817	ion transport	transport	P	High-affinity zinc uptake system membrane protein ZnuB
ruditapes_c31817	transport	transport	P	High-affinity zinc uptake system membrane protein ZnuB
ruditapes_c31817	zinc ion transport	transport	P	High-affinity zinc uptake system membrane protein ZnuB
ruditapes_c15816	biotin biosynthetic process	other metabolic processes	P	"Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) (7,8-diamino-pelargonic acid aminotransferase) (DAPA AT) (DAPA aminotransferase) (7,8-diaminononanoate synthase) (DANS) (Diaminopelargonic acid synthase)"
ruditapes_c26521	phosphoinositide phosphorylation	other metabolic processes	P	Inositol-1-monophosphatase (I-1-Pase) (IMPase) (Inositol-1-phosphatase) (EC 3.1.3.25)
ruditapes_c2242	ion transport	transport	P	Flagellum-specific ATP synthase (EC 3.6.3.14)
ruditapes_c2242	proton transport	transport	P	Flagellum-specific ATP synthase (EC 3.6.3.14)
ruditapes_c2242	protein secretion by the type III secretion system	transport	P	Flagellum-specific ATP synthase (EC 3.6.3.14)
ruditapes_c2242	ATP catabolic process	other metabolic processes	P	Flagellum-specific ATP synthase (EC 3.6.3.14)
ruditapes_c2242	transport	transport	P	Flagellum-specific ATP synthase (EC 3.6.3.14)
ruditapes_c2242	biosynthetic process	other metabolic processes	P	Flagellum-specific ATP synthase (EC 3.6.3.14)
ruditapes_c2242	flagellum organization	cell organization and biogenesis	P	Flagellum-specific ATP synthase (EC 3.6.3.14)
ruditapes_c2242	ATP biosynthetic process	other metabolic processes	P	Flagellum-specific ATP synthase (EC 3.6.3.14)
ruditapes_c2242	protein transport	transport	P	Flagellum-specific ATP synthase (EC 3.6.3.14)
ruditapes_c27119	transport	transport	P	Flagellar assembly protein FliH
ruditapes_c27119	flagellum organization	cell organization and biogenesis	P	Flagellar assembly protein FliH
ruditapes_c27119	ciliary or flagellar motility	other biological processes	P	Flagellar assembly protein FliH
ruditapes_c27119	protein transport	transport	P	Flagellar assembly protein FliH
ruditapes_c7921	phosphoenolpyruvate-dependent sugar phosphotransferase system	signal transduction	P	"Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I)"
ruditapes_c7921	phosphoenolpyruvate-dependent sugar phosphotransferase system	transport	P	"Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I)"
ruditapes_c7921	transport	transport	P	"Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I)"
ruditapes_c7921	phosphorylation	other metabolic processes	P	"Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I)"
ruditapes_c7921	carbohydrate transport	transport	P	"Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I)"
ruditapes_c20306	metabolic process	other metabolic processes	P	Uncharacterized protein bbp
ruditapes_lrc39009	metabolic process	other metabolic processes	P	UPF0313 protein blr7973
ruditapes2_lrc7533	metabolic process	other metabolic processes	P	UPF0313 protein blr7973
ruditapes_c16921	potassium ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c16921	transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c16921	ion transport	transport	P	Potassium-transporting ATPase A chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
ruditapes_c30302	branched chain family amino acid biosynthetic process	other metabolic processes	P	Dihydroxy-acid dehydratase 2 (DAD 2) (EC 4.2.1.9)
ruditapes_c30302	cellular amino acid biosynthetic process	other metabolic processes	P	Dihydroxy-acid dehydratase 2 (DAD 2) (EC 4.2.1.9)
ruditapes_c30302	metabolic process	other metabolic processes	P	Dihydroxy-acid dehydratase 2 (DAD 2) (EC 4.2.1.9)
ruditapes_c12923	potassium ion transport	transport	P	Probable potassium transport system protein kup 3
ruditapes_c12923	ion transport	transport	P	Probable potassium transport system protein kup 3
ruditapes_c12923	transport	transport	P	Probable potassium transport system protein kup 3
ruditapes_c21885	fatty acid biosynthetic process	other metabolic processes	P	Acyl carrier protein (ACP)
ruditapes_c21885	lipid biosynthetic process	other metabolic processes	P	Acyl carrier protein (ACP)
ruditapes_c918	pyrimidine base metabolic process	other metabolic processes	P	Putative thymidine phosphorylase (EC 2.4.2.4) (TdRPase)
ruditapes_c918	metabolic process	other metabolic processes	P	Putative thymidine phosphorylase (EC 2.4.2.4) (TdRPase)
ruditapes_c918	pyrimidine nucleoside metabolic process	other metabolic processes	P	Putative thymidine phosphorylase (EC 2.4.2.4) (TdRPase)
ruditapes_c22764	protein catabolic process	protein metabolism	P	ATP-dependent Clp protease adapter protein ClpS 1
ruditapes_c17114	pyridine nucleotide biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c17114	nicotinate nucleotide biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c17114	NAD biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c5041	pantothenate biosynthetic process	other metabolic processes	P	3-methyl-2-oxobutanoate hydroxymethyltransferase 1 (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase 1) (KPHMT 1)
ruditapes_c5041	methylation	other metabolic processes	P	3-methyl-2-oxobutanoate hydroxymethyltransferase 1 (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase 1) (KPHMT 1)
ruditapes_c13579	tRNA aminoacylation for protein translation	protein metabolism	P	Amino acid--[acyl-carrier-protein] ligase 1 (EC 6.2.1.n2) (Amino acid:[carrier-protein] ligase [AMP forming] 1) (aa:CP ligase 1) (Aminoacyl-[acyl-carrier-protein] synthetase 1) (L-glycine:[acyl-carrier-protein] ligase 1)
ruditapes_c13579	tRNA aminoacylation for protein translation	RNA metabolism	P	Amino acid--[acyl-carrier-protein] ligase 1 (EC 6.2.1.n2) (Amino acid:[carrier-protein] ligase [AMP forming] 1) (aa:CP ligase 1) (Aminoacyl-[acyl-carrier-protein] synthetase 1) (L-glycine:[acyl-carrier-protein] ligase 1)
ruditapes_lrc34097	deoxyribonucleotide catabolic process	other metabolic processes	P	Deoxyribose-phosphate aldolase (DERA) (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase)
ruditapes_s39438	deoxyribonucleotide catabolic process	other metabolic processes	P	Deoxyribose-phosphate aldolase (DERA) (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase)
ruditapes_lrc34152	deoxyribonucleotide catabolic process	other metabolic processes	P	Deoxyribose-phosphate aldolase (DERA) (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase)
ruditapes_lrc37695	deoxyribonucleotide catabolic process	other metabolic processes	P	Deoxyribose-phosphate aldolase (DERA) (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase)
ruditapes2_lrc4138	deoxyribonucleotide catabolic process	other metabolic processes	P	Deoxyribose-phosphate aldolase (DERA) (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase)
ruditapes_lrc34095	deoxyribonucleotide catabolic process	other metabolic processes	P	Deoxyribose-phosphate aldolase (DERA) (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase)
ruditapes_lrc6843	deoxyribonucleotide catabolic process	other metabolic processes	P	Deoxyribose-phosphate aldolase (DERA) (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase)
ruditapes_c25985	carbohydrate metabolic process	other metabolic processes	P	Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase)
ruditapes_c25985	metabolic process	other metabolic processes	P	Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase)
ruditapes_c25985	N-acetylglucosamine metabolic process	other metabolic processes	P	Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase)
ruditapes_c4653	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c4653	metabolic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes2_c1979	proton transport	transport	P	Putative K(+)-stimulated pyrophosphate-energized sodium pump (EC 3.6.1.1) (Membrane-bound sodium-translocating pyrophosphatase) (Pyrophosphate-energized inorganic pyrophosphatase) (Na(+)-PPase)
ruditapes2_c1979	transport	transport	P	Putative K(+)-stimulated pyrophosphate-energized sodium pump (EC 3.6.1.1) (Membrane-bound sodium-translocating pyrophosphatase) (Pyrophosphate-energized inorganic pyrophosphatase) (Na(+)-PPase)
ruditapes2_c1979	sodium ion transport	transport	P	Putative K(+)-stimulated pyrophosphate-energized sodium pump (EC 3.6.1.1) (Membrane-bound sodium-translocating pyrophosphatase) (Pyrophosphate-energized inorganic pyrophosphatase) (Na(+)-PPase)
ruditapes2_c1979	ion transport	transport	P	Putative K(+)-stimulated pyrophosphate-energized sodium pump (EC 3.6.1.1) (Membrane-bound sodium-translocating pyrophosphatase) (Pyrophosphate-energized inorganic pyrophosphatase) (Na(+)-PPase)
ruditapes_c15648	potassium ion transport	transport	P	Potassium-transporting ATPase C chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] C chain) (Potassium-binding and translocating subunit C) (Potassium-translocating ATPase C chain)
ruditapes_c15648	ion transport	transport	P	Potassium-transporting ATPase C chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] C chain) (Potassium-binding and translocating subunit C) (Potassium-translocating ATPase C chain)
ruditapes_c15648	transport	transport	P	Potassium-transporting ATPase C chain (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] C chain) (Potassium-binding and translocating subunit C) (Potassium-translocating ATPase C chain)
ruditapes_c7213	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c7213	oxidation reduction	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c29706	protein folding	protein metabolism	P	10 kDa chaperonin (GroES protein) (Protein Cpn10)
ruditapes_c18588	RNA processing	RNA metabolism	P	Uncharacterized RNA methyltransferase BT
ruditapes_c18588	RNA methylation	RNA metabolism	P	Uncharacterized RNA methyltransferase BT
ruditapes_c18588	methylation	other metabolic processes	P	Uncharacterized RNA methyltransferase BT
ruditapes_c9082	cell adhesion	cell adhesion	P	Protein sidekick-2
ruditapes_c1135	rRNA processing	RNA metabolism	P	Ribosome production factor 1 (Brix domain-containing protein 5) (Ribosome biogenesis protein RPF1)
ruditapes_c1135	ribosome biogenesis	other biological processes	P	Ribosome production factor 1 (Brix domain-containing protein 5) (Ribosome biogenesis protein RPF1)
ruditapes2_c7271	negative regulation of catalytic activity	other biological processes	P	Cysteine-rich motor neuron 1 protein (CRIM-1)
ruditapes2_c7271	regulation of cell growth	other biological processes	P	Cysteine-rich motor neuron 1 protein (CRIM-1)
ruditapes_c7966	meiosis	cell cycle and proliferation	P	F-box only protein 43 (Early mitotic inhibitor 2) (Emi1-related protein 1) (F-box protein 26) (Xerp1)
ruditapes_c31099	multicellular organismal development	developmental processes	P	Catenin delta-1 (Xp120(ctn)) (p120 catenin) (p120(ctn))
ruditapes_c31099	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Catenin delta-1 (Xp120(ctn)) (p120 catenin) (p120(ctn))
ruditapes_c31099	"transcription, DNA-dependent"	RNA metabolism	P	Catenin delta-1 (Xp120(ctn)) (p120 catenin) (p120(ctn))
ruditapes_c31099	Wnt receptor signaling pathway	signal transduction	P	Catenin delta-1 (Xp120(ctn)) (p120 catenin) (p120(ctn))
ruditapes_c31099	cell adhesion	cell adhesion	P	Catenin delta-1 (Xp120(ctn)) (p120 catenin) (p120(ctn))
ruditapes_c21441	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Myocardin-related transcription factor A (MRTF-A) (xMRTF-A)
ruditapes_c21441	"transcription, DNA-dependent"	RNA metabolism	P	Myocardin-related transcription factor A (MRTF-A) (xMRTF-A)
ruditapes_c15230	DNA damage induced protein phosphorylation	stress response	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	DNA damage induced protein phosphorylation	protein metabolism	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	regulation of double-strand break repair via homologous recombination	stress response	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	regulation of double-strand break repair via homologous recombination	DNA metabolism	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	G2/M transition DNA damage checkpoint	cell cycle and proliferation	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	peptidyl-threonine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	chromatin-mediated maintenance of transcription	RNA metabolism	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	chromatin-mediated maintenance of transcription	cell organization and biogenesis	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	DNA repair	stress response	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	DNA damage checkpoint	cell cycle and proliferation	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	DNA damage checkpoint	signal transduction	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	DNA damage checkpoint	stress response	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	double-strand break repair via homologous recombination	stress response	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	double-strand break repair via homologous recombination	DNA metabolism	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	double-strand break repair	stress response	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	double-strand break repair	DNA metabolism	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	regulation of mitotic centrosome separation	cell organization and biogenesis	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	negative regulation of mitosis	cell cycle and proliferation	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	negative regulation of mitosis	cell organization and biogenesis	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage	stress response	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage	RNA metabolism	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	G2/M transition DNA damage checkpoint	signal transduction	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	G2/M transition DNA damage checkpoint	stress response	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_c15230	regulation of mitotic centrosome separation	cell cycle and proliferation	P	Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1)
ruditapes_lrc33071	interspecies interaction between organisms	other biological processes	P	Glycoprotein G
ruditapes_c16998	interspecies interaction between organisms	other biological processes	P	Pre-glycoprotein polyprotein GP complex [Cleaved into: Stable signal peptide (SSP); Glycoprotein G1 (GP1); Glycoprotein G2 (GP2)]
ruditapes_c21939	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c21939	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c21939	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c21939	metabolic process	other metabolic processes	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c21939	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c21939	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c21939	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c21939	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c21939	viral reproduction	other biological processes	P	Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); 3C-like serine proteinase (3CLSP) (EC 3.4.21.-) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
ruditapes_c5863	biological_process	other biological processes	P	Protein FAM64A
ruditapes_lrc23588	biological_process	other biological processes	P	Beta-actin-like protein 2 (Kappa-actin)
ruditapes_c24189	chloride transport	transport	P	Calcium-activated chloride channel regulator 2 (Calcium-activated chloride channel family member 5) (mCLCA5)
ruditapes_c24189	transport	transport	P	Calcium-activated chloride channel regulator 2 (Calcium-activated chloride channel family member 5) (mCLCA5)
ruditapes_c24189	ion transport	transport	P	Calcium-activated chloride channel regulator 2 (Calcium-activated chloride channel family member 5) (mCLCA5)
ruditapes_c24189	cell adhesion	cell adhesion	P	Calcium-activated chloride channel regulator 2 (Calcium-activated chloride channel family member 5) (mCLCA5)
ruditapes2_c2168	biological_process	other biological processes	P	Protein phosphatase 1 regulatory subunit 12B (Myosin phosphatase-targeting subunit 2) (Myosin phosphatase target subunit 2)
ruditapes2_c2786	biological_process	other biological processes	P	Cytochrome c oxidase assembly factor 6 homolog
ruditapes_c13703	G-protein coupled receptor protein signaling pathway	signal transduction	P	Relaxin-3 receptor 1 (RLN3 receptor 1) (G protein-coupled receptor SALPR homolog) (Relaxin family peptide receptor 3)
ruditapes_c13703	"elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)"	signal transduction	P	Relaxin-3 receptor 1 (RLN3 receptor 1) (G protein-coupled receptor SALPR homolog) (Relaxin family peptide receptor 3)
ruditapes_c13703	signal transduction	signal transduction	P	Relaxin-3 receptor 1 (RLN3 receptor 1) (G protein-coupled receptor SALPR homolog) (Relaxin family peptide receptor 3)
ruditapes2_c1810	histone lysine methylation	protein metabolism	P	WD repeat-containing protein 92 (WD repeat-containing protein Monad)
ruditapes2_c1810	histone lysine methylation	cell organization and biogenesis	P	WD repeat-containing protein 92 (WD repeat-containing protein Monad)
ruditapes2_c1810	apoptosis	death	P	WD repeat-containing protein 92 (WD repeat-containing protein Monad)
ruditapes_c18906	positive regulation of GTPase activity	other biological processes	P	ELMO domain-containing protein 2
ruditapes_c18906	regulation of defense response to virus	stress response	P	ELMO domain-containing protein 2
ruditapes_c18906	phagocytosis	transport	P	ELMO domain-containing protein 2
ruditapes_c18906	phagocytosis	cell organization and biogenesis	P	ELMO domain-containing protein 2
ruditapes_c31919	biological_process	other biological processes	P	Leucine-rich repeat-containing protein 39
ruditapes_s33136	lipid biosynthetic process	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-3 (AMPK gamma3) (AMPK subunit gamma-3)
ruditapes_s33136	glucose transport	transport	P	5'-AMP-activated protein kinase subunit gamma-3 (AMPK gamma3) (AMPK subunit gamma-3)
ruditapes_s33136	glycogen biosynthetic process	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-3 (AMPK gamma3) (AMPK subunit gamma-3)
ruditapes2_lrc4834	fatty acid biosynthetic process	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-3 (AMPK gamma3) (AMPK subunit gamma-3)
ruditapes_s33136	fatty acid biosynthetic process	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-3 (AMPK gamma3) (AMPK subunit gamma-3)
ruditapes2_lrc4834	glycogen biosynthetic process	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-3 (AMPK gamma3) (AMPK subunit gamma-3)
ruditapes2_lrc4834	glucose transport	transport	P	5'-AMP-activated protein kinase subunit gamma-3 (AMPK gamma3) (AMPK subunit gamma-3)
ruditapes2_lrc4834	lipid biosynthetic process	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-3 (AMPK gamma3) (AMPK subunit gamma-3)
ruditapes_lrc39615	biological_process	other biological processes	P	Solute carrier family 25 member 40
ruditapes_lrc39615	transport	transport	P	Solute carrier family 25 member 40
ruditapes_lrc39615	transmembrane transport	transport	P	Solute carrier family 25 member 40
ruditapes_c36206	biological_process	other biological processes	P	BolA-like protein 2
ruditapes2_c535	biological_process	other biological processes	P	BolA-like protein 2
ruditapes2_c1395	L-alanine metabolic process	other metabolic processes	P	Alanine aminotransferase 2 (ALT2) (EC 2.6.1.2) (Glutamate pyruvate transaminase 2) (GPT 2) (Glutamic--alanine transaminase 2) (Glutamic--pyruvic transaminase 2)
ruditapes2_c1395	biosynthetic process	other metabolic processes	P	Alanine aminotransferase 2 (ALT2) (EC 2.6.1.2) (Glutamate pyruvate transaminase 2) (GPT 2) (Glutamic--alanine transaminase 2) (Glutamic--pyruvic transaminase 2)
ruditapes2_c1395	2-oxoglutarate metabolic process	other metabolic processes	P	Alanine aminotransferase 2 (ALT2) (EC 2.6.1.2) (Glutamate pyruvate transaminase 2) (GPT 2) (Glutamic--alanine transaminase 2) (Glutamic--pyruvic transaminase 2)
ruditapes2_c3607	biological_process	other biological processes	P	PC-esterase domain-containing protein 1B (Protein FAM113B)
ruditapes_s38969	protein homooligomerization	cell organization and biogenesis	P	Atlastin-1 (EC 3.6.5.-) (Spastic paraplegia 3A homolog)
ruditapes_s38969	GTP catabolic process	other metabolic processes	P	Atlastin-1 (EC 3.6.5.-) (Spastic paraplegia 3A homolog)
ruditapes_s38969	axonogenesis	developmental processes	P	Atlastin-1 (EC 3.6.5.-) (Spastic paraplegia 3A homolog)
ruditapes_s38969	axonogenesis	cell organization and biogenesis	P	Atlastin-1 (EC 3.6.5.-) (Spastic paraplegia 3A homolog)
ruditapes_s38969	endoplasmic reticulum organization	cell organization and biogenesis	P	Atlastin-1 (EC 3.6.5.-) (Spastic paraplegia 3A homolog)
ruditapes_c10550	biological_process	other biological processes	P	Transmembrane protein 179
ruditapes_c7731	biological_process	other biological processes	P	Nucleolar complex protein 4 homolog (NOC4 protein homolog) (NOC4-like protein) (Nucleolar complex-associated protein 4-like protein)
ruditapes_c1325	biological_process	other biological processes	P	Protein KIAA1199 homolog (Protein 12H19.01.T7)
ruditapes_c17349	isoleucyl-tRNA aminoacylation	protein metabolism	P	"Isoleucine--tRNA ligase, mitochondrial (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c17349	isoleucyl-tRNA aminoacylation	RNA metabolism	P	"Isoleucine--tRNA ligase, mitochondrial (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c17349	tRNA aminoacylation for protein translation	protein metabolism	P	"Isoleucine--tRNA ligase, mitochondrial (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c17349	tRNA aminoacylation for protein translation	RNA metabolism	P	"Isoleucine--tRNA ligase, mitochondrial (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c17349	translation	protein metabolism	P	"Isoleucine--tRNA ligase, mitochondrial (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c3225	biological_process	other biological processes	P	Zinc finger protein 2 (Zinc finger protein 661) (Zfp-661)
ruditapes_c3225	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 2 (Zinc finger protein 661) (Zfp-661)
ruditapes_c3225	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 2 (Zinc finger protein 661) (Zfp-661)
ruditapes_c9588	transport	transport	P	Ran-binding protein 6 (RanBP6)
ruditapes_c9588	protein transport	transport	P	Ran-binding protein 6 (RanBP6)
ruditapes_c9588	biological_process	other biological processes	P	Ran-binding protein 6 (RanBP6)
ruditapes_c4984	cation transport	transport	P	Solute carrier family 41 member 1
ruditapes_c1754	transport	transport	P	Solute carrier family 41 member 1
ruditapes_c1754	cation transport	transport	P	Solute carrier family 41 member 1
ruditapes_c4984	transport	transport	P	Solute carrier family 41 member 1
ruditapes_c4984	biological_process	other biological processes	P	Solute carrier family 41 member 1
ruditapes_c1754	ion transport	transport	P	Solute carrier family 41 member 1
ruditapes_c1754	biological_process	other biological processes	P	Solute carrier family 41 member 1
ruditapes_c4984	ion transport	transport	P	Solute carrier family 41 member 1
ruditapes_c30792	UDP-glucuronate metabolic process	other metabolic processes	P	"Chondroitin sulfate N-acetylgalactosaminyltransferase 1 (CsGalNAcT-1) (EC 2.4.1.174) (Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 1) (Beta4GalNAcT-1)"
ruditapes_c30792	chondroitin sulfate biosynthetic process	other metabolic processes	P	"Chondroitin sulfate N-acetylgalactosaminyltransferase 1 (CsGalNAcT-1) (EC 2.4.1.174) (Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 1) (Beta4GalNAcT-1)"
ruditapes_c30792	UDP-N-acetylgalactosamine metabolic process	other metabolic processes	P	"Chondroitin sulfate N-acetylgalactosaminyltransferase 1 (CsGalNAcT-1) (EC 2.4.1.174) (Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 1) (Beta4GalNAcT-1)"
ruditapes_c30792	"chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process"	other metabolic processes	P	"Chondroitin sulfate N-acetylgalactosaminyltransferase 1 (CsGalNAcT-1) (EC 2.4.1.174) (Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 1) (Beta4GalNAcT-1)"
ruditapes_c31652	Wnt receptor signaling pathway	signal transduction	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c31652	mitosis	cell cycle and proliferation	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c31652	mitosis	cell organization and biogenesis	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c31652	protein amino acid phosphorylation	protein metabolism	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c31652	cell division	other biological processes	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c31652	cell cycle	cell cycle and proliferation	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c31652	cell morphogenesis	cell organization and biogenesis	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c31652	phosphorylation	other metabolic processes	P	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)
ruditapes_c4804	biological_process	other biological processes	P	Elongator complex protein 6 (Protein TMEM103)
ruditapes2_c2918	methylation	other metabolic processes	P	Zinc finger CCHC domain-containing protein 4
ruditapes2_c2918	biological_process	other biological processes	P	Zinc finger CCHC domain-containing protein 4
ruditapes_c23908	protein transport	transport	P	Protein dopey-1
ruditapes_c23908	biological_process	other biological processes	P	Protein dopey-1
ruditapes_c23908	transport	transport	P	Protein dopey-1
ruditapes_c31914	calcium ion transport	transport	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	thermoception	other biological processes	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	transmembrane calcium ion transport	transport	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	response to pain	stress response	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	transport	transport	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	detection of chemical stimulus involved in sensory perception of pain	other biological processes	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	response to stimulus	other biological processes	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	ion transport	transport	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	response to hydrogen peroxide	stress response	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	transmembrane transport	transport	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	response to cold	stress response	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	response to drug	other biological processes	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c31914	detection of mechanical stimulus involved in sensory perception of pain	other biological processes	P	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1)
ruditapes_c1272	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c1272	positive regulation of cell-substrate adhesion	cell adhesion	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c2697	limb development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c2697	multicellular organismal development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c2697	extracellular matrix organization	cell organization and biogenesis	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c2697	eye development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c11389	multicellular organismal development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c11389	limb development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c19900	eye development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c2697	cell differentiation	other biological processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c2697	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c11389	extracellular matrix organization	cell organization and biogenesis	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c19900	multicellular organismal development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c1272	limb development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c1272	extracellular matrix organization	cell organization and biogenesis	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c11389	eye development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c19900	limb development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c1272	multicellular organismal development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c19900	extracellular matrix organization	cell organization and biogenesis	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c2697	positive regulation of cell-substrate adhesion	cell adhesion	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c11389	cell differentiation	other biological processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c1272	eye development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c19900	cell differentiation	other biological processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c19900	positive regulation of cell-substrate adhesion	cell adhesion	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c11389	positive regulation of cell-substrate adhesion	cell adhesion	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c11389	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c19900	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c1272	cell differentiation	other biological processes	P	SPARC-related modular calcium-binding protein 1 (SPARC-related gene protein) (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c28479	pyruvate metabolic process	other metabolic processes	P	"NADP-dependent malic enzyme, mitochondrial (NADP-ME) (EC 1.1.1.40) (Malic enzyme 3)"
ruditapes_c28479	malate metabolic process	other metabolic processes	P	"NADP-dependent malic enzyme, mitochondrial (NADP-ME) (EC 1.1.1.40) (Malic enzyme 3)"
ruditapes_c28479	oxidation reduction	other metabolic processes	P	"NADP-dependent malic enzyme, mitochondrial (NADP-ME) (EC 1.1.1.40) (Malic enzyme 3)"
ruditapes_c16980	response to DNA damage stimulus	stress response	P	ATR-interacting protein (ATM and Rad3-related-interacting protein)
ruditapes_c16980	DNA repair	stress response	P	ATR-interacting protein (ATM and Rad3-related-interacting protein)
ruditapes_c16980	DNA repair	DNA metabolism	P	ATR-interacting protein (ATM and Rad3-related-interacting protein)
ruditapes_c10471	tRNA aminoacylation for protein translation	protein metabolism	P	"Leucine--tRNA ligase, cytoplasmic (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)"
ruditapes_c10471	tRNA aminoacylation for protein translation	RNA metabolism	P	"Leucine--tRNA ligase, cytoplasmic (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)"
ruditapes_c10471	translation	protein metabolism	P	"Leucine--tRNA ligase, cytoplasmic (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)"
ruditapes_c10471	leucyl-tRNA aminoacylation	protein metabolism	P	"Leucine--tRNA ligase, cytoplasmic (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)"
ruditapes_c10471	leucyl-tRNA aminoacylation	RNA metabolism	P	"Leucine--tRNA ligase, cytoplasmic (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)"
ruditapes_c8591	fatty acid metabolic process	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c8591	lipid metabolic process	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c8591	response to drug	other biological processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c8591	response to insulin stimulus	other biological processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c8591	fatty acid beta-oxidation	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c8591	metabolic process	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c8591	oxidation reduction	other metabolic processes	P	"Trifunctional enzyme subunit alpha, mitochondrial (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)]"
ruditapes_c7967	ion transport	transport	P	Magnesium transporter NIPA3 (NIPA-like protein 1) (Non-imprinted in Prader-Willi/Angelman syndrome region protein 3 homolog)
ruditapes_c7967	magnesium ion transport	transport	P	Magnesium transporter NIPA3 (NIPA-like protein 1) (Non-imprinted in Prader-Willi/Angelman syndrome region protein 3 homolog)
ruditapes_c7967	transport	transport	P	Magnesium transporter NIPA3 (NIPA-like protein 1) (Non-imprinted in Prader-Willi/Angelman syndrome region protein 3 homolog)
ruditapes_c12254	biological_process	other biological processes	P	C-type lectin domain family 4 member G
ruditapes_c30452	biological_process	other biological processes	P	C-type lectin domain family 4 member G
ruditapes_c10705	biological_process	other biological processes	P	C-type lectin domain family 4 member G
ruditapes_c7277	asparaginyl-tRNA aminoacylation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c7277	asparaginyl-tRNA aminoacylation	RNA metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes2_c3018	translation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c25724	translation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes2_c3018	asparaginyl-tRNA aminoacylation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes2_c3018	tRNA aminoacylation for protein translation	RNA metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c7277	translation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c25724	asparaginyl-tRNA aminoacylation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c25724	asparaginyl-tRNA aminoacylation	RNA metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes2_c3018	asparaginyl-tRNA aminoacylation	RNA metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c7277	tRNA aminoacylation for protein translation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c7277	tRNA aminoacylation for protein translation	RNA metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c25724	tRNA aminoacylation for protein translation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c25724	tRNA aminoacylation for protein translation	RNA metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes2_c3018	tRNA aminoacylation for protein translation	protein metabolism	P	"Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS)"
ruditapes_c2021	biological_process	other biological processes	P	Protein FAM154B
ruditapes_lrc17752	tRNA processing	RNA metabolism	P	tRNA (uracil(54)-C(5))-methyltransferase homolog (EC 2.1.1.35) (TRM2 homolog)
ruditapes_lrc17752	biological_process	other biological processes	P	tRNA (uracil(54)-C(5))-methyltransferase homolog (EC 2.1.1.35) (TRM2 homolog)
ruditapes_lrc17752	methylation	other metabolic processes	P	tRNA (uracil(54)-C(5))-methyltransferase homolog (EC 2.1.1.35) (TRM2 homolog)
ruditapes_c453	biological_process	other biological processes	P	Uncharacterized protein C12orf69 homolog
ruditapes_c27147	biological_process	other biological processes	P	Echinoderm microtubule-associated protein-like 5 (EMAP-5)
ruditapes_c1772	biological_process	other biological processes	P	"Protein ACN9 homolog, mitochondrial"
ruditapes_c385	biological_process	other biological processes	P	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)
ruditapes_c18987	biological_process	other biological processes	P	Kelch-like protein 38
ruditapes_c37018	blood vessel remodeling	developmental processes	P	Protein polybromo-1 (BRG1-associated factor 180) (BAF180)
ruditapes_c37018	"transcription, DNA-dependent"	RNA metabolism	P	Protein polybromo-1 (BRG1-associated factor 180) (BAF180)
ruditapes_c37018	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein polybromo-1 (BRG1-associated factor 180) (BAF180)
ruditapes_c37018	chromatin modification	cell organization and biogenesis	P	Protein polybromo-1 (BRG1-associated factor 180) (BAF180)
ruditapes_c37018	heart morphogenesis	developmental processes	P	Protein polybromo-1 (BRG1-associated factor 180) (BAF180)
ruditapes_c37018	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein polybromo-1 (BRG1-associated factor 180) (BAF180)
ruditapes_c37018	heart development	developmental processes	P	Protein polybromo-1 (BRG1-associated factor 180) (BAF180)
ruditapes_c37018	negative regulation of cell proliferation	cell cycle and proliferation	P	Protein polybromo-1 (BRG1-associated factor 180) (BAF180)
ruditapes_c37018	placenta development	developmental processes	P	Protein polybromo-1 (BRG1-associated factor 180) (BAF180)
ruditapes2_c68	biological_process	other biological processes	P	Serine protease inhibitor Kazal-type 6
ruditapes2_c68	negative regulation of peptidase activity	other biological processes	P	Serine protease inhibitor Kazal-type 6
ruditapes_c4313	mRNA processing	RNA metabolism	P	Serine/arginine repetitive matrix protein 2
ruditapes_c4313	RNA splicing	RNA metabolism	P	Serine/arginine repetitive matrix protein 2
ruditapes_c4313	biological_process	other biological processes	P	Serine/arginine repetitive matrix protein 2
ruditapes_c17948	RNA metabolic process	RNA metabolism	P	Leukocyte receptor cluster member 9
ruditapes_c17948	biological_process	other biological processes	P	Leukocyte receptor cluster member 9
ruditapes_c17542	biological_process	other biological processes	P	Periodic tryptophan protein 2 homolog
ruditapes2_c1805	isoleucyl-tRNA aminoacylation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes2_c1805	isoleucyl-tRNA aminoacylation	RNA metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes2_c1805	translation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes2_c1805	tRNA aminoacylation for protein translation	protein metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes2_c1805	tRNA aminoacylation for protein translation	RNA metabolism	P	"Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)"
ruditapes2_c5648	protein repair	protein metabolism	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes_lrc30054	oxidation reduction	other metabolic processes	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes_c1869	oxidation reduction	other metabolic processes	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes_c6387	protein repair	protein metabolism	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes2_c4594	protein repair	protein metabolism	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes_lrc36507	oxidation reduction	other metabolic processes	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes2_c5648	oxidation reduction	other metabolic processes	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes_c6387	oxidation reduction	other metabolic processes	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes2_c5239	protein repair	protein metabolism	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes_lrc36507	protein repair	protein metabolism	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes_lrc30054	protein repair	protein metabolism	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes2_c4594	oxidation reduction	other metabolic processes	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes_c1869	protein repair	protein metabolism	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes2_c5239	oxidation reduction	other metabolic processes	P	"Methionine-R-sulfoxide reductase B3, mitochondrial (MsrB3) (EC 1.8.4.-)"
ruditapes2_c2397	biological_process	other biological processes	P	Low-density lipoprotein receptor-related protein 12 (LRP-12)
ruditapes2_c2397	endocytosis	transport	P	Low-density lipoprotein receptor-related protein 12 (LRP-12)
ruditapes2_c2397	endocytosis	cell organization and biogenesis	P	Low-density lipoprotein receptor-related protein 12 (LRP-12)
ruditapes_c24265	Leydig cell differentiation	developmental processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	luteinization	developmental processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	ruffle organization	cell organization and biogenesis	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	platelet-derived growth factor receptor signaling pathway	signal transduction	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	spermatogenesis	other biological processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	cellular response to hydrogen peroxide	stress response	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	palate development	other biological processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	skeletal system morphogenesis	developmental processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	post-embryonic development	developmental processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	establishment of protein localization	other biological processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	negative regulation of protein kinase B signaling cascade	signal transduction	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	estrogen metabolic process	other metabolic processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	B cell receptor signaling pathway	signal transduction	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	androgen metabolic process	other metabolic processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	face morphogenesis	other biological processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	female gonad development	developmental processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	multicellular organism growth	other biological processes	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c24265	phosphoinositide 3-kinase cascade	signal transduction	P	Pleckstrin homology domain-containing family A member 1 (PH domain-containing family A member 1) (Tandem PH domain-containing protein 1) (TAPP-1)
ruditapes_c31884	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 43 (EC 3.4.19.12) (Deubiquitinating enzyme 43) (Ubiquitin thioesterase 43) (Ubiquitin-specific-processing protease 43)
ruditapes_c31884	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 43 (EC 3.4.19.12) (Deubiquitinating enzyme 43) (Ubiquitin thioesterase 43) (Ubiquitin-specific-processing protease 43)
ruditapes_c31884	biological_process	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 43 (EC 3.4.19.12) (Deubiquitinating enzyme 43) (Ubiquitin thioesterase 43) (Ubiquitin-specific-processing protease 43)
ruditapes_c14273	biological_process	other biological processes	P	Interferon-induced protein 44 (Microtubule-associated protein 44)
ruditapes_lrc29965	biological_process	other biological processes	P	Interferon-induced protein 44 (Microtubule-associated protein 44)
ruditapes_c15672	biological_process	other biological processes	P	Interferon-induced protein 44 (Microtubule-associated protein 44)
ruditapes_c22057	biological_process	other biological processes	P	Interferon-induced protein 44 (Microtubule-associated protein 44)
ruditapes_c27265	biological_process	other biological processes	P	TPR and ankyrin repeat-containing protein 1 (Lupus brain antigen 1)
ruditapes_c24734	biological_process	other biological processes	P	TPR and ankyrin repeat-containing protein 1 (Lupus brain antigen 1)
ruditapes_c2753	response to lead ion	other biological processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c2753	response to glucagon stimulus	other biological processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c2753	liver development	developmental processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c2753	L-phenylalanine catabolic process	other metabolic processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c2753	oxidation reduction	other metabolic processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c2753	tetrahydrobiopterin biosynthetic process	other metabolic processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c2753	response to aluminum ion	other biological processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c2753	metabolic process	other metabolic processes	P	Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase)
ruditapes_c26664	biological_process	other biological processes	P	Barrier-to-autointegration factor-like protein (BAF-L) (Barrier-to-autointegration factor 2)
ruditapes_c18390	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 38 (EC 3.4.19.12) (Deubiquitinating enzyme 38) (Ubiquitin thioesterase 38) (Ubiquitin-specific-processing protease 38)
ruditapes_c18390	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 38 (EC 3.4.19.12) (Deubiquitinating enzyme 38) (Ubiquitin thioesterase 38) (Ubiquitin-specific-processing protease 38)
ruditapes_c22416	microtubule-based movement	other biological processes	P	"Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3)"
ruditapes_c25462	microtubule-based movement	other biological processes	P	"Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3)"
ruditapes_c16441	microtubule-based movement	other biological processes	P	"Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3)"
ruditapes_c22416	biological_process	other biological processes	P	"Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3)"
ruditapes_c25462	biological_process	other biological processes	P	"Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3)"
ruditapes_c16441	biological_process	other biological processes	P	"Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3)"
ruditapes_c10746	polysaccharide metabolic process	other metabolic processes	P	"Phosphorylase b kinase regulatory subunit alpha, liver isoform (Phosphorylase kinase alpha L subunit)"
ruditapes_c10746	carbohydrate metabolic process	other metabolic processes	P	"Phosphorylase b kinase regulatory subunit alpha, liver isoform (Phosphorylase kinase alpha L subunit)"
ruditapes_c10746	glycogen metabolic process	other metabolic processes	P	"Phosphorylase b kinase regulatory subunit alpha, liver isoform (Phosphorylase kinase alpha L subunit)"
ruditapes_c25284	biological_process	other biological processes	P	Disco-interacting protein 2 homolog A (DIP2 homolog A)
ruditapes_c25284	metabolic process	other metabolic processes	P	Disco-interacting protein 2 homolog A (DIP2 homolog A)
ruditapes_c25284	multicellular organismal development	developmental processes	P	Disco-interacting protein 2 homolog A (DIP2 homolog A)
ruditapes_c11643	biological_process	other biological processes	P	Protein FAM131A
ruditapes_c32794	biological_process	other biological processes	P	C-type lectin domain family 1 member A
ruditapes_c14008	biological_process	other biological processes	P	Iron/zinc purple acid phosphatase-like protein (EC 3.1.3.2)
ruditapes_c14324	biological_process	other biological processes	P	Iron/zinc purple acid phosphatase-like protein (EC 3.1.3.2)
ruditapes_c17718	biological_process	other biological processes	P	Vacuolar protein sorting-associated protein 13C
ruditapes_c17718	protein localization	other biological processes	P	Vacuolar protein sorting-associated protein 13C
ruditapes_c19285	positive regulation of GTPase activity	other biological processes	P	"Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 (AGAP-1) (Centaurin-gamma-2) (Cnt-g2)"
ruditapes_c19285	protein transport	transport	P	"Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 (AGAP-1) (Centaurin-gamma-2) (Cnt-g2)"
ruditapes_c19285	small GTPase mediated signal transduction	signal transduction	P	"Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 (AGAP-1) (Centaurin-gamma-2) (Cnt-g2)"
ruditapes_c19285	transport	transport	P	"Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 (AGAP-1) (Centaurin-gamma-2) (Cnt-g2)"
ruditapes_c19285	regulation of ARF GTPase activity	signal transduction	P	"Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 (AGAP-1) (Centaurin-gamma-2) (Cnt-g2)"
ruditapes_c15441	transport	transport	P	Sodium leak channel non-selective protein (Voltage gated channel-like protein 1)
ruditapes_c15441	transmembrane transport	transport	P	Sodium leak channel non-selective protein (Voltage gated channel-like protein 1)
ruditapes_c15441	ion transport	transport	P	Sodium leak channel non-selective protein (Voltage gated channel-like protein 1)
ruditapes_c15441	regulation of transmembrane ion transport	transport	P	Sodium leak channel non-selective protein (Voltage gated channel-like protein 1)
ruditapes_c15441	sodium ion transport	transport	P	Sodium leak channel non-selective protein (Voltage gated channel-like protein 1)
ruditapes_c18640	transmembrane transport	transport	P	Sodium-coupled monocarboxylate transporter 1 (Electrogenic sodium monocarboxylate cotransporter) (Solute carrier family 5 member 8)
ruditapes_c18640	transport	transport	P	Sodium-coupled monocarboxylate transporter 1 (Electrogenic sodium monocarboxylate cotransporter) (Solute carrier family 5 member 8)
ruditapes_c18640	apoptosis	death	P	Sodium-coupled monocarboxylate transporter 1 (Electrogenic sodium monocarboxylate cotransporter) (Solute carrier family 5 member 8)
ruditapes_c18640	sodium ion transport	transport	P	Sodium-coupled monocarboxylate transporter 1 (Electrogenic sodium monocarboxylate cotransporter) (Solute carrier family 5 member 8)
ruditapes_c18640	ion transport	transport	P	Sodium-coupled monocarboxylate transporter 1 (Electrogenic sodium monocarboxylate cotransporter) (Solute carrier family 5 member 8)
ruditapes2_c1677	cilium axoneme assembly	cell organization and biogenesis	P	Radial spoke head protein 4 homolog A (Radial spoke head-like protein 3)
ruditapes_s38528	biological_process	other biological processes	P	Transmembrane protease serine 11G (EC 3.4.21.-) (Serine protease DESC4) [Cleaved into: Transmembrane protease serine 11G non-catalytic chain; Transmembrane protease serine 11G catalytic chain]
ruditapes_s38528	proteolysis	protein metabolism	P	Transmembrane protease serine 11G (EC 3.4.21.-) (Serine protease DESC4) [Cleaved into: Transmembrane protease serine 11G non-catalytic chain; Transmembrane protease serine 11G catalytic chain]
ruditapes_c8787	biological_process	other biological processes	P	Tetratricopeptide repeat protein 34 (TPR repeat protein 34)
ruditapes_c25397	small GTPase mediated signal transduction	signal transduction	P	Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (M-Ras-regulated Rap GEF) (MR-GEF)
ruditapes_c25397	regulation of small GTPase mediated signal transduction	signal transduction	P	Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (M-Ras-regulated Rap GEF) (MR-GEF)
ruditapes_c11501	biological_process	other biological processes	P	Leucine-rich repeat and death domain-containing protein 1
ruditapes_c11772	positive regulation of apoptosis	death	P	Adenylate cyclase type 10 (EC 4.6.1.1) (Germ cell soluble adenylyl cyclase) (sAC) (Testicular soluble adenylyl cyclase)
ruditapes_c11772	cyclic nucleotide biosynthetic process	other metabolic processes	P	Adenylate cyclase type 10 (EC 4.6.1.1) (Germ cell soluble adenylyl cyclase) (sAC) (Testicular soluble adenylyl cyclase)
ruditapes_c11772	spermatogenesis	other biological processes	P	Adenylate cyclase type 10 (EC 4.6.1.1) (Germ cell soluble adenylyl cyclase) (sAC) (Testicular soluble adenylyl cyclase)
ruditapes_c11772	cAMP biosynthetic process	other metabolic processes	P	Adenylate cyclase type 10 (EC 4.6.1.1) (Germ cell soluble adenylyl cyclase) (sAC) (Testicular soluble adenylyl cyclase)
ruditapes_c26587	biological_process	other biological processes	P	Coiled-coil domain-containing protein 79
ruditapes_c26587	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Coiled-coil domain-containing protein 79
ruditapes_c27504	cellular amino acid biosynthetic process	other metabolic processes	P	Methionine synthase reductase (MSR) (EC 1.16.1.8)
ruditapes_c27504	oxidation reduction	other metabolic processes	P	Methionine synthase reductase (MSR) (EC 1.16.1.8)
ruditapes_c27504	methionine biosynthetic process	other metabolic processes	P	Methionine synthase reductase (MSR) (EC 1.16.1.8)
ruditapes_c20158	proteolysis	protein metabolism	P	Thimet oligopeptidase (EC 3.4.24.15)
ruditapes_c20158	protein kinase cascade	signal transduction	P	Thimet oligopeptidase (EC 3.4.24.15)
ruditapes_c20158	peptide metabolic process	other metabolic processes	P	Thimet oligopeptidase (EC 3.4.24.15)
ruditapes_c10772	nitrogen compound metabolic process	other metabolic processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	androgen metabolic process	other metabolic processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	skeletal system morphogenesis	developmental processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	hemopoiesis	developmental processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	smooth muscle tissue development	developmental processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	protein amino acid ADP-ribosylation	protein metabolism	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	palate development	other biological processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	vasculogenesis	developmental processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	platelet-derived growth factor receptor signaling pathway	signal transduction	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	estrogen metabolic process	other metabolic processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	post-embryonic development	developmental processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	kidney development	developmental processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	multicellular organismal metabolic process	other metabolic processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	face morphogenesis	other biological processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c10772	female gonad development	developmental processes	P	TCDD-inducible poly [ADP-ribose] polymerase (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14)
ruditapes_c17841	proteolysis	protein metabolism	P	Dipeptidase 2 (EC 3.4.13.19) (Membrane-bound dipeptidase 2) (MBD-2)
ruditapes_c6313	biological_process	other biological processes	P	"Pentatricopeptide repeat-containing protein 1, mitochondrial"
ruditapes_c19953	biological_process	other biological processes	P	"Pentatricopeptide repeat-containing protein 1, mitochondrial"
ruditapes_c3077	iron ion homeostasis	other biological processes	P	F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat protein 5)
ruditapes_c3077	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat protein 5)
ruditapes_c3077	protein ubiquitination	protein metabolism	P	F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat protein 5)
ruditapes_c24050	cell adhesion	cell adhesion	P	Amphoterin-induced protein 3 (AMIGO-3) (Alivin-3)
ruditapes_c24050	heterophilic cell adhesion	cell adhesion	P	Amphoterin-induced protein 3 (AMIGO-3) (Alivin-3)
ruditapes_lrc24403	mitosis	cell cycle and proliferation	P	Kinetochore-associated protein 1
ruditapes_lrc24403	mitosis	cell organization and biogenesis	P	Kinetochore-associated protein 1
ruditapes_lrc24403	mitotic cell cycle checkpoint	cell cycle and proliferation	P	Kinetochore-associated protein 1
ruditapes_lrc24403	cell division	other biological processes	P	Kinetochore-associated protein 1
ruditapes_lrc24403	cell cycle	cell cycle and proliferation	P	Kinetochore-associated protein 1
ruditapes_c19138	biological_process	other biological processes	P	Transmembrane protein 145
ruditapes_c989	Wnt receptor signaling pathway	signal transduction	P	Casein kinase I isoform gamma-3 (CKI-gamma 3) (EC 2.7.11.1)
ruditapes_c989	protein amino acid phosphorylation	protein metabolism	P	Casein kinase I isoform gamma-3 (CKI-gamma 3) (EC 2.7.11.1)
ruditapes_c989	phosphorylation	other metabolic processes	P	Casein kinase I isoform gamma-3 (CKI-gamma 3) (EC 2.7.11.1)
ruditapes_c21756	biological_process	other biological processes	P	Uncharacterized protein CXorf38 homolog
ruditapes_c18389	biological_process	other biological processes	P	WD repeat-containing protein 27
ruditapes_c16959	biological_process	other biological processes	P	Cyclic GMP-AMP synthase (cGAMP synthase) (cGAS) (m-cGAS) (EC 2.7.7.-) (Mab-21 domain-containing protein 1)
ruditapes_c28863	biological_process	other biological processes	P	Uncharacterized protein CXorf57 homolog
ruditapes_c28497	"transcription, DNA-dependent"	RNA metabolism	P	Myelin expression factor 2 (MEF-2) (MyEF-2)
ruditapes2_c3969	negative regulation of BMP signaling pathway	signal transduction	P	Brorin (Brain-specific chordin-like protein) (CR (chordin-like cysteine-rich) domain-containing adhesive protein) (Cradin) (von Willebrand factor C domain-containing protein 2)
ruditapes2_c3969	positive regulation of neuron differentiation	developmental processes	P	Brorin (Brain-specific chordin-like protein) (CR (chordin-like cysteine-rich) domain-containing adhesive protein) (Cradin) (von Willebrand factor C domain-containing protein 2)
ruditapes2_c3969	positive regulation of cell-substrate adhesion	cell adhesion	P	Brorin (Brain-specific chordin-like protein) (CR (chordin-like cysteine-rich) domain-containing adhesive protein) (Cradin) (von Willebrand factor C domain-containing protein 2)
ruditapes2_lrc4019	protein localization	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_lrc33990	protein localization	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_lrc33990	apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c31239	cardiac muscle contraction	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes2_lrc4019	apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c8626	regulation of apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_s38533	signal transduction	signal transduction	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes2_lrc6301	apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c1954	cardiac muscle contraction	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c8626	apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c31239	apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes2_lrc4019	cardiac muscle contraction	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes2_lrc6301	signal transduction	signal transduction	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_lrc33990	cardiac muscle contraction	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes2_lrc6301	regulation of apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c8626	protein localization at cell surface	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c8626	cardiac muscle contraction	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_s38533	protein localization	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_s38533	regulation of apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes2_lrc6301	protein localization at cell surface	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_s38533	protein localization at cell surface	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c8626	signal transduction	signal transduction	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c8626	protein localization	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes2_lrc6301	protein localization	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes2_lrc6301	cardiac muscle contraction	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c1954	regulation of apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c31239	protein localization at cell surface	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_s38533	apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c31239	protein localization	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c31239	regulation of apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c31239	signal transduction	signal transduction	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes2_lrc4019	signal transduction	signal transduction	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_lrc33990	signal transduction	signal transduction	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c1954	apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes2_lrc4019	protein localization at cell surface	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes2_lrc4019	regulation of apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c1954	protein localization	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_lrc33990	protein localization at cell surface	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c1954	protein localization at cell surface	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_c1954	signal transduction	signal transduction	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_s38533	cardiac muscle contraction	other biological processes	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_lrc33990	regulation of apoptosis	death	P	Ankyrin-2 (ANK-2) (Brain ankyrin)
ruditapes_lrc39198	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Sperm flagellar protein 2 (Protein KPL2)
ruditapes_lrc39198	biological_process	other biological processes	P	Sperm flagellar protein 2 (Protein KPL2)
ruditapes2_lrc6622	biological_process	other biological processes	P	Sperm flagellar protein 2 (Protein KPL2)
ruditapes2_lrc6376	biological_process	other biological processes	P	Sperm flagellar protein 2 (Protein KPL2)
ruditapes2_lrc6376	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Sperm flagellar protein 2 (Protein KPL2)
ruditapes2_lrc6622	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Sperm flagellar protein 2 (Protein KPL2)
ruditapes_c14820	biological_process	other biological processes	P	Uncharacterized protein C10orf118 homolog (Oocyte-testis gene 1 protein)
ruditapes_c4851	glucose 1-phosphate metabolic process	other metabolic processes	P	"Glucose 1,6-bisphosphate synthase (EC 2.7.1.106) (Phosphoglucomutase-2-like 1)"
ruditapes_c2064	carbohydrate metabolic process	other metabolic processes	P	"Glucose 1,6-bisphosphate synthase (EC 2.7.1.106) (Phosphoglucomutase-2-like 1)"
ruditapes_c2064	glucose metabolic process	other metabolic processes	P	"Glucose 1,6-bisphosphate synthase (EC 2.7.1.106) (Phosphoglucomutase-2-like 1)"
ruditapes_c4851	glucose metabolic process	other metabolic processes	P	"Glucose 1,6-bisphosphate synthase (EC 2.7.1.106) (Phosphoglucomutase-2-like 1)"
ruditapes_c4851	carbohydrate metabolic process	other metabolic processes	P	"Glucose 1,6-bisphosphate synthase (EC 2.7.1.106) (Phosphoglucomutase-2-like 1)"
ruditapes_c2064	glucose 1-phosphate metabolic process	other metabolic processes	P	"Glucose 1,6-bisphosphate synthase (EC 2.7.1.106) (Phosphoglucomutase-2-like 1)"
ruditapes_c27363	heme biosynthetic process	other metabolic processes	P	"Putative transferase CAF17 homolog, mitochondrial (EC 2.1.-.-) (Iron-sulfur cluster assembly factor homolog)"
ruditapes_c27363	glycine catabolic process	other metabolic processes	P	"Putative transferase CAF17 homolog, mitochondrial (EC 2.1.-.-) (Iron-sulfur cluster assembly factor homolog)"
ruditapes_c27363	biological_process	other biological processes	P	"Putative transferase CAF17 homolog, mitochondrial (EC 2.1.-.-) (Iron-sulfur cluster assembly factor homolog)"
ruditapes_c11215	positive regulation of protein amino acid phosphorylation	protein metabolism	P	Leucine-rich repeat neuronal protein 3 (Neuronal leucine-rich repeat protein 3) (NLRR-3)
ruditapes_lrc35421	extracellular matrix organization	cell organization and biogenesis	P	SPARC-related modular calcium-binding protein 2 (Secreted modular calcium-binding protein 2) (SMOC-2)
ruditapes_c8104	positive regulation of cell-substrate adhesion	cell adhesion	P	SPARC-related modular calcium-binding protein 2 (Secreted modular calcium-binding protein 2) (SMOC-2)
ruditapes_c8104	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 2 (Secreted modular calcium-binding protein 2) (SMOC-2)
ruditapes_lrc35421	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 2 (Secreted modular calcium-binding protein 2) (SMOC-2)
ruditapes_lrc35421	positive regulation of cell-substrate adhesion	cell adhesion	P	SPARC-related modular calcium-binding protein 2 (Secreted modular calcium-binding protein 2) (SMOC-2)
ruditapes_c8104	extracellular matrix organization	cell organization and biogenesis	P	SPARC-related modular calcium-binding protein 2 (Secreted modular calcium-binding protein 2) (SMOC-2)
ruditapes_c25903	biological_process	other biological processes	P	Tetratricopeptide repeat protein 27 (TPR repeat protein 27)
ruditapes_c11155	biological_process	other biological processes	P	Exonuclease 3'-5' domain-containing protein 1 (Exonuclease 3'-5' domain-like-containing protein 1)
ruditapes_c11155	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Exonuclease 3'-5' domain-containing protein 1 (Exonuclease 3'-5' domain-like-containing protein 1)
ruditapes_c9012	biological_process	other biological processes	P	IQ and ubiquitin-like domain-containing protein
ruditapes_c19717	biological_process	other biological processes	P	Protein FAM160B1
ruditapes_c8169	biological_process	other biological processes	P	Uncharacterized protein ENSP00000386791 homolog
ruditapes2_c1082	biological_process	other biological processes	P	Uncharacterized protein C10orf107 homolog
ruditapes_c12963	biological_process	other biological processes	P	Uncharacterized protein C10orf107 homolog
ruditapes_c8087	biological_process	other biological processes	P	Coiled-coil domain-containing protein 178
ruditapes2_c2857	biological_process	other biological processes	P	Coiled-coil domain-containing protein 17
ruditapes_c30846	biological_process	other biological processes	P	Uncharacterized protein C5orf42 homolog
ruditapes_c15335	biological_process	other biological processes	P	Uncharacterized protein C5orf42 homolog
ruditapes_c24907	activation of JUN kinase activity	signal transduction	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c24907	activation of JUN kinase activity	stress response	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c24907	activation of JUN kinase activity	protein metabolism	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c24907	protein amino acid phosphorylation	protein metabolism	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c24907	JNK cascade	signal transduction	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c24907	JNK cascade	stress response	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c24907	apoptosis	death	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c24907	response to stress	stress response	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c24907	positive regulation of neuron apoptosis	death	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c24907	stress-activated MAPK cascade	signal transduction	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c24907	stress-activated MAPK cascade	stress response	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c24907	phosphorylation	other metabolic processes	P	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)
ruditapes_c27164	cell cycle	cell cycle and proliferation	P	Cyclin-dependent kinase-like 1 (EC 2.7.11.22)
ruditapes_c27164	heart development	developmental processes	P	Cyclin-dependent kinase-like 1 (EC 2.7.11.22)
ruditapes_c27164	biological_process	other biological processes	P	Cyclin-dependent kinase-like 1 (EC 2.7.11.22)
ruditapes_c27164	phosphorylation	other metabolic processes	P	Cyclin-dependent kinase-like 1 (EC 2.7.11.22)
ruditapes_c27164	protein amino acid phosphorylation	protein metabolism	P	Cyclin-dependent kinase-like 1 (EC 2.7.11.22)
ruditapes_c19578	protein ubiquitination	protein metabolism	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135)
ruditapes_c19578	proteolysis	protein metabolism	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135)
ruditapes_c19578	Golgi organization	cell organization and biogenesis	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135)
ruditapes_c19578	mitosis	cell cycle and proliferation	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135)
ruditapes_c19578	mitosis	cell organization and biogenesis	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135)
ruditapes_c19578	endoplasmic reticulum membrane fusion	cell organization and biogenesis	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135)
ruditapes_c19308	biological_process	other biological processes	P	Zinc finger SWIM domain-containing protein 3
ruditapes_c26971	mRNA processing	RNA metabolism	P	Intron-binding protein aquarius
ruditapes_c26971	RNA splicing	RNA metabolism	P	Intron-binding protein aquarius
ruditapes_c7327	RNA splicing	RNA metabolism	P	Intron-binding protein aquarius
ruditapes_c7327	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Intron-binding protein aquarius
ruditapes_c26971	biological_process	other biological processes	P	Intron-binding protein aquarius
ruditapes_c7327	mRNA processing	RNA metabolism	P	Intron-binding protein aquarius
ruditapes_c26971	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Intron-binding protein aquarius
ruditapes_c7327	biological_process	other biological processes	P	Intron-binding protein aquarius
ruditapes_c31359	biological_process	other biological processes	P	Complement C1q-like protein 2 (C1q and tumor necrosis factor-related protein 10) (C1qTNF10) (CTRP10)
ruditapes_c22564	biological_process	other biological processes	P	Complement C1q-like protein 2 (C1q and tumor necrosis factor-related protein 10) (C1qTNF10) (CTRP10)
ruditapes_c24926	cilium morphogenesis	cell organization and biogenesis	P	Coiled-coil and C2 domain-containing protein 2A
ruditapes_c23576	cell projection organization	cell organization and biogenesis	P	Coiled-coil and C2 domain-containing protein 2A
ruditapes_c23576	cilium morphogenesis	cell organization and biogenesis	P	Coiled-coil and C2 domain-containing protein 2A
ruditapes_c24926	cell projection organization	cell organization and biogenesis	P	Coiled-coil and C2 domain-containing protein 2A
ruditapes2_lrc4135	ATP catabolic process	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	ATP catabolic process	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	cell chemotaxis	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	positive regulation of cell migration	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	positive regulation of cell migration	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	multidrug transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	xenobiotic transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	positive regulation of cell migration	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	neuroprotection	death	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	cell chemotaxis	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	positive regulation of cell migration	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	oxidation reduction	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	response to oxidative stress	stress response	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	cell chemotaxis	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	drug export	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	neuroprotection	death	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	transmembrane glutathione transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	response to oxidative stress	stress response	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	response to drug	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	transmembrane transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	response to oxidative stress	stress response	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	cell chemotaxis	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	drug export	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	response to drug	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	transmembrane glutathione transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	neuroprotection	death	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	oxidation reduction	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	drug export	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	xenobiotic transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	transmembrane transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	daunorubicin transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	transmembrane transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	positive regulation of cell migration	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	phospholipid efflux	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	oxidation reduction	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	multidrug transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	multidrug transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	positive regulation of cell migration	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	multidrug transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	drug export	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	transmembrane glutathione transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	cell chemotaxis	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	drug export	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	neuroprotection	death	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	transmembrane transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	oxidation reduction	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	response to drug	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	multidrug transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	ATP catabolic process	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	oxidation reduction	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	response to drug	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	transmembrane glutathione transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	plasma membrane long-chain fatty acid transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	plasma membrane long-chain fatty acid transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	plasma membrane long-chain fatty acid transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	cell chemotaxis	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	transmembrane glutathione transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	xenobiotic transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	transmembrane transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	xenobiotic transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	daunorubicin transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	response to oxidative stress	stress response	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	response to drug	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	neuroprotection	death	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	neuroprotection	death	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	plasma membrane long-chain fatty acid transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	phospholipid efflux	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	phospholipid efflux	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	xenobiotic transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	daunorubicin transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	oxidation reduction	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	multidrug transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	phospholipid efflux	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	daunorubicin transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	xenobiotic transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	response to drug	other biological processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4153	response to oxidative stress	stress response	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	drug export	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	ATP catabolic process	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	daunorubicin transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	response to oxidative stress	stress response	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	phospholipid efflux	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc4135	transmembrane transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	transmembrane glutathione transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	plasma membrane long-chain fatty acid transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_lrc35117	plasma membrane long-chain fatty acid transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	daunorubicin transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c23157	ATP catabolic process	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_s34389	phospholipid efflux	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes2_lrc5053	ATP catabolic process	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c10327	DNA repair	stress response	P	Structural maintenance of chromosomes protein 5 (SMC protein 5) (SMC-5) (mSMC5) (Protein expressed in male leptotene and zygotene spermatocytes 453) (MLZ-453)
ruditapes_c10327	DNA repair	DNA metabolism	P	Structural maintenance of chromosomes protein 5 (SMC protein 5) (SMC-5) (mSMC5) (Protein expressed in male leptotene and zygotene spermatocytes 453) (MLZ-453)
ruditapes_c10327	DNA recombination	DNA metabolism	P	Structural maintenance of chromosomes protein 5 (SMC protein 5) (SMC-5) (mSMC5) (Protein expressed in male leptotene and zygotene spermatocytes 453) (MLZ-453)
ruditapes_c10327	response to DNA damage stimulus	stress response	P	Structural maintenance of chromosomes protein 5 (SMC protein 5) (SMC-5) (mSMC5) (Protein expressed in male leptotene and zygotene spermatocytes 453) (MLZ-453)
ruditapes_c10327	biological_process	other biological processes	P	Structural maintenance of chromosomes protein 5 (SMC protein 5) (SMC-5) (mSMC5) (Protein expressed in male leptotene and zygotene spermatocytes 453) (MLZ-453)
ruditapes_c21300	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation regulator 1 (Formin-binding protein 28) (FBP 28) (TATA box-binding protein-associated factor 2S) (Transcription factor CA150) (p144)
ruditapes_c21300	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation regulator 1 (Formin-binding protein 28) (FBP 28) (TATA box-binding protein-associated factor 2S) (Transcription factor CA150) (p144)
ruditapes2_c2322	response to hypoxia	stress response	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes2_c2322	chaperone-mediated protein complex assembly	cell organization and biogenesis	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes2_c2322	ATP catabolic process	other metabolic processes	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes2_c2322	protein homooligomerization	cell organization and biogenesis	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes2_c2322	mitochondrion organization	cell organization and biogenesis	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes2_c2322	misfolded or incompletely synthesized protein catabolic process	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes2_c2322	proteolysis	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes2_c2322	oxidation-dependent protein catabolic process	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes2_c2322	cellular response to oxidative stress	stress response	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c9717	regulation of defense response to virus by host	stress response	P	Interferon lambda receptor 1 (IFN-lambda R1) (Cytokine receptor class-II member 12) (Cytokine receptor family 2 member 12) (CRF2-12) (Interleukin-28 receptor subunit alpha) (IL-28 receptor subunit alpha) (IL-28R-alpha) (IL-28RA)
ruditapes_s37592	biological_process	other biological processes	P	Interferon lambda-3 (IFN-lambda-3) (Interleukin-28B) (IL-28B)
ruditapes_s37592	response to virus	other biological processes	P	Interferon lambda-3 (IFN-lambda-3) (Interleukin-28B) (IL-28B)
ruditapes_c7037	piRNA metabolic process	RNA metabolism	P	Piwi-like protein 4 (mAgo5)
ruditapes_c7037	regulation of translation	protein metabolism	P	Piwi-like protein 4 (mAgo5)
ruditapes_c16439	gene silencing by RNA	other metabolic processes	P	Piwi-like protein 4 (mAgo5)
ruditapes_c7037	spermatogenesis	other biological processes	P	Piwi-like protein 4 (mAgo5)
ruditapes_c16439	meiosis	cell cycle and proliferation	P	Piwi-like protein 4 (mAgo5)
ruditapes_c16439	multicellular organismal development	developmental processes	P	Piwi-like protein 4 (mAgo5)
ruditapes_c7037	gene silencing by RNA	other metabolic processes	P	Piwi-like protein 4 (mAgo5)
ruditapes_c7037	meiosis	cell cycle and proliferation	P	Piwi-like protein 4 (mAgo5)
ruditapes_c16439	cell differentiation	other biological processes	P	Piwi-like protein 4 (mAgo5)
ruditapes_c16439	regulation of translation	protein metabolism	P	Piwi-like protein 4 (mAgo5)
ruditapes_c7037	DNA methylation during gametogenesis	DNA metabolism	P	Piwi-like protein 4 (mAgo5)
ruditapes_c7037	multicellular organismal development	developmental processes	P	Piwi-like protein 4 (mAgo5)
ruditapes_c7037	cell differentiation	other biological processes	P	Piwi-like protein 4 (mAgo5)
ruditapes_c16439	spermatogenesis	other biological processes	P	Piwi-like protein 4 (mAgo5)
ruditapes_c16439	piRNA metabolic process	RNA metabolism	P	Piwi-like protein 4 (mAgo5)
ruditapes_c16439	DNA methylation during gametogenesis	DNA metabolism	P	Piwi-like protein 4 (mAgo5)
ruditapes_lrc17892	Notch signaling pathway	signal transduction	P	Nicastrin
ruditapes_lrc17892	membrane protein ectodomain proteolysis	protein metabolism	P	Nicastrin
ruditapes_lrc17892	positive regulation of catalytic activity	other biological processes	P	Nicastrin
ruditapes_lrc17892	protein processing	protein metabolism	P	Nicastrin
ruditapes_c13166	negative regulation of cell proliferation	cell cycle and proliferation	P	Calcium homeostasis endoplasmic reticulum protein (SR-related CTD-associated factor 6)
ruditapes_c13166	cellular calcium ion homeostasis	other biological processes	P	Calcium homeostasis endoplasmic reticulum protein (SR-related CTD-associated factor 6)
ruditapes_c13166	RNA processing	RNA metabolism	P	Calcium homeostasis endoplasmic reticulum protein (SR-related CTD-associated factor 6)
ruditapes_c18873	circadian rhythm	other biological processes	P	PH domain leucine-rich repeat-containing protein phosphatase 1 (EC 3.1.3.16) (Pleckstrin homology domain-containing family E member 1) (PH domain-containing family E member 1) (Suprachiasmatic nucleus circadian oscillatory protein)
ruditapes_c18873	metabolic process	other metabolic processes	P	PH domain leucine-rich repeat-containing protein phosphatase 1 (EC 3.1.3.16) (Pleckstrin homology domain-containing family E member 1) (PH domain-containing family E member 1) (Suprachiasmatic nucleus circadian oscillatory protein)
ruditapes_c18873	apoptosis	death	P	PH domain leucine-rich repeat-containing protein phosphatase 1 (EC 3.1.3.16) (Pleckstrin homology domain-containing family E member 1) (PH domain-containing family E member 1) (Suprachiasmatic nucleus circadian oscillatory protein)
ruditapes_c28230	G-protein coupled receptor protein signaling pathway	signal transduction	P	Frizzled-5 (Fz-5)
ruditapes_c28230	T cell differentiation in the thymus	developmental processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	Spemann organizer formation	cell-cell signaling	P	Frizzled-5 (Fz-5)
ruditapes_c28230	embryonic axis specification	developmental processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	embryonic camera-type eye development	developmental processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	post-embryonic camera-type eye development	developmental processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	Wnt receptor signaling pathway through beta-catenin	signal transduction	P	Frizzled-5 (Fz-5)
ruditapes_c28230	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Frizzled-5 (Fz-5)
ruditapes_c28230	cell surface receptor linked signal transduction	signal transduction	P	Frizzled-5 (Fz-5)
ruditapes_c28230	multicellular organismal development	developmental processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	positive regulation of interferon-gamma production	other biological processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	brain development	developmental processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	gonad development	developmental processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	"determination of anterior/posterior axis, embryo"	developmental processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	biological_process	other biological processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	apoptosis	death	P	Frizzled-5 (Fz-5)
ruditapes_c28230	angiogenesis	developmental processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	labyrinthine layer blood vessel development	developmental processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	axonogenesis	developmental processes	P	Frizzled-5 (Fz-5)
ruditapes_c28230	axonogenesis	cell organization and biogenesis	P	Frizzled-5 (Fz-5)
ruditapes_c28230	Wnt receptor signaling pathway	signal transduction	P	Frizzled-5 (Fz-5)
ruditapes_c28230	signal transduction	signal transduction	P	Frizzled-5 (Fz-5)
ruditapes_c15036	ubiquitin-dependent protein catabolic process	protein metabolism	P	F-box only protein 4
ruditapes_c15036	positive regulation of protein ubiquitination	protein metabolism	P	F-box only protein 4
ruditapes_c15036	protein polyubiquitination	protein metabolism	P	F-box only protein 4
ruditapes_c15036	protein ubiquitination	protein metabolism	P	F-box only protein 4
ruditapes_c15036	telomere maintenance	DNA metabolism	P	F-box only protein 4
ruditapes_c15036	telomere maintenance	cell organization and biogenesis	P	F-box only protein 4
ruditapes_c15036	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	F-box only protein 4
ruditapes_c8722	multicellular organismal development	developmental processes	P	Ephexin-1 (Eph-interacting exchange protein) (Neuronal guanine nucleotide exchange factor)
ruditapes_c8722	nervous system development	developmental processes	P	Ephexin-1 (Eph-interacting exchange protein) (Neuronal guanine nucleotide exchange factor)
ruditapes_c8722	cell differentiation	other biological processes	P	Ephexin-1 (Eph-interacting exchange protein) (Neuronal guanine nucleotide exchange factor)
ruditapes_c8722	regulation of Rho protein signal transduction	signal transduction	P	Ephexin-1 (Eph-interacting exchange protein) (Neuronal guanine nucleotide exchange factor)
ruditapes_c8722	cellular process	other biological processes	P	Ephexin-1 (Eph-interacting exchange protein) (Neuronal guanine nucleotide exchange factor)
ruditapes_c8722	regulation of GTPase activity	other biological processes	P	Ephexin-1 (Eph-interacting exchange protein) (Neuronal guanine nucleotide exchange factor)
ruditapes_c8722	ephrin receptor signaling pathway	signal transduction	P	Ephexin-1 (Eph-interacting exchange protein) (Neuronal guanine nucleotide exchange factor)
ruditapes_c10654	ion transport	transport	P	Metalloreductase STEAP3 (EC 1.16.1.-) (Dudulin-2) (Protein nm1054) (Six-transmembrane epithelial antigen of prostate 3) (Tumor suppressor-activated pathway protein 6)
ruditapes_c10654	iron ion homeostasis	other biological processes	P	Metalloreductase STEAP3 (EC 1.16.1.-) (Dudulin-2) (Protein nm1054) (Six-transmembrane epithelial antigen of prostate 3) (Tumor suppressor-activated pathway protein 6)
ruditapes_c10654	oxidation reduction	other metabolic processes	P	Metalloreductase STEAP3 (EC 1.16.1.-) (Dudulin-2) (Protein nm1054) (Six-transmembrane epithelial antigen of prostate 3) (Tumor suppressor-activated pathway protein 6)
ruditapes_c10654	apoptosis	death	P	Metalloreductase STEAP3 (EC 1.16.1.-) (Dudulin-2) (Protein nm1054) (Six-transmembrane epithelial antigen of prostate 3) (Tumor suppressor-activated pathway protein 6)
ruditapes_c10654	transport	transport	P	Metalloreductase STEAP3 (EC 1.16.1.-) (Dudulin-2) (Protein nm1054) (Six-transmembrane epithelial antigen of prostate 3) (Tumor suppressor-activated pathway protein 6)
ruditapes_c10654	iron ion transport	transport	P	Metalloreductase STEAP3 (EC 1.16.1.-) (Dudulin-2) (Protein nm1054) (Six-transmembrane epithelial antigen of prostate 3) (Tumor suppressor-activated pathway protein 6)
ruditapes_c10654	cell cycle	cell cycle and proliferation	P	Metalloreductase STEAP3 (EC 1.16.1.-) (Dudulin-2) (Protein nm1054) (Six-transmembrane epithelial antigen of prostate 3) (Tumor suppressor-activated pathway protein 6)
ruditapes_c11483	biological_process	other biological processes	P	CAP-Gly domain-containing linker protein 4 (Restin-like protein 2)
ruditapes_c13053	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Zinc finger MIZ domain-containing protein 2 (PIAS-like protein Zimp7)
ruditapes_c26674	biological_process	other biological processes	P	Biotinidase (Biotinase) (EC 3.5.1.12)
ruditapes_c26674	nitrogen compound metabolic process	other metabolic processes	P	Biotinidase (Biotinase) (EC 3.5.1.12)
ruditapes_c26574	biological_process	other biological processes	P	SID1 transmembrane family member 2
ruditapes_c2977	response to estrogen stimulus	other biological processes	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	blastocyst development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	response to wounding	stress response	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	inner cell mass cell proliferation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	protein transport	transport	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	transport	transport	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	positive regulation of epithelial cell differentiation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	multicellular organismal development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	inner cell mass cell proliferation	cell cycle and proliferation	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	cell differentiation	other biological processes	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	tissue regeneration	stress response	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	tissue regeneration	developmental processes	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c2977	response to organic substance	other biological processes	P	Deleted in malignant brain tumors 1 protein (Ebnerin) (Hensin) (Pancrin)
ruditapes_c18991	regulation of hydrogen peroxide metabolic process	other metabolic processes	P	NADPH oxidase activator 1
ruditapes_c18991	superoxide metabolic process	other metabolic processes	P	NADPH oxidase activator 1
ruditapes_c18991	regulation of respiratory burst	other metabolic processes	P	NADPH oxidase activator 1
ruditapes_c19762	neuropeptide signaling pathway	signal transduction	P	G-protein coupled receptor 64 (Rat epididymis-specific protein 6) (Re6)
ruditapes_c12534	neuropeptide signaling pathway	signal transduction	P	G-protein coupled receptor 64 (Rat epididymis-specific protein 6) (Re6)
ruditapes_c19762	cell surface receptor linked signal transduction	signal transduction	P	G-protein coupled receptor 64 (Rat epididymis-specific protein 6) (Re6)
ruditapes_c12534	signal transduction	signal transduction	P	G-protein coupled receptor 64 (Rat epididymis-specific protein 6) (Re6)
ruditapes_c19762	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 64 (Rat epididymis-specific protein 6) (Re6)
ruditapes_c12534	cell surface receptor linked signal transduction	signal transduction	P	G-protein coupled receptor 64 (Rat epididymis-specific protein 6) (Re6)
ruditapes_c12534	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 64 (Rat epididymis-specific protein 6) (Re6)
ruditapes_c19762	signal transduction	signal transduction	P	G-protein coupled receptor 64 (Rat epididymis-specific protein 6) (Re6)
ruditapes2_c5199	detection of yeast	other biological processes	P	CD209 antigen-like protein B (DC-SIGN-related protein 1) (DC-SIGNR1) (OtB7) (CD antigen CD209)
ruditapes2_c5199	positive regulation of tumor necrosis factor biosynthetic process	other metabolic processes	P	CD209 antigen-like protein B (DC-SIGN-related protein 1) (DC-SIGNR1) (OtB7) (CD antigen CD209)
ruditapes2_c5199	positive regulation of phagocytosis	transport	P	CD209 antigen-like protein B (DC-SIGN-related protein 1) (DC-SIGNR1) (OtB7) (CD antigen CD209)
ruditapes2_c5199	positive regulation of phagocytosis	cell organization and biogenesis	P	CD209 antigen-like protein B (DC-SIGN-related protein 1) (DC-SIGNR1) (OtB7) (CD antigen CD209)
ruditapes2_c5199	"phagocytosis, recognition"	transport	P	CD209 antigen-like protein B (DC-SIGN-related protein 1) (DC-SIGNR1) (OtB7) (CD antigen CD209)
ruditapes2_c5199	"phagocytosis, recognition"	cell organization and biogenesis	P	CD209 antigen-like protein B (DC-SIGN-related protein 1) (DC-SIGNR1) (OtB7) (CD antigen CD209)
ruditapes2_c5199	detection of bacterium	other biological processes	P	CD209 antigen-like protein B (DC-SIGN-related protein 1) (DC-SIGNR1) (OtB7) (CD antigen CD209)
ruditapes2_c5199	endocytosis	transport	P	CD209 antigen-like protein B (DC-SIGN-related protein 1) (DC-SIGNR1) (OtB7) (CD antigen CD209)
ruditapes2_c5199	endocytosis	cell organization and biogenesis	P	CD209 antigen-like protein B (DC-SIGN-related protein 1) (DC-SIGNR1) (OtB7) (CD antigen CD209)
ruditapes_c9537	cytokinesis	other biological processes	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	cell division	other biological processes	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	mRNA transport	transport	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	mitosis	cell cycle and proliferation	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	mitosis	cell organization and biogenesis	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	hemopoiesis	developmental processes	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	protein transport	transport	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	nuclear pore complex assembly	cell organization and biogenesis	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	cell cycle	cell cycle and proliferation	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	transport	transport	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	multicellular organismal development	developmental processes	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_c9537	"transcription, DNA-dependent"	RNA metabolism	P	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)
ruditapes_lrc31733	oxidation reduction	other metabolic processes	P	Alkyl hydroperoxide reductase subunit F (EC 1.8.1.-)
ruditapes_c23397	response to antibiotic	other biological processes	P	Membrane-associated protein TcaA
ruditapes_c11790	carbohydrate transport	transport	P	PTS system EIIBC component SE
ruditapes_c11790	phosphorylation	other metabolic processes	P	PTS system EIIBC component SE
ruditapes_c11790	transport	transport	P	PTS system EIIBC component SE
ruditapes_c11790	phosphoenolpyruvate-dependent sugar phosphotransferase system	signal transduction	P	PTS system EIIBC component SE
ruditapes_c11790	phosphoenolpyruvate-dependent sugar phosphotransferase system	transport	P	PTS system EIIBC component SE
ruditapes_c25623	cell wall organization	cell organization and biogenesis	P	Lipid II:glycine glycyltransferase (EC 2.3.2.16) (Factor essential for expression of methicillin resistance X)
ruditapes_c25623	peptidoglycan biosynthetic process	other metabolic processes	P	Lipid II:glycine glycyltransferase (EC 2.3.2.16) (Factor essential for expression of methicillin resistance X)
ruditapes_c25623	regulation of cell shape	cell organization and biogenesis	P	Lipid II:glycine glycyltransferase (EC 2.3.2.16) (Factor essential for expression of methicillin resistance X)
ruditapes_c18499	metabolic process	other metabolic processes	P	Pyrimidine-nucleoside phosphorylase (PYNP) (EC 2.4.2.2)
ruditapes_c18499	pyrimidine nucleoside metabolic process	other metabolic processes	P	Pyrimidine-nucleoside phosphorylase (PYNP) (EC 2.4.2.2)
ruditapes_c18499	pyrimidine base metabolic process	other metabolic processes	P	Pyrimidine-nucleoside phosphorylase (PYNP) (EC 2.4.2.2)
ruditapes_c24476	protein amino acid dephosphorylation	protein metabolism	P	Low molecular weight protein-tyrosine-phosphatase PtpA (EC 3.1.3.48) (Phosphotyrosine phosphatase A) (PTPase A)
ruditapes_c3732	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c3732	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c3732	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c3732	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c3732	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c27947	translation	protein metabolism	P	Peptide deformylase (PDF) (EC 3.5.1.88) (Polypeptide deformylase)
ruditapes_c21807	oxidation reduction	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase 1 (GAPDH 1) (EC 1.2.1.12)
ruditapes_c21807	glucose metabolic process	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase 1 (GAPDH 1) (EC 1.2.1.12)
ruditapes_c21807	glycolysis	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase 1 (GAPDH 1) (EC 1.2.1.12)
ruditapes_c17270	response to oxidative stress	stress response	P	Iron-sulfur cluster repair protein ScdA
ruditapes_c17270	response to stress	stress response	P	Iron-sulfur cluster repair protein ScdA
ruditapes_c16763	proteolysis	protein metabolism	P	Probable succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18)
ruditapes_c16763	metabolic process	other metabolic processes	P	Probable succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18)
ruditapes_c16763	diaminopimelate biosynthetic process	other metabolic processes	P	Probable succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18)
ruditapes_c16763	lysine biosynthetic process	other metabolic processes	P	Probable succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18)
ruditapes_c16763	cellular amino acid biosynthetic process	other metabolic processes	P	Probable succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18)
ruditapes_c22853	tRNA processing	RNA metabolism	P	tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase)
ruditapes_c20567	phosphorylation	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c20567	isoprenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c20567	terpenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c30658	"transcription, DNA-dependent"	RNA metabolism	P	Lactose phosphotransferase system repressor
ruditapes_c30658	lactose metabolic process	other metabolic processes	P	Lactose phosphotransferase system repressor
ruditapes_c30658	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Lactose phosphotransferase system repressor
ruditapes_c23343	carbohydrate metabolic process	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes_c23343	lactose metabolic process	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes_c23343	phosphorylation	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes_c23343	lactose catabolic process via tagatose-6-phosphate	other metabolic processes	P	Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase)
ruditapes_c31687	DNA repair	stress response	P	ATP-dependent DNA helicase RecG (EC 3.6.4.12)
ruditapes_c31687	DNA repair	DNA metabolism	P	ATP-dependent DNA helicase RecG (EC 3.6.4.12)
ruditapes_c31687	response to DNA damage stimulus	stress response	P	ATP-dependent DNA helicase RecG (EC 3.6.4.12)
ruditapes_c31687	DNA recombination	DNA metabolism	P	ATP-dependent DNA helicase RecG (EC 3.6.4.12)
ruditapes_c5469	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c5469	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c5469	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c5469	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes2_c1107	dephosphorylation	other metabolic processes	P	Putative 5'(3')-deoxyribonucleotidase (EC 3.1.3.-)
ruditapes_s39762	heme biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_s39762	porphyrin biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c4562	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c4562	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c4562	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c4562	RNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c21903	cell wall organization	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c21903	regulation of cell shape	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c21903	peptidoglycan biosynthetic process	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c21903	response to antibiotic	other biological processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c21903	dephosphorylation	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_s39829	guanosine tetraphosphate metabolic process	other metabolic processes	P	GTP pyrophosphokinase rsh (EC 2.7.6.5) ((p)ppGpp synthase) (ATP:GTP 3'-pyrophosphotransferase)
ruditapes_s39829	phosphorylation	other metabolic processes	P	GTP pyrophosphokinase rsh (EC 2.7.6.5) ((p)ppGpp synthase) (ATP:GTP 3'-pyrophosphotransferase)
ruditapes_c16781	carbohydrate metabolic process	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_c16781	pentose-phosphate shunt	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_c6766	porphyrin biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c6766	heme biosynthetic process	other metabolic processes	P	Ferrochelatase (EC 4.99.1.1) (Heme synthase) (Protoheme ferro-lyase)
ruditapes_c19365	peptidoglycan biosynthetic process	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c19365	regulation of cell shape	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c19365	dephosphorylation	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c19365	cell wall organization	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_c19365	response to antibiotic	other biological processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes2_c3546	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulator SlyA
ruditapes2_c3546	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulator SlyA
ruditapes_c5029	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c5029	methylation	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c5029	dTMP biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c24778	oxidation reduction	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c24778	metabolic process	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c24778	pyridoxine biosynthetic process	other metabolic processes	P	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)
ruditapes_c28027	translation	protein metabolism	P	30S ribosomal protein S15
ruditapes_c15146	fatty acid biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes_c15146	macromolecule biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes_c15146	lipid biosynthetic process	other metabolic processes	P	Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
ruditapes_c21606	ubiquinone biosynthetic process	other metabolic processes	P	"Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)"
ruditapes_c21606	menaquinone biosynthetic process	other metabolic processes	P	"Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)"
ruditapes_c21606	methylation	other metabolic processes	P	"Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)"
ruditapes_c25002	translation	protein metabolism	P	30S ribosomal protein S12
ruditapes_c9542	metabolic process	other metabolic processes	P	Histidine biosynthesis bifunctional protein HisIE [Includes: Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19); Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)]
ruditapes_c9542	histidine biosynthetic process	other metabolic processes	P	Histidine biosynthesis bifunctional protein HisIE [Includes: Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19); Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)]
ruditapes_c9542	cellular amino acid biosynthetic process	other metabolic processes	P	Histidine biosynthesis bifunctional protein HisIE [Includes: Phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC 3.5.4.19); Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)]
ruditapes_c29231	'de novo' IMP biosynthetic process	other metabolic processes	P	N5-carboxyaminoimidazole ribonucleotide synthase (N5-CAIR synthase) (EC 6.3.4.18) (5-(carboxyamino)imidazole ribonucleotide synthetase)
ruditapes_c29231	purine nucleotide biosynthetic process	other metabolic processes	P	N5-carboxyaminoimidazole ribonucleotide synthase (N5-CAIR synthase) (EC 6.3.4.18) (5-(carboxyamino)imidazole ribonucleotide synthetase)
ruditapes_c21241	queuosine biosynthetic process	RNA metabolism	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes_c21241	oxidation reduction	other metabolic processes	P	NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
ruditapes2_c2453	proteolysis	protein metabolism	P	Lipoprotein signal peptidase (EC 3.4.23.36) (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)
ruditapes_c23514	carbohydrate metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c23514	carbohydrate biosynthetic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c23514	glutamine metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
ruditapes_c17233	methionine biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c17233	cellular amino acid biosynthetic process	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_c17233	methylation	other metabolic processes	P	"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)"
ruditapes_lrc36555	protein catabolic process	protein metabolism	P	ATP-dependent Clp protease adapter protein ClpS
ruditapes2_c823	cell division	other biological processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c823	cell cycle	cell cycle and proliferation	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c823	regulation of cell shape	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c823	peptidoglycan biosynthetic process	other metabolic processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_c823	cell wall organization	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes2_lrc7378	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes2_c120	glycogen biosynthetic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes2_c120	carbohydrate metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes2_c120	glycogen metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Alpha-(1->4)-glucan branching enzyme) (Glycogen branching enzyme) (BE)"
ruditapes_s39228	pentose-phosphate shunt	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_s35423	pentose-phosphate shunt	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_lrc38589	pentose-phosphate shunt	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_s39228	carbohydrate metabolic process	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_s35423	carbohydrate metabolic process	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_lrc38589	carbohydrate metabolic process	other metabolic processes	P	Transaldolase (EC 2.2.1.2)
ruditapes_c21156	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c21156	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c21156	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c26449	"transcription, DNA-dependent"	RNA metabolism	P	Putative sporulation transcription regulator WhiA
ruditapes_c26449	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative sporulation transcription regulator WhiA
ruditapes_c18350	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2)
ruditapes_c18350	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2)
ruditapes_c18350	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2)
ruditapes_c18350	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2)
ruditapes_c18350	cell division	other biological processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2)
ruditapes_c18350	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2)
ruditapes_c17635	D-amino acid catabolic process	other metabolic processes	P	D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)
ruditapes_c5421	metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c5421	phosphorylation	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c5421	organic acid metabolic process	other metabolic processes	P	Acetate kinase (EC 2.7.2.1) (Acetokinase)
ruditapes_c12436	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_c12436	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_c12436	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_c12436	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_c12436	cell division	other biological processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_c12436	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1)
ruditapes_lrc18791	phosphorylation	other metabolic processes	P	Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase) (EC 2.7.8.25)
ruditapes_c19306	dTMP biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c19306	methylation	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c19306	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes2_c2370	carbon utilization by fixation of carbon dioxide	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes2_c2370	tricarboxylic acid cycle	other metabolic processes	P	Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31)
ruditapes_c15278	DNA repair	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c15278	DNA repair	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c15278	response to DNA damage stimulus	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c15278	regulation of ARF GTPase activity	signal transduction	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c15278	DNA recombination	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c5359	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c5359	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c5359	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c16234	transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c16234	ion transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c16234	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c16234	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c16234	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c16234	proton transport	transport	P	ATP synthase subunit a (ATP synthase F0 sector subunit a) (F-ATPase subunit 6)
ruditapes_c28326	methylation	other metabolic processes	P	Uncharacterized RNA methyltransferase SAG0413 (EC 2.1.1.-)
ruditapes_c28326	RNA processing	RNA metabolism	P	Uncharacterized RNA methyltransferase SAG0413 (EC 2.1.1.-)
ruditapes_c28326	RNA methylation	RNA metabolism	P	Uncharacterized RNA methyltransferase SAG0413 (EC 2.1.1.-)
ruditapes_c19517	transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_c19517	ATP catabolic process	other metabolic processes	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_c19517	amino acid transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_c19517	methionine transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_c13278	regulation of cell shape	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c13278	peptidoglycan biosynthetic process	other metabolic processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c13278	cell cycle	cell cycle and proliferation	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c13278	cell division	other biological processes	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c13278	cell wall organization	cell organization and biogenesis	P	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
ruditapes_c9807	protein amino acid methylation	protein metabolism	P	Release factor glutamine methyltransferase (RF MTase) (EC 2.1.1.n16) (N5-glutamine methyltransferase PrmC) (Protein-(glutamine-N5) MTase PrmC) (Protein-glutamine N-methyltransferase PrmC)
ruditapes_c9807	methylation	other metabolic processes	P	Release factor glutamine methyltransferase (RF MTase) (EC 2.1.1.n16) (N5-glutamine methyltransferase PrmC) (Protein-(glutamine-N5) MTase PrmC) (Protein-glutamine N-methyltransferase PrmC)
ruditapes_c18912	ATP catabolic process	other metabolic processes	P	Hemin import ATP-binding protein HmuV (EC 3.6.3.-)
ruditapes_c18912	transport	transport	P	Hemin import ATP-binding protein HmuV (EC 3.6.3.-)
ruditapes_c22448	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon (EC 3.1.1.61)
ruditapes_c22448	chemotaxis	other biological processes	P	Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon (EC 3.1.1.61)
ruditapes_c22448	two-component signal transduction system (phosphorelay)	signal transduction	P	Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon (EC 3.1.1.61)
ruditapes_c21762	chemotaxis	other biological processes	P	Probable chemoreceptor glutamine deamidase CheD 1 (EC 3.5.1.44)
ruditapes_c7281	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c7281	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_c7281	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_s39777	protein folding	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_s39777	cell cycle	cell cycle and proliferation	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_s39777	protein peptidyl-prolyl isomerization	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_s39777	cell division	other biological processes	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_s39777	protein transport	transport	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c22771	lipid biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c22771	lipid A biosynthetic process	other metabolic processes	P	Lipid-A-disaccharide synthase (EC 2.4.1.182)
ruditapes_c15216	protein metabolic process	protein metabolism	P	Probable cytosol aminopeptidase 1 (EC 3.4.11.1) (Leucine aminopeptidase 1) (LAP 1) (EC 3.4.11.10) (Leucyl aminopeptidase 1)
ruditapes_c15216	proteolysis	protein metabolism	P	Probable cytosol aminopeptidase 1 (EC 3.4.11.1) (Leucine aminopeptidase 1) (LAP 1) (EC 3.4.11.10) (Leucyl aminopeptidase 1)
ruditapes2_c888	riboflavin biosynthetic process	other metabolic processes	P	"6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (EC 2.5.1.78)"
ruditapes2_c907	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
ruditapes2_c907	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
ruditapes2_lrc5286	rRNA processing	RNA metabolism	P	Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes2_lrc5286	RNA methylation	RNA metabolism	P	Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes2_lrc5286	methylation	other metabolic processes	P	Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c24021	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c24021	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c24021	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c24021	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c24021	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_c24021	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes2_c408	N-acetylmannosamine metabolic process	other metabolic processes	P	Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) (ManNAc-6-P epimerase)
ruditapes2_c408	carbohydrate metabolic process	other metabolic processes	P	Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) (ManNAc-6-P epimerase)
ruditapes2_c408	metabolic process	other metabolic processes	P	Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) (ManNAc-6-P epimerase)
ruditapes_c28486	nucleotide-excision repair	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c28486	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c28486	DNA repair	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c28486	DNA repair	DNA metabolism	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c28486	response to DNA damage stimulus	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes_c28486	SOS response	stress response	P	UvrABC system protein B (Protein UvrB) (Excinuclease ABC subunit B)
ruditapes2_c1880	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_c1880	cell division	other biological processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_c1880	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_c1880	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_c1880	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes2_c1880	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c6996	thiamin biosynthetic process	other metabolic processes	P	Probable tRNA sulfurtransferase (EC 2.8.1.4) (Sulfur carrier protein ThiS sulfurtransferase) (Thiamine biosynthesis protein ThiI) (tRNA 4-thiouridine synthase)
ruditapes_c24932	oxidation reduction	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c24932	aromatic amino acid family biosynthetic process	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c24932	cellular amino acid biosynthetic process	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c8836	translation	protein metabolism	P	30S ribosomal protein S15
ruditapes_c1219	proteolysis	protein metabolism	P	Zinc metalloprotease RasP (EC 3.4.24.-) (Regulating alternative sigma factor protease) (Regulating anti-sigma-W factor activity protease)
ruditapes_c23243	carbohydrate metabolic process	other metabolic processes	P	Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase)
ruditapes_c23243	N-acetylglucosamine metabolic process	other metabolic processes	P	Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase)
ruditapes_lrc34390	translation	protein metabolism	P	Isoleucine--tRNA ligase 2 (EC 6.1.1.5) (Isoleucyl-tRNA synthetase 2) (IleRS 2)
ruditapes_lrc34390	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase 2 (EC 6.1.1.5) (Isoleucyl-tRNA synthetase 2) (IleRS 2)
ruditapes_lrc34390	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase 2 (EC 6.1.1.5) (Isoleucyl-tRNA synthetase 2) (IleRS 2)
ruditapes_lrc34390	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase 2 (EC 6.1.1.5) (Isoleucyl-tRNA synthetase 2) (IleRS 2)
ruditapes_lrc34390	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase 2 (EC 6.1.1.5) (Isoleucyl-tRNA synthetase 2) (IleRS 2)
ruditapes_c12647	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c12647	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c28833	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c28833	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c28833	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c28833	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c28833	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c27575	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes_c27575	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes_s38369	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_s38369	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_s38369	tRNA aminoacylation for protein translation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_s38369	tRNA aminoacylation for protein translation	RNA metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_s38369	translation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_lrc31458	NAD biosynthetic process	other metabolic processes	P	NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5)
ruditapes_c18609	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_c18609	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_c18609	cellular amino acid biosynthetic process	other metabolic processes	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_c18609	asparagine biosynthetic process	other metabolic processes	P	Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine synthetase A)
ruditapes_c14823	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c14823	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c14823	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c14823	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c14823	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c30332	tRNA aminoacylation for protein translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c30332	tRNA aminoacylation for protein translation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c30332	valyl-tRNA aminoacylation	RNA metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c30332	translation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes_c30332	valyl-tRNA aminoacylation	protein metabolism	P	Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)
ruditapes2_c1428	regulation of cell shape	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes2_c1428	dephosphorylation	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes2_c1428	response to antibiotic	other biological processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes2_c1428	peptidoglycan biosynthetic process	other metabolic processes	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes2_c1428	cell wall organization	cell organization and biogenesis	P	Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase)
ruditapes_lrc8123	glycolysis	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_lrc8123	tricarboxylic acid cycle	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_lrc8123	metabolic process	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_lrc8123	oxidation reduction	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_lrc32694	biopolymer modification	other metabolic processes	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_lrc32694	RNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_lrc32694	tRNA processing	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_lrc32694	tRNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_s37381	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit B (EC 1.6.99.5) (NADH dehydrogenase I subunit B) (NDH-1 subunit B)
ruditapes_s37381	transport	transport	P	NADH-quinone oxidoreductase subunit B (EC 1.6.99.5) (NADH dehydrogenase I subunit B) (NDH-1 subunit B)
ruditapes_c13450	oxidation reduction	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes_c13450	glycine metabolic process	other metabolic processes	P	Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (Glycine cleavage system P-protein) (Glycine decarboxylase)
ruditapes_c8606	tricarboxylic acid cycle	other metabolic processes	P	Fumarate hydratase class II (Fumarase C) (EC 4.2.1.2)
ruditapes_c8606	fumarate metabolic process	other metabolic processes	P	Fumarate hydratase class II (Fumarase C) (EC 4.2.1.2)
ruditapes_c20164	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome aa3 subunit 2) (Cytochrome c oxidase polypeptide II) (Oxidase aa(3) subunit 2)
ruditapes_c20164	transport	transport	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome aa3 subunit 2) (Cytochrome c oxidase polypeptide II) (Oxidase aa(3) subunit 2)
ruditapes_c20164	respiratory electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome aa3 subunit 2) (Cytochrome c oxidase polypeptide II) (Oxidase aa(3) subunit 2)
ruditapes_c20164	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome aa3 subunit 2) (Cytochrome c oxidase polypeptide II) (Oxidase aa(3) subunit 2)
ruditapes_c14667	urea metabolic process	other metabolic processes	P	Urease subunit gamma (EC 3.5.1.5) (Urea amidohydrolase subunit gamma)
ruditapes_c11824	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c11824	cellular amino acid biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c14613	tRNA aminoacylation for protein translation	protein metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_c14613	tRNA aminoacylation for protein translation	RNA metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_c14613	translation	protein metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_c14613	tryptophanyl-tRNA aminoacylation	protein metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_c14613	tryptophanyl-tRNA aminoacylation	RNA metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_c7054	thiamin biosynthetic process	other metabolic processes	P	Thiamine biosynthesis multifunctional protein ThiED [Includes: Thiamine-phosphate synthase (TMP-PPase) (TP synthase) (TPS) (EC 2.5.1.3) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase); Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase (EC 2.7.1.49) (EC 2.7.4.7) (Hydroxymethylpyrimidine kinase) (HMP kinase) (Hydroxymethylpyrimidine phosphate kinase) (HMP-P kinase) (HMP-phosphate kinase) (HMPP kinase)]
ruditapes_c7054	phosphorylation	other metabolic processes	P	Thiamine biosynthesis multifunctional protein ThiED [Includes: Thiamine-phosphate synthase (TMP-PPase) (TP synthase) (TPS) (EC 2.5.1.3) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase); Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase (EC 2.7.1.49) (EC 2.7.4.7) (Hydroxymethylpyrimidine kinase) (HMP kinase) (Hydroxymethylpyrimidine phosphate kinase) (HMP-P kinase) (HMP-phosphate kinase) (HMPP kinase)]
ruditapes_c7054	metabolic process	other metabolic processes	P	Thiamine biosynthesis multifunctional protein ThiED [Includes: Thiamine-phosphate synthase (TMP-PPase) (TP synthase) (TPS) (EC 2.5.1.3) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase); Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase (EC 2.7.1.49) (EC 2.7.4.7) (Hydroxymethylpyrimidine kinase) (HMP kinase) (Hydroxymethylpyrimidine phosphate kinase) (HMP-P kinase) (HMP-phosphate kinase) (HMPP kinase)]
ruditapes2_c1181	phosphorylation	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes2_c1181	threonine biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes2_c1181	cellular amino acid biosynthetic process	other metabolic processes	P	Homoserine kinase (HK) (HSK) (EC 2.7.1.39)
ruditapes_c22873	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c22873	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c22873	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc38648	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase pknA2 (EC 2.7.11.1)
ruditapes_lrc38648	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase pknA2 (EC 2.7.11.1)
ruditapes_c24695	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c24695	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c24134	antibiotic biosynthetic process	other metabolic processes	P	"L-glutamine:2-deoxy-scyllo-inosose aminotransferase (L-glutamine:DOI aminotransferase) (EC 2.6.1.100) (L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase) (L-glutamine:amino-DOI aminotransferase) (EC 2.6.1.101)"
ruditapes_c29403	carbohydrate metabolic process	other metabolic processes	P	GlcNAc-binding protein A
ruditapes_s39117	transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_s39117	ATP catabolic process	other metabolic processes	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_s39117	amino acid transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_s39117	methionine transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_c20564	biotin biosynthetic process	other metabolic processes	P	Pimelyl-[acyl-carrier protein] methyl ester esterase (EC 3.1.1.85) (Biotin synthesis protein BioH) (Carboxylesterase BioH)
ruditapes2_lrc4888	oxidation reduction	other metabolic processes	P	Tetrahydrocannabinolic acid synthase (THCAS) (EC 1.21.3.7) (Delta(1)-tetrahydrocannabinolic acid synthase) (THCA synthase)
ruditapes_c1255	oxidation reduction	other metabolic processes	P	Tetrahydrocannabinolic acid synthase (THCAS) (EC 1.21.3.7) (Delta(1)-tetrahydrocannabinolic acid synthase) (THCA synthase)
ruditapes_c17963	defense response to bacterium	stress response	P	Cysteine-rich repeat secretory protein 2 (Cysteine-rich repeat protein HWI1) (Protein HOPW1-1-INDUCED 1)
ruditapes_c17963	response to other organism	other biological processes	P	Cysteine-rich repeat secretory protein 2 (Cysteine-rich repeat protein HWI1) (Protein HOPW1-1-INDUCED 1)
ruditapes_c17514	biological_process	other biological processes	P	Uncharacterized membrane protein At3g27390
ruditapes2_c2556	carbohydrate metabolic process	other metabolic processes	P	"Alpha-L-fucosidase 1 (EC 3.2.1.51) (Alpha-1,3/4-fucosidase) (AtFUC1) (Alpha-L-fucoside fucohydrolase)"
ruditapes2_c2556	metabolic process	other metabolic processes	P	"Alpha-L-fucosidase 1 (EC 3.2.1.51) (Alpha-1,3/4-fucosidase) (AtFUC1) (Alpha-L-fucoside fucohydrolase)"
ruditapes2_c2556	glycoprotein catabolic process	other metabolic processes	P	"Alpha-L-fucosidase 1 (EC 3.2.1.51) (Alpha-1,3/4-fucosidase) (AtFUC1) (Alpha-L-fucoside fucohydrolase)"
ruditapes_c22226	oxidation reduction	other metabolic processes	P	"Alternative NAD(P)H dehydrogenase 1, mitochondrial (EC 1.6.-.-) (Internal non-phosphorylating NAD(P)H dehydrogenase 1) (AtNDI1)"
ruditapes_c21713	chloroplast organization	cell organization and biogenesis	P	"Pentatricopeptide repeat-containing protein At4g16390, chloroplastic (Chloroplastic RNA-binding protein P67)"
ruditapes_c20245	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor MYB39 (Myb-related protein 39) (AtMYB39)
ruditapes_c27757	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c27757	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c27757	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_c15302	proteolysis	protein metabolism	P	Probable isoaspartyl peptidase/L-asparaginase 2 (EC 3.4.19.5) (L-asparagine amidohydrolase 2) [Cleaved into: Isoaspartyl peptidase/L-asparaginase 2 subunit alpha; Isoaspartyl peptidase/L-asparaginase 2 subunit beta]
ruditapes_c19577	calcium-mediated signaling	signal transduction	P	Glutamate receptor 3.4 (AtGLR4) (Ligand-gated ion channel 3.4)
ruditapes_c19577	response to wounding	stress response	P	Glutamate receptor 3.4 (AtGLR4) (Ligand-gated ion channel 3.4)
ruditapes_c19577	G-protein coupled receptor protein signaling pathway	signal transduction	P	Glutamate receptor 3.4 (AtGLR4) (Ligand-gated ion channel 3.4)
ruditapes_c19577	response to stress	stress response	P	Glutamate receptor 3.4 (AtGLR4) (Ligand-gated ion channel 3.4)
ruditapes_c19577	calcium ion transport	transport	P	Glutamate receptor 3.4 (AtGLR4) (Ligand-gated ion channel 3.4)
ruditapes_c19577	transmembrane calcium ion transport	transport	P	Glutamate receptor 3.4 (AtGLR4) (Ligand-gated ion channel 3.4)
ruditapes_c19577	ionotropic glutamate receptor signaling pathway	signal transduction	P	Glutamate receptor 3.4 (AtGLR4) (Ligand-gated ion channel 3.4)
ruditapes_c19577	transport	transport	P	Glutamate receptor 3.4 (AtGLR4) (Ligand-gated ion channel 3.4)
ruditapes_c19577	ion transport	transport	P	Glutamate receptor 3.4 (AtGLR4) (Ligand-gated ion channel 3.4)
ruditapes_c19577	cellular response to cold	stress response	P	Glutamate receptor 3.4 (AtGLR4) (Ligand-gated ion channel 3.4)
ruditapes_c30717	phosphate transport	transport	P	Probable inorganic phosphate transporter 1-5 (AtPht1;5) (H(+)/Pi cotransporter)
ruditapes_c30717	transport	transport	P	Probable inorganic phosphate transporter 1-5 (AtPht1;5) (H(+)/Pi cotransporter)
ruditapes_c30717	transmembrane transport	transport	P	Probable inorganic phosphate transporter 1-5 (AtPht1;5) (H(+)/Pi cotransporter)
ruditapes_c11297	metabolic process	other metabolic processes	P	"1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal (DHNS) (EC 4.1.3.36) (Enoyl-CoA hydratase/isomerase D) (ECHID) (Naphthoate synthase)"
ruditapes_c11297	menaquinone biosynthetic process	other metabolic processes	P	"1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal (DHNS) (EC 4.1.3.36) (Enoyl-CoA hydratase/isomerase D) (ECHID) (Naphthoate synthase)"
ruditapes_c11297	phylloquinone biosynthetic process	other metabolic processes	P	"1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal (DHNS) (EC 4.1.3.36) (Enoyl-CoA hydratase/isomerase D) (ECHID) (Naphthoate synthase)"
ruditapes_c26111	cellular amino acid metabolic process	other metabolic processes	P	Probable aminotransferase ACS12 (EC 2.6.1.-)
ruditapes_c26111	biosynthetic process	other metabolic processes	P	Probable aminotransferase ACS12 (EC 2.6.1.-)
ruditapes_c26111	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	Probable aminotransferase ACS12 (EC 2.6.1.-)
ruditapes_c19059	phospholipid metabolic process	other metabolic processes	P	Phospholipase A2-beta (EC 3.1.1.4) (Secretory phospholipase A2-beta) (AtsPLA2-beta)
ruditapes_c19059	lipid catabolic process	other metabolic processes	P	Phospholipase A2-beta (EC 3.1.1.4) (Secretory phospholipase A2-beta) (AtsPLA2-beta)
ruditapes_c19059	regulation of stomatal movement	other biological processes	P	Phospholipase A2-beta (EC 3.1.1.4) (Secretory phospholipase A2-beta) (AtsPLA2-beta)
ruditapes_c19059	pollen development	developmental processes	P	Phospholipase A2-beta (EC 3.1.1.4) (Secretory phospholipase A2-beta) (AtsPLA2-beta)
ruditapes_c19059	response to light stimulus	other biological processes	P	Phospholipase A2-beta (EC 3.1.1.4) (Secretory phospholipase A2-beta) (AtsPLA2-beta)
ruditapes2_c1642	carbohydrate transport	transport	P	"Phosphoenolpyruvate/phosphate translocator 2, chloroplastic (AtPPT2)"
ruditapes2_c1642	phosphoenolpyruvate transport	transport	P	"Phosphoenolpyruvate/phosphate translocator 2, chloroplastic (AtPPT2)"
ruditapes2_c1642	phosphoglycerate transport	transport	P	"Phosphoenolpyruvate/phosphate translocator 2, chloroplastic (AtPPT2)"
ruditapes2_c1642	transport	transport	P	"Phosphoenolpyruvate/phosphate translocator 2, chloroplastic (AtPPT2)"
ruditapes_c9405	transport	transport	P	"Protein TIC 62, chloroplastic (Translocon at the inner envelope membrane of chloroplasts 62) (AtTIC62)"
ruditapes_c9405	protein transport	transport	P	"Protein TIC 62, chloroplastic (Translocon at the inner envelope membrane of chloroplasts 62) (AtTIC62)"
ruditapes_c14965	response to abiotic stimulus	other biological processes	P	Cysteine proteinase inhibitor 6 (AtCYS-6) (PIP-M) (PRLI-interacting factor M)
ruditapes_c14965	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 6 (AtCYS-6) (PIP-M) (PRLI-interacting factor M)
ruditapes_c14965	defense response	stress response	P	Cysteine proteinase inhibitor 6 (AtCYS-6) (PIP-M) (PRLI-interacting factor M)
ruditapes_c21373	cell division	other biological processes	P	Anaphase-promoting complex subunit 5 (Cyclosome subunit 5)
ruditapes_c21373	cell cycle	cell cycle and proliferation	P	Anaphase-promoting complex subunit 5 (Cyclosome subunit 5)
ruditapes_c21373	biological_process	other biological processes	P	Anaphase-promoting complex subunit 5 (Cyclosome subunit 5)
ruditapes_c21373	mitosis	cell cycle and proliferation	P	Anaphase-promoting complex subunit 5 (Cyclosome subunit 5)
ruditapes_c21373	mitosis	cell organization and biogenesis	P	Anaphase-promoting complex subunit 5 (Cyclosome subunit 5)
ruditapes_c13362	protein transport	transport	P	Secretory carrier-associated membrane protein 1 (Secretory carrier membrane protein 1)
ruditapes_c13362	transport	transport	P	Secretory carrier-associated membrane protein 1 (Secretory carrier membrane protein 1)
ruditapes_c18457	transmembrane transport	transport	P	Probable inorganic phosphate transporter 1-9 (OsPT9) (OsPht1;9) (H(+)/Pi cotransporter)
ruditapes_c18457	phosphate transport	transport	P	Probable inorganic phosphate transporter 1-9 (OsPT9) (OsPht1;9) (H(+)/Pi cotransporter)
ruditapes_c18457	transport	transport	P	Probable inorganic phosphate transporter 1-9 (OsPT9) (OsPht1;9) (H(+)/Pi cotransporter)
ruditapes_c29586	transmembrane transport	transport	P	Probable inorganic phosphate transporter 1-7 (OsPT7) (OsPht1;7) (H(+)/Pi cotransporter)
ruditapes_c29586	transport	transport	P	Probable inorganic phosphate transporter 1-7 (OsPT7) (OsPht1;7) (H(+)/Pi cotransporter)
ruditapes_c29586	response to abscisic acid stimulus	other biological processes	P	Probable inorganic phosphate transporter 1-7 (OsPT7) (OsPht1;7) (H(+)/Pi cotransporter)
ruditapes_c29586	phosphate transport	transport	P	Probable inorganic phosphate transporter 1-7 (OsPT7) (OsPht1;7) (H(+)/Pi cotransporter)
ruditapes_c29586	cellular response to phosphate starvation	stress response	P	Probable inorganic phosphate transporter 1-7 (OsPT7) (OsPht1;7) (H(+)/Pi cotransporter)
ruditapes_c20394	plant-type cell wall biogenesis	other biological processes	P	Probable UDP-arabinose 4-epimerase 1 (EC 5.1.3.5) (OsUEL-1) (UDP-D-xylose 4-epimerase 1) (UDP-galactose 4-epimerase-like protein 1)
ruditapes_c20394	cellular metabolic process	other metabolic processes	P	Probable UDP-arabinose 4-epimerase 1 (EC 5.1.3.5) (OsUEL-1) (UDP-D-xylose 4-epimerase 1) (UDP-galactose 4-epimerase-like protein 1)
ruditapes_c20394	carbohydrate metabolic process	other metabolic processes	P	Probable UDP-arabinose 4-epimerase 1 (EC 5.1.3.5) (OsUEL-1) (UDP-D-xylose 4-epimerase 1) (UDP-galactose 4-epimerase-like protein 1)
ruditapes_c20394	galactose metabolic process	other metabolic processes	P	Probable UDP-arabinose 4-epimerase 1 (EC 5.1.3.5) (OsUEL-1) (UDP-D-xylose 4-epimerase 1) (UDP-galactose 4-epimerase-like protein 1)
ruditapes_c20394	arabinose biosynthetic process	other metabolic processes	P	Probable UDP-arabinose 4-epimerase 1 (EC 5.1.3.5) (OsUEL-1) (UDP-D-xylose 4-epimerase 1) (UDP-galactose 4-epimerase-like protein 1)
ruditapes_c26849	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta' C-terminal section (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' C-terminal section) (RNA polymerase beta' C-terminal section)
ruditapes_c14509	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c14509	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes2_c886	translation	protein metabolism	P	60S ribosomal protein L29
ruditapes_c7557	negative regulation of neuron apoptosis	death	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	neurofilament cytoskeleton organization	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	hydrogen peroxide biosynthetic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	embryo implantation	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	retina homeostasis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	heart contraction	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	muscle maintenance	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	superoxide metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	oxidation reduction	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	ovarian follicle development	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	transmission of nerve impulse	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	DNA fragmentation involved in apoptosis	DNA metabolism	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	DNA fragmentation involved in apoptosis	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	DNA fragmentation involved in apoptosis	death	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	response to ethanol	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	response to drug	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	removal of superoxide radicals	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	regulation of multicellular organism growth	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	response to axon injury	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	positive regulation of catalytic activity	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	sensory perception of sound	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	regulation of mitochondrial membrane potential	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	positive regulation of cytokine production	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	myeloid cell homeostasis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	response to hydrogen peroxide	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	response to reactive oxygen species	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	negative regulation of cholesterol biosynthetic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	spermatogenesis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	activation of MAPK activity	signal transduction	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	activation of MAPK activity	protein metabolism	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	double-strand break repair	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	double-strand break repair	DNA metabolism	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	aging	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	cell aging	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	locomotory behavior	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	regulation of blood pressure	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	response to heat	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	auditory receptor cell stereocilium organization	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	auditory receptor cell stereocilium organization	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	cellular iron ion homeostasis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	response to oxidative stress	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	myelin maintenance in the peripheral nervous system	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	myelin maintenance in the peripheral nervous system	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	relaxation of vascular smooth muscle	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	response to superoxide	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	regulation of protein kinase activity	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	glutathione metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	superoxide anion generation	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	response to organic substance	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c7557	negative regulation of apoptosis	death	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	response to heat	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	embryo implantation	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	response to organic substance	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	myelin maintenance in the peripheral nervous system	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	myelin maintenance in the peripheral nervous system	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	glutathione metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	hydrogen peroxide biosynthetic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	double-strand break repair	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	double-strand break repair	DNA metabolism	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	spermatogenesis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	regulation of multicellular organism growth	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	positive regulation of catalytic activity	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	response to superoxide	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	retina homeostasis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	response to hydrogen peroxide	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	cellular iron ion homeostasis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	activation of MAPK activity	signal transduction	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	activation of MAPK activity	protein metabolism	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	heart contraction	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	muscle maintenance	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	regulation of protein kinase activity	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	response to drug	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	oxidation reduction	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	neurofilament cytoskeleton organization	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	negative regulation of cholesterol biosynthetic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	cell aging	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	negative regulation of neuron apoptosis	death	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	DNA fragmentation involved in apoptosis	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	DNA fragmentation involved in apoptosis	death	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	removal of superoxide radicals	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	locomotory behavior	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	auditory receptor cell stereocilium organization	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	auditory receptor cell stereocilium organization	cell organization and biogenesis	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	sensory perception of sound	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	response to axon injury	stress response	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	superoxide metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	response to ethanol	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	transmission of nerve impulse	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	DNA fragmentation involved in apoptosis	DNA metabolism	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	positive regulation of cytokine production	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	myeloid cell homeostasis	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	regulation of mitochondrial membrane potential	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	relaxation of vascular smooth muscle	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	regulation of blood pressure	other biological processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c17102	ovarian follicle development	developmental processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c19388	transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c19388	ATP catabolic process	other metabolic processes	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c19388	transmembrane transport	transport	P	Multidrug resistance-associated protein 1 (ATP-binding cassette sub-family C member 1) (Leukotriene C(4) transporter) (LTC4 transporter)
ruditapes_c12103	transport	transport	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes_c12103	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes_c12103	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51kD) (CI-51kD) (NADH-ubiquinone oxidoreductase 51 kDa subunit)"
ruditapes_c8395	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c353	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c11764	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c1301	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c543	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc34479	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c1301	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c8395	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c27522	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c11764	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_c27522	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c543	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c353	sphingolipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes_lrc34479	lipid metabolic process	other metabolic processes	P	Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3)
ruditapes2_c1754	electron transport chain	other metabolic processes	P	"Electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes2_c1754	transport	transport	P	"Electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF)"
ruditapes_c2631	transport	transport	P	Mitochondrial carnitine/acylcarnitine carrier protein (Carnitine/acylcarnitine translocase) (CAC) (Solute carrier family 25 member 20)
ruditapes_c10315	fatty acid metabolic process	other metabolic processes	P	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial (VLCAD) (EC 1.3.8.9)"
ruditapes_c10315	lipid metabolic process	other metabolic processes	P	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial (VLCAD) (EC 1.3.8.9)"
ruditapes_c10315	oxidation reduction	other metabolic processes	P	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial (VLCAD) (EC 1.3.8.9)"
ruditapes_c10315	metabolic process	other metabolic processes	P	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial (VLCAD) (EC 1.3.8.9)"
ruditapes_c18167	endocytosis	transport	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c18167	endocytosis	cell organization and biogenesis	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c18167	innate immune response	stress response	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c18167	cell adhesion	cell adhesion	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c10613	innate immune response	stress response	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c10613	endocytosis	transport	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c10613	endocytosis	cell organization and biogenesis	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c10613	cell adhesion	cell adhesion	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c31147	innate immune response	stress response	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c31147	cell adhesion	cell adhesion	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c31147	endocytosis	transport	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c31147	endocytosis	cell organization and biogenesis	P	CD209 antigen (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN1) (CD antigen CD209)
ruditapes_c18292	innate immune response	stress response	P	C-type lectin domain family 4 member M (CD209 antigen-like protein 1) (CD antigen CD299)
ruditapes_c18292	endocytosis	transport	P	C-type lectin domain family 4 member M (CD209 antigen-like protein 1) (CD antigen CD299)
ruditapes_c18292	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 4 member M (CD209 antigen-like protein 1) (CD antigen CD299)
ruditapes_c30526	proteolysis	protein metabolism	P	Cathepsin S (EC 3.4.22.27)
ruditapes_c19567	gluconeogenesis	other metabolic processes	P	"Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (PEPCK-C) (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase)"
ruditapes_c19567	internal protein amino acid acetylation	protein metabolism	P	"Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (PEPCK-C) (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase)"
ruditapes2_c2292	"regulation of transcription, DNA-dependent"	RNA metabolism	P	AP2/ERF domain-containing protein PFD0985w (ApiAP2)
ruditapes2_c2292	"transcription, DNA-dependent"	RNA metabolism	P	AP2/ERF domain-containing protein PFD0985w (ApiAP2)
ruditapes_c232	RNA modification	RNA metabolism	P	MATH and LRR domain-containing protein PFE0570w
ruditapes_c27391	pseudouridine synthesis	RNA metabolism	P	MATH and LRR domain-containing protein PFE0570w
ruditapes_c27391	RNA modification	RNA metabolism	P	MATH and LRR domain-containing protein PFE0570w
ruditapes_c232	pseudouridine synthesis	RNA metabolism	P	MATH and LRR domain-containing protein PFE0570w
ruditapes_c19710	translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c19710	prolyl-tRNA aminoacylation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c19710	prolyl-tRNA aminoacylation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c19710	tRNA aminoacylation for protein translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c19710	tRNA aminoacylation for protein translation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_lrc26816	intracellular protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc26816	transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc26816	protein transport	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_lrc26816	protein targeting	transport	P	Protein transport protein Sec61 subunit gamma
ruditapes_c17941	proteolysis	protein metabolism	P	Retrovirus-related Pol polyprotein from transposon opus [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c17941	DNA integration	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon opus [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c17941	"transposition, DNA-mediated"	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon opus [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c17941	RNA-dependent DNA replication	DNA metabolism	P	Retrovirus-related Pol polyprotein from transposon opus [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
ruditapes_c3401	cell proliferation	cell cycle and proliferation	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c3401	positive regulation of histone acetylation	protein metabolism	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c3401	positive regulation of histone acetylation	cell organization and biogenesis	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c3401	histone H3 acetylation	protein metabolism	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c3401	histone H3 acetylation	cell organization and biogenesis	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c3401	wing disc pattern formation	developmental processes	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c3401	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c3401	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c3401	eye pigment metabolic process	other metabolic processes	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c3401	chromatin remodeling	cell organization and biogenesis	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c3401	axon target recognition	developmental processes	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c3401	axon target recognition	cell organization and biogenesis	P	Transcriptional adapter 2B (dADA2b)
ruditapes_c7049	microtubule-based movement	other biological processes	P	Dynein heavy chain-like protein MAL7P1.162
ruditapes_c7049	ATP catabolic process	other metabolic processes	P	Dynein heavy chain-like protein MAL7P1.162
ruditapes_c27531	oxidation reduction	other metabolic processes	P	Hemocyanin subunit B
ruditapes_c27531	oxygen transport	transport	P	Hemocyanin subunit B
ruditapes_c27531	metabolic process	other metabolic processes	P	Hemocyanin subunit B
ruditapes_c27531	transport	transport	P	Hemocyanin subunit B
ruditapes_c4608	response to oxidative stress	stress response	P	Protein Turandot X
ruditapes_c4608	cellular response to heat	stress response	P	Protein Turandot X
ruditapes_c4608	innate immune response	stress response	P	Protein Turandot X
ruditapes_c4608	response to heat	stress response	P	Protein Turandot X
ruditapes_c4608	response to bacterium	other biological processes	P	Protein Turandot X
ruditapes_c4608	cellular response to oxidative stress	stress response	P	Protein Turandot X
ruditapes_s38949	oxidation reduction	other metabolic processes	P	Methionine-R-sulfoxide reductase B1 (EC 1.8.4.-) (Selenoprotein R)
ruditapes_c12644	endocytosis	transport	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	endocytosis	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	endocytosis	transport	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	endocytosis	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	positive regulation of phagocytosis	transport	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	positive regulation of phagocytosis	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	phagocytosis	transport	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	phagocytosis	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	positive regulation of phagocytosis	transport	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	positive regulation of phagocytosis	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	small GTPase mediated signal transduction	signal transduction	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	positive regulation of protein kinase B signaling cascade	signal transduction	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	Ras protein signal transduction	signal transduction	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	cell motion	other biological processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	positive regulation of adenylate cyclase activity	other metabolic processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	sexual reproduction	other biological processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	chemotaxis	other biological processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	negative regulation of cell motion	other biological processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	cytokinesis	other biological processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	cortical actin cytoskeleton organization	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	regulation of small GTPase mediated signal transduction	signal transduction	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	chemotaxis	other biological processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	positive regulation of endocytosis	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	small GTPase mediated signal transduction	signal transduction	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	aggregation involved in sorocarp development	stress response	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	aggregation involved in sorocarp development	developmental processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	Ras protein signal transduction	signal transduction	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	cytokinesis	other biological processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	multicellular organismal development	developmental processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	actin filament organization	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	actin filament organization	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	phagocytosis	transport	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	phagocytosis	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	positive regulation of endocytosis	transport	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	aggregation involved in sorocarp development	developmental processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	positive regulation of endocytosis	transport	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	positive regulation of endocytosis	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	positive regulation of protein kinase B signaling cascade	signal transduction	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	negative regulation of cell motion	other biological processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	multicellular organismal development	developmental processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	sexual reproduction	other biological processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	cell motion	other biological processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	positive regulation of adenylate cyclase activity	other metabolic processes	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	regulation of small GTPase mediated signal transduction	signal transduction	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c12644	cortical actin cytoskeleton organization	cell organization and biogenesis	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c29105	aggregation involved in sorocarp development	stress response	P	Ras guanine nucleotide exchange factor B (RasGEF domain-containing protein B)
ruditapes_c30451	carbohydrate metabolic process	other metabolic processes	P	"Beta-1,3-glucan-binding protein 2 (BGBP-2) (Beta-1,3-glucan recognition protein 2) (BetaGRP-2)"
ruditapes_c30451	innate immune response	stress response	P	"Beta-1,3-glucan-binding protein 2 (BGBP-2) (Beta-1,3-glucan recognition protein 2) (BetaGRP-2)"
ruditapes_c30451	regulation of innate immune response	stress response	P	"Beta-1,3-glucan-binding protein 2 (BGBP-2) (Beta-1,3-glucan recognition protein 2) (BetaGRP-2)"
ruditapes2_lrc5750	translation	protein metabolism	P	40S ribosomal protein S18
ruditapes_lrc33732	translation	protein metabolism	P	40S ribosomal protein S18
ruditapes_lrc32583	translation	protein metabolism	P	40S ribosomal protein S18
ruditapes_lrc39351	translation	protein metabolism	P	40S ribosomal protein S18
ruditapes_lrc38572	translation	protein metabolism	P	40S ribosomal protein S18
ruditapes2_c259	translation	protein metabolism	P	40S ribosomal protein S18
ruditapes_c25548	proteolysis	protein metabolism	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes_c25548	angiogenesis	developmental processes	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes_c25548	fibrinolysis	stress response	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes_c25548	extracellular matrix organization	cell organization and biogenesis	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes_c30463	toll-like receptor 3 signaling pathway	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	toll-like receptor 3 signaling pathway	stress response	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	defense response to virus	stress response	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	macrophage activation during immune response	other biological processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of nitric oxide biosynthetic process	other metabolic processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	MyD88-dependent toll-like receptor signaling pathway	stress response	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	Toll signaling pathway	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	response to exogenous dsRNA	other biological processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	response to lipopolysaccharide	other biological processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	toll-like receptor 2 signaling pathway	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	toll-like receptor 2 signaling pathway	stress response	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	toll-like receptor 1 signaling pathway	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	toll-like receptor 1 signaling pathway	stress response	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	MyD88-independent toll-like receptor signaling pathway	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	MyD88-independent toll-like receptor signaling pathway	stress response	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	toll-like receptor signaling pathway	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	toll-like receptor signaling pathway	stress response	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	induction of apoptosis by extracellular signals	death	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of protein binding	other biological processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of protein ubiquitination	protein metabolism	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of interleukin-6 production	other biological processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of tumor necrosis factor production	other biological processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	toll-like receptor 4 signaling pathway	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	toll-like receptor 4 signaling pathway	stress response	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of chemokine biosynthetic process	other metabolic processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	innate immune response	stress response	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	apoptosis	death	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	regulation of protein homodimerization activity	other biological processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	lipopolysaccharide-mediated signaling pathway	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	response to virus	other biological processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	signal transduction	signal transduction	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of B cell activation	other biological processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of interferon-beta biosynthetic process	other metabolic processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	inflammatory response	stress response	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of type I interferon production	other biological processes	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c30463	positive regulation of B cell proliferation	cell cycle and proliferation	P	"TIR domain-containing adapter molecule 1 (TICAM-1) (Proline-rich, vinculin and TIR domain-containing protein B) (Putative NF-kappa-B-activating protein 502H) (Toll-interleukin-1 receptor domain-containing adapter protein inducing interferon beta) (MyD88-3) (TIR domain-containing adapter protein inducing IFN-beta)"
ruditapes_c20955	nervous system development	developmental processes	P	RNA-binding protein 45 (Developmentally-regulated RNA-binding protein 1) (RB-1) (RNA-binding motif protein 45)
ruditapes_c20955	multicellular organismal development	developmental processes	P	RNA-binding protein 45 (Developmentally-regulated RNA-binding protein 1) (RB-1) (RNA-binding motif protein 45)
ruditapes_c20955	cell differentiation	other biological processes	P	RNA-binding protein 45 (Developmentally-regulated RNA-binding protein 1) (RB-1) (RNA-binding motif protein 45)
ruditapes_c18441	endocytosis	transport	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c18441	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes2_c3527	innate immune response	stress response	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c7013	endocytosis	transport	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c7013	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c17375	innate immune response	stress response	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c4832	endocytosis	transport	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c4832	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c5200	endocytosis	transport	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c5200	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c33084	endocytosis	transport	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c33084	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes2_c2034	endocytosis	transport	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes2_c2034	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c17375	endocytosis	transport	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c17375	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c15107	endocytosis	transport	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c15107	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes2_c3527	endocytosis	transport	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes2_c3527	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes2_c2034	innate immune response	stress response	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c4832	innate immune response	stress response	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c7869	endocytosis	transport	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c7869	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c7869	innate immune response	stress response	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c7013	innate immune response	stress response	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c5200	innate immune response	stress response	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c33084	innate immune response	stress response	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c15107	innate immune response	stress response	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c18441	innate immune response	stress response	P	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (Macrophage lectin 2) (CD antigen CD301)
ruditapes_c9950	muscle organ development	developmental processes	P	Adipocyte enhancer-binding protein 1 (AE-binding protein 1) (Aortic carboxypeptidase-like protein)
ruditapes_c9950	skeletal system development	developmental processes	P	Adipocyte enhancer-binding protein 1 (AE-binding protein 1) (Aortic carboxypeptidase-like protein)
ruditapes_c9950	"transcription, DNA-dependent"	RNA metabolism	P	Adipocyte enhancer-binding protein 1 (AE-binding protein 1) (Aortic carboxypeptidase-like protein)
ruditapes_c9950	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Adipocyte enhancer-binding protein 1 (AE-binding protein 1) (Aortic carboxypeptidase-like protein)
ruditapes_c9950	proteolysis	protein metabolism	P	Adipocyte enhancer-binding protein 1 (AE-binding protein 1) (Aortic carboxypeptidase-like protein)
ruditapes_c9950	cell adhesion	cell adhesion	P	Adipocyte enhancer-binding protein 1 (AE-binding protein 1) (Aortic carboxypeptidase-like protein)
ruditapes_c19256	regulation of Rab GTPase activity	signal transduction	P	Carabin (TBC1 domain family member 10C)
ruditapes_c19256	positive regulation of Rab GTPase activity	signal transduction	P	Carabin (TBC1 domain family member 10C)
ruditapes_c19256	positive regulation of GTPase activity	other biological processes	P	Carabin (TBC1 domain family member 10C)
ruditapes_c2898	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_lrc36930	microtubule-based movement	other biological processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_lrc34468	microtubule-based movement	other biological processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_c27681	microtubule-based movement	other biological processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_c4266	microtubule-based movement	other biological processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_c2898	microtubule-based movement	other biological processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_lrc32801	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_c19058	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_lrc36413	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_c13887	microtubule-based movement	other biological processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_lrc36413	microtubule-based movement	other biological processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_c27681	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_lrc32801	microtubule-based movement	other biological processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_c19058	microtubule-based movement	other biological processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_lrc36930	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_lrc34468	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_c13887	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_c4266	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 10, axonemal (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)"
ruditapes_c8601	JNK cascade	signal transduction	P	Mitogen-activated protein kinase kinase kinase kinase 3 (EC 2.7.11.1) (Germinal center kinase-related protein kinase) (GLK) (MAPK/ERK kinase kinase kinase 3) (MEK kinase kinase 3) (MEKKK 3)
ruditapes_c8601	JNK cascade	stress response	P	Mitogen-activated protein kinase kinase kinase kinase 3 (EC 2.7.11.1) (Germinal center kinase-related protein kinase) (GLK) (MAPK/ERK kinase kinase kinase 3) (MEK kinase kinase 3) (MEKKK 3)
ruditapes_c8601	response to stress	stress response	P	Mitogen-activated protein kinase kinase kinase kinase 3 (EC 2.7.11.1) (Germinal center kinase-related protein kinase) (GLK) (MAPK/ERK kinase kinase kinase 3) (MEK kinase kinase 3) (MEKKK 3)
ruditapes_c8601	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase kinase kinase kinase 3 (EC 2.7.11.1) (Germinal center kinase-related protein kinase) (GLK) (MAPK/ERK kinase kinase kinase 3) (MEK kinase kinase 3) (MEKKK 3)
ruditapes_c8601	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase kinase kinase kinase 3 (EC 2.7.11.1) (Germinal center kinase-related protein kinase) (GLK) (MAPK/ERK kinase kinase kinase 3) (MEK kinase kinase 3) (MEKKK 3)
ruditapes_c8601	protein kinase cascade	signal transduction	P	Mitogen-activated protein kinase kinase kinase kinase 3 (EC 2.7.11.1) (Germinal center kinase-related protein kinase) (GLK) (MAPK/ERK kinase kinase kinase 3) (MEK kinase kinase 3) (MEKKK 3)
ruditapes_c9210	lipid biosynthetic process	other metabolic processes	P	"Malonyl-CoA-acyl carrier protein transacylase, mitochondrial (MCT) (EC 2.3.1.39) (Mitochondrial malonyl CoA:ACP acyltransferase) (Mitochondrial malonyltransferase) ([Acyl-carrier-protein] malonyltransferase)"
ruditapes_c9210	fatty acid biosynthetic process	other metabolic processes	P	"Malonyl-CoA-acyl carrier protein transacylase, mitochondrial (MCT) (EC 2.3.1.39) (Mitochondrial malonyl CoA:ACP acyltransferase) (Mitochondrial malonyltransferase) ([Acyl-carrier-protein] malonyltransferase)"
ruditapes_c9210	metabolic process	other metabolic processes	P	"Malonyl-CoA-acyl carrier protein transacylase, mitochondrial (MCT) (EC 2.3.1.39) (Mitochondrial malonyl CoA:ACP acyltransferase) (Mitochondrial malonyltransferase) ([Acyl-carrier-protein] malonyltransferase)"
ruditapes_c15241	sensory perception of sound	other biological processes	P	Lipoxygenase homology domain-containing protein 1
ruditapes_c14009	metabolic process	other metabolic processes	P	Beta-galactosidase-1-like protein 2 (EC 3.2.1.-)
ruditapes_c14009	carbohydrate metabolic process	other metabolic processes	P	Beta-galactosidase-1-like protein 2 (EC 3.2.1.-)
ruditapes2_c2928	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 6 (PPIase) (EC 5.2.1.8) (Cyclophilin-like protein PPIL6) (Rotamase PPIL6)
ruditapes2_c2928	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 6 (PPIase) (EC 5.2.1.8) (Cyclophilin-like protein PPIL6) (Rotamase PPIL6)
ruditapes_c13035	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 6 (PPIase) (EC 5.2.1.8) (Cyclophilin-like protein PPIL6) (Rotamase PPIL6)
ruditapes_c13035	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 6 (PPIase) (EC 5.2.1.8) (Cyclophilin-like protein PPIL6) (Rotamase PPIL6)
ruditapes_c26884	regulation of ARF GTPase activity	signal transduction	P	Stromal membrane-associated protein 1
ruditapes_c26884	positive regulation of GTPase activity	other biological processes	P	Stromal membrane-associated protein 1
ruditapes_c26884	positive regulation of erythrocyte differentiation	developmental processes	P	Stromal membrane-associated protein 1
ruditapes_c26765	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 595
ruditapes_c26765	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 595
ruditapes_c15344	resolution of meiotic joint molecules as recombinants	cell cycle and proliferation	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c15344	resolution of meiotic joint molecules as recombinants	DNA metabolism	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c15344	response to DNA damage stimulus	stress response	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c14627	DNA repair	DNA metabolism	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c14627	DNA metabolic process	DNA metabolism	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c15344	replication fork processing	stress response	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c15344	replication fork processing	DNA metabolism	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c14627	replication fork processing	stress response	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c14627	replication fork processing	DNA metabolism	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c14627	DNA repair	stress response	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c15344	DNA metabolic process	DNA metabolism	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c14627	resolution of meiotic joint molecules as recombinants	cell cycle and proliferation	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c14627	resolution of meiotic joint molecules as recombinants	DNA metabolism	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c15344	DNA repair	stress response	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c15344	DNA repair	DNA metabolism	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c14627	response to DNA damage stimulus	stress response	P	Fanconi anemia group M protein (Protein FACM) (EC 3.6.4.13) (ATP-dependent RNA helicase FANCM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog)
ruditapes_c19591	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 683
ruditapes_c19591	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 683
ruditapes_c29547	nervous system development	developmental processes	P	Neurensin-1 (Neuro-p24) (Vesicular membrane protein of 24 kDa) (Vesicular membrane protein p24)
ruditapes_c25847	neutrophil activation	other biological processes	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	erythrocyte differentiation	developmental processes	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	cell cycle	cell cycle and proliferation	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	histone H3-K4 methylation	protein metabolism	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	histone H3-K4 methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	cell cycle arrest	cell cycle and proliferation	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	retinoic acid receptor signaling pathway	signal transduction	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	neutrophil mediated immunity	other biological processes	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	"transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	positive regulation of granulocyte differentiation	developmental processes	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c25847	DNA methylation	DNA metabolism	P	Histone-lysine N-methyltransferase MLL5 (EC 2.1.1.43) (Lysine N-methyltransferase 2E) (KMT2E) (Myeloid/lymphoid or mixed-lineage leukemia protein 5)
ruditapes_c6250	negative regulation of endopeptidase activity	other biological processes	P	C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
ruditapes_c11737	negative regulation of endopeptidase activity	other biological processes	P	C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
ruditapes_c6250	negative regulation of peptidase activity	other biological processes	P	C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
ruditapes_c313	negative regulation of peptidase activity	other biological processes	P	C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
ruditapes_c11737	negative regulation of peptidase activity	other biological processes	P	C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
ruditapes_c7187	negative regulation of peptidase activity	other biological processes	P	C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
ruditapes2_c718	negative regulation of peptidase activity	other biological processes	P	C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
ruditapes2_c718	negative regulation of endopeptidase activity	other biological processes	P	C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
ruditapes_c313	negative regulation of endopeptidase activity	other biological processes	P	C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
ruditapes_c7187	negative regulation of endopeptidase activity	other biological processes	P	C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
ruditapes_c2445	spermatogenesis	other biological processes	P	G-protein coupled receptor 64 (Human epididymis-specific protein 6) (He6)
ruditapes_c2445	signal transduction	signal transduction	P	G-protein coupled receptor 64 (Human epididymis-specific protein 6) (He6)
ruditapes_c2445	cell surface receptor linked signal transduction	signal transduction	P	G-protein coupled receptor 64 (Human epididymis-specific protein 6) (He6)
ruditapes_c2445	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 64 (Human epididymis-specific protein 6) (He6)
ruditapes_c2445	neuropeptide signaling pathway	signal transduction	P	G-protein coupled receptor 64 (Human epididymis-specific protein 6) (He6)
ruditapes_lrc13461	metabolic process	other metabolic processes	P	WD repeat and FYVE domain-containing protein 3 (Autophagy-linked FYVE protein) (Alfy)
ruditapes_c11142	forebrain neuroblast division	cell cycle and proliferation	P	Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog)
ruditapes_c11142	forebrain neuroblast division	developmental processes	P	Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog)
ruditapes_c11142	maintenance of centrosome location	other biological processes	P	Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog)
ruditapes_c11142	cell division	other biological processes	P	Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog)
ruditapes_c11142	cell cycle	cell cycle and proliferation	P	Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog)
ruditapes_c11142	negative regulation of asymmetric cell division	other biological processes	P	Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog)
ruditapes_c11142	negative regulation of neuron differentiation	developmental processes	P	Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog)
ruditapes_c11142	mitosis	cell cycle and proliferation	P	Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog)
ruditapes_c11142	mitosis	cell organization and biogenesis	P	Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog)
ruditapes_c876	cell differentiation	other biological processes	P	Mast/stem cell growth factor receptor kita (SCFR) (EC 2.7.10.1) (Tyrosine-protein kinase Kit)
ruditapes_c876	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Mast/stem cell growth factor receptor kita (SCFR) (EC 2.7.10.1) (Tyrosine-protein kinase Kit)
ruditapes_c876	phosphorylation	other metabolic processes	P	Mast/stem cell growth factor receptor kita (SCFR) (EC 2.7.10.1) (Tyrosine-protein kinase Kit)
ruditapes_c876	vascular endothelial growth factor receptor signaling pathway	signal transduction	P	Mast/stem cell growth factor receptor kita (SCFR) (EC 2.7.10.1) (Tyrosine-protein kinase Kit)
ruditapes_c876	protein amino acid phosphorylation	protein metabolism	P	Mast/stem cell growth factor receptor kita (SCFR) (EC 2.7.10.1) (Tyrosine-protein kinase Kit)
ruditapes_c23046	metabolic process	other metabolic processes	P	Glutathione S-transferase P 1 (EC 2.5.1.18) (GST class-pi) (GST-Pi) (XlGSTP1-1)
ruditapes_c23046	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase P 1 (EC 2.5.1.18) (GST class-pi) (GST-Pi) (XlGSTP1-1)
ruditapes2_c2336	cell redox homeostasis	other biological processes	P	Protein disulfide-isomerase A3 (EC 5.3.4.1) (Endoplasmic reticulum resident protein 57) (ER protein 57) (ERp57) (Glucose-regulated thiol oxidoreductase 58 kDa protein)
ruditapes2_c2336	positive regulation of apoptosis	death	P	Protein disulfide-isomerase A3 (EC 5.3.4.1) (Endoplasmic reticulum resident protein 57) (ER protein 57) (ERp57) (Glucose-regulated thiol oxidoreductase 58 kDa protein)
ruditapes2_c2336	glycerol ether metabolic process	other metabolic processes	P	Protein disulfide-isomerase A3 (EC 5.3.4.1) (Endoplasmic reticulum resident protein 57) (ER protein 57) (ERp57) (Glucose-regulated thiol oxidoreductase 58 kDa protein)
ruditapes_c16218	cell cycle	cell cycle and proliferation	P	Cyclin-dependent kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 8) (Mediator complex subunit cdk8) (Mediator of RNA polymerase II transcription subunit cdk8)
ruditapes_c16218	protein amino acid phosphorylation	protein metabolism	P	Cyclin-dependent kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 8) (Mediator complex subunit cdk8) (Mediator of RNA polymerase II transcription subunit cdk8)
ruditapes_c16218	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclin-dependent kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 8) (Mediator complex subunit cdk8) (Mediator of RNA polymerase II transcription subunit cdk8)
ruditapes_c16218	"transcription, DNA-dependent"	RNA metabolism	P	Cyclin-dependent kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 8) (Mediator complex subunit cdk8) (Mediator of RNA polymerase II transcription subunit cdk8)
ruditapes_c16218	phosphorylation	other metabolic processes	P	Cyclin-dependent kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 8) (Mediator complex subunit cdk8) (Mediator of RNA polymerase II transcription subunit cdk8)
ruditapes_lrc33823	glycolysis	other metabolic processes	P	Fructose-bisphosphate aldolase C-B (EC 4.1.2.13) (Brain-type aldolase-B)
ruditapes_lrc37902	glycolysis	other metabolic processes	P	Fructose-bisphosphate aldolase C-B (EC 4.1.2.13) (Brain-type aldolase-B)
ruditapes_c28128	glycolysis	other metabolic processes	P	Fructose-bisphosphate aldolase B (EC 4.1.2.13) (Liver-type aldolase)
ruditapes_lrc36009	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c31594	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_lrc36009	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_lrc36009	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c8366	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c580	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c580	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_lrc32128	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_lrc32128	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c31594	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_lrc36009	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c580	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c8366	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c580	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_lrc36009	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c8366	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c31594	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c580	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c8366	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_lrc32128	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c8366	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_lrc32128	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c8366	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_lrc36009	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_lrc32128	protein autoubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c31594	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c31594	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_lrc32128	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c31594	multicellular organismal development	developmental processes	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes_c580	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7-A (EC 6.3.2.-) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (XIAP homolog XLX) (XLX)
ruditapes2_c280	proteolysis	protein metabolism	P	Tolloid-like protein 1 (EC 3.4.24.-) (Metalloprotease xolloid-like) (Xenopus tolloid-like protein 1) (Xlr)
ruditapes_s38279	proteolysis	protein metabolism	P	Tolloid-like protein 1 (EC 3.4.24.-) (Metalloprotease xolloid-like) (Xenopus tolloid-like protein 1) (Xlr)
ruditapes2_c280	cell differentiation	other biological processes	P	Tolloid-like protein 1 (EC 3.4.24.-) (Metalloprotease xolloid-like) (Xenopus tolloid-like protein 1) (Xlr)
ruditapes_s38279	multicellular organismal development	developmental processes	P	Tolloid-like protein 1 (EC 3.4.24.-) (Metalloprotease xolloid-like) (Xenopus tolloid-like protein 1) (Xlr)
ruditapes_s38279	cell differentiation	other biological processes	P	Tolloid-like protein 1 (EC 3.4.24.-) (Metalloprotease xolloid-like) (Xenopus tolloid-like protein 1) (Xlr)
ruditapes2_c280	multicellular organismal development	developmental processes	P	Tolloid-like protein 1 (EC 3.4.24.-) (Metalloprotease xolloid-like) (Xenopus tolloid-like protein 1) (Xlr)
ruditapes_c12188	mRNA processing	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c12188	methylation	other metabolic processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c12188	mRNA capping	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c12188	"transcription, DNA-dependent"	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c12188	metabolic process	other metabolic processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c12188	mRNA methylation	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c12188	viral genome replication	other biological processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c12188	proteolysis	protein metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c12188	RNA biosynthetic process	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c12188	RNA processing	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c4924	RNA-dependent DNA replication	DNA metabolism	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c4924	evasion by virus of host immune response	stress response	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c4924	metabolic process	other metabolic processes	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c4924	interspecies interaction between organisms	other biological processes	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c4924	DNA replication	DNA metabolism	P	Protein P [Includes: DNA-directed DNA polymerase (EC 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
ruditapes_c21516	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c13992	metabolic process	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c13992	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c21516	mRNA capping	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c21516	metabolic process	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c13992	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c13992	mRNA processing	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c21516	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c21516	methylation	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c13992	mRNA capping	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c13992	methylation	other metabolic processes	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c21516	mRNA processing	RNA metabolism	P	RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
ruditapes_c15840	carbohydrate metabolic process	other metabolic processes	P	Neuraminidase (EC 3.2.1.18)
ruditapes_c15840	metabolic process	other metabolic processes	P	Neuraminidase (EC 3.2.1.18)
ruditapes_c15254	regulation of small GTPase mediated signal transduction	signal transduction	P	Ras-GEF domain-containing family member 1B (GPI gamma-4)
ruditapes_c15254	small GTPase mediated signal transduction	signal transduction	P	Ras-GEF domain-containing family member 1B (GPI gamma-4)
ruditapes_c14094	Notch signaling pathway	signal transduction	P	Delta and Notch-like epidermal growth factor-related receptor (Brain EGF repeat-containing transmembrane protein)
ruditapes_c14094	central nervous system development	developmental processes	P	Delta and Notch-like epidermal growth factor-related receptor (Brain EGF repeat-containing transmembrane protein)
ruditapes_c14094	skeletal muscle fiber development	developmental processes	P	Delta and Notch-like epidermal growth factor-related receptor (Brain EGF repeat-containing transmembrane protein)
ruditapes_c14094	multicellular organismal development	developmental processes	P	Delta and Notch-like epidermal growth factor-related receptor (Brain EGF repeat-containing transmembrane protein)
ruditapes_c14094	Notch receptor processing	signal transduction	P	Delta and Notch-like epidermal growth factor-related receptor (Brain EGF repeat-containing transmembrane protein)
ruditapes_c14094	Notch receptor processing	protein metabolism	P	Delta and Notch-like epidermal growth factor-related receptor (Brain EGF repeat-containing transmembrane protein)
ruditapes_c14094	cell differentiation	other biological processes	P	Delta and Notch-like epidermal growth factor-related receptor (Brain EGF repeat-containing transmembrane protein)
ruditapes_c14094	glial cell differentiation	developmental processes	P	Delta and Notch-like epidermal growth factor-related receptor (Brain EGF repeat-containing transmembrane protein)
ruditapes_c26109	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (Eukaryotic translation initiation factor 3 subunit 9) (eIF-3-eta) (eIF3 p116)
ruditapes_c26109	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (Eukaryotic translation initiation factor 3 subunit 9) (eIF-3-eta) (eIF3 p116)
ruditapes_c8517	ion transport	transport	P	Electroneutral sodium bicarbonate exchanger 1 (Electroneutral Na+-driven Cl-HCO3 exchanger) (Solute carrier family 4 member 8) (k-NBC3)
ruditapes_c8517	sodium ion transport	transport	P	Electroneutral sodium bicarbonate exchanger 1 (Electroneutral Na+-driven Cl-HCO3 exchanger) (Solute carrier family 4 member 8) (k-NBC3)
ruditapes_c8517	transport	transport	P	Electroneutral sodium bicarbonate exchanger 1 (Electroneutral Na+-driven Cl-HCO3 exchanger) (Solute carrier family 4 member 8) (k-NBC3)
ruditapes_c8517	anion transport	transport	P	Electroneutral sodium bicarbonate exchanger 1 (Electroneutral Na+-driven Cl-HCO3 exchanger) (Solute carrier family 4 member 8) (k-NBC3)
ruditapes_c29273	neuropeptide signaling pathway	signal transduction	P	Latrophilin-2 (Calcium-independent alpha-latrotoxin receptor 2) (CIRL-2) (Fragment)
ruditapes_c29273	signal transduction	signal transduction	P	Latrophilin-2 (Calcium-independent alpha-latrotoxin receptor 2) (CIRL-2) (Fragment)
ruditapes_c29273	cell surface receptor linked signal transduction	signal transduction	P	Latrophilin-2 (Calcium-independent alpha-latrotoxin receptor 2) (CIRL-2) (Fragment)
ruditapes_c29273	G-protein coupled receptor protein signaling pathway	signal transduction	P	Latrophilin-2 (Calcium-independent alpha-latrotoxin receptor 2) (CIRL-2) (Fragment)
ruditapes_c19107	thyroid hormone transport	transport	P	Solute carrier organic anion transporter family member 4A1 (Organic anion-transporting polypeptide E) (OATP-E) (Sodium-independent organic anion transporter E) (Solute carrier family 21 member 12)
ruditapes_c19107	transport	transport	P	Solute carrier organic anion transporter family member 4A1 (Organic anion-transporting polypeptide E) (OATP-E) (Sodium-independent organic anion transporter E) (Solute carrier family 21 member 12)
ruditapes_c19107	ion transport	transport	P	Solute carrier organic anion transporter family member 4A1 (Organic anion-transporting polypeptide E) (OATP-E) (Sodium-independent organic anion transporter E) (Solute carrier family 21 member 12)
ruditapes_c19107	thyroid hormone metabolic process	other metabolic processes	P	Solute carrier organic anion transporter family member 4A1 (Organic anion-transporting polypeptide E) (OATP-E) (Sodium-independent organic anion transporter E) (Solute carrier family 21 member 12)
ruditapes_lrc36181	biological_process	other biological processes	P	Leucine-rich repeat-containing protein 66
ruditapes_s37118	oxidation reduction	other metabolic processes	P	Lanosterol 14-alpha demethylase (LDM) (EC 1.14.13.70) (CYPLI) (Cytochrome P450 51A1) (Cytochrome P450-14DM) (Cytochrome P45014DM) (Cytochrome P450LI) (Sterol 14-alpha demethylase)
ruditapes_s37118	cholesterol biosynthetic process	other metabolic processes	P	Lanosterol 14-alpha demethylase (LDM) (EC 1.14.13.70) (CYPLI) (Cytochrome P450 51A1) (Cytochrome P450-14DM) (Cytochrome P45014DM) (Cytochrome P450LI) (Sterol 14-alpha demethylase)
ruditapes_s37118	sterol biosynthetic process	other metabolic processes	P	Lanosterol 14-alpha demethylase (LDM) (EC 1.14.13.70) (CYPLI) (Cytochrome P450 51A1) (Cytochrome P450-14DM) (Cytochrome P45014DM) (Cytochrome P450LI) (Sterol 14-alpha demethylase)
ruditapes_s37118	steroid biosynthetic process	other metabolic processes	P	Lanosterol 14-alpha demethylase (LDM) (EC 1.14.13.70) (CYPLI) (Cytochrome P450 51A1) (Cytochrome P450-14DM) (Cytochrome P45014DM) (Cytochrome P450LI) (Sterol 14-alpha demethylase)
ruditapes_s37118	lipid biosynthetic process	other metabolic processes	P	Lanosterol 14-alpha demethylase (LDM) (EC 1.14.13.70) (CYPLI) (Cytochrome P450 51A1) (Cytochrome P450-14DM) (Cytochrome P45014DM) (Cytochrome P450LI) (Sterol 14-alpha demethylase)
ruditapes_c28514	transmembrane transport	transport	P	Sodium/myo-inositol cotransporter 2 (Na(+)/myo-inositol cotransporter 2) (Sodium-dependent glucose cotransporter) (Sodium/glucose cotransporter KST1) (Sodium/myo-inositol transporter 2) (SMIT2) (Solute carrier family 5 member 11)
ruditapes_c28514	apoptosis	death	P	Sodium/myo-inositol cotransporter 2 (Na(+)/myo-inositol cotransporter 2) (Sodium-dependent glucose cotransporter) (Sodium/glucose cotransporter KST1) (Sodium/myo-inositol transporter 2) (SMIT2) (Solute carrier family 5 member 11)
ruditapes_c28514	sodium ion transport	transport	P	Sodium/myo-inositol cotransporter 2 (Na(+)/myo-inositol cotransporter 2) (Sodium-dependent glucose cotransporter) (Sodium/glucose cotransporter KST1) (Sodium/myo-inositol transporter 2) (SMIT2) (Solute carrier family 5 member 11)
ruditapes_c28514	transport	transport	P	Sodium/myo-inositol cotransporter 2 (Na(+)/myo-inositol cotransporter 2) (Sodium-dependent glucose cotransporter) (Sodium/glucose cotransporter KST1) (Sodium/myo-inositol transporter 2) (SMIT2) (Solute carrier family 5 member 11)
ruditapes_c28514	carbohydrate transport	transport	P	Sodium/myo-inositol cotransporter 2 (Na(+)/myo-inositol cotransporter 2) (Sodium-dependent glucose cotransporter) (Sodium/glucose cotransporter KST1) (Sodium/myo-inositol transporter 2) (SMIT2) (Solute carrier family 5 member 11)
ruditapes_c28514	ion transport	transport	P	Sodium/myo-inositol cotransporter 2 (Na(+)/myo-inositol cotransporter 2) (Sodium-dependent glucose cotransporter) (Sodium/glucose cotransporter KST1) (Sodium/myo-inositol transporter 2) (SMIT2) (Solute carrier family 5 member 11)
ruditapes_s36564	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s36564	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s36564	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s36564	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s36564	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s36564	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s36564	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s36564	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s36564	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s36564	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s36564	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33476	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s36564	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	cellular protein complex assembly	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc38429	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5606	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35857	regulation of gene expression	other metabolic processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c5732	embryonic development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes2_lrc5663	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s40252	hepatocyte differentiation	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_s38611	apoptosis	death	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc33975	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	liver development	developmental processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc36261	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_lrc35922	regulation of DNA binding	other biological processes	P	Transcription initiation factor TFIID subunit 10 (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (mTAFII30)
ruditapes_c16336	biological_process	other biological processes	P	Heat shock 70 kDa protein 12A
ruditapes_c12915	biological_process	other biological processes	P	Heat shock 70 kDa protein 12A
ruditapes_c10462	biological_process	other biological processes	P	Heat shock 70 kDa protein 12A
ruditapes_c19232	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3)
ruditapes_c19232	biological_process	other biological processes	P	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3)
ruditapes_c19232	"transcription, DNA-dependent"	RNA metabolism	P	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3)
ruditapes_c8553	biological_process	other biological processes	P	Uncharacterized protein C9orf142 homolog
ruditapes_c1431	carbohydrate metabolic process	other metabolic processes	P	Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)
ruditapes_c12106	hexose metabolic process	other metabolic processes	P	Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)
ruditapes_c1431	hexose metabolic process	other metabolic processes	P	Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)
ruditapes_c14942	hexose metabolic process	other metabolic processes	P	Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)
ruditapes_c14942	carbohydrate metabolic process	other metabolic processes	P	Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)
ruditapes_c12106	carbohydrate metabolic process	other metabolic processes	P	Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)
ruditapes_c23863	pyridoxal 5'-phosphate salvage	other metabolic processes	P	Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)
ruditapes_c23863	phosphorylation	other metabolic processes	P	Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)
ruditapes_c23863	pyridoxal phosphate biosynthetic process	other metabolic processes	P	Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)
ruditapes_c23863	cell proliferation	cell cycle and proliferation	P	Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)
ruditapes_c15089	biological_process	other biological processes	P	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)
ruditapes_s38570	biological_process	other biological processes	P	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)
ruditapes_s38570	transmembrane transport	transport	P	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)
ruditapes_c30034	transport	transport	P	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)
ruditapes_c15089	transmembrane transport	transport	P	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)
ruditapes_c30034	transmembrane transport	transport	P	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)
ruditapes_s38570	transport	transport	P	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)
ruditapes_c15089	transport	transport	P	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)
ruditapes_c30034	biological_process	other biological processes	P	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)
ruditapes_s36026	nervous system development	developmental processes	P	Protein FAM5B (BMP/retinoic acid-inducible neural-specific protein 2)
ruditapes_s36026	negative regulation of cell cycle	cell cycle and proliferation	P	Protein FAM5B (BMP/retinoic acid-inducible neural-specific protein 2)
ruditapes_c8465	"transcription, DNA-dependent"	RNA metabolism	P	General transcription factor 3C polypeptide 1 (TF3C-alpha) (TFIIIC box B-binding subunit) (Transcription factor IIIC 220 kDa subunit) (TFIIIC 220 kDa subunit) (TFIIIC220) (Transcription factor IIIC subunit alpha)
ruditapes_c20086	biological_process	other biological processes	P	FCH domain only protein 1
ruditapes_c4980	biological_process	other biological processes	P	Lipase member M (EC 3.1.1.-) (Lipase-like abhydrolase domain-containing protein 3)
ruditapes_c4980	lipid catabolic process	other metabolic processes	P	Lipase member M (EC 3.1.1.-) (Lipase-like abhydrolase domain-containing protein 3)
ruditapes_c4980	lipid metabolic process	other metabolic processes	P	Lipase member M (EC 3.1.1.-) (Lipase-like abhydrolase domain-containing protein 3)
ruditapes_c24972	fat cell differentiation	other biological processes	P	Bardet-Biedl syndrome 7 protein homolog (BBS2-like protein 1)
ruditapes_c24972	biological_process	other biological processes	P	Bardet-Biedl syndrome 7 protein homolog (BBS2-like protein 1)
ruditapes_s37092	biological_process	other biological processes	P	RELT-like protein 1
ruditapes_c22839	cation transport	transport	P	Probable phospholipid-transporting ATPase VD (EC 3.6.3.1) (ATPase class V type 10D)
ruditapes_c22839	phospholipid transport	transport	P	Probable phospholipid-transporting ATPase VD (EC 3.6.3.1) (ATPase class V type 10D)
ruditapes_c1850	rRNA transcription	RNA metabolism	P	Ribonuclease kappa (RNase K) (RNase kappa) (EC 3.1.-.-)
ruditapes_c1727	rRNA transcription	RNA metabolism	P	Ribonuclease kappa (RNase K) (RNase kappa) (EC 3.1.-.-)
ruditapes_c21347	response to stimulus	other biological processes	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes_c4131	response to stimulus	other biological processes	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes_c21347	visual perception	other biological processes	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes_c4131	visual perception	other biological processes	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes_c4131	sensory perception of sound	other biological processes	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes_c4131	phosphorylation	other metabolic processes	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes_c21347	sensory perception of sound	other biological processes	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes_c4131	protein amino acid autophosphorylation	protein metabolism	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes_c21347	phosphorylation	other metabolic processes	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes_c21347	protein amino acid phosphorylation	protein metabolism	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes_c4131	protein amino acid phosphorylation	protein metabolism	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes_c21347	protein amino acid autophosphorylation	protein metabolism	P	Myosin-IIIa (EC 2.7.11.1)
ruditapes2_c2109	response to oxidative stress	stress response	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes2_c2109	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes2_c2109	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes2_c2109	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes2_c2109	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit)"
ruditapes_c20685	negative regulation of proteolysis	protein metabolism	P	Serpin B10 (TGF-beta-repressible serine proteinase inhibitor) (Trespin) (Transforming growth factor beta repressible serpin)
ruditapes_c20685	negative regulation of endopeptidase activity	other biological processes	P	Serpin B10 (TGF-beta-repressible serine proteinase inhibitor) (Trespin) (Transforming growth factor beta repressible serpin)
ruditapes_c20685	negative regulation of peptidase activity	other biological processes	P	Serpin B10 (TGF-beta-repressible serine proteinase inhibitor) (Trespin) (Transforming growth factor beta repressible serpin)
ruditapes_c13006	lipid metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c22733	acrosome reaction	other biological processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c22733	lipid metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c22733	signal transduction	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c22733	phosphatidylinositol metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c26424	signal transduction	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c13006	acrosome reaction	other biological processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c22733	lipid catabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c26424	lipid metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c13006	lipid catabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c26424	acrosome reaction	other biological processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c13006	phosphatidylinositol metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c26424	lipid catabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c13006	signal transduction	signal transduction	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes_c26424	phosphatidylinositol metabolic process	other metabolic processes	P	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-4) (Phospholipase C-delta-4) (PLC-delta-4)"
ruditapes2_c219	activation of NF-kappaB-inducing kinase activity	signal transduction	P	Tumor necrosis factor ligand superfamily member 15 (TNF ligand-related molecule 1) (Vascular endothelial cell growth inhibitor)
ruditapes2_c219	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	Tumor necrosis factor ligand superfamily member 15 (TNF ligand-related molecule 1) (Vascular endothelial cell growth inhibitor)
ruditapes2_c219	positive regulation of cytokine secretion	transport	P	Tumor necrosis factor ligand superfamily member 15 (TNF ligand-related molecule 1) (Vascular endothelial cell growth inhibitor)
ruditapes2_c219	immune response	other biological processes	P	Tumor necrosis factor ligand superfamily member 15 (TNF ligand-related molecule 1) (Vascular endothelial cell growth inhibitor)
ruditapes2_c219	cytokine metabolic process	other metabolic processes	P	Tumor necrosis factor ligand superfamily member 15 (TNF ligand-related molecule 1) (Vascular endothelial cell growth inhibitor)
ruditapes2_c219	activation of caspase activity	death	P	Tumor necrosis factor ligand superfamily member 15 (TNF ligand-related molecule 1) (Vascular endothelial cell growth inhibitor)
ruditapes2_c738	biological_process	other biological processes	P	ATP-binding cassette sub-family A member 6
ruditapes2_c738	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 6
ruditapes2_c738	transport	transport	P	ATP-binding cassette sub-family A member 6
ruditapes_lrc24214	transport	transport	P	ATP-binding cassette sub-family A member 9
ruditapes_lrc24214	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 9
ruditapes_lrc24214	biological_process	other biological processes	P	ATP-binding cassette sub-family A member 9
ruditapes_c24780	cell adhesion	cell adhesion	P	EMILIN-2 (Basilin) (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2)
ruditapes_c15722	cell adhesion	cell adhesion	P	EMILIN-2 (Basilin) (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2)
ruditapes_c25058	cell adhesion	cell adhesion	P	EMILIN-2 (Basilin) (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2)
ruditapes_c20555	cell adhesion	cell adhesion	P	EMILIN-2 (Basilin) (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2)
ruditapes_s32258	cell adhesion	cell adhesion	P	EMILIN-2 (Basilin) (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2)
ruditapes_c16784	biological_process	other biological processes	P	Interleukin-17 receptor C (IL-17 receptor C) (IL-17RC) (Interleukin-17 receptor-like protein) (IL-17RL) (ZcytoR14)
ruditapes_lrc32957	phosphorylation	other metabolic processes	P	Pantothenate kinase 1 (mPank) (mPank1) (EC 2.7.1.33) (Pantothenic acid kinase 1)
ruditapes_lrc32957	coenzyme A biosynthetic process	other metabolic processes	P	Pantothenate kinase 1 (mPank) (mPank1) (EC 2.7.1.33) (Pantothenic acid kinase 1)
ruditapes_c13751	biological_process	other biological processes	P	pre-mRNA 3' end processing protein WDR33 (WD repeat-containing protein 33) (WD repeat-containing protein WDC146)
ruditapes_c13751	mRNA processing	RNA metabolism	P	pre-mRNA 3' end processing protein WDR33 (WD repeat-containing protein 33) (WD repeat-containing protein WDC146)
ruditapes_c21165	tRNA processing	RNA metabolism	P	Protein TusC (tRNA 2-thiouridine synthesizing protein C)
ruditapes_c7443	tRNA processing	RNA metabolism	P	Protein TusC (tRNA 2-thiouridine synthesizing protein C)
ruditapes_c15373	translation	protein metabolism	P	50S ribosomal protein L15
ruditapes2_lrc3346	protein transport	transport	P	Peptidyl-prolyl cis-trans isomerase D (PPIase D) (EC 5.2.1.8) (Rotamase D)
ruditapes2_lrc3346	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase D (PPIase D) (EC 5.2.1.8) (Rotamase D)
ruditapes2_lrc3346	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase D (PPIase D) (EC 5.2.1.8) (Rotamase D)
ruditapes_c1678	ribosome biogenesis	other biological processes	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_c1678	rRNA processing	RNA metabolism	P	Endoribonuclease YbeY (EC 3.1.-.-)
ruditapes_lrc33521	isoprenoid biosynthetic process	other metabolic processes	P	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT)
ruditapes2_c1276	glycolysis	other metabolic processes	P	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
ruditapes_c1234	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c1234	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c520	cell division	other biological processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c1234	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c1234	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c1234	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c520	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c520	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c520	cell cycle	cell cycle and proliferation	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c520	UDP-N-acetylgalactosamine biosynthetic process	other metabolic processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes2_c520	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c1234	cell division	other biological processes	P	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
ruditapes_c28984	"transcription, DNA-dependent"	RNA metabolism	P	Transcription termination/antitermination protein NusA
ruditapes_c28984	transcription antitermination	protein metabolism	P	Transcription termination/antitermination protein NusA
ruditapes_c28984	regulation of transcription termination	RNA metabolism	P	Transcription termination/antitermination protein NusA
ruditapes_c28984	regulation of transcription termination	cell organization and biogenesis	P	Transcription termination/antitermination protein NusA
ruditapes_c28984	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription termination/antitermination protein NusA
ruditapes_c28984	transcription antitermination	RNA metabolism	P	Transcription termination/antitermination protein NusA
ruditapes_c28984	transcription antitermination	cell organization and biogenesis	P	Transcription termination/antitermination protein NusA
ruditapes_c28984	transcription termination	RNA metabolism	P	Transcription termination/antitermination protein NusA
ruditapes_c28984	transcription termination	cell organization and biogenesis	P	Transcription termination/antitermination protein NusA
ruditapes_c28984	regulation of transcription termination	protein metabolism	P	Transcription termination/antitermination protein NusA
ruditapes_c31424	RNA processing	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes_c31424	mRNA catabolic process	RNA metabolism	P	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase)
ruditapes_c12143	ciliary or flagellar motility	other biological processes	P	Flagellar basal-body rod protein FlgF
ruditapes2_c320	ion transport	transport	P	OmpA-like protein
ruditapes2_c320	transport	transport	P	OmpA-like protein
ruditapes_c20150	carbohydrate metabolic process	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_c20150	oxidation reduction	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_c20150	glucose metabolic process	other metabolic processes	P	Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
ruditapes_c22345	RNA metabolic process	RNA metabolism	P	Exoribonuclease 2 (EC 3.1.13.1) (Exoribonuclease II) (RNase II) (Ribonuclease II)
ruditapes_c22345	RNA catabolic process	RNA metabolism	P	Exoribonuclease 2 (EC 3.1.13.1) (Exoribonuclease II) (RNase II) (Ribonuclease II)
ruditapes_c22488	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c22488	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c8573	RNA processing	RNA metabolism	P	Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)
ruditapes_c8573	rRNA catabolic process	RNA metabolism	P	Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)
ruditapes_c13397	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit G (EC 1.6.99.5) (NADH dehydrogenase I subunit G) (NDH-1 subunit G)
ruditapes_c13397	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-quinone oxidoreductase subunit G (EC 1.6.99.5) (NADH dehydrogenase I subunit G) (NDH-1 subunit G)
ruditapes2_lrc3468	cellular amino acid biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_lrc3468	arginine biosynthetic process	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes2_lrc3468	arginine biosynthetic process via ornithine	other metabolic processes	P	Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)
ruditapes_c23227	metabolic process	other metabolic processes	P	Uncharacterized protein BUsg
ruditapes_c30209	cell morphogenesis	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c30209	lipopolysaccharide biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c30209	peptidoglycan biosynthetic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c30209	regulation of cell shape	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c30209	cell wall organization	cell organization and biogenesis	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c30209	metabolic process	other metabolic processes	P	Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)]
ruditapes_c33914	transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c33914	ATP synthesis coupled proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c33914	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c33914	proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c33914	ATP biosynthetic process	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c33914	ion transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c7976	proteolysis	protein metabolism	P	Lipoprotein signal peptidase (EC 3.4.23.36) (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)
ruditapes_c31860	aromatic amino acid family biosynthetic process	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c31860	cellular amino acid biosynthetic process	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c31860	oxidation reduction	other metabolic processes	P	Shikimate dehydrogenase (EC 1.1.1.25)
ruditapes_c20486	isoprenoid biosynthetic process	other metabolic processes	P	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT)
ruditapes_c23057	response to stress	stress response	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c23057	protein folding	protein metabolism	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c17792	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative nickel-responsive regulator
ruditapes_c17792	"transcription, DNA-dependent"	RNA metabolism	P	Putative nickel-responsive regulator
ruditapes_c11525	proteolysis	protein metabolism	P	Cyanophycinase (EC 3.4.15.6) (Extracellular CGPase) (CPHEpa) (Extracellular cyanophycinase)
ruditapes_c11525	cellular macromolecule metabolic process	other metabolic processes	P	Cyanophycinase (EC 3.4.15.6) (Extracellular CGPase) (CPHEpa) (Extracellular cyanophycinase)
ruditapes2_c869	aromatic compound catabolic process	other metabolic processes	P	"2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (HOPDA hydrolase) (EC 3.7.1.8) (2,6-dioxo-6-phenylhexa-3-enoate hydrolase)"
ruditapes_s37950	intracellular protein transport	transport	P	Preprotein translocase subunit SecE
ruditapes_s37950	protein transport	transport	P	Preprotein translocase subunit SecE
ruditapes_s37950	protein targeting	transport	P	Preprotein translocase subunit SecE
ruditapes_s37950	transport	transport	P	Preprotein translocase subunit SecE
ruditapes_s37950	protein secretion	transport	P	Preprotein translocase subunit SecE
ruditapes_lrc12899	methylation	other metabolic processes	P	Demethylrebeccamycin-D-glucose O-methyltransferase (EC 2.1.1.164) (Rebeccamycin O-methyltransferase) (Rebeccamycin sugar 4'-O-methyltransferase RebM)
ruditapes_lrc12899	metabolic process	other metabolic processes	P	Demethylrebeccamycin-D-glucose O-methyltransferase (EC 2.1.1.164) (Rebeccamycin O-methyltransferase) (Rebeccamycin sugar 4'-O-methyltransferase RebM)
ruditapes_lrc16443	carbohydrate metabolic process	other metabolic processes	P	"Alpha,alpha-trehalose phosphorylase (TPase) (EC 2.4.1.64)"
ruditapes_c8984	"transcription, DNA-dependent"	RNA metabolism	P	B3 domain-containing transcription factor VRN1 (Protein VERNALIZATION 1)
ruditapes_c8984	regulation of flower development	developmental processes	P	B3 domain-containing transcription factor VRN1 (Protein VERNALIZATION 1)
ruditapes_c8984	"regulation of transcription, DNA-dependent"	RNA metabolism	P	B3 domain-containing transcription factor VRN1 (Protein VERNALIZATION 1)
ruditapes_c8984	vernalization response	stress response	P	B3 domain-containing transcription factor VRN1 (Protein VERNALIZATION 1)
ruditapes_c14562	metabolic process	other metabolic processes	P	Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 4)
ruditapes_c14562	phospholipid biosynthetic process	other metabolic processes	P	Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 4)
ruditapes_c6173	embryonic development ending in seed dormancy	developmental processes	P	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.4.19.12) (Deubiquitinating enzyme 14) (AtUBP14) (TITAN-6 protein) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14)
ruditapes_c6173	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.4.19.12) (Deubiquitinating enzyme 14) (AtUBP14) (TITAN-6 protein) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14)
ruditapes_c6173	protein deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.4.19.12) (Deubiquitinating enzyme 14) (AtUBP14) (TITAN-6 protein) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14)
ruditapes_c6173	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.4.19.12) (Deubiquitinating enzyme 14) (AtUBP14) (TITAN-6 protein) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14)
ruditapes_c6173	root hair elongation	developmental processes	P	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.4.19.12) (Deubiquitinating enzyme 14) (AtUBP14) (TITAN-6 protein) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14)
ruditapes_c13163	phosphorylation	other metabolic processes	P	Cysteine-rich receptor-like protein kinase 17 (Cysteine-rich RLK17) (EC 2.7.11.-) (Protein EMBRYO DEFECTIVE 1290)
ruditapes_c13163	protein amino acid phosphorylation	protein metabolism	P	Cysteine-rich receptor-like protein kinase 17 (Cysteine-rich RLK17) (EC 2.7.11.-) (Protein EMBRYO DEFECTIVE 1290)
ruditapes_c6548	syncytium formation	other biological processes	P	Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol oxygenase 1) (AtMIOX1) (MI oxygenase 1)
ruditapes_c6548	L-ascorbic acid biosynthetic process	other metabolic processes	P	Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol oxygenase 1) (AtMIOX1) (MI oxygenase 1)
ruditapes_c6548	oxidation reduction	other metabolic processes	P	Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol oxygenase 1) (AtMIOX1) (MI oxygenase 1)
ruditapes_c6548	inositol catabolic process	other metabolic processes	P	Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol oxygenase 1) (AtMIOX1) (MI oxygenase 1)
ruditapes_lrc7546	protein amino acid glycosylation	protein metabolism	P	"Beta-1,3-galactosyltransferase 15 (EC 2.4.1.-) (Galactosyltransferase 1)"
ruditapes_lrc7546	Lewis a epitope biosynthetic process	other metabolic processes	P	"Beta-1,3-galactosyltransferase 15 (EC 2.4.1.-) (Galactosyltransferase 1)"
ruditapes_lrc15175	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase 19 (EC 3.2.1.4) (Endo-1,4-beta glucanase 19)"
ruditapes_lrc15175	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase 19 (EC 3.2.1.4) (Endo-1,4-beta glucanase 19)"
ruditapes_lrc15175	metabolic process	other metabolic processes	P	"Endoglucanase 19 (EC 3.2.1.4) (Endo-1,4-beta glucanase 19)"
ruditapes_c17324	metabolic process	other metabolic processes	P	"Endoglucanase 19 (EC 3.2.1.4) (Endo-1,4-beta glucanase 19)"
ruditapes_lrc15175	cell wall organization	cell organization and biogenesis	P	"Endoglucanase 19 (EC 3.2.1.4) (Endo-1,4-beta glucanase 19)"
ruditapes_c17324	cell wall organization	cell organization and biogenesis	P	"Endoglucanase 19 (EC 3.2.1.4) (Endo-1,4-beta glucanase 19)"
ruditapes_lrc15175	cellulose catabolic process	other metabolic processes	P	"Endoglucanase 19 (EC 3.2.1.4) (Endo-1,4-beta glucanase 19)"
ruditapes_c17324	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase 19 (EC 3.2.1.4) (Endo-1,4-beta glucanase 19)"
ruditapes_c17324	cellulose catabolic process	other metabolic processes	P	"Endoglucanase 19 (EC 3.2.1.4) (Endo-1,4-beta glucanase 19)"
ruditapes_c17324	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase 19 (EC 3.2.1.4) (Endo-1,4-beta glucanase 19)"
ruditapes_c8579	biological_process	other biological processes	P	Zinc finger CCCH domain-containing protein 57 (AtC3H57) (Zinc finger type domain-containing protein ZFN3)
ruditapes_c14499	response to wounding	stress response	P	Nudix hydrolase 8 (AtNUDT8) (EC 3.6.1.-)
ruditapes_c8623	proteolysis	protein metabolism	P	Nudix hydrolase 3 (AtNUDT3) (EC 3.6.1.-)
ruditapes_c19615	protein transport	transport	P	Conserved oligomeric Golgi complex subunit 4 (COG complex subunit 4) (Component of oligomeric Golgi complex 4)
ruditapes_c19615	transport	transport	P	Conserved oligomeric Golgi complex subunit 4 (COG complex subunit 4) (Component of oligomeric Golgi complex 4)
ruditapes_c18863	response to DNA damage stimulus	stress response	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	DNA repair	stress response	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	DNA repair	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	double-strand break repair via homologous recombination	stress response	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	double-strand break repair via homologous recombination	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	response to DNA damage stimulus	stress response	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_c18863	chromosome organization	cell organization and biogenesis	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_c18863	cellular metabolic process	other metabolic processes	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_c18863	cellular response to cold	stress response	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	chromosome organization	cell organization and biogenesis	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	DNA replication	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	cellular response to cold	stress response	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	telomere maintenance	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	telomere maintenance	cell organization and biogenesis	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_c18863	double-strand break repair via homologous recombination	stress response	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_c18863	double-strand break repair via homologous recombination	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	cellular metabolic process	other metabolic processes	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc32838	DNA recombination	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_c18863	DNA replication	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_c18863	DNA recombination	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_c18863	telomere maintenance	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_c18863	telomere maintenance	cell organization and biogenesis	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_c18863	DNA repair	stress response	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_c18863	DNA repair	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4A (EC 3.6.4.12) (RecQ-like protein 4A) (AtRecQ4A) (AtRecQl4A) (SGS1-like protein) (AtSGS1)
ruditapes_lrc24956	"transcription, DNA-dependent"	RNA metabolism	P	Protein BASIC PENTACYSTEINE6 (AtBPC6) (GAGA-binding transcriptional activator BBR/BPC6)
ruditapes_lrc24956	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein BASIC PENTACYSTEINE6 (AtBPC6) (GAGA-binding transcriptional activator BBR/BPC6)
ruditapes2_c174	response to stress	stress response	P	Universal stress protein A-like protein
ruditapes_c3215	response to stress	stress response	P	Universal stress protein A-like protein
ruditapes_c15795	cell wall organization	cell organization and biogenesis	P	Probable xyloglucan glycosyltransferase 1 (EC 2.4.1.-) (Cellulose synthase-like protein C1) (OsCslC1)
ruditapes_c18332	RNA-dependent DNA replication	DNA metabolism	P	Telomerase reverse transcriptase (EC 2.7.7.49) (OsTERT)
ruditapes_c22302	multicellular organismal development	developmental processes	P	AP2-like ethylene-responsive transcription factor BBM2 (BnBBM2) (Protein BABY BOOM 2)
ruditapes_c22302	"regulation of transcription, DNA-dependent"	RNA metabolism	P	AP2-like ethylene-responsive transcription factor BBM2 (BnBBM2) (Protein BABY BOOM 2)
ruditapes_c22302	"transcription, DNA-dependent"	RNA metabolism	P	AP2-like ethylene-responsive transcription factor BBM2 (BnBBM2) (Protein BABY BOOM 2)
ruditapes2_c7035	metabolic process	other metabolic processes	P	Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1)
ruditapes2_c7035	oxidation reduction	other metabolic processes	P	Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1)
ruditapes2_c7035	glycolysis	other metabolic processes	P	Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1)
ruditapes_c27623	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta)
ruditapes_c1683	endocytosis	transport	P	CD209 antigen-like protein 2 (CD antigen CD209)
ruditapes_c1683	endocytosis	cell organization and biogenesis	P	CD209 antigen-like protein 2 (CD antigen CD209)
ruditapes_c1683	innate immune response	stress response	P	CD209 antigen-like protein 2 (CD antigen CD209)
ruditapes_c23663	cell projection organization	cell organization and biogenesis	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c15177	photoreceptor cell maintenance	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c23663	retinal cone cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c15177	retinal rod cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c15177	photoreceptor cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c15177	retina morphogenesis in camera-type eye	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c23663	photoreceptor cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c15177	retinal cone cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c15177	cell projection organization	cell organization and biogenesis	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c23663	retinal rod cell development	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c23663	retina morphogenesis in camera-type eye	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c23663	visual perception	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c23663	response to stimulus	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c23663	photoreceptor cell maintenance	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c23663	retina development in camera-type eye	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c15177	response to stimulus	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c15177	visual perception	other biological processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c15177	retina development in camera-type eye	developmental processes	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c15177	axoneme assembly	cell organization and biogenesis	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c23663	axoneme assembly	cell organization and biogenesis	P	Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
ruditapes_c14950	oxidation reduction	other metabolic processes	P	Lysyl oxidase homolog 4 (EC 1.4.3.-) (Lysyl oxidase-like protein 4)
ruditapes_lrc35247	oxidation reduction	other metabolic processes	P	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase (CMP-N-acetylneuraminic acid hydroxylase) (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase) (CMP-Neu5Ac hydroxylase) (CMP-NeuAc hydroxylase) (Fragment)
ruditapes_lrc35247	electron transport chain	other metabolic processes	P	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase (CMP-N-acetylneuraminic acid hydroxylase) (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase) (CMP-Neu5Ac hydroxylase) (CMP-NeuAc hydroxylase) (Fragment)
ruditapes_lrc35247	transport	transport	P	Cytidine monophosphate-N-acetylneuraminic acid hydroxylase (CMP-N-acetylneuraminic acid hydroxylase) (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase) (CMP-Neu5Ac hydroxylase) (CMP-NeuAc hydroxylase) (Fragment)
ruditapes_c5117	negative regulation of peptidase activity	other biological processes	P	Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
ruditapes_c729	transport	transport	P	Facilitated trehalose transporter Tret1-2 homolog (DmTret1-2)
ruditapes_c729	transmembrane transport	transport	P	Facilitated trehalose transporter Tret1-2 homolog (DmTret1-2)
ruditapes_c729	trehalose transport	transport	P	Facilitated trehalose transporter Tret1-2 homolog (DmTret1-2)
ruditapes_lrc39240	translational elongation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc38240	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc38794	translational elongation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc39240	"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	40S ribosomal protein S8
ruditapes_lrc38794	"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	40S ribosomal protein S8
ruditapes_lrc20842	translational elongation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc20842	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc30517	"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	40S ribosomal protein S8
ruditapes_lrc30517	translational elongation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc30517	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc38240	translational elongation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc20842	"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	40S ribosomal protein S8
ruditapes_lrc39240	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc38794	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc38240	"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	40S ribosomal protein S8
ruditapes_c23259	actin filament capping	protein metabolism	P	Gelsolin-like protein 2 (Actin-modulator) (EWAM-P2)
ruditapes_c23259	actin filament capping	cell organization and biogenesis	P	Gelsolin-like protein 2 (Actin-modulator) (EWAM-P2)
ruditapes2_c810	actin filament capping	protein metabolism	P	Gelsolin-like protein 2 (Actin-modulator) (EWAM-P2)
ruditapes2_c810	actin filament capping	cell organization and biogenesis	P	Gelsolin-like protein 2 (Actin-modulator) (EWAM-P2)
ruditapes2_c802	actin filament capping	protein metabolism	P	Gelsolin-like protein 2 (Actin-modulator) (EWAM-P2)
ruditapes2_c802	actin filament capping	cell organization and biogenesis	P	Gelsolin-like protein 2 (Actin-modulator) (EWAM-P2)
ruditapes2_c841	actin filament capping	protein metabolism	P	Gelsolin-like protein 2 (Actin-modulator) (EWAM-P2)
ruditapes2_c841	actin filament capping	cell organization and biogenesis	P	Gelsolin-like protein 2 (Actin-modulator) (EWAM-P2)
ruditapes_c21059	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor 1 homolog
ruditapes_c21059	biological_process	other biological processes	P	Transcription elongation factor 1 homolog
ruditapes_c21059	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor 1 homolog
ruditapes_c12306	brain development	developmental processes	P	Brain tumor protein
ruditapes_c12306	ganglion mother cell fate determination	other biological processes	P	Brain tumor protein
ruditapes_c12306	regulation of translation	protein metabolism	P	Brain tumor protein
ruditapes_c12306	"phagocytosis, engulfment"	transport	P	Brain tumor protein
ruditapes_c12306	"phagocytosis, engulfment"	cell organization and biogenesis	P	Brain tumor protein
ruditapes_c12306	neuroblast proliferation	cell cycle and proliferation	P	Brain tumor protein
ruditapes_c12306	neuroblast proliferation	developmental processes	P	Brain tumor protein
ruditapes_c12306	neuron differentiation	developmental processes	P	Brain tumor protein
ruditapes_c12306	axon guidance	developmental processes	P	Brain tumor protein
ruditapes_c12306	axon guidance	cell organization and biogenesis	P	Brain tumor protein
ruditapes_c12306	negative regulation of neuroblast proliferation	cell cycle and proliferation	P	Brain tumor protein
ruditapes_c12306	negative regulation of neuroblast proliferation	developmental processes	P	Brain tumor protein
ruditapes_c12306	rRNA transcription	RNA metabolism	P	Brain tumor protein
ruditapes_c12306	negative regulation of cell proliferation	cell cycle and proliferation	P	Brain tumor protein
ruditapes_c12306	asymmetric cell division	other biological processes	P	Brain tumor protein
ruditapes_c12306	asymmetric neuroblast division resulting in ganglion mother cell formation	cell cycle and proliferation	P	Brain tumor protein
ruditapes_c12306	asymmetric neuroblast division resulting in ganglion mother cell formation	developmental processes	P	Brain tumor protein
ruditapes_c12306	segmentation	developmental processes	P	Brain tumor protein
ruditapes_c12306	oogenesis	other biological processes	P	Brain tumor protein
ruditapes_c12306	negative regulation of translation	protein metabolism	P	Brain tumor protein
ruditapes_c12811	histone mRNA 3'-end processing	RNA metabolism	P	Symplekin
ruditapes_c12811	mRNA polyadenylation	RNA metabolism	P	Symplekin
ruditapes_c13689	regulation of cell proliferation	cell cycle and proliferation	P	Ras-related protein Rab-18
ruditapes_c13689	feminization of hermaphroditic germ-line	developmental processes	P	Ras-related protein Rab-18
ruditapes_c13689	embryonic development ending in birth or egg hatching	developmental processes	P	Ras-related protein Rab-18
ruditapes_c13689	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Ras-related protein Rab-18
ruditapes_c13689	reproduction	other biological processes	P	Ras-related protein Rab-18
ruditapes_c13689	regulation of meiosis	cell cycle and proliferation	P	Ras-related protein Rab-18
ruditapes_c13689	protein transport	transport	P	Ras-related protein Rab-18
ruditapes_c13689	transport	transport	P	Ras-related protein Rab-18
ruditapes_c13689	germ cell development	other biological processes	P	Ras-related protein Rab-18
ruditapes_c13689	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-18
ruditapes_c28959	phosphorylation	other metabolic processes	P	Fibroblast growth factor receptor 2 (DjFgfr2) (FGFR-2) (EC 2.7.10.1) (DjPTK1)
ruditapes_c28959	protein amino acid phosphorylation	protein metabolism	P	Fibroblast growth factor receptor 2 (DjFgfr2) (FGFR-2) (EC 2.7.10.1) (DjPTK1)
ruditapes2_c162	innate immune response	stress response	P	"Beta-1,3-glucan-binding protein (GBP)"
ruditapes2_c162	carbohydrate metabolic process	other metabolic processes	P	"Beta-1,3-glucan-binding protein (GBP)"
ruditapes2_c1553	innate immune response	stress response	P	"Beta-1,3-glucan-binding protein (GBP)"
ruditapes2_c1553	carbohydrate metabolic process	other metabolic processes	P	"Beta-1,3-glucan-binding protein (GBP)"
ruditapes_c7923	cell junction assembly	cell organization and biogenesis	P	Cell adhesion molecule 3 (Brain immunoglobulin receptor) (Immunoglobulin superfamily member 4B) (IgSF4B) (Nectin-like protein 1) (NECL-1) (Synaptic cell adhesion molecule 3) (SynCAM3) (TSLC1-like protein 1) (TSLL1)
ruditapes_c7923	heterophilic cell adhesion	cell adhesion	P	Cell adhesion molecule 3 (Brain immunoglobulin receptor) (Immunoglobulin superfamily member 4B) (IgSF4B) (Nectin-like protein 1) (NECL-1) (Synaptic cell adhesion molecule 3) (SynCAM3) (TSLC1-like protein 1) (TSLL1)
ruditapes_c7923	adherens junction organization	cell organization and biogenesis	P	Cell adhesion molecule 3 (Brain immunoglobulin receptor) (Immunoglobulin superfamily member 4B) (IgSF4B) (Nectin-like protein 1) (NECL-1) (Synaptic cell adhesion molecule 3) (SynCAM3) (TSLC1-like protein 1) (TSLL1)
ruditapes_c7923	cell-cell junction organization	cell organization and biogenesis	P	Cell adhesion molecule 3 (Brain immunoglobulin receptor) (Immunoglobulin superfamily member 4B) (IgSF4B) (Nectin-like protein 1) (NECL-1) (Synaptic cell adhesion molecule 3) (SynCAM3) (TSLC1-like protein 1) (TSLL1)
ruditapes_c7923	homophilic cell adhesion	cell adhesion	P	Cell adhesion molecule 3 (Brain immunoglobulin receptor) (Immunoglobulin superfamily member 4B) (IgSF4B) (Nectin-like protein 1) (NECL-1) (Synaptic cell adhesion molecule 3) (SynCAM3) (TSLC1-like protein 1) (TSLL1)
ruditapes_c7923	cell adhesion	cell adhesion	P	Cell adhesion molecule 3 (Brain immunoglobulin receptor) (Immunoglobulin superfamily member 4B) (IgSF4B) (Nectin-like protein 1) (NECL-1) (Synaptic cell adhesion molecule 3) (SynCAM3) (TSLC1-like protein 1) (TSLL1)
ruditapes_c22913	endocytosis	transport	P	C-type lectin domain family 4 member F (C-type lectin superfamily member 13) (C-type lectin 13)
ruditapes_c22913	endocytosis	cell organization and biogenesis	P	C-type lectin domain family 4 member F (C-type lectin superfamily member 13) (C-type lectin 13)
ruditapes_c7765	detection of light stimulus involved in visual perception	other biological processes	P	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase/reductase family 16C member 5)
ruditapes_c7765	retinol metabolic process	other metabolic processes	P	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase/reductase family 16C member 5)
ruditapes_c7765	keratinocyte proliferation	cell cycle and proliferation	P	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase/reductase family 16C member 5)
ruditapes_c7765	oxidation reduction	other metabolic processes	P	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase/reductase family 16C member 5)
ruditapes_c7765	metabolic process	other metabolic processes	P	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase/reductase family 16C member 5)
ruditapes_c7765	retinal metabolic process	other metabolic processes	P	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase/reductase family 16C member 5)
ruditapes_c30493	response to oxidative stress	stress response	P	Oxidation resistance protein 1
ruditapes_c30493	cell wall macromolecule catabolic process	other metabolic processes	P	Oxidation resistance protein 1
ruditapes_c30493	response to stress	stress response	P	Oxidation resistance protein 1
ruditapes_c3879	autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2 (Endoplasmic reticulum intermembrane small protein) (MitoNEET-related 1 protein) (Miner1) (Nutrient-deprivation autophagy factor-1) (NAF-1)
ruditapes_c3879	regulation of autophagy	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2 (Endoplasmic reticulum intermembrane small protein) (MitoNEET-related 1 protein) (Miner1) (Nutrient-deprivation autophagy factor-1) (NAF-1)
ruditapes_c3879	mitochondrion degradation	other metabolic processes	P	CDGSH iron-sulfur domain-containing protein 2 (Endoplasmic reticulum intermembrane small protein) (MitoNEET-related 1 protein) (Miner1) (Nutrient-deprivation autophagy factor-1) (NAF-1)
ruditapes_c3879	multicellular organismal aging	developmental processes	P	CDGSH iron-sulfur domain-containing protein 2 (Endoplasmic reticulum intermembrane small protein) (MitoNEET-related 1 protein) (Miner1) (Nutrient-deprivation autophagy factor-1) (NAF-1)
ruditapes_c25576	phosphorylation	other metabolic processes	P	Calcium/calmodulin-dependent protein kinase kinase 1 (CaM-KK 1) (CaM-kinase kinase 1) (CaMKK 1) (EC 2.7.11.17) (CaM-kinase IV kinase) (Calcium/calmodulin-dependent protein kinase kinase alpha) (CaM-KK alpha) (CaM-kinase kinase alpha) (CaMKK alpha)
ruditapes_c25576	protein amino acid phosphorylation	protein metabolism	P	Calcium/calmodulin-dependent protein kinase kinase 1 (CaM-KK 1) (CaM-kinase kinase 1) (CaMKK 1) (EC 2.7.11.17) (CaM-kinase IV kinase) (Calcium/calmodulin-dependent protein kinase kinase alpha) (CaM-KK alpha) (CaM-kinase kinase alpha) (CaMKK alpha)
ruditapes_c25576	synaptic transmission	cell-cell signaling	P	Calcium/calmodulin-dependent protein kinase kinase 1 (CaM-KK 1) (CaM-kinase kinase 1) (CaMKK 1) (EC 2.7.11.17) (CaM-kinase IV kinase) (Calcium/calmodulin-dependent protein kinase kinase alpha) (CaM-KK alpha) (CaM-kinase kinase alpha) (CaMKK alpha)
ruditapes_c21520	protein amino acid dephosphorylation	protein metabolism	P	Protein KASH5 (Coiled-coil domain-containing protein 155) (KASH domain-containing protein 5)
ruditapes_c474	biological_process	other biological processes	P	Keratinocyte-associated protein 2 (KCP-2)
ruditapes2_c957	biological_process	other biological processes	P	Keratinocyte-associated protein 2 (KCP-2)
ruditapes_c15106	protein amino acid deacetylation	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-6 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 6) (SIR2-like protein 6)
ruditapes_c15106	protein amino acid ADP-ribosylation	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-6 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 6) (SIR2-like protein 6)
ruditapes_c30020	signal transduction	signal transduction	P	G-protein coupled receptor 161 (G-protein coupled receptor RE2)
ruditapes_c30020	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor 161 (G-protein coupled receptor RE2)
ruditapes_c30020	multicellular organismal development	developmental processes	P	G-protein coupled receptor 161 (G-protein coupled receptor RE2)
ruditapes_c12384	proteolysis	protein metabolism	P	Androglobin (Calpain-7-like protein)
ruditapes_c12384	oxygen transport	transport	P	Androglobin (Calpain-7-like protein)
ruditapes_c18484	protein ubiquitination	protein metabolism	P	Putative E3 ubiquitin-protein ligase UBR7 (EC 6.3.2.-) (N-recognin-7)
ruditapes_c18484	biological_process	other biological processes	P	Putative E3 ubiquitin-protein ligase UBR7 (EC 6.3.2.-) (N-recognin-7)
ruditapes_c12709	response to virus	other biological processes	P	Cyclic GMP-AMP synthase (cGAMP synthase) (cGAS) (h-cGAS) (EC 2.7.7.-) (Mab-21 domain-containing protein 1)
ruditapes_c29612	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 366
ruditapes_c29612	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 366
ruditapes_c10176	RNA splicing	RNA metabolism	P	Programmed cell death protein 7 (ES18) (hES18)
ruditapes_c10176	response to glucocorticoid stimulus	other biological processes	P	Programmed cell death protein 7 (ES18) (hES18)
ruditapes_c10176	induction of apoptosis	death	P	Programmed cell death protein 7 (ES18) (hES18)
ruditapes_c10176	apoptosis	death	P	Programmed cell death protein 7 (ES18) (hES18)
ruditapes_lrc9598	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Coiled-coil domain-containing protein 79
ruditapes_c23589	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"NFATC2-interacting protein (45 kDa NF-AT-interacting protein) (45 kDa NFAT-interacting protein) (Nuclear factor of activated T-cells, cytoplasmic 2-interacting protein)"
ruditapes_c23589	cytokine production	other biological processes	P	"NFATC2-interacting protein (45 kDa NF-AT-interacting protein) (45 kDa NFAT-interacting protein) (Nuclear factor of activated T-cells, cytoplasmic 2-interacting protein)"
ruditapes_c21935	inflammatory response	stress response	P	Carbohydrate sulfotransferase 4 (EC 2.8.2.-) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 3) (GST-3) (High endothelial cells N-acetylglucosamine 6-O-sulfotransferase) (HEC-GlcNAc6ST) (L-selectin ligand sulfotransferase) (LSST) (N-acetylglucosamine 6-O-sulfotransferase 2) (GlcNAc6ST-2) (Gn6st-2)
ruditapes_c21935	cell-cell signaling	cell-cell signaling	P	Carbohydrate sulfotransferase 4 (EC 2.8.2.-) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 3) (GST-3) (High endothelial cells N-acetylglucosamine 6-O-sulfotransferase) (HEC-GlcNAc6ST) (L-selectin ligand sulfotransferase) (LSST) (N-acetylglucosamine 6-O-sulfotransferase 2) (GlcNAc6ST-2) (Gn6st-2)
ruditapes_c21935	cell adhesion	cell adhesion	P	Carbohydrate sulfotransferase 4 (EC 2.8.2.-) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 3) (GST-3) (High endothelial cells N-acetylglucosamine 6-O-sulfotransferase) (HEC-GlcNAc6ST) (L-selectin ligand sulfotransferase) (LSST) (N-acetylglucosamine 6-O-sulfotransferase 2) (GlcNAc6ST-2) (Gn6st-2)
ruditapes_c21935	N-acetylglucosamine metabolic process	other metabolic processes	P	Carbohydrate sulfotransferase 4 (EC 2.8.2.-) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 3) (GST-3) (High endothelial cells N-acetylglucosamine 6-O-sulfotransferase) (HEC-GlcNAc6ST) (L-selectin ligand sulfotransferase) (LSST) (N-acetylglucosamine 6-O-sulfotransferase 2) (GlcNAc6ST-2) (Gn6st-2)
ruditapes_c21935	immune response	other biological processes	P	Carbohydrate sulfotransferase 4 (EC 2.8.2.-) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 3) (GST-3) (High endothelial cells N-acetylglucosamine 6-O-sulfotransferase) (HEC-GlcNAc6ST) (L-selectin ligand sulfotransferase) (LSST) (N-acetylglucosamine 6-O-sulfotransferase 2) (GlcNAc6ST-2) (Gn6st-2)
ruditapes_c21935	carbohydrate metabolic process	other metabolic processes	P	Carbohydrate sulfotransferase 4 (EC 2.8.2.-) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 3) (GST-3) (High endothelial cells N-acetylglucosamine 6-O-sulfotransferase) (HEC-GlcNAc6ST) (L-selectin ligand sulfotransferase) (LSST) (N-acetylglucosamine 6-O-sulfotransferase 2) (GlcNAc6ST-2) (Gn6st-2)
ruditapes_c21935	protein amino acid sulfation	protein metabolism	P	Carbohydrate sulfotransferase 4 (EC 2.8.2.-) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 3) (GST-3) (High endothelial cells N-acetylglucosamine 6-O-sulfotransferase) (HEC-GlcNAc6ST) (L-selectin ligand sulfotransferase) (LSST) (N-acetylglucosamine 6-O-sulfotransferase 2) (GlcNAc6ST-2) (Gn6st-2)
ruditapes_c21935	sulfur metabolic process	other metabolic processes	P	Carbohydrate sulfotransferase 4 (EC 2.8.2.-) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 3) (GST-3) (High endothelial cells N-acetylglucosamine 6-O-sulfotransferase) (HEC-GlcNAc6ST) (L-selectin ligand sulfotransferase) (LSST) (N-acetylglucosamine 6-O-sulfotransferase 2) (GlcNAc6ST-2) (Gn6st-2)
ruditapes_c21935	cell motion	other biological processes	P	Carbohydrate sulfotransferase 4 (EC 2.8.2.-) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 3) (GST-3) (High endothelial cells N-acetylglucosamine 6-O-sulfotransferase) (HEC-GlcNAc6ST) (L-selectin ligand sulfotransferase) (LSST) (N-acetylglucosamine 6-O-sulfotransferase 2) (GlcNAc6ST-2) (Gn6st-2)
ruditapes_c29041	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 34
ruditapes_c29041	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 34
ruditapes_c6920	protein amino acid glycosylation	protein metabolism	P	"UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 (Beta-1,3-GalNAc-T2) (EC 2.4.1.-) (Beta-1,3-N-acetylgalactosaminyltransferase II)"
ruditapes_c9617	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RCC1 and BTB domain-containing protein 1 (Chronic lymphocytic leukemia deletion region gene 7 protein) (CLL deletion region gene 7 protein) (Regulator of chromosome condensation and BTB domain-containing protein 1)
ruditapes_c9617	"transcription, DNA-dependent"	RNA metabolism	P	RCC1 and BTB domain-containing protein 1 (Chronic lymphocytic leukemia deletion region gene 7 protein) (CLL deletion region gene 7 protein) (Regulator of chromosome condensation and BTB domain-containing protein 1)
ruditapes_c9617	chromatin modification	cell organization and biogenesis	P	RCC1 and BTB domain-containing protein 1 (Chronic lymphocytic leukemia deletion region gene 7 protein) (CLL deletion region gene 7 protein) (Regulator of chromosome condensation and BTB domain-containing protein 1)
ruditapes_c9617	cell cycle	cell cycle and proliferation	P	RCC1 and BTB domain-containing protein 1 (Chronic lymphocytic leukemia deletion region gene 7 protein) (CLL deletion region gene 7 protein) (Regulator of chromosome condensation and BTB domain-containing protein 1)
ruditapes_c17395	protein polyubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase ZSWIM2 (EC 6.3.2.-) (MEKK1-related protein X) (MEX) (ZZ-type zinc finger-containing protein 2) (Zinc finger SWIM domain-containing protein 2)
ruditapes2_c2501	protein polyubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase ZSWIM2 (EC 6.3.2.-) (MEKK1-related protein X) (MEX) (ZZ-type zinc finger-containing protein 2) (Zinc finger SWIM domain-containing protein 2)
ruditapes2_c2501	apoptosis	death	P	E3 ubiquitin-protein ligase ZSWIM2 (EC 6.3.2.-) (MEKK1-related protein X) (MEX) (ZZ-type zinc finger-containing protein 2) (Zinc finger SWIM domain-containing protein 2)
ruditapes_c17395	regulation of apoptosis	death	P	E3 ubiquitin-protein ligase ZSWIM2 (EC 6.3.2.-) (MEKK1-related protein X) (MEX) (ZZ-type zinc finger-containing protein 2) (Zinc finger SWIM domain-containing protein 2)
ruditapes2_c2501	regulation of apoptosis	death	P	E3 ubiquitin-protein ligase ZSWIM2 (EC 6.3.2.-) (MEKK1-related protein X) (MEX) (ZZ-type zinc finger-containing protein 2) (Zinc finger SWIM domain-containing protein 2)
ruditapes_c17395	apoptosis	death	P	E3 ubiquitin-protein ligase ZSWIM2 (EC 6.3.2.-) (MEKK1-related protein X) (MEX) (ZZ-type zinc finger-containing protein 2) (Zinc finger SWIM domain-containing protein 2)
ruditapes2_c2604	spermatogenesis	other biological processes	P	Spermatogenesis-associated protein 4 (Testis and spermatogenesis cell-related protein 2) (Testis spermatocyte apoptosis-related gene 2 protein)
ruditapes2_c2604	apoptosis	death	P	Spermatogenesis-associated protein 4 (Testis and spermatogenesis cell-related protein 2) (Testis spermatocyte apoptosis-related gene 2 protein)
ruditapes_c26867	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes2_c2290	histone H3-K4 methylation	protein metabolism	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes2_c2290	histone H3-K4 methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes2_c2290	"transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes_c26867	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes2_c2290	histone methylation	protein metabolism	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes2_c2290	histone methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes_c26867	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes2_c2290	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes_c26867	histone H3-K4 methylation	protein metabolism	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes_c26867	histone H3-K4 methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes2_c2290	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes2_c2290	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes_c26867	histone methylation	protein metabolism	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes_c26867	histone methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes_c26867	"transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase MLL3 (EC 2.1.1.43) (Homologous to ALR protein) (Lysine N-methyltransferase 2C) (KMT2C) (Myeloid/lymphoid or mixed-lineage leukemia protein 3)
ruditapes2_c35	metabolic process	other metabolic processes	P	Serine protease 33 (EC 3.4.21.-) (Serine protease EOS)
ruditapes2_c35	proteolysis	protein metabolism	P	Serine protease 33 (EC 3.4.21.-) (Serine protease EOS)
ruditapes_c10549	cell death	death	P	Nesprin-1 (Enaptin) (Myocyte nuclear envelope protein 1) (Myne-1) (Nuclear envelope spectrin repeat protein 1) (Synaptic nuclear envelope protein 1) (Syne-1)
ruditapes_c10549	Golgi organization	cell organization and biogenesis	P	Nesprin-1 (Enaptin) (Myocyte nuclear envelope protein 1) (Myne-1) (Nuclear envelope spectrin repeat protein 1) (Synaptic nuclear envelope protein 1) (Syne-1)
ruditapes_c10549	muscle cell differentiation	other biological processes	P	Nesprin-1 (Enaptin) (Myocyte nuclear envelope protein 1) (Myne-1) (Nuclear envelope spectrin repeat protein 1) (Synaptic nuclear envelope protein 1) (Syne-1)
ruditapes_c10549	nucleus organization	cell organization and biogenesis	P	Nesprin-1 (Enaptin) (Myocyte nuclear envelope protein 1) (Myne-1) (Nuclear envelope spectrin repeat protein 1) (Synaptic nuclear envelope protein 1) (Syne-1)
ruditapes_c18409	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.4.19.12) (Deubiquitinating enzyme 32) (Renal carcinoma antigen NY-REN-60) (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32)
ruditapes_c18409	protein deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.4.19.12) (Deubiquitinating enzyme 32) (Renal carcinoma antigen NY-REN-60) (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32)
ruditapes_c18409	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.4.19.12) (Deubiquitinating enzyme 32) (Renal carcinoma antigen NY-REN-60) (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32)
ruditapes_c10882	regulation of protein amino acid phosphorylation	protein metabolism	P	Folliculin (BHD skin lesion fibrofolliculoma protein) (Birt-Hogg-Dube syndrome protein)
ruditapes_c12763	Golgi to plasma membrane protein transport	transport	P	Bardet-Biedl syndrome 1 protein (BBS2-like protein 2)
ruditapes_c12763	photoreceptor cell maintenance	other biological processes	P	Bardet-Biedl syndrome 1 protein (BBS2-like protein 2)
ruditapes_c12763	sensory cilium assembly	cell organization and biogenesis	P	Bardet-Biedl syndrome 1 protein (BBS2-like protein 2)
ruditapes_c12763	visual perception	other biological processes	P	Bardet-Biedl syndrome 1 protein (BBS2-like protein 2)
ruditapes_c12763	cilium assembly	cell organization and biogenesis	P	Bardet-Biedl syndrome 1 protein (BBS2-like protein 2)
ruditapes_c12763	response to stimulus	other biological processes	P	Bardet-Biedl syndrome 1 protein (BBS2-like protein 2)
ruditapes_c12763	retina homeostasis	other biological processes	P	Bardet-Biedl syndrome 1 protein (BBS2-like protein 2)
ruditapes2_c3635	cell adhesion	cell adhesion	P	Collagen alpha-1(XXII) chain
ruditapes_c29080	synaptogenesis	developmental processes	P	Neuroligin-2
ruditapes_c29080	synaptogenesis	cell organization and biogenesis	P	Neuroligin-2
ruditapes_c29080	regulation of respiratory gaseous exchange by neurological process	other biological processes	P	Neuroligin-2
ruditapes_c29080	cell adhesion	cell adhesion	P	Neuroligin-2
ruditapes_c29080	neuromuscular process controlling balance	other biological processes	P	Neuroligin-2
ruditapes_c29080	cell-cell junction maintenance	cell organization and biogenesis	P	Neuroligin-2
ruditapes_c29080	regulation of synaptic transmission	cell-cell signaling	P	Neuroligin-2
ruditapes_c29080	cell-cell adhesion	cell adhesion	P	Neuroligin-2
ruditapes_c29080	"positive regulation of synaptic transmission, GABAergic"	cell-cell signaling	P	Neuroligin-2
ruditapes_c29080	sensory perception of pain	other biological processes	P	Neuroligin-2
ruditapes_c29080	neuron adhesion	cell adhesion	P	Neuroligin-2
ruditapes_c29080	"positive regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	Neuroligin-2
ruditapes_c29080	positive regulation of synaptogenesis	developmental processes	P	Neuroligin-2
ruditapes_c29080	positive regulation of synaptogenesis	cell organization and biogenesis	P	Neuroligin-2
ruditapes_c29080	positive regulation of synaptogenesis	cell-cell signaling	P	Neuroligin-2
ruditapes_c29080	synapse organization	cell organization and biogenesis	P	Neuroligin-2
ruditapes_c12913	mitotic cell cycle	cell cycle and proliferation	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	acrosome assembly	cell organization and biogenesis	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	M phase of mitotic cell cycle	cell cycle and proliferation	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	chromosome segregation	other biological processes	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	negative regulation of phosphatase activity	other metabolic processes	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	attachment of spindle microtubules to kinetochore	cell organization and biogenesis	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	cell cycle	cell cycle and proliferation	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	CenH3-containing nucleosome assembly at centromere	cell organization and biogenesis	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	nucleosome assembly	cell organization and biogenesis	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	mitotic prometaphase	cell cycle and proliferation	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	mitotic prometaphase	cell organization and biogenesis	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	cell division	other biological processes	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	mitosis	cell cycle and proliferation	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c12913	mitosis	cell organization and biogenesis	P	Protein CASC5 (ALL1-fused gene from chromosome 15q14 protein) (AF15q14) (Bub-linking kinetochore protein) (Blinkin) (Cancer susceptibility candidate gene 5 protein) (Cancer/testis antigen 29) (CT29) (Kinetochore-null protein 1) (Protein D40/AF15q14)
ruditapes_c7377	signal transduction	signal transduction	P	Olfactory receptor 8G5 (Olfactory receptor 8G6) (Olfactory receptor OR11-298)
ruditapes_c7377	response to stimulus	other biological processes	P	Olfactory receptor 8G5 (Olfactory receptor 8G6) (Olfactory receptor OR11-298)
ruditapes_c7377	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 8G5 (Olfactory receptor 8G6) (Olfactory receptor OR11-298)
ruditapes_c7377	sensory perception of smell	other biological processes	P	Olfactory receptor 8G5 (Olfactory receptor 8G6) (Olfactory receptor OR11-298)
ruditapes_c7377	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 8G5 (Olfactory receptor 8G6) (Olfactory receptor OR11-298)
ruditapes_c21125	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 4M2 (Olfactory receptor OR15-3)
ruditapes_c21125	response to stimulus	other biological processes	P	Olfactory receptor 4M2 (Olfactory receptor OR15-3)
ruditapes_c21125	signal transduction	signal transduction	P	Olfactory receptor 4M2 (Olfactory receptor OR15-3)
ruditapes_c21125	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 4M2 (Olfactory receptor OR15-3)
ruditapes_c21125	sensory perception of smell	other biological processes	P	Olfactory receptor 4M2 (Olfactory receptor OR15-3)
ruditapes_lrc32140	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 10P1 (Olfactory receptor 10P2) (Olfactory receptor 10P3) (Olfactory receptor OR12-7)
ruditapes_lrc32140	sensory perception of smell	other biological processes	P	Olfactory receptor 10P1 (Olfactory receptor 10P2) (Olfactory receptor 10P3) (Olfactory receptor OR12-7)
ruditapes_lrc32140	response to stimulus	other biological processes	P	Olfactory receptor 10P1 (Olfactory receptor 10P2) (Olfactory receptor 10P3) (Olfactory receptor OR12-7)
ruditapes_lrc32140	signal transduction	signal transduction	P	Olfactory receptor 10P1 (Olfactory receptor 10P2) (Olfactory receptor 10P3) (Olfactory receptor OR12-7)
ruditapes_lrc32140	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 10P1 (Olfactory receptor 10P2) (Olfactory receptor 10P3) (Olfactory receptor OR12-7)
ruditapes_c20126	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 9K2 (Olfactory receptor OR12-2)
ruditapes_c20126	sensory perception of smell	other biological processes	P	Olfactory receptor 9K2 (Olfactory receptor OR12-2)
ruditapes_c20126	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 9K2 (Olfactory receptor OR12-2)
ruditapes_c20126	response to stimulus	other biological processes	P	Olfactory receptor 9K2 (Olfactory receptor OR12-2)
ruditapes_c20126	signal transduction	signal transduction	P	Olfactory receptor 9K2 (Olfactory receptor OR12-2)
ruditapes_c21666	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 5B17 (Olfactory receptor 5B20) (Olfactory receptor OR11-237)
ruditapes_c21666	sensory perception of smell	other biological processes	P	Olfactory receptor 5B17 (Olfactory receptor 5B20) (Olfactory receptor OR11-237)
ruditapes_c21666	response to stimulus	other biological processes	P	Olfactory receptor 5B17 (Olfactory receptor 5B20) (Olfactory receptor OR11-237)
ruditapes_c21666	signal transduction	signal transduction	P	Olfactory receptor 5B17 (Olfactory receptor 5B20) (Olfactory receptor OR11-237)
ruditapes_c21666	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 5B17 (Olfactory receptor 5B20) (Olfactory receptor OR11-237)
ruditapes_c18166	sensory perception of smell	other biological processes	P	Olfactory receptor 52M1 (Olfactory receptor OR11-11)
ruditapes_c18166	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 52M1 (Olfactory receptor OR11-11)
ruditapes_c18166	signal transduction	signal transduction	P	Olfactory receptor 52M1 (Olfactory receptor OR11-11)
ruditapes_c18166	response to stimulus	other biological processes	P	Olfactory receptor 52M1 (Olfactory receptor OR11-11)
ruditapes_c18166	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 52M1 (Olfactory receptor OR11-11)
ruditapes_c10649	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 5D13 (Olfactory receptor OR11-142) (Olfactory receptor OR11-148)
ruditapes_c10649	sensory perception of smell	other biological processes	P	Olfactory receptor 5D13 (Olfactory receptor OR11-142) (Olfactory receptor OR11-148)
ruditapes_c10649	response to stimulus	other biological processes	P	Olfactory receptor 5D13 (Olfactory receptor OR11-142) (Olfactory receptor OR11-148)
ruditapes_c10649	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 5D13 (Olfactory receptor OR11-142) (Olfactory receptor OR11-148)
ruditapes_c10649	signal transduction	signal transduction	P	Olfactory receptor 5D13 (Olfactory receptor OR11-142) (Olfactory receptor OR11-148)
ruditapes_c22420	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 1K1
ruditapes_c22420	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 1K1
ruditapes_c9694	sensory perception of smell	other biological processes	P	Olfactory receptor 1K1
ruditapes_c9694	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 1K1
ruditapes_c9694	response to stimulus	other biological processes	P	Olfactory receptor 1K1
ruditapes_c22420	signal transduction	signal transduction	P	Olfactory receptor 1K1
ruditapes_c9694	signal transduction	signal transduction	P	Olfactory receptor 1K1
ruditapes_c9694	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 1K1
ruditapes_c22420	sensory perception of smell	other biological processes	P	Olfactory receptor 1K1
ruditapes_c22420	response to stimulus	other biological processes	P	Olfactory receptor 1K1
ruditapes_lrc33784	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 1J4 (HTPCRX01) (Olfactory receptor OR9-21)
ruditapes_lrc33784	response to stimulus	other biological processes	P	Olfactory receptor 1J4 (HTPCRX01) (Olfactory receptor OR9-21)
ruditapes_lrc33784	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 1J4 (HTPCRX01) (Olfactory receptor OR9-21)
ruditapes_lrc33784	sensory perception of smell	other biological processes	P	Olfactory receptor 1J4 (HTPCRX01) (Olfactory receptor OR9-21)
ruditapes_lrc33784	signal transduction	signal transduction	P	Olfactory receptor 1J4 (HTPCRX01) (Olfactory receptor OR9-21)
ruditapes_c28001	sensory perception of smell	other biological processes	P	Olfactory receptor 2K2 (HTPCRH06) (Olfactory receptor OR9-17)
ruditapes_c28001	response to stimulus	other biological processes	P	Olfactory receptor 2K2 (HTPCRH06) (Olfactory receptor OR9-17)
ruditapes_c28001	signal transduction	signal transduction	P	Olfactory receptor 2K2 (HTPCRH06) (Olfactory receptor OR9-17)
ruditapes_c28001	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 2K2 (HTPCRH06) (Olfactory receptor OR9-17)
ruditapes_c28001	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 2K2 (HTPCRH06) (Olfactory receptor OR9-17)
ruditapes_c13692	signal transduction	signal transduction	P	Olfactory receptor 13D1 (Olfactory receptor OR9-15)
ruditapes_c13692	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 13D1 (Olfactory receptor OR9-15)
ruditapes_c13692	response to stimulus	other biological processes	P	Olfactory receptor 13D1 (Olfactory receptor OR9-15)
ruditapes_c13692	sensory perception of smell	other biological processes	P	Olfactory receptor 13D1 (Olfactory receptor OR9-15)
ruditapes_c13692	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 13D1 (Olfactory receptor OR9-15)
ruditapes_c10110	sensory perception of smell	other biological processes	P	Olfactory receptor 6B3 (Olfactory receptor OR2-2)
ruditapes_c10110	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 6B3 (Olfactory receptor OR2-2)
ruditapes_c10110	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 6B3 (Olfactory receptor OR2-2)
ruditapes_c10110	response to stimulus	other biological processes	P	Olfactory receptor 6B3 (Olfactory receptor OR2-2)
ruditapes_c10110	signal transduction	signal transduction	P	Olfactory receptor 6B3 (Olfactory receptor OR2-2)
ruditapes_c17242	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 6N2 (Olfactory receptor OR1-23)
ruditapes_c17242	response to stimulus	other biological processes	P	Olfactory receptor 6N2 (Olfactory receptor OR1-23)
ruditapes_c17242	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 6N2 (Olfactory receptor OR1-23)
ruditapes_c17242	signal transduction	signal transduction	P	Olfactory receptor 6N2 (Olfactory receptor OR1-23)
ruditapes_c17242	sensory perception of smell	other biological processes	P	Olfactory receptor 6N2 (Olfactory receptor OR1-23)
ruditapes_c15806	response to stimulus	other biological processes	P	Olfactory receptor 2G2 (Olfactory receptor OR1-32)
ruditapes_c15806	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 2G2 (Olfactory receptor OR1-32)
ruditapes_c15806	sensory perception of smell	other biological processes	P	Olfactory receptor 2G2 (Olfactory receptor OR1-32)
ruditapes_c15806	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 2G2 (Olfactory receptor OR1-32)
ruditapes_c15806	signal transduction	signal transduction	P	Olfactory receptor 2G2 (Olfactory receptor OR1-32)
ruditapes_c23982	sensory perception of smell	other biological processes	P	Olfactory receptor 4Q3 (Olfactory receptor 4Q4) (Olfactory receptor OR14-3)
ruditapes_c23982	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 4Q3 (Olfactory receptor 4Q4) (Olfactory receptor OR14-3)
ruditapes_c23982	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 4Q3 (Olfactory receptor 4Q4) (Olfactory receptor OR14-3)
ruditapes_c23982	signal transduction	signal transduction	P	Olfactory receptor 4Q3 (Olfactory receptor 4Q4) (Olfactory receptor OR14-3)
ruditapes_c23982	response to stimulus	other biological processes	P	Olfactory receptor 4Q3 (Olfactory receptor 4Q4) (Olfactory receptor OR14-3)
ruditapes_s39007	oxidation reduction	other metabolic processes	P	Delta(8)-fatty-acid desaturase (EC 1.14.19.4) (Delta(8)-sphingolipid desaturase)
ruditapes_s39007	lipid metabolic process	other metabolic processes	P	Delta(8)-fatty-acid desaturase (EC 1.14.19.4) (Delta(8)-sphingolipid desaturase)
ruditapes_s39007	fatty acid biosynthetic process	other metabolic processes	P	Delta(8)-fatty-acid desaturase (EC 1.14.19.4) (Delta(8)-sphingolipid desaturase)
ruditapes_lrc34850	glycyl-tRNA aminoacylation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_lrc34850	glycyl-tRNA aminoacylation	RNA metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_lrc34850	translation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_lrc34850	tRNA aminoacylation for protein translation	protein metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_lrc34850	tRNA aminoacylation for protein translation	RNA metabolism	P	Glycine--tRNA ligase (EC 6.1.1.14) (Glycyl-tRNA synthetase) (GlyRS)
ruditapes_c55	oxidation reduction	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes2_c51	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes_c55	UMP biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes2_c51	UMP biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes2_c51	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes_c55	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes_c55	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes2_c51	oxidation reduction	other metabolic processes	P	Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) (DHOdehase) (DHOD) (DHODase) (Dihydroorotate oxidase)
ruditapes_lrc30597	tRNA aminoacylation for protein translation	protein metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_lrc30597	tRNA aminoacylation for protein translation	RNA metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_lrc30597	translation	protein metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_lrc30597	tryptophanyl-tRNA aminoacylation	protein metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_lrc30597	tryptophanyl-tRNA aminoacylation	RNA metabolism	P	Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)
ruditapes_c12778	pyrimidine base metabolic process	other metabolic processes	P	Pyrimidine-nucleoside phosphorylase (PYNP) (EC 2.4.2.2)
ruditapes_c12778	metabolic process	other metabolic processes	P	Pyrimidine-nucleoside phosphorylase (PYNP) (EC 2.4.2.2)
ruditapes_c12778	pyrimidine nucleoside metabolic process	other metabolic processes	P	Pyrimidine-nucleoside phosphorylase (PYNP) (EC 2.4.2.2)
ruditapes_c24208	cytolysis of cells of another organism	other biological processes	P	Uncharacterized leukocidin-like protein 2
ruditapes_c17276	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase 2) (GSA-AT 2)"
ruditapes_c17276	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase 2) (GSA-AT 2)"
ruditapes_c12780	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Catabolite control protein A
ruditapes_c12780	"transcription, DNA-dependent"	RNA metabolism	P	Catabolite control protein A
ruditapes2_c337	tetrapyrrole biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase 1 (GSA 1) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase 1) (GSA-AT 1)"
ruditapes2_c337	porphyrin biosynthetic process	other metabolic processes	P	"Glutamate-1-semialdehyde 2,1-aminomutase 1 (GSA 1) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase 1) (GSA-AT 1)"
ruditapes2_lrc3548	mismatch repair	stress response	P	MutS2 protein
ruditapes2_lrc3548	mismatch repair	DNA metabolism	P	MutS2 protein
ruditapes2_lrc3548	maintenance of fidelity during DNA-dependent DNA replication	DNA metabolism	P	MutS2 protein
ruditapes_c4765	isoprenoid biosynthetic process	other metabolic processes	P	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1) (MEP cytidylyltransferase 1) (MCT 1)
ruditapes_c1084	isoprenoid biosynthetic process	other metabolic processes	P	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1) (MEP cytidylyltransferase 1) (MCT 1)
ruditapes_c5868	protein folding	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes_c5868	protein refolding	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes_c5868	cellular protein metabolic process	protein metabolism	P	60 kDa chaperonin (GroEL protein) (Protein Cpn60)
ruditapes_c25497	potassium ion transport	transport	P	Probable potassium transport system protein kup
ruditapes_c25497	transport	transport	P	Probable potassium transport system protein kup
ruditapes_c25497	ion transport	transport	P	Probable potassium transport system protein kup
ruditapes_c18884	methionine biosynthetic process	other metabolic processes	P	Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine O-trans-acetylase) (HTA) (Homoserine transacetylase)
ruditapes_c18884	cellular amino acid biosynthetic process	other metabolic processes	P	Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine O-trans-acetylase) (HTA) (Homoserine transacetylase)
ruditapes2_c184	D-xylose metabolic process	other metabolic processes	P	Xylose isomerase 1 (EC 5.3.1.5)
ruditapes2_c184	pentose-phosphate shunt	other metabolic processes	P	Xylose isomerase 1 (EC 5.3.1.5)
ruditapes2_c184	carbohydrate metabolic process	other metabolic processes	P	Xylose isomerase 1 (EC 5.3.1.5)
ruditapes_lrc27945	translation	protein metabolism	P	30S ribosomal protein S16
ruditapes_c22690	tetrapyrrole biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c22690	porphyrin biosynthetic process	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c22690	oxidation reduction	other metabolic processes	P	Glutamyl-tRNA reductase (GluTR) (EC 1.2.1.70)
ruditapes_c23894	glutamine metabolic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase)
ruditapes_c23894	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase)
ruditapes_c23894	'de novo' IMP biosynthetic process	other metabolic processes	P	Phosphoribosylformylglycinamidine synthase (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase)
ruditapes2_c6830	glycogen biosynthetic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB 2 (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 2) (Alpha-(1->4)-glucan branching enzyme 2) (Glycogen branching enzyme 2) (BE 2)"
ruditapes2_c6830	carbohydrate metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB 2 (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 2) (Alpha-(1->4)-glucan branching enzyme 2) (Glycogen branching enzyme 2) (BE 2)"
ruditapes2_c6830	glycogen metabolic process	other metabolic processes	P	"1,4-alpha-glucan branching enzyme GlgB 2 (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 2) (Alpha-(1->4)-glucan branching enzyme 2) (Glycogen branching enzyme 2) (BE 2)"
ruditapes_c26498	nucleoside metabolic process	other metabolic processes	P	PyrE-like protein
ruditapes_c27217	DNA replication	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c27217	DNA catabolic process	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c27217	metabolic process	other metabolic processes	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7)
ruditapes_c15682	cellular amino acid biosynthetic process	other metabolic processes	P	Arginine biosynthesis bifunctional protein ArgJ [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGSase)]
ruditapes_c15682	arginine biosynthetic process	other metabolic processes	P	Arginine biosynthesis bifunctional protein ArgJ [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGSase)]
ruditapes_c15682	metabolic process	other metabolic processes	P	Arginine biosynthesis bifunctional protein ArgJ [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGSase)]
ruditapes_c16958	ornithine metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c16958	arginine biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c16958	cellular amino acid biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c16958	cellular amino acid metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c31279	response to stress	stress response	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes2_c6519	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes_c31279	protein neddylation	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes_c31279	protein ubiquitination	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes2_c6519	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes_s34089	protein neddylation	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes_s34089	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes2_c6519	protein ubiquitination	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes_s34089	protein ubiquitination	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes_c31279	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes_s34089	response to stress	stress response	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes2_c6519	response to stress	stress response	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes_s34089	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes_c31279	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes2_c6519	protein neddylation	protein metabolism	P	RING-box protein 1 (Rbx1) (Hyperosmotic protein 21) (sHOP21)
ruditapes_c5190	cell adhesion	cell adhesion	P	Cadherin-20 (F-cadherin) (MN-cadherin)
ruditapes_c5190	homophilic cell adhesion	cell adhesion	P	Cadherin-20 (F-cadherin) (MN-cadherin)
ruditapes2_c3252	"transcription, DNA-dependent"	RNA metabolism	P	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LPS-induced TNF-alpha factor homolog) (Small integral membrane protein of lysosome/late endosome)
ruditapes_c3601	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LPS-induced TNF-alpha factor homolog) (Small integral membrane protein of lysosome/late endosome)
ruditapes_c5298	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LPS-induced TNF-alpha factor homolog) (Small integral membrane protein of lysosome/late endosome)
ruditapes2_c3252	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LPS-induced TNF-alpha factor homolog) (Small integral membrane protein of lysosome/late endosome)
ruditapes_c3601	"transcription, DNA-dependent"	RNA metabolism	P	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LPS-induced TNF-alpha factor homolog) (Small integral membrane protein of lysosome/late endosome)
ruditapes_c5298	"transcription, DNA-dependent"	RNA metabolism	P	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LPS-induced TNF-alpha factor homolog) (Small integral membrane protein of lysosome/late endosome)
ruditapes2_c100	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LPS-induced TNF-alpha factor homolog) (Small integral membrane protein of lysosome/late endosome)
ruditapes2_c100	"transcription, DNA-dependent"	RNA metabolism	P	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LPS-induced TNF-alpha factor homolog) (Small integral membrane protein of lysosome/late endosome)
ruditapes_c30413	double-strand break repair	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c30413	double-strand break repair	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c30413	double-strand break repair via homologous recombination	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c30413	double-strand break repair via homologous recombination	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c30413	double-strand break repair via nonhomologous end joining	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c30413	double-strand break repair via nonhomologous end joining	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c30413	response to DNA damage stimulus	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c30413	DNA repair	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c30413	DNA repair	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c30413	phosphorylation	other metabolic processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c19520	negative regulation of fibroblast growth factor receptor signaling pathway	signal transduction	P	Interleukin-17 receptor D (IL-17 receptor D) (IL-17RD) (Similar expression to FGF genes protein) (Sef)
ruditapes_c19520	inactivation of MAPK activity	signal transduction	P	Interleukin-17 receptor D (IL-17 receptor D) (IL-17RD) (Similar expression to FGF genes protein) (Sef)
ruditapes_c19520	inactivation of MAPK activity	other metabolic processes	P	Interleukin-17 receptor D (IL-17 receptor D) (IL-17RD) (Similar expression to FGF genes protein) (Sef)
ruditapes_c19520	dorsal/ventral pattern formation	developmental processes	P	Interleukin-17 receptor D (IL-17 receptor D) (IL-17RD) (Similar expression to FGF genes protein) (Sef)
ruditapes_c26983	proteolysis	protein metabolism	P	Snake venom serine protease catroxase-1 (SVSP) (EC 3.4.21.-) (Catroxase I)
ruditapes_c11413	biosynthetic process	other metabolic processes	P	Uncharacterized glycosyltransferase 335 (EC 2.4.-.-)
ruditapes_c22235	RNA biosynthetic process	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c22235	RNA processing	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c22235	proteolysis	protein metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c22235	metabolic process	other metabolic processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c22235	viral genome replication	other biological processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c22235	mRNA processing	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c22235	mRNA methylation	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c22235	"transcription, DNA-dependent"	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c22235	mRNA capping	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c22235	methylation	other metabolic processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c22254	"transcription, DNA-dependent"	RNA metabolism	P	Transcript termination protein A18 (EC 3.6.4.-)
ruditapes_c2998	proteolysis	protein metabolism	P	RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent helicase (EC 3.6.4.-) (1B) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (1C-VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (1D-PRO); RNA-directed RNA polymerase (EC 2.7.7.48) (1E-POL)]
ruditapes_c2998	RNA biosynthetic process	RNA metabolism	P	RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent helicase (EC 3.6.4.-) (1B) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (1C-VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (1D-PRO); RNA-directed RNA polymerase (EC 2.7.7.48) (1E-POL)]
ruditapes_c2998	viral genome replication	other biological processes	P	RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent helicase (EC 3.6.4.-) (1B) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (1C-VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (1D-PRO); RNA-directed RNA polymerase (EC 2.7.7.48) (1E-POL)]
ruditapes_c2998	"transcription, DNA-dependent"	RNA metabolism	P	RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent helicase (EC 3.6.4.-) (1B) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (1C-VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (1D-PRO); RNA-directed RNA polymerase (EC 2.7.7.48) (1E-POL)]
ruditapes_c2998	RNA-protein covalent cross-linking	protein metabolism	P	RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent helicase (EC 3.6.4.-) (1B) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (1C-VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (1D-PRO); RNA-directed RNA polymerase (EC 2.7.7.48) (1E-POL)]
ruditapes2_c6237	RNA processing	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6237	mRNA methylation	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6237	RNA biosynthetic process	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6925	viral genome replication	other biological processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6925	"transcription, DNA-dependent"	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6237	viral genome replication	other biological processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6237	mRNA capping	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6237	proteolysis	protein metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6925	metabolic process	other metabolic processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6237	mRNA processing	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6925	proteolysis	protein metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6925	RNA biosynthetic process	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6237	methylation	other metabolic processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6925	RNA processing	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6925	mRNA methylation	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6237	"transcription, DNA-dependent"	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6925	mRNA processing	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6237	metabolic process	other metabolic processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6925	methylation	other metabolic processes	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes2_c6925	mRNA capping	RNA metabolism	P	Non-structural polyprotein (Polyprotein nsP1234) (P1234) [Cleaved into: P123; P123'; mRNA-capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Non-structural protein 1); Protease nsP2 (EC 3.1.3.33) (EC 3.4.22.-) (EC 3.6.1.15) (EC 3.6.4.13) (Non-structural protein 2) (nsP2); Non-structural protein 3 (nsP3); Non-structural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Non-structural protein 4) (nsP4)]
ruditapes_c8404	aromatic amino acid family metabolic process	other metabolic processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	2-oxoglutarate metabolic process	other metabolic processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	response to glucocorticoid stimulus	other biological processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	response to mercury ion	other biological processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	response to oxidative stress	stress response	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	tyrosine catabolic process	other metabolic processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	aromatic amino acid family catabolic process	other metabolic processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	glutamate metabolic process	other metabolic processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	biosynthetic process	other metabolic processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	response to organic cyclic substance	other biological processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	L-phenylalanine catabolic process	other metabolic processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	cellular amino acid metabolic process	other metabolic processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c8404	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)
ruditapes_c7101	biological_process	other biological processes	P	RING finger protein 183
ruditapes_c23332	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1)
ruditapes_c23332	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1)
ruditapes_c23332	peptidyl-serine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1)
ruditapes_c23332	peptidyl-threonine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1)
ruditapes_c23332	brain development	developmental processes	P	Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1)
ruditapes2_c674	cell division	other biological processes	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes2_c674	mitosis	cell cycle and proliferation	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes2_c674	mitosis	cell organization and biogenesis	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c19318	mitosis	cell organization and biogenesis	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_lrc34137	cell cycle	cell cycle and proliferation	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c19318	cell division	other biological processes	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c4375	cell cycle	cell cycle and proliferation	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_lrc34137	cell division	other biological processes	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c19318	mitosis	cell cycle and proliferation	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c19318	cell cycle	cell cycle and proliferation	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c5940	cell cycle	cell cycle and proliferation	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c4375	cell division	other biological processes	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes2_c674	cell cycle	cell cycle and proliferation	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c4375	mitosis	cell cycle and proliferation	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c4375	mitosis	cell organization and biogenesis	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c5940	cell division	other biological processes	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c5940	mitosis	cell cycle and proliferation	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_c5940	mitosis	cell organization and biogenesis	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_lrc34137	mitosis	cell cycle and proliferation	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes_lrc34137	mitosis	cell organization and biogenesis	P	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)
ruditapes2_c1697	mitochondrial translational termination	protein metabolism	P	"Peptidyl-tRNA hydrolase ICT1, mitochondrial (EC 3.1.1.29) (Immature colon carcinoma transcript 1 protein homolog)"
ruditapes2_c1697	mitochondrial translational termination	cell organization and biogenesis	P	"Peptidyl-tRNA hydrolase ICT1, mitochondrial (EC 3.1.1.29) (Immature colon carcinoma transcript 1 protein homolog)"
ruditapes2_c1697	translation	protein metabolism	P	"Peptidyl-tRNA hydrolase ICT1, mitochondrial (EC 3.1.1.29) (Immature colon carcinoma transcript 1 protein homolog)"
ruditapes2_c1697	translational termination	protein metabolism	P	"Peptidyl-tRNA hydrolase ICT1, mitochondrial (EC 3.1.1.29) (Immature colon carcinoma transcript 1 protein homolog)"
ruditapes2_c1697	translational termination	cell organization and biogenesis	P	"Peptidyl-tRNA hydrolase ICT1, mitochondrial (EC 3.1.1.29) (Immature colon carcinoma transcript 1 protein homolog)"
ruditapes_c11157	angiogenesis	developmental processes	P	Sushi repeat-containing protein SRPX2
ruditapes_c11157	cell adhesion	cell adhesion	P	Sushi repeat-containing protein SRPX2
ruditapes_c11157	cell-cell adhesion	cell adhesion	P	Sushi repeat-containing protein SRPX2
ruditapes_c11157	cell motility	other biological processes	P	Sushi repeat-containing protein SRPX2
ruditapes_c11157	regulation of phosphorylation	other metabolic processes	P	Sushi repeat-containing protein SRPX2
ruditapes_c23539	carbohydrate metabolic process	other metabolic processes	P	UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
ruditapes_c23539	cellular metabolic process	other metabolic processes	P	UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
ruditapes_c23539	galactose catabolic process	other metabolic processes	P	UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
ruditapes_c23539	galactose metabolic process	other metabolic processes	P	UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
ruditapes_c12988	nuclear pore organization	cell organization and biogenesis	P	Nuclear pore complex protein Nup133 (133 kDa nucleoporin) (Nucleoporin Nup133)
ruditapes_c12988	mRNA transport	transport	P	Nuclear pore complex protein Nup133 (133 kDa nucleoporin) (Nucleoporin Nup133)
ruditapes_c12988	transport	transport	P	Nuclear pore complex protein Nup133 (133 kDa nucleoporin) (Nucleoporin Nup133)
ruditapes_c12988	protein transport	transport	P	Nuclear pore complex protein Nup133 (133 kDa nucleoporin) (Nucleoporin Nup133)
ruditapes_c12988	mRNA export from nucleus	transport	P	Nuclear pore complex protein Nup133 (133 kDa nucleoporin) (Nucleoporin Nup133)
ruditapes_c12988	paraxial mesoderm development	developmental processes	P	Nuclear pore complex protein Nup133 (133 kDa nucleoporin) (Nucleoporin Nup133)
ruditapes_c26172	transmembrane transport	transport	P	Monocarboxylate transporter 5 (MCT 5)
ruditapes_c12260	biological_process	other biological processes	P	Monocarboxylate transporter 5 (MCT 5)
ruditapes_c26172	biological_process	other biological processes	P	Monocarboxylate transporter 5 (MCT 5)
ruditapes_c12260	transmembrane transport	transport	P	Monocarboxylate transporter 5 (MCT 5)
ruditapes_c22336	signal transduction	signal transduction	P	Angiopoietin-related protein 6 (Angiopoietin-like protein 6) (Angiopoietin-related growth factor)
ruditapes_c20303	angiogenesis	developmental processes	P	Angiopoietin-related protein 6 (Angiopoietin-like protein 6) (Angiopoietin-related growth factor)
ruditapes_c22336	cell differentiation	other biological processes	P	Angiopoietin-related protein 6 (Angiopoietin-like protein 6) (Angiopoietin-related growth factor)
ruditapes_c20303	cell differentiation	other biological processes	P	Angiopoietin-related protein 6 (Angiopoietin-like protein 6) (Angiopoietin-related growth factor)
ruditapes_c20303	signal transduction	signal transduction	P	Angiopoietin-related protein 6 (Angiopoietin-like protein 6) (Angiopoietin-related growth factor)
ruditapes_c22336	angiogenesis	developmental processes	P	Angiopoietin-related protein 6 (Angiopoietin-like protein 6) (Angiopoietin-related growth factor)
ruditapes_c22336	multicellular organismal development	developmental processes	P	Angiopoietin-related protein 6 (Angiopoietin-like protein 6) (Angiopoietin-related growth factor)
ruditapes_c20303	multicellular organismal development	developmental processes	P	Angiopoietin-related protein 6 (Angiopoietin-like protein 6) (Angiopoietin-related growth factor)
ruditapes_c7801	FAD biosynthetic process	other metabolic processes	P	FAD synthase (EC 2.7.7.2) (FAD pyrophosphorylase) (FMN adenylyltransferase) (Flavin adenine dinucleotide synthase) [Includes: Molybdenum cofactor biosynthesis protein-like region; FAD synthase region]
ruditapes_c7801	metabolic process	other metabolic processes	P	FAD synthase (EC 2.7.7.2) (FAD pyrophosphorylase) (FMN adenylyltransferase) (Flavin adenine dinucleotide synthase) [Includes: Molybdenum cofactor biosynthesis protein-like region; FAD synthase region]
ruditapes_c7801	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	FAD synthase (EC 2.7.7.2) (FAD pyrophosphorylase) (FMN adenylyltransferase) (Flavin adenine dinucleotide synthase) [Includes: Molybdenum cofactor biosynthesis protein-like region; FAD synthase region]
ruditapes_c7555	biological_process	other biological processes	P	NFX1-type zinc finger-containing protein 1
ruditapes_c16015	biological_process	other biological processes	P	NFX1-type zinc finger-containing protein 1
ruditapes_c11170	biosynthetic process	other metabolic processes	P	"S-acyl fatty acid synthase thioesterase, medium chain (EC 3.1.2.14) (Oleoyl-ACP hydrolase) (Thioesterase II) (Thioesterase domain-containing protein 1)"
ruditapes_c11170	lipid biosynthetic process	other metabolic processes	P	"S-acyl fatty acid synthase thioesterase, medium chain (EC 3.1.2.14) (Oleoyl-ACP hydrolase) (Thioesterase II) (Thioesterase domain-containing protein 1)"
ruditapes_c11170	biological_process	other biological processes	P	"S-acyl fatty acid synthase thioesterase, medium chain (EC 3.1.2.14) (Oleoyl-ACP hydrolase) (Thioesterase II) (Thioesterase domain-containing protein 1)"
ruditapes_c11170	fatty acid biosynthetic process	other metabolic processes	P	"S-acyl fatty acid synthase thioesterase, medium chain (EC 3.1.2.14) (Oleoyl-ACP hydrolase) (Thioesterase II) (Thioesterase domain-containing protein 1)"
ruditapes_c13584	tRNA processing	RNA metabolism	P	Ribonuclease P protein subunit p40 (RNaseP protein p40) (EC 3.1.26.5)
ruditapes_c23381	phosphorylation	other metabolic processes	P	Ribokinase (EC 2.7.1.15)
ruditapes_c23381	biological_process	other biological processes	P	Ribokinase (EC 2.7.1.15)
ruditapes_c23381	D-ribose metabolic process	other metabolic processes	P	Ribokinase (EC 2.7.1.15)
ruditapes_c23381	carbohydrate metabolic process	other metabolic processes	P	Ribokinase (EC 2.7.1.15)
ruditapes_c10324	carbohydrate metabolic process	other metabolic processes	P	Di-N-acetylchitobiase (EC 3.2.1.-)
ruditapes_c10324	chitin catabolic process	other metabolic processes	P	Di-N-acetylchitobiase (EC 3.2.1.-)
ruditapes_c10324	oligosaccharide catabolic process	other metabolic processes	P	Di-N-acetylchitobiase (EC 3.2.1.-)
ruditapes_c10324	metabolic process	other metabolic processes	P	Di-N-acetylchitobiase (EC 3.2.1.-)
ruditapes_c24798	monosaccharide metabolic process	other metabolic processes	P	Fucose mutarotase (EC 5.1.3.n2)
ruditapes_c24798	fucose metabolic process	other metabolic processes	P	Fucose mutarotase (EC 5.1.3.n2)
ruditapes_c19061	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Deoxynucleotidyltransferase terminal-interacting protein 2
ruditapes_c19061	biological_process	other biological processes	P	Deoxynucleotidyltransferase terminal-interacting protein 2
ruditapes_c19061	"transcription, DNA-dependent"	RNA metabolism	P	Deoxynucleotidyltransferase terminal-interacting protein 2
ruditapes_c376	intracellular protein transport	transport	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c376	vesicle-mediated transport	transport	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c376	protein transport	transport	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c376	transport	transport	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c376	endosome organization	cell organization and biogenesis	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c376	lysosome organization	cell organization and biogenesis	P	Vacuolar protein sorting-associated protein 18 homolog
ruditapes_c2219	biological_process	other biological processes	P	Solute carrier family 35 member F5
ruditapes_c2219	transport	transport	P	Solute carrier family 35 member F5
ruditapes_c8690	biological_process	other biological processes	P	Zinc finger HIT domain-containing protein 1
ruditapes_c24182	ribosomal small subunit biogenesis	other biological processes	P	Nucleolar protein 14 (Nucleolar complex protein 14)
ruditapes_c24182	biological_process	other biological processes	P	Nucleolar protein 14 (Nucleolar complex protein 14)
ruditapes_c24182	rRNA processing	RNA metabolism	P	Nucleolar protein 14 (Nucleolar complex protein 14)
ruditapes_c24182	ribosome biogenesis	other biological processes	P	Nucleolar protein 14 (Nucleolar complex protein 14)
ruditapes_c9799	biological_process	other biological processes	P	Ankyrin repeat domain-containing protein 32 (BRCT domain-containing protein 1)
ruditapes_lrc38517	aging	other biological processes	P	Interferon alpha-inducible protein 27-like protein 2A (Interferon-stimulated gene 12 protein) (ISG12)
ruditapes_lrc38517	response to virus	other biological processes	P	Interferon alpha-inducible protein 27-like protein 2A (Interferon-stimulated gene 12 protein) (ISG12)
ruditapes_lrc33855	response to virus	other biological processes	P	Interferon alpha-inducible protein 27-like protein 2A (Interferon-stimulated gene 12 protein) (ISG12)
ruditapes_s37183	response to virus	other biological processes	P	Interferon alpha-inducible protein 27-like protein 2A (Interferon-stimulated gene 12 protein) (ISG12)
ruditapes_s37183	aging	other biological processes	P	Interferon alpha-inducible protein 27-like protein 2A (Interferon-stimulated gene 12 protein) (ISG12)
ruditapes_lrc33855	aging	other biological processes	P	Interferon alpha-inducible protein 27-like protein 2A (Interferon-stimulated gene 12 protein) (ISG12)
ruditapes_lrc36580	neuropeptide signaling pathway	signal transduction	P	Prokineticin-2 (PK2)
ruditapes_c676	rhythmic process	other biological processes	P	Prokineticin-2 (PK2)
ruditapes_c676	neuropeptide signaling pathway	signal transduction	P	Prokineticin-2 (PK2)
ruditapes_lrc36580	rhythmic process	other biological processes	P	Prokineticin-2 (PK2)
ruditapes2_c3226	biological_process	other biological processes	P	CD109 antigen (GPI-anchored alpha-2 macroglobulin-related protein) (CD antigen CD109)
ruditapes2_c3226	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (GPI-anchored alpha-2 macroglobulin-related protein) (CD antigen CD109)
ruditapes2_c3226	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (GPI-anchored alpha-2 macroglobulin-related protein) (CD antigen CD109)
ruditapes_c2752	negative regulation of peptidase activity	other biological processes	P	CD109 antigen (GPI-anchored alpha-2 macroglobulin-related protein) (CD antigen CD109)
ruditapes_c2752	biological_process	other biological processes	P	CD109 antigen (GPI-anchored alpha-2 macroglobulin-related protein) (CD antigen CD109)
ruditapes_c2752	negative regulation of endopeptidase activity	other biological processes	P	CD109 antigen (GPI-anchored alpha-2 macroglobulin-related protein) (CD antigen CD109)
ruditapes_c9441	luteinization	developmental processes	P	Calpain-5 (EC 3.4.22.-)
ruditapes_c9441	granulosa cell differentiation	other biological processes	P	Calpain-5 (EC 3.4.22.-)
ruditapes_c9441	proteolysis	protein metabolism	P	Calpain-5 (EC 3.4.22.-)
ruditapes_c9441	ovarian follicle development	developmental processes	P	Calpain-5 (EC 3.4.22.-)
ruditapes2_c1726	endocytosis	transport	P	"Stabilin-2 (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 2) (FEEL-2) [Cleaved into: Short form stabilin-2]"
ruditapes2_c1726	endocytosis	cell organization and biogenesis	P	"Stabilin-2 (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 2) (FEEL-2) [Cleaved into: Short form stabilin-2]"
ruditapes2_c1726	cell adhesion	cell adhesion	P	"Stabilin-2 (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 2) (FEEL-2) [Cleaved into: Short form stabilin-2]"
ruditapes2_c1726	defense response to bacterium	stress response	P	"Stabilin-2 (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 2) (FEEL-2) [Cleaved into: Short form stabilin-2]"
ruditapes_c29007	inflammatory response	stress response	P	"Stabilin-1 (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 1) (FEEL-1)"
ruditapes_c29007	cell adhesion	cell adhesion	P	"Stabilin-1 (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 1) (FEEL-1)"
ruditapes_c29007	cell-cell signaling	cell-cell signaling	P	"Stabilin-1 (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 1) (FEEL-1)"
ruditapes_c29007	negative regulation of angiogenesis	developmental processes	P	"Stabilin-1 (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 1) (FEEL-1)"
ruditapes_c29007	defense response to bacterium	stress response	P	"Stabilin-1 (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 1) (FEEL-1)"
ruditapes_c25556	regulation of protein amino acid glycosylation	protein metabolism	P	Fukutin (EC 2.-.-.-)
ruditapes_c25556	neuron migration	developmental processes	P	Fukutin (EC 2.-.-.-)
ruditapes_c25556	negative regulation of JNK cascade	signal transduction	P	Fukutin (EC 2.-.-.-)
ruditapes_c25556	negative regulation of JNK cascade	stress response	P	Fukutin (EC 2.-.-.-)
ruditapes_c25556	negative regulation of cell proliferation	cell cycle and proliferation	P	Fukutin (EC 2.-.-.-)
ruditapes_lrc34775	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc fingers and homeoboxes protein 1
ruditapes_lrc34775	"transcription, DNA-dependent"	RNA metabolism	P	Zinc fingers and homeoboxes protein 1
ruditapes_lrc34775	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc fingers and homeoboxes protein 1
ruditapes_c10130	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc fingers and homeoboxes protein 1
ruditapes_c10130	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc fingers and homeoboxes protein 1
ruditapes_c10130	"transcription, DNA-dependent"	RNA metabolism	P	Zinc fingers and homeoboxes protein 1
ruditapes_lrc29541	purine nucleoside metabolic process	other metabolic processes	P	O-acetyl-ADP-ribose deacetylase 1 (EC 3.5.1.-)
ruditapes_c14317	protein deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (VHL-interacting deubiquitinating enzyme 1)
ruditapes_c14317	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (VHL-interacting deubiquitinating enzyme 1)
ruditapes_c14317	cell migration	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (VHL-interacting deubiquitinating enzyme 1)
ruditapes_c14317	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (VHL-interacting deubiquitinating enzyme 1)
ruditapes_c14317	regulation of G-protein coupled receptor protein signaling pathway	signal transduction	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (VHL-interacting deubiquitinating enzyme 1)
ruditapes_c14317	protein K63-linked deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (VHL-interacting deubiquitinating enzyme 1)
ruditapes_c14317	endocytosis	transport	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (VHL-interacting deubiquitinating enzyme 1)
ruditapes_c14317	endocytosis	cell organization and biogenesis	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (VHL-interacting deubiquitinating enzyme 1)
ruditapes_c14317	axon guidance	developmental processes	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (VHL-interacting deubiquitinating enzyme 1)
ruditapes_c14317	axon guidance	cell organization and biogenesis	P	Ubiquitin carboxyl-terminal hydrolase 33 (EC 3.4.19.12) (Deubiquitinating enzyme 33) (Ubiquitin thioesterase 33) (Ubiquitin-specific-processing protease 33) (VHL-interacting deubiquitinating enzyme 1)
ruditapes_c12556	protein amino acid phosphorylation	protein metabolism	P	Putative HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-)
ruditapes_c12556	regulation of carbohydrate metabolic process	other metabolic processes	P	Putative HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-)
ruditapes_c12556	two-component signal transduction system (phosphorelay)	signal transduction	P	Putative HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-)
ruditapes_c12556	phosphorylation	other metabolic processes	P	Putative HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-)
ruditapes_c12556	metabolic process	other metabolic processes	P	Putative HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-)
ruditapes_c22160	RNA methylation	RNA metabolism	P	Uncharacterized RNA methyltransferase FN1713 (EC 2.1.1.-)
ruditapes_c22160	methylation	other metabolic processes	P	Uncharacterized RNA methyltransferase FN1713 (EC 2.1.1.-)
ruditapes_c22160	RNA processing	RNA metabolism	P	Uncharacterized RNA methyltransferase FN1713 (EC 2.1.1.-)
ruditapes_c12881	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c12881	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c19034	thiamin biosynthetic process	other metabolic processes	P	Thiamine-phosphate synthase (TP synthase) (TPS) (EC 2.5.1.3) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
ruditapes_c21502	methylation	other metabolic processes	P	Uncharacterized RNA methyltransferase TTE1812 (EC 2.1.1.-)
ruditapes_c21502	RNA methylation	RNA metabolism	P	Uncharacterized RNA methyltransferase TTE1812 (EC 2.1.1.-)
ruditapes_c21502	RNA processing	RNA metabolism	P	Uncharacterized RNA methyltransferase TTE1812 (EC 2.1.1.-)
ruditapes_c30986	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c30986	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c30986	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c30986	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c30986	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c30986	cell division	other biological processes	P	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
ruditapes_c16431	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c16431	cellular amino acid metabolic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c16431	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase)
ruditapes_c20841	GTP catabolic process	other metabolic processes	P	Putative ribosome biogenesis GTPase RsgA (EC 3.6.1.-)
ruditapes_c15261	tRNA processing	RNA metabolism	P	tRNA-specific 2-thiouridylase MnmA 1 (EC 2.8.1.-)
ruditapes2_c1751	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes2_c1751	cellular amino acid biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c20459	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c20459	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c20459	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c20459	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c27560	regulation of cell shape	cell organization and biogenesis	P	Glutamate racemase 2 (EC 5.1.1.3)
ruditapes_c27560	metabolic process	other metabolic processes	P	Glutamate racemase 2 (EC 5.1.1.3)
ruditapes_c27560	cell wall organization	cell organization and biogenesis	P	Glutamate racemase 2 (EC 5.1.1.3)
ruditapes_c27560	peptidoglycan biosynthetic process	other metabolic processes	P	Glutamate racemase 2 (EC 5.1.1.3)
ruditapes_c27350	proteolysis	protein metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c27350	tRNA processing	RNA metabolism	P	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (t(6)A37 threonylcarbamoyladenosine biosynthesis protein)
ruditapes_c14817	leucine biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase 2 (EC 2.3.3.13) (Alpha-IPM synthase 2) (Alpha-isopropylmalate synthase 2)
ruditapes_c14817	cellular amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase 2 (EC 2.3.3.13) (Alpha-IPM synthase 2) (Alpha-isopropylmalate synthase 2)
ruditapes_c14817	cofactor biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase 2 (EC 2.3.3.13) (Alpha-IPM synthase 2) (Alpha-isopropylmalate synthase 2)
ruditapes_c14817	branched chain family amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase 2 (EC 2.3.3.13) (Alpha-IPM synthase 2) (Alpha-isopropylmalate synthase 2)
ruditapes_c14817	carboxylic acid metabolic process	other metabolic processes	P	2-isopropylmalate synthase 2 (EC 2.3.3.13) (Alpha-IPM synthase 2) (Alpha-isopropylmalate synthase 2)
ruditapes_c13821	cobalamin biosynthetic process	other metabolic processes	P	Cobalamin synthase (EC 2.-.-.-)
ruditapes_c19509	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c19509	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c19509	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes_c19509	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Alpha-IPM isomerase) (IPMI) (Isopropylmalate isomerase)
ruditapes2_c1999	translation	protein metabolism	P	50S ribosomal protein L27
ruditapes_c22652	metabolic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c22652	purine nucleotide biosynthetic process	other metabolic processes	P	Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (ATIC) (IMP synthase) (Inosinicase)]
ruditapes_c15081	coenzyme A biosynthetic process	other metabolic processes	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_c15081	phosphorylation	other metabolic processes	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_c15081	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Type III pantothenate kinase (EC 2.7.1.33) (PanK-III) (Pantothenic acid kinase)
ruditapes_c9209	biopolymer modification	other metabolic processes	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c9209	tRNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c9209	RNA modification	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c9209	tRNA processing	RNA metabolism	P	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC 2.-.-.-) (tRNA-i(6)A37 methylthiotransferase)
ruditapes_c8193	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c17797	translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c17797	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c17797	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c8193	tRNA aminoacylation for protein translation	protein metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes_c8193	tRNA aminoacylation for protein translation	RNA metabolism	P	Aspartate--tRNA ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)
ruditapes2_lrc3775	proteolysis	protein metabolism	P	Lipoprotein signal peptidase (EC 3.4.23.36) (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)
ruditapes_lrc15772	cell division	other biological processes	P	Putative septation protein SpoVG
ruditapes_lrc15772	cell cycle	cell cycle and proliferation	P	Putative septation protein SpoVG
ruditapes_lrc15772	barrier septum formation	cell organization and biogenesis	P	Putative septation protein SpoVG
ruditapes_lrc15772	sporulation resulting in formation of a cellular spore	other biological processes	P	Putative septation protein SpoVG
ruditapes_c18579	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimP
ruditapes2_c751	translation	protein metabolism	P	50S ribosomal protein L24
ruditapes_c7330	biological_process	other biological processes	P	Cytosolic sulfotransferase 4 (AtSOT4) (EC 2.8.2.-)
ruditapes_c18410	protein modification process	protein metabolism	P	E3 ubiquitin-protein ligase UPL6 (Ubiquitin-protein ligase 6) (EC 6.3.2.-)
ruditapes_c30854	transmembrane transport	transport	P	Probable cyclic nucleotide-gated ion channel 5 (AtCNGC5) (Cyclic nucleotide- and calmodulin-regulated ion channel 5)
ruditapes_c30854	ion transport	transport	P	Probable cyclic nucleotide-gated ion channel 5 (AtCNGC5) (Cyclic nucleotide- and calmodulin-regulated ion channel 5)
ruditapes_c30854	transport	transport	P	Probable cyclic nucleotide-gated ion channel 5 (AtCNGC5) (Cyclic nucleotide- and calmodulin-regulated ion channel 5)
ruditapes2_c3088	ATP hydrolysis coupled proton transport	transport	P	Vacuolar proton ATPase a1 (V-type proton ATPase 95 kDa subunit a isoform 1) (V-ATPase 95 kDa isoform a1) (Vacuolar proton pump subunit a1) (Vacuolar proton translocating ATPase 95 kDa subunit a isoform 1)
ruditapes_c19765	transport	transport	P	Probable peptide/nitrate transporter At1g72130
ruditapes_c19765	oligopeptide transport	transport	P	Probable peptide/nitrate transporter At1g72130
ruditapes_s35000	cell wall organization	cell organization and biogenesis	P	Cellulose synthase-like protein B3 (AtCslB3) (EC 2.4.1.-)
ruditapes_s35000	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase-like protein B3 (AtCslB3) (EC 2.4.1.-)
ruditapes_c18253	UTP biosynthetic process	other metabolic processes	P	"Nucleoside diphosphate kinase 4, chloroplastic (EC 2.7.4.6) (Nucleoside diphosphate kinase III) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV)"
ruditapes_c18253	phosphorylation	other metabolic processes	P	"Nucleoside diphosphate kinase 4, chloroplastic (EC 2.7.4.6) (Nucleoside diphosphate kinase III) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV)"
ruditapes_c18253	CTP biosynthetic process	other metabolic processes	P	"Nucleoside diphosphate kinase 4, chloroplastic (EC 2.7.4.6) (Nucleoside diphosphate kinase III) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV)"
ruditapes_c18253	nucleoside diphosphate phosphorylation	other metabolic processes	P	"Nucleoside diphosphate kinase 4, chloroplastic (EC 2.7.4.6) (Nucleoside diphosphate kinase III) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV)"
ruditapes_c18253	GTP biosynthetic process	other metabolic processes	P	"Nucleoside diphosphate kinase 4, chloroplastic (EC 2.7.4.6) (Nucleoside diphosphate kinase III) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV)"
ruditapes_c18253	nucleotide metabolic process	other metabolic processes	P	"Nucleoside diphosphate kinase 4, chloroplastic (EC 2.7.4.6) (Nucleoside diphosphate kinase III) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV)"
ruditapes_c24984	regulation of ARF GTPase activity	signal transduction	P	Probable ADP-ribosylation factor GTPase-activating protein AGD14 (ARF GAP AGD14) (Protein ARF-GAP DOMAIN 14) (AtAGD14) (Protein ZIGA4)
ruditapes_c24984	protein amino acid autophosphorylation	protein metabolism	P	Probable ADP-ribosylation factor GTPase-activating protein AGD14 (ARF GAP AGD14) (Protein ARF-GAP DOMAIN 14) (AtAGD14) (Protein ZIGA4)
ruditapes_c24984	positive regulation of GTPase activity	other biological processes	P	Probable ADP-ribosylation factor GTPase-activating protein AGD14 (ARF GAP AGD14) (Protein ARF-GAP DOMAIN 14) (AtAGD14) (Protein ZIGA4)
ruditapes_c26093	tRNA processing	RNA metabolism	P	tRNA wybutosine-synthesizing protein 1 homolog
ruditapes_c26093	oxidation reduction	other metabolic processes	P	tRNA wybutosine-synthesizing protein 1 homolog
ruditapes_c19606	response to DNA damage stimulus	stress response	P	"DNA repair protein recA homolog 2, mitochondrial (Recombinase A homolog 2)"
ruditapes_c19606	DNA recombination	DNA metabolism	P	"DNA repair protein recA homolog 2, mitochondrial (Recombinase A homolog 2)"
ruditapes_c19606	DNA metabolic process	DNA metabolism	P	"DNA repair protein recA homolog 2, mitochondrial (Recombinase A homolog 2)"
ruditapes_c19606	response to heat	stress response	P	"DNA repair protein recA homolog 2, mitochondrial (Recombinase A homolog 2)"
ruditapes_c19606	DNA repair	stress response	P	"DNA repair protein recA homolog 2, mitochondrial (Recombinase A homolog 2)"
ruditapes_c19606	DNA repair	DNA metabolism	P	"DNA repair protein recA homolog 2, mitochondrial (Recombinase A homolog 2)"
ruditapes_c19606	mitochondrial genome maintenance	cell organization and biogenesis	P	"DNA repair protein recA homolog 2, mitochondrial (Recombinase A homolog 2)"
ruditapes2_c2997	carbohydrate metabolic process	other metabolic processes	P	"Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic (EC 1.1.1.8)"
ruditapes2_c2997	glycerol-3-phosphate metabolic process	other metabolic processes	P	"Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic (EC 1.1.1.8)"
ruditapes2_c2997	oxidation reduction	other metabolic processes	P	"Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic (EC 1.1.1.8)"
ruditapes2_c2997	glycerol-3-phosphate catabolic process	other metabolic processes	P	"Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic (EC 1.1.1.8)"
ruditapes_c26419	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor NAI1 (Basic helix-loop-helix protein 20) (AtbHLH20) (bHLH 20) (Transcription factor EN 27) (bHLH transcription factor bHLH020)
ruditapes_c26419	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor NAI1 (Basic helix-loop-helix protein 20) (AtbHLH20) (bHLH 20) (Transcription factor EN 27) (bHLH transcription factor bHLH020)
ruditapes_c24041	biological_process	other biological processes	P	Golgin candidate 1 (AtGC1) (Golgin-84)
ruditapes_c22375	cyclic nucleotide biosynthetic process	other metabolic processes	P	Photoactivated adenylate cyclase subunit alpha (EC 4.6.1.1) (Photoactivated adenylyl cyclase subunit alpha)
ruditapes_c22375	cAMP biosynthetic process	other metabolic processes	P	Photoactivated adenylate cyclase subunit alpha (EC 4.6.1.1) (Photoactivated adenylyl cyclase subunit alpha)
ruditapes_c22375	blue light signaling pathway	signal transduction	P	Photoactivated adenylate cyclase subunit alpha (EC 4.6.1.1) (Photoactivated adenylyl cyclase subunit alpha)
ruditapes_c22375	response to stimulus	other biological processes	P	Photoactivated adenylate cyclase subunit alpha (EC 4.6.1.1) (Photoactivated adenylyl cyclase subunit alpha)
ruditapes_c22375	protein-chromophore linkage	protein metabolism	P	Photoactivated adenylate cyclase subunit alpha (EC 4.6.1.1) (Photoactivated adenylyl cyclase subunit alpha)
ruditapes_c21813	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit alpha (PEP) (EC 2.7.7.6) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha)
ruditapes_c31055	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c31055	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c12635	oxidation reduction	other metabolic processes	P	Lambda-crystallin homolog (EC 1.1.1.45) (L-gulonate 3-dehydrogenase) (Gul3DH)
ruditapes_c12635	fatty acid metabolic process	other metabolic processes	P	Lambda-crystallin homolog (EC 1.1.1.45) (L-gulonate 3-dehydrogenase) (Gul3DH)
ruditapes_c8475	cytoskeleton organization	cell organization and biogenesis	P	Gamma-sarcoglycan (Gamma-SG)
ruditapes_c19667	DNA repair	stress response	P	Histone H3-like protein
ruditapes_c19667	DNA repair	DNA metabolism	P	Histone H3-like protein
ruditapes_c19667	nucleosome assembly	cell organization and biogenesis	P	Histone H3-like protein
ruditapes_c19667	response to DNA damage stimulus	stress response	P	Histone H3-like protein
ruditapes_c10841	isoleucyl-tRNA aminoacylation	protein metabolism	P	"Probable isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c10841	isoleucyl-tRNA aminoacylation	RNA metabolism	P	"Probable isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c10841	translation	protein metabolism	P	"Probable isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c10841	tRNA aminoacylation for protein translation	protein metabolism	P	"Probable isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c10841	tRNA aminoacylation for protein translation	RNA metabolism	P	"Probable isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)"
ruditapes_c16477	phosphoinositide phosphorylation	other metabolic processes	P	Probable phosphatidylinositol 4-kinase STT4 homolog (PI4-kinase) (PtdIns-4-kinase) (EC 2.7.1.67)
ruditapes_c16477	phosphorylation	other metabolic processes	P	Probable phosphatidylinositol 4-kinase STT4 homolog (PI4-kinase) (PtdIns-4-kinase) (EC 2.7.1.67)
ruditapes_c16477	phosphoinositide-mediated signaling	signal transduction	P	Probable phosphatidylinositol 4-kinase STT4 homolog (PI4-kinase) (PtdIns-4-kinase) (EC 2.7.1.67)
ruditapes2_c3256	proteolysis	protein metabolism	P	Methionine aminopeptidase 2 (MAP-2) (MetAP 2) (EC 3.4.11.18) (Peptidase M 2)
ruditapes2_c3256	cellular process	other biological processes	P	Methionine aminopeptidase 2 (MAP-2) (MetAP 2) (EC 3.4.11.18) (Peptidase M 2)
ruditapes_c7041	methylation	other metabolic processes	P	mRNA cap guanine-N7 methyltransferase (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase) (mRNA cap methyltransferase)
ruditapes_c7041	mRNA processing	RNA metabolism	P	mRNA cap guanine-N7 methyltransferase (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase) (mRNA cap methyltransferase)
ruditapes_c7041	mRNA capping	RNA metabolism	P	mRNA cap guanine-N7 methyltransferase (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase) (mRNA cap methyltransferase)
ruditapes_c8044	methylation	other metabolic processes	P	mRNA cap guanine-N7 methyltransferase (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase) (mRNA cap methyltransferase)
ruditapes_c8044	mRNA processing	RNA metabolism	P	mRNA cap guanine-N7 methyltransferase (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase) (mRNA cap methyltransferase)
ruditapes_c8044	mRNA capping	RNA metabolism	P	mRNA cap guanine-N7 methyltransferase (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase) (mRNA cap methyltransferase)
ruditapes_c2831	DNA repair	stress response	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c2831	DNA repair	DNA metabolism	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c2831	response to DNA damage stimulus	stress response	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c2831	meiosis	cell cycle and proliferation	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c23832	protein amino acid phosphorylation	protein metabolism	P	Probable cAMP-dependent protein kinase catalytic subunit (EC 2.7.11.11)
ruditapes_c23832	phosphorylation	other metabolic processes	P	Probable cAMP-dependent protein kinase catalytic subunit (EC 2.7.11.11)
ruditapes_lrc34179	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Probable proteasome subunit beta type-7 (EC 3.4.25.1) (26S proteasome beta-type subunit PRE4) (Multicatalytic endopeptidase complex subunit PRE4)
ruditapes_lrc34179	proteolysis	protein metabolism	P	Probable proteasome subunit beta type-7 (EC 3.4.25.1) (26S proteasome beta-type subunit PRE4) (Multicatalytic endopeptidase complex subunit PRE4)
ruditapes_c4742	valyl-tRNA aminoacylation	RNA metabolism	P	"Probable valine--tRNA ligase, cytoplasmic (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)"
ruditapes_c4742	tRNA aminoacylation for protein translation	protein metabolism	P	"Probable valine--tRNA ligase, cytoplasmic (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)"
ruditapes_c4742	tRNA aminoacylation for protein translation	RNA metabolism	P	"Probable valine--tRNA ligase, cytoplasmic (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)"
ruditapes_c4742	valyl-tRNA aminoacylation	protein metabolism	P	"Probable valine--tRNA ligase, cytoplasmic (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)"
ruditapes_c4742	translation	protein metabolism	P	"Probable valine--tRNA ligase, cytoplasmic (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)"
ruditapes_c9528	negative regulation of cell proliferation	cell cycle and proliferation	P	Probable serine/threonine-protein kinase qkgA (EC 2.7.11.1) (Quick growth protein qkgA) (Ras of complex proteins and C-terminal of roc 2)
ruditapes_c9528	small GTPase mediated signal transduction	signal transduction	P	Probable serine/threonine-protein kinase qkgA (EC 2.7.11.1) (Quick growth protein qkgA) (Ras of complex proteins and C-terminal of roc 2)
ruditapes_c9528	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase qkgA (EC 2.7.11.1) (Quick growth protein qkgA) (Ras of complex proteins and C-terminal of roc 2)
ruditapes_c9528	GTP catabolic process	other metabolic processes	P	Probable serine/threonine-protein kinase qkgA (EC 2.7.11.1) (Quick growth protein qkgA) (Ras of complex proteins and C-terminal of roc 2)
ruditapes_c9528	negative regulation of aggregate size involved in sorocarp development	stress response	P	Probable serine/threonine-protein kinase qkgA (EC 2.7.11.1) (Quick growth protein qkgA) (Ras of complex proteins and C-terminal of roc 2)
ruditapes_c9528	negative regulation of aggregate size involved in sorocarp development	developmental processes	P	Probable serine/threonine-protein kinase qkgA (EC 2.7.11.1) (Quick growth protein qkgA) (Ras of complex proteins and C-terminal of roc 2)
ruditapes_c9528	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase qkgA (EC 2.7.11.1) (Quick growth protein qkgA) (Ras of complex proteins and C-terminal of roc 2)
ruditapes_c15780	signal transduction	signal transduction	P	Uncharacterized protein ECU09
ruditapes_c10025	sporulation resulting in formation of a cellular spore	other biological processes	P	Spore wall protein 7
ruditapes_c13342	protein amino acid phosphorylation	protein metabolism	P	Probable serine/threonine-protein kinase KIN1 homolog (EC 2.7.11.1)
ruditapes_c13342	exocytosis	transport	P	Probable serine/threonine-protein kinase KIN1 homolog (EC 2.7.11.1)
ruditapes_c13342	phosphorylation	other metabolic processes	P	Probable serine/threonine-protein kinase KIN1 homolog (EC 2.7.11.1)
ruditapes_c20908	protein amino acid adenylylation	protein metabolism	P	Adenosine monophosphate-protein transferase FICD homolog (EC 2.7.7.n1)
ruditapes_c31445	pupariation	developmental processes	P	Protein singed wings 2
ruditapes_c31445	response to ecdysone	developmental processes	P	Protein singed wings 2
ruditapes2_c6594	Golgi organization	cell organization and biogenesis	P	O-glucosyltransferase rumi (EC 2.4.1.-)
ruditapes2_c6594	negative regulation of Notch signaling pathway	signal transduction	P	O-glucosyltransferase rumi (EC 2.4.1.-)
ruditapes2_c6594	protein amino acid glycosylation in endoplasmic reticulum	protein metabolism	P	O-glucosyltransferase rumi (EC 2.4.1.-)
ruditapes2_c6594	Notch signaling pathway	signal transduction	P	O-glucosyltransferase rumi (EC 2.4.1.-)
ruditapes2_c545	phospholipid biosynthetic process	other metabolic processes	P	Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 4
ruditapes_c28136	DNA topological change	DNA metabolism	P	DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)
ruditapes_c29134	protein complex assembly	cell organization and biogenesis	P	Midasin (MIDAS-containing protein)
ruditapes_c29134	ATP catabolic process	other metabolic processes	P	Midasin (MIDAS-containing protein)
ruditapes_c18061	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 20 (ABC transporter ABCG.20)
ruditapes_c18061	transport	transport	P	ABC transporter G family member 20 (ABC transporter ABCG.20)
ruditapes2_lrc5314	sequestering of actin monomers	protein metabolism	P	Thymosin beta (Beta-thymosin)
ruditapes2_lrc5314	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes_lrc36587	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes_s39783	sequestering of actin monomers	protein metabolism	P	Thymosin beta (Beta-thymosin)
ruditapes_s39783	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes2_lrc5099	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes_lrc36763	sequestering of actin monomers	protein metabolism	P	Thymosin beta (Beta-thymosin)
ruditapes_lrc36763	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes_lrc36763	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes_s39783	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes_lrc36587	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes2_lrc5099	sequestering of actin monomers	protein metabolism	P	Thymosin beta (Beta-thymosin)
ruditapes2_lrc5099	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes_s39783	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes2_lrc5099	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes_lrc36763	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes2_lrc5314	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes2_lrc5314	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes_lrc36587	sequestering of actin monomers	protein metabolism	P	Thymosin beta (Beta-thymosin)
ruditapes_lrc36587	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta (Beta-thymosin)
ruditapes2_c1213	ATP catabolic process	other metabolic processes	P	ABC transporter A family member 2 (ABC transporter ABCA.2)
ruditapes2_c1213	transport	transport	P	ABC transporter A family member 2 (ABC transporter ABCA.2)
ruditapes_c20846	carbohydrate metabolic process	other metabolic processes	P	Putative malate dehydrogenase 1B (EC 1.1.1.-)
ruditapes_c20846	tricarboxylic acid cycle	other metabolic processes	P	Putative malate dehydrogenase 1B (EC 1.1.1.-)
ruditapes_c20846	cell redox homeostasis	other biological processes	P	Putative malate dehydrogenase 1B (EC 1.1.1.-)
ruditapes_c20846	oxidation reduction	other metabolic processes	P	Putative malate dehydrogenase 1B (EC 1.1.1.-)
ruditapes_c20846	malate metabolic process	other metabolic processes	P	Putative malate dehydrogenase 1B (EC 1.1.1.-)
ruditapes_c24427	chemotaxis	other biological processes	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	"G-protein signaling, coupled to cAMP nucleotide second messenger"	signal transduction	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	cell cycle	cell cycle and proliferation	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	dephosphorylation	other metabolic processes	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	actin filament organization	cell organization and biogenesis	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	regulation of pseudopodium assembly	cell organization and biogenesis	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	phosphoinositide-mediated signaling	signal transduction	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	aggregation involved in sorocarp development	stress response	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	aggregation involved in sorocarp development	developmental processes	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	establishment of cell polarity	cell organization and biogenesis	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	actin filament polymerization	cell organization and biogenesis	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	regulation of adenylate cyclase activity	other metabolic processes	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	regulation of cell morphogenesis	cell organization and biogenesis	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	lipid metabolic process	other metabolic processes	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	cell motion	other biological processes	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	protein amino acid dephosphorylation	protein metabolism	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	phosphoinositide dephosphorylation	other metabolic processes	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	positive regulation of cell motion	other biological processes	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c24427	negative chemotaxis	other biological processes	P	"Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (EC 3.1.3.16) (EC 3.1.3.48) (EC 3.1.3.67) (Pten 3-phosphoinositide phosphatase alpha)"
ruditapes_c15628	nucleosome disassembly	cell organization and biogenesis	P	SWI/SNF complex subunit SMARCC2 (BRG1-associated factor 170) (BAF170) (SWI/SNF complex 170 kDa subunit) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2)
ruditapes_c15628	nervous system development	developmental processes	P	SWI/SNF complex subunit SMARCC2 (BRG1-associated factor 170) (BAF170) (SWI/SNF complex 170 kDa subunit) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2)
ruditapes_c15628	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	SWI/SNF complex subunit SMARCC2 (BRG1-associated factor 170) (BAF170) (SWI/SNF complex 170 kDa subunit) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2)
ruditapes_c15628	chromatin remodeling	cell organization and biogenesis	P	SWI/SNF complex subunit SMARCC2 (BRG1-associated factor 170) (BAF170) (SWI/SNF complex 170 kDa subunit) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2)
ruditapes_c15628	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	SWI/SNF complex subunit SMARCC2 (BRG1-associated factor 170) (BAF170) (SWI/SNF complex 170 kDa subunit) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2)
ruditapes_c15628	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	SWI/SNF complex subunit SMARCC2 (BRG1-associated factor 170) (BAF170) (SWI/SNF complex 170 kDa subunit) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2)
ruditapes_c15628	"regulation of transcription, DNA-dependent"	RNA metabolism	P	SWI/SNF complex subunit SMARCC2 (BRG1-associated factor 170) (BAF170) (SWI/SNF complex 170 kDa subunit) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2)
ruditapes_c15628	"transcription, DNA-dependent"	RNA metabolism	P	SWI/SNF complex subunit SMARCC2 (BRG1-associated factor 170) (BAF170) (SWI/SNF complex 170 kDa subunit) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2)
ruditapes_c15628	chromatin modification	cell organization and biogenesis	P	SWI/SNF complex subunit SMARCC2 (BRG1-associated factor 170) (BAF170) (SWI/SNF complex 170 kDa subunit) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2)
ruditapes2_c2992	signal transduction	signal transduction	P	Stomatin-like protein 3 (SLP-3)
ruditapes_s37231	spermatogenesis	other biological processes	P	SUN domain-containing protein 5 (Sad1 and UNC84 domain-containing protein 5) (Sperm-associated antigen 4-like protein) (Testis and spermatogenesis-related gene 4 protein)
ruditapes_c13147	germ-line stem cell maintenance	other biological processes	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	spermatogenesis	other biological processes	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	oogenesis	other biological processes	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	gene silencing by RNA	other metabolic processes	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	cell differentiation	other biological processes	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	positive regulation of translation	protein metabolism	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	regulation of translation	protein metabolism	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	meiosis	cell cycle and proliferation	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	DNA methylation during gametogenesis	DNA metabolism	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	RNA 5'-end processing	RNA metabolism	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	meiotic prophase I	cell cycle and proliferation	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	multicellular organismal development	developmental processes	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c13147	piRNA metabolic process	RNA metabolism	P	Piwi-like protein 2 (Cancer/testis antigen 80) (CT80)
ruditapes_c28724	dendrite self-avoidance	other biological processes	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c28724	nervous system development	developmental processes	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c28724	brain development	developmental processes	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c28724	cell adhesion	cell adhesion	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c28724	central nervous system development	developmental processes	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c28724	dorsal/ventral pattern formation	developmental processes	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c28724	axonogenesis	developmental processes	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c28724	axonogenesis	cell organization and biogenesis	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c28724	cell fate determination	other biological processes	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c28724	embryonic skeletal system morphogenesis	developmental processes	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c28724	homophilic cell adhesion	cell adhesion	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c28724	negative regulation of cell adhesion	cell adhesion	P	Down syndrome cell adhesion molecule-like protein 1 (Down syndrome cell adhesion molecule 2)
ruditapes_c11655	cell differentiation	other biological processes	P	"Solute carrier family 2, facilitated glucose transporter member 14 (Glucose transporter type 14) (GLUT-14)"
ruditapes_c11655	transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 14 (Glucose transporter type 14) (GLUT-14)"
ruditapes_c11655	multicellular organismal development	developmental processes	P	"Solute carrier family 2, facilitated glucose transporter member 14 (Glucose transporter type 14) (GLUT-14)"
ruditapes_c11655	glucose transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 14 (Glucose transporter type 14) (GLUT-14)"
ruditapes_c11655	spermatogenesis	other biological processes	P	"Solute carrier family 2, facilitated glucose transporter member 14 (Glucose transporter type 14) (GLUT-14)"
ruditapes_c11655	carbohydrate transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 14 (Glucose transporter type 14) (GLUT-14)"
ruditapes_c11655	transmembrane transport	transport	P	"Solute carrier family 2, facilitated glucose transporter member 14 (Glucose transporter type 14) (GLUT-14)"
ruditapes_c18910	"transcription, DNA-dependent"	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 5 (CHD-5) (EC 3.6.4.12) (ATP-dependent helicase CHD5)
ruditapes_c18910	chromatin modification	cell organization and biogenesis	P	Chromodomain-helicase-DNA-binding protein 5 (CHD-5) (EC 3.6.4.12) (ATP-dependent helicase CHD5)
ruditapes_c18910	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 5 (CHD-5) (EC 3.6.4.12) (ATP-dependent helicase CHD5)
ruditapes2_c1420	cell adhesion	cell adhesion	P	Protocadherin Fat 3 (hFat3) (Cadherin family member 15) (FAT tumor suppressor homolog 3)
ruditapes_c2418	cell adhesion	cell adhesion	P	Protocadherin Fat 3 (hFat3) (Cadherin family member 15) (FAT tumor suppressor homolog 3)
ruditapes_c2418	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 3 (hFat3) (Cadherin family member 15) (FAT tumor suppressor homolog 3)
ruditapes2_c1420	multicellular organismal development	developmental processes	P	Protocadherin Fat 3 (hFat3) (Cadherin family member 15) (FAT tumor suppressor homolog 3)
ruditapes_c2418	multicellular organismal development	developmental processes	P	Protocadherin Fat 3 (hFat3) (Cadherin family member 15) (FAT tumor suppressor homolog 3)
ruditapes2_c1420	homophilic cell adhesion	cell adhesion	P	Protocadherin Fat 3 (hFat3) (Cadherin family member 15) (FAT tumor suppressor homolog 3)
ruditapes_c25051	spindle assembly	cell cycle and proliferation	P	Serine/threonine-protein kinase Nek7 (EC 2.7.11.1) (Never in mitosis A-related kinase 7) (NimA-related protein kinase 7)
ruditapes_c25051	spindle assembly	cell organization and biogenesis	P	Serine/threonine-protein kinase Nek7 (EC 2.7.11.1) (Never in mitosis A-related kinase 7) (NimA-related protein kinase 7)
ruditapes_c25051	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase Nek7 (EC 2.7.11.1) (Never in mitosis A-related kinase 7) (NimA-related protein kinase 7)
ruditapes_c25051	cytokinesis	other biological processes	P	Serine/threonine-protein kinase Nek7 (EC 2.7.11.1) (Never in mitosis A-related kinase 7) (NimA-related protein kinase 7)
ruditapes_c25051	regulation of mitotic cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase Nek7 (EC 2.7.11.1) (Never in mitosis A-related kinase 7) (NimA-related protein kinase 7)
ruditapes_c25051	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase Nek7 (EC 2.7.11.1) (Never in mitosis A-related kinase 7) (NimA-related protein kinase 7)
ruditapes_c15439	cell-cell adhesion	cell adhesion	P	Polycystic kidney disease protein 1-like 1 (PC1-like 1 protein) (Polycystin-1L1)
ruditapes_c26216	cell cycle	cell cycle and proliferation	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	heart development	developmental processes	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	regulation of autophagy	other metabolic processes	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	JNK cascade	signal transduction	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	JNK cascade	stress response	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	autophagic vacuole formation	stress response	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	negative regulation of apoptosis	death	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	"transcription, DNA-dependent"	RNA metabolism	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	positive regulation of protein amino acid phosphorylation	protein metabolism	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	positive regulation of cell size	other biological processes	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	autophagic vacuole formation	other metabolic processes	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	autophagic vacuole formation	cell organization and biogenesis	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	liver development	developmental processes	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c26216	autophagy	other metabolic processes	P	RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200)
ruditapes_c9507	proteolysis	protein metabolism	P	A disintegrin and metalloproteinase with thrombospondin motifs 16 (ADAM-TS 16) (ADAM-TS16) (ADAMTS-16) (EC 3.4.24.-)
ruditapes_c28676	proteolysis	protein metabolism	P	A disintegrin and metalloproteinase with thrombospondin motifs 15 (ADAM-TS 15) (ADAM-TS15) (ADAMTS-15) (EC 3.4.24.-)
ruditapes_c18094	ciliary or flagellar motility	other biological processes	P	"Dynein heavy chain 5, axonemal (Axonemal beta dynein heavy chain 5) (Ciliary dynein heavy chain 5)"
ruditapes_c7296	ciliary or flagellar motility	other biological processes	P	"Dynein heavy chain 5, axonemal (Axonemal beta dynein heavy chain 5) (Ciliary dynein heavy chain 5)"
ruditapes_c18094	biological_process	other biological processes	P	"Dynein heavy chain 5, axonemal (Axonemal beta dynein heavy chain 5) (Ciliary dynein heavy chain 5)"
ruditapes_c7296	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 5, axonemal (Axonemal beta dynein heavy chain 5) (Ciliary dynein heavy chain 5)"
ruditapes_c18094	metabolic process	other metabolic processes	P	"Dynein heavy chain 5, axonemal (Axonemal beta dynein heavy chain 5) (Ciliary dynein heavy chain 5)"
ruditapes_c18094	microtubule-based movement	other biological processes	P	"Dynein heavy chain 5, axonemal (Axonemal beta dynein heavy chain 5) (Ciliary dynein heavy chain 5)"
ruditapes_c7296	metabolic process	other metabolic processes	P	"Dynein heavy chain 5, axonemal (Axonemal beta dynein heavy chain 5) (Ciliary dynein heavy chain 5)"
ruditapes_c7296	microtubule-based movement	other biological processes	P	"Dynein heavy chain 5, axonemal (Axonemal beta dynein heavy chain 5) (Ciliary dynein heavy chain 5)"
ruditapes_c7296	biological_process	other biological processes	P	"Dynein heavy chain 5, axonemal (Axonemal beta dynein heavy chain 5) (Ciliary dynein heavy chain 5)"
ruditapes_c18094	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 5, axonemal (Axonemal beta dynein heavy chain 5) (Ciliary dynein heavy chain 5)"
ruditapes_c2326	rRNA catabolic process	RNA metabolism	P	DIS3-like exonuclease 1 (EC 3.1.13.-)
ruditapes_c7749	phospholipid transport	transport	P	Probable phospholipid-transporting ATPase IM (EC 3.6.3.1) (ATPase class I type 8B member 4)
ruditapes_c7749	cation transport	transport	P	Probable phospholipid-transporting ATPase IM (EC 3.6.3.1) (ATPase class I type 8B member 4)
ruditapes_c29866	response to unfolded protein	stress response	P	Transcriptional activator hac1
ruditapes_c29866	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator hac1
ruditapes_c29866	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional activator hac1
ruditapes_c11832	cell redox homeostasis	other biological processes	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 (EC 2.4.99.18) (Oligosaccharyl transferase 34 kDa subunit) (Oligosaccharyl transferase subunit OST3) (Oligosaccharyl transferase subunit gamma)
ruditapes_c11832	protein amino acid N-linked glycosylation	protein metabolism	P	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 (EC 2.4.99.18) (Oligosaccharyl transferase 34 kDa subunit) (Oligosaccharyl transferase subunit OST3) (Oligosaccharyl transferase subunit gamma)
ruditapes_lrc34585	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDP kinase) (EC 2.7.4.6) (AnNDK) (NDK)
ruditapes_lrc34585	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDP kinase) (EC 2.7.4.6) (AnNDK) (NDK)
ruditapes_lrc34585	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDP kinase) (EC 2.7.4.6) (AnNDK) (NDK)
ruditapes_lrc34585	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDP kinase) (EC 2.7.4.6) (AnNDK) (NDK)
ruditapes_lrc34585	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDP kinase) (EC 2.7.4.6) (AnNDK) (NDK)
ruditapes_lrc34585	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDP kinase) (EC 2.7.4.6) (AnNDK) (NDK)
ruditapes_c25470	protein amino acid phosphorylation	protein metabolism	P	Casein kinase II subunit alpha (CK II subunit alpha) (EC 2.7.11.1)
ruditapes_c25470	phosphorylation	other metabolic processes	P	Casein kinase II subunit alpha (CK II subunit alpha) (EC 2.7.11.1)
ruditapes_c30278	biological_process	other biological processes	P	Uncharacterized protein YOR161C-C
ruditapes_c10299	tRNA 5'-leader removal	RNA metabolism	P	Ribonuclease P protein component 4 (RNase P component 4) (EC 3.1.26.5)
ruditapes_c10299	tRNA processing	RNA metabolism	P	Ribonuclease P protein component 4 (RNase P component 4) (EC 3.1.26.5)
ruditapes2_lrc6590	ATP catabolic process	other metabolic processes	P	Energy-coupling factor transporter ATP-binding protein EcfA (ECF transporter A component EcfA) (EC 3.6.3.-)
ruditapes2_lrc6590	transport	transport	P	Energy-coupling factor transporter ATP-binding protein EcfA (ECF transporter A component EcfA) (EC 3.6.3.-)
ruditapes_lrc38603	transport	transport	P	Energy-coupling factor transporter ATP-binding protein EcfA (ECF transporter A component EcfA) (EC 3.6.3.-)
ruditapes_lrc38603	ATP catabolic process	other metabolic processes	P	Energy-coupling factor transporter ATP-binding protein EcfA (ECF transporter A component EcfA) (EC 3.6.3.-)
ruditapes_c22424	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor E (TFE) (TFIIE subunit alpha homolog) (Transcription initiation factor TFIIE)
ruditapes_c22424	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor E (TFE) (TFIIE subunit alpha homolog) (Transcription initiation factor TFIIE)
ruditapes_c10817	cobalamin biosynthetic process	other metabolic processes	P	Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) (CbiXS)
ruditapes_c2862	carboxylic acid metabolic process	other metabolic processes	P	Putative homocitrate synthase AksA (EC 2.3.3.14) ((R)-homo(2)citrate synthase) (EC 2.3.3.-) ((R)-homo(3)citrate synthase) (EC 2.3.3.-)
ruditapes_c6094	carboxylic acid metabolic process	other metabolic processes	P	Putative homocitrate synthase AksA (EC 2.3.3.14) ((R)-homo(2)citrate synthase) (EC 2.3.3.-) ((R)-homo(3)citrate synthase) (EC 2.3.3.-)
ruditapes_c25907	regulation of proteolysis	protein metabolism	P	Uncharacterized serpin-like protein MA
ruditapes_c25907	negative regulation of peptidase activity	other biological processes	P	Uncharacterized serpin-like protein MA
ruditapes_c25907	negative regulation of endopeptidase activity	other biological processes	P	Uncharacterized serpin-like protein MA
ruditapes_c20379	thiamin biosynthetic process	other metabolic processes	P	Probable tRNA sulfurtransferase (EC 2.8.1.4) (Sulfur carrier protein ThiS sulfurtransferase) (Thiamine biosynthesis protein ThiI) (tRNA 4-thiouridine synthase)
ruditapes_c27497	translation	protein metabolism	P	30S ribosomal protein S13
ruditapes_c27497	ribosome biogenesis	other biological processes	P	30S ribosomal protein S13
ruditapes_lrc28411	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc28411	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc31862	phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc31862	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc31862	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc28411	nucleotide phosphorylation	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc28411	nucleotide biosynthetic process	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_lrc31862	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase)
ruditapes_c26653	mismatch repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c26653	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes_c26653	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutS
ruditapes_c26653	DNA repair	stress response	P	DNA mismatch repair protein MutS
ruditapes_c26653	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes2_c2759	carbohydrate metabolic process	other metabolic processes	P	Uncharacterized glycosyltransferase MA
ruditapes2_c2759	lipid glycosylation	other metabolic processes	P	Uncharacterized glycosyltransferase MA
ruditapes2_c2759	metabolic process	other metabolic processes	P	Uncharacterized glycosyltransferase MA
ruditapes_c18916	translation	protein metabolism	P	30S ribosomal protein S2
ruditapes_c22636	translation	protein metabolism	P	30S ribosomal protein S4e
ruditapes_c22148	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c22148	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c22148	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c22148	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c20090	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit 1 (EC 4.2.1.33) (Alpha-IPM isomerase 1) (IPMI 1) (Isopropylmalate isomerase 1)
ruditapes_c20090	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit 1 (EC 4.2.1.33) (Alpha-IPM isomerase 1) (IPMI 1) (Isopropylmalate isomerase 1)
ruditapes_c20090	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit 1 (EC 4.2.1.33) (Alpha-IPM isomerase 1) (IPMI 1) (Isopropylmalate isomerase 1)
ruditapes_c20090	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase small subunit 1 (EC 4.2.1.33) (Alpha-IPM isomerase 1) (IPMI 1) (Isopropylmalate isomerase 1)
ruditapes_s39247	translational termination	protein metabolism	P	Peptide chain release factor subunit 1 (Translation termination factor aRF1)
ruditapes_s39247	translational termination	cell organization and biogenesis	P	Peptide chain release factor subunit 1 (Translation termination factor aRF1)
ruditapes_s39247	translation	protein metabolism	P	Peptide chain release factor subunit 1 (Translation termination factor aRF1)
ruditapes_c27144	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c27144	glutamine metabolic process	other metabolic processes	P	CTP synthase (EC 6.3.4.2) (CTP synthetase) (UTP--ammonia ligase)
ruditapes_c19068	translation	protein metabolism	P	50S ribosomal protein L35Ae
ruditapes_c19903	carbohydrate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c19903	glycerol metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c19903	phosphorylation	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c19903	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c12640	translation	protein metabolism	P	50S ribosomal protein L6
ruditapes_c19820	oxidation reduction	other metabolic processes	P	MEMO1 family protein PF1638
ruditapes_c19820	cellular aromatic compound metabolic process	other metabolic processes	P	MEMO1 family protein PF1638
ruditapes_c17887	DNA topological change	DNA metabolism	P	Type 2 DNA topoisomerase 6 subunit B (EC 5.99.1.3) (Type II DNA topoisomerase VI subunit B) (TopoVI-B)
ruditapes_c12268	GMP biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] subunit A (EC 6.3.5.2) (Glutamine amidotransferase)
ruditapes_c12268	purine nucleotide biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] subunit A (EC 6.3.5.2) (Glutamine amidotransferase)
ruditapes_c12268	glutamine metabolic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] subunit A (EC 6.3.5.2) (Glutamine amidotransferase)
ruditapes_c17745	threonine catabolic process	other metabolic processes	P	Probable L-threonine 3-dehydrogenase (EC 1.1.1.103)
ruditapes_c17745	oxidation reduction	other metabolic processes	P	Probable L-threonine 3-dehydrogenase (EC 1.1.1.103)
ruditapes_c23985	oxidation reduction	other metabolic processes	P	Sulfhydrogenase 1 subunit beta (EC 1.12.98.4) (Sulfhydrogenase I subunit beta) (Sulfur reductase subunit HydB)
ruditapes_c11132	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c11132	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c11132	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c11132	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c11132	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c18842	carbohydrate metabolic process	other metabolic processes	P	Probable phosphoglucosamine mutase (EC 5.4.2.10)
ruditapes_c1522	"transcription, DNA-dependent"	RNA metabolism	P	Putative transcriptional regulatory protein PF0535
ruditapes_c1522	transcription initiation	RNA metabolism	P	Putative transcriptional regulatory protein PF0535
ruditapes_c1522	transcription initiation	cell organization and biogenesis	P	Putative transcriptional regulatory protein PF0535
ruditapes_c1522	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative transcriptional regulatory protein PF0535
ruditapes_c8458	cobalamin biosynthetic process	other metabolic processes	P	UPF0284 protein PF0303
ruditapes_c15157	biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c15157	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c15157	cell division	other biological processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c15157	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c15157	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c15157	cell cycle	cell cycle and proliferation	P	UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)
ruditapes_c10859	protein modification process	protein metabolism	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes_c10859	lipoate biosynthetic process	other metabolic processes	P	Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)
ruditapes_c11203	tricarboxylic acid cycle	other metabolic processes	P	Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone])
ruditapes_c11203	oxidation reduction	other metabolic processes	P	Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone])
ruditapes_c22821	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c22821	metabolic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c22821	thiamin biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c22821	terpenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)
ruditapes_c1039	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c1039	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c1039	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_lrc22894	purine ribonucleoside monophosphate biosynthetic process	other metabolic processes	P	Adenine deaminase (ADE) (EC 3.5.4.2) (Adenine aminohydrolase) (AAH)
ruditapes_lrc22894	nucleotide metabolic process	other metabolic processes	P	Adenine deaminase (ADE) (EC 3.5.4.2) (Adenine aminohydrolase) (AAH)
ruditapes_c12815	elevation of cytosolic calcium ion concentration	other biological processes	P	Stromal cell-derived factor 1 (xSDF-1) (C-X-C motif chemokine 12)
ruditapes_c12815	mesoderm migration	developmental processes	P	Stromal cell-derived factor 1 (xSDF-1) (C-X-C motif chemokine 12)
ruditapes_c12815	immune response	other biological processes	P	Stromal cell-derived factor 1 (xSDF-1) (C-X-C motif chemokine 12)
ruditapes_c12815	multicellular organismal development	developmental processes	P	Stromal cell-derived factor 1 (xSDF-1) (C-X-C motif chemokine 12)
ruditapes_c12815	G-protein coupled receptor protein signaling pathway	signal transduction	P	Stromal cell-derived factor 1 (xSDF-1) (C-X-C motif chemokine 12)
ruditapes_c12815	gastrulation	developmental processes	P	Stromal cell-derived factor 1 (xSDF-1) (C-X-C motif chemokine 12)
ruditapes_c12815	chemotaxis	other biological processes	P	Stromal cell-derived factor 1 (xSDF-1) (C-X-C motif chemokine 12)
ruditapes_c12815	cell chemotaxis	other biological processes	P	Stromal cell-derived factor 1 (xSDF-1) (C-X-C motif chemokine 12)
ruditapes_c7544	ribosome biogenesis	other biological processes	P	Ribosome biogenesis protein BRX1 homolog (Brix domain-containing protein 2) (Bx24)
ruditapes_c20835	one-carbon compound metabolic process	other metabolic processes	P	Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase II) (Carbonic anhydrase II) (CA-II)
ruditapes_c31888	glucose homeostasis	other biological processes	P	Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosomal region candidate gene 1 protein homolog)
ruditapes_c31888	intracellular protein transport	transport	P	Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosomal region candidate gene 1 protein homolog)
ruditapes_c31888	regulation of glucose import	transport	P	Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosomal region candidate gene 1 protein homolog)
ruditapes_c28146	defense response	stress response	P	Sperm-associated antigen 11 (Antimicrobial-like protein Bin-1b)
ruditapes_c28146	defense response to bacterium	stress response	P	Sperm-associated antigen 11 (Antimicrobial-like protein Bin-1b)
ruditapes_c7437	biological_process	other biological processes	P	Ankyrin repeat and SOCS box protein 13 (ASB-13)
ruditapes_c21775	defense response to virus	stress response	P	C-type lectin domain family 4 member K (Langerin) (CD antigen CD207)
ruditapes_c27867	pseudouridine synthesis	RNA metabolism	P	RNA pseudouridylate synthase domain-containing protein 1 (Ribosomal large subunit pseudouridine synthase C-like protein)
ruditapes_c27867	biological_process	other biological processes	P	RNA pseudouridylate synthase domain-containing protein 1 (Ribosomal large subunit pseudouridine synthase C-like protein)
ruditapes_c27867	RNA modification	RNA metabolism	P	RNA pseudouridylate synthase domain-containing protein 1 (Ribosomal large subunit pseudouridine synthase C-like protein)
ruditapes_c27062	cell projection organization	cell organization and biogenesis	P	Tetratricopeptide repeat protein 8 (TPR repeat protein 8) (Bardet-Biedl syndrome 8 protein homolog)
ruditapes_c27062	fat cell differentiation	other biological processes	P	Tetratricopeptide repeat protein 8 (TPR repeat protein 8) (Bardet-Biedl syndrome 8 protein homolog)
ruditapes_c26444	GPI anchor biosynthetic process	protein metabolism	P	"Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase (EC 2.4.1.260) (Asparagine-linked glycosylation protein 12 homolog) (Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1,6-mannosyltransferase) (Mannosyltransferase ALG12 homolog)"
ruditapes_c8806	GPI anchor biosynthetic process	protein metabolism	P	"Alpha-1,2-mannosyltransferase ALG9 (EC 2.4.1.259) (EC 2.4.1.261) (Asparagine-linked glycosylation protein 9 homolog) (Disrupted in bipolar disorder protein 1 homolog) (Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase) (Dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase)"
ruditapes_c20047	negative regulation of striated muscle development	developmental processes	P	NAD-dependent protein deacetylase sirtuin-2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2) (mSIR2L2)
ruditapes_c20047	cell division	other biological processes	P	NAD-dependent protein deacetylase sirtuin-2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2) (mSIR2L2)
ruditapes_c20047	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2) (mSIR2L2)
ruditapes_c20047	cell cycle	cell cycle and proliferation	P	NAD-dependent protein deacetylase sirtuin-2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2) (mSIR2L2)
ruditapes_c20047	protein amino acid deacetylation	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2) (mSIR2L2)
ruditapes_c20047	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2) (mSIR2L2)
ruditapes_c20047	mitosis	cell cycle and proliferation	P	NAD-dependent protein deacetylase sirtuin-2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2) (mSIR2L2)
ruditapes_c20047	mitosis	cell organization and biogenesis	P	NAD-dependent protein deacetylase sirtuin-2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2) (mSIR2L2)
ruditapes_c20825	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromobox protein homolog 7
ruditapes_c20825	"transcription, DNA-dependent"	RNA metabolism	P	Chromobox protein homolog 7
ruditapes_c20825	chromatin modification	cell organization and biogenesis	P	Chromobox protein homolog 7
ruditapes_c20825	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Chromobox protein homolog 7
ruditapes_c8471	biological_process	other biological processes	P	Centrosomal protein CEP57L1 (Centrosomal protein 57kDa-like protein 1) (Centrosomal protein of 57 kDa-related protein) (Cep57R) (Cep57-related protein)
ruditapes_lrc9867	tRNA processing	RNA metabolism	P	Zinc phosphodiesterase ELAC protein 1 (EC 3.1.26.11) (ElaC homolog protein 1) (Ribonuclease Z 1) (RNase Z 1) (tRNA 3 endonuclease 1) (tRNase Z 1)
ruditapes_lrc9867	tRNA 3'-trailer cleavage	RNA metabolism	P	Zinc phosphodiesterase ELAC protein 1 (EC 3.1.26.11) (ElaC homolog protein 1) (Ribonuclease Z 1) (RNase Z 1) (tRNA 3 endonuclease 1) (tRNase Z 1)
ruditapes2_c3397	transport	transport	P	"Phosphate carrier protein, mitochondrial (Phosphate transport protein) (PTP) (Solute carrier family 25 member 3)"
ruditapes_lrc34438	transport	transport	P	"Phosphate carrier protein, mitochondrial (Phosphate transport protein) (PTP) (Solute carrier family 25 member 3)"
ruditapes2_c4432	transport	transport	P	"Phosphate carrier protein, mitochondrial (Phosphate transport protein) (PTP) (Solute carrier family 25 member 3)"
ruditapes_lrc35398	transport	transport	P	"Phosphate carrier protein, mitochondrial (Phosphate transport protein) (PTP) (Solute carrier family 25 member 3)"
ruditapes_lrc34296	transport	transport	P	"Phosphate carrier protein, mitochondrial (Phosphate transport protein) (PTP) (Solute carrier family 25 member 3)"
ruditapes_c15307	one-carbon compound metabolic process	other metabolic processes	P	Carbonic anhydrase 9 (EC 4.2.1.1) (Carbonate dehydratase IX) (Carbonic anhydrase IX) (CA-IX) (CAIX) (Membrane antigen MN homolog)
ruditapes_c15307	secretion	transport	P	Carbonic anhydrase 9 (EC 4.2.1.1) (Carbonate dehydratase IX) (Carbonic anhydrase IX) (CA-IX) (CAIX) (Membrane antigen MN homolog)
ruditapes_c15307	morphogenesis of an epithelium	developmental processes	P	Carbonic anhydrase 9 (EC 4.2.1.1) (Carbonate dehydratase IX) (Carbonic anhydrase IX) (CA-IX) (CAIX) (Membrane antigen MN homolog)
ruditapes_c19477	retinal bipolar neuron differentiation	developmental processes	P	Calcium-binding protein 4 (CaBP4)
ruditapes_c19477	visual perception	other biological processes	P	Calcium-binding protein 4 (CaBP4)
ruditapes_c19477	phototransduction	other biological processes	P	Calcium-binding protein 4 (CaBP4)
ruditapes_c19477	retinal cone cell development	developmental processes	P	Calcium-binding protein 4 (CaBP4)
ruditapes_c19477	photoreceptor cell morphogenesis	developmental processes	P	Calcium-binding protein 4 (CaBP4)
ruditapes_c19477	photoreceptor cell morphogenesis	cell organization and biogenesis	P	Calcium-binding protein 4 (CaBP4)
ruditapes_c7386	intracellular protein transport	transport	P	Selenoprotein S (SelS) (Sg2) (VCP-interacting membrane protein)
ruditapes_c32026	protein transport	transport	P	Importin-4 (Imp4) (Importin-4a) (Imp4a) (Ran-binding protein 4) (RanBP4)
ruditapes_c32026	intracellular protein transport	transport	P	Importin-4 (Imp4) (Importin-4a) (Imp4a) (Ran-binding protein 4) (RanBP4)
ruditapes_c32026	transport	transport	P	Importin-4 (Imp4) (Importin-4a) (Imp4a) (Ran-binding protein 4) (RanBP4)
ruditapes_c29673	protein transport	transport	P	Selenium-binding protein 1 (56 kDa selenium-binding protein) (SBP56) (SP56) (Selenium-binding protein 2)
ruditapes_c29673	transport	transport	P	Selenium-binding protein 1 (56 kDa selenium-binding protein) (SBP56) (SP56) (Selenium-binding protein 2)
ruditapes_c4700	negative regulation of peptidase activity	other biological processes	P	Cystatin-14 (Cystatin SC)
ruditapes_c1531	"transcription, DNA-dependent"	RNA metabolism	P	"Splicing factor, proline- and glutamine-rich (DNA-binding p52/p100 complex, 100 kDa subunit) (Polypyrimidine tract-binding protein-associated-splicing factor) (PSF) (PTB-associated-splicing factor)"
ruditapes_c1531	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Splicing factor, proline- and glutamine-rich (DNA-binding p52/p100 complex, 100 kDa subunit) (Polypyrimidine tract-binding protein-associated-splicing factor) (PSF) (PTB-associated-splicing factor)"
ruditapes_c1531	DNA repair	stress response	P	"Splicing factor, proline- and glutamine-rich (DNA-binding p52/p100 complex, 100 kDa subunit) (Polypyrimidine tract-binding protein-associated-splicing factor) (PSF) (PTB-associated-splicing factor)"
ruditapes_c1531	DNA repair	DNA metabolism	P	"Splicing factor, proline- and glutamine-rich (DNA-binding p52/p100 complex, 100 kDa subunit) (Polypyrimidine tract-binding protein-associated-splicing factor) (PSF) (PTB-associated-splicing factor)"
ruditapes_c1531	mRNA processing	RNA metabolism	P	"Splicing factor, proline- and glutamine-rich (DNA-binding p52/p100 complex, 100 kDa subunit) (Polypyrimidine tract-binding protein-associated-splicing factor) (PSF) (PTB-associated-splicing factor)"
ruditapes_c1531	response to DNA damage stimulus	stress response	P	"Splicing factor, proline- and glutamine-rich (DNA-binding p52/p100 complex, 100 kDa subunit) (Polypyrimidine tract-binding protein-associated-splicing factor) (PSF) (PTB-associated-splicing factor)"
ruditapes_c1531	"alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	"Splicing factor, proline- and glutamine-rich (DNA-binding p52/p100 complex, 100 kDa subunit) (Polypyrimidine tract-binding protein-associated-splicing factor) (PSF) (PTB-associated-splicing factor)"
ruditapes_c1531	RNA splicing	RNA metabolism	P	"Splicing factor, proline- and glutamine-rich (DNA-binding p52/p100 complex, 100 kDa subunit) (Polypyrimidine tract-binding protein-associated-splicing factor) (PSF) (PTB-associated-splicing factor)"
ruditapes_c18239	two-component signal transduction system (phosphorelay)	signal transduction	P	Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon (EC 3.1.1.61)
ruditapes_c18239	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon (EC 3.1.1.61)
ruditapes_c18239	chemotaxis	other biological processes	P	Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon (EC 3.1.1.61)
ruditapes_c27005	proteolysis	protein metabolism	P	Serine protease SepA autotransporter (EC 3.4.21.-) [Cleaved into: Serine protease SepA; Serine protease SepA translocator]
ruditapes_c27005	pathogenesis	other biological processes	P	Serine protease SepA autotransporter (EC 3.4.21.-) [Cleaved into: Serine protease SepA; Serine protease SepA translocator]
ruditapes_c21700	positive regulation of growth	other biological processes	P	Protein MEI2-like 5 (AML5) (MEI2-like protein 5)
ruditapes_c21700	meiosis	cell cycle and proliferation	P	Protein MEI2-like 5 (AML5) (MEI2-like protein 5)
ruditapes_c21700	positive regulation of meiosis	cell cycle and proliferation	P	Protein MEI2-like 5 (AML5) (MEI2-like protein 5)
ruditapes2_c1481	electron transport chain	other metabolic processes	P	"Ferric reduction oxidase 8, mitochondrial (AtFRO8) (EC 1.16.1.7) (Ferric-chelate reductase 8)"
ruditapes2_c1481	oxidation reduction	other metabolic processes	P	"Ferric reduction oxidase 8, mitochondrial (AtFRO8) (EC 1.16.1.7) (Ferric-chelate reductase 8)"
ruditapes2_c1481	ion transport	transport	P	"Ferric reduction oxidase 8, mitochondrial (AtFRO8) (EC 1.16.1.7) (Ferric-chelate reductase 8)"
ruditapes2_c1481	transport	transport	P	"Ferric reduction oxidase 8, mitochondrial (AtFRO8) (EC 1.16.1.7) (Ferric-chelate reductase 8)"
ruditapes_c27410	biological_process	other biological processes	P	"Nudix hydrolase 21, chloroplastic (AtNUDT21) (EC 3.6.1.-)"
ruditapes_c7540	biological_process	other biological processes	P	Putative BPI/LBP family protein At3g20270
ruditapes2_c6543	metabolic process	other metabolic processes	P	Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1 (EC 3.1.1.n2) (Isoprenylcysteine methylesterase-like protein 1)
ruditapes_c32385	metabolic process	other metabolic processes	P	Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1 (EC 3.1.1.n2) (Isoprenylcysteine methylesterase-like protein 1)
ruditapes_s36427	metabolic process	other metabolic processes	P	Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1 (EC 3.1.1.n2) (Isoprenylcysteine methylesterase-like protein 1)
ruditapes_c28285	cell wall organization	cell organization and biogenesis	P	Cellulose synthase-like protein G2 (AtCslG2) (EC 2.4.1.-)
ruditapes_c28285	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase-like protein G2 (AtCslG2) (EC 2.4.1.-)
ruditapes2_c2498	glutathione catabolic process	other metabolic processes	P	Gamma-glutamyltranspeptidase 1 (EC 2.3.2.2) (Gamma-glutamyltransferase 1) (Glutathione hydrolase 1) (EC 3.4.19.13)
ruditapes2_c2498	response to oxidative stress	stress response	P	Gamma-glutamyltranspeptidase 1 (EC 2.3.2.2) (Gamma-glutamyltransferase 1) (Glutathione hydrolase 1) (EC 3.4.19.13)
ruditapes2_c2357	carbohydrate metabolic process	other metabolic processes	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c2357	sucrose catabolic process	other metabolic processes	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c712	starch catabolic process	other metabolic processes	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c712	secretion by cell	transport	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c712	response to gibberellin stimulus	other biological processes	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c2357	response to gibberellin stimulus	other biological processes	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c2357	secretion by cell	transport	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c2357	response to abscisic acid stimulus	other biological processes	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c2357	starch catabolic process	other metabolic processes	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c712	carbohydrate metabolic process	other metabolic processes	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c712	response to abscisic acid stimulus	other biological processes	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes2_c712	sucrose catabolic process	other metabolic processes	P	"Alpha-amylase 1 (AtAMY1) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c27809	oxidation reduction	other metabolic processes	P	Indole-3-pyruvate monooxygenase YUCCA6 (EC 1.14.13.168) (Flavin-containing monooxygenase YUCCA6) (Protein HYPERTALL1)
ruditapes_c27809	auxin biosynthetic process	other metabolic processes	P	Indole-3-pyruvate monooxygenase YUCCA6 (EC 1.14.13.168) (Flavin-containing monooxygenase YUCCA6) (Protein HYPERTALL1)
ruditapes_c8523	lignin catabolic process	other metabolic processes	P	Laccase-11 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 11) (Diphenol oxidase 11) (Urishiol oxidase 11)
ruditapes_c8523	oxidation reduction	other metabolic processes	P	Laccase-11 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 11) (Diphenol oxidase 11) (Urishiol oxidase 11)
ruditapes_c23553	lignin catabolic process	other metabolic processes	P	Laccase-11 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 11) (Diphenol oxidase 11) (Urishiol oxidase 11)
ruditapes_c23553	oxidation reduction	other metabolic processes	P	Laccase-11 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 11) (Diphenol oxidase 11) (Urishiol oxidase 11)
ruditapes_c19791	transport	transport	P	"Solute carrier family 40 member 3, chloroplastic (Ferroportin-3) (Iron-regulated transporter 3) (AtIREG3) (Protein MULTIPLE ANTIBIOTIC RESISTANCE 1)"
ruditapes_c19791	transmembrane iron ion transport	transport	P	"Solute carrier family 40 member 3, chloroplastic (Ferroportin-3) (Iron-regulated transporter 3) (AtIREG3) (Protein MULTIPLE ANTIBIOTIC RESISTANCE 1)"
ruditapes_c19791	cellular iron ion homeostasis	other biological processes	P	"Solute carrier family 40 member 3, chloroplastic (Ferroportin-3) (Iron-regulated transporter 3) (AtIREG3) (Protein MULTIPLE ANTIBIOTIC RESISTANCE 1)"
ruditapes_c24312	oxidation reduction	other metabolic processes	P	Taxane 13-alpha-hydroxylase (EC 1.14.13.77) (Cytochrome P450 725A2)
ruditapes_c24312	paclitaxel biosynthetic process	other metabolic processes	P	Taxane 13-alpha-hydroxylase (EC 1.14.13.77) (Cytochrome P450 725A2)
ruditapes_c18779	"red, far-red light phototransduction"	other biological processes	P	COP9 signalosome complex subunit 3 (Signalosome subunit 3) (Protein FUSCA 11)
ruditapes_c18779	red or far red light signaling pathway	signal transduction	P	COP9 signalosome complex subunit 3 (Signalosome subunit 3) (Protein FUSCA 11)
ruditapes_c18779	G2 phase of mitotic cell cycle	cell cycle and proliferation	P	COP9 signalosome complex subunit 3 (Signalosome subunit 3) (Protein FUSCA 11)
ruditapes_c18779	cullin deneddylation	protein metabolism	P	COP9 signalosome complex subunit 3 (Signalosome subunit 3) (Protein FUSCA 11)
ruditapes_c18779	multicellular organismal development	developmental processes	P	COP9 signalosome complex subunit 3 (Signalosome subunit 3) (Protein FUSCA 11)
ruditapes_c4316	transport	transport	P	"NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 6) (NADH-plastoquinone oxidoreductase subunit 6)"
ruditapes_c4316	oxidation reduction	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 6) (NADH-plastoquinone oxidoreductase subunit 6)"
ruditapes_c25298	translation	protein metabolism	P	"30S ribosomal protein S8, chloroplastic"
ruditapes_c9838	copper ion homeostasis	other biological processes	P	COMM domain-containing protein 1 (Protein Murr1)
ruditapes_c9838	positive regulation of protein ubiquitination	protein metabolism	P	COMM domain-containing protein 1 (Protein Murr1)
ruditapes_c9838	regulation of proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	COMM domain-containing protein 1 (Protein Murr1)
ruditapes_c9838	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	COMM domain-containing protein 1 (Protein Murr1)
ruditapes_c26320	synaptogenesis	developmental processes	P	Neuroligin-3 (Gliotactin homolog) (Fragment)
ruditapes_c26320	synaptogenesis	cell organization and biogenesis	P	Neuroligin-3 (Gliotactin homolog) (Fragment)
ruditapes_c26320	cell adhesion	cell adhesion	P	Neuroligin-3 (Gliotactin homolog) (Fragment)
ruditapes_c8020	fatty acid metabolic process	other metabolic processes	P	Group XV phospholipase A2 (EC 2.3.1.-) (1-O-acylceramide synthase) (ACS) (LCAT-like lysophospholipase) (LLPL) (Lysophospholipase 3) (Lysosomal phospholipase A2) (LPLA2)
ruditapes_c8020	lipid metabolic process	other metabolic processes	P	Group XV phospholipase A2 (EC 2.3.1.-) (1-O-acylceramide synthase) (ACS) (LCAT-like lysophospholipase) (LLPL) (Lysophospholipase 3) (Lysosomal phospholipase A2) (LPLA2)
ruditapes_c8020	ceramide metabolic process	other metabolic processes	P	Group XV phospholipase A2 (EC 2.3.1.-) (1-O-acylceramide synthase) (ACS) (LCAT-like lysophospholipase) (LLPL) (Lysophospholipase 3) (Lysosomal phospholipase A2) (LPLA2)
ruditapes_c17178	carbohydrate metabolic process	other metabolic processes	P	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit (PP-1A) (EC 3.1.3.16)
ruditapes_c17178	glycogen metabolic process	other metabolic processes	P	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit (PP-1A) (EC 3.1.3.16)
ruditapes_c17178	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit (PP-1A) (EC 3.1.3.16)
ruditapes_c17178	cell division	other biological processes	P	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit (PP-1A) (EC 3.1.3.16)
ruditapes_c17178	lung development	developmental processes	P	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit (PP-1A) (EC 3.1.3.16)
ruditapes_c17178	protein amino acid dephosphorylation	protein metabolism	P	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit (PP-1A) (EC 3.1.3.16)
ruditapes_c17178	branching morphogenesis of a tube	developmental processes	P	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit (PP-1A) (EC 3.1.3.16)
ruditapes_lrc36101	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	response to gamma radiation	other biological processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	peptidyl-serine phosphorylation	protein metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	pro-B cell differentiation	developmental processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	DNA recombination	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	cellular response to insulin stimulus	other biological processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	somitogenesis	developmental processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	germ cell programmed cell death	death	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	double-strand break repair via nonhomologous end joining	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	double-strand break repair via nonhomologous end joining	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	heart development	developmental processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	response to DNA damage stimulus	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	T cell differentiation in the thymus	developmental processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	T cell receptor V(D)J recombination	developmental processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	T cell receptor V(D)J recombination	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	B cell lineage commitment	developmental processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	brain development	developmental processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	phosphorylation	other metabolic processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	immunoglobulin V(D)J recombination	developmental processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	immunoglobulin V(D)J recombination	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	T cell lineage commitment	developmental processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	telomere maintenance	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	telomere maintenance	cell organization and biogenesis	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	apoptosis	death	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	double-strand break repair	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	double-strand break repair	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	lymphocyte differentiation	developmental processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	DNA repair	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	DNA repair	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	positive regulation of apoptosis	death	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_lrc36101	protein destabilization	protein metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c1676	negative regulation of translation	protein metabolism	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	activation of phospholipase C activity	other biological processes	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	response to hypoxia	stress response	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	actin filament polymerization	cell organization and biogenesis	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	rRNA transcription	RNA metabolism	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	positive regulation of protein secretion	transport	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	positive regulation of endothelial cell proliferation	cell cycle and proliferation	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	angiogenesis	developmental processes	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	diacylglycerol biosynthetic process	other metabolic processes	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	negative regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	cell differentiation	other biological processes	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	activation of phospholipase A2 activity	other biological processes	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c1676	multicellular organismal development	developmental processes	P	Angiogenin (EC 3.1.27.-) (Ribonuclease 5) (RNase 5)
ruditapes_c29471	signal transduction	signal transduction	P	Vomeronasal type-1 receptor 1 (V1r-like receptor 1)
ruditapes_c29471	response to pheromone	other biological processes	P	Vomeronasal type-1 receptor 1 (V1r-like receptor 1)
ruditapes_c29471	G-protein coupled receptor protein signaling pathway	signal transduction	P	Vomeronasal type-1 receptor 1 (V1r-like receptor 1)
ruditapes_c28555	calcium ion transport	transport	P	"Inositol 1,4,5-trisphosphate receptor type 3 (IP3 receptor isoform 3) (IP3R 3) (InsP3R3) (Type 3 inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor)"
ruditapes_c28555	transport	transport	P	"Inositol 1,4,5-trisphosphate receptor type 3 (IP3 receptor isoform 3) (IP3R 3) (InsP3R3) (Type 3 inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor)"
ruditapes_c28555	ion transport	transport	P	"Inositol 1,4,5-trisphosphate receptor type 3 (IP3 receptor isoform 3) (IP3R 3) (InsP3R3) (Type 3 inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor)"
ruditapes_c28555	transmembrane transport	transport	P	"Inositol 1,4,5-trisphosphate receptor type 3 (IP3 receptor isoform 3) (IP3R 3) (InsP3R3) (Type 3 inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor)"
ruditapes_c28555	calcium ion transport into cytosol	transport	P	"Inositol 1,4,5-trisphosphate receptor type 3 (IP3 receptor isoform 3) (IP3R 3) (InsP3R3) (Type 3 inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor)"
ruditapes_c28555	transmembrane calcium ion transport	transport	P	"Inositol 1,4,5-trisphosphate receptor type 3 (IP3 receptor isoform 3) (IP3R 3) (InsP3R3) (Type 3 inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor)"
ruditapes_c28555	inositol phosphate-mediated signaling	signal transduction	P	"Inositol 1,4,5-trisphosphate receptor type 3 (IP3 receptor isoform 3) (IP3R 3) (InsP3R3) (Type 3 inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor)"
ruditapes_c18590	carbohydrate metabolic process	other metabolic processes	P	"Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78) (Beta-mannanase) (Endo-beta-1,4-mannanase) (ManA)"
ruditapes2_c2545	carbohydrate metabolic process	other metabolic processes	P	"Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78) (Beta-mannanase) (Endo-beta-1,4-mannanase) (ManA)"
ruditapes2_c2545	mannan catabolic process	other metabolic processes	P	"Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78) (Beta-mannanase) (Endo-beta-1,4-mannanase) (ManA)"
ruditapes_c18590	metabolic process	other metabolic processes	P	"Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78) (Beta-mannanase) (Endo-beta-1,4-mannanase) (ManA)"
ruditapes_c18590	mannan catabolic process	other metabolic processes	P	"Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78) (Beta-mannanase) (Endo-beta-1,4-mannanase) (ManA)"
ruditapes2_c2545	metabolic process	other metabolic processes	P	"Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78) (Beta-mannanase) (Endo-beta-1,4-mannanase) (ManA)"
ruditapes_c26571	pyridoxal phosphate biosynthetic process	other metabolic processes	P	Probable pyridoxine biosynthesis SNZERR (Ethylene response protein) (PDX1 homolog)
ruditapes_c26571	pyridoxine biosynthetic process	other metabolic processes	P	Probable pyridoxine biosynthesis SNZERR (Ethylene response protein) (PDX1 homolog)
ruditapes_c26571	metabolic process	other metabolic processes	P	Probable pyridoxine biosynthesis SNZERR (Ethylene response protein) (PDX1 homolog)
ruditapes2_c97	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain (allergen Lep d ?)
ruditapes2_c97	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain (allergen Lep d ?)
ruditapes2_c97	microtubule-based movement	other biological processes	P	Tubulin alpha chain (allergen Lep d ?)
ruditapes2_c97	microtubule-based process	other biological processes	P	Tubulin alpha chain (allergen Lep d ?)
ruditapes_c6550	JNK cascade	signal transduction	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_c6550	JNK cascade	stress response	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_c6550	protein amino acid phosphorylation	protein metabolism	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_lrc34225	vesicle transport along actin filament	transport	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_c6550	response to heat	stress response	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_c6550	determination of adult life span	developmental processes	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_lrc34225	JUN phosphorylation	signal transduction	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_lrc34225	JUN phosphorylation	stress response	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_lrc34225	JUN phosphorylation	protein metabolism	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_c6550	phosphorylation	other metabolic processes	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_lrc34225	response to heat	stress response	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_c6550	vesicle transport along actin filament	transport	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_lrc34225	protein amino acid phosphorylation	protein metabolism	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_lrc34225	JNK cascade	signal transduction	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_lrc34225	JNK cascade	stress response	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_c6550	JUN phosphorylation	signal transduction	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_c6550	JUN phosphorylation	stress response	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_c6550	JUN phosphorylation	protein metabolism	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_lrc34225	phosphorylation	other metabolic processes	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_lrc34225	determination of adult life span	developmental processes	P	Stress-activated protein kinase jnk-1 (EC 2.7.11.24)
ruditapes_lrc33842	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc36069	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc38878	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc39279	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes2_lrc4262	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_s39544	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_s35138	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes2_lrc4756	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes2_lrc5194	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc32680	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes2_lrc4656	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc38534	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc32768	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_c22668	sensory perception of smell	other biological processes	P	Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 (EC 2.7.12.1) (Dual specificity Yak1-related kinase mbk-1) (Minibrain Kinase 1)
ruditapes_c22668	positive regulation of growth rate	other biological processes	P	Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 (EC 2.7.12.1) (Dual specificity Yak1-related kinase mbk-1) (Minibrain Kinase 1)
ruditapes_c22668	protein amino acid phosphorylation	protein metabolism	P	Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 (EC 2.7.12.1) (Dual specificity Yak1-related kinase mbk-1) (Minibrain Kinase 1)
ruditapes_c22668	phosphorylation	other metabolic processes	P	Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 (EC 2.7.12.1) (Dual specificity Yak1-related kinase mbk-1) (Minibrain Kinase 1)
ruditapes_c22668	locomotion	other biological processes	P	Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 (EC 2.7.12.1) (Dual specificity Yak1-related kinase mbk-1) (Minibrain Kinase 1)
ruditapes_c22668	response to stimulus	other biological processes	P	Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 (EC 2.7.12.1) (Dual specificity Yak1-related kinase mbk-1) (Minibrain Kinase 1)
ruditapes_lrc38273	translation	protein metabolism	P	60S ribosomal protein L32 (Ribosomal protein 49)
ruditapes_c33415	cell-cell adhesion	cell adhesion	P	Countin-2
ruditapes_c33415	aggregation involved in sorocarp development	stress response	P	Countin-2
ruditapes_c33415	aggregation involved in sorocarp development	developmental processes	P	Countin-2
ruditapes_s38553	mRNA processing	RNA metabolism	P	Zinc finger protein 473 (Zinc finger protein 100 homolog) (Zfp-100)
ruditapes_s38553	gene expression	other metabolic processes	P	Zinc finger protein 473 (Zinc finger protein 100 homolog) (Zfp-100)
ruditapes_s38553	transcription from RNA polymerase II promoter	RNA metabolism	P	Zinc finger protein 473 (Zinc finger protein 100 homolog) (Zfp-100)
ruditapes_s38553	histone mRNA metabolic process	RNA metabolism	P	Zinc finger protein 473 (Zinc finger protein 100 homolog) (Zfp-100)
ruditapes_s38553	histone mRNA 3'-end processing	RNA metabolism	P	Zinc finger protein 473 (Zinc finger protein 100 homolog) (Zfp-100)
ruditapes_s38553	termination of RNA polymerase II transcription	RNA metabolism	P	Zinc finger protein 473 (Zinc finger protein 100 homolog) (Zfp-100)
ruditapes_s38553	termination of RNA polymerase II transcription	cell organization and biogenesis	P	Zinc finger protein 473 (Zinc finger protein 100 homolog) (Zfp-100)
ruditapes_s38553	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 473 (Zinc finger protein 100 homolog) (Zfp-100)
ruditapes_c15126	"regulation of transcription, DNA-dependent"	RNA metabolism	P	GATA zinc finger domain-containing protein 1 (Ocular development-associated gene protein)
ruditapes_s40369	protein ubiquitination	protein metabolism	P	DDB1- and CUL4-associated factor 4 (WD repeat-containing protein 21A)
ruditapes_c25511	protein ubiquitination	protein metabolism	P	DDB1- and CUL4-associated factor 4 (WD repeat-containing protein 21A)
ruditapes_lrc32364	regulation of G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-B3
ruditapes_lrc32364	cell division	other biological processes	P	G2/mitotic-specific cyclin-B3
ruditapes_lrc32364	cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-B3
ruditapes_lrc32364	meiosis	cell cycle and proliferation	P	G2/mitotic-specific cyclin-B3
ruditapes_lrc32364	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	G2/mitotic-specific cyclin-B3
ruditapes_lrc32364	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	G2/mitotic-specific cyclin-B3
ruditapes_c11333	biological_process	other biological processes	P	Ataxin-2-like protein (Ataxin-2 domain protein) (Ataxin-2-related protein)
ruditapes_c17154	small GTPase mediated signal transduction	signal transduction	P	"Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (Centaurin-delta-3) (Cnt-d3)"
ruditapes_c17154	negative regulation of Rac protein signal transduction	signal transduction	P	"Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (Centaurin-delta-3) (Cnt-d3)"
ruditapes_c17154	regulation of cell shape	cell organization and biogenesis	P	"Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (Centaurin-delta-3) (Cnt-d3)"
ruditapes_c17154	regulation of ARF GTPase activity	signal transduction	P	"Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (Centaurin-delta-3) (Cnt-d3)"
ruditapes_c17154	regulation of small GTPase mediated signal transduction	signal transduction	P	"Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (Centaurin-delta-3) (Cnt-d3)"
ruditapes_c17154	vesicle-mediated transport	transport	P	"Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (Centaurin-delta-3) (Cnt-d3)"
ruditapes_c17154	signal transduction	signal transduction	P	"Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (Centaurin-delta-3) (Cnt-d3)"
ruditapes_c17154	negative regulation of cell migration	other biological processes	P	"Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (Centaurin-delta-3) (Cnt-d3)"
ruditapes_c17154	negative regulation of Rho protein signal transduction	signal transduction	P	"Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (Centaurin-delta-3) (Cnt-d3)"
ruditapes_c17154	positive regulation of Rho GTPase activity	signal transduction	P	"Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (Centaurin-delta-3) (Cnt-d3)"
ruditapes_c17154	cytoskeleton organization	cell organization and biogenesis	P	"Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (Centaurin-delta-3) (Cnt-d3)"
ruditapes_c23782	T cell differentiation	developmental processes	P	GTPase IMAP family member 1 (Immunity-associated protein 1) (hIMAP1)
ruditapes_c23782	B cell differentiation	developmental processes	P	GTPase IMAP family member 1 (Immunity-associated protein 1) (hIMAP1)
ruditapes_c23087	angiogenesis	developmental processes	P	"Stabilin-2 (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 2) (FEEL-2) (Hyaluronan receptor for endocytosis) [Cleaved into: 190 kDa form stabilin-2 (190 kDa hyaluronan receptor for endocytosis)]"
ruditapes_c23087	endocytosis	transport	P	"Stabilin-2 (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 2) (FEEL-2) (Hyaluronan receptor for endocytosis) [Cleaved into: 190 kDa form stabilin-2 (190 kDa hyaluronan receptor for endocytosis)]"
ruditapes_c23087	endocytosis	cell organization and biogenesis	P	"Stabilin-2 (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 2) (FEEL-2) (Hyaluronan receptor for endocytosis) [Cleaved into: 190 kDa form stabilin-2 (190 kDa hyaluronan receptor for endocytosis)]"
ruditapes_c23087	receptor-mediated endocytosis	transport	P	"Stabilin-2 (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 2) (FEEL-2) (Hyaluronan receptor for endocytosis) [Cleaved into: 190 kDa form stabilin-2 (190 kDa hyaluronan receptor for endocytosis)]"
ruditapes_c23087	receptor-mediated endocytosis	cell organization and biogenesis	P	"Stabilin-2 (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 2) (FEEL-2) (Hyaluronan receptor for endocytosis) [Cleaved into: 190 kDa form stabilin-2 (190 kDa hyaluronan receptor for endocytosis)]"
ruditapes_c23087	defense response to bacterium	stress response	P	"Stabilin-2 (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 2) (FEEL-2) (Hyaluronan receptor for endocytosis) [Cleaved into: 190 kDa form stabilin-2 (190 kDa hyaluronan receptor for endocytosis)]"
ruditapes_c23087	cell adhesion	cell adhesion	P	"Stabilin-2 (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Fasciclin, EGF-like, laminin-type EGF-like and link domain-containing scavenger receptor 2) (FEEL-2) (Hyaluronan receptor for endocytosis) [Cleaved into: 190 kDa form stabilin-2 (190 kDa hyaluronan receptor for endocytosis)]"
ruditapes_c21494	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 10
ruditapes_c21494	transport	transport	P	ATP-binding cassette sub-family A member 10
ruditapes_c9571	transport	transport	P	ATP-binding cassette sub-family A member 10
ruditapes_c9571	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 10
ruditapes2_c3388	positive regulation of viral transcription	RNA metabolism	P	Negative elongation factor B (NELF-B) (Cofactor of BRCA1)
ruditapes2_c3388	RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Negative elongation factor B (NELF-B) (Cofactor of BRCA1)
ruditapes2_c3388	"transcription, DNA-dependent"	RNA metabolism	P	Negative elongation factor B (NELF-B) (Cofactor of BRCA1)
ruditapes2_c3388	gene expression	other metabolic processes	P	Negative elongation factor B (NELF-B) (Cofactor of BRCA1)
ruditapes2_c3388	viral reproduction	other biological processes	P	Negative elongation factor B (NELF-B) (Cofactor of BRCA1)
ruditapes2_c3388	transcription from RNA polymerase II promoter	RNA metabolism	P	Negative elongation factor B (NELF-B) (Cofactor of BRCA1)
ruditapes2_c3388	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Negative elongation factor B (NELF-B) (Cofactor of BRCA1)
ruditapes2_c3388	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Negative elongation factor B (NELF-B) (Cofactor of BRCA1)
ruditapes_c19980	transport	transport	P	5-hydroxytryptamine receptor 3C (5-HT3-C) (5-HT3C) (Serotonin receptor 3C)
ruditapes_c19980	ion transport	transport	P	5-hydroxytryptamine receptor 3C (5-HT3-C) (5-HT3C) (Serotonin receptor 3C)
ruditapes_c19980	transmembrane ion transport	transport	P	5-hydroxytryptamine receptor 3C (5-HT3-C) (5-HT3C) (Serotonin receptor 3C)
ruditapes_c19980	transmembrane transport	transport	P	5-hydroxytryptamine receptor 3C (5-HT3-C) (5-HT3C) (Serotonin receptor 3C)
ruditapes_c20888	regulation of cell cycle	cell cycle and proliferation	P	MAP kinase-activating death domain protein (Differentially expressed in normal and neoplastic cells) (Insulinoma glucagonoma clone 20) (Rab3 GDP/GTP exchange factor)
ruditapes_c20888	activation of MAPK activity	signal transduction	P	MAP kinase-activating death domain protein (Differentially expressed in normal and neoplastic cells) (Insulinoma glucagonoma clone 20) (Rab3 GDP/GTP exchange factor)
ruditapes_c20888	activation of MAPK activity	protein metabolism	P	MAP kinase-activating death domain protein (Differentially expressed in normal and neoplastic cells) (Insulinoma glucagonoma clone 20) (Rab3 GDP/GTP exchange factor)
ruditapes_c20888	apoptosis	death	P	MAP kinase-activating death domain protein (Differentially expressed in normal and neoplastic cells) (Insulinoma glucagonoma clone 20) (Rab3 GDP/GTP exchange factor)
ruditapes_c20888	positive regulation of protein amino acid phosphorylation	protein metabolism	P	MAP kinase-activating death domain protein (Differentially expressed in normal and neoplastic cells) (Insulinoma glucagonoma clone 20) (Rab3 GDP/GTP exchange factor)
ruditapes_c20888	cell surface receptor linked signal transduction	signal transduction	P	MAP kinase-activating death domain protein (Differentially expressed in normal and neoplastic cells) (Insulinoma glucagonoma clone 20) (Rab3 GDP/GTP exchange factor)
ruditapes_c20888	regulation of apoptosis	death	P	MAP kinase-activating death domain protein (Differentially expressed in normal and neoplastic cells) (Insulinoma glucagonoma clone 20) (Rab3 GDP/GTP exchange factor)
ruditapes_c23359	positive regulation of cell migration	other biological processes	P	Nesprin-2 (Nuclear envelope spectrin repeat protein 2) (Nucleus and actin connecting element protein) (Protein NUANCE) (Synaptic nuclear envelope protein 2) (Syne-2)
ruditapes_c23359	nuclear migration along microfilament	transport	P	Nesprin-2 (Nuclear envelope spectrin repeat protein 2) (Nucleus and actin connecting element protein) (Protein NUANCE) (Synaptic nuclear envelope protein 2) (Syne-2)
ruditapes_c23359	centrosome localization	other biological processes	P	Nesprin-2 (Nuclear envelope spectrin repeat protein 2) (Nucleus and actin connecting element protein) (Protein NUANCE) (Synaptic nuclear envelope protein 2) (Syne-2)
ruditapes_c23359	nuclear migration	other biological processes	P	Nesprin-2 (Nuclear envelope spectrin repeat protein 2) (Nucleus and actin connecting element protein) (Protein NUANCE) (Synaptic nuclear envelope protein 2) (Syne-2)
ruditapes_c22262	ciliary or flagellar motility	other biological processes	P	"Dynein heavy chain 7, axonemal (Axonemal beta dynein heavy chain 7) (Ciliary dynein heavy chain 7) (Dynein heavy chain-like protein 2) (hDHC2)"
ruditapes_c22262	microtubule-based movement	other biological processes	P	"Dynein heavy chain 7, axonemal (Axonemal beta dynein heavy chain 7) (Ciliary dynein heavy chain 7) (Dynein heavy chain-like protein 2) (hDHC2)"
ruditapes2_c1124	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes_c18475	histone H3 acetylation	protein metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes_c18475	histone H3 acetylation	cell organization and biogenesis	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes_c18475	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes2_c1124	protein amino acid acetylation	protein metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes2_c1124	negative regulation of growth	other biological processes	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes_c18475	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes_c18475	negative regulation of cell proliferation	cell cycle and proliferation	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes_c18475	chromatin modification	cell organization and biogenesis	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes2_c1124	negative regulation of cell proliferation	cell cycle and proliferation	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes_c18475	protein amino acid acetylation	protein metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes_c18475	"transcription, DNA-dependent"	RNA metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes2_c1124	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes_c18475	DNA replication	DNA metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes_c18475	negative regulation of growth	other biological processes	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes2_c1124	DNA replication	DNA metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes2_c1124	histone H3 acetylation	protein metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes2_c1124	histone H3 acetylation	cell organization and biogenesis	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes2_c1124	chromatin modification	cell organization and biogenesis	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes2_c1124	"transcription, DNA-dependent"	RNA metabolism	P	Inhibitor of growth protein 5 (p28ING5)
ruditapes_c1972	small GTPase mediated signal transduction	signal transduction	P	Ras and Rab interactor 2 (Ras association domain family 4) (Ras inhibitor JC265) (Ras interaction/interference protein 2)
ruditapes_c1972	endocytosis	transport	P	Ras and Rab interactor 2 (Ras association domain family 4) (Ras inhibitor JC265) (Ras interaction/interference protein 2)
ruditapes_c1972	endocytosis	cell organization and biogenesis	P	Ras and Rab interactor 2 (Ras association domain family 4) (Ras inhibitor JC265) (Ras interaction/interference protein 2)
ruditapes_c1972	signal transduction	signal transduction	P	Ras and Rab interactor 2 (Ras association domain family 4) (Ras inhibitor JC265) (Ras interaction/interference protein 2)
ruditapes_c1972	positive regulation of GTPase activity	other biological processes	P	Ras and Rab interactor 2 (Ras association domain family 4) (Ras inhibitor JC265) (Ras interaction/interference protein 2)
ruditapes_c21461	cardiac myofibril assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	cardiac myofibril assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	regulation of catalytic activity	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	response to calcium ion	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	cardiac muscle tissue morphogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	muscle thick filament assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	muscle thick filament assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	muscle thick filament assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	muscle thick filament assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	sarcomerogenesis	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	response to calcium ion	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	response to calcium ion	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	platelet activation	stress response	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	protein amino acid phosphorylation	protein metabolism	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	cardiac muscle tissue morphogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	muscle thin filament assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	regulation of catalytic activity	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	sarcomere organization	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	sarcomere organization	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	sarcomerogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	cardiac muscle tissue morphogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	protein amino acid phosphorylation	protein metabolism	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	muscle contraction	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	platelet degranulation	transport	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	striated muscle contraction	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	muscle thin filament assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	cardiac myofibril assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	striated muscle contraction	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	protein amino acid phosphorylation	protein metabolism	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	sarcomere organization	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	sarcomere organization	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	phosphorylation	other metabolic processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	mitotic chromosome condensation	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	sarcomere organization	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	sarcomere organization	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	response to calcium ion	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	muscle filament sliding	transport	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	cardiac myofibril assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	cardiac muscle fiber development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	muscle thick filament assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	muscle thick filament assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	regulation of protein kinase activity	other metabolic processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	regulation of catalytic activity	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	mitotic chromosome condensation	cell cycle and proliferation	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	cardiac muscle fiber development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	muscle thin filament assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	muscle thin filament assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	striated muscle contraction	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	blood coagulation	stress response	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	cardiac muscle tissue morphogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	muscle thin filament assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	cardiac muscle fiber development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	mitotic chromosome condensation	cell cycle and proliferation	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	mitotic chromosome condensation	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	mitotic chromosome condensation	cell cycle and proliferation	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	mitotic chromosome condensation	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	cardiac myofibril assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	cardiac myofibril assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	platelet activation	stress response	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	phosphorylation	other metabolic processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	platelet activation	stress response	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	muscle thin filament assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	muscle thin filament assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	muscle thin filament assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	regulation of catalytic activity	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	sarcomerogenesis	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	muscle contraction	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	platelet degranulation	transport	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	platelet activation	stress response	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	sarcomerogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	sarcomerogenesis	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	muscle contraction	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	platelet degranulation	transport	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	cardiac myofibril assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	cardiac myofibril assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	phosphorylation	other metabolic processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	sarcomerogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	mitotic chromosome condensation	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	sarcomere organization	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	sarcomere organization	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	regulation of protein kinase activity	other metabolic processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	protein amino acid phosphorylation	protein metabolism	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	striated muscle contraction	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	blood coagulation	stress response	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	muscle contraction	other biological processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	sarcomerogenesis	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	sarcomerogenesis	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	mitotic chromosome condensation	cell cycle and proliferation	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	regulation of protein kinase activity	other metabolic processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	muscle filament sliding	transport	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	muscle filament sliding	transport	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	cardiac muscle fiber development	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c7231	blood coagulation	stress response	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	platelet degranulation	transport	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	muscle filament sliding	transport	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	muscle thick filament assembly	developmental processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	muscle thick filament assembly	cell organization and biogenesis	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c12335	blood coagulation	stress response	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c21461	regulation of protein kinase activity	other metabolic processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c19271	phosphorylation	other metabolic processes	P	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)
ruditapes_c31023	proteolysis	protein metabolism	P	Probable proteasome subunit alpha type-2 (EC 3.4.25.1)
ruditapes_c31023	ubiquitin-dependent protein catabolic process	protein metabolism	P	Probable proteasome subunit alpha type-2 (EC 3.4.25.1)
ruditapes_c31023	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Probable proteasome subunit alpha type-2 (EC 3.4.25.1)
ruditapes_c2740	superoxide metabolic process	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c2740	oxidation reduction	other metabolic processes	P	Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
ruditapes_c28967	potassium ion transport	transport	P	L-glyceraldehyde 3-phosphate reductase (GAP reductase) (EC 1.1.1.-)
ruditapes_c29771	transmembrane transport	transport	P	L-glyceraldehyde 3-phosphate reductase (GAP reductase) (EC 1.1.1.-)
ruditapes_c28967	transmembrane transport	transport	P	L-glyceraldehyde 3-phosphate reductase (GAP reductase) (EC 1.1.1.-)
ruditapes_c29771	potassium ion transport	transport	P	L-glyceraldehyde 3-phosphate reductase (GAP reductase) (EC 1.1.1.-)
ruditapes2_c2689	ketone body catabolic process	other metabolic processes	P	Acetate CoA-transferase YdiF (EC 2.8.3.8) (Short-chain acyl-CoA:acetate CoA-transferase)
ruditapes2_c2689	metabolic process	other metabolic processes	P	Acetate CoA-transferase YdiF (EC 2.8.3.8) (Short-chain acyl-CoA:acetate CoA-transferase)
ruditapes_s34448	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_s34448	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_s34448	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_s34448	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_s34448	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes2_c2105	purine ribonucleoside monophosphate biosynthetic process	other metabolic processes	P	Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
ruditapes2_c2105	nucleotide metabolic process	other metabolic processes	P	Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
ruditapes_c22612	terpenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c22612	isoprenoid biosynthetic process	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes_c22612	phosphorylation	other metabolic processes	P	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)
ruditapes2_c1232	cell division	other biological processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes2_c1232	regulation of cell shape	cell organization and biogenesis	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes2_c1232	folic acid and derivative biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes2_c1232	cell cycle	cell cycle and proliferation	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes2_c1232	peptidoglycan biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes2_c1232	tetrahydrofolylpolyglutamate biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes2_c1232	peptidoglycan-based cell wall biogenesis	other biological processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes2_c1232	cell wall organization	cell organization and biogenesis	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes2_c1232	biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase)"
ruditapes_c13312	coenzyme A biosynthetic process	other metabolic processes	P	Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase)
ruditapes_c13312	phosphorylation	other metabolic processes	P	Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase)
ruditapes_c22501	nitrogen compound metabolic process	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes_c22501	metabolic process	other metabolic processes	P	[Protein-PII] uridylyltransferase (PII uridylyl-transferase) (EC 2.7.7.59) (UTase) (Uridylyl-removing enzyme)
ruditapes2_c2091	metabolic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes2_c2091	lipid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes2_c2091	fatty acid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.180) (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III)
ruditapes_c17667	methionine biosynthetic process	other metabolic processes	P	Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine O-transsuccinylase) (HTS)
ruditapes_c17667	methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine	other metabolic processes	P	Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine O-transsuccinylase) (HTS)
ruditapes_c17667	cellular amino acid biosynthetic process	other metabolic processes	P	Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine O-transsuccinylase) (HTS)
ruditapes_c16153	glycine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c16153	cellular amino acid biosynthetic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c16153	one-carbon compound metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c16153	L-serine metabolic process	other metabolic processes	P	Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
ruditapes_c12720	transport	transport	P	Potassium-transporting ATPase C chain 2 (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] C chain 2) (Potassium-binding and translocating subunit C 2) (Potassium-translocating ATPase C chain 2)
ruditapes_c12720	potassium ion transport	transport	P	Potassium-transporting ATPase C chain 2 (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] C chain 2) (Potassium-binding and translocating subunit C 2) (Potassium-translocating ATPase C chain 2)
ruditapes_c12720	ion transport	transport	P	Potassium-transporting ATPase C chain 2 (EC 3.6.3.12) (ATP phosphohydrolase [potassium-transporting] C chain 2) (Potassium-binding and translocating subunit C 2) (Potassium-translocating ATPase C chain 2)
ruditapes2_lrc5312	oxidation reduction	other metabolic processes	P	"Coproporphyrinogen-III oxidase, aerobic 2 (Coprogen oxidase 2) (Coproporphyrinogenase 2) (EC 1.3.3.3)"
ruditapes2_lrc5312	porphyrin biosynthetic process	other metabolic processes	P	"Coproporphyrinogen-III oxidase, aerobic 2 (Coprogen oxidase 2) (Coproporphyrinogenase 2) (EC 1.3.3.3)"
ruditapes_c19838	cell wall organization	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c19838	regulation of cell shape	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c19838	peptidoglycan biosynthetic process	other metabolic processes	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes2_c2231	SOS response	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2231	response to DNA damage stimulus	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2231	DNA recombination	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2231	DNA repair	stress response	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes2_c2231	DNA repair	DNA metabolism	P	Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
ruditapes_c12491	RNA processing	RNA metabolism	P	Ribonuclease 3 1 (EC 3.1.26.3) (Ribonuclease III 1) (RNase III 1)
ruditapes_c12491	rRNA catabolic process	RNA metabolism	P	Ribonuclease 3 1 (EC 3.1.26.3) (Ribonuclease III 1) (RNase III 1)
ruditapes_c16224	UDP-glucose metabolic process	other metabolic processes	P	Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12)
ruditapes_c16224	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12)
ruditapes_c25341	lipoate biosynthetic process	other metabolic processes	P	Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA)
ruditapes_c7484	lipopolysaccharide biosynthetic process	other metabolic processes	P	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC (EC 3.1.3.45) (KDO 8-P phosphatase)
ruditapes2_c1217	ATP catabolic process	other metabolic processes	P	Chaperone protein HscA (Hsc66)
ruditapes2_c1217	iron-sulfur cluster assembly	other metabolic processes	P	Chaperone protein HscA (Hsc66)
ruditapes2_c1217	protein folding	protein metabolism	P	Chaperone protein HscA (Hsc66)
ruditapes_c29887	cell division	other biological processes	P	DNA translocase FtsK
ruditapes_c29887	cell cycle	cell cycle and proliferation	P	DNA translocase FtsK
ruditapes_c29887	chromosome segregation	other biological processes	P	DNA translocase FtsK
ruditapes_c11914	metabolic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (GPAT) (EC 2.3.1.15)
ruditapes_c11914	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (GPAT) (EC 2.3.1.15)
ruditapes_c11914	cellular lipid metabolic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (GPAT) (EC 2.3.1.15)
ruditapes_c8036	tricarboxylic acid cycle	other metabolic processes	P	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
ruditapes_c8036	transport	transport	P	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
ruditapes_c8036	oxidation reduction	other metabolic processes	P	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
ruditapes_c8036	electron transport chain	other metabolic processes	P	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
ruditapes_c9216	purine base metabolic process	other metabolic processes	P	Ureidoglycolate hydrolase (EC 3.5.3.19)
ruditapes_c9216	allantoin catabolic process	other metabolic processes	P	Ureidoglycolate hydrolase (EC 3.5.3.19)
ruditapes_c712	cellular amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit 2 (EC 4.2.1.33) (Alpha-IPM isomerase 2) (IPMI 2) (Isopropylmalate isomerase 2)
ruditapes_c712	leucine biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit 2 (EC 4.2.1.33) (Alpha-IPM isomerase 2) (IPMI 2) (Isopropylmalate isomerase 2)
ruditapes_c712	branched chain family amino acid biosynthetic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit 2 (EC 4.2.1.33) (Alpha-IPM isomerase 2) (IPMI 2) (Isopropylmalate isomerase 2)
ruditapes_c712	metabolic process	other metabolic processes	P	3-isopropylmalate dehydratase large subunit 2 (EC 4.2.1.33) (Alpha-IPM isomerase 2) (IPMI 2) (Isopropylmalate isomerase 2)
ruditapes_c5446	RNA modification	RNA metabolism	P	Probable tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)
ruditapes_c5446	tRNA processing	RNA metabolism	P	Probable tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)
ruditapes_c5446	pseudouridine synthesis	RNA metabolism	P	Probable tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)
ruditapes_lrc13093	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	Probable DNA primase small subunit (EC 2.7.7.-)
ruditapes_lrc13093	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	Probable DNA primase small subunit (EC 2.7.7.-)
ruditapes_lrc20020	"transcription, DNA-dependent"	RNA metabolism	P	Probable DNA primase small subunit (EC 2.7.7.-)
ruditapes_lrc13093	"transcription, DNA-dependent"	RNA metabolism	P	Probable DNA primase small subunit (EC 2.7.7.-)
ruditapes_lrc20020	DNA replication	DNA metabolism	P	Probable DNA primase small subunit (EC 2.7.7.-)
ruditapes_lrc20020	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	Probable DNA primase small subunit (EC 2.7.7.-)
ruditapes_lrc20020	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	Probable DNA primase small subunit (EC 2.7.7.-)
ruditapes_lrc13093	DNA replication	DNA metabolism	P	Probable DNA primase small subunit (EC 2.7.7.-)
ruditapes_c19135	tricarboxylic acid cycle	other metabolic processes	P	Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta) (SCS-beta)
ruditapes_c19135	metabolic process	other metabolic processes	P	Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta) (SCS-beta)
ruditapes_c21327	polyamine biosynthetic process	other metabolic processes	P	Arginine decarboxylase proenzyme (ADC) (ArgDC) (EC 4.1.1.19) (Pyruvoyl-dependent arginine decarboxylase) [Cleaved into: Arginine decarboxylase beta chain; Arginine decarboxylase alpha chain]
ruditapes_c21327	spermidine biosynthetic process	other metabolic processes	P	Arginine decarboxylase proenzyme (ADC) (ArgDC) (EC 4.1.1.19) (Pyruvoyl-dependent arginine decarboxylase) [Cleaved into: Arginine decarboxylase beta chain; Arginine decarboxylase alpha chain]
ruditapes_c20140	tRNA aminoacylation for protein translation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c20140	isoleucyl-tRNA aminoacylation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c20140	isoleucyl-tRNA aminoacylation	RNA metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c20140	translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c20140	tRNA aminoacylation for protein translation	protein metabolism	P	Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)
ruditapes_c20483	metabolic process	other metabolic processes	P	Bifunctional phosphoglucose/phosphomannose isomerase (Glucose-6-phosphate isomerase) (GPI) (EC 5.3.1.9) (Mannose-6-phosphate isomerase) (EC 5.3.1.8) (Phosphoglucose isomerase) (PGI) (Phosphomannose isomerase) (PMI)
ruditapes_c20483	carbohydrate metabolic process	other metabolic processes	P	Bifunctional phosphoglucose/phosphomannose isomerase (Glucose-6-phosphate isomerase) (GPI) (EC 5.3.1.9) (Mannose-6-phosphate isomerase) (EC 5.3.1.8) (Phosphoglucose isomerase) (PGI) (Phosphomannose isomerase) (PMI)
ruditapes2_c2929	ion transport	transport	P	Probable glutamate receptor (Kainate-binding protein)
ruditapes2_c2929	ionotropic glutamate receptor signaling pathway	signal transduction	P	Probable glutamate receptor (Kainate-binding protein)
ruditapes2_c2929	transport	transport	P	Probable glutamate receptor (Kainate-binding protein)
ruditapes_c16861	proteolysis	protein metabolism	P	Carboxypeptidase D (EC 3.4.17.22) (Metallocarboxypeptidase D) (gp180) (p170)
ruditapes_lrc11983	anatomical structure morphogenesis	other biological processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	hindbrain development	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	morphogenesis of embryonic epithelium	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	endoderm formation	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	ectoderm development	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	"transcription, DNA-dependent"	RNA metabolism	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	mesoderm development	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	brain development	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	multicellular organismal development	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	embryonic pattern specification	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	brain segmentation	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	dorsal/ventral pattern formation	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	fin regeneration	stress response	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	fin regeneration	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes_lrc11983	epiboly involved in gastrulation with mouth forming second	developmental processes	P	"POU domain, class 5, transcription factor 1 (POU domain protein 2)"
ruditapes2_c6512	multicellular organismal development	developmental processes	P	Agrin (Fragment)
ruditapes2_c6512	cell differentiation	other biological processes	P	Agrin (Fragment)
ruditapes_c23493	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor MafK
ruditapes_c23493	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor MafK
ruditapes_c26454	GTP catabolic process	other metabolic processes	P	Interferon-induced GTP-binding protein Mx (Interferon-inducible Mx protein)
ruditapes2_c3159	proteolysis	protein metabolism	P	Trypsin I-P1 (EC 3.4.21.4)
ruditapes2_c3159	digestion	other biological processes	P	Trypsin I-P1 (EC 3.4.21.4)
ruditapes_c9198	toll-like receptor signaling pathway	signal transduction	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c9198	toll-like receptor signaling pathway	stress response	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c9198	"transcription, DNA-dependent"	RNA metabolism	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c9198	toll-like receptor 3 signaling pathway	signal transduction	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c9198	toll-like receptor 3 signaling pathway	stress response	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c9198	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c9198	activation of innate immune response	stress response	P	Interferon regulatory factor 3 (IRF-3)
ruditapes_c26755	anti-apoptosis	death	P	Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell apoptosis protein)
ruditapes_c26755	negative regulation of apoptosis	death	P	Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell apoptosis protein)
ruditapes_c26755	regulation of apoptosis	death	P	Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell apoptosis protein)
ruditapes_c26755	apoptosis	death	P	Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell apoptosis protein)
ruditapes_c5560	lipid catabolic process	other metabolic processes	P	Platelet-activating factor acetylhydrolase (PAF acetylhydrolase) (EC 3.1.1.47) (1-alkyl-2-acetylglycerophosphocholine esterase) (2-acetyl-1-alkylglycerophosphocholine esterase) (LDL-associated phospholipase A2) (LDL-PLA(2)) (PAF 2-acylhydrolase)
ruditapes_c19764	cell adhesion	cell adhesion	P	"Myosin-binding protein C, cardiac-type (Cardiac MyBP-C) (C-protein, cardiac muscle isoform)"
ruditapes_c19764	positive regulation of ATPase activity	other biological processes	P	"Myosin-binding protein C, cardiac-type (Cardiac MyBP-C) (C-protein, cardiac muscle isoform)"
ruditapes_c19764	regulation of muscle filament sliding	transport	P	"Myosin-binding protein C, cardiac-type (Cardiac MyBP-C) (C-protein, cardiac muscle isoform)"
ruditapes_c9063	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Heart- and neural crest derivatives-expressed protein 2 (Deciduum, heart, autonomic nervous system and neural crest derivatives-expressed protein 2) (dHAND)"
ruditapes_c9063	"transcription, DNA-dependent"	RNA metabolism	P	"Heart- and neural crest derivatives-expressed protein 2 (Deciduum, heart, autonomic nervous system and neural crest derivatives-expressed protein 2) (dHAND)"
ruditapes_c9063	multicellular organismal development	developmental processes	P	"Heart- and neural crest derivatives-expressed protein 2 (Deciduum, heart, autonomic nervous system and neural crest derivatives-expressed protein 2) (dHAND)"
ruditapes_c12607	peptidyl-cysteine S-nitrosylation	protein metabolism	P	"Nitric oxide synthase, inducible (EC 1.14.13.39) (Inducible NO synthase) (Inducible NOS) (iNOS) (Macrophage NOS) (NOS type II) (Peptidyl-cysteine S-nitrosylase NOS2)"
ruditapes_c12607	nitric oxide biosynthetic process	other metabolic processes	P	"Nitric oxide synthase, inducible (EC 1.14.13.39) (Inducible NO synthase) (Inducible NOS) (iNOS) (Macrophage NOS) (NOS type II) (Peptidyl-cysteine S-nitrosylase NOS2)"
ruditapes_c12607	oxidation reduction	other metabolic processes	P	"Nitric oxide synthase, inducible (EC 1.14.13.39) (Inducible NO synthase) (Inducible NOS) (iNOS) (Macrophage NOS) (NOS type II) (Peptidyl-cysteine S-nitrosylase NOS2)"
ruditapes_c15263	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_lrc30577	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes2_c46	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c15263	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes_lrc27061	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes_lrc30577	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes_lrc30577	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes2_c46	GTP catabolic process	other metabolic processes	P	Elongation factor 2 (EF-2)
ruditapes_c15263	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_lrc27061	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_lrc27061	translational elongation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes2_c46	translation	protein metabolism	P	Elongation factor 2 (EF-2)
ruditapes_c12266	carbohydrate metabolic process	other metabolic processes	P	Alpha-N-acetylgalactosaminidase (EC 3.2.1.49) (Alpha-galactosidase B)
ruditapes_c12266	metabolic process	other metabolic processes	P	Alpha-N-acetylgalactosaminidase (EC 3.2.1.49) (Alpha-galactosidase B)
ruditapes_c15034	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Follistatin (FS) (Activin-binding protein)
ruditapes_c15034	positive regulation of hair follicle development	developmental processes	P	Follistatin (FS) (Activin-binding protein)
ruditapes_c15034	hemopoietic progenitor cell differentiation	developmental processes	P	Follistatin (FS) (Activin-binding protein)
ruditapes_c15034	negative regulation of activin receptor signaling pathway	signal transduction	P	Follistatin (FS) (Activin-binding protein)
ruditapes_c29530	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein polybromo-1
ruditapes_c29530	"transcription, DNA-dependent"	RNA metabolism	P	Protein polybromo-1
ruditapes_c29530	chromatin modification	cell organization and biogenesis	P	Protein polybromo-1
ruditapes_c8504	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c34684	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c38491	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c3262	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c3275	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c13224	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c25028	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c16175	cell adhesion	cell adhesion	P	Versican core protein (Chondroitin sulfate proteoglycan core protein 2) (Chondroitin sulfate proteoglycan 2) (Large fibroblast proteoglycan) (PG-M)
ruditapes_c7628	tetrahydrobiopterin biosynthetic process	other metabolic processes	P	6-pyruvoyl tetrahydrobiopterin synthase (PTP synthase) (PTPS) (EC 4.2.3.12)
ruditapes_c17577	proteolysis	protein metabolism	P	Ovochymase-2 (EC 3.4.21.120) (Oviductal protease) (Oviductin)
ruditapes_c9390	defense response to Gram-negative bacterium	stress response	P	Lactose-binding lectin l-2 (Ajl-2)
ruditapes_c9390	induction of bacterial agglutination	stress response	P	Lactose-binding lectin l-2 (Ajl-2)
ruditapes_c9390	defense response to bacterium	stress response	P	Lactose-binding lectin l-2 (Ajl-2)
ruditapes_c20040	"transcription, DNA-dependent"	RNA metabolism	P	Nuclear respiratory factor 1 (Nrf-1) (Not really finished protein)
ruditapes_c20040	response to stress	stress response	P	Nuclear respiratory factor 1 (Nrf-1) (Not really finished protein)
ruditapes_c20040	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nuclear respiratory factor 1 (Nrf-1) (Not really finished protein)
ruditapes_c20040	response to cold	stress response	P	Nuclear respiratory factor 1 (Nrf-1) (Not really finished protein)
ruditapes_c20040	retina development in camera-type eye	developmental processes	P	Nuclear respiratory factor 1 (Nrf-1) (Not really finished protein)
ruditapes_c20040	multicellular organismal development	developmental processes	P	Nuclear respiratory factor 1 (Nrf-1) (Not really finished protein)
ruditapes_c9239	cell communication	other biological processes	P	Protein jagged-1a (Jagged1) (Jagged1a)
ruditapes_c9239	multicellular organismal development	developmental processes	P	Protein jagged-1a (Jagged1) (Jagged1a)
ruditapes_c9239	Notch signaling pathway	signal transduction	P	Protein jagged-1a (Jagged1) (Jagged1a)
ruditapes_c26531	DNA repair	stress response	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	DNA repair	DNA metabolism	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	DNA ligation during DNA repair	stress response	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	DNA ligation during DNA repair	DNA metabolism	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	double-strand break repair	stress response	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	double-strand break repair	DNA metabolism	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	cell division	other biological processes	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	double-strand break repair via nonhomologous end joining	stress response	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	double-strand break repair via nonhomologous end joining	DNA metabolism	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	cell cycle	cell cycle and proliferation	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	response to DNA damage stimulus	stress response	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	DNA replication	DNA metabolism	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	DNA ligation	DNA metabolism	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes_c26531	DNA recombination	DNA metabolism	P	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)
ruditapes2_c1740	translational elongation	protein metabolism	P	Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)
ruditapes2_c1740	translation	protein metabolism	P	Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)
ruditapes_c25357	transport	transport	P	Organic solute transporter subunit alpha (OST-alpha) (Solute carrier family 51 subunit alpha)
ruditapes_lrc30876	ruffle organization	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein 1 homolog
ruditapes_lrc30876	axon extension	developmental processes	P	Cytoplasmic FMR1-interacting protein 1 homolog
ruditapes_lrc30876	axon extension	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein 1 homolog
ruditapes_lrc30876	lamellipodium assembly	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein 1 homolog
ruditapes_lrc30876	cell differentiation	other biological processes	P	Cytoplasmic FMR1-interacting protein 1 homolog
ruditapes_lrc30876	multicellular organismal development	developmental processes	P	Cytoplasmic FMR1-interacting protein 1 homolog
ruditapes_lrc30876	nervous system development	developmental processes	P	Cytoplasmic FMR1-interacting protein 1 homolog
ruditapes_lrc30876	regulation of cell shape	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein 1 homolog
ruditapes2_c40	translation	protein metabolism	P	40S ribosomal protein S28
ruditapes2_lrc4212	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_lrc33992	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_s33824	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_lrc34730	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc36377	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc38323	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes2_lrc6105	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_s32765	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc36900	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes2_lrc4320	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_s33369	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes2_lrc6059	translation	protein metabolism	P	40S ribosomal protein S8
ruditapes_lrc35015	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes2_lrc6230	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_s39096	translation	protein metabolism	P	40S ribosomal protein S3
ruditapes_lrc27815	translation	protein metabolism	P	40S ribosomal protein S2
ruditapes2_c19	translation	protein metabolism	P	40S ribosomal protein S2
ruditapes_lrc33380	translation	protein metabolism	P	40S ribosomal protein S2
ruditapes_lrc16425	translation	protein metabolism	P	40S ribosomal protein S2
ruditapes_c1897	translation	protein metabolism	P	60S ribosomal protein L37
ruditapes_lrc39062	translation	protein metabolism	P	60S ribosomal protein L32
ruditapes_s34187	translation	protein metabolism	P	60S ribosomal protein L32
ruditapes_lrc34086	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc33892	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc34086	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes_lrc37075	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc14511	protein localization in nucleus	other biological processes	P	60S ribosomal protein L11
ruditapes_lrc37075	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes_lrc33892	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes_lrc14511	translation	protein metabolism	P	60S ribosomal protein L11
ruditapes_lrc35365	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes2_lrc4437	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_c30847	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_c5556	ribosome biogenesis	other biological processes	P	60S ribosomal protein L7a
ruditapes_c9789	nervous system development	developmental processes	P	Protein unc-119 homolog B (Protein unc-119 homolog 1)
ruditapes_lrc36561	translation	protein metabolism	P	60S ribosomal protein L13
ruditapes2_lrc6231	regulation of cell cycle	cell cycle and proliferation	P	60S ribosomal protein L13
ruditapes_lrc35517	regulation of cell cycle	cell cycle and proliferation	P	60S ribosomal protein L13
ruditapes2_lrc6231	translation	protein metabolism	P	60S ribosomal protein L13
ruditapes2_c6422	regulation of cell cycle	cell cycle and proliferation	P	60S ribosomal protein L13
ruditapes_lrc35658	regulation of cell cycle	cell cycle and proliferation	P	60S ribosomal protein L13
ruditapes2_c3647	translation	protein metabolism	P	60S ribosomal protein L13
ruditapes2_lrc5253	translation	protein metabolism	P	60S ribosomal protein L13
ruditapes_lrc35517	translation	protein metabolism	P	60S ribosomal protein L13
ruditapes2_lrc4191	regulation of cell cycle	cell cycle and proliferation	P	60S ribosomal protein L13
ruditapes2_c3647	regulation of cell cycle	cell cycle and proliferation	P	60S ribosomal protein L13
ruditapes2_lrc5253	regulation of cell cycle	cell cycle and proliferation	P	60S ribosomal protein L13
ruditapes2_lrc5088	translation	protein metabolism	P	60S ribosomal protein L13
ruditapes2_c6422	translation	protein metabolism	P	60S ribosomal protein L13
ruditapes_lrc35658	translation	protein metabolism	P	60S ribosomal protein L13
ruditapes_lrc36561	regulation of cell cycle	cell cycle and proliferation	P	60S ribosomal protein L13
ruditapes2_lrc5088	regulation of cell cycle	cell cycle and proliferation	P	60S ribosomal protein L13
ruditapes2_lrc4191	translation	protein metabolism	P	60S ribosomal protein L13
ruditapes_c9435	neural crest formation	developmental processes	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	neural crest formation	cell organization and biogenesis	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	cell proliferation	cell cycle and proliferation	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	multicellular organismal development	developmental processes	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	anti-apoptosis	death	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	floor plate development	developmental processes	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	BMP signaling pathway	signal transduction	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	prechordal plate formation	developmental processes	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	lens development in camera-type eye	developmental processes	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c9435	cell differentiation	other biological processes	P	Transcription factor HES-4-A (Hairy and enhancer of split 4-A) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2a)
ruditapes_c28830	positive regulation of alkaline phosphatase activity	other metabolic processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	mesoderm development	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	regulation of bone mineralization	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	cartilage development	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	determination of left/right symmetry	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	gastrulation with mouth forming second	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	BMP signaling pathway	signal transduction	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	regulation of chondrocyte differentiation	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	negative regulation of activin receptor signaling pathway	signal transduction	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	negative regulation of signal transduction	signal transduction	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	heart development	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	positive regulation of bone mineralization	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	acute inflammatory response	stress response	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	pharyngeal system development	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	embryonic development	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	protein amino acid phosphorylation	protein metabolism	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	cardiac epithelial to mesenchymal transition	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	cardiac epithelial to mesenchymal transition	cell organization and biogenesis	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	mesoderm formation	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	endothelial cell activation	other biological processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	germ cell development	other biological processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	neural crest cell migration	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	in utero embryonic development	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	mesenchymal cell differentiation	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	smooth muscle cell differentiation	other biological processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	transmembrane receptor protein serine/threonine kinase signaling pathway	signal transduction	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	negative regulation of apoptosis	death	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	cell migration	other biological processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	phosphorylation	other metabolic processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	gastrulation	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	positive regulation of epithelial to mesenchymal transition	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	positive regulation of epithelial to mesenchymal transition	cell organization and biogenesis	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	patterning of blood vessels	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	transforming growth factor beta receptor signaling pathway	signal transduction	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	regulation of BMP signaling pathway	signal transduction	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	positive regulation of osteoblast differentiation	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	regulation of ossification	developmental processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c28830	regulation of phosphorylation	other metabolic processes	P	Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (Type I TGF B receptor)
ruditapes_c24684	protein polymerization	cell organization and biogenesis	P	Tubulin alpha chain
ruditapes_c24684	microtubule-based movement	other biological processes	P	Tubulin alpha chain
ruditapes_c24684	GTP catabolic process	other metabolic processes	P	Tubulin alpha chain
ruditapes_c24684	microtubule-based process	other biological processes	P	Tubulin alpha chain
ruditapes_lrc39205	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain (Fragment)
ruditapes_c15803	regulation of cell shape	cell organization and biogenesis	P	Fibronectin (FN) (Fragment)
ruditapes_c15803	acute-phase response	stress response	P	Fibronectin (FN) (Fragment)
ruditapes_c15803	cell adhesion	cell adhesion	P	Fibronectin (FN) (Fragment)
ruditapes_c34318	response to stress	stress response	P	Heat shock 70 kDa protein (HSP70)
ruditapes_c12674	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	CAD protein [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c12674	metabolic process	other metabolic processes	P	CAD protein [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c12674	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	CAD protein [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c12674	carbamoyl phosphate biosynthetic process	other metabolic processes	P	CAD protein [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c12674	nitrogen compound metabolic process	other metabolic processes	P	CAD protein [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c12674	glutamine catabolic process	other metabolic processes	P	CAD protein [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_c12674	cellular amino acid metabolic process	other metabolic processes	P	CAD protein [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]
ruditapes_lrc37603	translation	protein metabolism	P	60S ribosomal protein L13a (Transplantation antigen P198 homolog) (Fragment)
ruditapes2_c2216	neurotransmitter transport	transport	P	Creatine transporter
ruditapes2_c2216	ion transport	transport	P	Creatine transporter
ruditapes2_c2216	transport	transport	P	Creatine transporter
ruditapes2_c2216	sodium ion transport	transport	P	Creatine transporter
ruditapes_c29813	insulin-like growth factor receptor signaling pathway	signal transduction	P	Insulin receptor substrate 1-A (IRS1-A) (xIRS-1-A) (XIRS-L)
ruditapes_c29813	signal transduction	signal transduction	P	Insulin receptor substrate 1-A (IRS1-A) (xIRS-1-A) (XIRS-L)
ruditapes_c29813	insulin receptor signaling pathway	signal transduction	P	Insulin receptor substrate 1-A (IRS1-A) (xIRS-1-A) (XIRS-L)
ruditapes_lrc38461	phosphorylation	other metabolic processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Xgsk-3 protein)
ruditapes_lrc38461	Wnt receptor signaling pathway through beta-catenin	signal transduction	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Xgsk-3 protein)
ruditapes_lrc38461	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Xgsk-3 protein)
ruditapes_lrc38461	Wnt receptor signaling pathway	signal transduction	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Xgsk-3 protein)
ruditapes_lrc38461	cell differentiation	other biological processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Xgsk-3 protein)
ruditapes_lrc38461	nervous system development	developmental processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Xgsk-3 protein)
ruditapes_lrc38461	protein amino acid phosphorylation	protein metabolism	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Xgsk-3 protein)
ruditapes_lrc38461	multicellular organismal development	developmental processes	P	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Xgsk-3 protein)
ruditapes_c25224	histone monoubiquitination	protein metabolism	P	V(D)J recombination-activating protein 1 (RAG-1) [Includes: Endonuclease RAG1 (EC 3.1.-.-); E3 ubiquitin-protein ligase RAG1 (EC 6.3.2.-)]
ruditapes_c25224	histone monoubiquitination	cell organization and biogenesis	P	V(D)J recombination-activating protein 1 (RAG-1) [Includes: Endonuclease RAG1 (EC 3.1.-.-); E3 ubiquitin-protein ligase RAG1 (EC 6.3.2.-)]
ruditapes_c25224	metabolic process	other metabolic processes	P	V(D)J recombination-activating protein 1 (RAG-1) [Includes: Endonuclease RAG1 (EC 3.1.-.-); E3 ubiquitin-protein ligase RAG1 (EC 6.3.2.-)]
ruditapes_c25224	V(D)J recombination	developmental processes	P	V(D)J recombination-activating protein 1 (RAG-1) [Includes: Endonuclease RAG1 (EC 3.1.-.-); E3 ubiquitin-protein ligase RAG1 (EC 6.3.2.-)]
ruditapes_c25224	V(D)J recombination	DNA metabolism	P	V(D)J recombination-activating protein 1 (RAG-1) [Includes: Endonuclease RAG1 (EC 3.1.-.-); E3 ubiquitin-protein ligase RAG1 (EC 6.3.2.-)]
ruditapes_c25224	B cell differentiation	developmental processes	P	V(D)J recombination-activating protein 1 (RAG-1) [Includes: Endonuclease RAG1 (EC 3.1.-.-); E3 ubiquitin-protein ligase RAG1 (EC 6.3.2.-)]
ruditapes_c25224	chromatin modification	cell organization and biogenesis	P	V(D)J recombination-activating protein 1 (RAG-1) [Includes: Endonuclease RAG1 (EC 3.1.-.-); E3 ubiquitin-protein ligase RAG1 (EC 6.3.2.-)]
ruditapes_c25224	DNA recombination	DNA metabolism	P	V(D)J recombination-activating protein 1 (RAG-1) [Includes: Endonuclease RAG1 (EC 3.1.-.-); E3 ubiquitin-protein ligase RAG1 (EC 6.3.2.-)]
ruditapes_c25224	T cell differentiation in the thymus	developmental processes	P	V(D)J recombination-activating protein 1 (RAG-1) [Includes: Endonuclease RAG1 (EC 3.1.-.-); E3 ubiquitin-protein ligase RAG1 (EC 6.3.2.-)]
ruditapes_c21853	gastrulation	developmental processes	P	Homeobox protein siamois
ruditapes_c21853	multicellular organismal development	developmental processes	P	Homeobox protein siamois
ruditapes_c21853	nervous system development	developmental processes	P	Homeobox protein siamois
ruditapes_c21853	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein siamois
ruditapes_c21853	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Homeobox protein siamois
ruditapes_c21853	Spemann organizer formation at the dorsal lip of the blastopore	cell-cell signaling	P	Homeobox protein siamois
ruditapes_c21853	mesoderm formation	developmental processes	P	Homeobox protein siamois
ruditapes_c21853	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein siamois
ruditapes_c21853	cell differentiation	other biological processes	P	Homeobox protein siamois
ruditapes_c21853	"transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein siamois
ruditapes_c21853	Wnt receptor signaling pathway	signal transduction	P	Homeobox protein siamois
ruditapes2_c103	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 12 (TFIID subunit p22) (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15)
ruditapes2_c3406	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 12 (TFIID subunit p22) (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15)
ruditapes2_c3406	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 12 (TFIID subunit p22) (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15)
ruditapes2_c3406	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 12 (TFIID subunit p22) (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15)
ruditapes2_c3406	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 12 (TFIID subunit p22) (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15)
ruditapes2_c103	transcription initiation	RNA metabolism	P	Transcription initiation factor TFIID subunit 12 (TFIID subunit p22) (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15)
ruditapes2_c103	transcription initiation	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 12 (TFIID subunit p22) (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15)
ruditapes2_c103	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 12 (TFIID subunit p22) (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15)
ruditapes_s38398	protein amino acid phosphorylation	protein metabolism	P	Mast/stem cell growth factor receptor-related protein Kit (EC 2.7.10.1) (Kit-related kinase 1) (xKrk1) (Tyrosine-protein kinase kit)
ruditapes_s38398	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Mast/stem cell growth factor receptor-related protein Kit (EC 2.7.10.1) (Kit-related kinase 1) (xKrk1) (Tyrosine-protein kinase kit)
ruditapes_s38398	phosphorylation	other metabolic processes	P	Mast/stem cell growth factor receptor-related protein Kit (EC 2.7.10.1) (Kit-related kinase 1) (xKrk1) (Tyrosine-protein kinase kit)
ruditapes_lrc13091	DNA repair	stress response	P	Putative GIY-YIG domain-containing protein 242L
ruditapes_lrc13091	DNA repair	DNA metabolism	P	Putative GIY-YIG domain-containing protein 242L
ruditapes_c13732	DNA repair	stress response	P	Putative DNA ligase 205R (EC 6.5.1.2)
ruditapes_c13732	DNA repair	DNA metabolism	P	Putative DNA ligase 205R (EC 6.5.1.2)
ruditapes_c13732	DNA replication	DNA metabolism	P	Putative DNA ligase 205R (EC 6.5.1.2)
ruditapes_c16987	transport	transport	P	RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein (2C-CP)]
ruditapes_c16987	"spread of virus within host, cell to cell"	other biological processes	P	RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein (2C-CP)]
ruditapes_c16951	interspecies interaction between organisms	other biological processes	P	Replication-associated protein A (RepA) (EC 3.1.21.-)
ruditapes_c16951	DNA replication	DNA metabolism	P	Replication-associated protein A (RepA) (EC 3.1.21.-)
ruditapes_c10879	viral reproduction	other biological processes	P	Probable host range protein 2
ruditapes_c13914	biological_process	other biological processes	P	TELO2-interacting protein 1 homolog
ruditapes_c8038	pigmentation	other biological processes	P	Hermansky-Pudlak syndrome 3 protein homolog (Cocoa protein)
ruditapes_c8038	organelle organization	cell organization and biogenesis	P	Hermansky-Pudlak syndrome 3 protein homolog (Cocoa protein)
ruditapes_c28866	apoptosis	death	P	Growth hormone-inducible transmembrane protein (Mitochondrial morphology and cristae structure 1) (MICS1)
ruditapes_s39518	biological_process	other biological processes	P	Small integral membrane protein 14
ruditapes_lrc28204	biological_process	other biological processes	P	Small integral membrane protein 14
ruditapes_lrc36621	biological_process	other biological processes	P	Small integral membrane protein 14
ruditapes_lrc33509	biological_process	other biological processes	P	Small integral membrane protein 14
ruditapes_s38896	biological_process	other biological processes	P	Small integral membrane protein 14
ruditapes2_lrc6172	biological_process	other biological processes	P	Small integral membrane protein 14
ruditapes_lrc34206	biological_process	other biological processes	P	Small integral membrane protein 14
ruditapes_lrc32850	biological_process	other biological processes	P	Small integral membrane protein 14
ruditapes_s39526	biological_process	other biological processes	P	Small integral membrane protein 14
ruditapes2_lrc4510	biological_process	other biological processes	P	Small integral membrane protein 14
ruditapes2_c2548	mitotic cell cycle	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3)
ruditapes2_c2548	cell cycle	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3)
ruditapes2_c2548	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3)
ruditapes2_c2548	DNA repair	stress response	P	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3)
ruditapes2_c2548	DNA repair	DNA metabolism	P	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3)
ruditapes2_c2548	chromatin modification	cell organization and biogenesis	P	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3)
ruditapes2_c2548	regulation of protein stability	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3)
ruditapes2_c2548	response to DNA damage stimulus	stress response	P	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3)
ruditapes2_c2548	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3)
ruditapes2_c2548	histone deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3)
ruditapes2_c2548	histone deubiquitination	cell organization and biogenesis	P	Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.4.19.12) (Deubiquitinating enzyme 3) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3)
ruditapes_c12322	biological_process	other biological processes	P	Threonylcarbamoyladenosine tRNA methylthiotransferase (EC 2.-.-.-) (CDK5 regulatory subunit-associated protein 1-like 1) (tRNA-t(6)A37 methylthiotransferase)
ruditapes_c12322	RNA modification	RNA metabolism	P	Threonylcarbamoyladenosine tRNA methylthiotransferase (EC 2.-.-.-) (CDK5 regulatory subunit-associated protein 1-like 1) (tRNA-t(6)A37 methylthiotransferase)
ruditapes_c12322	biopolymer modification	other metabolic processes	P	Threonylcarbamoyladenosine tRNA methylthiotransferase (EC 2.-.-.-) (CDK5 regulatory subunit-associated protein 1-like 1) (tRNA-t(6)A37 methylthiotransferase)
ruditapes_c27297	response to stress	stress response	P	5'-AMP-activated protein kinase subunit gamma-2 (AMPK gamma2) (AMPK subunit gamma-2)
ruditapes_c27297	positive regulation of protein kinase activity	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-2 (AMPK gamma2) (AMPK subunit gamma-2)
ruditapes_c27297	glycogen metabolic process	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-2 (AMPK gamma2) (AMPK subunit gamma-2)
ruditapes_c27297	regulation of fatty acid metabolic process	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-2 (AMPK gamma2) (AMPK subunit gamma-2)
ruditapes_c27297	protein kinase cascade	signal transduction	P	5'-AMP-activated protein kinase subunit gamma-2 (AMPK gamma2) (AMPK subunit gamma-2)
ruditapes_c27297	regulation of catalytic activity	other biological processes	P	5'-AMP-activated protein kinase subunit gamma-2 (AMPK gamma2) (AMPK subunit gamma-2)
ruditapes_c27297	lipid biosynthetic process	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-2 (AMPK gamma2) (AMPK subunit gamma-2)
ruditapes_c27297	fatty acid biosynthetic process	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-2 (AMPK gamma2) (AMPK subunit gamma-2)
ruditapes_c27297	regulation of glycolysis	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-2 (AMPK gamma2) (AMPK subunit gamma-2)
ruditapes_c27297	positive regulation of peptidyl-threonine phosphorylation	protein metabolism	P	5'-AMP-activated protein kinase subunit gamma-2 (AMPK gamma2) (AMPK subunit gamma-2)
ruditapes_c27297	negative regulation of protein kinase activity	other metabolic processes	P	5'-AMP-activated protein kinase subunit gamma-2 (AMPK gamma2) (AMPK subunit gamma-2)
ruditapes2_lrc7450	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3) (eIF-3-gamma) (eIF3 p40 subunit)
ruditapes2_lrc7450	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h) (Eukaryotic translation initiation factor 3 subunit 3) (eIF-3-gamma) (eIF3 p40 subunit)
ruditapes_c14079	metabolic process	other metabolic processes	P	Cat eye syndrome critical region protein 5 homolog
ruditapes_c14079	biological_process	other biological processes	P	Cat eye syndrome critical region protein 5 homolog
ruditapes_c63	metabolic process	other metabolic processes	P	Cat eye syndrome critical region protein 5 homolog
ruditapes_c63	biological_process	other biological processes	P	Cat eye syndrome critical region protein 5 homolog
ruditapes_c19769	"transcription, DNA-dependent"	RNA metabolism	P	Activating signal cointegrator 1 complex subunit 2 (ASC-1 complex subunit p100) (Trip4 complex subunit p100)
ruditapes_c19769	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Activating signal cointegrator 1 complex subunit 2 (ASC-1 complex subunit p100) (Trip4 complex subunit p100)
ruditapes_c19769	biological_process	other biological processes	P	Activating signal cointegrator 1 complex subunit 2 (ASC-1 complex subunit p100) (Trip4 complex subunit p100)
ruditapes2_c3983	oxidation reduction	other metabolic processes	P	Glutathione peroxidase 6 (GPx-6) (GSHPx-6) (EC 1.11.1.9)
ruditapes2_c3707	response to oxidative stress	stress response	P	Glutathione peroxidase 6 (GPx-6) (GSHPx-6) (EC 1.11.1.9)
ruditapes2_c3707	oxidation reduction	other metabolic processes	P	Glutathione peroxidase 6 (GPx-6) (GSHPx-6) (EC 1.11.1.9)
ruditapes2_c3983	response to oxidative stress	stress response	P	Glutathione peroxidase 6 (GPx-6) (GSHPx-6) (EC 1.11.1.9)
ruditapes_c22781	response to DNA damage stimulus	stress response	P	Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2-like protein)
ruditapes_c22781	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2-like protein)
ruditapes_c22781	positive regulation of cell proliferation	cell cycle and proliferation	P	Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2-like protein)
ruditapes_c22781	histone H3-K4 methylation	protein metabolism	P	Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2-like protein)
ruditapes_c22781	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2-like protein)
ruditapes_c22781	histone H3-K4 methylation	cell organization and biogenesis	P	Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2-like protein)
ruditapes_c22781	response to estrogen stimulus	other biological processes	P	Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2-like protein)
ruditapes_c22781	"transcription, DNA-dependent"	RNA metabolism	P	Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2-like protein)
ruditapes_c22781	chromatin modification	cell organization and biogenesis	P	Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2-like protein)
ruditapes_c12972	transport	transport	P	Feline leukemia virus subgroup C receptor-related protein 2 (Calcium-chelate transporter) (CCT)
ruditapes_c12972	heme transport	transport	P	Feline leukemia virus subgroup C receptor-related protein 2 (Calcium-chelate transporter) (CCT)
ruditapes_c12972	transmembrane transport	transport	P	Feline leukemia virus subgroup C receptor-related protein 2 (Calcium-chelate transporter) (CCT)
ruditapes_c399	small GTPase mediated signal transduction	signal transduction	P	Guanine nucleotide exchange factor MSS4 (Rab-interacting factor)
ruditapes_c399	protein transport	transport	P	Guanine nucleotide exchange factor MSS4 (Rab-interacting factor)
ruditapes_c399	transport	transport	P	Guanine nucleotide exchange factor MSS4 (Rab-interacting factor)
ruditapes_c399	biological_process	other biological processes	P	Guanine nucleotide exchange factor MSS4 (Rab-interacting factor)
ruditapes2_c973	erythrocyte differentiation	developmental processes	P	Solute carrier family 25 member 38
ruditapes2_c973	transport	transport	P	Solute carrier family 25 member 38
ruditapes_c13368	biological_process	other biological processes	P	Glycine N-acyltransferase (EC 2.3.1.13) (EC 2.3.1.71) (Acyl-CoA:glycine N-acyltransferase) (AAc) (Aralkyl acyl-CoA N-acyltransferase) (Aralkyl acyl-CoA:amino acid N-acyltransferase) (Benzoyl-coenzyme A:glycine N-acyltransferase) (Glycine N-benzoyltransferase)
ruditapes2_c1336	biological_process	other biological processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes_c24811	biological_process	other biological processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes_c24811	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes_c24811	microtubule-based movement	other biological processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes2_c1336	microtubule-based movement	other biological processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes2_c1336	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes_c21629	hexose biosynthetic process	other metabolic processes	P	Carbohydrate sulfotransferase 15 (EC 2.8.2.33) (B-cell RAG-associated gene protein) (N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase) (GalNAc4S-6ST)
ruditapes_c22198	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidate cytidylyltransferase 2 (EC 2.7.7.41) (CDP-DAG synthase 2) (CDP-DG synthase 2) (CDP-diacylglycerol synthase 2) (CDS 2) (CDP-diglyceride pyrophosphorylase 2) (CDP-diglyceride synthase 2) (CTP:phosphatidate cytidylyltransferase 2)
ruditapes_c21814	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase) (Sperm antigen P26h)
ruditapes_c21814	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase) (Sperm antigen P26h)
ruditapes_c21814	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase) (Sperm antigen P26h)
ruditapes_c21814	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase) (Sperm antigen P26h)
ruditapes_c21814	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase) (Sperm antigen P26h)
ruditapes_c21814	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase) (Sperm antigen P26h)
ruditapes_c21814	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase) (Sperm antigen P26h)
ruditapes_c5176	positive regulation of fibrinolysis	stress response	P	Coagulation factor XI (FXI) (EC 3.4.21.27) (Plasma thromboplastin antecedent) (PTA) [Cleaved into: Coagulation factor XIa heavy chain; Coagulation factor XIa light chain]
ruditapes_c5176	proteolysis	protein metabolism	P	Coagulation factor XI (FXI) (EC 3.4.21.27) (Plasma thromboplastin antecedent) (PTA) [Cleaved into: Coagulation factor XIa heavy chain; Coagulation factor XIa light chain]
ruditapes_c5176	blood coagulation	stress response	P	Coagulation factor XI (FXI) (EC 3.4.21.27) (Plasma thromboplastin antecedent) (PTA) [Cleaved into: Coagulation factor XIa heavy chain; Coagulation factor XIa light chain]
ruditapes_c5176	plasminogen activation	protein metabolism	P	Coagulation factor XI (FXI) (EC 3.4.21.27) (Plasma thromboplastin antecedent) (PTA) [Cleaved into: Coagulation factor XIa heavy chain; Coagulation factor XIa light chain]
ruditapes_c5176	regulation of blood coagulation	stress response	P	Coagulation factor XI (FXI) (EC 3.4.21.27) (Plasma thromboplastin antecedent) (PTA) [Cleaved into: Coagulation factor XIa heavy chain; Coagulation factor XIa light chain]
ruditapes_c18133	protein transport	transport	P	Importin-9 (Imp9) (Importin-9a) (Imp9a) (Importin-9b) (Imp9b) (Ran-binding protein 9) (RanBP9)
ruditapes_c18133	intracellular protein transport	transport	P	Importin-9 (Imp9) (Importin-9a) (Imp9a) (Importin-9b) (Imp9b) (Ran-binding protein 9) (RanBP9)
ruditapes_c18133	transport	transport	P	Importin-9 (Imp9) (Importin-9a) (Imp9a) (Importin-9b) (Imp9b) (Ran-binding protein 9) (RanBP9)
ruditapes_c3146	forebrain development	developmental processes	P	Rho GTPase-activating protein 35 (Glucocorticoid receptor DNA-binding factor 1)
ruditapes_c3146	neural tube closure	developmental processes	P	Rho GTPase-activating protein 35 (Glucocorticoid receptor DNA-binding factor 1)
ruditapes_c3146	small GTPase mediated signal transduction	signal transduction	P	Rho GTPase-activating protein 35 (Glucocorticoid receptor DNA-binding factor 1)
ruditapes_c3146	camera-type eye development	developmental processes	P	Rho GTPase-activating protein 35 (Glucocorticoid receptor DNA-binding factor 1)
ruditapes_c3146	regulation of cell shape	cell organization and biogenesis	P	Rho GTPase-activating protein 35 (Glucocorticoid receptor DNA-binding factor 1)
ruditapes_c3146	signal transduction	signal transduction	P	Rho GTPase-activating protein 35 (Glucocorticoid receptor DNA-binding factor 1)
ruditapes_c3146	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Rho GTPase-activating protein 35 (Glucocorticoid receptor DNA-binding factor 1)
ruditapes_c3146	integrin-mediated signaling pathway	signal transduction	P	Rho GTPase-activating protein 35 (Glucocorticoid receptor DNA-binding factor 1)
ruditapes_c3146	negative regulation of vascular permeability	other biological processes	P	Rho GTPase-activating protein 35 (Glucocorticoid receptor DNA-binding factor 1)
ruditapes_c3146	"transcription, DNA-dependent"	RNA metabolism	P	Rho GTPase-activating protein 35 (Glucocorticoid receptor DNA-binding factor 1)
ruditapes_c3146	positive regulation of GTPase activity	other biological processes	P	Rho GTPase-activating protein 35 (Glucocorticoid receptor DNA-binding factor 1)
ruditapes_c35099	oxidation reduction	other metabolic processes	P	"L-2-hydroxyglutarate dehydrogenase, mitochondrial (EC 1.1.99.2) (Duranin)"
ruditapes_c35099	cellular protein metabolic process	protein metabolism	P	"L-2-hydroxyglutarate dehydrogenase, mitochondrial (EC 1.1.99.2) (Duranin)"
ruditapes_c20673	carbohydrate metabolic process	other metabolic processes	P	"Beta-1,4-galactosyltransferase 3 (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3) (EC 2.4.1.-) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 3) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 3) [Includes: N-acetyllactosamine synthase (EC 2.4.1.90) (Nal synthase); Beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase (EC 2.4.1.38); Beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase (EC 2.4.1.-)]"
ruditapes_c20673	biological_process	other biological processes	P	"Beta-1,4-galactosyltransferase 3 (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3) (EC 2.4.1.-) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 3) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 3) [Includes: N-acetyllactosamine synthase (EC 2.4.1.90) (Nal synthase); Beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase (EC 2.4.1.38); Beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase (EC 2.4.1.-)]"
ruditapes_c30161	metabolic process	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c30161	oxidation reduction	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c30161	excretion	transport	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c6916	neurotransmitter secretion	transport	P	Liprin-alpha-3 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-3) (PTPRF-interacting protein alpha-3)
ruditapes_c6916	neurotransmitter secretion	cell-cell signaling	P	Liprin-alpha-3 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-3) (PTPRF-interacting protein alpha-3)
ruditapes_c6916	regulation of short-term neuronal synaptic plasticity	cell-cell signaling	P	Liprin-alpha-3 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-3) (PTPRF-interacting protein alpha-3)
ruditapes_c18278	steroid biosynthetic process	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes_c18278	oxidation reduction	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes_c24463	G-protein coupled receptor protein signaling pathway	signal transduction	P	Mas-related G-protein coupled receptor member G (Evolutionary breakpoint transcript 2 protein)
ruditapes_c24463	biological_process	other biological processes	P	Mas-related G-protein coupled receptor member G (Evolutionary breakpoint transcript 2 protein)
ruditapes_c24463	signal transduction	signal transduction	P	Mas-related G-protein coupled receptor member G (Evolutionary breakpoint transcript 2 protein)
ruditapes_c6680	signal transduction	signal transduction	P	Mas-related G-protein coupled receptor member B3
ruditapes_c6680	biological_process	other biological processes	P	Mas-related G-protein coupled receptor member B3
ruditapes_c6680	G-protein coupled receptor protein signaling pathway	signal transduction	P	Mas-related G-protein coupled receptor member B3
ruditapes_c23751	negative regulation of oxidoreductase activity	other biological processes	P	"Trimethyllysine dioxygenase, mitochondrial (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML hydroxylase) (TML-alpha-ketoglutarate dioxygenase) (TML dioxygenase) (TMLD)"
ruditapes_c23751	oxidation reduction	other metabolic processes	P	"Trimethyllysine dioxygenase, mitochondrial (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML hydroxylase) (TML-alpha-ketoglutarate dioxygenase) (TML dioxygenase) (TMLD)"
ruditapes_c23751	carnitine biosynthetic process	other metabolic processes	P	"Trimethyllysine dioxygenase, mitochondrial (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML hydroxylase) (TML-alpha-ketoglutarate dioxygenase) (TML dioxygenase) (TMLD)"
ruditapes_c4922	protein amino acid phosphorylation	protein metabolism	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	lymphangiogenesis	developmental processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	blood vessel morphogenesis	developmental processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	lymph vessel development	developmental processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	vasculature development	developmental processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	regulation of blood vessel remodeling	developmental processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	phosphorylation	other metabolic processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	positive regulation of cell growth	other biological processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	vascular endothelial growth factor receptor signaling pathway	signal transduction	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	sprouting angiogenesis	developmental processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	positive regulation of cell proliferation	cell cycle and proliferation	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c4922	angiogenesis	developmental processes	P	Vascular endothelial growth factor receptor 3 (VEGFR-3) (EC 2.7.10.1) (Fms-like tyrosine kinase 4) (FLT-4) (Tyrosine-protein kinase receptor FLT4)
ruditapes_c19172	biological_process	other biological processes	P	Ankyrin repeat and SOCS box protein 10 (ASB-10)
ruditapes2_c1126	endocytosis	transport	P	CD209 antigen-like protein D (DC-SIGN-related protein 3) (DC-SIGNR3) (CD antigen CD209)
ruditapes2_c1126	endocytosis	cell organization and biogenesis	P	CD209 antigen-like protein D (DC-SIGN-related protein 3) (DC-SIGNR3) (CD antigen CD209)
ruditapes_c3210	biological_process	other biological processes	P	CD209 antigen-like protein C (DC-SIGN-related protein 2) (DC-SIGNR2) (CD antigen CD209)
ruditapes2_c4569	translation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes2_c1686	translational elongation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes2_c1	translation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes2_c4569	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes2_c1	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes2_c4569	translational elongation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes2_c1686	translation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes2_c1686	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes2_c1	translational elongation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha)
ruditapes_c30181	neurotransmitter catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c30181	neurotransmitter catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c30181	acetylcholine catabolic process in synaptic cleft	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c30181	acetylcholine catabolic process in synaptic cleft	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c968	proteolysis	protein metabolism	P	Zinc metalloproteinase-disintegrin atrolysin-A (EC 3.4.24.1) (Alpha-proteinase) (Hemorrhagic toxin A) (HT-A) (Snake venom metalloproteinase) (SVMP) (Fragment)
ruditapes_c23462	oxidation reduction	other metabolic processes	P	Cytochrome P450 2K1 (EC 1.14.14.1) (CYPIIK1) (Cytochrome P450 LMC2)
ruditapes2_c505	transport	transport	P	Thioredoxin-like protein 1 (Thioredoxin-related protein)
ruditapes2_c505	glycerol ether metabolic process	other metabolic processes	P	Thioredoxin-like protein 1 (Thioredoxin-related protein)
ruditapes_c4101	electron transport chain	other metabolic processes	P	Thioredoxin-like protein 1 (Thioredoxin-related protein)
ruditapes2_c505	cell redox homeostasis	other biological processes	P	Thioredoxin-like protein 1 (Thioredoxin-related protein)
ruditapes2_c505	electron transport chain	other metabolic processes	P	Thioredoxin-like protein 1 (Thioredoxin-related protein)
ruditapes_c4101	cell redox homeostasis	other biological processes	P	Thioredoxin-like protein 1 (Thioredoxin-related protein)
ruditapes_c4101	glycerol ether metabolic process	other metabolic processes	P	Thioredoxin-like protein 1 (Thioredoxin-related protein)
ruditapes_c4101	transport	transport	P	Thioredoxin-like protein 1 (Thioredoxin-related protein)
ruditapes_s39378	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33288	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4817	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s39378	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38133	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38280	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4769	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33954	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s37360	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33288	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4769	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s36022	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc32470	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s35149	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4372	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4769	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s36022	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4372	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc36212	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33241	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33288	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc36212	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33241	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4372	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38280	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4604	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33288	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4769	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s36022	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c23601	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38133	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c23601	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s35149	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c23601	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38133	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s35149	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4604	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s39378	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s35149	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s37360	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33954	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33241	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38133	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33241	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4769	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc36212	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4372	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c19018	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc32470	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s39378	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4817	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33288	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33241	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s39378	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c23601	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38280	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c19018	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s39378	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4604	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38280	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc32470	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33954	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c19018	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4817	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s37360	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc36212	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38280	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38280	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4817	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s36022	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc36212	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c23601	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33954	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4769	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c19018	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s39378	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc32470	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33954	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38280	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc32470	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33954	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc36212	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s37360	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4604	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s37360	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s36022	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4372	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33241	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33954	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4817	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c19018	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4604	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c23601	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4769	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc32470	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33288	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4817	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c19018	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s37360	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33241	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4604	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc36212	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c23601	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s37360	xylulose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s36022	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4372	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s36022	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc32470	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s35149	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_lrc33288	carbohydrate metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38133	D-xylose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s35149	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38133	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s38133	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4817	protein homotetramerization	cell organization and biogenesis	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c19018	metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4604	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_s35149	oxidation reduction	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes2_lrc4372	glucose metabolic process	other metabolic processes	P	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase)
ruditapes_c33779	stem cell development	other biological processes	P	RNA-binding protein Musashi homolog 2 (Musashi-2)
ruditapes_c182	stem cell development	other biological processes	P	RNA-binding protein Musashi homolog 2 (Musashi-2)
ruditapes2_c1875	oxidation reduction	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYP1A2) (CYPIA1)
ruditapes_c28335	oxidation reduction	other metabolic processes	P	Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX) (Cytochrome P-450AROM) (Estrogen synthase)
ruditapes_c23083	oxidation reduction	other metabolic processes	P	Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX) (Cytochrome P-450AROM) (Estrogen synthase)
ruditapes_c28009	cation transport	transport	P	Solute carrier family 41 member 3
ruditapes_c28009	biological_process	other biological processes	P	Solute carrier family 41 member 3
ruditapes_c11706	fatty acid biosynthetic process	other metabolic processes	P	Putative fatty acid synthase subunit TOXC [Includes: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] malonyltransferase (EC 2.3.1.39); S-acyl fatty acid synthase thioesterase (EC 3.1.2.14)]
ruditapes_c11706	oxidation reduction	other metabolic processes	P	Putative fatty acid synthase subunit TOXC [Includes: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] malonyltransferase (EC 2.3.1.39); S-acyl fatty acid synthase thioesterase (EC 3.1.2.14)]
ruditapes_c11706	metabolic process	other metabolic processes	P	Putative fatty acid synthase subunit TOXC [Includes: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] malonyltransferase (EC 2.3.1.39); S-acyl fatty acid synthase thioesterase (EC 3.1.2.14)]
ruditapes_c11706	lipid biosynthetic process	other metabolic processes	P	Putative fatty acid synthase subunit TOXC [Includes: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] malonyltransferase (EC 2.3.1.39); S-acyl fatty acid synthase thioesterase (EC 3.1.2.14)]
ruditapes_lrc34339	purine nucleoside metabolic process	other metabolic processes	P	O-acetyl-ADP-ribose deacetylase MACROD1 (EC 3.5.1.-) (MACRO domain-containing protein 1) (Protein LRP16)
ruditapes_c31728	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase TRAF7 (EC 6.3.2.-) (TNF receptor-associated factor 7)
ruditapes_c31728	apoptosis	death	P	E3 ubiquitin-protein ligase TRAF7 (EC 6.3.2.-) (TNF receptor-associated factor 7)
ruditapes_c31728	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRAF7 (EC 6.3.2.-) (TNF receptor-associated factor 7)
ruditapes_c31728	regulation of apoptosis	death	P	E3 ubiquitin-protein ligase TRAF7 (EC 6.3.2.-) (TNF receptor-associated factor 7)
ruditapes_c31728	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRAF7 (EC 6.3.2.-) (TNF receptor-associated factor 7)
ruditapes_c31728	activation of MAPKKK activity	signal transduction	P	E3 ubiquitin-protein ligase TRAF7 (EC 6.3.2.-) (TNF receptor-associated factor 7)
ruditapes_c31728	activation of MAPKKK activity	other metabolic processes	P	E3 ubiquitin-protein ligase TRAF7 (EC 6.3.2.-) (TNF receptor-associated factor 7)
ruditapes_c9449	protein ubiquitination	protein metabolism	P	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 (mBACURD3) (BTB/POZ domain-containing protein KCTD10)
ruditapes_c9449	biological_process	other biological processes	P	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 (mBACURD3) (BTB/POZ domain-containing protein KCTD10)
ruditapes_c9449	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 (mBACURD3) (BTB/POZ domain-containing protein KCTD10)
ruditapes_c7585	biological_process	other biological processes	P	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 (mBACURD3) (BTB/POZ domain-containing protein KCTD10)
ruditapes_c7585	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 (mBACURD3) (BTB/POZ domain-containing protein KCTD10)
ruditapes_c9449	potassium ion transport	transport	P	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 (mBACURD3) (BTB/POZ domain-containing protein KCTD10)
ruditapes_c7585	protein ubiquitination	protein metabolism	P	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 (mBACURD3) (BTB/POZ domain-containing protein KCTD10)
ruditapes_c7585	potassium ion transport	transport	P	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 (mBACURD3) (BTB/POZ domain-containing protein KCTD10)
ruditapes_c28300	phosphorylation	other metabolic processes	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	epithelial tube morphogenesis	developmental processes	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	peptidyl-serine phosphorylation	protein metabolism	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	cell-substrate adhesion	cell adhesion	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	cell differentiation	other biological processes	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	myeloid cell differentiation	developmental processes	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	angiogenesis	developmental processes	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	protein amino acid autophosphorylation	protein metabolism	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	endothelial cell proliferation	cell cycle and proliferation	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	regulation of cell adhesion	cell adhesion	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	regulation of cell migration	other biological processes	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	cell adhesion	cell adhesion	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	protein amino acid phosphorylation	protein metabolism	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	multicellular organismal development	developmental processes	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c28300	endothelial cell migration	other biological processes	P	cAMP-dependent protein kinase catalytic subunit PRKX (PrKX) (Protein kinase X) (Protein kinase X-linked) (Serine/threonine-protein kinase PRKX) (EC 2.7.11.1) (PKA-related protein kinase)
ruditapes_c21557	biological_process	other biological processes	P	Tripartite motif-containing protein 59 (RING finger protein 1)
ruditapes2_lrc4690	sporulation resulting in formation of a cellular spore	other biological processes	P	Meiotically up-regulated gene 79 protein
ruditapes2_lrc4690	regulation of ARF protein signal transduction	signal transduction	P	Meiotically up-regulated gene 79 protein
ruditapes2_lrc4690	meiosis	cell cycle and proliferation	P	Meiotically up-regulated gene 79 protein
ruditapes2_lrc4690	ascospore formation	other biological processes	P	Meiotically up-regulated gene 79 protein
ruditapes_lrc27610	translation	protein metabolism	P	60S ribosomal protein L29 (L43)
ruditapes_c8419	transmembrane calcium ion transport	transport	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Channel-kinase 1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_c8419	transmembrane transport	transport	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Channel-kinase 1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_c8419	protein amino acid autophosphorylation	protein metabolism	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Channel-kinase 1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_c8419	ion transport	transport	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Channel-kinase 1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_c8419	phosphorylation	other metabolic processes	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Channel-kinase 1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_c8419	actomyosin structure organization	cell organization and biogenesis	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Channel-kinase 1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_c8419	protein amino acid phosphorylation	protein metabolism	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Channel-kinase 1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_c8419	calcium ion transport	transport	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Channel-kinase 1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_c8419	transport	transport	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Channel-kinase 1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_c8419	calcium-dependent cell-matrix adhesion	cell adhesion	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Channel-kinase 1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_c18583	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 12, axonemal (Bm259)"
ruditapes_c18583	microtubule-based movement	other biological processes	P	"Dynein heavy chain 12, axonemal (Bm259)"
ruditapes_c22251	biological_process	other biological processes	P	CUB and sushi domain-containing protein 1 (CUB and sushi multiple domains protein 1)
ruditapes_c13682	biological_process	other biological processes	P	CUB and sushi domain-containing protein 1 (CUB and sushi multiple domains protein 1)
ruditapes_c15501	metabolic process	other metabolic processes	P	"Exoglucanase (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Beta-glucancellobiohydrolase) (Exocellobiohydrolase)"
ruditapes_c15501	polysaccharide catabolic process	other metabolic processes	P	"Exoglucanase (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Beta-glucancellobiohydrolase) (Exocellobiohydrolase)"
ruditapes_c15501	carbohydrate metabolic process	other metabolic processes	P	"Exoglucanase (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Beta-glucancellobiohydrolase) (Exocellobiohydrolase)"
ruditapes_c15501	cellulose catabolic process	other metabolic processes	P	"Exoglucanase (EC 3.2.1.91) (1,4-beta-cellobiohydrolase) (Beta-glucancellobiohydrolase) (Exocellobiohydrolase)"
ruditapes2_c2218	metabolic process	other metabolic processes	P	Acid sphingomyelinase-like phosphodiesterase 3a (ASM-like phosphodiesterase 3a) (EC 3.1.4.-)
ruditapes2_c2218	biological_process	other biological processes	P	Acid sphingomyelinase-like phosphodiesterase 3a (ASM-like phosphodiesterase 3a) (EC 3.1.4.-)
ruditapes2_c2218	sphingomyelin catabolic process	other metabolic processes	P	Acid sphingomyelinase-like phosphodiesterase 3a (ASM-like phosphodiesterase 3a) (EC 3.1.4.-)
ruditapes_c13019	metabolic process	other metabolic processes	P	Acid sphingomyelinase-like phosphodiesterase 3b (ASM-like phosphodiesterase 3b) (EC 3.1.4.-)
ruditapes_c13019	sphingomyelin catabolic process	other metabolic processes	P	Acid sphingomyelinase-like phosphodiesterase 3b (ASM-like phosphodiesterase 3b) (EC 3.1.4.-)
ruditapes_lrc31388	ion transport	transport	P	Solute carrier family 12 member 6 (Electroneutral potassium-chloride cotransporter 3) (K-Cl cotransporter 3)
ruditapes_lrc31388	sodium ion transport	transport	P	Solute carrier family 12 member 6 (Electroneutral potassium-chloride cotransporter 3) (K-Cl cotransporter 3)
ruditapes_lrc31388	chloride transport	transport	P	Solute carrier family 12 member 6 (Electroneutral potassium-chloride cotransporter 3) (K-Cl cotransporter 3)
ruditapes_lrc31388	transmembrane transport	transport	P	Solute carrier family 12 member 6 (Electroneutral potassium-chloride cotransporter 3) (K-Cl cotransporter 3)
ruditapes_lrc31388	transport	transport	P	Solute carrier family 12 member 6 (Electroneutral potassium-chloride cotransporter 3) (K-Cl cotransporter 3)
ruditapes_lrc31388	potassium ion transport	transport	P	Solute carrier family 12 member 6 (Electroneutral potassium-chloride cotransporter 3) (K-Cl cotransporter 3)
ruditapes_c27917	response to aluminum ion	other biological processes	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c27917	cellular protein complex assembly	cell organization and biogenesis	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c27917	aging	other biological processes	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c27917	cellular response to oxidative stress	stress response	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c27917	oxidation-dependent protein catabolic process	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c27917	response to hormone stimulus	other biological processes	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c27917	response to hypoxia	stress response	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c27917	protein homooligomerization	cell organization and biogenesis	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c27917	mitochondrion organization	cell organization and biogenesis	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c27917	proteolysis	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c27917	misfolded or incompletely synthesized protein catabolic process	protein metabolism	P	"Lon protease homolog, mitochondrial (EC 3.4.21.-) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Serine protease 15)"
ruditapes_c27448	translation	protein metabolism	P	"28S ribosomal protein S2, mitochondrial (MRP-S2) (S2mt)"
ruditapes_c16586	positive regulation of cell-cell adhesion mediated by integrin	cell adhesion	P	Piezo-type mechanosensitive ion channel component 1 (Membrane protein induced by beta-amyloid treatment) (Mib) (Protein FAM38A)
ruditapes_c16586	ion transport	transport	P	Piezo-type mechanosensitive ion channel component 1 (Membrane protein induced by beta-amyloid treatment) (Mib) (Protein FAM38A)
ruditapes_c16586	positive regulation of integrin activation	protein metabolism	P	Piezo-type mechanosensitive ion channel component 1 (Membrane protein induced by beta-amyloid treatment) (Mib) (Protein FAM38A)
ruditapes_c16586	transport	transport	P	Piezo-type mechanosensitive ion channel component 1 (Membrane protein induced by beta-amyloid treatment) (Mib) (Protein FAM38A)
ruditapes_c26290	protein amino acid phosphorylation	protein metabolism	P	Tribbles homolog 2 (TRB-2)
ruditapes_c26290	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Tribbles homolog 2 (TRB-2)
ruditapes_c26290	negative regulation of interleukin-10 biosynthetic process	other metabolic processes	P	Tribbles homolog 2 (TRB-2)
ruditapes_c26290	regulation of MAP kinase activity	other metabolic processes	P	Tribbles homolog 2 (TRB-2)
ruditapes_c26290	negative regulation of fat cell differentiation	other biological processes	P	Tribbles homolog 2 (TRB-2)
ruditapes_c26290	negative regulation of protein kinase activity	other metabolic processes	P	Tribbles homolog 2 (TRB-2)
ruditapes_c21316	small GTPase mediated signal transduction	signal transduction	P	Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (M-Ras-regulated Rap GEF) (MR-GEF) (Related to Epac) (Repac)
ruditapes_c21316	nervous system development	developmental processes	P	Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (M-Ras-regulated Rap GEF) (MR-GEF) (Related to Epac) (Repac)
ruditapes_c21316	regulation of small GTPase mediated signal transduction	signal transduction	P	Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (M-Ras-regulated Rap GEF) (MR-GEF) (Related to Epac) (Repac)
ruditapes_c25102	multicellular organismal development	developmental processes	P	PHD finger protein 3
ruditapes_c25102	"transcription, DNA-dependent"	RNA metabolism	P	PHD finger protein 3
ruditapes_s35199	transmembrane calcium ion transport	transport	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_s35199	positive regulation of apoptosis	death	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_s35199	ion transport	transport	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_s35199	transport	transport	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_s35199	cellular magnesium ion homeostasis	other biological processes	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_s35199	phosphorylation	other metabolic processes	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_s35199	response to radiation	other biological processes	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_s35199	memory	other biological processes	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_s35199	protein amino acid phosphorylation	protein metabolism	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_s35199	calcium ion transport	transport	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_s35199	transmembrane transport	transport	P	Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) (Transient receptor potential-phospholipase C-interacting kinase) (TRP-PLIK)
ruditapes_c19599	sensory perception of taste	other biological processes	P	Taste receptor type 1 member 2 (G-protein coupled receptor 71) (Sweet taste receptor T1R2)
ruditapes_c19599	sensory perception of sweet taste	other biological processes	P	Taste receptor type 1 member 2 (G-protein coupled receptor 71) (Sweet taste receptor T1R2)
ruditapes_c19599	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 1 member 2 (G-protein coupled receptor 71) (Sweet taste receptor T1R2)
ruditapes_c19599	detection of chemical stimulus involved in sensory perception of sweet taste	other biological processes	P	Taste receptor type 1 member 2 (G-protein coupled receptor 71) (Sweet taste receptor T1R2)
ruditapes_c19599	signal transduction	signal transduction	P	Taste receptor type 1 member 2 (G-protein coupled receptor 71) (Sweet taste receptor T1R2)
ruditapes_c19599	response to stimulus	other biological processes	P	Taste receptor type 1 member 2 (G-protein coupled receptor 71) (Sweet taste receptor T1R2)
ruditapes_c26339	negative regulation of keratinocyte proliferation	cell cycle and proliferation	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	embryonic hemopoiesis	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	heart development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	androgen biosynthetic process	other metabolic processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	regulation of vitamin D receptor signaling pathway	signal transduction	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	mRNA transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	lactation	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	DNA replication	DNA metabolism	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	positive regulation of interferon-gamma-mediated signaling pathway	signal transduction	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	"positive regulation of protein import into nucleus, translocation"	transport	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	positive regulation of keratinocyte differentiation	other biological processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	in utero embryonic development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	embryonic hindlimb morphogenesis	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	keratinocyte differentiation	other biological processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	regulation of transcription from RNA polymerase I promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	organ morphogenesis	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	multicellular organismal development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	positive regulation of G0 to G1 transition	cell cycle and proliferation	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	cell morphogenesis	cell organization and biogenesis	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	embryonic heart tube development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	positive regulation of gene expression	other metabolic processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	embryonic placenta development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	erythrocyte development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	transcription initiation from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	organ regeneration	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	androgen receptor signaling pathway	signal transduction	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	brain development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	mammary gland epithelial cell proliferation	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	camera-type eye development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	lens development in camera-type eye	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	liver development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	thyroid hormone generation	other metabolic processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	angiogenesis	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	positive regulation of estrogen receptor signaling pathway	signal transduction	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	negative regulation of apoptosis	death	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	fat cell differentiation	other biological processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	mammary gland epithelial cell proliferation	cell cycle and proliferation	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	monocyte differentiation	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	positive regulation of mammary gland epithelial cell proliferation	cell cycle and proliferation	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	positive regulation of mammary gland epithelial cell proliferation	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	negative regulation of neuron differentiation	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	steroid hormone receptor signaling pathway	signal transduction	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes_c26339	enucleate erythrocyte development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 1 (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2)
ruditapes2_c3613	interspecies interaction between organisms	other biological processes	P	Carcinoembryonic antigen-related cell adhesion molecule 2 (CEA-related cell adhesion molecule 2) (Biliary glycoprotein 2) (BGP-2)
ruditapes2_c3613	biological_process	other biological processes	P	Carcinoembryonic antigen-related cell adhesion molecule 2 (CEA-related cell adhesion molecule 2) (Biliary glycoprotein 2) (BGP-2)
ruditapes_c11802	protein amino acid O-linked glycosylation	protein metabolism	P	Polypeptide N-acetylgalactosaminyltransferase 10 (EC 2.4.1.41) (Polypeptide GalNAc transferase 10) (GalNAc-T10) (pp-GaNTase 10) (Protein-UDP acetylgalactosaminyltransferase 10) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 10)
ruditapes_c16780	endoplasmic reticulum unfolded protein response	signal transduction	P	ER degradation-enhancing alpha-mannosidase-like protein 1
ruditapes_c16780	endoplasmic reticulum unfolded protein response	stress response	P	ER degradation-enhancing alpha-mannosidase-like protein 1
ruditapes_c16780	cellular protein metabolic process	protein metabolism	P	ER degradation-enhancing alpha-mannosidase-like protein 1
ruditapes_c16780	activation of signaling protein activity involved in unfolded protein response	signal transduction	P	ER degradation-enhancing alpha-mannosidase-like protein 1
ruditapes_c16780	activation of signaling protein activity involved in unfolded protein response	stress response	P	ER degradation-enhancing alpha-mannosidase-like protein 1
ruditapes_c16780	activation of signaling protein activity involved in unfolded protein response	other metabolic processes	P	ER degradation-enhancing alpha-mannosidase-like protein 1
ruditapes_c16780	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	ER degradation-enhancing alpha-mannosidase-like protein 1
ruditapes_c16780	post-translational protein modification	protein metabolism	P	ER degradation-enhancing alpha-mannosidase-like protein 1
ruditapes_c16780	protein folding	protein metabolism	P	ER degradation-enhancing alpha-mannosidase-like protein 1
ruditapes_c16780	response to unfolded protein	stress response	P	ER degradation-enhancing alpha-mannosidase-like protein 1
ruditapes_c16780	ER-associated protein catabolic process	protein metabolism	P	ER degradation-enhancing alpha-mannosidase-like protein 1
ruditapes2_c1823	mRNA transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	transmembrane transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	"protein import into nucleus, docking"	cell organization and biogenesis	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	protein transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	transmembrane transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	"protein import into nucleus, docking"	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	regulation of glucose transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	hexose transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	glucose transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	nucleocytoplasmic transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	nucleocytoplasmic transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	mRNA transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	viral reproduction	other biological processes	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	cytokine-mediated signaling pathway	signal transduction	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	carbohydrate metabolic process	other metabolic processes	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	viral reproduction	other biological processes	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	"protein import into nucleus, docking"	cell organization and biogenesis	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	protein transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	"protein import into nucleus, docking"	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	carbohydrate metabolic process	other metabolic processes	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	glucose transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c19484	regulation of glucose transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	cytokine-mediated signaling pathway	signal transduction	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes2_c1823	hexose transport	transport	P	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)
ruditapes_c10483	sex differentiation	other biological processes	P	Centromere protein I (CENP-I) (FSH primary response protein 1) (Follicle-stimulating hormone primary response protein) (Interphase centromere complex protein 19) (Leucine-rich primary response protein 1)
ruditapes_c10483	nucleosome assembly	cell organization and biogenesis	P	Centromere protein I (CENP-I) (FSH primary response protein 1) (Follicle-stimulating hormone primary response protein) (Interphase centromere complex protein 19) (Leucine-rich primary response protein 1)
ruditapes_c10483	CenH3-containing nucleosome assembly at centromere	cell organization and biogenesis	P	Centromere protein I (CENP-I) (FSH primary response protein 1) (Follicle-stimulating hormone primary response protein) (Interphase centromere complex protein 19) (Leucine-rich primary response protein 1)
ruditapes_c10483	mitotic cell cycle	cell cycle and proliferation	P	Centromere protein I (CENP-I) (FSH primary response protein 1) (Follicle-stimulating hormone primary response protein) (Interphase centromere complex protein 19) (Leucine-rich primary response protein 1)
ruditapes_c10483	M phase of mitotic cell cycle	cell cycle and proliferation	P	Centromere protein I (CENP-I) (FSH primary response protein 1) (Follicle-stimulating hormone primary response protein) (Interphase centromere complex protein 19) (Leucine-rich primary response protein 1)
ruditapes_c10483	follicle-stimulating hormone signaling pathway	signal transduction	P	Centromere protein I (CENP-I) (FSH primary response protein 1) (Follicle-stimulating hormone primary response protein) (Interphase centromere complex protein 19) (Leucine-rich primary response protein 1)
ruditapes_c10483	follicle-stimulating hormone signaling pathway	developmental processes	P	Centromere protein I (CENP-I) (FSH primary response protein 1) (Follicle-stimulating hormone primary response protein) (Interphase centromere complex protein 19) (Leucine-rich primary response protein 1)
ruditapes_c10483	mitotic prometaphase	cell cycle and proliferation	P	Centromere protein I (CENP-I) (FSH primary response protein 1) (Follicle-stimulating hormone primary response protein) (Interphase centromere complex protein 19) (Leucine-rich primary response protein 1)
ruditapes_c10483	mitotic prometaphase	cell organization and biogenesis	P	Centromere protein I (CENP-I) (FSH primary response protein 1) (Follicle-stimulating hormone primary response protein) (Interphase centromere complex protein 19) (Leucine-rich primary response protein 1)
ruditapes_c2869	regulation of actin filament polymerization	protein metabolism	P	Actin-related protein 2/3 complex subunit 1A (SOP2-like protein)
ruditapes_c2869	regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 1A (SOP2-like protein)
ruditapes_c2869	actin cytoskeleton organization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 1A (SOP2-like protein)
ruditapes_c7857	cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	negative regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	axon guidance	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	axon guidance	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	neuron adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	negative regulation of axon extension	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	"positive regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	positive regulation of transmission of nerve impulse	other biological processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	negative regulation of neuron projection development	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	negative regulation of neuron projection development	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	positive regulation of transmission of nerve impulse	other biological processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	axon guidance	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	axon guidance	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	negative regulation of axon extension	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	negative regulation of axon extension involved in regeneration	stress response	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	negative regulation of axon extension involved in regeneration	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	negative regulation of axon extension involved in regeneration	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	synapse organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	negative regulation of cell-cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	neuromuscular process controlling balance	other biological processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	negative regulation of cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	long-term synaptic potentiation	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	negative regulation of cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	neuron adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	negative regulation of axon extension	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	signal transduction	signal transduction	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	neuron adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	extracellular matrix organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	synapse organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	"positive regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	telencephalon cell migration	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	associative learning	other biological processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	axon guidance	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	axon guidance	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	negative regulation of cell-cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	telencephalon cell migration	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	negative regulation of neuron projection development	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	neuromuscular process controlling balance	other biological processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	negative regulation of cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	negative regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	negative regulation of axon extension involved in regeneration	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	negative regulation of axon extension involved in regeneration	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	telencephalon cell migration	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	synapse organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	negative regulation of cell-cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	negative regulation of neuron projection development	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	long-term synaptic potentiation	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	neuromuscular process controlling balance	other biological processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	negative regulation of neuron projection development	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	negative regulation of neuron projection development	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	extracellular matrix organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	negative regulation of axon extension involved in regeneration	stress response	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	negative regulation of axon extension involved in regeneration	stress response	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	negative regulation of axon extension involved in regeneration	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	negative regulation of axon extension involved in regeneration	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	long-term synaptic potentiation	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	associative learning	other biological processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	extracellular matrix organization	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	associative learning	other biological processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	cell adhesion	cell adhesion	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	negative regulation of axon extension	developmental processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	negative regulation of axon extension	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	"positive regulation of synaptic transmission, glutamatergic"	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	negative regulation of axon extension	cell organization and biogenesis	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c7857	signal transduction	signal transduction	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes2_c2452	positive regulation of transmission of nerve impulse	other biological processes	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	negative regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	regulation of synaptic transmission	cell-cell signaling	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c13026	signal transduction	signal transduction	P	Tenascin-R (TN-R) (Janusin) (Restrictin)
ruditapes_c20089	embryonic digit morphogenesis	developmental processes	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	cellular lipid metabolic process	other metabolic processes	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	histone acetylation	protein metabolism	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	histone acetylation	cell organization and biogenesis	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	response to hypoxia	stress response	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	homeostatic process	other biological processes	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	Notch signaling pathway	signal transduction	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	germ-line stem cell maintenance	other biological processes	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	"regulation of transcription, DNA-dependent"	RNA metabolism	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	"transcription, DNA-dependent"	RNA metabolism	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	signal transduction	signal transduction	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	regulation of smoothened signaling pathway	signal transduction	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	regulation of S phase	cell cycle and proliferation	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	protein complex assembly	cell organization and biogenesis	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	N-terminal peptidyl-lysine acetylation	protein metabolism	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	gene expression	other metabolic processes	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	innate immune response	stress response	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	interspecies interaction between organisms	other biological processes	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c20089	cell proliferation	cell cycle and proliferation	P	CREB-binding protein (EC 2.3.1.48)
ruditapes_c7012	cytokine biosynthetic process	other metabolic processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	signal peptide processing	protein metabolism	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	respiratory tube development	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	proteolysis	protein metabolism	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	heart development	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	cell-cell signaling	cell-cell signaling	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	embryonic skeletal system development	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	embryonic gut development	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	embryo implantation	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	limb morphogenesis	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	kidney development	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	female pregnancy	other biological processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	protein processing	protein metabolism	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	nerve growth factor processing	protein metabolism	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	anterior/posterior pattern formation	developmental processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	"viral assembly, maturation, egress, and release"	other biological processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	nerve growth factor receptor signaling pathway	signal transduction	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	peptide biosynthetic process	other metabolic processes	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	peptide hormone processing	protein metabolism	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c7012	renin secretion into blood stream	transport	P	Proprotein convertase subtilisin/kexin type 5 (EC 3.4.21.-) (Proprotein convertase 5) (PC5) (Proprotein convertase 6) (PC6) (hPC6) (Subtilisin/kexin-like protease PC5)
ruditapes_c14344	DNA recombination	DNA metabolism	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	response to DNA damage stimulus	stress response	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	reciprocal meiotic recombination	cell cycle and proliferation	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	reciprocal meiotic recombination	DNA metabolism	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	DNA repair	DNA metabolism	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	DNA duplex unwinding	DNA metabolism	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	telomere maintenance via telomerase	DNA metabolism	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	telomere maintenance via telomerase	cell organization and biogenesis	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	regulation of mitotic recombination	DNA metabolism	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	telomere maintenance	cell organization and biogenesis	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	double-strand break repair via homologous recombination	stress response	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	double-strand break repair via homologous recombination	DNA metabolism	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	double-strand break repair	stress response	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	double-strand break repair	DNA metabolism	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	DNA repair	stress response	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	positive regulation of kinase activity	other metabolic processes	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	telomere maintenance	DNA metabolism	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	cell cycle	cell cycle and proliferation	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	meiosis	cell cycle and proliferation	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c14344	positive regulation of protein amino acid autophosphorylation	protein metabolism	P	DNA repair protein RAD50 (hRAD50) (EC 3.6.-.-)
ruditapes_c8985	regulation of axonogenesis	developmental processes	P	Rho guanine nucleotide exchange factor 1 (115 kDa guanine nucleotide exchange factor) (p115-RhoGEF) (p115RhoGEF) (Sub1.5)
ruditapes_c8985	regulation of axonogenesis	cell organization and biogenesis	P	Rho guanine nucleotide exchange factor 1 (115 kDa guanine nucleotide exchange factor) (p115-RhoGEF) (p115RhoGEF) (Sub1.5)
ruditapes_c8985	negative regulation of axonogenesis	cell organization and biogenesis	P	Rho guanine nucleotide exchange factor 1 (115 kDa guanine nucleotide exchange factor) (p115-RhoGEF) (p115RhoGEF) (Sub1.5)
ruditapes_c8985	cell proliferation	cell cycle and proliferation	P	Rho guanine nucleotide exchange factor 1 (115 kDa guanine nucleotide exchange factor) (p115-RhoGEF) (p115RhoGEF) (Sub1.5)
ruditapes_c8985	nerve growth factor receptor signaling pathway	signal transduction	P	Rho guanine nucleotide exchange factor 1 (115 kDa guanine nucleotide exchange factor) (p115-RhoGEF) (p115RhoGEF) (Sub1.5)
ruditapes_c8985	positive regulation of GTPase activity	other biological processes	P	Rho guanine nucleotide exchange factor 1 (115 kDa guanine nucleotide exchange factor) (p115-RhoGEF) (p115RhoGEF) (Sub1.5)
ruditapes_c8985	Rho protein signal transduction	signal transduction	P	Rho guanine nucleotide exchange factor 1 (115 kDa guanine nucleotide exchange factor) (p115-RhoGEF) (p115RhoGEF) (Sub1.5)
ruditapes_c8985	regulation of Rho protein signal transduction	signal transduction	P	Rho guanine nucleotide exchange factor 1 (115 kDa guanine nucleotide exchange factor) (p115-RhoGEF) (p115RhoGEF) (Sub1.5)
ruditapes_c8985	negative regulation of axonogenesis	developmental processes	P	Rho guanine nucleotide exchange factor 1 (115 kDa guanine nucleotide exchange factor) (p115-RhoGEF) (p115RhoGEF) (Sub1.5)
ruditapes_c15566	skeletal system development	developmental processes	P	Ubiquitin fusion degradation protein 1 homolog (UB fusion protein 1)
ruditapes_c15566	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin fusion degradation protein 1 homolog (UB fusion protein 1)
ruditapes_c12413	proteolysis	protein metabolism	P	Aminopeptidase C (EC 3.4.22.40) (Bleomycin hydrolase)
ruditapes_c6896	activation of MAPKKK activity	signal transduction	P	Mitogen-activated protein kinase kinase kinase kinase 1 (EC 2.7.11.1) (Hematopoietic progenitor kinase) (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1)
ruditapes_c6896	activation of MAPKKK activity	other metabolic processes	P	Mitogen-activated protein kinase kinase kinase kinase 1 (EC 2.7.11.1) (Hematopoietic progenitor kinase) (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1)
ruditapes_c6896	protein kinase cascade	signal transduction	P	Mitogen-activated protein kinase kinase kinase kinase 1 (EC 2.7.11.1) (Hematopoietic progenitor kinase) (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1)
ruditapes_c6896	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase kinase kinase kinase 1 (EC 2.7.11.1) (Hematopoietic progenitor kinase) (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1)
ruditapes_c6896	peptidyl-serine phosphorylation	protein metabolism	P	Mitogen-activated protein kinase kinase kinase kinase 1 (EC 2.7.11.1) (Hematopoietic progenitor kinase) (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1)
ruditapes_c6896	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase kinase kinase kinase 1 (EC 2.7.11.1) (Hematopoietic progenitor kinase) (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1)
ruditapes_c6896	activation of JUN kinase activity	signal transduction	P	Mitogen-activated protein kinase kinase kinase kinase 1 (EC 2.7.11.1) (Hematopoietic progenitor kinase) (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1)
ruditapes_c6896	activation of JUN kinase activity	stress response	P	Mitogen-activated protein kinase kinase kinase kinase 1 (EC 2.7.11.1) (Hematopoietic progenitor kinase) (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1)
ruditapes_c6896	activation of JUN kinase activity	protein metabolism	P	Mitogen-activated protein kinase kinase kinase kinase 1 (EC 2.7.11.1) (Hematopoietic progenitor kinase) (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1)
ruditapes_c6896	response to stress	stress response	P	Mitogen-activated protein kinase kinase kinase kinase 1 (EC 2.7.11.1) (Hematopoietic progenitor kinase) (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1)
ruditapes_c10828	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase NEP1 (EC 2.1.1.-) (18S rRNA (pseudouridine-N1-)-methyltransferase NEP1) (18S rRNA Psi1248 methyltransferase) (Nucleolar protein EMG1 homolog) (Protein C2f) (Ribosome biogenesis protein NEP1)
ruditapes_c10828	ribosome biogenesis	other biological processes	P	Ribosomal RNA small subunit methyltransferase NEP1 (EC 2.1.1.-) (18S rRNA (pseudouridine-N1-)-methyltransferase NEP1) (18S rRNA Psi1248 methyltransferase) (Nucleolar protein EMG1 homolog) (Protein C2f) (Ribosome biogenesis protein NEP1)
ruditapes_c10828	ribosomal small subunit biogenesis	other biological processes	P	Ribosomal RNA small subunit methyltransferase NEP1 (EC 2.1.1.-) (18S rRNA (pseudouridine-N1-)-methyltransferase NEP1) (18S rRNA Psi1248 methyltransferase) (Nucleolar protein EMG1 homolog) (Protein C2f) (Ribosome biogenesis protein NEP1)
ruditapes_c10828	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase NEP1 (EC 2.1.1.-) (18S rRNA (pseudouridine-N1-)-methyltransferase NEP1) (18S rRNA Psi1248 methyltransferase) (Nucleolar protein EMG1 homolog) (Protein C2f) (Ribosome biogenesis protein NEP1)
ruditapes2_c155	tissue regeneration	stress response	P	Ninjurin-1 (Nerve injury-induced protein 1)
ruditapes2_c155	tissue regeneration	developmental processes	P	Ninjurin-1 (Nerve injury-induced protein 1)
ruditapes2_c155	nervous system development	developmental processes	P	Ninjurin-1 (Nerve injury-induced protein 1)
ruditapes2_c155	cell adhesion	cell adhesion	P	Ninjurin-1 (Nerve injury-induced protein 1)
ruditapes_c6791	branched chain family amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c6791	carboxylic acid metabolic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c6791	leucine biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c6791	cellular amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c24685	pantothenate biosynthetic process	other metabolic processes	P	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT)
ruditapes_c24685	methylation	other metabolic processes	P	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) (KPHMT)
ruditapes_c22542	protein peptidyl-prolyl isomerization	protein metabolism	P	Foldase protein PrsA 1 (EC 5.2.1.8)
ruditapes_c22542	protein folding	protein metabolism	P	Foldase protein PrsA 1 (EC 5.2.1.8)
ruditapes_c13559	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Serine-protein kinase RsbW (EC 2.7.11.1) (Anti-sigma-B factor) (Sigma-B negative effector RsbW)
ruditapes_c13559	phosphorylation	other metabolic processes	P	Serine-protein kinase RsbW (EC 2.7.11.1) (Anti-sigma-B factor) (Sigma-B negative effector RsbW)
ruditapes_c13559	protein amino acid phosphorylation	protein metabolism	P	Serine-protein kinase RsbW (EC 2.7.11.1) (Anti-sigma-B factor) (Sigma-B negative effector RsbW)
ruditapes_c21366	histidyl-tRNA aminoacylation	protein metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c21366	histidine biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c21366	histidyl-tRNA aminoacylation	RNA metabolism	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c21366	cellular amino acid biosynthetic process	other metabolic processes	P	ATP phosphoribosyltransferase regulatory subunit
ruditapes_c14443	"transcription, DNA-dependent"	RNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c14443	"DNA replication, synthesis of RNA primer"	DNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c14443	DNA replication	DNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes_c14443	"DNA replication, synthesis of RNA primer"	RNA metabolism	P	DNA primase (EC 2.7.7.-)
ruditapes2_c4445	cell division	other biological processes	P	DNA translocase FtsK
ruditapes2_c4445	cell cycle	cell cycle and proliferation	P	DNA translocase FtsK
ruditapes2_c4445	chromosome segregation	other biological processes	P	DNA translocase FtsK
ruditapes_s38998	phosphorylation	other metabolic processes	P	"Pyruvate, phosphate dikinase (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase)"
ruditapes_c9585	DNA topological change	DNA metabolism	P	DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) (Omega-protein) (Relaxing enzyme) (Swivelase) (Untwisting enzyme)
ruditapes_c14786	translation	protein metabolism	P	Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.-)
ruditapes_c24862	protein secretion by the type IV secretion system	transport	P	Uncharacterized protein RC0144
ruditapes2_c1607	oxidation reduction	other metabolic processes	P	"1,5-anhydro-D-fructose reductase (Anhydrofructose reductase) (EC 1.1.1.292) (1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming))"
ruditapes2_c1607	metabolic process	other metabolic processes	P	"1,5-anhydro-D-fructose reductase (Anhydrofructose reductase) (EC 1.1.1.292) (1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming))"
ruditapes_c26378	phosphorylation	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c26378	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c26378	dTDP biosynthetic process	other metabolic processes	P	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)
ruditapes_c21552	fatty acid biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_c21552	lipid biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_c21552	lipid A biosynthetic process	other metabolic processes	P	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC 4.2.1.59) ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase) ((3R)-hydroxymyristoyl-ACP dehydrase) (Beta-hydroxyacyl-ACP dehydratase)
ruditapes_lrc37495	regulation of cell shape	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_lrc37495	alanine metabolic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_lrc37495	peptidoglycan biosynthetic process	other metabolic processes	P	Alanine racemase (EC 5.1.1.1)
ruditapes_lrc37495	cell wall organization	cell organization and biogenesis	P	Alanine racemase (EC 5.1.1.1)
ruditapes_lrc30766	L-arabinose transport	transport	P	Arabinose import ATP-binding protein AraG (EC 3.6.3.17)
ruditapes_lrc30766	transport	transport	P	Arabinose import ATP-binding protein AraG (EC 3.6.3.17)
ruditapes_lrc30766	ATP catabolic process	other metabolic processes	P	Arabinose import ATP-binding protein AraG (EC 3.6.3.17)
ruditapes_lrc30766	carbohydrate transport	transport	P	Arabinose import ATP-binding protein AraG (EC 3.6.3.17)
ruditapes_c23671	transport	transport	P	Sulfate/thiosulfate import ATP-binding protein CysA 1 (EC 3.6.3.25) (Sulfate-transporting ATPase 1)
ruditapes_c23671	ATP catabolic process	other metabolic processes	P	Sulfate/thiosulfate import ATP-binding protein CysA 1 (EC 3.6.3.25) (Sulfate-transporting ATPase 1)
ruditapes_c23671	sulfate transport	transport	P	Sulfate/thiosulfate import ATP-binding protein CysA 1 (EC 3.6.3.25) (Sulfate-transporting ATPase 1)
ruditapes_c14341	carbohydrate metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (Nodulation protein M)
ruditapes_c14341	carbohydrate biosynthetic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (Nodulation protein M)
ruditapes_c14341	glutamine metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (Nodulation protein M)
ruditapes_c14341	nodulation	other biological processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (Nodulation protein M)
ruditapes_c14341	metabolic process	other metabolic processes	P	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (GFAT) (EC 2.6.1.16) (Nodulation protein M)
ruditapes2_c6976	cell cycle	cell cycle and proliferation	P	Enhancer of rudimentary homolog
ruditapes_s39276	cell cycle	cell cycle and proliferation	P	Enhancer of rudimentary homolog
ruditapes_c3008	cell cycle	cell cycle and proliferation	P	Enhancer of rudimentary homolog
ruditapes_lrc11048	signal transduction	signal transduction	P	Probable G-protein coupled receptor No18
ruditapes_lrc11048	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor No18
ruditapes_c25838	transport	transport	P	Acetylcholine receptor subunit beta-type acr-3
ruditapes_c25838	ion transport	transport	P	Acetylcholine receptor subunit beta-type acr-3
ruditapes_c27484	positive regulation of growth rate	other biological processes	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	reproduction	other biological processes	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	potassium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	positive regulation of multicellular organism growth	other biological processes	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	nematode larval development	developmental processes	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	body morphogenesis	other biological processes	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	oogenesis	other biological processes	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	locomotion	other biological processes	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	receptor-mediated endocytosis	transport	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	receptor-mediated endocytosis	cell organization and biogenesis	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	growth	other biological processes	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	embryonic development ending in birth or egg hatching	developmental processes	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	sodium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_c27484	ATP metabolic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1)
ruditapes_lrc39924	proteolysis	protein metabolism	P	Zinc metalloproteinase nas-37 (EC 3.4.24.21) (Nematode astacin 37)
ruditapes_lrc39924	"ecdysis, collagen and cuticulin-based cuticle"	other biological processes	P	Zinc metalloproteinase nas-37 (EC 3.4.24.21) (Nematode astacin 37)
ruditapes_lrc39924	collagen and cuticulin-based cuticle development	developmental processes	P	Zinc metalloproteinase nas-37 (EC 3.4.24.21) (Nematode astacin 37)
ruditapes_lrc39924	body morphogenesis	other biological processes	P	Zinc metalloproteinase nas-37 (EC 3.4.24.21) (Nematode astacin 37)
ruditapes_lrc39924	multicellular organismal development	developmental processes	P	Zinc metalloproteinase nas-37 (EC 3.4.24.21) (Nematode astacin 37)
ruditapes_lrc39924	"molting cycle, collagen and cuticulin-based cuticle"	other biological processes	P	Zinc metalloproteinase nas-37 (EC 3.4.24.21) (Nematode astacin 37)
ruditapes_lrc39924	negative regulation of multicellular organism growth	other biological processes	P	Zinc metalloproteinase nas-37 (EC 3.4.24.21) (Nematode astacin 37)
ruditapes2_c1715	positive regulation of growth rate	other biological processes	P	"Putative 28S ribosomal protein S5, mitochondrial"
ruditapes2_c1715	embryonic development ending in birth or egg hatching	developmental processes	P	"Putative 28S ribosomal protein S5, mitochondrial"
ruditapes2_c1715	nematode larval development	developmental processes	P	"Putative 28S ribosomal protein S5, mitochondrial"
ruditapes2_c1715	receptor-mediated endocytosis	cell organization and biogenesis	P	"Putative 28S ribosomal protein S5, mitochondrial"
ruditapes2_c1715	growth	other biological processes	P	"Putative 28S ribosomal protein S5, mitochondrial"
ruditapes2_c1715	receptor-mediated endocytosis	transport	P	"Putative 28S ribosomal protein S5, mitochondrial"
ruditapes2_c1715	translation	protein metabolism	P	"Putative 28S ribosomal protein S5, mitochondrial"
ruditapes2_lrc4461	nematode larval development	developmental processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc3622	reproduction	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc3622	locomotion	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes_lrc32151	locomotion	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes_lrc32151	reproduction	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc3622	embryonic development ending in birth or egg hatching	developmental processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc4461	growth	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes_lrc32151	embryonic development ending in birth or egg hatching	developmental processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc4461	locomotion	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc4461	receptor-mediated endocytosis	transport	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc4461	receptor-mediated endocytosis	cell organization and biogenesis	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc4461	reproduction	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc3622	nematode larval development	developmental processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes_lrc32151	positive regulation of growth rate	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc3622	positive regulation of growth rate	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes_lrc32151	receptor-mediated endocytosis	cell organization and biogenesis	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc4461	embryonic development ending in birth or egg hatching	developmental processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes_lrc32151	nematode larval development	developmental processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc3622	growth	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc4461	positive regulation of growth rate	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes_lrc32151	growth	other biological processes	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc3622	receptor-mediated endocytosis	transport	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes2_lrc3622	receptor-mediated endocytosis	cell organization and biogenesis	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes_lrc32151	receptor-mediated endocytosis	transport	P	Translationally-controlled tumor protein homolog (TCTP)
ruditapes_c22984	positive regulation of growth rate	other biological processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	gonad development	developmental processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	embryonic development ending in birth or egg hatching	developmental processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	regulation of meiosis	cell cycle and proliferation	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	determination of adult life span	developmental processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	regulation of cell proliferation	cell cycle and proliferation	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	morphogenesis of an epithelium	developmental processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	RNA interference	other metabolic processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	feminization of hermaphroditic germ-line	developmental processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	mRNA capping	RNA metabolism	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	hermaphrodite genitalia development	developmental processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	RNA splicing	RNA metabolism	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	receptor-mediated endocytosis	transport	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	receptor-mediated endocytosis	cell organization and biogenesis	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	gene silencing by RNA	other metabolic processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	reproduction	other biological processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	mRNA processing	RNA metabolism	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	cell migration	other biological processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	nematode larval development	developmental processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	growth	other biological processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes_c22984	germ cell development	other biological processes	P	Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
ruditapes2_c641	determination of adult life span	developmental processes	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	embryonic development ending in birth or egg hatching	developmental processes	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	hermaphrodite genitalia development	developmental processes	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	reproduction	other biological processes	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	tricarboxylic acid cycle	other metabolic processes	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	receptor-mediated endocytosis	transport	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	oxidation reduction	other metabolic processes	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	receptor-mediated endocytosis	cell organization and biogenesis	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	positive regulation of growth rate	other biological processes	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	embryonic development	developmental processes	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	RNA interference	other metabolic processes	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	locomotion	other biological processes	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes2_c641	body morphogenesis	other biological processes	P	"Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)"
ruditapes_c30922	transmembrane transport	transport	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes2_c2881	ion transport	transport	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes2_c2881	mitosis	cell cycle and proliferation	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes2_c2881	mitosis	cell organization and biogenesis	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes_c30922	mitotic cell cycle	cell cycle and proliferation	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes2_c2881	reproduction	other biological processes	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes2_c2881	mitotic cell cycle	cell cycle and proliferation	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes_c30922	transport	transport	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes2_c2881	hermaphrodite genitalia development	developmental processes	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes_c30922	hermaphrodite genitalia development	developmental processes	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes2_c2881	transmembrane transport	transport	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes_c30922	reproduction	other biological processes	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes_c30922	ion transport	transport	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes2_c2881	transport	transport	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes2_c2881	gonad development	developmental processes	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes_c30922	mitosis	cell cycle and proliferation	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes_c30922	mitosis	cell organization and biogenesis	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes_c30922	gonad development	developmental processes	P	Transient receptor potential channel (Abnormal gonad development protein 2)
ruditapes_c25265	signal transduction	signal transduction	P	Sensor histidine kinase MtrB (EC 2.7.13.3)
ruditapes_c25265	peptidyl-histidine phosphorylation	protein metabolism	P	Sensor histidine kinase MtrB (EC 2.7.13.3)
ruditapes_c25265	two-component signal transduction system (phosphorelay)	signal transduction	P	Sensor histidine kinase MtrB (EC 2.7.13.3)
ruditapes_c25265	phosphorylation	other metabolic processes	P	Sensor histidine kinase MtrB (EC 2.7.13.3)
ruditapes_c19310	metabolic process	other metabolic processes	P	Beta-galactosidase III (Beta-gal) (EC 3.2.1.23)
ruditapes_c19310	carbohydrate metabolic process	other metabolic processes	P	Beta-galactosidase III (Beta-gal) (EC 3.2.1.23)
ruditapes_c18115	oxidation reduction	other metabolic processes	P	Ferredoxin--NADP reductase (FNR) (EC 1.18.1.2)
ruditapes_c26815	oxidation reduction	other metabolic processes	P	Ectoine hydroxylase (EC 1.17.-.-)
ruditapes_c14478	oxidation reduction	other metabolic processes	P	Ectoine hydroxylase (EC 1.17.-.-)
ruditapes_lrc32962	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Probable molybdenum cofactor guanylyltransferase (MoCo guanylyltransferase) (EC 2.7.7.77) (GTP:molybdopterin guanylyltransferase) (Mo-MPT guanylyltransferase) (Molybdopterin guanylyltransferase) (Molybdopterin-guanine dinucleotide synthase) (MGD synthase)
ruditapes_c19175	phosphorylation	other metabolic processes	P	Phosphoenolpyruvate carboxylase kinase 2 (AtPPCK2) (EC 2.7.11.1)
ruditapes_c19175	cellular response to phosphate starvation	stress response	P	Phosphoenolpyruvate carboxylase kinase 2 (AtPPCK2) (EC 2.7.11.1)
ruditapes_c19175	response to cycloheximide	other biological processes	P	Phosphoenolpyruvate carboxylase kinase 2 (AtPPCK2) (EC 2.7.11.1)
ruditapes_c19175	response to light stimulus	other biological processes	P	Phosphoenolpyruvate carboxylase kinase 2 (AtPPCK2) (EC 2.7.11.1)
ruditapes_c19175	protein amino acid phosphorylation	protein metabolism	P	Phosphoenolpyruvate carboxylase kinase 2 (AtPPCK2) (EC 2.7.11.1)
ruditapes_c10302	polar nucleus fusion	developmental processes	P	Selenium-binding protein 2 (Protein EMBRYO SAC DEVELOPMENT ARREST 38)
ruditapes_c10302	polar nucleus fusion	cell organization and biogenesis	P	Selenium-binding protein 2 (Protein EMBRYO SAC DEVELOPMENT ARREST 38)
ruditapes_c13249	metabolic process	other metabolic processes	P	"Beta-glucosidase-like SFR2, chloroplastic (Protein SENSITIVE TO FREEZING 2) (AtSFR2)"
ruditapes_c13249	response to cold	stress response	P	"Beta-glucosidase-like SFR2, chloroplastic (Protein SENSITIVE TO FREEZING 2) (AtSFR2)"
ruditapes_c13249	response to freezing	stress response	P	"Beta-glucosidase-like SFR2, chloroplastic (Protein SENSITIVE TO FREEZING 2) (AtSFR2)"
ruditapes_c13249	carbohydrate metabolic process	other metabolic processes	P	"Beta-glucosidase-like SFR2, chloroplastic (Protein SENSITIVE TO FREEZING 2) (AtSFR2)"
ruditapes_c26862	transport	transport	P	Sugar transporter ERD6-like 4
ruditapes_c26862	transmembrane transport	transport	P	Sugar transporter ERD6-like 4
ruditapes_c26862	carbohydrate transport	transport	P	Sugar transporter ERD6-like 4
ruditapes_c30699	metabolic process	other metabolic processes	P	"Endoglucanase 24 (EC 3.2.1.4) (Endo-1,4-beta glucanase 24)"
ruditapes_c30699	carbohydrate metabolic process	other metabolic processes	P	"Endoglucanase 24 (EC 3.2.1.4) (Endo-1,4-beta glucanase 24)"
ruditapes_c30699	polysaccharide catabolic process	other metabolic processes	P	"Endoglucanase 24 (EC 3.2.1.4) (Endo-1,4-beta glucanase 24)"
ruditapes_c30699	cellulose catabolic process	other metabolic processes	P	"Endoglucanase 24 (EC 3.2.1.4) (Endo-1,4-beta glucanase 24)"
ruditapes_c30699	cell wall organization	cell organization and biogenesis	P	"Endoglucanase 24 (EC 3.2.1.4) (Endo-1,4-beta glucanase 24)"
ruditapes_lrc24939	transport	transport	P	ABC transporter G family member 22 (ABC transporter ABCG.22) (AtABCG22) (White-brown complex homolog protein 23) (AtWBC23)
ruditapes_lrc24939	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 22 (ABC transporter ABCG.22) (AtABCG22) (White-brown complex homolog protein 23) (AtWBC23)
ruditapes_lrc24939	response to water deprivation	stress response	P	ABC transporter G family member 22 (ABC transporter ABCG.22) (AtABCG22) (White-brown complex homolog protein 23) (AtWBC23)
ruditapes_lrc24939	transpiration	transport	P	ABC transporter G family member 22 (ABC transporter ABCG.22) (AtABCG22) (White-brown complex homolog protein 23) (AtWBC23)
ruditapes_c12167	transport	transport	P	Glutamate receptor 3.2 (AtGluR2) (Ligand-gated ion channel 3.2)
ruditapes_c12167	calcium ion transport	transport	P	Glutamate receptor 3.2 (AtGluR2) (Ligand-gated ion channel 3.2)
ruditapes_c12167	ionotropic glutamate receptor signaling pathway	signal transduction	P	Glutamate receptor 3.2 (AtGluR2) (Ligand-gated ion channel 3.2)
ruditapes_c12167	transmembrane calcium ion transport	transport	P	Glutamate receptor 3.2 (AtGluR2) (Ligand-gated ion channel 3.2)
ruditapes_c12167	calcium-mediated signaling	signal transduction	P	Glutamate receptor 3.2 (AtGluR2) (Ligand-gated ion channel 3.2)
ruditapes_c12167	ion transport	transport	P	Glutamate receptor 3.2 (AtGluR2) (Ligand-gated ion channel 3.2)
ruditapes_c15044	response to aluminum ion	other biological processes	P	Aluminum-activated malate transporter 5 (AtALMT5)
ruditapes_c15044	transport	transport	P	Aluminum-activated malate transporter 5 (AtALMT5)
ruditapes_c15044	ion transport	transport	P	Aluminum-activated malate transporter 5 (AtALMT5)
ruditapes_s35299	metabolic process	other metabolic processes	P	Tryptophan aminotransferase-related protein 4 (EC 2.6.1.-)
ruditapes_c23715	phosphorus metabolic process	other metabolic processes	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	ion transport	transport	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	transport	transport	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	phosphate ion homeostasis	other biological processes	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	sodium ion transport	transport	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	response to calcium ion	other biological processes	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	cellular manganese ion homeostasis	other biological processes	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	cellular calcium ion homeostasis	other biological processes	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	transmembrane transport	transport	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	cellular zinc ion homeostasis	other biological processes	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	lithium ion transport	transport	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	response to nematode	other biological processes	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	cation transport	transport	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes_c23715	calcium ion transport	transport	P	Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) antiporter CAX3) (Ca(2+)/H(+) exchanger 3) (Protein CATION EXCHANGER 3)
ruditapes2_lrc5293	transport	transport	P	Phosphate transporter PHO1 homolog 1 (Protein PHO1 homolog 1) (AtPHO1;H1)
ruditapes2_lrc5293	cellular response to phosphate starvation	stress response	P	Phosphate transporter PHO1 homolog 1 (Protein PHO1 homolog 1) (AtPHO1;H1)
ruditapes2_lrc5293	phosphate transport	transport	P	Phosphate transporter PHO1 homolog 1 (Protein PHO1 homolog 1) (AtPHO1;H1)
ruditapes_c23042	abscisic acid mediated signaling	signal transduction	P	EID1-like F-box protein 3
ruditapes_c23042	regulation of seed germination	developmental processes	P	EID1-like F-box protein 3
ruditapes_c23042	response to osmotic stress	stress response	P	EID1-like F-box protein 3
ruditapes_c23042	vegetative to reproductive phase transition	developmental processes	P	EID1-like F-box protein 3
ruditapes_c23042	response to salt stress	stress response	P	EID1-like F-box protein 3
ruditapes_c23042	response to water deprivation	stress response	P	EID1-like F-box protein 3
ruditapes_c23042	response to abscisic acid stimulus	other biological processes	P	EID1-like F-box protein 3
ruditapes_c4324	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative RNA polymerase II transcriptional coactivator
ruditapes_c4324	"transcription, DNA-dependent"	RNA metabolism	P	Putative RNA polymerase II transcriptional coactivator
ruditapes2_lrc3657	regulation of oviposition	other biological processes	P	Caveolin-1
ruditapes2_lrc3657	locomotion	other biological processes	P	Caveolin-1
ruditapes2_lrc3657	meiosis	cell cycle and proliferation	P	Caveolin-1
ruditapes2_lrc3657	Ras protein signal transduction	signal transduction	P	Caveolin-1
ruditapes_c30751	protein amino acid phosphorylation	protein metabolism	P	Protein kinase and PP2C-like domain-containing protein [Includes: Probable serine/threonine protein kinase At2g40860 (EC 2.7.11.1); Probable protein phosphatase 2C 31 (AtPP2C31) (EC 3.1.3.16)]
ruditapes_c30751	phosphorylation	other metabolic processes	P	Protein kinase and PP2C-like domain-containing protein [Includes: Probable serine/threonine protein kinase At2g40860 (EC 2.7.11.1); Probable protein phosphatase 2C 31 (AtPP2C31) (EC 3.1.3.16)]
ruditapes_c30751	metabolic process	other metabolic processes	P	Protein kinase and PP2C-like domain-containing protein [Includes: Probable serine/threonine protein kinase At2g40860 (EC 2.7.11.1); Probable protein phosphatase 2C 31 (AtPP2C31) (EC 3.1.3.16)]
ruditapes2_c49	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cell death specification protein 2
ruditapes2_c49	"transcription, DNA-dependent"	RNA metabolism	P	Cell death specification protein 2
ruditapes_lrc39627	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cell death specification protein 2
ruditapes_lrc39627	"transcription, DNA-dependent"	RNA metabolism	P	Cell death specification protein 2
ruditapes2_c49	negative regulation of anti-apoptosis	death	P	Cell death specification protein 2
ruditapes2_c49	apoptosis	death	P	Cell death specification protein 2
ruditapes_lrc39627	positive regulation of programmed cell death	death	P	Cell death specification protein 2
ruditapes_lrc39627	apoptosis	death	P	Cell death specification protein 2
ruditapes2_c49	positive regulation of programmed cell death	death	P	Cell death specification protein 2
ruditapes_lrc39627	negative regulation of anti-apoptosis	death	P	Cell death specification protein 2
ruditapes2_c2989	reproduction	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c2989	transport	transport	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c2989	hermaphrodite genitalia development	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c270	hermaphrodite genitalia development	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c270	growth	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c2989	oxidation reduction	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c270	electron transport chain	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c270	oxidation reduction	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c2989	body morphogenesis	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c2989	embryonic development ending in birth or egg hatching	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c2989	positive regulation of multicellular organism growth	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c270	nematode larval development	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c270	body morphogenesis	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c2989	electron transport chain	other metabolic processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c2989	nematode larval development	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c270	positive regulation of multicellular organism growth	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c270	transport	transport	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c270	reproduction	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c270	embryonic development ending in birth or egg hatching	developmental processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes2_c2989	growth	other biological processes	P	"Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit)"
ruditapes_s38677	translation	protein metabolism	P	60S ribosomal protein L32 (Ribosomal protein 49)
ruditapes_c7460	tRNA thio-modification	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (ATP-binding domain-containing protein 3) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_c7460	tRNA wobble uridine modification	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (ATP-binding domain-containing protein 3) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_c7460	tRNA processing	RNA metabolism	P	Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (ATP-binding domain-containing protein 3) (Cytoplasmic tRNA adenylyltransferase 1)
ruditapes_lrc33280	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc32214	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc9424	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes2_lrc6606	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc34042	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_c5311	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc35987	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc18069	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc39197	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc37074	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes2_lrc3626	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc33506	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc37830	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc34119	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc32144	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_s39318	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc34947	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes2_lrc3516	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc34123	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes_lrc33305	positive regulation of cell cycle	cell cycle and proliferation	P	"Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)"
ruditapes2_c947	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes2_c947	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes2_c947	transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc38580	proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc34584	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc34584	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc34584	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35145	ion transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35145	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35145	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35751	transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35751	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35751	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc38580	transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35751	proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc34584	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes2_c947	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes2_c947	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35145	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35145	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc32511	transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc32511	proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35018	proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35018	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35018	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc32511	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc32511	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes2_c947	ion transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc38580	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc38580	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc34584	transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35145	proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35018	ion transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35018	transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35751	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35751	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc32511	"phagocytosis, engulfment"	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc32511	"phagocytosis, engulfment"	cell organization and biogenesis	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35018	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35018	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes2_c947	proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc38580	ion transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc32511	ion transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35751	ion transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc34584	proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc34584	ion transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc38580	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc38580	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc35145	transport	transport	P	"ATP synthase subunit b, mitochondrial (ATPase subunit b) (FO-ATP synthase subunit b)"
ruditapes_lrc34699	oogenesis	other biological processes	P	Nascent polypeptide-associated complex subunit alpha (NAC-alpha) (Alpha-NAC)
ruditapes_lrc34699	transport	transport	P	Nascent polypeptide-associated complex subunit alpha (NAC-alpha) (Alpha-NAC)
ruditapes_lrc34699	multicellular organismal development	developmental processes	P	Nascent polypeptide-associated complex subunit alpha (NAC-alpha) (Alpha-NAC)
ruditapes_lrc34699	protein transport	transport	P	Nascent polypeptide-associated complex subunit alpha (NAC-alpha) (Alpha-NAC)
ruditapes_lrc30084	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc30935	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4664	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4664	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc30084	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc30935	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4096	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc32779	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc36310	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc30084	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc30084	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4953	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4158	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc15456	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4626	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4626	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc15456	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4664	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4953	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc32779	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4158	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc35032	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4096	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc35032	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc36310	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4664	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc30935	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc30935	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc36310	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc15456	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4096	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4953	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc32779	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4626	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc32779	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4158	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4158	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4096	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc35032	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc36310	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc35032	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4953	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes2_lrc4626	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_lrc15456	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (NADH-ubiquinone oxidoreductase acyl-carrier subunit)"
ruditapes_c15862	pigmentation during development	other biological processes	P	Dopamine N-acetyltransferase (EC 2.3.1.87) (Arylalkylamine N-acetyltransferase) (aaNAT1)
ruditapes_c15862	sleep	other biological processes	P	Dopamine N-acetyltransferase (EC 2.3.1.87) (Arylalkylamine N-acetyltransferase) (aaNAT1)
ruditapes_c15862	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Dopamine N-acetyltransferase (EC 2.3.1.87) (Arylalkylamine N-acetyltransferase) (aaNAT1)
ruditapes_c15862	serotonin catabolic process	other metabolic processes	P	Dopamine N-acetyltransferase (EC 2.3.1.87) (Arylalkylamine N-acetyltransferase) (aaNAT1)
ruditapes_c15862	dopamine catabolic process	other metabolic processes	P	Dopamine N-acetyltransferase (EC 2.3.1.87) (Arylalkylamine N-acetyltransferase) (aaNAT1)
ruditapes_c15862	catecholamine metabolic process	other metabolic processes	P	Dopamine N-acetyltransferase (EC 2.3.1.87) (Arylalkylamine N-acetyltransferase) (aaNAT1)
ruditapes_c15862	octopamine catabolic process	other metabolic processes	P	Dopamine N-acetyltransferase (EC 2.3.1.87) (Arylalkylamine N-acetyltransferase) (aaNAT1)
ruditapes_c15862	octopamine catabolic process	cell-cell signaling	P	Dopamine N-acetyltransferase (EC 2.3.1.87) (Arylalkylamine N-acetyltransferase) (aaNAT1)
ruditapes_c3039	potassium ion transport	transport	P	Open rectifier potassium channel protein 1 (Two pore domain potassium channel Ork1)
ruditapes_c3039	transport	transport	P	Open rectifier potassium channel protein 1 (Two pore domain potassium channel Ork1)
ruditapes_c3039	locomotor rhythm	other biological processes	P	Open rectifier potassium channel protein 1 (Two pore domain potassium channel Ork1)
ruditapes_c3039	ion transport	transport	P	Open rectifier potassium channel protein 1 (Two pore domain potassium channel Ork1)
ruditapes_c3039	regulation of heart rate	other biological processes	P	Open rectifier potassium channel protein 1 (Two pore domain potassium channel Ork1)
ruditapes_s38129	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37672	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35330	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38202	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_lrc35235	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37555	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35106	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38906	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38906	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_lrc35235	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38229	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38825	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38229	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37555	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc7157	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35106	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc5262	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37555	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_lrc35235	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38825	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37672	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38825	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35106	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38202	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35330	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38129	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc7157	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_lrc35235	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38229	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38906	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38229	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc7157	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_lrc35235	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35330	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38202	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35330	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35330	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc7157	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35106	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37555	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37555	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc5262	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38202	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc7157	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_lrc35235	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38129	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38906	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38906	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37555	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38229	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35106	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38129	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37672	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38129	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc5262	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38202	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38202	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35330	defense response	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38129	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37672	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s35106	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37672	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38825	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc7157	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38229	response to wounding	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38906	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38825	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s38825	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc5262	cellular response to water deprivation	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc5262	negative regulation of peptidase activity	other biological processes	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_s37672	cellular response to cold	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes2_lrc5262	cellular response to heat	stress response	P	Cysteine proteinase inhibitor 1 (AtCYS-1)
ruditapes_lrc26113	translation	protein metabolism	P	40S ribosomal protein S15
ruditapes_s36301	translation	protein metabolism	P	40S ribosomal protein S19
ruditapes_lrc38469	translation	protein metabolism	P	40S ribosomal protein S19
ruditapes_lrc34645	translation	protein metabolism	P	40S ribosomal protein S19
ruditapes_lrc35347	translation	protein metabolism	P	40S ribosomal protein S19
ruditapes_lrc34279	translation	protein metabolism	P	40S ribosomal protein S19
ruditapes2_c4291	translation	protein metabolism	P	40S ribosomal protein S19
ruditapes2_lrc4479	translation	protein metabolism	P	40S ribosomal protein S19
ruditapes2_lrc6039	translation	protein metabolism	P	40S ribosomal protein S19
ruditapes_lrc35500	translation	protein metabolism	P	40S ribosomal protein S19
ruditapes2_c1272	shoot morphogenesis	developmental processes	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	root development	developmental processes	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	chromatin silencing	RNA metabolism	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	"photoperiodism, flowering"	developmental processes	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	"negative regulation of gene expression, epigenetic"	other metabolic processes	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	flower development	developmental processes	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	vernalization response	stress response	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	negative regulation of flower development	developmental processes	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	multicellular organismal development	developmental processes	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	"transcription, DNA-dependent"	RNA metabolism	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	chromatin modification	cell organization and biogenesis	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	cell differentiation	other biological processes	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	photoperiodism	other biological processes	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	multidimensional cell growth	other biological processes	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	"negative regulation of molecular function, epigenetic"	other biological processes	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes2_c1272	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromo domain-containing protein LHP1 (Protein LIKE HETEROCHROMATIN PROTEIN 1) (Protein TERMINAL FLOWER 2)
ruditapes_c17230	translation	protein metabolism	P	60S ribosomal protein L11 (Fragment)
ruditapes_c16490	oxygen transport	transport	P	Non-symbiotic hemoglobin 1 (GOShi GLB1) (Hb1)
ruditapes_c17199	response to abscisic acid stimulus	other biological processes	P	Calmodulin-like protein 5 (Calmodulin-2) (OsCAM-2)
ruditapes_c17199	response to salt stress	stress response	P	Calmodulin-like protein 5 (Calmodulin-2) (OsCAM-2)
ruditapes_c17199	calcium-mediated signaling	signal transduction	P	Calmodulin-like protein 5 (Calmodulin-2) (OsCAM-2)
ruditapes_c17199	response to water deprivation	stress response	P	Calmodulin-like protein 5 (Calmodulin-2) (OsCAM-2)
ruditapes_c18355	epidermal growth factor receptor signaling pathway	signal transduction	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	brain development	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	imaginal disc-derived wing morphogenesis	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	imaginal disc-derived wing vein morphogenesis	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	anti-apoptosis	death	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	positive regulation of cell proliferation	cell cycle and proliferation	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	muscle attachment	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	peripheral nervous system development	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	midgut development	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	leg disc proximal/distal pattern formation	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	cell projection assembly	cell organization and biogenesis	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	cell-cell signaling	cell-cell signaling	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	multicellular organismal development	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	haltere development	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	notum cell fate specification	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	notum development	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	positive regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	border follicle cell migration	other biological processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes_c18355	imaginal disc-derived wing vein specification	developmental processes	P	Protein vein (Epidermal growth factor-like protein) (Protein defective dorsal discs)
ruditapes2_c2511	metabolic process	other metabolic processes	P	Polygalacturonase At1g48100 (PG) (EC 3.2.1.15) (Pectinase At1g48100)
ruditapes2_c2511	cell wall organization	cell organization and biogenesis	P	Polygalacturonase At1g48100 (PG) (EC 3.2.1.15) (Pectinase At1g48100)
ruditapes2_c2511	carbohydrate metabolic process	other metabolic processes	P	Polygalacturonase At1g48100 (PG) (EC 3.2.1.15) (Pectinase At1g48100)
ruditapes_c23700	carbohydrate metabolic process	other metabolic processes	P	Probable galactinol--sucrose galactosyltransferase 2 (EC 2.4.1.82) (Protein SEED IMBIBITION 2) (Raffinose synthase 2)
ruditapes_c23700	response to oxidative stress	stress response	P	Probable galactinol--sucrose galactosyltransferase 2 (EC 2.4.1.82) (Protein SEED IMBIBITION 2) (Raffinose synthase 2)
ruditapes_c23700	raffinose catabolic process	other metabolic processes	P	Probable galactinol--sucrose galactosyltransferase 2 (EC 2.4.1.82) (Protein SEED IMBIBITION 2) (Raffinose synthase 2)
ruditapes2_c2553	intracellular protein transport	transport	P	Coatomer subunit alpha-1 (Alpha-coat protein 1) (Alpha-COP 1)
ruditapes2_c2553	protein transport	transport	P	Coatomer subunit alpha-1 (Alpha-coat protein 1) (Alpha-COP 1)
ruditapes2_c2553	transport	transport	P	Coatomer subunit alpha-1 (Alpha-coat protein 1) (Alpha-COP 1)
ruditapes2_c2553	vesicle-mediated transport	transport	P	Coatomer subunit alpha-1 (Alpha-coat protein 1) (Alpha-COP 1)
ruditapes_c29129	carbohydrate metabolic process	other metabolic processes	P	"Alpha-amylase 3, chloroplastic (AtAMY3) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c29129	starch catabolic process	other metabolic processes	P	"Alpha-amylase 3, chloroplastic (AtAMY3) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)"
ruditapes_c26297	xylogalacturonan metabolic process	other metabolic processes	P	"Xylogalacturonan beta-1,3-xylosyltransferase (EC 2.4.2.41) (Protein XYLOGALACTURONAN DEFICIENT 1)"
ruditapes_c26297	xylogalacturonan metabolic process	cell organization and biogenesis	P	"Xylogalacturonan beta-1,3-xylosyltransferase (EC 2.4.2.41) (Protein XYLOGALACTURONAN DEFICIENT 1)"
ruditapes_c26297	cell wall organization	cell organization and biogenesis	P	"Xylogalacturonan beta-1,3-xylosyltransferase (EC 2.4.2.41) (Protein XYLOGALACTURONAN DEFICIENT 1)"
ruditapes_c26297	pectin biosynthetic process	other metabolic processes	P	"Xylogalacturonan beta-1,3-xylosyltransferase (EC 2.4.2.41) (Protein XYLOGALACTURONAN DEFICIENT 1)"
ruditapes_lrc35321	secondary cell wall biogenesis	other biological processes	P	Protein WALLS ARE THIN 1
ruditapes_lrc35321	unidimensional cell growth	other biological processes	P	Protein WALLS ARE THIN 1
ruditapes_c9089	biological_process	other biological processes	P	Polyadenylate-binding protein-interacting protein 2 (PABP-interacting protein 2) (Poly(A)-binding protein-interacting protein 2) (CTC-interacting domain protein 2) (PAM2-containing protein CID2)
ruditapes_c10949	transmembrane transport	transport	P	Sugar transport protein 13 (Hexose transporter 13) (Multicopy suppressor of snf4 deficiency protein 1)
ruditapes_c10949	carbohydrate transport	transport	P	Sugar transport protein 13 (Hexose transporter 13) (Multicopy suppressor of snf4 deficiency protein 1)
ruditapes_c10949	transport	transport	P	Sugar transport protein 13 (Hexose transporter 13) (Multicopy suppressor of snf4 deficiency protein 1)
ruditapes_c10523	biological_process	other biological processes	P	Probable calcium-binding protein CML13 (Calmodulin-like protein 13)
ruditapes2_c1639	biological_process	other biological processes	P	Probable calcium-binding protein CML13 (Calmodulin-like protein 13)
ruditapes_c16411	DNA methylation	DNA metabolism	P	DNA (cytosine-5)-methyltransferase CMT2 (EC 2.1.1.37) (Chromomethylase 2) (Protein CHROMOMETHYLASE 2)
ruditapes_c16411	methylation	other metabolic processes	P	DNA (cytosine-5)-methyltransferase CMT2 (EC 2.1.1.37) (Chromomethylase 2) (Protein CHROMOMETHYLASE 2)
ruditapes_c16411	"transcription, DNA-dependent"	RNA metabolism	P	DNA (cytosine-5)-methyltransferase CMT2 (EC 2.1.1.37) (Chromomethylase 2) (Protein CHROMOMETHYLASE 2)
ruditapes_c16411	"regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA (cytosine-5)-methyltransferase CMT2 (EC 2.1.1.37) (Chromomethylase 2) (Protein CHROMOMETHYLASE 2)
ruditapes_c16411	chromatin modification	cell organization and biogenesis	P	DNA (cytosine-5)-methyltransferase CMT2 (EC 2.1.1.37) (Chromomethylase 2) (Protein CHROMOMETHYLASE 2)
ruditapes_c22474	ATP catabolic process	other metabolic processes	P	ABC transporter D family member 1 (ABC transporter ABCD.1) (AtABCD1) (EC 3.6.3.47) (Peroxisomal ABC transporter 1) (AtPXA1) (Protein ACETATE NON-UTILIZING 2) (Protein COMATOSE) (Protein PEROXISOME DEFECTIVE 3) (Ped3p)
ruditapes_c22474	transport	transport	P	ABC transporter D family member 1 (ABC transporter ABCD.1) (AtABCD1) (EC 3.6.3.47) (Peroxisomal ABC transporter 1) (AtPXA1) (Protein ACETATE NON-UTILIZING 2) (Protein COMATOSE) (Protein PEROXISOME DEFECTIVE 3) (Ped3p)
ruditapes_c22474	transmembrane transport	transport	P	ABC transporter D family member 1 (ABC transporter ABCD.1) (AtABCD1) (EC 3.6.3.47) (Peroxisomal ABC transporter 1) (AtPXA1) (Protein ACETATE NON-UTILIZING 2) (Protein COMATOSE) (Protein PEROXISOME DEFECTIVE 3) (Ped3p)
ruditapes_c22474	positive regulation of seed germination	developmental processes	P	ABC transporter D family member 1 (ABC transporter ABCD.1) (AtABCD1) (EC 3.6.3.47) (Peroxisomal ABC transporter 1) (AtPXA1) (Protein ACETATE NON-UTILIZING 2) (Protein COMATOSE) (Protein PEROXISOME DEFECTIVE 3) (Ped3p)
ruditapes_c22474	fatty acyl coenzyme A transport	transport	P	ABC transporter D family member 1 (ABC transporter ABCD.1) (AtABCD1) (EC 3.6.3.47) (Peroxisomal ABC transporter 1) (AtPXA1) (Protein ACETATE NON-UTILIZING 2) (Protein COMATOSE) (Protein PEROXISOME DEFECTIVE 3) (Ped3p)
ruditapes_c22474	peroxisomal long-chain fatty acid import	transport	P	ABC transporter D family member 1 (ABC transporter ABCD.1) (AtABCD1) (EC 3.6.3.47) (Peroxisomal ABC transporter 1) (AtPXA1) (Protein ACETATE NON-UTILIZING 2) (Protein COMATOSE) (Protein PEROXISOME DEFECTIVE 3) (Ped3p)
ruditapes_lrc38355	purine transport	transport	P	Purine permease 2 (AtPUP2)
ruditapes_c25684	oxidation reduction	other metabolic processes	P	Cytochrome P450 18a1 (EC 1.14.-.-) (CYPXVIIIA1)
ruditapes_c25684	pupation	developmental processes	P	Cytochrome P450 18a1 (EC 1.14.-.-) (CYPXVIIIA1)
ruditapes_c25684	prepupal development	developmental processes	P	Cytochrome P450 18a1 (EC 1.14.-.-) (CYPXVIIIA1)
ruditapes_c25684	multicellular organismal development	developmental processes	P	Cytochrome P450 18a1 (EC 1.14.-.-) (CYPXVIIIA1)
ruditapes_c25684	imaginal disc-derived leg morphogenesis	developmental processes	P	Cytochrome P450 18a1 (EC 1.14.-.-) (CYPXVIIIA1)
ruditapes_c25684	metamorphosis	other biological processes	P	Cytochrome P450 18a1 (EC 1.14.-.-) (CYPXVIIIA1)
ruditapes_c25684	ecdysteroid catabolic process	other metabolic processes	P	Cytochrome P450 18a1 (EC 1.14.-.-) (CYPXVIIIA1)
ruditapes_c25684	ecdysteroid catabolic process	developmental processes	P	Cytochrome P450 18a1 (EC 1.14.-.-) (CYPXVIIIA1)
ruditapes_c7597	cell adhesion	cell adhesion	P	Thrombospondin-2 (Corticotropin-induced secreted protein) (CISP)
ruditapes_c25050	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor-like protein OLF4
ruditapes_c25050	response to stimulus	other biological processes	P	Olfactory receptor-like protein OLF4
ruditapes_c25050	signal transduction	signal transduction	P	Olfactory receptor-like protein OLF4
ruditapes_c25050	sensory perception of smell	other biological processes	P	Olfactory receptor-like protein OLF4
ruditapes_c25050	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor-like protein OLF4
ruditapes_c28197	metabolic process	other metabolic processes	P	Helicase-like transcription factor (EC 3.6.4.-) (EC 6.3.2.-) (RUSH-1) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3)
ruditapes_c28197	ATP catabolic process	other metabolic processes	P	Helicase-like transcription factor (EC 3.6.4.-) (EC 6.3.2.-) (RUSH-1) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3)
ruditapes_c28197	chromatin modification	cell organization and biogenesis	P	Helicase-like transcription factor (EC 3.6.4.-) (EC 6.3.2.-) (RUSH-1) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3)
ruditapes_c28197	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Helicase-like transcription factor (EC 3.6.4.-) (EC 6.3.2.-) (RUSH-1) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3)
ruditapes_c28197	"transcription, DNA-dependent"	RNA metabolism	P	Helicase-like transcription factor (EC 3.6.4.-) (EC 6.3.2.-) (RUSH-1) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3)
ruditapes_c7901	transport	transport	P	Deleted in malignant brain tumors 1 protein (Hensin)
ruditapes2_c1322	cell differentiation	other biological processes	P	Deleted in malignant brain tumors 1 protein (Hensin)
ruditapes2_c1322	multicellular organismal development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Hensin)
ruditapes_c7901	multicellular organismal development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Hensin)
ruditapes2_c1322	transport	transport	P	Deleted in malignant brain tumors 1 protein (Hensin)
ruditapes2_c1322	protein transport	transport	P	Deleted in malignant brain tumors 1 protein (Hensin)
ruditapes_c7901	protein transport	transport	P	Deleted in malignant brain tumors 1 protein (Hensin)
ruditapes_c7901	cell differentiation	other biological processes	P	Deleted in malignant brain tumors 1 protein (Hensin)
ruditapes_s39711	cell adhesion	cell adhesion	P	Platelet endothelial cell adhesion molecule (PECAM-1) (CD antigen CD31)
ruditapes_c11222	steroid biosynthetic process	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes_c11222	oxidation reduction	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes2_c1838	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes2_c1838	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes2_c3889	ribosome biogenesis	other biological processes	P	Nucleolar protein 56 (Nucleolar protein 5A)
ruditapes_c24556	metal ion transport	transport	P	Zinc transporter ZIP12 (Solute carrier family 39 member 12) (Zrt- and Irt-like protein 12) (ZIP-12)
ruditapes_c24556	transmembrane transport	transport	P	Zinc transporter ZIP12 (Solute carrier family 39 member 12) (Zrt- and Irt-like protein 12) (ZIP-12)
ruditapes_c24556	ion transport	transport	P	Zinc transporter ZIP12 (Solute carrier family 39 member 12) (Zrt- and Irt-like protein 12) (ZIP-12)
ruditapes_c24556	transport	transport	P	Zinc transporter ZIP12 (Solute carrier family 39 member 12) (Zrt- and Irt-like protein 12) (ZIP-12)
ruditapes_c24556	zinc ion transport	transport	P	Zinc transporter ZIP12 (Solute carrier family 39 member 12) (Zrt- and Irt-like protein 12) (ZIP-12)
ruditapes_c3486	erythrocyte maturation	developmental processes	P	Metalloproteinase inhibitor 1 (Tissue inhibitor of metalloproteinases 1) (TIMP-1)
ruditapes_c3486	negative regulation of catalytic activity	other biological processes	P	Metalloproteinase inhibitor 1 (Tissue inhibitor of metalloproteinases 1) (TIMP-1)
ruditapes_c3486	negative regulation of membrane protein ectodomain proteolysis	protein metabolism	P	Metalloproteinase inhibitor 1 (Tissue inhibitor of metalloproteinases 1) (TIMP-1)
ruditapes_c27371	calcium-independent cell-cell adhesion	cell adhesion	P	Claudin-2
ruditapes_lrc23849	apoptotic nuclear changes	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc23849	apoptotic nuclear changes	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_s37102	apoptosis	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_s37102	negative regulation of cell growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc23849	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc23849	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_s37102	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_s37102	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc23849	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc23849	apoptosis	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc23849	negative regulation of cell growth	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_s37102	apoptotic nuclear changes	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_s37102	apoptotic nuclear changes	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_lrc23849	induction of apoptosis by extracellular signals	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_s37102	induction of apoptosis by extracellular signals	death	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_s37102	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic-interferon-induced mortality 19 protein) (GRIM-19) (NADH-ubiquinone oxidoreductase B16.6 subunit)
ruditapes_c1786	oxidation reduction	other metabolic processes	P	Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC 1.14.13.8) (Dimethylaniline oxidase 3) (Hepatic flavin-containing monooxygenase 3) (FMO 3) (Trimethylamine monooxygenase) (EC 1.14.13.148)
ruditapes_s37759	cell adhesion	cell adhesion	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes_c22546	cell adhesion	cell adhesion	P	E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
ruditapes_c22789	response to X-ray	other biological processes	P	X-ray radiation resistance-associated protein 1 (Fragment)
ruditapes_c12424	spermatogenesis	other biological processes	P	Protein disulfide-isomerase-like protein of the testis
ruditapes_c12424	cell differentiation	other biological processes	P	Protein disulfide-isomerase-like protein of the testis
ruditapes_c12424	cell redox homeostasis	other biological processes	P	Protein disulfide-isomerase-like protein of the testis
ruditapes_c12424	multicellular organismal development	developmental processes	P	Protein disulfide-isomerase-like protein of the testis
ruditapes_c31443	chitin metabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c2882	apoptosis	death	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c31443	inflammatory response	stress response	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c2882	metabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c31443	metabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c31443	apoptosis	death	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c31443	production of molecular mediator of acute inflammatory response	stress response	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c2882	chitin catabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c2882	carbohydrate metabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c2882	polysaccharide catabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c2882	chitin metabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c2882	inflammatory response	stress response	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c31443	chitin catabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c2882	production of molecular mediator of acute inflammatory response	stress response	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c31443	carbohydrate metabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c31443	polysaccharide catabolic process	other metabolic processes	P	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)
ruditapes_c10571	apoptosis	death	P	Baculoviral IAP repeat-containing protein 8 (Inhibitor of apoptosis-like protein 2) (IAP-like protein 2) (ILP-2)
ruditapes2_lrc5753	nematode larval development	developmental processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes2_lrc5753	locomotion	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s38744	locomotion	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s38744	nematode larval development	developmental processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s38744	body morphogenesis	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s35944	embryonic development ending in birth or egg hatching	developmental processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s35944	reproduction	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s35944	growth	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes2_lrc5753	growth	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes2_lrc5753	positive regulation of growth rate	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes2_lrc5753	embryonic development ending in birth or egg hatching	developmental processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s38744	embryonic development ending in birth or egg hatching	developmental processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s38744	reproduction	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s38744	growth	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s35944	locomotion	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes2_lrc5753	body morphogenesis	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s35944	body morphogenesis	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s35944	nematode larval development	developmental processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes2_lrc5753	reproduction	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s38744	positive regulation of growth rate	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_s35944	positive regulation of growth rate	other biological processes	P	PCI domain-containing protein 2 homolog (CSN12-like protein)
ruditapes_lrc16387	embryonic development ending in birth or egg hatching	developmental processes	P	Putative zinc finger protein C02F5.12
ruditapes_lrc16387	reproduction	other biological processes	P	Putative zinc finger protein C02F5.12
ruditapes2_c1924	mitochondrial proton-transporting ATP synthase complex assembly	cell organization and biogenesis	P	"Transmembrane protein 70 homolog, mitochondrial"
ruditapes_c31033	"transposition, DNA-mediated"	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon BS (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c31033	RNA-dependent DNA replication	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon BS (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c15063	"transposition, DNA-mediated"	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon BS (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c15063	RNA-dependent DNA replication	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon BS (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c20692	"transposition, DNA-mediated"	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon BS (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c9179	"transposition, DNA-mediated"	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon BS (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c20692	RNA-dependent DNA replication	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon BS (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c13870	"transposition, DNA-mediated"	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon BS (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c13870	RNA-dependent DNA replication	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon BS (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c9179	RNA-dependent DNA replication	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon BS (EC 2.7.7.49) (Reverse transcriptase)
ruditapes2_c92	translation	protein metabolism	P	40S ribosomal protein S16
ruditapes_lrc25441	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_c19621	oxidation reduction	other metabolic processes	P	D-amino-acid oxidase 2 (DAAO 2) (DAMOX 2) (DAO 2) (EC 1.4.3.3)
ruditapes_lrc11940	mitotic sister chromatid segregation	cell cycle and proliferation	P	Nipped-B-like protein pqn-85 (Prion-like-(Q/N-rich) domain-bearing protein 85) (SCC2 homolog)
ruditapes_lrc11940	mitotic sister chromatid segregation	cell organization and biogenesis	P	Nipped-B-like protein pqn-85 (Prion-like-(Q/N-rich) domain-bearing protein 85) (SCC2 homolog)
ruditapes_lrc11940	embryonic development ending in birth or egg hatching	developmental processes	P	Nipped-B-like protein pqn-85 (Prion-like-(Q/N-rich) domain-bearing protein 85) (SCC2 homolog)
ruditapes_lrc11940	locomotion	other biological processes	P	Nipped-B-like protein pqn-85 (Prion-like-(Q/N-rich) domain-bearing protein 85) (SCC2 homolog)
ruditapes_lrc11940	body morphogenesis	other biological processes	P	Nipped-B-like protein pqn-85 (Prion-like-(Q/N-rich) domain-bearing protein 85) (SCC2 homolog)
ruditapes_lrc11940	cell cycle	cell cycle and proliferation	P	Nipped-B-like protein pqn-85 (Prion-like-(Q/N-rich) domain-bearing protein 85) (SCC2 homolog)
ruditapes_lrc11940	maintenance of mitotic sister chromatid cohesion	cell cycle and proliferation	P	Nipped-B-like protein pqn-85 (Prion-like-(Q/N-rich) domain-bearing protein 85) (SCC2 homolog)
ruditapes_lrc11940	maintenance of mitotic sister chromatid cohesion	cell organization and biogenesis	P	Nipped-B-like protein pqn-85 (Prion-like-(Q/N-rich) domain-bearing protein 85) (SCC2 homolog)
ruditapes_c13233	microtubule cytoskeleton organization	cell organization and biogenesis	P	Spindle pole body component 98 (DdSpc98) (Spc98)
ruditapes_c13233	microtubule nucleation	cell organization and biogenesis	P	Spindle pole body component 98 (DdSpc98) (Spc98)
ruditapes2_c2316	"germline cell cycle switching, mitotic to meiotic cell cycle"	cell cycle and proliferation	P	5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK subunit alpha-2) (EC 2.7.11.1)
ruditapes2_c2316	phosphorylation	other metabolic processes	P	5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK subunit alpha-2) (EC 2.7.11.1)
ruditapes2_c2316	determination of adult life span	developmental processes	P	5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK subunit alpha-2) (EC 2.7.11.1)
ruditapes2_c2316	protein amino acid phosphorylation	protein metabolism	P	5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK subunit alpha-2) (EC 2.7.11.1)
ruditapes2_c2316	response to stress	stress response	P	5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK subunit alpha-2) (EC 2.7.11.1)
ruditapes_c13164	oxidation reduction	other metabolic processes	P	Putative fatty acyl-CoA reductase CG8306 (EC 1.2.1.n2)
ruditapes_c13164	lipid biosynthetic process	other metabolic processes	P	Putative fatty acyl-CoA reductase CG8306 (EC 1.2.1.n2)
ruditapes_c13164	wax biosynthetic process	other metabolic processes	P	Putative fatty acyl-CoA reductase CG8306 (EC 1.2.1.n2)
ruditapes_c13164	lipid metabolic process	other metabolic processes	P	Putative fatty acyl-CoA reductase CG8306 (EC 1.2.1.n2)
ruditapes_c12382	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_lrc36032	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_lrc36369	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_c12382	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_lrc36369	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_lrc36032	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_c12382	transport	transport	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_lrc36369	transport	transport	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_lrc36032	transport	transport	P	NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH dehydrogenase subunit 1)
ruditapes_c26988	microtubule-based process	other biological processes	P	Tubulin alpha-6 chain
ruditapes_c26988	GTP catabolic process	other metabolic processes	P	Tubulin alpha-6 chain
ruditapes_c26988	microtubule-based movement	other biological processes	P	Tubulin alpha-6 chain
ruditapes_c26988	protein polymerization	cell organization and biogenesis	P	Tubulin alpha-6 chain
ruditapes2_lrc5734	translation	protein metabolism	P	40S ribosomal protein S24
ruditapes2_c10	translation	protein metabolism	P	40S ribosomal protein S24
ruditapes2_lrc2615	translation	protein metabolism	P	40S ribosomal protein S24
ruditapes_lrc33519	translation	protein metabolism	P	40S ribosomal protein S24
ruditapes2_lrc5921	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes_s40076	translation	protein metabolism	P	40S ribosomal protein S17
ruditapes2_c250	translation	protein metabolism	P	60S ribosomal protein L39
ruditapes_lrc17737	translation	protein metabolism	P	60S ribosomal protein L39
ruditapes2_c5144	translation	protein metabolism	P	60S ribosomal protein L39
ruditapes_lrc12134	translation	protein metabolism	P	60S ribosomal protein L32
ruditapes_lrc34660	translation	protein metabolism	P	60S ribosomal protein L13a
ruditapes_lrc39210	translation	protein metabolism	P	60S ribosomal protein L13a
ruditapes_s37964	cell cycle	cell cycle and proliferation	P	Enhancer of rudimentary homolog
ruditapes_s37964	biological_process	other biological processes	P	Enhancer of rudimentary homolog
ruditapes_c14369	metabolic process	other metabolic processes	P	"Acyl-coenzyme A oxidase 4, peroxisomal (AOX 4) (EC 1.3.3.6) (G6p) (Short-chain acyl-CoA oxidase) (AtCX4) (AtG6) (SAOX)"
ruditapes_c14369	short-chain fatty acid metabolic process	other metabolic processes	P	"Acyl-coenzyme A oxidase 4, peroxisomal (AOX 4) (EC 1.3.3.6) (G6p) (Short-chain acyl-CoA oxidase) (AtCX4) (AtG6) (SAOX)"
ruditapes_c14369	lipid metabolic process	other metabolic processes	P	"Acyl-coenzyme A oxidase 4, peroxisomal (AOX 4) (EC 1.3.3.6) (G6p) (Short-chain acyl-CoA oxidase) (AtCX4) (AtG6) (SAOX)"
ruditapes_c14369	oxidation reduction	other metabolic processes	P	"Acyl-coenzyme A oxidase 4, peroxisomal (AOX 4) (EC 1.3.3.6) (G6p) (Short-chain acyl-CoA oxidase) (AtCX4) (AtG6) (SAOX)"
ruditapes_c14369	fatty acid beta-oxidation	other metabolic processes	P	"Acyl-coenzyme A oxidase 4, peroxisomal (AOX 4) (EC 1.3.3.6) (G6p) (Short-chain acyl-CoA oxidase) (AtCX4) (AtG6) (SAOX)"
ruditapes_c14369	fatty acid metabolic process	other metabolic processes	P	"Acyl-coenzyme A oxidase 4, peroxisomal (AOX 4) (EC 1.3.3.6) (G6p) (Short-chain acyl-CoA oxidase) (AtCX4) (AtG6) (SAOX)"
ruditapes_c14369	embryonic development ending in seed dormancy	developmental processes	P	"Acyl-coenzyme A oxidase 4, peroxisomal (AOX 4) (EC 1.3.3.6) (G6p) (Short-chain acyl-CoA oxidase) (AtCX4) (AtG6) (SAOX)"
ruditapes_c19848	metabolic process	other metabolic processes	P	S-linalool synthase (EC 4.2.3.25)
ruditapes_lrc34996	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes2_lrc3847	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_lrc35681	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_lrc20388	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_lrc32456	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_lrc12381	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_lrc33453	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes2_c4169	translation	protein metabolism	P	60S ribosomal protein L9
ruditapes_c29992	putrescine biosynthetic process	other metabolic processes	P	Arginine decarboxylase (ADC) (ARGDC) (EC 4.1.1.19)
ruditapes_c29992	arginine catabolic process	other metabolic processes	P	Arginine decarboxylase (ADC) (ARGDC) (EC 4.1.1.19)
ruditapes_c29992	spermidine biosynthetic process	other metabolic processes	P	Arginine decarboxylase (ADC) (ARGDC) (EC 4.1.1.19)
ruditapes2_c2984	translation	protein metabolism	P	60S ribosomal protein L44
ruditapes_s40010	iron ion transport	transport	P	"Ferritin-1, chloroplastic (EC 1.16.3.1)"
ruditapes_s40010	cellular iron ion homeostasis	other biological processes	P	"Ferritin-1, chloroplastic (EC 1.16.3.1)"
ruditapes_s40010	oxidation reduction	other metabolic processes	P	"Ferritin-1, chloroplastic (EC 1.16.3.1)"
ruditapes2_c915	negative regulation of catalytic activity	other biological processes	P	Pectinesterase 2.2 (PE 2.2) (EC 3.1.1.11) (Pectin methylesterase 2.2)
ruditapes2_c915	cell wall modification	cell organization and biogenesis	P	Pectinesterase 2.2 (PE 2.2) (EC 3.1.1.11) (Pectin methylesterase 2.2)
ruditapes2_c915	cell wall organization	cell organization and biogenesis	P	Pectinesterase 2.2 (PE 2.2) (EC 3.1.1.11) (Pectin methylesterase 2.2)
ruditapes2_c915	ripening	developmental processes	P	Pectinesterase 2.2 (PE 2.2) (EC 3.1.1.11) (Pectin methylesterase 2.2)
ruditapes_c17705	cytokinesis	other biological processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c17705	cell division	other biological processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c17705	locomotion	other biological processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c17705	morphogenesis of an epithelium	developmental processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c17705	reproduction	other biological processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c17705	vulval development	developmental processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c17705	determination of adult life span	developmental processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c17705	multicellular organismal development	developmental processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c17705	oviposition	other biological processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c17705	glycosaminoglycan biosynthetic process	other metabolic processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c17705	positive regulation of multicellular organism growth	other biological processes	P	Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide O-xylosyltransferase) (Squashed vulva protein 6)
ruditapes_c1274	lipid storage	other biological processes	P	Fatty acid-binding protein homolog 9
ruditapes_c1274	transport	transport	P	Fatty acid-binding protein homolog 9
ruditapes_lrc40079	lipid storage	other biological processes	P	Fatty acid-binding protein homolog 9
ruditapes_lrc40079	transport	transport	P	Fatty acid-binding protein homolog 9
ruditapes_c30487	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein (p254) [Cleaved into: Protein p16; Protein p23; NTPase (EC 3.6.1.15) (2C-like protein) (P2C) (p37); Precursor p41; Protein p29; Protein p23/2; Protein p18; Viral genome-linked protein (VPg) (p13); 3C-like protease (3CLpro) (EC 3.4.22.66) (Calicivirin) (Thiol protease P3C) (p15); RNA-directed RNA polymerase (EC 2.7.7.48) (3Dpol) (p58); Capsid protein VP60]
ruditapes_c30487	viral genome replication	other biological processes	P	Genome polyprotein (p254) [Cleaved into: Protein p16; Protein p23; NTPase (EC 3.6.1.15) (2C-like protein) (P2C) (p37); Precursor p41; Protein p29; Protein p23/2; Protein p18; Viral genome-linked protein (VPg) (p13); 3C-like protease (3CLpro) (EC 3.4.22.66) (Calicivirin) (Thiol protease P3C) (p15); RNA-directed RNA polymerase (EC 2.7.7.48) (3Dpol) (p58); Capsid protein VP60]
ruditapes_c30487	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein (p254) [Cleaved into: Protein p16; Protein p23; NTPase (EC 3.6.1.15) (2C-like protein) (P2C) (p37); Precursor p41; Protein p29; Protein p23/2; Protein p18; Viral genome-linked protein (VPg) (p13); 3C-like protease (3CLpro) (EC 3.4.22.66) (Calicivirin) (Thiol protease P3C) (p15); RNA-directed RNA polymerase (EC 2.7.7.48) (3Dpol) (p58); Capsid protein VP60]
ruditapes_c30487	proteolysis	protein metabolism	P	Genome polyprotein (p254) [Cleaved into: Protein p16; Protein p23; NTPase (EC 3.6.1.15) (2C-like protein) (P2C) (p37); Precursor p41; Protein p29; Protein p23/2; Protein p18; Viral genome-linked protein (VPg) (p13); 3C-like protease (3CLpro) (EC 3.4.22.66) (Calicivirin) (Thiol protease P3C) (p15); RNA-directed RNA polymerase (EC 2.7.7.48) (3Dpol) (p58); Capsid protein VP60]
ruditapes_c30487	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein (p254) [Cleaved into: Protein p16; Protein p23; NTPase (EC 3.6.1.15) (2C-like protein) (P2C) (p37); Precursor p41; Protein p29; Protein p23/2; Protein p18; Viral genome-linked protein (VPg) (p13); 3C-like protease (3CLpro) (EC 3.4.22.66) (Calicivirin) (Thiol protease P3C) (p15); RNA-directed RNA polymerase (EC 2.7.7.48) (3Dpol) (p58); Capsid protein VP60]
ruditapes_c31373	axon midline choice point recognition	developmental processes	P	Protein turtle
ruditapes_c31373	axon midline choice point recognition	cell organization and biogenesis	P	Protein turtle
ruditapes_c31373	dendrite self-avoidance	other biological processes	P	Protein turtle
ruditapes_c31373	regulation of dendrite morphogenesis	developmental processes	P	Protein turtle
ruditapes_c31373	regulation of dendrite morphogenesis	cell organization and biogenesis	P	Protein turtle
ruditapes_c31373	axonal defasciculation	developmental processes	P	Protein turtle
ruditapes_c31373	axonal defasciculation	cell organization and biogenesis	P	Protein turtle
ruditapes_c31373	flight behavior	other biological processes	P	Protein turtle
ruditapes_c31373	larval behavior	other biological processes	P	Protein turtle
ruditapes_c31373	axon guidance	developmental processes	P	Protein turtle
ruditapes_c31373	axon guidance	cell organization and biogenesis	P	Protein turtle
ruditapes_c31373	adult locomotory behavior	other biological processes	P	Protein turtle
ruditapes_lrc38300	cell adhesion	cell adhesion	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	cell differentiation	other biological processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	cytoskeletal anchoring at plasma membrane	cell organization and biogenesis	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	axonal fasciculation	developmental processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	axonal fasciculation	cell organization and biogenesis	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	embryonic development ending in birth or egg hatching	developmental processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	establishment of mitotic spindle orientation	cell cycle and proliferation	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	establishment of mitotic spindle orientation	cell organization and biogenesis	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	nematode larval development	developmental processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	embryonic development	developmental processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	cell migration involved in gastrulation	developmental processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	locomotion	other biological processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	homophilic cell adhesion	cell adhesion	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	receptor-mediated endocytosis	transport	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	receptor-mediated endocytosis	cell organization and biogenesis	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	body morphogenesis	other biological processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	reproduction	other biological processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	cell migration	other biological processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	multicellular organismal development	developmental processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	dauer entry	developmental processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38300	nervous system development	developmental processes	P	Cadherin-related hmr-1 (Protein Hammerhead)
ruditapes_lrc38358	electron transport chain	other metabolic processes	P	Pyruvate dehydrogenase [NADP(+)] (EC 1.2.1.51) (CpPNO) (Pyruvate:NADP(+) oxidoreductase)
ruditapes_lrc38358	oxidation reduction	other metabolic processes	P	Pyruvate dehydrogenase [NADP(+)] (EC 1.2.1.51) (CpPNO) (Pyruvate:NADP(+) oxidoreductase)
ruditapes_lrc38358	metabolic process	other metabolic processes	P	Pyruvate dehydrogenase [NADP(+)] (EC 1.2.1.51) (CpPNO) (Pyruvate:NADP(+) oxidoreductase)
ruditapes_lrc38358	pyruvate metabolic process	other metabolic processes	P	Pyruvate dehydrogenase [NADP(+)] (EC 1.2.1.51) (CpPNO) (Pyruvate:NADP(+) oxidoreductase)
ruditapes_lrc38358	cellular respiration	other metabolic processes	P	Pyruvate dehydrogenase [NADP(+)] (EC 1.2.1.51) (CpPNO) (Pyruvate:NADP(+) oxidoreductase)
ruditapes_lrc38358	transport	transport	P	Pyruvate dehydrogenase [NADP(+)] (EC 1.2.1.51) (CpPNO) (Pyruvate:NADP(+) oxidoreductase)
ruditapes_lrc11688	regulation of protein localization	other biological processes	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	regulation of lipid storage	other biological processes	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	protein stabilization	protein metabolism	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	interspecies interaction between organisms	other biological processes	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	vasculature development	developmental processes	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	"regulation of transcription, DNA-dependent"	RNA metabolism	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	cellular response to UV	other biological processes	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	positive regulation of ERK1 and ERK2 cascade	signal transduction	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	"transcription, DNA-dependent"	RNA metabolism	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	Notch signaling pathway	signal transduction	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	sister chromatid cohesion	cell organization and biogenesis	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	negative regulation of triglyceride biosynthetic process	other metabolic processes	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	negative regulation of DNA endoreduplication	cell cycle and proliferation	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	negative regulation of DNA endoreduplication	DNA metabolism	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	response to DNA damage stimulus	stress response	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	positive regulation of epidermal growth factor receptor activity	signal transduction	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	positive regulation of epidermal growth factor receptor activity	other metabolic processes	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	negative regulation of Notch signaling pathway	signal transduction	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	protein ubiquitination	protein metabolism	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	lipid homeostasis	other biological processes	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes_lrc11688	sister chromatid cohesion	cell cycle and proliferation	P	F-box/WD repeat-containing protein 7 (Archipelago homolog) (hAgo) (F-box and WD-40 domain-containing protein 7) (F-box protein FBX30) (SEL-10) (hCdc4)
ruditapes2_c2690	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-24
ruditapes2_c2690	transport	transport	P	Ras-related protein Rab-24
ruditapes2_c2690	protein transport	transport	P	Ras-related protein Rab-24
ruditapes2_c2690	autophagy	other metabolic processes	P	Ras-related protein Rab-24
ruditapes_c19044	nucleotide metabolic process	other metabolic processes	P	7-methylguanosine phosphate-specific 5'-nucleotidase (EC 3.1.3.-) (Cytosolic 5'-nucleotidase 3B) (Cytosolic 5'-nucleotidase III-like protein) (cN-III-like protein) (EC 3.1.3.5)
ruditapes2_lrc4660	microtubule cytoskeleton organization	cell organization and biogenesis	P	Tektin-1
ruditapes_c11717	induction of apoptosis	death	P	Tumor protein p53-inducible nuclear protein 1 (Stress-induced protein) (p53-dependent damage-inducible nuclear protein 1) (p53DINP1)
ruditapes_c11717	apoptosis	death	P	Tumor protein p53-inducible nuclear protein 1 (Stress-induced protein) (p53-dependent damage-inducible nuclear protein 1) (p53DINP1)
ruditapes_c11717	response to stress	stress response	P	Tumor protein p53-inducible nuclear protein 1 (Stress-induced protein) (p53-dependent damage-inducible nuclear protein 1) (p53DINP1)
ruditapes_c11717	cell cycle arrest	cell cycle and proliferation	P	Tumor protein p53-inducible nuclear protein 1 (Stress-induced protein) (p53-dependent damage-inducible nuclear protein 1) (p53DINP1)
ruditapes_c2876	protein targeting to membrane	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c2876	synaptic transmission	cell-cell signaling	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c2876	establishment of cell polarity	cell organization and biogenesis	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c2876	Golgi to transport vesicle transport	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c2876	membrane biogenesis	other biological processes	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c2876	positive regulation of calcium-mediated signaling	signal transduction	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c2876	vesicle docking during exocytosis	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c2876	regulation of protein transport	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c2876	oligodendrocyte differentiation	developmental processes	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c2876	protein transport	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c2876	exocytosis	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes_c2876	transport	transport	P	Exocyst complex component 4 (Exocyst complex component Sec8)
ruditapes2_c3220	mRNA processing	RNA metabolism	P	Protein mago nashi homolog 2
ruditapes2_c3220	RNA splicing	RNA metabolism	P	Protein mago nashi homolog 2
ruditapes_c6698	mRNA transport	transport	P	Protein mago nashi homolog 2
ruditapes_c6698	transport	transport	P	Protein mago nashi homolog 2
ruditapes_c6698	RNA splicing	RNA metabolism	P	Protein mago nashi homolog 2
ruditapes2_c3333	RNA splicing	RNA metabolism	P	Protein mago nashi homolog 2
ruditapes_c6698	mRNA processing	RNA metabolism	P	Protein mago nashi homolog 2
ruditapes2_c3333	mRNA transport	transport	P	Protein mago nashi homolog 2
ruditapes2_c3333	mRNA processing	RNA metabolism	P	Protein mago nashi homolog 2
ruditapes2_c3333	transport	transport	P	Protein mago nashi homolog 2
ruditapes2_c3220	transport	transport	P	Protein mago nashi homolog 2
ruditapes2_c3220	mRNA transport	transport	P	Protein mago nashi homolog 2
ruditapes_c19102	mRNA metabolic process	RNA metabolism	P	Exosome complex component RRP43 (Exosome component 8) (Opa-interacting protein 2) (OIP-2) (Ribosomal RNA-processing protein 43) (p9)
ruditapes_c19102	rRNA processing	RNA metabolism	P	Exosome complex component RRP43 (Exosome component 8) (Opa-interacting protein 2) (OIP-2) (Ribosomal RNA-processing protein 43) (p9)
ruditapes_c19102	biological_process	other biological processes	P	Exosome complex component RRP43 (Exosome component 8) (Opa-interacting protein 2) (OIP-2) (Ribosomal RNA-processing protein 43) (p9)
ruditapes_c19102	RNA metabolic process	RNA metabolism	P	Exosome complex component RRP43 (Exosome component 8) (Opa-interacting protein 2) (OIP-2) (Ribosomal RNA-processing protein 43) (p9)
ruditapes_c19102	"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay"	RNA metabolism	P	Exosome complex component RRP43 (Exosome component 8) (Opa-interacting protein 2) (OIP-2) (Ribosomal RNA-processing protein 43) (p9)
ruditapes_c19102	exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay	RNA metabolism	P	Exosome complex component RRP43 (Exosome component 8) (Opa-interacting protein 2) (OIP-2) (Ribosomal RNA-processing protein 43) (p9)
ruditapes_c19102	gene expression	other metabolic processes	P	Exosome complex component RRP43 (Exosome component 8) (Opa-interacting protein 2) (OIP-2) (Ribosomal RNA-processing protein 43) (p9)
ruditapes_c19102	RNA processing	RNA metabolism	P	Exosome complex component RRP43 (Exosome component 8) (Opa-interacting protein 2) (OIP-2) (Ribosomal RNA-processing protein 43) (p9)
ruditapes_c10365	phagocytosis	transport	P	Engulfment and cell motility protein 3
ruditapes_c10365	phagocytosis	cell organization and biogenesis	P	Engulfment and cell motility protein 3
ruditapes_c10365	apoptosis	death	P	Engulfment and cell motility protein 3
ruditapes2_c916	innate immune response	stress response	P	Probable ATP-dependent RNA helicase DHX58 (EC 3.6.4.13) (Probable ATP-dependent helicase LGP2) (Protein D11Lgp2 homolog) (RIG-I-like receptor 3) (RLR-3) (RIG-I-like receptor LGP2) (RLR)
ruditapes_c3736	carbohydrate metabolic process	other metabolic processes	P	Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)
ruditapes_c3736	hexose metabolic process	other metabolic processes	P	Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)
ruditapes_c9010	DNA fragmentation involved in apoptosis	DNA metabolism	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9010	DNA fragmentation involved in apoptosis	cell organization and biogenesis	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9010	DNA fragmentation involved in apoptosis	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9010	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9943	activation of JUN kinase activity	signal transduction	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9943	activation of JUN kinase activity	stress response	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9943	activation of JUN kinase activity	protein metabolism	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9010	activation of JUN kinase activity	signal transduction	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9010	activation of JUN kinase activity	stress response	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9010	activation of JUN kinase activity	protein metabolism	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9943	DNA fragmentation involved in apoptosis	DNA metabolism	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9943	DNA fragmentation involved in apoptosis	cell organization and biogenesis	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9943	DNA fragmentation involved in apoptosis	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9943	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9010	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c9943	apoptosis	death	P	Baculoviral IAP repeat-containing protein 7 (EC 6.3.2.-) (Kidney inhibitor of apoptosis protein) (KIAP) (Livin) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (RING finger protein 50) [Cleaved into: Baculoviral IAP repeat-containing protein 7 30kDa subunit (Truncated livin) (p30-Livin) (tLivin)]
ruditapes_c18540	transport	transport	P	Probable RNA polymerase II nuclear localization protein SLC7A6OS (ADAMS proteinase-related protein) (Solute carrier family 7 member 6 opposite strand transcript)
ruditapes_c18540	protein transport	transport	P	Probable RNA polymerase II nuclear localization protein SLC7A6OS (ADAMS proteinase-related protein) (Solute carrier family 7 member 6 opposite strand transcript)
ruditapes_c4686	interspecies interaction between organisms	other biological processes	P	Hepatitis A virus cellular receptor 1 (HAVcr-1) (Kidney injury molecule 1) (KIM-1) (T-cell immunoglobulin and mucin domain-containing protein 1) (TIMD-1) (T-cell membrane protein 1) (TIM-1) (TIM)
ruditapes2_c104	stem cell development	other biological processes	P	RNA-binding protein Musashi homolog 2 (Musashi-2)
ruditapes2_lrc5269	regulation of Rab GTPase activity	signal transduction	P	WD repeat-containing protein 67
ruditapes2_lrc5269	positive regulation of Rab GTPase activity	signal transduction	P	WD repeat-containing protein 67
ruditapes_c15746	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 10 (Zinc finger protein RIN ZF)
ruditapes_c4358	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 10 (Zinc finger protein RIN ZF)
ruditapes_c4358	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 10 (Zinc finger protein RIN ZF)
ruditapes_c15746	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Zinc finger and BTB domain-containing protein 10 (Zinc finger protein RIN ZF)
ruditapes_c15746	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 10 (Zinc finger protein RIN ZF)
ruditapes_c4358	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Zinc finger and BTB domain-containing protein 10 (Zinc finger protein RIN ZF)
ruditapes_c18581	proteolysis	protein metabolism	P	"Metalloendopeptidase OMA1, mitochondrial (EC 3.4.24.-) (Metalloprotease-related protein 1) (MPRP-1) (Overlapping with the m-AAA protease 1 homolog)"
ruditapes_c16945	regulation of cell proliferation	cell cycle and proliferation	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	cellular response to hydrogen peroxide	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of protein kinase B signaling cascade	signal transduction	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of phosphorylation	other metabolic processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	spermatogenesis	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	chromatin silencing	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	"negative regulation of DNA damage response, signal transduction by p53 class mediator"	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	triglyceride mobilization	other metabolic processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of caspase activity	death	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of cell proliferation	cell cycle and proliferation	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of transcription factor activity	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	interspecies interaction between organisms	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	"negative regulation of DNA damage response, signal transduction by p53 class mediator"	signal transduction	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	DNA repair	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	DNA repair	DNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	ovulation from ovarian follicle	developmental processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	regulation of apoptosis	death	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	protein destabilization	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	white fat cell differentiation	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	signal transduction	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis"	death	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	protein ubiquitination	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	muscle organ development	developmental processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	protein amino acid ADP-ribosylation	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	response to oxidative stress	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	apoptosis	death	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	regulation of glucose metabolic process	other metabolic processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	"transcription, DNA-dependent"	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of apoptosis	death	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of adaptive immune response	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	cellular response to starvation	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of prostaglandin biosynthetic process	other metabolic processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of cell growth	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	response to DNA damage stimulus	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	peptidyl-lysine acetylation	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	DNA synthesis during DNA repair	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	DNA synthesis during DNA repair	DNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	DNA replication	DNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	multicellular organismal development	developmental processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of cholesterol efflux	transport	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	peptidyl-lysine deacetylation	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	establishment of chromatin silencing	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	establishment of chromatin silencing	cell organization and biogenesis	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	regulation of response to stress	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	regulation of mitotic cell cycle	cell cycle and proliferation	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	methylation-dependent chromatin silencing	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	methylation-dependent chromatin silencing	cell organization and biogenesis	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of fat cell differentiation	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	rRNA processing	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	cell differentiation	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	maintenance of chromatin silencing	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	maintenance of chromatin silencing	cell organization and biogenesis	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of insulin receptor signaling pathway	signal transduction	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	angiogenesis	developmental processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of DNA repair	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of DNA repair	DNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of helicase activity	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	fatty acid homeostasis	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of protein amino acid phosphorylation	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	single strand break repair	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	single strand break repair	DNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	chromatin silencing at rDNA	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	"regulation of protein import into nucleus, translocation"	transport	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of apoptosis	death	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	response to insulin stimulus	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	pyrimidine dimer repair by nucleotide-excision repair	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	pyrimidine dimer repair by nucleotide-excision repair	DNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of anti-apoptosis	death	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	histone deacetylation	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	histone deacetylation	cell organization and biogenesis	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	regulation of endodeoxyribonuclease activity	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	regulation of smooth muscle cell apoptosis	death	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	"regulation of transcription, DNA-dependent"	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of MHC class II biosynthetic process	other metabolic processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	protein amino acid deacetylation	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	cell aging	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	negative regulation of TOR signaling pathway	signal transduction	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	cellular glucose homeostasis	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	cholesterol homeostasis	other biological processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of chromatin silencing	RNA metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of chromatin silencing	cell organization and biogenesis	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of macroautophagy	stress response	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	positive regulation of macroautophagy	other metabolic processes	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c16945	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
ruditapes_c19689	viral reproduction	other biological processes	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	M phase of mitotic cell cycle	cell cycle and proliferation	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	regulation of glucose transport	transport	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	glucose transport	transport	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	cell cycle	cell cycle and proliferation	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	carbohydrate metabolic process	other metabolic processes	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	attachment of spindle microtubules to kinetochore during mitosis	cell cycle and proliferation	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	attachment of spindle microtubules to kinetochore during mitosis	cell organization and biogenesis	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	mRNA transport	transport	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	transport	transport	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	cytokine-mediated signaling pathway	signal transduction	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	protein transport	transport	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	mitotic metaphase plate congression	cell organization and biogenesis	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	cell division	other biological processes	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	hexose transport	transport	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	mitosis	cell cycle and proliferation	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	mitosis	cell organization and biogenesis	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	transmembrane transport	transport	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	mitotic metaphase plate congression	cell cycle and proliferation	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	mitotic cell cycle	cell cycle and proliferation	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	chromosome segregation	other biological processes	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	mitotic prometaphase	cell cycle and proliferation	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	mitotic prometaphase	cell organization and biogenesis	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_c19689	nuclear pore organization	cell organization and biogenesis	P	Nucleoporin SEH1 (Nup107-160 subcomplex subunit SEH1) (SEC13-like protein)
ruditapes_lrc7926	"transcription, DNA-dependent"	RNA metabolism	P	Constitutive coactivator of peroxisome proliferator-activated receptor gamma (Constitutive coactivator of PPAR-gamma) (Constitutive coactivator of PPARG) (PPARG constitutive coactivator 1) (PGCC1) (Protein FAM120B)
ruditapes_lrc7926	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Constitutive coactivator of peroxisome proliferator-activated receptor gamma (Constitutive coactivator of PPAR-gamma) (Constitutive coactivator of PPARG) (PPARG constitutive coactivator 1) (PGCC1) (Protein FAM120B)
ruditapes_lrc7926	cell differentiation	other biological processes	P	Constitutive coactivator of peroxisome proliferator-activated receptor gamma (Constitutive coactivator of PPAR-gamma) (Constitutive coactivator of PPARG) (PPARG constitutive coactivator 1) (PGCC1) (Protein FAM120B)
ruditapes_lrc13055	transport	transport	P	Sodium/bile acid cotransporter 4 (Na(+)/bile acid cotransporter 4) (Solute carrier family 10 member 4)
ruditapes_lrc13055	ion transport	transport	P	Sodium/bile acid cotransporter 4 (Na(+)/bile acid cotransporter 4) (Solute carrier family 10 member 4)
ruditapes_lrc13055	sodium ion transport	transport	P	Sodium/bile acid cotransporter 4 (Na(+)/bile acid cotransporter 4) (Solute carrier family 10 member 4)
ruditapes2_c739	cell cycle	cell cycle and proliferation	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	mitosis	cell cycle and proliferation	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	mitosis	cell organization and biogenesis	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	double-strand break repair	stress response	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	double-strand break repair	DNA metabolism	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	mitotic sister chromatid cohesion	cell cycle and proliferation	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	mitotic sister chromatid cohesion	cell organization and biogenesis	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	interphase of mitotic cell cycle	cell cycle and proliferation	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	mitotic metaphase plate congression	cell cycle and proliferation	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	mitotic metaphase plate congression	cell organization and biogenesis	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	cell division	other biological processes	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	mitotic chromosome condensation	cell cycle and proliferation	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes2_c739	mitotic chromosome condensation	cell organization and biogenesis	P	Sororin (Cell division cycle-associated protein 5) (p35)
ruditapes_c11762	multicellular organismal development	developmental processes	P	Polycomb protein SCMH1 (Sex comb on midleg homolog 1)
ruditapes_c11762	anatomical structure morphogenesis	other biological processes	P	Polycomb protein SCMH1 (Sex comb on midleg homolog 1)
ruditapes_c11762	gene silencing	other metabolic processes	P	Polycomb protein SCMH1 (Sex comb on midleg homolog 1)
ruditapes_c11762	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Polycomb protein SCMH1 (Sex comb on midleg homolog 1)
ruditapes_c11762	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Polycomb protein SCMH1 (Sex comb on midleg homolog 1)
ruditapes_c11762	"transcription, DNA-dependent"	RNA metabolism	P	Polycomb protein SCMH1 (Sex comb on midleg homolog 1)
ruditapes2_c2123	cell adhesion	cell adhesion	P	Scavenger receptor class F member 2 (SRECRP-1) (Scavenger receptor expressed by endothelial cells 2 protein) (SREC-II)
ruditapes_c17607	cell adhesion	cell adhesion	P	Scavenger receptor class F member 2 (SRECRP-1) (Scavenger receptor expressed by endothelial cells 2 protein) (SREC-II)
ruditapes_c7693	hippocampus development	developmental processes	P	Brevican core protein (Brain-enriched hyaluronan-binding protein) (BEHAB) (Chondroitin sulfate proteoglycan 7)
ruditapes_c23138	cell adhesion	cell adhesion	P	Brevican core protein (Brain-enriched hyaluronan-binding protein) (BEHAB) (Chondroitin sulfate proteoglycan 7)
ruditapes_c23138	hippocampus development	developmental processes	P	Brevican core protein (Brain-enriched hyaluronan-binding protein) (BEHAB) (Chondroitin sulfate proteoglycan 7)
ruditapes_c7693	regulation of neuronal synaptic plasticity	cell-cell signaling	P	Brevican core protein (Brain-enriched hyaluronan-binding protein) (BEHAB) (Chondroitin sulfate proteoglycan 7)
ruditapes_c23138	regulation of neuronal synaptic plasticity	cell-cell signaling	P	Brevican core protein (Brain-enriched hyaluronan-binding protein) (BEHAB) (Chondroitin sulfate proteoglycan 7)
ruditapes_c7693	cell adhesion	cell adhesion	P	Brevican core protein (Brain-enriched hyaluronan-binding protein) (BEHAB) (Chondroitin sulfate proteoglycan 7)
ruditapes_c1190	mRNA transport	transport	P	THO complex subunit 3 (Tho3) (TEX1 homolog) (hTREX45)
ruditapes_c1190	RNA splicing	RNA metabolism	P	THO complex subunit 3 (Tho3) (TEX1 homolog) (hTREX45)
ruditapes_c1190	mRNA export from nucleus	transport	P	THO complex subunit 3 (Tho3) (TEX1 homolog) (hTREX45)
ruditapes_c1190	mRNA processing	RNA metabolism	P	THO complex subunit 3 (Tho3) (TEX1 homolog) (hTREX45)
ruditapes_c1190	intronless viral mRNA export from host nucleus	transport	P	THO complex subunit 3 (Tho3) (TEX1 homolog) (hTREX45)
ruditapes_c1190	transport	transport	P	THO complex subunit 3 (Tho3) (TEX1 homolog) (hTREX45)
ruditapes_c9858	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes_c9858	microtubule-based movement	other biological processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes_c9558	microtubule-based movement	other biological processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes_c9858	ciliary or flagellar motility	other biological processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes_c9558	ciliary or flagellar motility	other biological processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes_c9558	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 8, axonemal (Axonemal beta dynein heavy chain 8) (Ciliary dynein heavy chain 8)"
ruditapes_c9606	oxidation reduction	other metabolic processes	P	Lysyl oxidase homolog 4 (EC 1.4.3.-) (Lysyl oxidase-like protein 4) (Lysyl oxidase-related protein C)
ruditapes_c12877	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 479 (Zinc finger protein Kr19) (HKr19)
ruditapes_c12877	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 479 (Zinc finger protein Kr19) (HKr19)
ruditapes_c12920	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 469
ruditapes_c12920	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 469
ruditapes_c15041	endoplasmic reticulum membrane fusion	cell organization and biogenesis	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135) (VCP/p47 complex-interacting 135-kDa protein)
ruditapes_c15041	mitosis	cell cycle and proliferation	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135) (VCP/p47 complex-interacting 135-kDa protein)
ruditapes_c15041	mitosis	cell organization and biogenesis	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135) (VCP/p47 complex-interacting 135-kDa protein)
ruditapes_c15041	proteolysis	protein metabolism	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135) (VCP/p47 complex-interacting 135-kDa protein)
ruditapes_c15041	Golgi organization	cell organization and biogenesis	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135) (VCP/p47 complex-interacting 135-kDa protein)
ruditapes_c15041	protein ubiquitination	protein metabolism	P	Deubiquitinating protein VCIP135 (EC 3.4.22.-) (Valosin-containing protein p97/p47 complex-interacting protein 1) (Valosin-containing protein p97/p47 complex-interacting protein p135) (VCP/p47 complex-interacting 135-kDa protein)
ruditapes_c1865	biological_process	other biological processes	P	HHIP-like protein 1
ruditapes_c1865	carbohydrate metabolic process	other metabolic processes	P	HHIP-like protein 1
ruditapes_c23145	negative regulation of apoptosis	death	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	positive regulation of cell growth	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	cellular response to UV	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	response to drug	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	negative regulation of G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	negative regulation of caspase activity	death	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	base-excision repair	stress response	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	base-excision repair	DNA metabolism	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	DNA repair	DNA metabolism	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	response to DNA damage stimulus	stress response	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23145	DNA repair	stress response	P	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)
ruditapes_c23140	protein amino acid ADP-ribosylation	protein metabolism	P	Ecto-ADP-ribosyltransferase 5 (EC 2.4.2.31) (ADP-ribosyltransferase C2 and C3 toxin-like 5) (ARTC5) (Mono(ADP-ribosyl)transferase 5) (NAD(P)(+)--arginine ADP-ribosyltransferase 5)
ruditapes_c5213	protein amino acid phosphorylation	protein metabolism	P	Alpha-protein kinase 3 (EC 2.7.11.-) (Muscle alpha-protein kinase)
ruditapes_c5213	multicellular organismal development	developmental processes	P	Alpha-protein kinase 3 (EC 2.7.11.-) (Muscle alpha-protein kinase)
ruditapes_c5213	heart development	developmental processes	P	Alpha-protein kinase 3 (EC 2.7.11.-) (Muscle alpha-protein kinase)
ruditapes_c5213	phosphorylation	other metabolic processes	P	Alpha-protein kinase 3 (EC 2.7.11.-) (Muscle alpha-protein kinase)
ruditapes2_c2250	proteolysis	protein metabolism	P	"Sentrin-specific protease 8 (EC 3.4.22.68) (Deneddylase-1) (NEDD8-specific protease 1) (Protease, cysteine 2) (Sentrin/SUMO-specific protease SENP8)"
ruditapes_c15267	metabolic process	other metabolic processes	P	Dehydrogenase/reductase SDR family member 1 (EC 1.1.-.-)
ruditapes_c15267	oxidation reduction	other metabolic processes	P	Dehydrogenase/reductase SDR family member 1 (EC 1.1.-.-)
ruditapes_c12814	metabolic process	other metabolic processes	P	Dehydrogenase/reductase SDR family member 1 (EC 1.1.-.-)
ruditapes_c12814	oxidation reduction	other metabolic processes	P	Dehydrogenase/reductase SDR family member 1 (EC 1.1.-.-)
ruditapes_c8751	protein folding	protein metabolism	P	DnaJ homolog subfamily C member 30 (Williams-Beuren syndrome chromosomal region 18 protein)
ruditapes_c14409	cell death	death	P	Protein C9orf72
ruditapes_c12428	cell projection organization	cell organization and biogenesis	P	Adenylate kinase 7 (EC 2.7.4.3)
ruditapes_c12428	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase 7 (EC 2.7.4.3)
ruditapes_c12428	phosphorylation	other metabolic processes	P	Adenylate kinase 7 (EC 2.7.4.3)
ruditapes_c9398	microtubule-based movement	other biological processes	P	Dynein heavy chain domain-containing protein 1 (Dynein heavy chain domain 1-like protein) (Protein CCDC35)
ruditapes_c26218	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Tigger transposable element-derived protein 1
ruditapes_c19390	retinol metabolic process	other metabolic processes	P	Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis retinol dehydrogenase)
ruditapes_c19390	photoreceptor cell maintenance	other biological processes	P	Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis retinol dehydrogenase)
ruditapes_c19390	metabolic process	other metabolic processes	P	Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis retinol dehydrogenase)
ruditapes_c19390	visual perception	other biological processes	P	Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis retinol dehydrogenase)
ruditapes_c19390	oxidation reduction	other metabolic processes	P	Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis retinol dehydrogenase)
ruditapes_c19390	response to stimulus	other biological processes	P	Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis retinol dehydrogenase)
ruditapes_c15485	ion transport	transport	P	Chloride intracellular channel protein 6 (Parchorin)
ruditapes_c15485	transport	transport	P	Chloride intracellular channel protein 6 (Parchorin)
ruditapes_c15485	regulation of transmembrane ion transport	transport	P	Chloride intracellular channel protein 6 (Parchorin)
ruditapes_c15485	chloride transport	transport	P	Chloride intracellular channel protein 6 (Parchorin)
ruditapes_c12138	methylation	other metabolic processes	P	Putative methyltransferase NSUN5 (EC 2.1.1.-) (NOL1-related protein) (NOL1R) (NOL1/NOP2/Sun domain family member 5) (Williams-Beuren syndrome chromosomal region 20A protein)
ruditapes_c19206	G-protein coupled receptor protein signaling pathway	signal transduction	P	Pyroglutamylated RFamide peptide receptor (AQ27) (G-protein coupled receptor 103) (Orexigenic neuropeptide QRFP receptor) (SP9155)
ruditapes_c19206	signal transduction	signal transduction	P	Pyroglutamylated RFamide peptide receptor (AQ27) (G-protein coupled receptor 103) (Orexigenic neuropeptide QRFP receptor) (SP9155)
ruditapes_c19512	defense response to Gram-positive bacterium	stress response	P	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Peptidoglycan recognition protein 2) (Peptidoglycan recognition protein long) (PGRP-L)
ruditapes_c19512	detection of bacterium	other biological processes	P	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Peptidoglycan recognition protein 2) (Peptidoglycan recognition protein long) (PGRP-L)
ruditapes_c19512	peptidoglycan catabolic process	other metabolic processes	P	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Peptidoglycan recognition protein 2) (Peptidoglycan recognition protein long) (PGRP-L)
ruditapes_c19512	innate immune response	stress response	P	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Peptidoglycan recognition protein 2) (Peptidoglycan recognition protein long) (PGRP-L)
ruditapes_c19512	peptide amidation	other metabolic processes	P	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Peptidoglycan recognition protein 2) (Peptidoglycan recognition protein long) (PGRP-L)
ruditapes_c15386	cell cycle	cell cycle and proliferation	P	E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear protein 97) (Nuclear zinc finger protein Np97) (RING finger protein 107) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2)
ruditapes_c15386	cell proliferation	cell cycle and proliferation	P	E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear protein 97) (Nuclear zinc finger protein Np97) (RING finger protein 107) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2)
ruditapes_c15386	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear protein 97) (Nuclear zinc finger protein Np97) (RING finger protein 107) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2)
ruditapes_c15386	ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear protein 97) (Nuclear zinc finger protein Np97) (RING finger protein 107) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2)
ruditapes_c15386	cell differentiation	other biological processes	P	E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear protein 97) (Nuclear zinc finger protein Np97) (RING finger protein 107) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2)
ruditapes_c15386	regulation of cell cycle	cell cycle and proliferation	P	E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear protein 97) (Nuclear zinc finger protein Np97) (RING finger protein 107) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2)
ruditapes_c15386	protein autoubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear protein 97) (Nuclear zinc finger protein Np97) (RING finger protein 107) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2)
ruditapes_c18967	tRNA processing	RNA metabolism	P	Pseudouridylate synthase 7 homolog (EC 5.4.99.-)
ruditapes_c18967	pseudouridine synthesis	RNA metabolism	P	Pseudouridylate synthase 7 homolog (EC 5.4.99.-)
ruditapes_c18967	RNA modification	RNA metabolism	P	Pseudouridylate synthase 7 homolog (EC 5.4.99.-)
ruditapes_c19526	cell differentiation	other biological processes	P	Trafficking protein particle complex subunit 9 (NIK- and IKBKB-binding protein) (Tularik gene 1 protein)
ruditapes_c23183	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	response to stress	stress response	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	DNA repair	stress response	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	mRNA export from nucleus	transport	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	RNA metabolic process	RNA metabolism	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	phosphoinositide phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	gene expression	other metabolic processes	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	peptidyl-serine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	mRNA metabolic process	RNA metabolism	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c23183	protein amino acid autophosphorylation	protein metabolism	P	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (61E3.4) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein)
ruditapes_c31306	transport	transport	P	Sodium-coupled neutral amino acid transporter 2 (Amino acid transporter A2) (Protein 40-9-1) (Solute carrier family 38 member 2) (System A amino acid transporter 2) (System A transporter 1) (System N amino acid transporter 2)
ruditapes_c31306	sodium ion transport	transport	P	Sodium-coupled neutral amino acid transporter 2 (Amino acid transporter A2) (Protein 40-9-1) (Solute carrier family 38 member 2) (System A amino acid transporter 2) (System A transporter 1) (System N amino acid transporter 2)
ruditapes_c31306	transmembrane transport	transport	P	Sodium-coupled neutral amino acid transporter 2 (Amino acid transporter A2) (Protein 40-9-1) (Solute carrier family 38 member 2) (System A amino acid transporter 2) (System A transporter 1) (System N amino acid transporter 2)
ruditapes_c31306	amino acid transport	transport	P	Sodium-coupled neutral amino acid transporter 2 (Amino acid transporter A2) (Protein 40-9-1) (Solute carrier family 38 member 2) (System A amino acid transporter 2) (System A transporter 1) (System N amino acid transporter 2)
ruditapes_c31306	glutamate secretion	transport	P	Sodium-coupled neutral amino acid transporter 2 (Amino acid transporter A2) (Protein 40-9-1) (Solute carrier family 38 member 2) (System A amino acid transporter 2) (System A transporter 1) (System N amino acid transporter 2)
ruditapes_c31306	glutamate secretion	cell-cell signaling	P	Sodium-coupled neutral amino acid transporter 2 (Amino acid transporter A2) (Protein 40-9-1) (Solute carrier family 38 member 2) (System A amino acid transporter 2) (System A transporter 1) (System N amino acid transporter 2)
ruditapes_c31306	synaptic transmission	cell-cell signaling	P	Sodium-coupled neutral amino acid transporter 2 (Amino acid transporter A2) (Protein 40-9-1) (Solute carrier family 38 member 2) (System A amino acid transporter 2) (System A transporter 1) (System N amino acid transporter 2)
ruditapes_c31306	neurotransmitter secretion	transport	P	Sodium-coupled neutral amino acid transporter 2 (Amino acid transporter A2) (Protein 40-9-1) (Solute carrier family 38 member 2) (System A amino acid transporter 2) (System A transporter 1) (System N amino acid transporter 2)
ruditapes_c31306	neurotransmitter secretion	cell-cell signaling	P	Sodium-coupled neutral amino acid transporter 2 (Amino acid transporter A2) (Protein 40-9-1) (Solute carrier family 38 member 2) (System A amino acid transporter 2) (System A transporter 1) (System N amino acid transporter 2)
ruditapes_c31306	ion transport	transport	P	Sodium-coupled neutral amino acid transporter 2 (Amino acid transporter A2) (Protein 40-9-1) (Solute carrier family 38 member 2) (System A amino acid transporter 2) (System A transporter 1) (System N amino acid transporter 2)
ruditapes_c24247	transport	transport	P	Rab-3A-interacting protein (Rab3A-interacting protein) (Rabin-3) (SSX2-interacting protein)
ruditapes_c24247	protein localization in organelle	other biological processes	P	Rab-3A-interacting protein (Rab3A-interacting protein) (Rabin-3) (SSX2-interacting protein)
ruditapes_c24247	cilium assembly	cell organization and biogenesis	P	Rab-3A-interacting protein (Rab3A-interacting protein) (Rabin-3) (SSX2-interacting protein)
ruditapes_c24247	Golgi to plasma membrane transport	transport	P	Rab-3A-interacting protein (Rab3A-interacting protein) (Rabin-3) (SSX2-interacting protein)
ruditapes_c24247	protein transport	transport	P	Rab-3A-interacting protein (Rab3A-interacting protein) (Rabin-3) (SSX2-interacting protein)
ruditapes_c29545	nucleosome assembly	cell organization and biogenesis	P	Histone H2A type 1-A (Histone H2A/r)
ruditapes_c8319	G-protein coupled receptor protein signaling pathway	signal transduction	P	Olfactory receptor 5B12 (Olfactory receptor 5B16) (Olfactory receptor OR11-241)
ruditapes_c8319	sensory perception of smell	other biological processes	P	Olfactory receptor 5B12 (Olfactory receptor 5B16) (Olfactory receptor OR11-241)
ruditapes_c8319	response to stimulus	other biological processes	P	Olfactory receptor 5B12 (Olfactory receptor 5B16) (Olfactory receptor OR11-241)
ruditapes_c8319	signal transduction	signal transduction	P	Olfactory receptor 5B12 (Olfactory receptor 5B16) (Olfactory receptor OR11-241)
ruditapes_c8319	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Olfactory receptor 5B12 (Olfactory receptor 5B16) (Olfactory receptor OR11-241)
ruditapes_c8159	microtubule cytoskeleton organization	cell organization and biogenesis	P	Gamma-tubulin complex component 6 (GCP-6)
ruditapes_c8159	G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	Gamma-tubulin complex component 6 (GCP-6)
ruditapes_c8159	mitotic cell cycle	cell cycle and proliferation	P	Gamma-tubulin complex component 6 (GCP-6)
ruditapes_c8159	microtubule nucleation	cell organization and biogenesis	P	Gamma-tubulin complex component 6 (GCP-6)
ruditapes_c20217	endocytosis	transport	P	Formin-binding protein 1 (Formin-binding protein 17) (hFBP17)
ruditapes_c20217	endocytosis	cell organization and biogenesis	P	Formin-binding protein 1 (Formin-binding protein 17) (hFBP17)
ruditapes_c20217	nervous system development	developmental processes	P	Formin-binding protein 1 (Formin-binding protein 17) (hFBP17)
ruditapes_c12071	response to stimulus	other biological processes	P	Hemicentin-1 (Fibulin-6) (FIBL-6)
ruditapes_c12071	visual perception	other biological processes	P	Hemicentin-1 (Fibulin-6) (FIBL-6)
ruditapes_c14661	response to stimulus	other biological processes	P	Hemicentin-1 (Fibulin-6) (FIBL-6)
ruditapes_c14661	visual perception	other biological processes	P	Hemicentin-1 (Fibulin-6) (FIBL-6)
ruditapes_c9200	response to stimulus	other biological processes	P	Hemicentin-1 (Fibulin-6) (FIBL-6)
ruditapes_c17582	response to stimulus	other biological processes	P	Hemicentin-1 (Fibulin-6) (FIBL-6)
ruditapes_c9200	visual perception	other biological processes	P	Hemicentin-1 (Fibulin-6) (FIBL-6)
ruditapes_c17582	visual perception	other biological processes	P	Hemicentin-1 (Fibulin-6) (FIBL-6)
ruditapes_c19330	protein amino acid phosphorylation	protein metabolism	P	TP53-regulating kinase (EC 2.7.11.1) (Nori-2) (p53-related protein kinase)
ruditapes_c19330	phosphorylation	other metabolic processes	P	TP53-regulating kinase (EC 2.7.11.1) (Nori-2) (p53-related protein kinase)
ruditapes_c19330	lipopolysaccharide biosynthetic process	other metabolic processes	P	TP53-regulating kinase (EC 2.7.11.1) (Nori-2) (p53-related protein kinase)
ruditapes_c17420	cell adhesion	cell adhesion	P	Probable carboxypeptidase X1 (EC 3.4.17.-) (Metallocarboxypeptidase CPX-1)
ruditapes_c17420	proteolysis	protein metabolism	P	Probable carboxypeptidase X1 (EC 3.4.17.-) (Metallocarboxypeptidase CPX-1)
ruditapes_c25658	RNA modification	RNA metabolism	P	CDK5 regulatory subunit-associated protein 1 (CDK5 activator-binding protein C42)
ruditapes_c25658	negative regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	CDK5 regulatory subunit-associated protein 1 (CDK5 activator-binding protein C42)
ruditapes_c25658	negative regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	CDK5 regulatory subunit-associated protein 1 (CDK5 activator-binding protein C42)
ruditapes_c25658	biopolymer modification	other metabolic processes	P	CDK5 regulatory subunit-associated protein 1 (CDK5 activator-binding protein C42)
ruditapes_c25658	tRNA modification	RNA metabolism	P	CDK5 regulatory subunit-associated protein 1 (CDK5 activator-binding protein C42)
ruditapes_c25658	brain development	developmental processes	P	CDK5 regulatory subunit-associated protein 1 (CDK5 activator-binding protein C42)
ruditapes_c25658	regulation of neuron differentiation	developmental processes	P	CDK5 regulatory subunit-associated protein 1 (CDK5 activator-binding protein C42)
ruditapes_c28104	cell cycle	cell cycle and proliferation	P	E3 ubiquitin-protein ligase UHRF1 (EC 6.3.2.-) (Inverted CCAAT box-binding protein of 90 kDa) (Nuclear protein 95) (Nuclear zinc finger protein Np95) (HuNp95) (hNp95) (RING finger protein 106) (Transcription factor ICBP90) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (hUHRF1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)
ruditapes_c28104	positive regulation of cellular protein metabolic process	protein metabolism	P	E3 ubiquitin-protein ligase UHRF1 (EC 6.3.2.-) (Inverted CCAAT box-binding protein of 90 kDa) (Nuclear protein 95) (Nuclear zinc finger protein Np95) (HuNp95) (hNp95) (RING finger protein 106) (Transcription factor ICBP90) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (hUHRF1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)
ruditapes_c28104	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase UHRF1 (EC 6.3.2.-) (Inverted CCAAT box-binding protein of 90 kDa) (Nuclear protein 95) (Nuclear zinc finger protein Np95) (HuNp95) (hNp95) (RING finger protein 106) (Transcription factor ICBP90) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (hUHRF1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)
ruditapes_c28104	cell proliferation	cell cycle and proliferation	P	E3 ubiquitin-protein ligase UHRF1 (EC 6.3.2.-) (Inverted CCAAT box-binding protein of 90 kDa) (Nuclear protein 95) (Nuclear zinc finger protein Np95) (HuNp95) (hNp95) (RING finger protein 106) (Transcription factor ICBP90) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (hUHRF1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)
ruditapes_c28104	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase UHRF1 (EC 6.3.2.-) (Inverted CCAAT box-binding protein of 90 kDa) (Nuclear protein 95) (Nuclear zinc finger protein Np95) (HuNp95) (hNp95) (RING finger protein 106) (Transcription factor ICBP90) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (hUHRF1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)
ruditapes_c28104	DNA repair	stress response	P	E3 ubiquitin-protein ligase UHRF1 (EC 6.3.2.-) (Inverted CCAAT box-binding protein of 90 kDa) (Nuclear protein 95) (Nuclear zinc finger protein Np95) (HuNp95) (hNp95) (RING finger protein 106) (Transcription factor ICBP90) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (hUHRF1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)
ruditapes_c28104	DNA repair	DNA metabolism	P	E3 ubiquitin-protein ligase UHRF1 (EC 6.3.2.-) (Inverted CCAAT box-binding protein of 90 kDa) (Nuclear protein 95) (Nuclear zinc finger protein Np95) (HuNp95) (hNp95) (RING finger protein 106) (Transcription factor ICBP90) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (hUHRF1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)
ruditapes_c28104	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	E3 ubiquitin-protein ligase UHRF1 (EC 6.3.2.-) (Inverted CCAAT box-binding protein of 90 kDa) (Nuclear protein 95) (Nuclear zinc finger protein Np95) (HuNp95) (hNp95) (RING finger protein 106) (Transcription factor ICBP90) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (hUHRF1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)
ruditapes_c28104	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase UHRF1 (EC 6.3.2.-) (Inverted CCAAT box-binding protein of 90 kDa) (Nuclear protein 95) (Nuclear zinc finger protein Np95) (HuNp95) (hNp95) (RING finger protein 106) (Transcription factor ICBP90) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (hUHRF1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)
ruditapes_lrc9922	response to stress	stress response	P	Heat shock protein homolog SSE1 (Chaperone protein MSI3)
ruditapes_lrc35643	trehalose biosynthetic process	other metabolic processes	P	"Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) (Trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase)"
ruditapes_c4512	trehalose biosynthetic process	other metabolic processes	P	"Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) (Trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase)"
ruditapes_c25896	tyrosine catabolic process	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) (EC 1.13.11.27)
ruditapes_c25896	aromatic amino acid family metabolic process	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) (EC 1.13.11.27)
ruditapes_c25896	oxidation reduction	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) (EC 1.13.11.27)
ruditapes_c25896	L-phenylalanine catabolic process	other metabolic processes	P	4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) (EC 1.13.11.27)
ruditapes_c21643	glutamine catabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c21643	arginine biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c21643	glutamine metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c21643	cellular amino acid biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c21643	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes_c21643	carbamoyl phosphate biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain)
ruditapes2_c719	translation	protein metabolism	P	Leucine--tRNA ligase 2 (EC 6.1.1.4) (Leucyl-tRNA synthetase 2) (LeuRS 2)
ruditapes2_c719	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase 2 (EC 6.1.1.4) (Leucyl-tRNA synthetase 2) (LeuRS 2)
ruditapes2_c719	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase 2 (EC 6.1.1.4) (Leucyl-tRNA synthetase 2) (LeuRS 2)
ruditapes2_c719	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase 2 (EC 6.1.1.4) (Leucyl-tRNA synthetase 2) (LeuRS 2)
ruditapes2_c719	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase 2 (EC 6.1.1.4) (Leucyl-tRNA synthetase 2) (LeuRS 2)
ruditapes_c17878	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c17878	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c17878	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes2_c66	"regulation of transcription, DNA-dependent"	RNA metabolism	P	TATA-box-binding protein (Box A-binding protein) (BAP) (TATA sequence-binding protein) (TBP) (TATA-box factor)
ruditapes2_c66	transcription initiation from RNA polymerase II promoter	RNA metabolism	P	TATA-box-binding protein (Box A-binding protein) (BAP) (TATA sequence-binding protein) (TBP) (TATA-box factor)
ruditapes2_c66	transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	TATA-box-binding protein (Box A-binding protein) (BAP) (TATA sequence-binding protein) (TBP) (TATA-box factor)
ruditapes2_c66	"transcription, DNA-dependent"	RNA metabolism	P	TATA-box-binding protein (Box A-binding protein) (BAP) (TATA sequence-binding protein) (TBP) (TATA-box factor)
ruditapes_c18043	"transcription, DNA-dependent"	RNA metabolism	P	Putative HTH-type transcriptional regulatory protein STK
ruditapes_c18043	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative HTH-type transcriptional regulatory protein STK
ruditapes_c17255	cellular amino acid biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c17255	ornithine metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c17255	cellular amino acid metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c17255	arginine biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c9529	biosynthetic process	other metabolic processes	P	Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1) (NAD(+) diphosphorylase) (NAD(+) pyrophosphorylase) (NMN adenylyltransferase)
ruditapes_c9529	pyridine nucleotide biosynthetic process	other metabolic processes	P	Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1) (NAD(+) diphosphorylase) (NAD(+) pyrophosphorylase) (NMN adenylyltransferase)
ruditapes_c9529	NAD biosynthetic process	other metabolic processes	P	Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1) (NAD(+) diphosphorylase) (NAD(+) pyrophosphorylase) (NMN adenylyltransferase)
ruditapes_s36577	cobalamin biosynthetic process	other metabolic processes	P	"Probable cobyrinic acid A,C-diamide synthase"
ruditapes_s36577	glutamine metabolic process	other metabolic processes	P	"Probable cobyrinic acid A,C-diamide synthase"
ruditapes2_c1693	N-terminal protein amino acid acetylation	protein metabolism	P	Uncharacterized N-acetyltransferase STK
ruditapes_lrc6884	translational elongation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_lrc6884	translation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_lrc6884	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_c16873	translation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c16873	phenylalanyl-tRNA aminoacylation	protein metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c16873	phenylalanyl-tRNA aminoacylation	RNA metabolism	P	Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS)
ruditapes_c26495	metabolic process	other metabolic processes	P	Probable N-glycosylase/DNA lyase [Includes: 8-oxoguanine DNA glycosylase (EC 3.2.2.-); DNA-(apurinic or apyrimidinic site) lyase (AP lyase) (EC 4.2.99.18)]
ruditapes_c26495	base-excision repair	stress response	P	Probable N-glycosylase/DNA lyase [Includes: 8-oxoguanine DNA glycosylase (EC 3.2.2.-); DNA-(apurinic or apyrimidinic site) lyase (AP lyase) (EC 4.2.99.18)]
ruditapes_c26495	base-excision repair	DNA metabolism	P	Probable N-glycosylase/DNA lyase [Includes: 8-oxoguanine DNA glycosylase (EC 3.2.2.-); DNA-(apurinic or apyrimidinic site) lyase (AP lyase) (EC 4.2.99.18)]
ruditapes_c26495	DNA repair	DNA metabolism	P	Probable N-glycosylase/DNA lyase [Includes: 8-oxoguanine DNA glycosylase (EC 3.2.2.-); DNA-(apurinic or apyrimidinic site) lyase (AP lyase) (EC 4.2.99.18)]
ruditapes_c26495	response to DNA damage stimulus	stress response	P	Probable N-glycosylase/DNA lyase [Includes: 8-oxoguanine DNA glycosylase (EC 3.2.2.-); DNA-(apurinic or apyrimidinic site) lyase (AP lyase) (EC 4.2.99.18)]
ruditapes_c26495	DNA repair	stress response	P	Probable N-glycosylase/DNA lyase [Includes: 8-oxoguanine DNA glycosylase (EC 3.2.2.-); DNA-(apurinic or apyrimidinic site) lyase (AP lyase) (EC 4.2.99.18)]
ruditapes_c2459	translation	protein metabolism	P	50S ribosomal protein L31e
ruditapes2_c682	small GTPase mediated signal transduction	signal transduction	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes2_c682	GTP catabolic process	other metabolic processes	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes2_c682	tRNA processing	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes2_c682	tRNA modification	RNA metabolism	P	tRNA modification GTPase MnmE (EC 3.6.-.-)
ruditapes_c7794	rRNA methylation	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c7794	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c7794	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c12926	carbohydrate metabolic process	other metabolic processes	P	Phospho-alpha-glucosidase PagL (EC 3.2.1.-)
ruditapes_c12926	oxidation reduction	other metabolic processes	P	Phospho-alpha-glucosidase PagL (EC 3.2.1.-)
ruditapes_c12926	metabolic process	other metabolic processes	P	Phospho-alpha-glucosidase PagL (EC 3.2.1.-)
ruditapes_c6412	prolyl-tRNA aminoacylation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c6412	prolyl-tRNA aminoacylation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c6412	tRNA aminoacylation for protein translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c6412	tRNA aminoacylation for protein translation	RNA metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c6412	translation	protein metabolism	P	Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
ruditapes_c28118	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
ruditapes_c2314	translation	protein metabolism	P	Putative ribosomal protein L7Ae-like
ruditapes2_c6246	phosphorylation	other metabolic processes	P	Hydroxyethylthiazole kinase (EC 2.7.1.50) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
ruditapes_c20625	phosphorylation	other metabolic processes	P	Hydroxyethylthiazole kinase (EC 2.7.1.50) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
ruditapes2_c6246	thiamin biosynthetic process	other metabolic processes	P	Hydroxyethylthiazole kinase (EC 2.7.1.50) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
ruditapes_c20625	thiamin biosynthetic process	other metabolic processes	P	Hydroxyethylthiazole kinase (EC 2.7.1.50) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
ruditapes_c20095	metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c20095	carbohydrate phosphorylation	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c20095	phosphorylation	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c20095	carbohydrate metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c20095	galactose metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c18763	purine nucleotide biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c18763	GMP biosynthetic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c18763	glutamine metabolic process	other metabolic processes	P	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)
ruditapes_c20770	spermidine biosynthetic process	other metabolic processes	P	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase beta chain; S-adenosylmethionine decarboxylase alpha chain]
ruditapes_c20770	polyamine biosynthetic process	other metabolic processes	P	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase beta chain; S-adenosylmethionine decarboxylase alpha chain]
ruditapes_lrc16484	double-strand break repair via homologous recombination	stress response	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_lrc16484	double-strand break repair via homologous recombination	DNA metabolism	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_lrc16484	DNA repair	stress response	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_lrc16484	DNA repair	DNA metabolism	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_lrc16484	response to DNA damage stimulus	stress response	P	ATP-dependent helicase/deoxyribonuclease subunit B (EC 3.1.-.-) (EC 3.6.4.12) (ATP-dependent helicase/nuclease AddB)
ruditapes_c24059	peptidoglycan-based cell wall biogenesis	other biological processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 (EC 6.3.2.13) (Meso-A2pm-adding enzyme 1) (Meso-diaminopimelate-adding enzyme 1) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase 1) (UDP-MurNAc-tripeptide synthetase 1) (UDP-N-acetylmuramyl-tripeptide synthetase 1)"
ruditapes_c24059	cell wall organization	cell organization and biogenesis	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 (EC 6.3.2.13) (Meso-A2pm-adding enzyme 1) (Meso-diaminopimelate-adding enzyme 1) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase 1) (UDP-MurNAc-tripeptide synthetase 1) (UDP-N-acetylmuramyl-tripeptide synthetase 1)"
ruditapes_c24059	cell division	other biological processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 (EC 6.3.2.13) (Meso-A2pm-adding enzyme 1) (Meso-diaminopimelate-adding enzyme 1) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase 1) (UDP-MurNAc-tripeptide synthetase 1) (UDP-N-acetylmuramyl-tripeptide synthetase 1)"
ruditapes_c24059	tetrahydrofolylpolyglutamate biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 (EC 6.3.2.13) (Meso-A2pm-adding enzyme 1) (Meso-diaminopimelate-adding enzyme 1) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase 1) (UDP-MurNAc-tripeptide synthetase 1) (UDP-N-acetylmuramyl-tripeptide synthetase 1)"
ruditapes_c24059	peptidoglycan biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 (EC 6.3.2.13) (Meso-A2pm-adding enzyme 1) (Meso-diaminopimelate-adding enzyme 1) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase 1) (UDP-MurNAc-tripeptide synthetase 1) (UDP-N-acetylmuramyl-tripeptide synthetase 1)"
ruditapes_c24059	regulation of cell shape	cell organization and biogenesis	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 (EC 6.3.2.13) (Meso-A2pm-adding enzyme 1) (Meso-diaminopimelate-adding enzyme 1) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase 1) (UDP-MurNAc-tripeptide synthetase 1) (UDP-N-acetylmuramyl-tripeptide synthetase 1)"
ruditapes_c24059	folic acid and derivative biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 (EC 6.3.2.13) (Meso-A2pm-adding enzyme 1) (Meso-diaminopimelate-adding enzyme 1) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase 1) (UDP-MurNAc-tripeptide synthetase 1) (UDP-N-acetylmuramyl-tripeptide synthetase 1)"
ruditapes_c24059	cell cycle	cell cycle and proliferation	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 (EC 6.3.2.13) (Meso-A2pm-adding enzyme 1) (Meso-diaminopimelate-adding enzyme 1) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase 1) (UDP-MurNAc-tripeptide synthetase 1) (UDP-N-acetylmuramyl-tripeptide synthetase 1)"
ruditapes_c24059	biosynthetic process	other metabolic processes	P	"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 (EC 6.3.2.13) (Meso-A2pm-adding enzyme 1) (Meso-diaminopimelate-adding enzyme 1) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase 1) (UDP-MurNAc-tripeptide synthetase 1) (UDP-N-acetylmuramyl-tripeptide synthetase 1)"
ruditapes2_c819	DNA catabolic process	DNA metabolism	P	Exodeoxyribonuclease 7 large subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit)
ruditapes_c21795	DNA repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c21795	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c21795	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutL
ruditapes_c21795	mismatch repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c21795	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c20586	ribosome biogenesis	other biological processes	P	Ribosome maturation factor RimP
ruditapes2_lrc1741	regulation of carbohydrate metabolic process	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes2_lrc1741	protein amino acid phosphorylation	protein metabolism	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes2_lrc1741	phosphorylation	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes2_lrc1741	carbohydrate metabolic process	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes2_lrc1741	two-component signal transduction system (phosphorelay)	signal transduction	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes2_lrc1741	metabolic process	other metabolic processes	P	HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr(Ser) kinase/phosphorylase)
ruditapes2_c3022	oxidation reduction	other metabolic processes	P	FMN-dependent NADH-azoreductase 1 (EC 1.7.-.-) (Azo-dye reductase 1) (FMN-dependent NADH-azo compound oxidoreductase 1)
ruditapes_c27768	ornithine metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c27768	cellular amino acid biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c27768	cellular amino acid metabolic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c27768	arginine biosynthetic process	other metabolic processes	P	Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3)
ruditapes_c15875	cobalamin biosynthetic process	other metabolic processes	P	Cobalamin synthase (EC 2.-.-.-)
ruditapes2_c3137	cobalamin biosynthetic process	other metabolic processes	P	Putative cobalt-precorrin-6A synthase [deacetylating] (EC 2.1.1.-)
ruditapes_c15944	DNA replication	DNA metabolism	P	ORC1-type DNA replication protein 3
ruditapes_c24360	glutamine metabolic process	other metabolic processes	P	7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (Archaeosine biosynthesis protein QueC) (PreQ(0) synthase)
ruditapes_c12889	protein-heme linkage	protein metabolism	P	Cytochrome c-type biogenesis protein CcmE (Cytochrome c maturation protein E) (Heme chaperone CcmE)
ruditapes_c12889	cytochrome complex assembly	cell organization and biogenesis	P	Cytochrome c-type biogenesis protein CcmE (Cytochrome c maturation protein E) (Heme chaperone CcmE)
ruditapes_c22331	smoothened signaling pathway	signal transduction	P	Protein patched homolog 1 (PTC1) (Patched 1)
ruditapes_c22331	negative regulation of muscle development	developmental processes	P	Protein patched homolog 1 (PTC1) (Patched 1)
ruditapes_c22331	cardioblast differentiation	developmental processes	P	Protein patched homolog 1 (PTC1) (Patched 1)
ruditapes_c22331	camera-type eye development	developmental processes	P	Protein patched homolog 1 (PTC1) (Patched 1)
ruditapes_c22331	proximal/distal pattern formation	developmental processes	P	Protein patched homolog 1 (PTC1) (Patched 1)
ruditapes_c22331	retinal ganglion cell axon guidance	developmental processes	P	Protein patched homolog 1 (PTC1) (Patched 1)
ruditapes_c22331	retinal ganglion cell axon guidance	cell organization and biogenesis	P	Protein patched homolog 1 (PTC1) (Patched 1)
ruditapes_c14201	cell adhesion	cell adhesion	P	Opioid-binding protein/cell adhesion molecule homolog (Neurite inhibitor GP55-A) (OBCAM protein gamma isoform)
ruditapes_c6576	steroid metabolic process	other metabolic processes	P	Sortilin-related receptor (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (SorLA) (Fragment)
ruditapes_c6576	lipid transport	transport	P	Sortilin-related receptor (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (SorLA) (Fragment)
ruditapes_c6576	transport	transport	P	Sortilin-related receptor (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (SorLA) (Fragment)
ruditapes_c6576	cholesterol metabolic process	other metabolic processes	P	Sortilin-related receptor (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (SorLA) (Fragment)
ruditapes_c6576	lipid metabolic process	other metabolic processes	P	Sortilin-related receptor (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (SorLA) (Fragment)
ruditapes_c6576	endocytosis	transport	P	Sortilin-related receptor (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (SorLA) (Fragment)
ruditapes_c6576	endocytosis	cell organization and biogenesis	P	Sortilin-related receptor (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (SorLA) (Fragment)
ruditapes_c31435	protein-chromophore linkage	protein metabolism	P	Rhodopsin
ruditapes_c31435	signal transduction	signal transduction	P	Rhodopsin
ruditapes_c31435	response to stimulus	other biological processes	P	Rhodopsin
ruditapes_c31435	visual perception	other biological processes	P	Rhodopsin
ruditapes_c31435	G-protein coupled receptor protein signaling pathway	signal transduction	P	Rhodopsin
ruditapes_c31435	phototransduction	other biological processes	P	Rhodopsin
ruditapes_c23919	glycolysis	other metabolic processes	P	"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (BPG-dependent PGAM) (PGAM) (Phosphoglyceromutase) (dPGM) (EC 5.4.2.1)"
ruditapes_c23919	metabolic process	other metabolic processes	P	"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (BPG-dependent PGAM) (PGAM) (Phosphoglyceromutase) (dPGM) (EC 5.4.2.1)"
ruditapes_c14611	cellular amino acid biosynthetic process	other metabolic processes	P	Glutamate 5-kinase 1 (EC 2.7.2.11) (Gamma-glutamyl kinase 1) (GK 1)
ruditapes_c14611	proline biosynthetic process	other metabolic processes	P	Glutamate 5-kinase 1 (EC 2.7.2.11) (Gamma-glutamyl kinase 1) (GK 1)
ruditapes_c14611	phosphorylation	other metabolic processes	P	Glutamate 5-kinase 1 (EC 2.7.2.11) (Gamma-glutamyl kinase 1) (GK 1)
ruditapes_c24358	glycolysis	other metabolic processes	P	Phosphoglycerate kinase (EC 2.7.2.3)
ruditapes_c24358	phosphorylation	other metabolic processes	P	Phosphoglycerate kinase (EC 2.7.2.3)
ruditapes2_c2780	queuosine biosynthetic process	RNA metabolism	P	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA)
ruditapes_c9352	one-carbon compound metabolic process	other metabolic processes	P	S-adenosylmethionine synthase (AdoMet synthase) (EC 2.5.1.6) (MAT) (Methionine adenosyltransferase)
ruditapes_c9352	S-adenosylmethionine biosynthetic process	other metabolic processes	P	S-adenosylmethionine synthase (AdoMet synthase) (EC 2.5.1.6) (MAT) (Methionine adenosyltransferase)
ruditapes_c15136	NAD biosynthetic process	other metabolic processes	P	NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5)
ruditapes_c22219	base-excision repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c22219	base-excision repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c22219	metabolic process	other metabolic processes	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c22219	DNA repair	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c22219	DNA repair	DNA metabolism	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c22219	response to DNA damage stimulus	stress response	P	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)
ruditapes_c10515	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c10515	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c10515	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c10515	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c28458	methylation	other metabolic processes	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_c28458	tRNA processing	RNA metabolism	P	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_lrc35706	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes_lrc35706	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)
ruditapes_c8802	tRNA processing	RNA metabolism	P	Ribonuclease P protein component (RNase P protein) (RNaseP protein) (EC 3.1.26.5) (Protein C5)
ruditapes_c21498	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c21498	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c21498	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c21498	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c21498	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c18507	oxidation reduction	other metabolic processes	P	DBH-like monooxygenase protein 1 (EC 1.14.17.-) (DBH-related protein) (Monooxygenase X)
ruditapes_c18507	catecholamine metabolic process	other metabolic processes	P	DBH-like monooxygenase protein 1 (EC 1.14.17.-) (DBH-related protein) (Monooxygenase X)
ruditapes_lrc32822	translation	protein metabolism	P	40S ribosomal protein S16
ruditapes_c12864	negative regulation of translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 4E-binding protein 3-like (4E-BP3) (eIF4E-binding protein 3) (Eukaryotic translation initiation factor 4E-1A-binding protein) (4E-BP) (eIF4E-1A-binding protein)
ruditapes_c12864	negative regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4E-binding protein 3-like (4E-BP3) (eIF4E-binding protein 3) (Eukaryotic translation initiation factor 4E-1A-binding protein) (4E-BP) (eIF4E-1A-binding protein)
ruditapes_c12864	regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 4E-binding protein 3-like (4E-BP3) (eIF4E-binding protein 3) (Eukaryotic translation initiation factor 4E-1A-binding protein) (4E-BP) (eIF4E-1A-binding protein)
ruditapes_c12796	methylation	other metabolic processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10); Non-structural protein 11 (nsp11); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c12796	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10); Non-structural protein 11 (nsp11); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c12796	evasion by virus of host immune response	stress response	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10); Non-structural protein 11 (nsp11); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c12796	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10); Non-structural protein 11 (nsp11); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c12796	viral genome replication	other biological processes	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10); Non-structural protein 11 (nsp11); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c12796	viral protein processing	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10); Non-structural protein 11 (nsp11); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c12796	proteolysis	protein metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10); Non-structural protein 11 (nsp11); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c12796	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); Non-structural protein 2 (nsp2); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.-) (PL1-PRO/PL2-PRO) (PLP1/PLP2) (Papain-like proteinases 1/2) (p195); Non-structural protein 4 (nsp4) (Peptide HD2); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (M-PRO) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10); Non-structural protein 11 (nsp11); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (nsp12); Helicase (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (nsp13); Exoribonuclease (ExoN) (EC 3.1.13.-) (nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU) (nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-) (nsp16)]
ruditapes_c7267	"transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A)
ruditapes_c3475	"transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A)
ruditapes_c7267	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A)
ruditapes_c7267	epithelial to mesenchymal transition	cell organization and biogenesis	P	Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A)
ruditapes_c3475	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A)
ruditapes_c7267	epithelial to mesenchymal transition	developmental processes	P	Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A)
ruditapes_c3475	epithelial to mesenchymal transition	developmental processes	P	Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A)
ruditapes_c3475	epithelial to mesenchymal transition	cell organization and biogenesis	P	Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A)
ruditapes_c3475	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A)
ruditapes_c7267	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A)
ruditapes_c12995	cell adhesion	cell adhesion	P	Mucin-4 (MUC-4) (Ascites sialoglycoprotein) (ASGP) (Pancreatic adenocarcinoma mucin) (Testis mucin) (Tracheobronchial mucin) [Cleaved into: Mucin-4 alpha chain (Ascites sialoglycoprotein 1) (ASGP-1); Mucin-4 beta chain (Ascites sialoglycoprotein 2) (ASGP-2)]
ruditapes_c12995	biological_process	other biological processes	P	Mucin-4 (MUC-4) (Ascites sialoglycoprotein) (ASGP) (Pancreatic adenocarcinoma mucin) (Testis mucin) (Tracheobronchial mucin) [Cleaved into: Mucin-4 alpha chain (Ascites sialoglycoprotein 1) (ASGP-1); Mucin-4 beta chain (Ascites sialoglycoprotein 2) (ASGP-2)]
ruditapes_c12995	cell-matrix adhesion	cell adhesion	P	Mucin-4 (MUC-4) (Ascites sialoglycoprotein) (ASGP) (Pancreatic adenocarcinoma mucin) (Testis mucin) (Tracheobronchial mucin) [Cleaved into: Mucin-4 alpha chain (Ascites sialoglycoprotein 1) (ASGP-1); Mucin-4 beta chain (Ascites sialoglycoprotein 2) (ASGP-2)]
ruditapes_c12995	O-glycan processing	protein metabolism	P	Mucin-4 (MUC-4) (Ascites sialoglycoprotein) (ASGP) (Pancreatic adenocarcinoma mucin) (Testis mucin) (Tracheobronchial mucin) [Cleaved into: Mucin-4 alpha chain (Ascites sialoglycoprotein 1) (ASGP-1); Mucin-4 beta chain (Ascites sialoglycoprotein 2) (ASGP-2)]
ruditapes_c12995	post-translational protein modification	protein metabolism	P	Mucin-4 (MUC-4) (Ascites sialoglycoprotein) (ASGP) (Pancreatic adenocarcinoma mucin) (Testis mucin) (Tracheobronchial mucin) [Cleaved into: Mucin-4 alpha chain (Ascites sialoglycoprotein 1) (ASGP-1); Mucin-4 beta chain (Ascites sialoglycoprotein 2) (ASGP-2)]
ruditapes_c12995	cellular protein metabolic process	protein metabolism	P	Mucin-4 (MUC-4) (Ascites sialoglycoprotein) (ASGP) (Pancreatic adenocarcinoma mucin) (Testis mucin) (Tracheobronchial mucin) [Cleaved into: Mucin-4 alpha chain (Ascites sialoglycoprotein 1) (ASGP-1); Mucin-4 beta chain (Ascites sialoglycoprotein 2) (ASGP-2)]
ruditapes_lrc35353	actin filament-based movement	transport	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	neuromuscular process controlling balance	other biological processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	cardiac myofibril assembly	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	cardiac myofibril assembly	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	actin filament-based movement	transport	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	axon guidance	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	cardiac myofibril assembly	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	myofibril assembly	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	myofibril assembly	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	third ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	cerebellar Purkinje cell layer development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	axon guidance	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	brain development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	plasma membrane repair	stress response	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	plasma membrane repair	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	brain development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	cardiac myofibril assembly	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	axonogenesis	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	axonogenesis	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	axonogenesis	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	plasma membrane repair	stress response	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	plasma membrane repair	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	retina development in camera-type eye	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	axonogenesis	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	axonogenesis	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	third ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	brain development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	axonogenesis	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	lateral ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	ventricular cardiac muscle cell development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	neuron migration	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	cerebellar Purkinje cell layer development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	third ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	neuron migration	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	plasma membrane repair	stress response	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	plasma membrane repair	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	cardiac myofibril assembly	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	cardiac myofibril assembly	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	cerebellar Purkinje cell layer development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	actin cytoskeleton organization	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	in utero embryonic development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	neuromuscular process controlling balance	other biological processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	lateral ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	neuron migration	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	myofibril assembly	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	"substrate-bound cell migration, cell extension"	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	cytokinesis after mitosis	cell cycle and proliferation	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	neuron projection development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	neuron projection development	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	cell proliferation	cell cycle and proliferation	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	myofibril assembly	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	myofibril assembly	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	adult heart development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	fourth ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	myofibril assembly	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	fourth ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	cytokinesis after mitosis	cell cycle and proliferation	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	regulation of cell shape	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	exocytosis	transport	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	adult heart development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	adult heart development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	retina development in camera-type eye	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	fourth ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	lateral ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	retina development in camera-type eye	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	actin cytoskeleton organization	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	myofibril assembly	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	myofibril assembly	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	cell proliferation	cell cycle and proliferation	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	actin filament-based movement	transport	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	cytokinesis after mitosis	cell cycle and proliferation	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	axon guidance	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	axon guidance	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	nuclear migration	other biological processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	plasma membrane repair	stress response	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	plasma membrane repair	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	brain development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	in utero embryonic development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	neuron projection development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	neuron projection development	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	exocytosis	transport	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	axonogenesis	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	axon guidance	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	axon guidance	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	regulation of cell shape	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	ventricular cardiac muscle cell development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	cell proliferation	cell cycle and proliferation	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	axon guidance	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	axon guidance	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	"substrate-bound cell migration, cell extension"	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	axonogenesis	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	neuron migration	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	nuclear migration	other biological processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	actin cytoskeleton organization	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	cardiac myofibril assembly	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	cardiac myofibril assembly	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	adult heart development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	regulation of cell shape	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	fourth ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	actin cytoskeleton organization	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	"substrate-bound cell migration, cell extension"	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	exocytosis	transport	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	neuron projection development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	neuron projection development	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	lateral ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	ventricular cardiac muscle cell development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	nuclear migration	other biological processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	cerebellar Purkinje cell layer development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	in utero embryonic development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	retina development in camera-type eye	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	cytokinesis after mitosis	cell cycle and proliferation	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	exocytosis	transport	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	cell proliferation	cell cycle and proliferation	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	neuron projection development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	neuron projection development	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes2_c3140	actin filament-based movement	transport	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	neuromuscular process controlling balance	other biological processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	in utero embryonic development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	ventricular cardiac muscle cell development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	nuclear migration	other biological processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c6602	third ventricle development	developmental processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c20186	regulation of cell shape	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	neuromuscular process controlling balance	other biological processes	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_lrc35353	"substrate-bound cell migration, cell extension"	cell organization and biogenesis	P	"Myosin heavy chain, embryonic smooth muscle isoform (Fragment)"
ruditapes_c10283	peptidoglycan catabolic process	other metabolic processes	P	Probable N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Autolysin) (Cell wall hydrolase) (ORFL3)
ruditapes_c10283	cell wall organization	cell organization and biogenesis	P	Probable N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Autolysin) (Cell wall hydrolase) (ORFL3)
ruditapes_c10283	metabolic process	other metabolic processes	P	Probable N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (Autolysin) (Cell wall hydrolase) (ORFL3)
ruditapes_c22591	cell wall organization	cell organization and biogenesis	P	Chitin synthase 3 (EC 2.4.1.16) (Chitin synthase I) (Chitin-UDP acetyl-glucosaminyl transferase 3)
ruditapes_c22591	chitin biosynthetic process	other metabolic processes	P	Chitin synthase 3 (EC 2.4.1.16) (Chitin synthase I) (Chitin-UDP acetyl-glucosaminyl transferase 3)
ruditapes_c30354	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor BRR1 (Bad response to refrigeration protein 1)
ruditapes_c30354	spliceosome assembly	RNA metabolism	P	Pre-mRNA-splicing factor BRR1 (Bad response to refrigeration protein 1)
ruditapes_c30354	spliceosome assembly	cell organization and biogenesis	P	Pre-mRNA-splicing factor BRR1 (Bad response to refrigeration protein 1)
ruditapes_c30354	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor BRR1 (Bad response to refrigeration protein 1)
ruditapes_c29769	glutamate decarboxylation to succinate	other metabolic processes	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c29769	glutamate catabolic process	other metabolic processes	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c29769	carboxylic acid metabolic process	other metabolic processes	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c29769	synaptic transmission	cell-cell signaling	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c29769	neurotransmitter biosynthetic process	other metabolic processes	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c29769	neurotransmitter biosynthetic process	cell-cell signaling	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c29769	protein-pyridoxal-5-phosphate linkage	protein metabolism	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c29769	response to drug	other biological processes	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c29769	neurotransmitter secretion	transport	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c29769	neurotransmitter secretion	cell-cell signaling	P	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)
ruditapes_c17506	response to stress	stress response	P	Protein HPH1 (Functionally related to TCP1 protein 1) (High pH protein 1)
ruditapes_c2013	"transcription, DNA-dependent"	RNA metabolism	P	C-Myc-binding protein (Associate of Myc 1) (AMY-1)
ruditapes_c2013	spermatogenesis	other biological processes	P	C-Myc-binding protein (Associate of Myc 1) (AMY-1)
ruditapes_c2013	"regulation of transcription, DNA-dependent"	RNA metabolism	P	C-Myc-binding protein (Associate of Myc 1) (AMY-1)
ruditapes2_c1615	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Prefoldin subunit 5 (C-Myc-binding protein Mm-1) (Myc modulator 1)
ruditapes2_c1615	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Prefoldin subunit 5 (C-Myc-binding protein Mm-1) (Myc modulator 1)
ruditapes2_c1615	protein folding	protein metabolism	P	Prefoldin subunit 5 (C-Myc-binding protein Mm-1) (Myc modulator 1)
ruditapes2_c1615	cellular protein metabolic process	protein metabolism	P	Prefoldin subunit 5 (C-Myc-binding protein Mm-1) (Myc modulator 1)
ruditapes2_c1615	'de novo' posttranslational protein folding	protein metabolism	P	Prefoldin subunit 5 (C-Myc-binding protein Mm-1) (Myc modulator 1)
ruditapes_c23516	DNA damage checkpoint	cell cycle and proliferation	P	Cell cycle checkpoint control protein RAD9A (hRAD9) (EC 3.1.11.2) (DNA repair exonuclease rad9 homolog A)
ruditapes_c23516	DNA damage checkpoint	signal transduction	P	Cell cycle checkpoint control protein RAD9A (hRAD9) (EC 3.1.11.2) (DNA repair exonuclease rad9 homolog A)
ruditapes_c23516	DNA damage checkpoint	stress response	P	Cell cycle checkpoint control protein RAD9A (hRAD9) (EC 3.1.11.2) (DNA repair exonuclease rad9 homolog A)
ruditapes_c23516	DNA repair	stress response	P	Cell cycle checkpoint control protein RAD9A (hRAD9) (EC 3.1.11.2) (DNA repair exonuclease rad9 homolog A)
ruditapes_c23516	DNA repair	DNA metabolism	P	Cell cycle checkpoint control protein RAD9A (hRAD9) (EC 3.1.11.2) (DNA repair exonuclease rad9 homolog A)
ruditapes_c23516	response to DNA damage stimulus	stress response	P	Cell cycle checkpoint control protein RAD9A (hRAD9) (EC 3.1.11.2) (DNA repair exonuclease rad9 homolog A)
ruditapes_c23516	DNA replication	DNA metabolism	P	Cell cycle checkpoint control protein RAD9A (hRAD9) (EC 3.1.11.2) (DNA repair exonuclease rad9 homolog A)
ruditapes_c23516	DNA replication checkpoint	cell cycle and proliferation	P	Cell cycle checkpoint control protein RAD9A (hRAD9) (EC 3.1.11.2) (DNA repair exonuclease rad9 homolog A)
ruditapes_c23516	DNA replication checkpoint	DNA metabolism	P	Cell cycle checkpoint control protein RAD9A (hRAD9) (EC 3.1.11.2) (DNA repair exonuclease rad9 homolog A)
ruditapes_c23516	positive regulation of apoptosis	death	P	Cell cycle checkpoint control protein RAD9A (hRAD9) (EC 3.1.11.2) (DNA repair exonuclease rad9 homolog A)
ruditapes_c23516	cell cycle checkpoint	cell cycle and proliferation	P	Cell cycle checkpoint control protein RAD9A (hRAD9) (EC 3.1.11.2) (DNA repair exonuclease rad9 homolog A)
ruditapes_c7220	skeletal system development	developmental processes	P	Collagen alpha-1(XII) chain
ruditapes_c401	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(XII) chain
ruditapes_c8879	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(XII) chain
ruditapes_c8879	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain
ruditapes_s37699	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(XII) chain
ruditapes_c36565	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(XII) chain
ruditapes_c36565	skeletal system development	developmental processes	P	Collagen alpha-1(XII) chain
ruditapes_s37699	skeletal system development	developmental processes	P	Collagen alpha-1(XII) chain
ruditapes_c8879	skeletal system development	developmental processes	P	Collagen alpha-1(XII) chain
ruditapes_c401	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain
ruditapes_c7220	collagen fibril organization	cell organization and biogenesis	P	Collagen alpha-1(XII) chain
ruditapes_c36565	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain
ruditapes_c401	skeletal system development	developmental processes	P	Collagen alpha-1(XII) chain
ruditapes_s37699	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain
ruditapes_c7220	cell adhesion	cell adhesion	P	Collagen alpha-1(XII) chain
ruditapes_c23942	signal transduction	signal transduction	P	Neuronal PAS domain-containing protein 2 (Neuronal PAS2) (Basic-helix-loop-helix-PAS protein MOP4) (Class E basic helix-loop-helix protein 9) (bHLHe9) (Member of PAS protein 4) (PAS domain-containing protein 4)
ruditapes_c23942	"transcription, DNA-dependent"	RNA metabolism	P	Neuronal PAS domain-containing protein 2 (Neuronal PAS2) (Basic-helix-loop-helix-PAS protein MOP4) (Class E basic helix-loop-helix protein 9) (bHLHe9) (Member of PAS protein 4) (PAS domain-containing protein 4)
ruditapes_c23942	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Neuronal PAS domain-containing protein 2 (Neuronal PAS2) (Basic-helix-loop-helix-PAS protein MOP4) (Class E basic helix-loop-helix protein 9) (bHLHe9) (Member of PAS protein 4) (PAS domain-containing protein 4)
ruditapes_c23942	cellular lipid metabolic process	other metabolic processes	P	Neuronal PAS domain-containing protein 2 (Neuronal PAS2) (Basic-helix-loop-helix-PAS protein MOP4) (Class E basic helix-loop-helix protein 9) (bHLHe9) (Member of PAS protein 4) (PAS domain-containing protein 4)
ruditapes_c23942	central nervous system development	developmental processes	P	Neuronal PAS domain-containing protein 2 (Neuronal PAS2) (Basic-helix-loop-helix-PAS protein MOP4) (Class E basic helix-loop-helix protein 9) (bHLHe9) (Member of PAS protein 4) (PAS domain-containing protein 4)
ruditapes_c23942	rhythmic process	other biological processes	P	Neuronal PAS domain-containing protein 2 (Neuronal PAS2) (Basic-helix-loop-helix-PAS protein MOP4) (Class E basic helix-loop-helix protein 9) (bHLHe9) (Member of PAS protein 4) (PAS domain-containing protein 4)
ruditapes_c23942	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Neuronal PAS domain-containing protein 2 (Neuronal PAS2) (Basic-helix-loop-helix-PAS protein MOP4) (Class E basic helix-loop-helix protein 9) (bHLHe9) (Member of PAS protein 4) (PAS domain-containing protein 4)
ruditapes_c19434	protein stabilization	protein metabolism	P	Gamma-soluble NSF attachment protein (SNAP-gamma) (N-ethylmaleimide-sensitive factor attachment protein gamma)
ruditapes_c19434	intracellular protein transport	transport	P	Gamma-soluble NSF attachment protein (SNAP-gamma) (N-ethylmaleimide-sensitive factor attachment protein gamma)
ruditapes_c19434	vesicle-mediated transport	transport	P	Gamma-soluble NSF attachment protein (SNAP-gamma) (N-ethylmaleimide-sensitive factor attachment protein gamma)
ruditapes_c19434	protein transport	transport	P	Gamma-soluble NSF attachment protein (SNAP-gamma) (N-ethylmaleimide-sensitive factor attachment protein gamma)
ruditapes_c19434	transport	transport	P	Gamma-soluble NSF attachment protein (SNAP-gamma) (N-ethylmaleimide-sensitive factor attachment protein gamma)
ruditapes_c19434	membrane fusion	cell organization and biogenesis	P	Gamma-soluble NSF attachment protein (SNAP-gamma) (N-ethylmaleimide-sensitive factor attachment protein gamma)
ruditapes_c19434	intra-Golgi vesicle-mediated transport	transport	P	Gamma-soluble NSF attachment protein (SNAP-gamma) (N-ethylmaleimide-sensitive factor attachment protein gamma)
ruditapes_c19434	protein complex assembly	cell organization and biogenesis	P	Gamma-soluble NSF attachment protein (SNAP-gamma) (N-ethylmaleimide-sensitive factor attachment protein gamma)
ruditapes_c22050	citrate metabolic process	other metabolic processes	P	"Aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c22050	metabolic process	other metabolic processes	P	"Aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c22050	isocitrate metabolic process	other metabolic processes	P	"Aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c22050	generation of precursor metabolites and energy	other metabolic processes	P	"Aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_c22050	tricarboxylic acid cycle	other metabolic processes	P	"Aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)"
ruditapes_lrc12999	neural tube formation	developmental processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	cellular response to oxidative stress	stress response	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	response to drug	other biological processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	ubiquinone biosynthetic process	other metabolic processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	oxidation reduction	other metabolic processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	mitochondrial ATP synthesis coupled electron transport	other metabolic processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	determination of adult life span	developmental processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	neurogenesis	developmental processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	age-dependent response to oxidative stress	stress response	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	respiratory electron transport chain	other metabolic processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	in utero embryonic development	developmental processes	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	response to oxidative stress	stress response	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_lrc12999	mitochondrion morphogenesis	cell organization and biogenesis	P	Ubiquinone biosynthesis protein COQ7 homolog (Coenzyme Q biosynthesis protein 7 homolog) (Timing protein clk-1 homolog)
ruditapes_c15553	ribosome biogenesis	other biological processes	P	Probable rRNA-processing protein EBP2 (EBNA1-binding protein 2) (Nucleolar protein p40)
ruditapes2_c2910	amino acid transport	transport	P	Sodium-dependent proline transporter (Solute carrier family 6 member 7)
ruditapes2_c2910	proline transport	transport	P	Sodium-dependent proline transporter (Solute carrier family 6 member 7)
ruditapes2_c2910	transmembrane transport	transport	P	Sodium-dependent proline transporter (Solute carrier family 6 member 7)
ruditapes2_c2910	neurotransmitter transport	transport	P	Sodium-dependent proline transporter (Solute carrier family 6 member 7)
ruditapes2_c2910	transport	transport	P	Sodium-dependent proline transporter (Solute carrier family 6 member 7)
ruditapes2_c230	biological_process	other biological processes	P	Sperm-associated antigen 8 (HSD-1) (Sperm membrane protein 1) (SMP-1) (Sperm membrane protein BS-84)
ruditapes_c2638	biological_process	other biological processes	P	Sperm-associated antigen 8 (HSD-1) (Sperm membrane protein 1) (SMP-1) (Sperm membrane protein BS-84)
ruditapes2_c533	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes_lrc39435	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes2_c649	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes2_c1042	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes_c4751	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes_c2547	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes_c1883	response to biotic stimulus	other biological processes	P	Proline-rich transmembrane protein 1 (Dispanin subfamily D member 1) (DSPD1)
ruditapes_c13734	telomere maintenance via recombination	DNA metabolism	P	Telomerase protein component 1 (Telomerase-associated protein 1) (Telomerase protein 1) (p240) (p80 telomerase homolog)
ruditapes_c13734	telomere maintenance via recombination	cell organization and biogenesis	P	Telomerase protein component 1 (Telomerase-associated protein 1) (Telomerase protein 1) (p240) (p80 telomerase homolog)
ruditapes_c14991	limb bud formation	developmental processes	P	Semaphorin-3C (Semaphorin-E) (Sema E)
ruditapes_c14991	somitogenesis	developmental processes	P	Semaphorin-3C (Semaphorin-E) (Sema E)
ruditapes_c14991	post-embryonic development	developmental processes	P	Semaphorin-3C (Semaphorin-E) (Sema E)
ruditapes_c14991	dichotomous subdivision of terminal units involved in salivary gland branching	developmental processes	P	Semaphorin-3C (Semaphorin-E) (Sema E)
ruditapes_c14991	response to drug	other biological processes	P	Semaphorin-3C (Semaphorin-E) (Sema E)
ruditapes_c14991	immune response	other biological processes	P	Semaphorin-3C (Semaphorin-E) (Sema E)
ruditapes_c14991	heart development	developmental processes	P	Semaphorin-3C (Semaphorin-E) (Sema E)
ruditapes_c14991	neural tube development	developmental processes	P	Semaphorin-3C (Semaphorin-E) (Sema E)
ruditapes_c14991	multicellular organismal development	developmental processes	P	Semaphorin-3C (Semaphorin-E) (Sema E)
ruditapes_c14991	neural crest cell migration	developmental processes	P	Semaphorin-3C (Semaphorin-E) (Sema E)
ruditapes_c14991	blood vessel remodeling	developmental processes	P	Semaphorin-3C (Semaphorin-E) (Sema E)
ruditapes_c12577	DNA replication	DNA metabolism	P	Replication factor C subunit 4 (Activator 1 subunit 4)
ruditapes_c8300	NAD biosynthetic process	other metabolic processes	P	Nicotinamide mononucleotide adenylyltransferase 3 (NMN adenylyltransferase 3) (EC 2.7.7.1) (Nicotinate-nucleotide adenylyltransferase 1) (NaMN adenylyltransferase 1) (EC 2.7.7.18)
ruditapes_c8300	pyridine nucleotide biosynthetic process	other metabolic processes	P	Nicotinamide mononucleotide adenylyltransferase 3 (NMN adenylyltransferase 3) (EC 2.7.7.1) (Nicotinate-nucleotide adenylyltransferase 1) (NaMN adenylyltransferase 1) (EC 2.7.7.18)
ruditapes_c8300	neuroprotection	death	P	Nicotinamide mononucleotide adenylyltransferase 3 (NMN adenylyltransferase 3) (EC 2.7.7.1) (Nicotinate-nucleotide adenylyltransferase 1) (NaMN adenylyltransferase 1) (EC 2.7.7.18)
ruditapes_c8300	biosynthetic process	other metabolic processes	P	Nicotinamide mononucleotide adenylyltransferase 3 (NMN adenylyltransferase 3) (EC 2.7.7.1) (Nicotinate-nucleotide adenylyltransferase 1) (NaMN adenylyltransferase 1) (EC 2.7.7.18)
ruditapes2_c1975	extracellular matrix organization	cell organization and biogenesis	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes2_c1975	positive regulation of cell-substrate adhesion	cell adhesion	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes2_c1975	cell adhesion	cell adhesion	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes_c10834	oxidation reduction	other metabolic processes	P	"NAD-dependent malic enzyme, mitochondrial (NAD-ME) (EC 1.1.1.38) (Malic enzyme 2)"
ruditapes_c10834	malate metabolic process	other metabolic processes	P	"NAD-dependent malic enzyme, mitochondrial (NAD-ME) (EC 1.1.1.38) (Malic enzyme 2)"
ruditapes_c10834	metabolic process	other metabolic processes	P	"NAD-dependent malic enzyme, mitochondrial (NAD-ME) (EC 1.1.1.38) (Malic enzyme 2)"
ruditapes_s38831	cell junction assembly	cell organization and biogenesis	P	Vacuole membrane protein 1 (NF-E2-inducible protein 2) (Protein ni-2) (Transmembrane protein 49)
ruditapes_s38831	regulation of autophagy	other metabolic processes	P	Vacuole membrane protein 1 (NF-E2-inducible protein 2) (Protein ni-2) (Transmembrane protein 49)
ruditapes_s38831	autophagy	other metabolic processes	P	Vacuole membrane protein 1 (NF-E2-inducible protein 2) (Protein ni-2) (Transmembrane protein 49)
ruditapes_s38831	cell adhesion	cell adhesion	P	Vacuole membrane protein 1 (NF-E2-inducible protein 2) (Protein ni-2) (Transmembrane protein 49)
ruditapes_s38831	cell-cell adhesion	cell adhesion	P	Vacuole membrane protein 1 (NF-E2-inducible protein 2) (Protein ni-2) (Transmembrane protein 49)
ruditapes2_c3997	oxidation reduction	other metabolic processes	P	Dehydrogenase/reductase SDR family member 1 (EC 1.1.-.-)
ruditapes2_c3997	metabolic process	other metabolic processes	P	Dehydrogenase/reductase SDR family member 1 (EC 1.1.-.-)
ruditapes2_c3997	biological_process	other biological processes	P	Dehydrogenase/reductase SDR family member 1 (EC 1.1.-.-)
ruditapes_c9961	ribosome biogenesis	other biological processes	P	Nucleolar GTP-binding protein 2
ruditapes_c9961	biological_process	other biological processes	P	Nucleolar GTP-binding protein 2
ruditapes_c25897	negative regulation of gene expression	other metabolic processes	P	Zinc finger protein 281
ruditapes_c25897	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 281
ruditapes_c25897	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 281
ruditapes_c25897	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 281
ruditapes_c18203	biological_process	other biological processes	P	RCC1 and BTB domain-containing protein 2 (Chromosome condensation 1-like) (Regulator of chromosome condensation and BTB domain-containing protein 2)
ruditapes_c19290	carbohydrate metabolic process	other metabolic processes	P	Carbohydrate sulfotransferase 12 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 2) (Chondroitin 4-sulfotransferase 2) (C4ST-2) (C4ST2)
ruditapes_c19290	chondroitin sulfate biosynthetic process	other metabolic processes	P	Carbohydrate sulfotransferase 12 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 2) (Chondroitin 4-sulfotransferase 2) (C4ST-2) (C4ST2)
ruditapes_c19290	dermatan sulfate biosynthetic process	other metabolic processes	P	Carbohydrate sulfotransferase 12 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 2) (Chondroitin 4-sulfotransferase 2) (C4ST-2) (C4ST2)
ruditapes_c19290	carbohydrate biosynthetic process	other metabolic processes	P	Carbohydrate sulfotransferase 12 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 2) (Chondroitin 4-sulfotransferase 2) (C4ST-2) (C4ST2)
ruditapes_c10134	histone H3-K4 methylation	protein metabolism	P	Protein dpy-30 homolog (Dpy-30-like protein) (Dpy-30L)
ruditapes_c10134	histone H3-K4 methylation	cell organization and biogenesis	P	Protein dpy-30 homolog (Dpy-30-like protein) (Dpy-30L)
ruditapes_c10134	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein dpy-30 homolog (Dpy-30-like protein) (Dpy-30L)
ruditapes_c10134	endosome transport	transport	P	Protein dpy-30 homolog (Dpy-30-like protein) (Dpy-30L)
ruditapes_c10134	chromatin modification	cell organization and biogenesis	P	Protein dpy-30 homolog (Dpy-30-like protein) (Dpy-30L)
ruditapes_c10134	"transcription, DNA-dependent"	RNA metabolism	P	Protein dpy-30 homolog (Dpy-30-like protein) (Dpy-30L)
ruditapes_s33050	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit) [Cleaved into: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5, N-terminally processed]"
ruditapes_s33050	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit) [Cleaved into: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5, N-terminally processed]"
ruditapes_s37907	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit) [Cleaved into: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5, N-terminally processed]"
ruditapes_s37907	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit) [Cleaved into: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5, N-terminally processed]"
ruditapes_s37907	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit) [Cleaved into: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5, N-terminally processed]"
ruditapes_s33050	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (Complex I-15 kDa) (CI-15 kDa) (NADH-ubiquinone oxidoreductase 15 kDa subunit) [Cleaved into: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5, N-terminally processed]"
ruditapes_c5435	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_c5435	biological_process	other biological processes	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc26425	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc33514	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc26425	biological_process	other biological processes	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_s39684	biological_process	other biological processes	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc33514	biological_process	other biological processes	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_s39684	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_c3980	biological_process	other biological processes	P	Zinc finger MYND domain-containing protein 10 (Protein BLu)
ruditapes_c6669	proteolysis	protein metabolism	P	Serine protease 29 (EC 3.4.21.-) (Implantation serine proteinase 2) (ISP-2) (Strypsin-2) (Strypsin-related protein) (Tryptase-like proteinase)
ruditapes_s36153	spermatogenesis	other biological processes	P	Tudor domain-containing protein 1
ruditapes_s36153	gene silencing by RNA	other metabolic processes	P	Tudor domain-containing protein 1
ruditapes_s36153	cell differentiation	other biological processes	P	Tudor domain-containing protein 1
ruditapes_s36153	DNA methylation during gametogenesis	DNA metabolism	P	Tudor domain-containing protein 1
ruditapes_s36153	piRNA metabolic process	RNA metabolism	P	Tudor domain-containing protein 1
ruditapes_s36153	multicellular organismal development	developmental processes	P	Tudor domain-containing protein 1
ruditapes_s36153	meiosis	cell cycle and proliferation	P	Tudor domain-containing protein 1
ruditapes_s36153	germ cell development	other biological processes	P	Tudor domain-containing protein 1
ruditapes_c18624	fatty acid biosynthetic process	other metabolic processes	P	Peroxisomal trans-2-enoyl-CoA reductase (TERP) (EC 1.3.1.38)
ruditapes2_c1284	oxidation reduction	other metabolic processes	P	Peroxisomal trans-2-enoyl-CoA reductase (TERP) (EC 1.3.1.38)
ruditapes2_c1284	lipid biosynthetic process	other metabolic processes	P	Peroxisomal trans-2-enoyl-CoA reductase (TERP) (EC 1.3.1.38)
ruditapes_c18624	oxidation reduction	other metabolic processes	P	Peroxisomal trans-2-enoyl-CoA reductase (TERP) (EC 1.3.1.38)
ruditapes_c18624	lipid biosynthetic process	other metabolic processes	P	Peroxisomal trans-2-enoyl-CoA reductase (TERP) (EC 1.3.1.38)
ruditapes2_c1284	fatty acid biosynthetic process	other metabolic processes	P	Peroxisomal trans-2-enoyl-CoA reductase (TERP) (EC 1.3.1.38)
ruditapes_c9368	carbohydrate metabolic process	other metabolic processes	P	Beta-klotho (BKL) (BetaKlotho) (Klotho beta-like protein)
ruditapes_s38430	translation	protein metabolism	P	"28S ribosomal protein S18a, mitochondrial (MRP-S18-a) (Mrps18a) (S18mt-a) (28S ribosomal protein S18-3, mitochondrial) (MRP-S18-3)"
ruditapes_lrc33797	translation	protein metabolism	P	"28S ribosomal protein S18a, mitochondrial (MRP-S18-a) (Mrps18a) (S18mt-a) (28S ribosomal protein S18-3, mitochondrial) (MRP-S18-3)"
ruditapes2_c5198	translation	protein metabolism	P	"28S ribosomal protein S18a, mitochondrial (MRP-S18-a) (Mrps18a) (S18mt-a) (28S ribosomal protein S18-3, mitochondrial) (MRP-S18-3)"
ruditapes_lrc36909	translation	protein metabolism	P	"28S ribosomal protein S18a, mitochondrial (MRP-S18-a) (Mrps18a) (S18mt-a) (28S ribosomal protein S18-3, mitochondrial) (MRP-S18-3)"
ruditapes_lrc36909	biological_process	other biological processes	P	"28S ribosomal protein S18a, mitochondrial (MRP-S18-a) (Mrps18a) (S18mt-a) (28S ribosomal protein S18-3, mitochondrial) (MRP-S18-3)"
ruditapes2_c5198	biological_process	other biological processes	P	"28S ribosomal protein S18a, mitochondrial (MRP-S18-a) (Mrps18a) (S18mt-a) (28S ribosomal protein S18-3, mitochondrial) (MRP-S18-3)"
ruditapes_lrc33797	biological_process	other biological processes	P	"28S ribosomal protein S18a, mitochondrial (MRP-S18-a) (Mrps18a) (S18mt-a) (28S ribosomal protein S18-3, mitochondrial) (MRP-S18-3)"
ruditapes_s38430	biological_process	other biological processes	P	"28S ribosomal protein S18a, mitochondrial (MRP-S18-a) (Mrps18a) (S18mt-a) (28S ribosomal protein S18-3, mitochondrial) (MRP-S18-3)"
ruditapes_c10460	translation	protein metabolism	P	"28S ribosomal protein S5, mitochondrial (MRP-S5) (S5mt)"
ruditapes_c10460	biological_process	other biological processes	P	"28S ribosomal protein S5, mitochondrial (MRP-S5) (S5mt)"
ruditapes_c18632	mRNA processing	RNA metabolism	P	Splicing factor 3B subunit 1 (Pre-mRNA-splicing factor SF3b 155 kDa subunit) (SF3b155) (Spliceosome-associated protein 155) (SAP 155)
ruditapes_c18632	RNA splicing	RNA metabolism	P	Splicing factor 3B subunit 1 (Pre-mRNA-splicing factor SF3b 155 kDa subunit) (SF3b155) (Spliceosome-associated protein 155) (SAP 155)
ruditapes_c15531	retinoic acid metabolic process	other metabolic processes	P	"Beta,beta-carotene 9',10'-oxygenase (EC 1.13.11.71) (B-diox-II) (Beta-carotene dioxygenase 2)"
ruditapes_c15531	oxidation reduction	other metabolic processes	P	"Beta,beta-carotene 9',10'-oxygenase (EC 1.13.11.71) (B-diox-II) (Beta-carotene dioxygenase 2)"
ruditapes_c15531	carotene metabolic process	other metabolic processes	P	"Beta,beta-carotene 9',10'-oxygenase (EC 1.13.11.71) (B-diox-II) (Beta-carotene dioxygenase 2)"
ruditapes_c15531	retinal metabolic process	other metabolic processes	P	"Beta,beta-carotene 9',10'-oxygenase (EC 1.13.11.71) (B-diox-II) (Beta-carotene dioxygenase 2)"
ruditapes_s39166	signal transduction	signal transduction	P	Contactin-associated protein-like 4 (Cell recognition molecule Caspr4)
ruditapes_s39166	cell adhesion	cell adhesion	P	Contactin-associated protein-like 4 (Cell recognition molecule Caspr4)
ruditapes_s39166	biological_process	other biological processes	P	Contactin-associated protein-like 4 (Cell recognition molecule Caspr4)
ruditapes_c30385	biological_process	other biological processes	P	Contactin-associated protein-like 4 (Cell recognition molecule Caspr4)
ruditapes_c30385	signal transduction	signal transduction	P	Contactin-associated protein-like 4 (Cell recognition molecule Caspr4)
ruditapes_c30385	cell adhesion	cell adhesion	P	Contactin-associated protein-like 4 (Cell recognition molecule Caspr4)
ruditapes_c3282	transport	transport	P	"Fatty acid-binding protein, adipocyte (Adipocyte lipid-binding protein) (ALBP) (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes_c3282	hibernation	other biological processes	P	"Fatty acid-binding protein, adipocyte (Adipocyte lipid-binding protein) (ALBP) (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)"
ruditapes2_c394	transport	transport	P	Ras-related protein Rab-9A
ruditapes2_c394	protein transport	transport	P	Ras-related protein Rab-9A
ruditapes2_c394	positive regulation of exocytosis	transport	P	Ras-related protein Rab-9A
ruditapes2_c394	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-9A
ruditapes2_c394	bone resorption	other biological processes	P	Ras-related protein Rab-9A
ruditapes2_c394	GTP catabolic process	other metabolic processes	P	Ras-related protein Rab-9A
ruditapes_c22558	post-embryonic organ morphogenesis	developmental processes	P	Cadherin-23 (Otocadherin)
ruditapes_c22558	inner ear morphogenesis	developmental processes	P	Cadherin-23 (Otocadherin)
ruditapes_c22558	cell adhesion	cell adhesion	P	Cadherin-23 (Otocadherin)
ruditapes_c22558	locomotory behavior	other biological processes	P	Cadherin-23 (Otocadherin)
ruditapes_c22558	auditory receptor cell differentiation	developmental processes	P	Cadherin-23 (Otocadherin)
ruditapes_c22558	sensory perception of sound	other biological processes	P	Cadherin-23 (Otocadherin)
ruditapes_c22558	homophilic cell adhesion	cell adhesion	P	Cadherin-23 (Otocadherin)
ruditapes_c22558	sensory perception of light stimulus	other biological processes	P	Cadherin-23 (Otocadherin)
ruditapes_c22558	auditory receptor cell stereocilium organization	developmental processes	P	Cadherin-23 (Otocadherin)
ruditapes_c22558	auditory receptor cell stereocilium organization	cell organization and biogenesis	P	Cadherin-23 (Otocadherin)
ruditapes_c22558	inner ear development	developmental processes	P	Cadherin-23 (Otocadherin)
ruditapes_lrc13621	very-long-chain fatty acid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase ACSBG1 (EC 6.2.1.3) (Acyl-CoA synthetase bubblegum family member 1) (mBG1) (Gonadotropin-regulated long chain acyl CoA synthetase) (GR-LACS) (Lipidosin)
ruditapes_lrc13621	fatty acid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase ACSBG1 (EC 6.2.1.3) (Acyl-CoA synthetase bubblegum family member 1) (mBG1) (Gonadotropin-regulated long chain acyl CoA synthetase) (GR-LACS) (Lipidosin)
ruditapes_lrc13621	lipid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase ACSBG1 (EC 6.2.1.3) (Acyl-CoA synthetase bubblegum family member 1) (mBG1) (Gonadotropin-regulated long chain acyl CoA synthetase) (GR-LACS) (Lipidosin)
ruditapes_lrc13621	ovarian follicle atresia	developmental processes	P	Long-chain-fatty-acid--CoA ligase ACSBG1 (EC 6.2.1.3) (Acyl-CoA synthetase bubblegum family member 1) (mBG1) (Gonadotropin-regulated long chain acyl CoA synthetase) (GR-LACS) (Lipidosin)
ruditapes_lrc13621	ovarian follicle atresia	death	P	Long-chain-fatty-acid--CoA ligase ACSBG1 (EC 6.2.1.3) (Acyl-CoA synthetase bubblegum family member 1) (mBG1) (Gonadotropin-regulated long chain acyl CoA synthetase) (GR-LACS) (Lipidosin)
ruditapes_lrc13621	response to glucocorticoid stimulus	other biological processes	P	Long-chain-fatty-acid--CoA ligase ACSBG1 (EC 6.2.1.3) (Acyl-CoA synthetase bubblegum family member 1) (mBG1) (Gonadotropin-regulated long chain acyl CoA synthetase) (GR-LACS) (Lipidosin)
ruditapes_lrc13621	long-chain fatty acid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase ACSBG1 (EC 6.2.1.3) (Acyl-CoA synthetase bubblegum family member 1) (mBG1) (Gonadotropin-regulated long chain acyl CoA synthetase) (GR-LACS) (Lipidosin)
ruditapes_lrc13621	metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase ACSBG1 (EC 6.2.1.3) (Acyl-CoA synthetase bubblegum family member 1) (mBG1) (Gonadotropin-regulated long chain acyl CoA synthetase) (GR-LACS) (Lipidosin)
ruditapes_c28744	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c28744	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c28744	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c28744	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c28744	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c27895	SOS response	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c27895	DNA repair	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c27895	DNA repair	DNA metabolism	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c27895	ATP catabolic process	other metabolic processes	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c27895	response to DNA damage stimulus	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c27895	nucleotide-excision repair	stress response	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c27895	nucleotide-excision repair	DNA metabolism	P	UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
ruditapes_c14855	transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c14855	ion transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c14855	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c14855	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c14855	ATP metabolic process	other metabolic processes	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c14855	proton transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c14855	ATP hydrolysis coupled proton transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes_c14855	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit beta (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
ruditapes2_c6657	metabolic process	other metabolic processes	P	7-carboxy-7-deazaguanine synthase (CDG synthase) (EC 4.3.99.3) (Queuosine biosynthesis protein QueE)
ruditapes2_c1695	arginine biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes2_c1695	metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes2_c1695	nitrogen compound metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes2_c1695	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes2_c1695	cellular amino acid biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes2_lrc1597	signal transduction	signal transduction	P	Response regulator PleD (Stalked cell differentiation-controlling protein) [Includes: Diguanylate cyclase (DGC) (EC 2.7.7.65) (Diguanylate kinase)]
ruditapes2_lrc1597	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Response regulator PleD (Stalked cell differentiation-controlling protein) [Includes: Diguanylate cyclase (DGC) (EC 2.7.7.65) (Diguanylate kinase)]
ruditapes2_lrc1597	cell differentiation	other biological processes	P	Response regulator PleD (Stalked cell differentiation-controlling protein) [Includes: Diguanylate cyclase (DGC) (EC 2.7.7.65) (Diguanylate kinase)]
ruditapes2_lrc1597	two-component signal transduction system (phosphorelay)	signal transduction	P	Response regulator PleD (Stalked cell differentiation-controlling protein) [Includes: Diguanylate cyclase (DGC) (EC 2.7.7.65) (Diguanylate kinase)]
ruditapes2_lrc1597	cyclic nucleotide biosynthetic process	other metabolic processes	P	Response regulator PleD (Stalked cell differentiation-controlling protein) [Includes: Diguanylate cyclase (DGC) (EC 2.7.7.65) (Diguanylate kinase)]
ruditapes2_lrc1597	cell cycle	cell cycle and proliferation	P	Response regulator PleD (Stalked cell differentiation-controlling protein) [Includes: Diguanylate cyclase (DGC) (EC 2.7.7.65) (Diguanylate kinase)]
ruditapes_c19988	tyrosyl-tRNA aminoacylation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c19988	tyrosyl-tRNA aminoacylation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c19988	tRNA aminoacylation for protein translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c19988	tRNA aminoacylation for protein translation	RNA metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c19988	translation	protein metabolism	P	Tyrosine--tRNA ligase (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)
ruditapes_c16367	metabolic process	other metabolic processes	P	2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthase) (KDO-8-phosphate synthase) (KDO 8-P synthase) (KDOPS) (Phospho-2-dehydro-3-deoxyoctonate aldolase)
ruditapes_c16367	biosynthetic process	other metabolic processes	P	2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthase) (KDO-8-phosphate synthase) (KDO 8-P synthase) (KDOPS) (Phospho-2-dehydro-3-deoxyoctonate aldolase)
ruditapes_c16367	lipopolysaccharide biosynthetic process	other metabolic processes	P	2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthase) (KDO-8-phosphate synthase) (KDO 8-P synthase) (KDOPS) (Phospho-2-dehydro-3-deoxyoctonate aldolase)
ruditapes_c23681	oxidation reduction	other metabolic processes	P	Peptide methionine sulfoxide reductase MsrA 2 (Protein-methionine-S-oxide reductase 2) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase 2) (Peptide Met(O) reductase 2)
ruditapes_c23681	protein metabolic process	protein metabolism	P	Peptide methionine sulfoxide reductase MsrA 2 (Protein-methionine-S-oxide reductase 2) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase 2) (Peptide Met(O) reductase 2)
ruditapes_c30182	methylation	other metabolic processes	P	"3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) (2-polyprenyl-6-hydroxyphenyl methylase) (EC 2.1.1.222) (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase)"
ruditapes_c30182	ubiquinone biosynthetic process	other metabolic processes	P	"3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) (2-polyprenyl-6-hydroxyphenyl methylase) (EC 2.1.1.222) (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase)"
ruditapes_c12787	purine base biosynthetic process	other metabolic processes	P	Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)
ruditapes_c12787	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)
ruditapes_c5734	translational initiation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c5734	biosynthetic process	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c5734	translation	protein metabolism	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c5734	methylation	other metabolic processes	P	Methionyl-tRNA formyltransferase (EC 2.1.2.9)
ruditapes_c24697	coenzyme M biosynthetic process	other metabolic processes	P	Phosphosulfolactate synthase (EC 4.4.1.19) ((2R)-phospho-3-sulfolactate synthase) (PSL synthase)
ruditapes_c27292	polysaccharide biosynthetic process	other metabolic processes	P	Tyrosine-protein phosphatase CpsB (EC 3.1.3.48)
ruditapes_c13885	aromatic compound catabolic process	other metabolic processes	P	"Benzoyl-CoA oxygenase component B (EC 1.14.12.21) (Benzoyl-CoA 2,3-dioxygenase subunit B) (Benzoyl-CoA dioxygenase oxygenase component)"
ruditapes_c13885	oxidation reduction	other metabolic processes	P	"Benzoyl-CoA oxygenase component B (EC 1.14.12.21) (Benzoyl-CoA 2,3-dioxygenase subunit B) (Benzoyl-CoA dioxygenase oxygenase component)"
ruditapes_s34828	biotin biosynthetic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_s34828	cofactor metabolic process	other metabolic processes	P	Biotin synthase (EC 2.8.1.6)
ruditapes_c18767	carbohydrate transport	transport	P	C4-dicarboxylate transport protein 1
ruditapes_c18767	dicarboxylic acid transport	transport	P	C4-dicarboxylate transport protein 1
ruditapes_c18767	transport	transport	P	C4-dicarboxylate transport protein 1
ruditapes_c25618	metabolic process	other metabolic processes	P	Branched-chain-amino-acid aminotransferase-like protein 2
ruditapes_c20707	translation	protein metabolism	P	60S ribosomal protein L18a
ruditapes_c24027	"1,3-beta-glucan biosynthetic process"	other metabolic processes	P	"Callose synthase 1 (EC 2.4.1.34) (1,3-beta-glucan synthase) (Protein GLUCAN SYNTHASE-LIKE 6)"
ruditapes_c24027	regulation of cell shape	cell organization and biogenesis	P	"Callose synthase 1 (EC 2.4.1.34) (1,3-beta-glucan synthase) (Protein GLUCAN SYNTHASE-LIKE 6)"
ruditapes_c24027	cell wall organization	cell organization and biogenesis	P	"Callose synthase 1 (EC 2.4.1.34) (1,3-beta-glucan synthase) (Protein GLUCAN SYNTHASE-LIKE 6)"
ruditapes_c33091	defense response to fungus	stress response	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC 2.4.1.12) (OsCesA7)
ruditapes_c33091	secondary cell wall biogenesis	other biological processes	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC 2.4.1.12) (OsCesA7)
ruditapes_c33091	defense response to bacterium	stress response	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC 2.4.1.12) (OsCesA7)
ruditapes_c33091	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC 2.4.1.12) (OsCesA7)
ruditapes_c33091	cell wall organization	cell organization and biogenesis	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC 2.4.1.12) (OsCesA7)
ruditapes_lrc34075	regulation of ion transport	transport	P	Probable calcium-binding protein CML11 (Calmodulin-like protein 11)
ruditapes_lrc35271	regulation of ion transport	transport	P	Probable calcium-binding protein CML11 (Calmodulin-like protein 11)
ruditapes_c29155	chromatin modification	cell organization and biogenesis	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	"transcription, DNA-dependent"	RNA metabolism	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	DNA methylation	DNA metabolism	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	chromatin silencing	RNA metabolism	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	DNA mediated transformation	other biological processes	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	"negative regulation of gene expression, epigenetic"	other metabolic processes	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	"regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	DNA methylation on cytosine within a CNG sequence	DNA metabolism	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	methylation	other metabolic processes	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	histone H3-K9 methylation	protein metabolism	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	histone H3-K9 methylation	cell organization and biogenesis	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	zygote asymmetric cytokinesis in the embryo sac	cell cycle and proliferation	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c29155	zygote asymmetric cytokinesis in the embryo sac	developmental processes	P	DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (DNA cytosine methyltransferase MET2a) (Zea methyltransferase2) (Zmet2)
ruditapes_c11668	transport	transport	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_c11668	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_c11668	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_c11668	aerobic respiration	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_c11668	"mitochondrial electron transport, cytochrome c to oxygen"	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Fragment)
ruditapes_c17893	transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c17893	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c17893	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c17893	proton transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c17893	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c17893	ion transport	transport	P	ATP synthase subunit a (F-ATPase protein 6)
ruditapes_c16856	nitrogen compound metabolic process	other metabolic processes	P	Pantetheinase (EC 3.5.1.92) (Pantetheine hydrolase) (Vascular non-inflammatory molecule 1) (Vanin-1)
ruditapes_c7014	chromatin modification	cell organization and biogenesis	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c7014	negative regulation of cell growth	other biological processes	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c7014	negative regulation of DNA replication	DNA metabolism	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c7014	cell cycle	cell cycle and proliferation	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c7014	regulation of protein kinase activity	other metabolic processes	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c7014	nucleosome assembly	cell organization and biogenesis	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c7014	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c7014	"transcription, DNA-dependent"	RNA metabolism	P	Testis-specific Y-encoded-like protein 2 (TSPY-like protein 2) (Differentially-expressed nucleolar TGF-beta1 target protein)
ruditapes_c23345	lipid metabolic process	other metabolic processes	P	Interleukin-1 receptor antagonist protein (IL-1RN) (IL-1ra) (IRAP) (IL1 inhibitor)
ruditapes_c23345	insulin secretion	transport	P	Interleukin-1 receptor antagonist protein (IL-1RN) (IL-1ra) (IRAP) (IL1 inhibitor)
ruditapes_c23345	insulin secretion	cell-cell signaling	P	Interleukin-1 receptor antagonist protein (IL-1RN) (IL-1ra) (IRAP) (IL1 inhibitor)
ruditapes_c23345	negative regulation of cytokine-mediated signaling pathway	signal transduction	P	Interleukin-1 receptor antagonist protein (IL-1RN) (IL-1ra) (IRAP) (IL1 inhibitor)
ruditapes_c20756	DNA repair	stress response	P	Three prime repair exonuclease 1 (EC 3.1.11.2) (3'-5' exonuclease TREX1)
ruditapes_c20756	DNA repair	DNA metabolism	P	Three prime repair exonuclease 1 (EC 3.1.11.2) (3'-5' exonuclease TREX1)
ruditapes_c20756	response to DNA damage stimulus	stress response	P	Three prime repair exonuclease 1 (EC 3.1.11.2) (3'-5' exonuclease TREX1)
ruditapes_c11122	visual perception	other biological processes	P	Lecithin retinol acyltransferase (EC 2.3.1.135) (Phosphatidylcholine--retinol O-acyltransferase)
ruditapes_c11122	response to stimulus	other biological processes	P	Lecithin retinol acyltransferase (EC 2.3.1.135) (Phosphatidylcholine--retinol O-acyltransferase)
ruditapes_c16066	glycerol-3-phosphate catabolic process	other metabolic processes	P	Octopine dehydrogenase (OcDH) (EC 1.5.1.11)
ruditapes_c16066	oxidation reduction	other metabolic processes	P	Octopine dehydrogenase (OcDH) (EC 1.5.1.11)
ruditapes_lrc39162	locomotion	other biological processes	P	60S ribosomal protein L17
ruditapes_lrc39162	growth	other biological processes	P	60S ribosomal protein L17
ruditapes_lrc39162	nematode larval development	developmental processes	P	60S ribosomal protein L17
ruditapes_lrc39162	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L17
ruditapes_lrc39162	reproduction	other biological processes	P	60S ribosomal protein L17
ruditapes_lrc39162	axonal fasciculation	developmental processes	P	60S ribosomal protein L17
ruditapes_lrc39162	axonal fasciculation	cell organization and biogenesis	P	60S ribosomal protein L17
ruditapes_lrc39162	translation	protein metabolism	P	60S ribosomal protein L17
ruditapes_lrc39162	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L17
ruditapes_lrc39162	apoptosis	death	P	60S ribosomal protein L17
ruditapes_lrc34682	translation	protein metabolism	P	40S ribosomal protein S6
ruditapes_lrc36222	translation	protein metabolism	P	40S ribosomal protein S6
ruditapes_lrc37243	translation	protein metabolism	P	40S ribosomal protein S6
ruditapes2_c1043	translation	protein metabolism	P	40S ribosomal protein S6
ruditapes_lrc34670	translation	protein metabolism	P	40S ribosomal protein S6
ruditapes2_c4695	translation	protein metabolism	P	40S ribosomal protein S6
ruditapes_lrc33374	translation	protein metabolism	P	40S ribosomal protein S6
ruditapes_lrc37039	translation	protein metabolism	P	40S ribosomal protein S6
ruditapes_lrc8074	translation	protein metabolism	P	40S ribosomal protein S6
ruditapes2_c2755	pathogenesis	other biological processes	P	Conotoxin ArMKLT2-0321
ruditapes_c5433	pathogenesis	other biological processes	P	Conotoxin VnMKLT2-021 (Conotoxin VnMKLT2-0222)
ruditapes_c2610	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c9908	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c19362	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c9908	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c9908	steroid catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c2610	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c19362	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c18059	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c18059	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c18059	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c18059	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c9908	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c2610	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c19362	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c19362	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c19362	steroid catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c2610	steroid catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c2610	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c18059	steroid catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c9908	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c12319	translation	protein metabolism	P	"39S ribosomal protein L34, mitochondrial (L34mt) (MRP-L34)"
ruditapes_c10565	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor 25 (TCF-25) (Nuclear localized protein 1)
ruditapes_c10565	heart development	developmental processes	P	Transcription factor 25 (TCF-25) (Nuclear localized protein 1)
ruditapes_c10565	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor 25 (TCF-25) (Nuclear localized protein 1)
ruditapes_c10565	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Transcription factor 25 (TCF-25) (Nuclear localized protein 1)
ruditapes_c25774	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 251
ruditapes_c25774	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 251
ruditapes2_c2083	oxidation reduction	other metabolic processes	P	Redox-regulatory protein FAM213A (Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes) (Protein PAMM)
ruditapes2_c2083	regulation of osteoclast differentiation	developmental processes	P	Redox-regulatory protein FAM213A (Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes) (Protein PAMM)
ruditapes_c11850	cell redox homeostasis	other biological processes	P	Endoplasmic reticulum resident protein 44 (ER protein 44) (ERp44) (Thioredoxin domain-containing protein 4)
ruditapes_c11850	glycoprotein metabolic process	other metabolic processes	P	Endoplasmic reticulum resident protein 44 (ER protein 44) (ERp44) (Thioredoxin domain-containing protein 4)
ruditapes_c11850	response to stress	stress response	P	Endoplasmic reticulum resident protein 44 (ER protein 44) (ERp44) (Thioredoxin domain-containing protein 4)
ruditapes_c11850	response to unfolded protein	stress response	P	Endoplasmic reticulum resident protein 44 (ER protein 44) (ERp44) (Thioredoxin domain-containing protein 4)
ruditapes_c11850	protein folding	protein metabolism	P	Endoplasmic reticulum resident protein 44 (ER protein 44) (ERp44) (Thioredoxin domain-containing protein 4)
ruditapes_lrc39388	"transcription, DNA-dependent"	RNA metabolism	P	Death-inducer obliterator 1 (DIO-1) (hDido1) (Death-associated transcription factor 1) (DATF-1)
ruditapes_lrc39388	apoptosis	death	P	Death-inducer obliterator 1 (DIO-1) (hDido1) (Death-associated transcription factor 1) (DATF-1)
ruditapes_c21954	methylation	other metabolic processes	P	THUMP domain-containing protein 2
ruditapes_c9690	transport	transport	P	Alpha-tocopherol transfer protein-like
ruditapes_s35785	interspecies interaction between organisms	other biological processes	P	Nef-associated protein 1 (EC 3.1.2.-) (Thioesterase NAP1)
ruditapes_c9261	multicellular organismal development	developmental processes	P	WD repeat-containing protein 18
ruditapes_c8125	biological_process	other biological processes	P	Ashwin
ruditapes_c8125	embryonic morphogenesis	developmental processes	P	Ashwin
ruditapes2_c4177	microtubule bundle formation	cell organization and biogenesis	P	Tubulin polymerization-promoting protein family member 3 (TPPP/p20)
ruditapes2_c3354	microtubule bundle formation	cell organization and biogenesis	P	Tubulin polymerization-promoting protein family member 3 (TPPP/p20)
ruditapes2_c759	microtubule bundle formation	cell organization and biogenesis	P	Tubulin polymerization-promoting protein family member 3 (TPPP/p20)
ruditapes_lrc38820	small GTPase mediated signal transduction	signal transduction	P	Intraflagellar transport protein 27 homolog (Putative GTP-binding protein RAY-like) (Rab-like protein 4)
ruditapes2_lrc4435	small GTPase mediated signal transduction	signal transduction	P	Intraflagellar transport protein 27 homolog (Putative GTP-binding protein RAY-like) (Rab-like protein 4)
ruditapes2_c1311	small GTPase mediated signal transduction	signal transduction	P	Intraflagellar transport protein 27 homolog (Putative GTP-binding protein RAY-like) (Rab-like protein 4)
ruditapes_c20036	protein amino acid phosphorylation	protein metabolism	P	Cyclin-dependent kinase 19 (EC 2.7.11.22) (CDC2-related protein kinase 6) (Cell division cycle 2-like protein kinase 6) (Cell division protein kinase 19) (Cyclin-dependent kinase 11) (Death-preventing kinase)
ruditapes_c20036	phosphorylation	other metabolic processes	P	Cyclin-dependent kinase 19 (EC 2.7.11.22) (CDC2-related protein kinase 6) (Cell division cycle 2-like protein kinase 6) (Cell division protein kinase 19) (Cyclin-dependent kinase 11) (Death-preventing kinase)
ruditapes_c20036	cell cycle	cell cycle and proliferation	P	Cyclin-dependent kinase 19 (EC 2.7.11.22) (CDC2-related protein kinase 6) (Cell division cycle 2-like protein kinase 6) (Cell division protein kinase 19) (Cyclin-dependent kinase 11) (Death-preventing kinase)
ruditapes_c8767	metabolic process	other metabolic processes	P	Cytidine and dCMP deaminase domain-containing protein 1 (Testis development protein NYD-SP15)
ruditapes_c25371	metabolic process	other metabolic processes	P	Cytidine and dCMP deaminase domain-containing protein 1 (Testis development protein NYD-SP15)
ruditapes_c25504	glucose transport	transport	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c25504	positive regulation of glucose import	transport	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c25504	focal adhesion formation	cell adhesion	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c25504	focal adhesion formation	cell organization and biogenesis	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c25504	muscle contraction	other biological processes	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c25504	stress fiber formation	cell organization and biogenesis	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c25504	cell-matrix adhesion	cell adhesion	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c25504	positive regulation of lipid biosynthetic process	other metabolic processes	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c25504	transport	transport	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c25504	cellular response to insulin stimulus	other biological processes	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c25504	insulin receptor signaling pathway	signal transduction	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c25504	positive regulation of glycogen biosynthetic process	other metabolic processes	P	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)
ruditapes_c7893	lipid catabolic process	other metabolic processes	P	Group XIIB secretory phospholipase A2-like protein (Group XIII secretory phospholipase A2-like protein) (GXIII sPLA2-like) (sPLA2-GXIIB) (GXIIB)
ruditapes_c16600	sphinganine-1-phosphate metabolic process	other metabolic processes	P	Sphingosine-1-phosphate phosphatase 1 (SPPase1) (Spp1) (hSPP1) (hSPPase1) (EC 3.1.3.-) (Sphingosine-1-phosphatase 1)
ruditapes_c16600	sphingolipid biosynthetic process	other metabolic processes	P	Sphingosine-1-phosphate phosphatase 1 (SPPase1) (Spp1) (hSPP1) (hSPPase1) (EC 3.1.3.-) (Sphingosine-1-phosphatase 1)
ruditapes_c16600	dephosphorylation	other metabolic processes	P	Sphingosine-1-phosphate phosphatase 1 (SPPase1) (Spp1) (hSPP1) (hSPPase1) (EC 3.1.3.-) (Sphingosine-1-phosphatase 1)
ruditapes_c16600	apoptosis	death	P	Sphingosine-1-phosphate phosphatase 1 (SPPase1) (Spp1) (hSPP1) (hSPPase1) (EC 3.1.3.-) (Sphingosine-1-phosphatase 1)
ruditapes_c16600	sphingosine metabolic process	other metabolic processes	P	Sphingosine-1-phosphate phosphatase 1 (SPPase1) (Spp1) (hSPP1) (hSPPase1) (EC 3.1.3.-) (Sphingosine-1-phosphatase 1)
ruditapes_c16600	sphingolipid metabolic process	other metabolic processes	P	Sphingosine-1-phosphate phosphatase 1 (SPPase1) (Spp1) (hSPP1) (hSPPase1) (EC 3.1.3.-) (Sphingosine-1-phosphatase 1)
ruditapes_c18716	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Sal-like protein 3 (Zinc finger protein 796) (Zinc finger protein SALL3) (hSALL3)
ruditapes_c18716	"transcription, DNA-dependent"	RNA metabolism	P	Sal-like protein 3 (Zinc finger protein 796) (Zinc finger protein SALL3) (hSALL3)
ruditapes_c15080	cytokinesis	other biological processes	P	Cat eye syndrome critical region protein 2
ruditapes_c15080	apoptosis	death	P	Cat eye syndrome critical region protein 2
ruditapes_c15080	cytoskeleton organization	cell organization and biogenesis	P	Cat eye syndrome critical region protein 2
ruditapes_c15080	vesicle-mediated transport	transport	P	Cat eye syndrome critical region protein 2
ruditapes_c15080	chromatin modification	cell organization and biogenesis	P	Cat eye syndrome critical region protein 2
ruditapes_c15080	DNA fragmentation involved in apoptosis	DNA metabolism	P	Cat eye syndrome critical region protein 2
ruditapes_c15080	DNA fragmentation involved in apoptosis	cell organization and biogenesis	P	Cat eye syndrome critical region protein 2
ruditapes_c15080	DNA fragmentation involved in apoptosis	death	P	Cat eye syndrome critical region protein 2
ruditapes_c19550	protein homooligomerization	cell organization and biogenesis	P	Complement C1q tumor necrosis factor-related protein 7
ruditapes_c7870	phosphorylation	other metabolic processes	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	regulation of protein complex assembly	cell organization and biogenesis	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	peptidyl-serine phosphorylation	protein metabolism	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	cell death	death	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	mitochondrion degradation	other metabolic processes	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	protein kinase cascade	signal transduction	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	regulation of protein ubiquitination	protein metabolism	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	"positive regulation of synaptic transmission, dopaminergic"	cell-cell signaling	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	positive regulation of dopamine secretion	transport	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	autophagy	other metabolic processes	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	positive regulation of catecholamine secretion	transport	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	response to stress	stress response	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	protein amino acid phosphorylation	protein metabolism	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c7870	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	"Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)"
ruditapes_c18838	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c18838	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c18838	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c27275	melanosome organization	cell organization and biogenesis	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c27275	post-Golgi vesicle-mediated transport	transport	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c27275	interspecies interaction between organisms	other biological processes	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c27275	viral reproduction	other biological processes	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c27275	membrane organization	cell organization and biogenesis	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c27275	intracellular protein transport	transport	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c27275	regulation of defense response to virus by virus	stress response	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c27275	protein transport	transport	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c27275	transport	transport	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes_c27275	vesicle-mediated transport	transport	P	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 mu-1 subunit) (Adaptor-related protein complex 1 mu-1 subunit) (Clathrin assembly protein complex 1 medium chain 1) (Clathrin coat assembly protein AP47) (Clathrin coat-associated protein AP47) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)
ruditapes2_c2302	metabolic process	other metabolic processes	P	Cat eye syndrome critical region protein 5
ruditapes_c31298	metabolic process	other metabolic processes	P	Cat eye syndrome critical region protein 5
ruditapes_c12794	cell adhesion	cell adhesion	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes_c7138	biological_process	other biological processes	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes_c7138	cell adhesion	cell adhesion	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes_s39813	biological_process	other biological processes	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes_c12794	biological_process	other biological processes	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes2_c1154	cell adhesion	cell adhesion	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes2_c1878	cell adhesion	cell adhesion	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes2_c2438	biological_process	other biological processes	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes_lrc18312	cell adhesion	cell adhesion	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes2_c1878	biological_process	other biological processes	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes_c29538	biological_process	other biological processes	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes_lrc18312	biological_process	other biological processes	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes2_c1154	biological_process	other biological processes	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes_c29538	cell adhesion	cell adhesion	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes_s39813	cell adhesion	cell adhesion	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes2_c2438	cell adhesion	cell adhesion	P	EMILIN-2 (Elastin microfibril interface-located protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10)
ruditapes_c24113	translation	protein metabolism	P	Protein MAK16 homolog (NNP78) (Protein RBM13)
ruditapes_c23096	angiogenesis	developmental processes	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c23096	signal transduction	signal transduction	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c23096	cellular lipid metabolic process	other metabolic processes	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c23096	positive regulation of angiogenesis	developmental processes	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c23096	triglyceride homeostasis	other biological processes	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c23096	response to hypoxia	stress response	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c23096	negative regulation of apoptosis	death	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c23096	multicellular organismal development	developmental processes	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c23096	negative regulation of catalytic activity	other biological processes	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c23096	cell differentiation	other biological processes	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c23096	protein homooligomerization	cell organization and biogenesis	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c23096	negative regulation of lipoprotein lipase activity	other biological processes	P	Angiopoietin-related protein 4 (Angiopoietin-like protein 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP)
ruditapes_c4468	translation	protein metabolism	P	"39S ribosomal protein L9, mitochondrial (L9mt) (MRP-L9)"
ruditapes_c8371	cellular lipid metabolic process	other metabolic processes	P	"Helicase with zinc finger domain 2 (ATP-dependent helicase PRIC285) (Helicase with zinc finger 2, transcriptional coactivator) (PPAR-alpha-interacting complex protein 285) (PPAR-gamma DNA-binding domain-interacting protein 1) (PDIP1) (PPAR-gamma DBD-interacting protein 1) (Peroxisomal proliferator-activated receptor A-interacting complex 285 kDa protein) (EC 3.6.4.-)"
ruditapes_c8371	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Helicase with zinc finger domain 2 (ATP-dependent helicase PRIC285) (Helicase with zinc finger 2, transcriptional coactivator) (PPAR-alpha-interacting complex protein 285) (PPAR-gamma DNA-binding domain-interacting protein 1) (PDIP1) (PPAR-gamma DBD-interacting protein 1) (Peroxisomal proliferator-activated receptor A-interacting complex 285 kDa protein) (EC 3.6.4.-)"
ruditapes_c8371	"transcription, DNA-dependent"	RNA metabolism	P	"Helicase with zinc finger domain 2 (ATP-dependent helicase PRIC285) (Helicase with zinc finger 2, transcriptional coactivator) (PPAR-alpha-interacting complex protein 285) (PPAR-gamma DNA-binding domain-interacting protein 1) (PDIP1) (PPAR-gamma DBD-interacting protein 1) (Peroxisomal proliferator-activated receptor A-interacting complex 285 kDa protein) (EC 3.6.4.-)"
ruditapes_c12646	oxidation reduction	other metabolic processes	P	Sulfiredoxin-1 (EC 1.8.98.2)
ruditapes_c12646	response to oxidative stress	stress response	P	Sulfiredoxin-1 (EC 1.8.98.2)
ruditapes_c28944	"nucleobase, nucleoside and nucleotide metabolic process"	other metabolic processes	P	"Alanine--glyoxylate aminotransferase 2, mitochondrial (AGT 2) (EC 2.6.1.44) ((R)-3-amino-2-methylpropionate--pyruvate transaminase) (EC 2.6.1.40) (Beta-ALAAT II) (Beta-alanine-pyruvate aminotransferase) (D-AIBAT)"
ruditapes_c28944	pyrimidine base metabolic process	other metabolic processes	P	"Alanine--glyoxylate aminotransferase 2, mitochondrial (AGT 2) (EC 2.6.1.44) ((R)-3-amino-2-methylpropionate--pyruvate transaminase) (EC 2.6.1.40) (Beta-ALAAT II) (Beta-alanine-pyruvate aminotransferase) (D-AIBAT)"
ruditapes_c28944	pyrimidine nucleoside catabolic process	other metabolic processes	P	"Alanine--glyoxylate aminotransferase 2, mitochondrial (AGT 2) (EC 2.6.1.44) ((R)-3-amino-2-methylpropionate--pyruvate transaminase) (EC 2.6.1.40) (Beta-ALAAT II) (Beta-alanine-pyruvate aminotransferase) (D-AIBAT)"
ruditapes_c28944	glyoxylate metabolic process	other metabolic processes	P	"Alanine--glyoxylate aminotransferase 2, mitochondrial (AGT 2) (EC 2.6.1.44) ((R)-3-amino-2-methylpropionate--pyruvate transaminase) (EC 2.6.1.40) (Beta-ALAAT II) (Beta-alanine-pyruvate aminotransferase) (D-AIBAT)"
ruditapes_c28944	metabolic process	other metabolic processes	P	"Alanine--glyoxylate aminotransferase 2, mitochondrial (AGT 2) (EC 2.6.1.44) ((R)-3-amino-2-methylpropionate--pyruvate transaminase) (EC 2.6.1.40) (Beta-ALAAT II) (Beta-alanine-pyruvate aminotransferase) (D-AIBAT)"
ruditapes_c28944	cellular nitrogen compound metabolic process	other metabolic processes	P	"Alanine--glyoxylate aminotransferase 2, mitochondrial (AGT 2) (EC 2.6.1.44) ((R)-3-amino-2-methylpropionate--pyruvate transaminase) (EC 2.6.1.40) (Beta-ALAAT II) (Beta-alanine-pyruvate aminotransferase) (D-AIBAT)"
ruditapes_c9952	regulation of gene expression	other metabolic processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	histone H3-K36 methylation	protein metabolism	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	histone H3-K36 methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	morphogenesis of a branching structure	other biological processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	peptidyl-lysine trimethylation	protein metabolism	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	embryonic placenta morphogenesis	developmental processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	angiogenesis	developmental processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	stem cell development	other biological processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	vasculogenesis	developmental processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	embryonic cranial skeleton morphogenesis	developmental processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	neural tube closure	developmental processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	forebrain development	developmental processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	pericardium development	developmental processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	mesoderm morphogenesis	developmental processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	"transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	embryonic organ development	developmental processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	oxidation reduction	other metabolic processes	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c9952	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP)
ruditapes_c19940	negative regulation of type I interferon production	other biological processes	P	Interferon-induced helicase C domain-containing protein 1 (EC 3.6.4.13) (Clinically amyopathic dermatomyositis autoantigen 140 kDa) (CADM-140 autoantigen) (Helicase with 2 CARD domains) (Helicard) (Interferon-induced with helicase C domain protein 1) (Melanoma differentiation-associated protein 5) (MDA-5) (Murabutide down-regulated protein) (RIG-I-like receptor 2) (RLR-2) (RNA helicase-DEAD box protein 116)
ruditapes_c19940	response to virus	other biological processes	P	Interferon-induced helicase C domain-containing protein 1 (EC 3.6.4.13) (Clinically amyopathic dermatomyositis autoantigen 140 kDa) (CADM-140 autoantigen) (Helicase with 2 CARD domains) (Helicard) (Interferon-induced with helicase C domain protein 1) (Melanoma differentiation-associated protein 5) (MDA-5) (Murabutide down-regulated protein) (RIG-I-like receptor 2) (RLR-2) (RNA helicase-DEAD box protein 116)
ruditapes_c19940	positive regulation of interferon-beta production	other biological processes	P	Interferon-induced helicase C domain-containing protein 1 (EC 3.6.4.13) (Clinically amyopathic dermatomyositis autoantigen 140 kDa) (CADM-140 autoantigen) (Helicase with 2 CARD domains) (Helicard) (Interferon-induced with helicase C domain protein 1) (Melanoma differentiation-associated protein 5) (MDA-5) (Murabutide down-regulated protein) (RIG-I-like receptor 2) (RLR-2) (RNA helicase-DEAD box protein 116)
ruditapes_c19940	detection of virus	other biological processes	P	Interferon-induced helicase C domain-containing protein 1 (EC 3.6.4.13) (Clinically amyopathic dermatomyositis autoantigen 140 kDa) (CADM-140 autoantigen) (Helicase with 2 CARD domains) (Helicard) (Interferon-induced with helicase C domain protein 1) (Melanoma differentiation-associated protein 5) (MDA-5) (Murabutide down-regulated protein) (RIG-I-like receptor 2) (RLR-2) (RNA helicase-DEAD box protein 116)
ruditapes_c19940	interspecies interaction between organisms	other biological processes	P	Interferon-induced helicase C domain-containing protein 1 (EC 3.6.4.13) (Clinically amyopathic dermatomyositis autoantigen 140 kDa) (CADM-140 autoantigen) (Helicase with 2 CARD domains) (Helicard) (Interferon-induced with helicase C domain protein 1) (Melanoma differentiation-associated protein 5) (MDA-5) (Murabutide down-regulated protein) (RIG-I-like receptor 2) (RLR-2) (RNA helicase-DEAD box protein 116)
ruditapes_c19940	innate immune response	stress response	P	Interferon-induced helicase C domain-containing protein 1 (EC 3.6.4.13) (Clinically amyopathic dermatomyositis autoantigen 140 kDa) (CADM-140 autoantigen) (Helicase with 2 CARD domains) (Helicard) (Interferon-induced with helicase C domain protein 1) (Melanoma differentiation-associated protein 5) (MDA-5) (Murabutide down-regulated protein) (RIG-I-like receptor 2) (RLR-2) (RNA helicase-DEAD box protein 116)
ruditapes_c19940	regulation of apoptosis	death	P	Interferon-induced helicase C domain-containing protein 1 (EC 3.6.4.13) (Clinically amyopathic dermatomyositis autoantigen 140 kDa) (CADM-140 autoantigen) (Helicase with 2 CARD domains) (Helicard) (Interferon-induced with helicase C domain protein 1) (Melanoma differentiation-associated protein 5) (MDA-5) (Murabutide down-regulated protein) (RIG-I-like receptor 2) (RLR-2) (RNA helicase-DEAD box protein 116)
ruditapes_c19940	positive regulation of interferon-alpha production	other biological processes	P	Interferon-induced helicase C domain-containing protein 1 (EC 3.6.4.13) (Clinically amyopathic dermatomyositis autoantigen 140 kDa) (CADM-140 autoantigen) (Helicase with 2 CARD domains) (Helicard) (Interferon-induced with helicase C domain protein 1) (Melanoma differentiation-associated protein 5) (MDA-5) (Murabutide down-regulated protein) (RIG-I-like receptor 2) (RLR-2) (RNA helicase-DEAD box protein 116)
ruditapes_lrc35673	cell recognition	other biological processes	P	Contactin-associated protein-like 3 (Cell recognition molecule Caspr3)
ruditapes_lrc35673	cell adhesion	cell adhesion	P	Contactin-associated protein-like 3 (Cell recognition molecule Caspr3)
ruditapes_lrc35673	signal transduction	signal transduction	P	Contactin-associated protein-like 3 (Cell recognition molecule Caspr3)
ruditapes_c9370	cell recognition	other biological processes	P	Contactin-associated protein-like 3 (Cell recognition molecule Caspr3)
ruditapes_c9370	signal transduction	signal transduction	P	Contactin-associated protein-like 3 (Cell recognition molecule Caspr3)
ruditapes_c9370	cell adhesion	cell adhesion	P	Contactin-associated protein-like 3 (Cell recognition molecule Caspr3)
ruditapes_c26268	lipid metabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c18425	transport	transport	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c18425	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c18425	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c26268	transport	transport	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c26268	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c26268	response to drug	other biological processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c26268	regulation of intracellular cholesterol transport	transport	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c18425	regulation of intracellular cholesterol transport	transport	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c26268	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c26268	cholesterol homeostasis	other biological processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c18425	cholesterol homeostasis	other biological processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c18425	lipid metabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c18425	response to steroid hormone stimulus	other biological processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c26268	response to steroid hormone stimulus	other biological processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c18425	response to drug	other biological processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c18580	cell division	other biological processes	P	Kinetochore protein Nuf2 (hNuf2) (hNuf2R) (hsNuf2) (Cell division cycle-associated protein 1)
ruditapes_c18580	mitotic cell cycle	cell cycle and proliferation	P	Kinetochore protein Nuf2 (hNuf2) (hNuf2R) (hsNuf2) (Cell division cycle-associated protein 1)
ruditapes_c18580	cell cycle	cell cycle and proliferation	P	Kinetochore protein Nuf2 (hNuf2) (hNuf2R) (hsNuf2) (Cell division cycle-associated protein 1)
ruditapes_c18580	chromosome segregation	other biological processes	P	Kinetochore protein Nuf2 (hNuf2) (hNuf2R) (hsNuf2) (Cell division cycle-associated protein 1)
ruditapes_c18580	M phase of mitotic cell cycle	cell cycle and proliferation	P	Kinetochore protein Nuf2 (hNuf2) (hNuf2R) (hsNuf2) (Cell division cycle-associated protein 1)
ruditapes_c18580	mitosis	cell cycle and proliferation	P	Kinetochore protein Nuf2 (hNuf2) (hNuf2R) (hsNuf2) (Cell division cycle-associated protein 1)
ruditapes_c18580	mitosis	cell organization and biogenesis	P	Kinetochore protein Nuf2 (hNuf2) (hNuf2R) (hsNuf2) (Cell division cycle-associated protein 1)
ruditapes_c18580	mitotic prometaphase	cell cycle and proliferation	P	Kinetochore protein Nuf2 (hNuf2) (hNuf2R) (hsNuf2) (Cell division cycle-associated protein 1)
ruditapes_c18580	mitotic prometaphase	cell organization and biogenesis	P	Kinetochore protein Nuf2 (hNuf2) (hNuf2R) (hsNuf2) (Cell division cycle-associated protein 1)
ruditapes_c27211	translation	protein metabolism	P	"39S ribosomal protein L37, mitochondrial (L37mt) (MRP-L37) (39S ribosomal protein L2, mitochondrial) (L2mt) (MRP-L2)"
ruditapes_lrc29932	regulation of glucose import	transport	P	Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosomal region candidate gene 1 protein) (Alveolar soft part sarcoma locus) (Renal papillary cell carcinoma protein 17) (UBX domain-containing protein 9)
ruditapes_lrc29932	biological_process	other biological processes	P	Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosomal region candidate gene 1 protein) (Alveolar soft part sarcoma locus) (Renal papillary cell carcinoma protein 17) (UBX domain-containing protein 9)
ruditapes_lrc29932	intracellular protein transport	transport	P	Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosomal region candidate gene 1 protein) (Alveolar soft part sarcoma locus) (Renal papillary cell carcinoma protein 17) (UBX domain-containing protein 9)
ruditapes_lrc29932	glucose homeostasis	other biological processes	P	Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosomal region candidate gene 1 protein) (Alveolar soft part sarcoma locus) (Renal papillary cell carcinoma protein 17) (UBX domain-containing protein 9)
ruditapes_c24141	signal transduction	signal transduction	P	Probable G-protein coupled receptor 63 (PSP24-2) (PSP24-beta)
ruditapes_c24141	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 63 (PSP24-2) (PSP24-beta)
ruditapes_c24141	biological_process	other biological processes	P	Probable G-protein coupled receptor 63 (PSP24-2) (PSP24-beta)
ruditapes_c23072	visual perception	other biological processes	P	Interphotoreceptor matrix proteoglycan 2 (Interphotoreceptor matrix proteoglycan of 200 kDa) (IPM 200) (Sialoprotein associated with cones and rods proteoglycan) (Spacrcan)
ruditapes_c19822	biological_process	other biological processes	P	Transmembrane 6 superfamily member 2
ruditapes_c26205	negative regulation of protein kinase activity	other metabolic processes	P	cAMP-dependent protein kinase inhibitor beta (PKI-beta)
ruditapes_c18002	protein trimerization	cell organization and biogenesis	P	Tripartite motif-containing protein 4 (RING finger protein 87)
ruditapes_c25710	positive regulation of protein export from nucleus	transport	P	Exportin-4 (Exp4)
ruditapes_c25710	protein transport	transport	P	Exportin-4 (Exp4)
ruditapes_c25710	transport	transport	P	Exportin-4 (Exp4)
ruditapes_c20255	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 407
ruditapes_c20255	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 407
ruditapes_c2636	microtubule-based movement	other biological processes	P	"Dynein heavy chain 6, axonemal (Axonemal beta dynein heavy chain 6) (Ciliary dynein heavy chain 6)"
ruditapes_c21771	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 6, axonemal (Axonemal beta dynein heavy chain 6) (Ciliary dynein heavy chain 6)"
ruditapes_c21771	microtubule-based movement	other biological processes	P	"Dynein heavy chain 6, axonemal (Axonemal beta dynein heavy chain 6) (Ciliary dynein heavy chain 6)"
ruditapes_c2636	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 6, axonemal (Axonemal beta dynein heavy chain 6) (Ciliary dynein heavy chain 6)"
ruditapes_c17550	signal transduction	signal transduction	P	Rho GTPase-activating protein 39
ruditapes_c17550	regulation of small GTPase mediated signal transduction	signal transduction	P	Rho GTPase-activating protein 39
ruditapes_c17550	axon guidance	developmental processes	P	Rho GTPase-activating protein 39
ruditapes_c17550	axon guidance	cell organization and biogenesis	P	Rho GTPase-activating protein 39
ruditapes_c17550	small GTPase mediated signal transduction	signal transduction	P	Rho GTPase-activating protein 39
ruditapes_c14494	biological_process	other biological processes	P	Putative uncharacterized protein C576.19c
ruditapes_s36203	transport	transport	P	Uncharacterized transporter PB10D8.01
ruditapes_s36203	cysteine transport	transport	P	Uncharacterized transporter PB10D8.01
ruditapes_s36203	transmembrane transport	transport	P	Uncharacterized transporter PB10D8.01
ruditapes_c13497	ribosome export from nucleus	transport	P	Putative ribosomal RNA-processing protein 12
ruditapes_c13497	ribosome biogenesis	other biological processes	P	Putative ribosomal RNA-processing protein 12
ruditapes_c25127	cell adhesion	cell adhesion	P	Putative cell agglutination protein PB2C8.01
ruditapes_lrc30711	urea metabolic process	other metabolic processes	P	Putative agmatinase 3 (EC 3.5.3.11) (Agmatine ureohydrolase 3) (AUH 3)
ruditapes_c29600	transport	transport	P	Uncharacterized amino-acid permease PB24D3.02c
ruditapes_c29600	amino acid transport	transport	P	Uncharacterized amino-acid permease PB24D3.02c
ruditapes_c31775	regulation of cell shape	cell organization and biogenesis	P	Protein dopey
ruditapes_c31775	endoplasmic reticulum organization	cell organization and biogenesis	P	Protein dopey
ruditapes_c31775	protein transport	transport	P	Protein dopey
ruditapes_c31775	transport	transport	P	Protein dopey
ruditapes_c31775	Golgi to endosome transport	transport	P	Protein dopey
ruditapes2_c3227	transcription initiation from RNA polymerase III promoter	RNA metabolism	P	DNA-directed RNA polymerase III subunit rpc9 (RNA polymerase III subunit C9) (RNA polymerase III subunit C17)
ruditapes2_c3227	transcription initiation from RNA polymerase III promoter	cell organization and biogenesis	P	DNA-directed RNA polymerase III subunit rpc9 (RNA polymerase III subunit C9) (RNA polymerase III subunit C17)
ruditapes2_c3227	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase III subunit rpc9 (RNA polymerase III subunit C9) (RNA polymerase III subunit C17)
ruditapes2_c3227	cellular metabolic process	other metabolic processes	P	DNA-directed RNA polymerase III subunit rpc9 (RNA polymerase III subunit C9) (RNA polymerase III subunit C17)
ruditapes_c29098	glutamate biosynthetic process	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_lrc19812	glutamine metabolic process	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_c29098	oxidation reduction	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_lrc19812	metabolic process	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_lrc19812	nitrogen compound metabolic process	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_lrc19812	cellular amino acid biosynthetic process	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_lrc19812	oxidation reduction	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_lrc19812	glutamate biosynthetic process	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_c29098	glutamine metabolic process	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_c29098	metabolic process	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_c29098	nitrogen compound metabolic process	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_c29098	cellular amino acid biosynthetic process	other metabolic processes	P	Putative glutamate synthase [NADPH] (EC 1.4.1.13) (NADPH-GOGAT)
ruditapes_c2515	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	DNA replication	DNA metabolism	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	"transcription, DNA-dependent"	RNA metabolism	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	response to DNA damage stimulus	stress response	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	DNA repair	DNA metabolism	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	mitotic sister chromatid cohesion	cell cycle and proliferation	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	mitotic sister chromatid cohesion	cell organization and biogenesis	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	DNA-dependent DNA replication	DNA metabolism	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	regulation of S phase of mitotic cell cycle	cell cycle and proliferation	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	telomere maintenance	DNA metabolism	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	telomere maintenance	cell organization and biogenesis	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c2515	DNA repair	stress response	P	Minichromosome loss protein 1 (DNA polymerase alpha accessory factor Mcl1)
ruditapes_c18025	root development	developmental processes	P	"Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 (AtMANIb) (EC 3.2.1.113) (Alpha-mannosidase IB)"
ruditapes_c18025	N-glycan processing	protein metabolism	P	"Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 (AtMANIb) (EC 3.2.1.113) (Alpha-mannosidase IB)"
ruditapes_c11104	root hair cell tip growth	developmental processes	P	Phosphoinositide phosphatase SAC7 (AtSAC7) (EC 3.1.3.-) (Protein ROOT HAIR DEFECTIVE 4) (Protein SUPPRESSOR OF ACTIN 1C) (AtSAC1c) (Protein SUPPRESSOR OF ACTIN 7) (SAC domain protein 7) (SAC1-like protein AtSAC1c)
ruditapes_c12129	auxin mediated signaling pathway	signal transduction	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	response to heat	stress response	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	stomatal movement	other biological processes	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	response to salt stress	stress response	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	protein import into chloroplast stroma	transport	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	metabolic process	other metabolic processes	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	response to osmotic stress	stress response	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	defense response to bacterium	stress response	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	sugar mediated signaling	signal transduction	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	response to stress	stress response	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	molybdenum incorporation into molybdenum-molybdopterin complex	protein metabolism	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	response to cold	stress response	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_c12129	abscisic acid biosynthetic process	other metabolic processes	P	Molybdenum cofactor sulfurase (MOS) (MoCo sulfurase) (EC 2.8.1.9) (Abscisic acid protein 3) (Low expression of osmotically expressive genes protein 5) (Molybdenum cofactor sulfurtransferase)
ruditapes_lrc25261	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82)
ruditapes_lrc25261	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82)
ruditapes_c12693	methylation	other metabolic processes	P	Phosphoethanolamine N-methyltransferase 3 (EC 2.1.1.103)
ruditapes_c12693	metabolic process	other metabolic processes	P	Phosphoethanolamine N-methyltransferase 3 (EC 2.1.1.103)
ruditapes_c12693	phospholipid biosynthetic process	other metabolic processes	P	Phosphoethanolamine N-methyltransferase 3 (EC 2.1.1.103)
ruditapes_c24874	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Agamous-like MADS-box protein AGL86
ruditapes_c24874	"transcription, DNA-dependent"	RNA metabolism	P	Agamous-like MADS-box protein AGL86
ruditapes_c14675	protein import into nucleus	transport	P	Nuclear transport factor 2 (NTF-2)
ruditapes_c14675	protein transport	transport	P	Nuclear transport factor 2 (NTF-2)
ruditapes_c14675	nucleocytoplasmic transport	transport	P	Nuclear transport factor 2 (NTF-2)
ruditapes_c14675	transport	transport	P	Nuclear transport factor 2 (NTF-2)
ruditapes_c23084	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 4E-2 (eIF-4E-2) (eIF4E-2) (mRNA cap-binding protein)
ruditapes_c23084	translation	protein metabolism	P	Eukaryotic translation initiation factor 4E-2 (eIF-4E-2) (eIF4E-2) (mRNA cap-binding protein)
ruditapes_c15453	transport	transport	P	Probable peptide/nitrate transporter At1g72140
ruditapes_c15453	oligopeptide transport	transport	P	Probable peptide/nitrate transporter At1g72140
ruditapes_c15453	response to nematode	other biological processes	P	Probable peptide/nitrate transporter At1g72140
ruditapes_c9407	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein BEARSKIN1 (NAC domain-containing protein 15) (ANAC015)
ruditapes_c9407	root cap development	developmental processes	P	Protein BEARSKIN1 (NAC domain-containing protein 15) (ANAC015)
ruditapes_c9407	"transcription, DNA-dependent"	RNA metabolism	P	Protein BEARSKIN1 (NAC domain-containing protein 15) (ANAC015)
ruditapes_c9407	positive regulation of gene expression	other metabolic processes	P	Protein BEARSKIN1 (NAC domain-containing protein 15) (ANAC015)
ruditapes_c9407	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein BEARSKIN1 (NAC domain-containing protein 15) (ANAC015)
ruditapes_c9407	multicellular organismal development	developmental processes	P	Protein BEARSKIN1 (NAC domain-containing protein 15) (ANAC015)
ruditapes_c9407	secondary cell wall biogenesis	other biological processes	P	Protein BEARSKIN1 (NAC domain-containing protein 15) (ANAC015)
ruditapes_c15233	transmembrane transport	transport	P	ABC transporter C family member 12 (ABC transporter ABCC.12) (AtABCC12) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 13) (Glutathione S-conjugate-transporting ATPase 13) (Multidrug resistance-associated protein 13)
ruditapes_c15233	ATP catabolic process	other metabolic processes	P	ABC transporter C family member 12 (ABC transporter ABCC.12) (AtABCC12) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 13) (Glutathione S-conjugate-transporting ATPase 13) (Multidrug resistance-associated protein 13)
ruditapes_c15233	transport	transport	P	ABC transporter C family member 12 (ABC transporter ABCC.12) (AtABCC12) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 13) (Glutathione S-conjugate-transporting ATPase 13) (Multidrug resistance-associated protein 13)
ruditapes_c10948	transmembrane transport	transport	P	ABC transporter C family member 11 (ABC transporter ABCC.11) (AtABCC11) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 12) (Glutathione S-conjugate-transporting ATPase 12) (Multidrug resistance-associated protein 12)
ruditapes_c10948	transport	transport	P	ABC transporter C family member 11 (ABC transporter ABCC.11) (AtABCC11) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 12) (Glutathione S-conjugate-transporting ATPase 12) (Multidrug resistance-associated protein 12)
ruditapes_c10948	ATP catabolic process	other metabolic processes	P	ABC transporter C family member 11 (ABC transporter ABCC.11) (AtABCC11) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 12) (Glutathione S-conjugate-transporting ATPase 12) (Multidrug resistance-associated protein 12)
ruditapes_c29378	auxin mediated signaling pathway	signal transduction	P	Auxin response factor 22
ruditapes_c29378	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Auxin response factor 22
ruditapes_c29378	response to hormone stimulus	other biological processes	P	Auxin response factor 22
ruditapes_c29378	"transcription, DNA-dependent"	RNA metabolism	P	Auxin response factor 22
ruditapes_lrc37681	protein amino acid glycosylation	protein metabolism	P	"Alpha-(1,4)-fucosyltransferase (EC 2.4.1.-) (FT4-M) (FucTC) (Fucosyltransferase 13) (AtFUT13) (Galactoside 3(4)-L-fucosyltransferase)"
ruditapes_lrc37681	Lewis a epitope biosynthetic process	other metabolic processes	P	"Alpha-(1,4)-fucosyltransferase (EC 2.4.1.-) (FT4-M) (FucTC) (Fucosyltransferase 13) (AtFUT13) (Galactoside 3(4)-L-fucosyltransferase)"
ruditapes_lrc37681	cell wall organization	cell organization and biogenesis	P	"Alpha-(1,4)-fucosyltransferase (EC 2.4.1.-) (FT4-M) (FucTC) (Fucosyltransferase 13) (AtFUT13) (Galactoside 3(4)-L-fucosyltransferase)"
ruditapes_lrc39146	regulation of flower development	developmental processes	P	Probable calcium-binding protein CML23 (Calmodulin-like protein 23)
ruditapes2_c2332	biological_process	other biological processes	P	FBD-associated F-box protein At1g66310
ruditapes_c2400	"transcription, DNA-dependent"	RNA metabolism	P	Auxin-responsive protein IAA15 (Indoleacetic acid-induced protein 15)
ruditapes_c2400	auxin mediated signaling pathway	signal transduction	P	Auxin-responsive protein IAA15 (Indoleacetic acid-induced protein 15)
ruditapes_c2400	response to auxin stimulus	other biological processes	P	Auxin-responsive protein IAA15 (Indoleacetic acid-induced protein 15)
ruditapes_c2400	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Auxin-responsive protein IAA15 (Indoleacetic acid-induced protein 15)
ruditapes_lrc39098	leaf senescence	other biological processes	P	Alpha-dioxygenase 2 (Alpha DOX2) (EC 1.14.99.-) (Fatty acid dioxygenase AlphaDOX2)
ruditapes2_lrc4935	leaf senescence	other biological processes	P	Alpha-dioxygenase 2 (Alpha DOX2) (EC 1.14.99.-) (Fatty acid dioxygenase AlphaDOX2)
ruditapes2_lrc4935	fatty acid metabolic process	other metabolic processes	P	Alpha-dioxygenase 2 (Alpha DOX2) (EC 1.14.99.-) (Fatty acid dioxygenase AlphaDOX2)
ruditapes_lrc39098	fatty acid metabolic process	other metabolic processes	P	Alpha-dioxygenase 2 (Alpha DOX2) (EC 1.14.99.-) (Fatty acid dioxygenase AlphaDOX2)
ruditapes_lrc39098	long-chain fatty acid metabolic process	other metabolic processes	P	Alpha-dioxygenase 2 (Alpha DOX2) (EC 1.14.99.-) (Fatty acid dioxygenase AlphaDOX2)
ruditapes2_lrc4935	oxidation reduction	other metabolic processes	P	Alpha-dioxygenase 2 (Alpha DOX2) (EC 1.14.99.-) (Fatty acid dioxygenase AlphaDOX2)
ruditapes2_lrc4935	long-chain fatty acid metabolic process	other metabolic processes	P	Alpha-dioxygenase 2 (Alpha DOX2) (EC 1.14.99.-) (Fatty acid dioxygenase AlphaDOX2)
ruditapes2_lrc4935	response to oxidative stress	stress response	P	Alpha-dioxygenase 2 (Alpha DOX2) (EC 1.14.99.-) (Fatty acid dioxygenase AlphaDOX2)
ruditapes_lrc39098	oxidation reduction	other metabolic processes	P	Alpha-dioxygenase 2 (Alpha DOX2) (EC 1.14.99.-) (Fatty acid dioxygenase AlphaDOX2)
ruditapes_lrc39098	response to oxidative stress	stress response	P	Alpha-dioxygenase 2 (Alpha DOX2) (EC 1.14.99.-) (Fatty acid dioxygenase AlphaDOX2)
ruditapes_c16335	biological_process	other biological processes	P	Probable calcium-binding protein CML26 (Calmodulin-like protein 26)
ruditapes_c16088	methylation	other metabolic processes	P	Putative caffeoyl-CoA O-methyltransferase At1g67980 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT)
ruditapes_c16088	lignin biosynthetic process	other metabolic processes	P	Putative caffeoyl-CoA O-methyltransferase At1g67980 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT)
ruditapes_c58	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein BASIC PENTACYSTEINE3 (AtBPC3)
ruditapes_c58	"transcription, DNA-dependent"	RNA metabolism	P	Protein BASIC PENTACYSTEINE3 (AtBPC3)
ruditapes_c31820	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein BASIC PENTACYSTEINE3 (AtBPC3)
ruditapes_c31820	"transcription, DNA-dependent"	RNA metabolism	P	Protein BASIC PENTACYSTEINE3 (AtBPC3)
ruditapes_c14477	biological_process	other biological processes	P	Putative F-box/FBD/LRR-repeat protein At3g49480
ruditapes_c22887	ethylene mediated signaling pathway	signal transduction	P	Ethylene-responsive transcription factor ERF118
ruditapes_c22887	"transcription, DNA-dependent"	RNA metabolism	P	Ethylene-responsive transcription factor ERF118
ruditapes_c22887	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Ethylene-responsive transcription factor ERF118
ruditapes_c10535	carbohydrate metabolic process	other metabolic processes	P	SNF1-related protein kinase regulatory subunit gamma-1-like (AKIN subunit gamma-1-like) (CBS domain-containing protein CBSCBS2)
ruditapes_c23649	translation	protein metabolism	P	Peptide deformylase (PDF) (EC 3.5.1.88) (Polypeptide deformylase)
ruditapes_c19294	nucleotide biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c19294	methylation	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c19294	dTMP biosynthetic process	other metabolic processes	P	Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
ruditapes_c9054	lipoprotein biosynthetic process	other metabolic processes	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c9054	protein lipoylation	protein metabolism	P	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
ruditapes_c15941	polysaccharide biosynthetic process	other metabolic processes	P	Uncharacterized protein ML0110
ruditapes_c15941	transport	transport	P	Uncharacterized protein ML0110
ruditapes_c13498	ion transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c13498	ATP biosynthetic process	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c13498	proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c13498	ATP synthesis coupled proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c13498	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c13498	transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c28955	oxidation reduction	other metabolic processes	P	Dihydroorotate dehydrogenase A (fumarate) (DHOD A) (DHODase A) (DHOdehase A) (EC 1.3.98.1)
ruditapes_c28955	'de novo' pyrimidine base biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase A (fumarate) (DHOD A) (DHODase A) (DHOdehase A) (EC 1.3.98.1)
ruditapes_c28955	UMP biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase A (fumarate) (DHOD A) (DHODase A) (DHOdehase A) (EC 1.3.98.1)
ruditapes_c28955	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Dihydroorotate dehydrogenase A (fumarate) (DHOD A) (DHODase A) (DHOdehase A) (EC 1.3.98.1)
ruditapes_lrc27251	metabolic process	other metabolic processes	P	Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid kinase)
ruditapes_lrc27251	phosphorylation	other metabolic processes	P	Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid kinase)
ruditapes_lrc27251	coenzyme A biosynthetic process	other metabolic processes	P	Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid kinase)
ruditapes_c11513	DNA recombination	DNA metabolism	P	Tyrosine recombinase XerS
ruditapes_c11513	cell division	other biological processes	P	Tyrosine recombinase XerS
ruditapes_c11513	chromosome segregation	other biological processes	P	Tyrosine recombinase XerS
ruditapes_c11513	DNA integration	DNA metabolism	P	Tyrosine recombinase XerS
ruditapes_c11513	cell cycle	cell cycle and proliferation	P	Tyrosine recombinase XerS
ruditapes_c31329	translation	protein metabolism	P	Peptide chain release factor 1 (RF-1)
ruditapes_c31329	translational termination	cell organization and biogenesis	P	Peptide chain release factor 1 (RF-1)
ruditapes_c31329	translational termination	protein metabolism	P	Peptide chain release factor 1 (RF-1)
ruditapes_c23521	carbohydrate metabolic process	other metabolic processes	P	Trehalose 6-phosphate phosphorylase (TrePP) (EC 2.4.1.216)
ruditapes_c10254	carbohydrate metabolic process	other metabolic processes	P	Trehalose 6-phosphate phosphorylase (TrePP) (EC 2.4.1.216)
ruditapes_c3263	biotin biosynthetic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c3263	biosynthetic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_c3263	metabolic process	other metabolic processes	P	Putative 8-amino-7-oxononanoate synthase (AONS) (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (7-KAP synthase) (8-amino-7-ketopelargonate synthase)
ruditapes_lrc15901	peptidoglycan turnover	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes_lrc15901	phosphorylation	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes_lrc15901	carbohydrate metabolic process	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes_lrc15901	amino sugar metabolic process	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes_c25949	oxidation reduction	other metabolic processes	P	Trimethylamine-N-oxide reductase (TMAO reductase) (Trimethylamine oxidase) (EC 1.7.2.3)
ruditapes_c20906	pseudouridine synthesis	RNA metabolism	P	Ribosomal large subunit pseudouridine synthase D (EC 5.4.99.23) (23S rRNA pseudouridine(1911/1915/1917) synthase) (rRNA pseudouridylate synthase D) (rRNA-uridine isomerase D)
ruditapes_c20906	rRNA processing	RNA metabolism	P	Ribosomal large subunit pseudouridine synthase D (EC 5.4.99.23) (23S rRNA pseudouridine(1911/1915/1917) synthase) (rRNA pseudouridylate synthase D) (rRNA-uridine isomerase D)
ruditapes_c20906	RNA modification	RNA metabolism	P	Ribosomal large subunit pseudouridine synthase D (EC 5.4.99.23) (23S rRNA pseudouridine(1911/1915/1917) synthase) (rRNA pseudouridylate synthase D) (rRNA-uridine isomerase D)
ruditapes_lrc35956	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32544	transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc35956	ion transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes2_c6456	proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc35956	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32101	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32101	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc34161	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32544	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32544	proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32544	ion transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc34161	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc34161	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32101	proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc35956	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes2_c6456	ion transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc35956	transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc34161	proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32101	transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc34161	transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32544	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32544	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32101	ion transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes2_c6456	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes2_c6456	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes2_c6456	transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc35956	proton transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc34161	ion transport	transport	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_lrc32101	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes2_c6456	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit b (ATP synthase F(0) sector subunit b) (ATPase subunit I) (F-type ATPase subunit b) (F-ATPase subunit b)
ruditapes_c5653	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c5653	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c5653	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c11079	protein folding	protein metabolism	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c11079	response to stress	stress response	P	Chaperone protein HtpG (Heat shock protein HtpG) (High temperature protein G)
ruditapes_c11751	lipopolysaccharide biosynthetic process	other metabolic processes	P	Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.33) (UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase) (Undecaprenyl-Phosphate GlcNAc-1-phosphate transferase)
ruditapes_c11751	cell wall macromolecule biosynthetic process	other metabolic processes	P	Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.33) (UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase) (Undecaprenyl-Phosphate GlcNAc-1-phosphate transferase)
ruditapes_c11751	cell wall organization	cell organization and biogenesis	P	Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.33) (UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase) (Undecaprenyl-Phosphate GlcNAc-1-phosphate transferase)
ruditapes_c18601	iron-sulfur cluster assembly	other metabolic processes	P	Iron-sulfur cluster insertion protein ErpA
ruditapes_s39626	transport	transport	P	Thiol:disulfide interchange protein DsbD (EC 1.8.1.8) (Protein-disulfide reductase) (Disulfide reductase)
ruditapes_s39626	glycerol ether metabolic process	other metabolic processes	P	Thiol:disulfide interchange protein DsbD (EC 1.8.1.8) (Protein-disulfide reductase) (Disulfide reductase)
ruditapes_s39626	oxidation reduction	other metabolic processes	P	Thiol:disulfide interchange protein DsbD (EC 1.8.1.8) (Protein-disulfide reductase) (Disulfide reductase)
ruditapes_s39626	cytochrome complex assembly	cell organization and biogenesis	P	Thiol:disulfide interchange protein DsbD (EC 1.8.1.8) (Protein-disulfide reductase) (Disulfide reductase)
ruditapes_s39626	electron transport chain	other metabolic processes	P	Thiol:disulfide interchange protein DsbD (EC 1.8.1.8) (Protein-disulfide reductase) (Disulfide reductase)
ruditapes_s39626	cell redox homeostasis	other biological processes	P	Thiol:disulfide interchange protein DsbD (EC 1.8.1.8) (Protein-disulfide reductase) (Disulfide reductase)
ruditapes_c15014	carbohydrate metabolic process	other metabolic processes	P	D-ribose pyranase (EC 5.5.1.n1)
ruditapes_c15014	monosaccharide metabolic process	other metabolic processes	P	D-ribose pyranase (EC 5.5.1.n1)
ruditapes_s35375	carbohydrate transport	transport	P	Ribose import ATP-binding protein RbsA 1 (EC 3.6.3.17)
ruditapes_s35375	ATP catabolic process	other metabolic processes	P	Ribose import ATP-binding protein RbsA 1 (EC 3.6.3.17)
ruditapes_s35375	transport	transport	P	Ribose import ATP-binding protein RbsA 1 (EC 3.6.3.17)
ruditapes_c26423	lipid metabolic process	other metabolic processes	P	Gastric triacylglycerol lipase (GL) (Gastric lipase) (EC 3.1.1.3)
ruditapes_c26423	lipid catabolic process	other metabolic processes	P	Gastric triacylglycerol lipase (GL) (Gastric lipase) (EC 3.1.1.3)
ruditapes_c26423	malate metabolic process	other metabolic processes	P	Gastric triacylglycerol lipase (GL) (Gastric lipase) (EC 3.1.1.3)
ruditapes2_c864	intracellular protein transport	transport	P	Mitochondrial import receptor subunit TOM22 homolog (Translocase of outer membrane 22 kDa subunit homolog)
ruditapes2_c864	transport	transport	P	Mitochondrial import receptor subunit TOM22 homolog (Translocase of outer membrane 22 kDa subunit homolog)
ruditapes2_c864	protein transport	transport	P	Mitochondrial import receptor subunit TOM22 homolog (Translocase of outer membrane 22 kDa subunit homolog)
ruditapes2_c864	protein import into mitochondrial outer membrane	transport	P	Mitochondrial import receptor subunit TOM22 homolog (Translocase of outer membrane 22 kDa subunit homolog)
ruditapes2_c864	protein import into mitochondrial outer membrane	cell organization and biogenesis	P	Mitochondrial import receptor subunit TOM22 homolog (Translocase of outer membrane 22 kDa subunit homolog)
ruditapes2_lrc2795	proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc2795	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc2795	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc2795	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc2795	ion transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes2_lrc2795	transport	transport	P	"ATP synthase subunit g, mitochondrial (ATPase subunit g)"
ruditapes_lrc35995	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_c628	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc5329	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s38841	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s38861	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s38841	biological_process	other biological processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s38861	biological_process	other biological processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_c628	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s38841	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_c628	biological_process	other biological processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc5329	biological_process	other biological processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes2_lrc5329	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_lrc35995	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_s38861	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_lrc35995	biological_process	other biological processes	P	"NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit)"
ruditapes_c17034	leukotriene biosynthetic process	other metabolic processes	P	Microsomal glutathione S-transferase 3 (Microsomal GST-3) (EC 2.5.1.18) (Microsomal GST-III)
ruditapes_c8766	leukotriene production during acute inflammatory response	stress response	P	Microsomal glutathione S-transferase 3 (Microsomal GST-3) (EC 2.5.1.18) (Microsomal GST-III)
ruditapes_c8766	leukotriene biosynthetic process	other metabolic processes	P	Microsomal glutathione S-transferase 3 (Microsomal GST-3) (EC 2.5.1.18) (Microsomal GST-III)
ruditapes_c17034	leukotriene production during acute inflammatory response	stress response	P	Microsomal glutathione S-transferase 3 (Microsomal GST-3) (EC 2.5.1.18) (Microsomal GST-III)
ruditapes_c15587	biological_process	other biological processes	P	"39S ribosomal protein L42, mitochondrial (L42mt) (MRP-L42) (28S ribosomal protein S32, mitochondrial) (MRP-S32) (S32mt) (39S ribosomal protein L31, mitochondrial) (L31mt) (MRP-L31)"
ruditapes_c5336	biological_process	other biological processes	P	"Methionine aminopeptidase 1D, mitochondrial (EC 3.4.11.18) (Methionyl aminopeptidase type 1D, mitochondrial)"
ruditapes_c5336	cellular process	other biological processes	P	"Methionine aminopeptidase 1D, mitochondrial (EC 3.4.11.18) (Methionyl aminopeptidase type 1D, mitochondrial)"
ruditapes_c5336	proteolysis	protein metabolism	P	"Methionine aminopeptidase 1D, mitochondrial (EC 3.4.11.18) (Methionyl aminopeptidase type 1D, mitochondrial)"
ruditapes_s35073	transport	transport	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes2_lrc5490	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes_s38104	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes2_lrc4960	transport	transport	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes2_lrc5533	transport	transport	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes_s35073	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes2_lrc5490	transport	transport	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes2_lrc4960	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes2_lrc5533	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes_s38104	transport	transport	P	Cytochrome b-c1 complex subunit 10 (Complex III subunit 10) (Complex III subunit XI) (Ubiquinol-cytochrome c reductase complex 6.4 kDa protein)
ruditapes2_c2182	biological_process	other biological processes	P	COMM domain-containing protein 4
ruditapes_c15895	biological_process	other biological processes	P	Ankyrin repeat and SOCS box protein 11 (ASB-11)
ruditapes_c23654	positive regulation of MAPKKK cascade	signal transduction	P	Neudesin (Neuron-derived neurotrophic factor) (Secreted protein of unknown function) (SPUF protein)
ruditapes_c10366	biological_process	other biological processes	P	EF-hand calcium-binding domain-containing protein 2
ruditapes_c15416	biological_process	other biological processes	P	EF-hand calcium-binding domain-containing protein 2
ruditapes_c25422	biological_process	other biological processes	P	Tctex1 domain-containing protein 2
ruditapes_c18151	biological_process	other biological processes	P	Tctex1 domain-containing protein 2
ruditapes_c24964	biological_process	other biological processes	P	Tctex1 domain-containing protein 2
ruditapes2_lrc4441	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_s39679	midbrain development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc4441	hippocampus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc4441	midbrain development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_s39679	transport	transport	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc4441	hypothalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_s39679	hypothalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc4441	pyramidal neuron development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_s39679	pyramidal neuron development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_s39679	biological_process	other biological processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc4441	cerebellar Purkinje cell layer development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc4441	biological_process	other biological processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_s39679	cerebellar Purkinje cell layer development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_s39679	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_s39679	pons development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc4441	thalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc4441	pons development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_s39679	thalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc4441	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_s39679	hippocampus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_s39679	subthalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes2_lrc4441	subthalamus development	developmental processes	P	Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C)
ruditapes_c38629	biological_process	other biological processes	P	Thioredoxin domain-containing protein 9 (ATP-binding protein associated with cell differentiation)
ruditapes_s6707	cell redox homeostasis	other biological processes	P	Thioredoxin domain-containing protein 9 (ATP-binding protein associated with cell differentiation)
ruditapes_s6707	biological_process	other biological processes	P	Thioredoxin domain-containing protein 9 (ATP-binding protein associated with cell differentiation)
ruditapes_c38629	cell redox homeostasis	other biological processes	P	Thioredoxin domain-containing protein 9 (ATP-binding protein associated with cell differentiation)
ruditapes_c24239	biological_process	other biological processes	P	"28S ribosomal protein S17, mitochondrial (MRP-S17) (S17mt)"
ruditapes_c24239	translation	protein metabolism	P	"28S ribosomal protein S17, mitochondrial (MRP-S17) (S17mt)"
ruditapes_c33446	biological_process	other biological processes	P	Zinc finger HIT domain-containing protein 3 (Thyroid hormone receptor interactor 3) (Thyroid receptor-interacting protein 3) (TR-interacting protein 3) (TRIP-3)
ruditapes_c39727	biological_process	other biological processes	P	Zinc finger HIT domain-containing protein 3 (Thyroid hormone receptor interactor 3) (Thyroid receptor-interacting protein 3) (TR-interacting protein 3) (TRIP-3)
ruditapes_c33956	biological_process	other biological processes	P	Zinc finger HIT domain-containing protein 3 (Thyroid hormone receptor interactor 3) (Thyroid receptor-interacting protein 3) (TR-interacting protein 3) (TRIP-3)
ruditapes_c35600	biological_process	other biological processes	P	Zinc finger HIT domain-containing protein 3 (Thyroid hormone receptor interactor 3) (Thyroid receptor-interacting protein 3) (TR-interacting protein 3) (TRIP-3)
ruditapes2_c5045	biological_process	other biological processes	P	Zinc finger HIT domain-containing protein 3 (Thyroid hormone receptor interactor 3) (Thyroid receptor-interacting protein 3) (TR-interacting protein 3) (TRIP-3)
ruditapes_c36236	biological_process	other biological processes	P	Zinc finger HIT domain-containing protein 3 (Thyroid hormone receptor interactor 3) (Thyroid receptor-interacting protein 3) (TR-interacting protein 3) (TRIP-3)
ruditapes2_c1640	biological_process	other biological processes	P	RWD domain-containing protein 1 (DRG family-regulatory protein 2) (IH1)
ruditapes_c24209	transport	transport	P	"39S ribosomal protein L18, mitochondrial (L18mt) (MRP-L18)"
ruditapes_c19025	rRNA transport	transport	P	"39S ribosomal protein L18, mitochondrial (L18mt) (MRP-L18)"
ruditapes_c24209	rRNA transport	transport	P	"39S ribosomal protein L18, mitochondrial (L18mt) (MRP-L18)"
ruditapes_c19025	transport	transport	P	"39S ribosomal protein L18, mitochondrial (L18mt) (MRP-L18)"
ruditapes_s39428	tumor necrosis factor-mediated signaling pathway	signal transduction	P	Thioredoxin domain-containing protein 17 (14 kDa thioredoxin-related protein) (TRP14) (Protein 42-9-9) (Thioredoxin-like protein 5)
ruditapes_lrc34606	tumor necrosis factor-mediated signaling pathway	signal transduction	P	Thioredoxin domain-containing protein 17 (14 kDa thioredoxin-related protein) (TRP14) (Protein 42-9-9) (Thioredoxin-like protein 5)
ruditapes_lrc35059	tumor necrosis factor-mediated signaling pathway	signal transduction	P	Thioredoxin domain-containing protein 17 (14 kDa thioredoxin-related protein) (TRP14) (Protein 42-9-9) (Thioredoxin-like protein 5)
ruditapes_c2414	heme biosynthetic process	other metabolic processes	P	Transmembrane protein 14C
ruditapes_lrc38872	heme biosynthetic process	other metabolic processes	P	Transmembrane protein 14C
ruditapes2_c6773	biological_process	other biological processes	P	Transmembrane protein 14C
ruditapes2_c6773	heme biosynthetic process	other metabolic processes	P	Transmembrane protein 14C
ruditapes_lrc38872	biological_process	other biological processes	P	Transmembrane protein 14C
ruditapes_c2414	biological_process	other biological processes	P	Transmembrane protein 14C
ruditapes2_c3278	translational elongation	protein metabolism	P	40S ribosomal protein S21
ruditapes2_c773	translational elongation	protein metabolism	P	40S ribosomal protein S21
ruditapes2_c3278	"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	40S ribosomal protein S21
ruditapes2_c773	ribosomal small subunit biogenesis	other biological processes	P	40S ribosomal protein S21
ruditapes2_c3278	"endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	40S ribosomal protein S21
ruditapes2_c3278	translation	protein metabolism	P	40S ribosomal protein S21
ruditapes2_c3278	ribosomal small subunit biogenesis	other biological processes	P	40S ribosomal protein S21
ruditapes2_c773	"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	40S ribosomal protein S21
ruditapes2_c773	translation	protein metabolism	P	40S ribosomal protein S21
ruditapes2_c773	"endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	40S ribosomal protein S21
ruditapes_c17468	biological_process	other biological processes	P	ER membrane protein complex subunit 6 (Transmembrane protein 93)
ruditapes_c25534	blood coagulation	stress response	P	Vitamin K-dependent protein Z
ruditapes_c25534	metabolic process	other metabolic processes	P	Vitamin K-dependent protein Z
ruditapes_c2629	biological_process	other biological processes	P	"28S ribosomal protein S36, mitochondrial (MRP-S36) (S36mt)"
ruditapes_c633	biological_process	other biological processes	P	"28S ribosomal protein S36, mitochondrial (MRP-S36) (S36mt)"
ruditapes2_lrc3670	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc4483	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc35435	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc38705	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc4351	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc32884	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc4351	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc34444	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc4351	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc35993	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc3670	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc35435	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc35435	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc34444	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc32884	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc3670	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc38705	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc34444	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc35993	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc38705	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc4483	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc32884	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc4483	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes_lrc35993	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (Complex I-B12) (CI-B12) (NADH-ubiquinone oxidoreductase B12 subunit)
ruditapes2_lrc3446	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc3446	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_c2214	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_c2214	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_c2214	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_c2214	biological_process	other biological processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes_c2214	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc3887	biological_process	other biological processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc3887	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc3887	fatty acid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc3887	transport	transport	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc3887	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc3446	electron transport chain	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc3446	lipid biosynthetic process	other metabolic processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc3446	biological_process	other biological processes	P	"Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)"
ruditapes2_lrc4447	positive regulation of apoptosis	death	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc36926	response to food	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc39252	digestion	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes2_lrc4447	digestion	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes2_lrc4447	response to toxin	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc34087	response to cytokine stimulus	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc39252	response to toxin	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc36926	protein catabolic process	protein metabolism	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc34087	response to food	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc36926	digestion	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes2_lrc4447	response to nutrient	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc36926	response to peptide hormone stimulus	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc36926	positive regulation of apoptosis	death	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc39252	proteolysis	protein metabolism	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc36926	response to nutrient	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc36926	response to toxin	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc39252	response to cytokine stimulus	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes2_lrc4447	response to cytokine stimulus	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc39252	response to nutrient	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc39252	response to food	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes2_lrc4447	response to food	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc34087	proteolysis	protein metabolism	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc34087	positive regulation of apoptosis	death	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc34087	digestion	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes2_lrc4447	proteolysis	protein metabolism	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc34087	response to peptide hormone stimulus	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc39252	protein catabolic process	protein metabolism	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc34087	response to toxin	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes2_lrc4447	protein catabolic process	protein metabolism	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc39252	positive regulation of apoptosis	death	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes2_lrc4447	response to peptide hormone stimulus	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc39252	response to peptide hormone stimulus	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc36926	response to cytokine stimulus	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc34087	protein catabolic process	protein metabolism	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc34087	response to nutrient	other biological processes	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes_lrc36926	proteolysis	protein metabolism	P	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]
ruditapes2_c3202	positive regulation of cell proliferation	cell cycle and proliferation	P	Gastrokine-1 (18 kDa antrum mucosa protein) (AMP-18) (Protein CA11 homolog)
ruditapes2_c3202	positive regulation of cell division	other biological processes	P	Gastrokine-1 (18 kDa antrum mucosa protein) (AMP-18) (Protein CA11 homolog)
ruditapes_c7210	biological_process	other biological processes	P	Huntingtin-interacting protein K (Huntingtin yeast partner K)
ruditapes2_lrc6826	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc32967	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35626	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35896	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes2_lrc6853	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35870	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35896	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc34725	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes2_lrc6826	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes2_lrc3896	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_s40146	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35626	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc34725	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_s40146	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes2_lrc6826	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes2_lrc6853	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35870	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35444	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc36387	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35626	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35444	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_s40146	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35870	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35717	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc36075	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes2_lrc6853	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc32967	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc34725	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35717	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc36075	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35896	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_s37549	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc36075	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35717	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_s37549	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc36387	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc32967	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_s37549	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes2_lrc3896	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc36387	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes2_lrc3896	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_lrc35444	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (Complex I-B18) (CI-B18) (NADH-ubiquinone oxidoreductase B18 subunit)
ruditapes_c11722	biological_process	other biological processes	P	Transmembrane protein 33 (Protein DB83)
ruditapes_c7431	biological_process	other biological processes	P	Protein FAM136A
ruditapes_lrc33047	mitochondrial fusion	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc33838	inner mitochondrial membrane organization	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc32716	mitochondrial fusion	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_s36880	inner mitochondrial membrane organization	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes2_lrc5057	inner mitochondrial membrane organization	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_s36880	mitochondrial fusion	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc33047	inner mitochondrial membrane organization	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc38466	inner mitochondrial membrane organization	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc33838	mitochondrial fusion	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes2_lrc5671	mitochondrial fusion	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc38466	mitochondrial fusion	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes2_lrc5057	mitochondrial fusion	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc32716	inner mitochondrial membrane organization	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes2_lrc5671	inner mitochondrial membrane organization	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_c24387	biological_process	other biological processes	P	Leucine-rich repeat-containing protein 40
ruditapes_c25389	intracellular protein transport	transport	P	Exportin-T (Exportin(tRNA)) (tRNA exportin)
ruditapes_c25389	transport	transport	P	Exportin-T (Exportin(tRNA)) (tRNA exportin)
ruditapes_c25389	tRNA export from nucleus	transport	P	Exportin-T (Exportin(tRNA)) (tRNA exportin)
ruditapes_lrc26416	rRNA processing	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_lrc26416	rRNA catabolic process	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes2_lrc4700	biological_process	other biological processes	P	IQ and AAA domain-containing protein 1
ruditapes2_c2037	apoptosis	death	P	Probable ATP-dependent RNA helicase DDX47 (EC 3.6.4.13) (DEAD box protein 47)
ruditapes2_c2037	rRNA processing	RNA metabolism	P	Probable ATP-dependent RNA helicase DDX47 (EC 3.6.4.13) (DEAD box protein 47)
ruditapes_c15859	RNA splicing	RNA metabolism	P	Probable ATP-dependent RNA helicase DDX47 (EC 3.6.4.13) (DEAD box protein 47)
ruditapes2_c2037	RNA splicing	RNA metabolism	P	Probable ATP-dependent RNA helicase DDX47 (EC 3.6.4.13) (DEAD box protein 47)
ruditapes_c15859	rRNA processing	RNA metabolism	P	Probable ATP-dependent RNA helicase DDX47 (EC 3.6.4.13) (DEAD box protein 47)
ruditapes_c15859	apoptosis	death	P	Probable ATP-dependent RNA helicase DDX47 (EC 3.6.4.13) (DEAD box protein 47)
ruditapes_c1283	mRNA processing	RNA metabolism	P	Gem-associated protein 7 (Gemin-7)
ruditapes_c1283	RNA splicing	RNA metabolism	P	Gem-associated protein 7 (Gemin-7)
ruditapes_c6513	cell division	other biological processes	P	IST1 homolog
ruditapes_c6513	biological_process	other biological processes	P	IST1 homolog
ruditapes_c6513	cell cycle	cell cycle and proliferation	P	IST1 homolog
ruditapes2_c2393	biological_process	other biological processes	P	rRNA-processing protein UTP23 homolog
ruditapes2_c2393	rRNA processing	RNA metabolism	P	rRNA-processing protein UTP23 homolog
ruditapes2_c2393	ribosome biogenesis	other biological processes	P	rRNA-processing protein UTP23 homolog
ruditapes_c26484	biological_process	other biological processes	P	Protein FAM212A
ruditapes_c19363	biological_process	other biological processes	P	Cytochrome P450 2U1 (EC 1.14.14.1)
ruditapes_c19363	oxidation reduction	other metabolic processes	P	Cytochrome P450 2U1 (EC 1.14.14.1)
ruditapes_c16520	negative regulation of osteoclast differentiation	developmental processes	P	Leucine-rich repeat-containing protein 17
ruditapes_c16520	bone marrow development	developmental processes	P	Leucine-rich repeat-containing protein 17
ruditapes_c16520	ossification	developmental processes	P	Leucine-rich repeat-containing protein 17
ruditapes_c16520	osteoblast proliferation	cell cycle and proliferation	P	Leucine-rich repeat-containing protein 17
ruditapes_c16520	osteoblast differentiation	developmental processes	P	Leucine-rich repeat-containing protein 17
ruditapes_c21894	oxidation reduction	other metabolic processes	P	DBH-like monooxygenase protein 1 (EC 1.14.17.-) (DBH-related protein) (Monooxygenase X)
ruditapes_c21894	catecholamine metabolic process	other metabolic processes	P	DBH-like monooxygenase protein 1 (EC 1.14.17.-) (DBH-related protein) (Monooxygenase X)
ruditapes_c17759	metabolic process	other metabolic processes	P	Dehydrogenase/reductase SDR family member 7 (EC 1.1.-.-) (Retinal short-chain dehydrogenase/reductase 4) (retSDR4)
ruditapes_c17759	oxidation reduction	other metabolic processes	P	Dehydrogenase/reductase SDR family member 7 (EC 1.1.-.-) (Retinal short-chain dehydrogenase/reductase 4) (retSDR4)
ruditapes_c17759	biological_process	other biological processes	P	Dehydrogenase/reductase SDR family member 7 (EC 1.1.-.-) (Retinal short-chain dehydrogenase/reductase 4) (retSDR4)
ruditapes2_c4071	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes_c5531	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes2_c4071	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes_c5531	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) (NADH-ubiquinone oxidoreductase 18 kDa subunit)"
ruditapes_c20657	biological_process	other biological processes	P	Uncharacterized methyltransferase WBSCR22 (EC 2.1.1.-) (Williams-Beuren syndrome chromosomal region 22 protein homolog)
ruditapes_c20657	methylation	other metabolic processes	P	Uncharacterized methyltransferase WBSCR22 (EC 2.1.1.-) (Williams-Beuren syndrome chromosomal region 22 protein homolog)
ruditapes_c20657	metabolic process	other metabolic processes	P	Uncharacterized methyltransferase WBSCR22 (EC 2.1.1.-) (Williams-Beuren syndrome chromosomal region 22 protein homolog)
ruditapes_c27781	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromatin target of PRMT1 protein (Friend of PRMT1 protein) (Small arginine- and glycine-rich protein) (SRAG)
ruditapes_c27781	"transcription, DNA-dependent"	RNA metabolism	P	Chromatin target of PRMT1 protein (Friend of PRMT1 protein) (Small arginine- and glycine-rich protein) (SRAG)
ruditapes_c27781	biological_process	other biological processes	P	Chromatin target of PRMT1 protein (Friend of PRMT1 protein) (Small arginine- and glycine-rich protein) (SRAG)
ruditapes_c20168	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	m7GpppN-mRNA hydrolase (EC 3.6.1.62) (mRNA-decapping enzyme 2)
ruditapes2_c2500	biological_process	other biological processes	P	Golgi-associated plant pathogenesis-related protein 1 (GAPR-1) (Golgi-associated PR-1 protein) (Glioma pathogenesis-related protein 2) (GliPR 2)
ruditapes_c7608	biological_process	other biological processes	P	Histidine protein methyltransferase 1 homolog (Methyltransferase-like protein 18) (EC 2.1.1.-)
ruditapes_c7608	protein amino acid methylation	protein metabolism	P	Histidine protein methyltransferase 1 homolog (Methyltransferase-like protein 18) (EC 2.1.1.-)
ruditapes_c7608	methylation	other metabolic processes	P	Histidine protein methyltransferase 1 homolog (Methyltransferase-like protein 18) (EC 2.1.1.-)
ruditapes_c29991	methylation	other metabolic processes	P	THUMP domain-containing protein 2
ruditapes_c29991	biological_process	other biological processes	P	THUMP domain-containing protein 2
ruditapes2_c2251	protein transport	transport	P	Ras-related protein Rab-32
ruditapes2_c2251	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-32
ruditapes_c3800	biological_process	other biological processes	P	Heat shock 70 kDa protein 12B
ruditapes_c12223	biological_process	other biological processes	P	Heat shock 70 kDa protein 12B
ruditapes_c1110	biological_process	other biological processes	P	Heat shock 70 kDa protein 12B
ruditapes_c13817	biological_process	other biological processes	P	Heat shock 70 kDa protein 12B
ruditapes_c8628	proteolysis	protein metabolism	P	Ufm1-specific protease 1 (UfSP1) (EC 3.4.22.-)
ruditapes_c20541	maturation of 5.8S rRNA	RNA metabolism	P	Superkiller viralicidic activity 2-like 2 (EC 3.6.4.13) (ATP-dependent helicase SKIV2L2)
ruditapes_c20541	mRNA processing	RNA metabolism	P	Superkiller viralicidic activity 2-like 2 (EC 3.6.4.13) (ATP-dependent helicase SKIV2L2)
ruditapes_c20541	RNA splicing	RNA metabolism	P	Superkiller viralicidic activity 2-like 2 (EC 3.6.4.13) (ATP-dependent helicase SKIV2L2)
ruditapes_c20541	rRNA processing	RNA metabolism	P	Superkiller viralicidic activity 2-like 2 (EC 3.6.4.13) (ATP-dependent helicase SKIV2L2)
ruditapes_c15407	ribosome biogenesis	other biological processes	P	mRNA turnover protein 4 homolog
ruditapes_c15407	biological_process	other biological processes	P	mRNA turnover protein 4 homolog
ruditapes_c1824	apoptosis	death	P	"Histidine triad nucleotide-binding protein 2, mitochondrial (HINT-2) (EC 3.-.-.-) (HINT-3)"
ruditapes_s37579	biological_process	other biological processes	P	"Histidine triad nucleotide-binding protein 2, mitochondrial (HINT-2) (EC 3.-.-.-) (HINT-3)"
ruditapes_s37579	lipid biosynthetic process	other metabolic processes	P	"Histidine triad nucleotide-binding protein 2, mitochondrial (HINT-2) (EC 3.-.-.-) (HINT-3)"
ruditapes_s37579	steroid biosynthetic process	other metabolic processes	P	"Histidine triad nucleotide-binding protein 2, mitochondrial (HINT-2) (EC 3.-.-.-) (HINT-3)"
ruditapes_c1824	biological_process	other biological processes	P	"Histidine triad nucleotide-binding protein 2, mitochondrial (HINT-2) (EC 3.-.-.-) (HINT-3)"
ruditapes_c1824	lipid biosynthetic process	other metabolic processes	P	"Histidine triad nucleotide-binding protein 2, mitochondrial (HINT-2) (EC 3.-.-.-) (HINT-3)"
ruditapes_s37579	apoptosis	death	P	"Histidine triad nucleotide-binding protein 2, mitochondrial (HINT-2) (EC 3.-.-.-) (HINT-3)"
ruditapes_c1824	steroid biosynthetic process	other metabolic processes	P	"Histidine triad nucleotide-binding protein 2, mitochondrial (HINT-2) (EC 3.-.-.-) (HINT-3)"
ruditapes_c1358	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 1 (PPIase) (EC 5.2.1.8) (Rotamase PPIL1)
ruditapes_c1358	biological_process	other biological processes	P	Peptidyl-prolyl cis-trans isomerase-like 1 (PPIase) (EC 5.2.1.8) (Rotamase PPIL1)
ruditapes_c1358	RNA splicing	RNA metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 1 (PPIase) (EC 5.2.1.8) (Rotamase PPIL1)
ruditapes_c1358	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 1 (PPIase) (EC 5.2.1.8) (Rotamase PPIL1)
ruditapes_c1358	mRNA processing	RNA metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 1 (PPIase) (EC 5.2.1.8) (Rotamase PPIL1)
ruditapes_c7271	biological_process	other biological processes	P	DNL-type zinc finger protein (Hsp70-escort protein 1) (HEP1) (mtHsp70-escort protein)
ruditapes_c2200	biological_process	other biological processes	P	Zinc finger protein 706
ruditapes2_c264	biological_process	other biological processes	P	Zinc finger protein 706
ruditapes2_c2745	translation	protein metabolism	P	"39S ribosomal protein L28, mitochondrial (L28mt) (MRP-L28)"
ruditapes2_c2745	biological_process	other biological processes	P	"39S ribosomal protein L28, mitochondrial (L28mt) (MRP-L28)"
ruditapes2_c2107	biological_process	other biological processes	P	Ribosomal RNA-processing protein 7 homolog A (Gastric cancer antigen Zg14 homolog)
ruditapes_c7905	protein transport	transport	P	Transmembrane emp24 domain-containing protein 10 (21 kDa transmembrane-trafficking protein) (Transmembrane protein Tmp21) (p24 family protein delta-1) (p24delta1)
ruditapes_c7905	vesicle-mediated transport	transport	P	Transmembrane emp24 domain-containing protein 10 (21 kDa transmembrane-trafficking protein) (Transmembrane protein Tmp21) (p24 family protein delta-1) (p24delta1)
ruditapes_c7905	transport	transport	P	Transmembrane emp24 domain-containing protein 10 (21 kDa transmembrane-trafficking protein) (Transmembrane protein Tmp21) (p24 family protein delta-1) (p24delta1)
ruditapes_c7905	"retrograde vesicle-mediated transport, Golgi to ER"	transport	P	Transmembrane emp24 domain-containing protein 10 (21 kDa transmembrane-trafficking protein) (Transmembrane protein Tmp21) (p24 family protein delta-1) (p24delta1)
ruditapes_c7905	Golgi organization	cell organization and biogenesis	P	Transmembrane emp24 domain-containing protein 10 (21 kDa transmembrane-trafficking protein) (Transmembrane protein Tmp21) (p24 family protein delta-1) (p24delta1)
ruditapes_c7905	intracellular protein transport	transport	P	Transmembrane emp24 domain-containing protein 10 (21 kDa transmembrane-trafficking protein) (Transmembrane protein Tmp21) (p24 family protein delta-1) (p24delta1)
ruditapes_c7905	regulated secretory pathway	transport	P	Transmembrane emp24 domain-containing protein 10 (21 kDa transmembrane-trafficking protein) (Transmembrane protein Tmp21) (p24 family protein delta-1) (p24delta1)
ruditapes_c7905	"vesicle targeting, to, from or within Golgi"	transport	P	Transmembrane emp24 domain-containing protein 10 (21 kDa transmembrane-trafficking protein) (Transmembrane protein Tmp21) (p24 family protein delta-1) (p24delta1)
ruditapes_c20599	regulation of apoptosis	death	P	Bcl10-interacting CARD protein (BinCARD)
ruditapes_c20599	biological_process	other biological processes	P	Bcl10-interacting CARD protein (BinCARD)
ruditapes2_c2139	biological_process	other biological processes	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial"
ruditapes2_c606	negative regulation of caspase activity	death	P	Ragulator complex protein LAMTOR5 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5)
ruditapes_c5412	negative regulation of caspase activity	death	P	Ragulator complex protein LAMTOR5 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5)
ruditapes2_c606	anti-apoptosis	death	P	Ragulator complex protein LAMTOR5 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5)
ruditapes_c5412	anti-apoptosis	death	P	Ragulator complex protein LAMTOR5 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5)
ruditapes2_c3069	biological_process	other biological processes	P	Grifin (Galectin-related inter-fiber protein)
ruditapes_c14433	biological_process	other biological processes	P	Nuclear pore membrane glycoprotein 210-like (Nucleoporin 210 kDa-like) (Nucleoporin Nup210-like)
ruditapes_c25021	biological_process	other biological processes	P	Ankyrin repeat and EF-hand domain-containing protein 1 (Ankyrin repeat domain-containing protein 5)
ruditapes_c13489	biological_process	other biological processes	P	Protein FAM111A
ruditapes_c13489	metabolic process	other metabolic processes	P	Protein FAM111A
ruditapes_lrc34842	biological_process	other biological processes	P	"28S ribosomal protein S33, mitochondrial (MRP-S33) (S33mt) (Ganglioside-induced differentiation-associated-protein 3)"
ruditapes2_c3682	biological_process	other biological processes	P	"28S ribosomal protein S33, mitochondrial (MRP-S33) (S33mt) (Ganglioside-induced differentiation-associated-protein 3)"
ruditapes2_c3677	biological_process	other biological processes	P	"28S ribosomal protein S33, mitochondrial (MRP-S33) (S33mt) (Ganglioside-induced differentiation-associated-protein 3)"
ruditapes_c38504	biological_process	other biological processes	P	"28S ribosomal protein S33, mitochondrial (MRP-S33) (S33mt) (Ganglioside-induced differentiation-associated-protein 3)"
ruditapes2_lrc2988	biological_process	other biological processes	P	Ankyrin repeat domain-containing protein 39
ruditapes_c18527	biological_process	other biological processes	P	Ankyrin repeat domain-containing protein 39
ruditapes2_c272	protein amino acid phosphorylation	protein metabolism	P	Mixed lineage kinase domain-like protein
ruditapes_c30069	cell communication	other biological processes	P	Sorting nexin-29
ruditapes_c30069	biological_process	other biological processes	P	Sorting nexin-29
ruditapes_c12343	biological_process	other biological processes	P	Tetratricopeptide repeat protein 25 (TPR repeat protein 25)
ruditapes2_c696	biological_process	other biological processes	P	Transketolase-like protein 2 (EC 2.2.1.1)
ruditapes2_c696	metabolic process	other metabolic processes	P	Transketolase-like protein 2 (EC 2.2.1.1)
ruditapes_c19481	DNA replication	DNA metabolism	P	RecQ-mediated genome instability protein 1
ruditapes_c19481	biological_process	other biological processes	P	RecQ-mediated genome instability protein 1
ruditapes_c18403	meiosis	cell cycle and proliferation	P	Meiosis inhibitor protein 1 (Meiosis defective protein 1)
ruditapes_c18403	spermatid development	other biological processes	P	Meiosis inhibitor protein 1 (Meiosis defective protein 1)
ruditapes_c18403	male meiosis I	cell cycle and proliferation	P	Meiosis inhibitor protein 1 (Meiosis defective protein 1)
ruditapes_c18403	gamete generation	other biological processes	P	Meiosis inhibitor protein 1 (Meiosis defective protein 1)
ruditapes_c1818	biological_process	other biological processes	P	EF-hand calcium-binding domain-containing protein 10
ruditapes_c1818	signal transduction	signal transduction	P	EF-hand calcium-binding domain-containing protein 10
ruditapes_c29379	biological_process	other biological processes	P	Leucine-rich repeat-containing protein 48
ruditapes_c9814	biological_process	other biological processes	P	Tctex1 domain-containing protein 1
ruditapes_c19038	biological_process	other biological processes	P	WD repeat-containing protein 20
ruditapes_c12237	biological_process	other biological processes	P	Unconventional myosin-Ih
ruditapes_c16288	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 6 (PPIase) (EC 5.2.1.8) (Cyclophilin-like protein PPIL6) (Rotamase PPIL6)
ruditapes_c16288	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase-like 6 (PPIase) (EC 5.2.1.8) (Cyclophilin-like protein PPIL6) (Rotamase PPIL6)
ruditapes_c14841	one-carbon compound metabolic process	other metabolic processes	P	Carbonic anhydrase 13 (EC 4.2.1.1) (Carbonate dehydratase XIII) (Carbonic anhydrase XIII) (CA-XIII)
ruditapes_c29285	branched chain family amino acid catabolic process	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c29285	oxidation reduction	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c29285	biological_process	other biological processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c29285	metabolic process	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c6396	signal transduction	signal transduction	P	Protein shisa-5 (Scotin)
ruditapes_c6396	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Protein shisa-5 (Scotin)
ruditapes_c583	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Protein shisa-5 (Scotin)
ruditapes_c6396	induction of apoptosis	death	P	Protein shisa-5 (Scotin)
ruditapes_c583	signal transduction	signal transduction	P	Protein shisa-5 (Scotin)
ruditapes_c6396	apoptosis	death	P	Protein shisa-5 (Scotin)
ruditapes_c583	induction of apoptosis	death	P	Protein shisa-5 (Scotin)
ruditapes_c583	apoptosis	death	P	Protein shisa-5 (Scotin)
ruditapes_c20001	biological_process	other biological processes	P	CST complex subunit TEN1 (Protein telomeric pathways with STN1 homolog) (Telomere length regulation protein TEN1 homolog)
ruditapes_c19772	iron-sulfur cluster assembly	other metabolic processes	P	"Iron-sulfur cluster assembly enzyme ISCU, mitochondrial (NifU-like N-terminal domain-containing protein) (NifU-like protein)"
ruditapes_c19772	biological_process	other biological processes	P	"Iron-sulfur cluster assembly enzyme ISCU, mitochondrial (NifU-like N-terminal domain-containing protein) (NifU-like protein)"
ruditapes_c9138	polysaccharide catabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes2_c1496	polysaccharide catabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes2_c1407	metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes2_c1496	carbohydrate metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes2_c1496	chitin catabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c9138	metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c9138	chitin metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c936	carbohydrate metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c936	chitin catabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes2_c1496	chitin metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes2_c1496	metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes2_c1407	carbohydrate metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes2_c1407	chitin catabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes2_c1407	polysaccharide catabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c936	polysaccharide catabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c936	metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes2_c1407	chitin metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c9138	carbohydrate metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c936	chitin metabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c9138	chitin catabolic process	other metabolic processes	P	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)
ruditapes_c7701	negative regulation of T cell receptor signaling pathway	signal transduction	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c7701	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c7701	positive regulation of mitotic cell cycle	cell cycle and proliferation	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c7701	negative regulation of MAPKKK cascade	signal transduction	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c7701	inactivation of MAPK activity	signal transduction	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c7701	inactivation of MAPK activity	other metabolic processes	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c7701	in utero embryonic development	developmental processes	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c7701	dephosphorylation	other metabolic processes	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c7701	negative regulation of T cell activation	other biological processes	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c7701	negative regulation of JNK cascade	signal transduction	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c7701	negative regulation of JNK cascade	stress response	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c7701	protein amino acid dephosphorylation	protein metabolism	P	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (T-DSP11) (Vaccinia H1-related phosphatase) (VHR)
ruditapes_c23179	ion transport	transport	P	Calcium-activated chloride channel regulator 1 (Calcium-activated chloride channel family member 3) (mCLCA3) (Protein gob-5)
ruditapes_c23179	transport	transport	P	Calcium-activated chloride channel regulator 1 (Calcium-activated chloride channel family member 3) (mCLCA3) (Protein gob-5)
ruditapes_c23179	calcium ion transport	transport	P	Calcium-activated chloride channel regulator 1 (Calcium-activated chloride channel family member 3) (mCLCA3) (Protein gob-5)
ruditapes_c20484	oxidation reduction	other metabolic processes	P	Cytochrome P450 2C55 (EC 1.14.14.1) (CYPIIC55)
ruditapes2_c2779	L-lysine catabolic process to acetyl-CoA via L-pipecolate	other metabolic processes	P	Peroxisomal sarcosine oxidase (PSO) (EC 1.5.3.1) (EC 1.5.3.7) (L-pipecolate oxidase) (L-pipecolic acid oxidase)
ruditapes2_c2779	tetrahydrofolate metabolic process	other metabolic processes	P	Peroxisomal sarcosine oxidase (PSO) (EC 1.5.3.1) (EC 1.5.3.7) (L-pipecolate oxidase) (L-pipecolic acid oxidase)
ruditapes2_c2779	oxidation reduction	other metabolic processes	P	Peroxisomal sarcosine oxidase (PSO) (EC 1.5.3.1) (EC 1.5.3.7) (L-pipecolate oxidase) (L-pipecolic acid oxidase)
ruditapes2_c2729	biological_process	other biological processes	P	Protein FAM210B
ruditapes2_c2192	angiogenesis	developmental processes	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	establishment of cell polarity	cell organization and biogenesis	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	transmission of nerve impulse	other biological processes	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	leukocyte migration during inflammatory response	stress response	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	spermatid development	other biological processes	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	cell-matrix adhesion	cell adhesion	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	neutrophil homeostasis	other biological processes	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	adaptive immune response	other biological processes	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	myeloid progenitor cell differentiation	developmental processes	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	cell adhesion	cell adhesion	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	spermatogenesis	other biological processes	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	myelination	developmental processes	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes2_c2192	cell migration	other biological processes	P	Junctional adhesion molecule C (JAM-C) (JAM-2) (Junctional adhesion molecule 3) (JAM-3)
ruditapes_c8003	biological_process	other biological processes	P	BolA-like protein 1
ruditapes_c11270	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Activating signal cointegrator 1 complex subunit 1 (ASC-1 complex subunit p50) (Trip4 complex subunit p50)
ruditapes_c10983	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Activating signal cointegrator 1 complex subunit 1 (ASC-1 complex subunit p50) (Trip4 complex subunit p50)
ruditapes_c10983	"transcription, DNA-dependent"	RNA metabolism	P	Activating signal cointegrator 1 complex subunit 1 (ASC-1 complex subunit p50) (Trip4 complex subunit p50)
ruditapes_c11270	"transcription, DNA-dependent"	RNA metabolism	P	Activating signal cointegrator 1 complex subunit 1 (ASC-1 complex subunit p50) (Trip4 complex subunit p50)
ruditapes_c16926	biological_process	other biological processes	P	Leucine-rich repeat-containing protein C10orf11 homolog
ruditapes_c23872	biological_process	other biological processes	P	Uncharacterized protein C1orf189 homolog
ruditapes2_c726	proteolysis	protein metabolism	P	Serine protease 52 (EC 3.4.21.-) (Testicular-specific serine protease 3)
ruditapes2_c726	biological_process	other biological processes	P	Serine protease 52 (EC 3.4.21.-) (Testicular-specific serine protease 3)
ruditapes_c5827	biological_process	other biological processes	P	Spermatogenesis-associated protein 3 (Testis and spermatogenesis cell-related protein 1) (mTSARG1) (Testis spermatocyte apoptosis-related protein 1)
ruditapes2_lrc2136	proteolysis	protein metabolism	P	Probable inactive serine protease 37 (Probable inactive trypsin-X2)
ruditapes2_lrc2136	biological_process	other biological processes	P	Probable inactive serine protease 37 (Probable inactive trypsin-X2)
ruditapes_c439	biological_process	other biological processes	P	Uncharacterized protein C1orf194 homolog
ruditapes2_c324	transport	transport	P	"Dynein light chain roadblock-type 2 (Dynein light chain 2B, cytoplasmic)"
ruditapes2_c324	biological_process	other biological processes	P	"Dynein light chain roadblock-type 2 (Dynein light chain 2B, cytoplasmic)"
ruditapes2_lrc5866	biological_process	other biological processes	P	EF-hand calcium-binding domain-containing protein 9
ruditapes_lrc32530	biological_process	other biological processes	P	EF-hand calcium-binding domain-containing protein 9
ruditapes_lrc35718	biological_process	other biological processes	P	EF-hand calcium-binding domain-containing protein 9
ruditapes2_lrc5899	biological_process	other biological processes	P	EF-hand calcium-binding domain-containing protein 9
ruditapes_lrc33911	biological_process	other biological processes	P	EF-hand calcium-binding domain-containing protein 9
ruditapes_c30256	biological_process	other biological processes	P	Uncharacterized protein C17orf98 homolog
ruditapes_c29851	biological_process	other biological processes	P	UPF0573 protein C2orf70 homolog
ruditapes_c26461	RNA splicing	RNA metabolism	P	U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60 kDa protein) (WD splicing factor Prp4)
ruditapes_c26461	mRNA processing	RNA metabolism	P	U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60 kDa protein) (WD splicing factor Prp4)
ruditapes_c13075	protein amino acid phosphorylation	protein metabolism	P	General transcription factor IIH subunit 1 (Basic transcription factor 2 62 kDa subunit) (BTF2 p62) (General transcription factor IIH polypeptide 1) (TFIIH basal transcription factor complex p62 subunit)
ruditapes_c13075	response to DNA damage stimulus	stress response	P	General transcription factor IIH subunit 1 (Basic transcription factor 2 62 kDa subunit) (BTF2 p62) (General transcription factor IIH polypeptide 1) (TFIIH basal transcription factor complex p62 subunit)
ruditapes_c13075	transcription from RNA polymerase II promoter	RNA metabolism	P	General transcription factor IIH subunit 1 (Basic transcription factor 2 62 kDa subunit) (BTF2 p62) (General transcription factor IIH polypeptide 1) (TFIIH basal transcription factor complex p62 subunit)
ruditapes_c13075	DNA repair	stress response	P	General transcription factor IIH subunit 1 (Basic transcription factor 2 62 kDa subunit) (BTF2 p62) (General transcription factor IIH polypeptide 1) (TFIIH basal transcription factor complex p62 subunit)
ruditapes_c13075	DNA repair	DNA metabolism	P	General transcription factor IIH subunit 1 (Basic transcription factor 2 62 kDa subunit) (BTF2 p62) (General transcription factor IIH polypeptide 1) (TFIIH basal transcription factor complex p62 subunit)
ruditapes_c13075	"regulation of transcription, DNA-dependent"	RNA metabolism	P	General transcription factor IIH subunit 1 (Basic transcription factor 2 62 kDa subunit) (BTF2 p62) (General transcription factor IIH polypeptide 1) (TFIIH basal transcription factor complex p62 subunit)
ruditapes_c13075	"transcription, DNA-dependent"	RNA metabolism	P	General transcription factor IIH subunit 1 (Basic transcription factor 2 62 kDa subunit) (BTF2 p62) (General transcription factor IIH polypeptide 1) (TFIIH basal transcription factor complex p62 subunit)
ruditapes_c31461	biological_process	other biological processes	P	Carboxypeptidase N subunit 2 (Carboxypeptidase N 83 kDa chain) (Carboxypeptidase N large subunit) (Carboxypeptidase N polypeptide 2) (Carboxypeptidase N regulatory subunit)
ruditapes_lrc37813	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase MARCH8 (EC 6.3.2.-) (Cellular modulator of immune recognition) (c-MIR) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII)
ruditapes_lrc38547	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase MARCH8 (EC 6.3.2.-) (Cellular modulator of immune recognition) (c-MIR) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII)
ruditapes_lrc37813	protein polyubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase MARCH8 (EC 6.3.2.-) (Cellular modulator of immune recognition) (c-MIR) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII)
ruditapes_lrc38547	antigen processing and presentation of peptide antigen via MHC class II	other biological processes	P	E3 ubiquitin-protein ligase MARCH8 (EC 6.3.2.-) (Cellular modulator of immune recognition) (c-MIR) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII)
ruditapes_lrc38547	protein polyubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase MARCH8 (EC 6.3.2.-) (Cellular modulator of immune recognition) (c-MIR) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII)
ruditapes_lrc37813	negative regulation of MHC class II biosynthetic process	other metabolic processes	P	E3 ubiquitin-protein ligase MARCH8 (EC 6.3.2.-) (Cellular modulator of immune recognition) (c-MIR) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII)
ruditapes_lrc37813	antigen processing and presentation of peptide antigen via MHC class II	other biological processes	P	E3 ubiquitin-protein ligase MARCH8 (EC 6.3.2.-) (Cellular modulator of immune recognition) (c-MIR) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII)
ruditapes_lrc38547	negative regulation of MHC class II biosynthetic process	other metabolic processes	P	E3 ubiquitin-protein ligase MARCH8 (EC 6.3.2.-) (Cellular modulator of immune recognition) (c-MIR) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII)
ruditapes_c7015	cholesterol metabolic process	other metabolic processes	P	"Sterol 26-hydroxylase, mitochondrial (EC 1.14.13.15) (5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol 27-hydroxylase) (Cytochrome P-450C27/25) (Cytochrome P450 27) (Sterol 27-hydroxylase) (Vitamin D(3) 25-hydroxylase)"
ruditapes_c7015	oxidation reduction	other metabolic processes	P	"Sterol 26-hydroxylase, mitochondrial (EC 1.14.13.15) (5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol 27-hydroxylase) (Cytochrome P-450C27/25) (Cytochrome P450 27) (Sterol 27-hydroxylase) (Vitamin D(3) 25-hydroxylase)"
ruditapes_lrc36091	proteolysis	protein metabolism	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes_c2083	proteolysis	protein metabolism	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes2_lrc7224	proteolysis	protein metabolism	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes_lrc36091	fibrinolysis	stress response	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes2_lrc7224	fibrinolysis	stress response	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes2_c3927	fibrinolysis	stress response	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes2_c3927	proteolysis	protein metabolism	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes_c2083	fibrinolysis	stress response	P	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)
ruditapes_c29649	retina homeostasis	other biological processes	P	Bardet-Biedl syndrome 10 protein homolog
ruditapes_c29649	cellular protein metabolic process	protein metabolism	P	Bardet-Biedl syndrome 10 protein homolog
ruditapes_c29649	sensory cilium assembly	cell organization and biogenesis	P	Bardet-Biedl syndrome 10 protein homolog
ruditapes_c29649	photoreceptor cell maintenance	other biological processes	P	Bardet-Biedl syndrome 10 protein homolog
ruditapes2_c659	response to retinoic acid	other biological processes	P	Ganglioside-induced differentiation-associated protein 2
ruditapes2_c2546	biological_process	other biological processes	P	Armadillo repeat-containing protein 8
ruditapes_c10293	biological_process	other biological processes	P	Sushi domain-containing protein 2
ruditapes_c10293	immune response	other biological processes	P	Sushi domain-containing protein 2
ruditapes_c28075	anti-apoptosis	death	P	E3 ubiquitin-protein ligase synoviolin (EC 6.3.2.-) (Synovial apoptosis inhibitor 1)
ruditapes_c28075	multicellular organismal development	developmental processes	P	E3 ubiquitin-protein ligase synoviolin (EC 6.3.2.-) (Synovial apoptosis inhibitor 1)
ruditapes_c28075	in utero embryonic development	developmental processes	P	E3 ubiquitin-protein ligase synoviolin (EC 6.3.2.-) (Synovial apoptosis inhibitor 1)
ruditapes_c6973	biological_process	other biological processes	P	Copine-8 (Copine VIII)
ruditapes_c2476	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Complex I-39kD) (CI-39kD) (NADH-ubiquinone oxidoreductase 39 kDa subunit)"
ruditapes_c2476	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Complex I-39kD) (CI-39kD) (NADH-ubiquinone oxidoreductase 39 kDa subunit)"
ruditapes_c1466	transport	transport	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Complex I-39kD) (CI-39kD) (NADH-ubiquinone oxidoreductase 39 kDa subunit)"
ruditapes_c1466	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Complex I-39kD) (CI-39kD) (NADH-ubiquinone oxidoreductase 39 kDa subunit)"
ruditapes2_c1764	translation	protein metabolism	P	"28S ribosomal protein S15, mitochondrial (MRP-S15) (S15mt)"
ruditapes2_c1764	biological_process	other biological processes	P	"28S ribosomal protein S15, mitochondrial (MRP-S15) (S15mt)"
ruditapes_c3521	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (Complex I-19kD) (CI-19kD) (Complex I-PGIV) (CI-PGIV) (NADH-ubiquinone oxidoreductase 19 kDa subunit)
ruditapes_c3521	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (Complex I-19kD) (CI-19kD) (Complex I-PGIV) (CI-PGIV) (NADH-ubiquinone oxidoreductase 19 kDa subunit)
ruditapes_c3521	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (Complex I-19kD) (CI-19kD) (Complex I-PGIV) (CI-PGIV) (NADH-ubiquinone oxidoreductase 19 kDa subunit)
ruditapes_c10304	protein transport	transport	P	AP-3 complex subunit sigma-1 (AP-3 complex subunit sigma-3A) (Adapter-related protein complex 3 sigma-1 subunit) (Sigma-3A-adaptin) (Sigma3A-adaptin) (Sigma-adaptin 3a)
ruditapes_c10304	transport	transport	P	AP-3 complex subunit sigma-1 (AP-3 complex subunit sigma-3A) (Adapter-related protein complex 3 sigma-1 subunit) (Sigma-3A-adaptin) (Sigma3A-adaptin) (Sigma-adaptin 3a)
ruditapes_c10304	vesicle-mediated transport	transport	P	AP-3 complex subunit sigma-1 (AP-3 complex subunit sigma-3A) (Adapter-related protein complex 3 sigma-1 subunit) (Sigma-3A-adaptin) (Sigma3A-adaptin) (Sigma-adaptin 3a)
ruditapes_c10304	intracellular protein transport	transport	P	AP-3 complex subunit sigma-1 (AP-3 complex subunit sigma-3A) (Adapter-related protein complex 3 sigma-1 subunit) (Sigma-3A-adaptin) (Sigma3A-adaptin) (Sigma-adaptin 3a)
ruditapes2_c464	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-30kD) (CI-30kD) (NADH-ubiquinone oxidoreductase 30 kDa subunit)"
ruditapes2_c464	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-30kD) (CI-30kD) (NADH-ubiquinone oxidoreductase 30 kDa subunit)"
ruditapes2_c464	negative regulation of cell growth	other biological processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-30kD) (CI-30kD) (NADH-ubiquinone oxidoreductase 30 kDa subunit)"
ruditapes2_c229	oxidation reduction	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-30kD) (CI-30kD) (NADH-ubiquinone oxidoreductase 30 kDa subunit)"
ruditapes2_c229	induction of apoptosis	death	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-30kD) (CI-30kD) (NADH-ubiquinone oxidoreductase 30 kDa subunit)"
ruditapes2_c229	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-30kD) (CI-30kD) (NADH-ubiquinone oxidoreductase 30 kDa subunit)"
ruditapes2_c464	induction of apoptosis	death	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-30kD) (CI-30kD) (NADH-ubiquinone oxidoreductase 30 kDa subunit)"
ruditapes2_c229	negative regulation of cell growth	other biological processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-30kD) (CI-30kD) (NADH-ubiquinone oxidoreductase 30 kDa subunit)"
ruditapes2_c464	electron transport chain	other metabolic processes	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-30kD) (CI-30kD) (NADH-ubiquinone oxidoreductase 30 kDa subunit)"
ruditapes2_c229	transport	transport	P	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-30kD) (CI-30kD) (NADH-ubiquinone oxidoreductase 30 kDa subunit)"
ruditapes_c25946	glyoxylate catabolic process	other metabolic processes	P	"Probable 4-hydroxy-2-oxoglutarate aldolase, mitochondrial (EC 4.1.3.16) (Dihydrodipicolinate synthase-like) (DHDPS-like protein) (Probable 2-keto-4-hydroxyglutarate aldolase) (Probable KHG-aldolase)"
ruditapes_c25946	metabolic process	other metabolic processes	P	"Probable 4-hydroxy-2-oxoglutarate aldolase, mitochondrial (EC 4.1.3.16) (Dihydrodipicolinate synthase-like) (DHDPS-like protein) (Probable 2-keto-4-hydroxyglutarate aldolase) (Probable KHG-aldolase)"
ruditapes_c28845	response to cold	stress response	P	GMP reductase 1 (EC 1.7.1.7) (Guanosine 5'-monophosphate oxidoreductase 1) (Guanosine monophosphate reductase 1)
ruditapes_c28845	biological_process	other biological processes	P	GMP reductase 1 (EC 1.7.1.7) (Guanosine 5'-monophosphate oxidoreductase 1) (Guanosine monophosphate reductase 1)
ruditapes_c28845	nucleotide metabolic process	other metabolic processes	P	GMP reductase 1 (EC 1.7.1.7) (Guanosine 5'-monophosphate oxidoreductase 1) (Guanosine monophosphate reductase 1)
ruditapes_c28845	oxidation reduction	other metabolic processes	P	GMP reductase 1 (EC 1.7.1.7) (Guanosine 5'-monophosphate oxidoreductase 1) (Guanosine monophosphate reductase 1)
ruditapes_c21511	biological_process	other biological processes	P	Ly6/PLAUR domain-containing protein 2 (Protein H8C4)
ruditapes_c15920	"synaptic transmission, cholinergic"	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	response to ethanol	other biological processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	response to chemical stimulus	other biological processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	neuron development	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	regulation of synapse structure and activity	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	response to amphetamine	other biological processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	neuron development	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	neurotransmitter catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	neurotransmitter catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	choline metabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	response to amphetamine	other biological processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	acetylcholine catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	acetylcholine catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	"synaptic transmission, cholinergic"	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	myofibril assembly	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	myofibril assembly	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	acetylcholine catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	acetylcholine catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	myofibril assembly	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	myofibril assembly	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	regulation of synapse structure and activity	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	neuromuscular junction development	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	neuromuscular junction development	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	neuromuscular junction development	developmental processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	neuromuscular junction development	cell organization and biogenesis	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	response to ethanol	other biological processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	choline metabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c13852	response to chemical stimulus	other biological processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	neurotransmitter catabolic process	other metabolic processes	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c15920	neurotransmitter catabolic process	cell-cell signaling	P	Acetylcholinesterase (AChE) (EC 3.1.1.7)
ruditapes_c29763	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase atr (Xatr) (EC 2.7.11.1) (Ataxia telangiectasia and Rad3-related protein)
ruditapes_c29763	DNA repair	stress response	P	Serine/threonine-protein kinase atr (Xatr) (EC 2.7.11.1) (Ataxia telangiectasia and Rad3-related protein)
ruditapes_c29763	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase atr (Xatr) (EC 2.7.11.1) (Ataxia telangiectasia and Rad3-related protein)
ruditapes_c29763	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase atr (Xatr) (EC 2.7.11.1) (Ataxia telangiectasia and Rad3-related protein)
ruditapes_c29763	peptidyl-serine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase atr (Xatr) (EC 2.7.11.1) (Ataxia telangiectasia and Rad3-related protein)
ruditapes_c13747	double-strand break repair via nonhomologous end joining	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c13747	double-strand break repair via nonhomologous end joining	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c13747	response to DNA damage stimulus	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c13747	DNA repair	stress response	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c13747	DNA repair	DNA metabolism	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c13747	phosphorylation	other metabolic processes	P	DNA-dependent protein kinase catalytic subunit (DNA-PK catalytic subunit) (DNA-PKcs) (EC 2.7.11.1)
ruditapes_c36527	translation	protein metabolism	P	60S ribosomal protein L24
ruditapes_lrc22575	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes2_lrc4997	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes2_lrc3296	translation	protein metabolism	P	40S ribosomal protein S13
ruditapes_c12859	multicellular organismal development	developmental processes	P	Protein Churchill
ruditapes_c12859	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein Churchill
ruditapes_c12859	"transcription, DNA-dependent"	RNA metabolism	P	Protein Churchill
ruditapes_c12859	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein Churchill
ruditapes_c14214	"transcription, DNA-dependent"	RNA metabolism	P	Protein Churchill
ruditapes_c14214	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein Churchill
ruditapes_c14214	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein Churchill
ruditapes_c14214	multicellular organismal development	developmental processes	P	Protein Churchill
ruditapes_c15660	cholesterol transport	transport	P	Steroidogenic acute regulatory protein (StAR) (START domain-containing protein 1) (StARD1) (Fragment)
ruditapes_c15660	lipid transport	transport	P	Steroidogenic acute regulatory protein (StAR) (START domain-containing protein 1) (StARD1) (Fragment)
ruditapes_c15660	transport	transport	P	Steroidogenic acute regulatory protein (StAR) (START domain-containing protein 1) (StARD1) (Fragment)
ruditapes_c15660	steroid biosynthetic process	other metabolic processes	P	Steroidogenic acute regulatory protein (StAR) (START domain-containing protein 1) (StARD1) (Fragment)
ruditapes_c25094	vesicle-mediated transport	transport	P	Blood vessel epicardial substance (Popeye domain-containing protein 1) (Popeye protein 1)
ruditapes_c25094	multicellular organismal development	developmental processes	P	Blood vessel epicardial substance (Popeye domain-containing protein 1) (Popeye protein 1)
ruditapes_c25094	regulation of cell shape	cell organization and biogenesis	P	Blood vessel epicardial substance (Popeye domain-containing protein 1) (Popeye protein 1)
ruditapes_c25094	positive regulation of locomotion	other biological processes	P	Blood vessel epicardial substance (Popeye domain-containing protein 1) (Popeye protein 1)
ruditapes_c25094	substrate adhesion-dependent cell spreading	cell adhesion	P	Blood vessel epicardial substance (Popeye domain-containing protein 1) (Popeye protein 1)
ruditapes_c25094	substrate adhesion-dependent cell spreading	cell organization and biogenesis	P	Blood vessel epicardial substance (Popeye domain-containing protein 1) (Popeye protein 1)
ruditapes_c25094	regulation of Cdc42 GTPase activity	signal transduction	P	Blood vessel epicardial substance (Popeye domain-containing protein 1) (Popeye protein 1)
ruditapes_c25094	positive regulation of receptor recycling	signal transduction	P	Blood vessel epicardial substance (Popeye domain-containing protein 1) (Popeye protein 1)
ruditapes_c25094	positive regulation of receptor recycling	protein metabolism	P	Blood vessel epicardial substance (Popeye domain-containing protein 1) (Popeye protein 1)
ruditapes_c25094	cell adhesion	cell adhesion	P	Blood vessel epicardial substance (Popeye domain-containing protein 1) (Popeye protein 1)
ruditapes_c25094	regulation of Rac GTPase activity	signal transduction	P	Blood vessel epicardial substance (Popeye domain-containing protein 1) (Popeye protein 1)
ruditapes2_c3874	translational elongation	protein metabolism	P	60S acidic ribosomal protein P0 (60S ribosomal protein L10E)
ruditapes2_c3874	ribosome biogenesis	other biological processes	P	60S acidic ribosomal protein P0 (60S ribosomal protein L10E)
ruditapes2_c1283	translational elongation	protein metabolism	P	60S acidic ribosomal protein P0 (60S ribosomal protein L10E)
ruditapes2_c1283	ribosome biogenesis	other biological processes	P	60S acidic ribosomal protein P0 (60S ribosomal protein L10E)
ruditapes_c24284	inflammatory response	stress response	P	Toll-like receptor 2 type-2
ruditapes_c24284	signal transduction	signal transduction	P	Toll-like receptor 2 type-2
ruditapes_c24284	detection of bacterial lipoprotein	other biological processes	P	Toll-like receptor 2 type-2
ruditapes_c24284	immune response	other biological processes	P	Toll-like receptor 2 type-2
ruditapes_c24284	innate immune response	stress response	P	Toll-like receptor 2 type-2
ruditapes_c30384	proteolysis	protein metabolism	P	Probable metalloendopeptidase G1-type (EC 3.4.24.-)
ruditapes_c30384	"viral assembly, maturation, egress, and release"	other biological processes	P	Probable metalloendopeptidase G1-type (EC 3.4.24.-)
ruditapes_lrc11916	dUTP metabolic process	other metabolic processes	P	Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (EC 3.6.1.23)
ruditapes_lrc11916	nucleotide metabolic process	other metabolic processes	P	Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (EC 3.6.1.23)
ruditapes_c18463	viral capsid assembly	cell organization and biogenesis	P	Capsid assembly protein UL37 homolog
ruditapes_c18463	virion assembly	cell organization and biogenesis	P	Capsid assembly protein UL37 homolog
ruditapes_c9140	proteolysis	protein metabolism	P	Deneddylase (EC 3.4.19.12) (EC 3.4.22.-)
ruditapes_c9140	interspecies interaction between organisms	other biological processes	P	Deneddylase (EC 3.4.19.12) (EC 3.4.22.-)
ruditapes_c5431	DNA packaging	cell organization and biogenesis	P	Portal protein UL6 homolog
ruditapes_c5220	mRNA transport	transport	P	Exportin-7 (Exp7) (Ran-binding protein 16)
ruditapes_c5220	nucleocytoplasmic transport	transport	P	Exportin-7 (Exp7) (Ran-binding protein 16)
ruditapes_c5220	intracellular protein transport	transport	P	Exportin-7 (Exp7) (Ran-binding protein 16)
ruditapes_c5220	protein transport	transport	P	Exportin-7 (Exp7) (Ran-binding protein 16)
ruditapes_c5220	transport	transport	P	Exportin-7 (Exp7) (Ran-binding protein 16)
ruditapes_c21549	calcium ion transport	transport	P	Sodium/potassium/calcium exchanger 3 (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Fragment)
ruditapes_c21549	potassium ion transport	transport	P	Sodium/potassium/calcium exchanger 3 (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Fragment)
ruditapes_c21549	transmembrane transport	transport	P	Sodium/potassium/calcium exchanger 3 (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Fragment)
ruditapes_c21549	cation transport	transport	P	Sodium/potassium/calcium exchanger 3 (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Fragment)
ruditapes_c21549	sodium ion transport	transport	P	Sodium/potassium/calcium exchanger 3 (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Fragment)
ruditapes_c21549	transport	transport	P	Sodium/potassium/calcium exchanger 3 (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Fragment)
ruditapes_c21549	transmembrane calcium ion transport	transport	P	Sodium/potassium/calcium exchanger 3 (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Fragment)
ruditapes_c21549	cellular calcium ion homeostasis	other biological processes	P	Sodium/potassium/calcium exchanger 3 (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Fragment)
ruditapes_c21549	ion transport	transport	P	Sodium/potassium/calcium exchanger 3 (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Fragment)
ruditapes_c23247	transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Sodium-dependent vitamin C transporter 2) (SVCT-2) (mSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c23247	L-ascorbic acid transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Sodium-dependent vitamin C transporter 2) (SVCT-2) (mSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c23247	transmembrane transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Sodium-dependent vitamin C transporter 2) (SVCT-2) (mSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c23247	L-ascorbic acid metabolic process	other metabolic processes	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Sodium-dependent vitamin C transporter 2) (SVCT-2) (mSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c23247	ion transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Sodium-dependent vitamin C transporter 2) (SVCT-2) (mSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c23247	response to oxidative stress	stress response	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Sodium-dependent vitamin C transporter 2) (SVCT-2) (mSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c23247	sodium ion transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Sodium-dependent vitamin C transporter 2) (SVCT-2) (mSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c11522	signal transduction	signal transduction	P	Tumor necrosis factor receptor superfamily member 21 (Death receptor 6) (CD antigen CD358)
ruditapes_c11522	neuron apoptosis	death	P	Tumor necrosis factor receptor superfamily member 21 (Death receptor 6) (CD antigen CD358)
ruditapes_c11522	apoptosis	death	P	Tumor necrosis factor receptor superfamily member 21 (Death receptor 6) (CD antigen CD358)
ruditapes_lrc38457	sodium ion transport	transport	P	Sodium-coupled neutral amino acid transporter 4 (Amino acid transporter A3) (Na(+)-coupled neutral amino acid transporter 4) (Solute carrier family 38 member 4) (System A amino acid transporter 3)
ruditapes_lrc38457	transport	transport	P	Sodium-coupled neutral amino acid transporter 4 (Amino acid transporter A3) (Na(+)-coupled neutral amino acid transporter 4) (Solute carrier family 38 member 4) (System A amino acid transporter 3)
ruditapes_lrc38457	ion transport	transport	P	Sodium-coupled neutral amino acid transporter 4 (Amino acid transporter A3) (Na(+)-coupled neutral amino acid transporter 4) (Solute carrier family 38 member 4) (System A amino acid transporter 3)
ruditapes_lrc38457	amino acid transport	transport	P	Sodium-coupled neutral amino acid transporter 4 (Amino acid transporter A3) (Na(+)-coupled neutral amino acid transporter 4) (Solute carrier family 38 member 4) (System A amino acid transporter 3)
ruditapes_c20110	very-long-chain fatty acid biosynthetic process	other metabolic processes	P	Elongation of very long chain fatty acids protein 4 (EC 2.3.1.199) (3-keto acyl-CoA synthase Elovl4) (ELOVL fatty acid elongase 4) (ELOVL FA elongase 4) (Very-long-chain 3-oxoacyl-CoA synthase 4)
ruditapes_c20110	fatty acid biosynthetic process	other metabolic processes	P	Elongation of very long chain fatty acids protein 4 (EC 2.3.1.199) (3-keto acyl-CoA synthase Elovl4) (ELOVL fatty acid elongase 4) (ELOVL FA elongase 4) (Very-long-chain 3-oxoacyl-CoA synthase 4)
ruditapes_c20110	"fatty acid elongation, saturated fatty acid"	other metabolic processes	P	Elongation of very long chain fatty acids protein 4 (EC 2.3.1.199) (3-keto acyl-CoA synthase Elovl4) (ELOVL fatty acid elongase 4) (ELOVL FA elongase 4) (Very-long-chain 3-oxoacyl-CoA synthase 4)
ruditapes_c20110	lipid biosynthetic process	other metabolic processes	P	Elongation of very long chain fatty acids protein 4 (EC 2.3.1.199) (3-keto acyl-CoA synthase Elovl4) (ELOVL fatty acid elongase 4) (ELOVL FA elongase 4) (Very-long-chain 3-oxoacyl-CoA synthase 4)
ruditapes_c7550	lung development	developmental processes	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	negative regulation of activin receptor signaling pathway	signal transduction	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	spermatogenesis	other biological processes	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	"transcription, DNA-dependent"	RNA metabolism	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	hemopoietic progenitor cell differentiation	developmental processes	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	negative regulation of BMP signaling pathway	signal transduction	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	adrenal gland development	developmental processes	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	male gonad development	developmental processes	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	kidney development	developmental processes	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	negative regulation of osteoclast differentiation	developmental processes	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	positive regulation of cell-cell adhesion	cell adhesion	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	ossification	developmental processes	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c7550	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Follistatin-related protein 3 (Follistatin-like protein 3) (Follistatin-related gene protein)
ruditapes_c28896	metabolic process	other metabolic processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 5 (E-NPP 5) (NPP-5) (EC 3.1.-.-)
ruditapes_c28896	cell communication	other biological processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 5 (E-NPP 5) (NPP-5) (EC 3.1.-.-)
ruditapes_c5474	"regulation of transcription, DNA-dependent"	RNA metabolism	P	C-Myc-binding protein (Associate of Myc 1) (AMY-1)
ruditapes_c5474	"transcription, DNA-dependent"	RNA metabolism	P	C-Myc-binding protein (Associate of Myc 1) (AMY-1)
ruditapes_s38268	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_s38268	negative regulation of neuron apoptosis	death	P	Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_s38268	nucleosome assembly	cell organization and biogenesis	P	Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)
ruditapes_c28388	interleukin-1-mediated signaling pathway	signal transduction	P	Interleukin-1 receptor-like 2 (Interleukin-1 receptor-related protein 2) (IL-1Rrp2) (IL1R-rp2)
ruditapes_c28388	innate immune response	stress response	P	Interleukin-1 receptor-like 2 (Interleukin-1 receptor-related protein 2) (IL-1Rrp2) (IL1R-rp2)
ruditapes_c28388	signal transduction	signal transduction	P	Interleukin-1 receptor-like 2 (Interleukin-1 receptor-related protein 2) (IL-1Rrp2) (IL1R-rp2)
ruditapes_c24396	intracellular transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (Ran-binding protein 2) (RanBP2) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c24396	protein folding	protein metabolism	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (Ran-binding protein 2) (RanBP2) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c24396	protein peptidyl-prolyl isomerization	protein metabolism	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (Ran-binding protein 2) (RanBP2) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c24396	protein transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (Ran-binding protein 2) (RanBP2) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c24396	mRNA transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (Ran-binding protein 2) (RanBP2) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c24396	transport	transport	P	E3 SUMO-protein ligase RanBP2 (EC 6.3.2.-) (Ran-binding protein 2) (RanBP2) [Includes: Putative peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Rotamase)]
ruditapes_c21383	signal transduction	signal transduction	P	p53-induced protein with a death domain (Leucine-rich repeat and death domain-containing protein)
ruditapes_c21383	apoptosis	death	P	p53-induced protein with a death domain (Leucine-rich repeat and death domain-containing protein)
ruditapes_c13658	smooth muscle contraction	other biological processes	P	Muscarinic acetylcholine receptor M3 (Mm3 mAChR)
ruditapes_c13658	digestion	other biological processes	P	Muscarinic acetylcholine receptor M3 (Mm3 mAChR)
ruditapes_c13658	regulation of vascular smooth muscle contraction	other biological processes	P	Muscarinic acetylcholine receptor M3 (Mm3 mAChR)
ruditapes_c13658	G-protein coupled receptor protein signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M3 (Mm3 mAChR)
ruditapes_c13658	muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M3 (Mm3 mAChR)
ruditapes_c13658	signal transduction	signal transduction	P	Muscarinic acetylcholine receptor M3 (Mm3 mAChR)
ruditapes_c13658	positive regulation of smooth muscle contraction	other biological processes	P	Muscarinic acetylcholine receptor M3 (Mm3 mAChR)
ruditapes_c13658	regulation of vasoconstriction	other biological processes	P	Muscarinic acetylcholine receptor M3 (Mm3 mAChR)
ruditapes_c13658	activation of phospholipase C activity by muscarinic acetylcholine receptor signaling pathway	signal transduction	P	Muscarinic acetylcholine receptor M3 (Mm3 mAChR)
ruditapes_c13658	"synaptic transmission, cholinergic"	cell-cell signaling	P	Muscarinic acetylcholine receptor M3 (Mm3 mAChR)
ruditapes_lrc33881	gamma-aminobutyric acid signaling pathway	signal transduction	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc32605	gamma-aminobutyric acid signaling pathway	signal transduction	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes2_c3457	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc35509	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes2_c3457	negative regulation of potassium ion transport	transport	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc33881	negative regulation of potassium ion transport	transport	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34265	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes2_lrc5968	gamma-aminobutyric acid signaling pathway	signal transduction	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc35286	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc32504	negative regulation of potassium ion transport	transport	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc35286	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc32605	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc35509	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34265	negative regulation of potassium ion transport	transport	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34553	gamma-aminobutyric acid signaling pathway	signal transduction	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34265	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc32504	gamma-aminobutyric acid signaling pathway	signal transduction	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes2_lrc5968	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34778	negative regulation of potassium ion transport	transport	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34553	negative regulation of potassium ion transport	transport	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34553	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes2_lrc5968	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes2_lrc5968	negative regulation of potassium ion transport	transport	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34778	gamma-aminobutyric acid signaling pathway	signal transduction	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc32605	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc33881	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34778	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes2_c3457	gamma-aminobutyric acid signaling pathway	signal transduction	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc32504	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34778	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc33881	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34553	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc35286	negative regulation of potassium ion transport	transport	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc35509	gamma-aminobutyric acid signaling pathway	signal transduction	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc32605	negative regulation of potassium ion transport	transport	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc35286	gamma-aminobutyric acid signaling pathway	signal transduction	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc32504	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc35509	negative regulation of potassium ion transport	transport	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_lrc34265	gamma-aminobutyric acid signaling pathway	signal transduction	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes2_c3457	"transcription, DNA-dependent"	RNA metabolism	P	Cyclic AMP-dependent transcription factor ATF-4 (cAMP-dependent transcription factor ATF-4) (Activating transcription factor 4) (rATF-4)
ruditapes_c21259	biological_process	other biological processes	P	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)
ruditapes_c8692	biological_process	other biological processes	P	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)
ruditapes_c8660	biological_process	other biological processes	P	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)
ruditapes_lrc38732	biological_process	other biological processes	P	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)
ruditapes2_lrc5627	biological_process	other biological processes	P	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)
ruditapes_c20865	ketone body biosynthetic process	other metabolic processes	P	Bile acyl-CoA synthetase (BACS) (EC 6.2.1.7) (Bile acid-CoA ligase) (BA-CoA ligase) (BAL) (Cholate--CoA ligase) (Fatty acid transport protein 5) (FATP-5) (Solute carrier family 27 member 5) (Very long-chain acyl-CoA synthetase-related protein) (VLACS-related) (VLACSR)
ruditapes_c20865	metabolic process	other metabolic processes	P	Bile acyl-CoA synthetase (BACS) (EC 6.2.1.7) (Bile acid-CoA ligase) (BA-CoA ligase) (BAL) (Cholate--CoA ligase) (Fatty acid transport protein 5) (FATP-5) (Solute carrier family 27 member 5) (Very long-chain acyl-CoA synthetase-related protein) (VLACS-related) (VLACSR)
ruditapes_c20865	plasma membrane long-chain fatty acid transport	transport	P	Bile acyl-CoA synthetase (BACS) (EC 6.2.1.7) (Bile acid-CoA ligase) (BA-CoA ligase) (BAL) (Cholate--CoA ligase) (Fatty acid transport protein 5) (FATP-5) (Solute carrier family 27 member 5) (Very long-chain acyl-CoA synthetase-related protein) (VLACS-related) (VLACSR)
ruditapes_c20865	triglyceride mobilization	other metabolic processes	P	Bile acyl-CoA synthetase (BACS) (EC 6.2.1.7) (Bile acid-CoA ligase) (BA-CoA ligase) (BAL) (Cholate--CoA ligase) (Fatty acid transport protein 5) (FATP-5) (Solute carrier family 27 member 5) (Very long-chain acyl-CoA synthetase-related protein) (VLACS-related) (VLACSR)
ruditapes_c20865	lipid metabolic process	other metabolic processes	P	Bile acyl-CoA synthetase (BACS) (EC 6.2.1.7) (Bile acid-CoA ligase) (BA-CoA ligase) (BAL) (Cholate--CoA ligase) (Fatty acid transport protein 5) (FATP-5) (Solute carrier family 27 member 5) (Very long-chain acyl-CoA synthetase-related protein) (VLACS-related) (VLACSR)
ruditapes_c20865	fatty acid metabolic process	other metabolic processes	P	Bile acyl-CoA synthetase (BACS) (EC 6.2.1.7) (Bile acid-CoA ligase) (BA-CoA ligase) (BAL) (Cholate--CoA ligase) (Fatty acid transport protein 5) (FATP-5) (Solute carrier family 27 member 5) (Very long-chain acyl-CoA synthetase-related protein) (VLACS-related) (VLACSR)
ruditapes_c20865	fatty acid transport	transport	P	Bile acyl-CoA synthetase (BACS) (EC 6.2.1.7) (Bile acid-CoA ligase) (BA-CoA ligase) (BAL) (Cholate--CoA ligase) (Fatty acid transport protein 5) (FATP-5) (Solute carrier family 27 member 5) (Very long-chain acyl-CoA synthetase-related protein) (VLACS-related) (VLACSR)
ruditapes_c20865	bile acid metabolic process	other metabolic processes	P	Bile acyl-CoA synthetase (BACS) (EC 6.2.1.7) (Bile acid-CoA ligase) (BA-CoA ligase) (BAL) (Cholate--CoA ligase) (Fatty acid transport protein 5) (FATP-5) (Solute carrier family 27 member 5) (Very long-chain acyl-CoA synthetase-related protein) (VLACS-related) (VLACSR)
ruditapes_c16641	oxidation reduction	other metabolic processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
ruditapes_c16641	hydrogen peroxide catabolic process	stress response	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
ruditapes_c16641	hydrogen peroxide catabolic process	other metabolic processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
ruditapes_c16641	thyroid hormone generation	other metabolic processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
ruditapes_c16641	hormone biosynthetic process	other metabolic processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
ruditapes_c16641	response to cAMP	other biological processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
ruditapes_c16641	response to oxidative stress	stress response	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
ruditapes_c16641	cuticle development	developmental processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
ruditapes_c16641	cytokine-mediated signaling pathway	signal transduction	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
ruditapes_c26702	Golgi organization	cell organization and biogenesis	P	Nuclear protein localization protein 4 homolog (Protein NPL4)
ruditapes_c26702	membrane fusion	cell organization and biogenesis	P	Nuclear protein localization protein 4 homolog (Protein NPL4)
ruditapes_c16047	proteolysis	protein metabolism	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_c16047	hair follicle development	developmental processes	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_c16047	response to drug	other biological processes	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_c16047	positive regulation of sodium ion transport	transport	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_c16047	response to mineralocorticoid stimulus	other biological processes	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_c16047	response to peptide hormone stimulus	other biological processes	P	Prostasin (EC 3.4.21.-) (Channel-activating protease 1) (CAP1) (Serine protease 8) [Cleaved into: Prostasin light chain; Prostasin heavy chain]
ruditapes_c23749	neuropeptide signaling pathway	signal transduction	P	"EGF, latrophilin and seven transmembrane domain-containing protein 1 (EGF-TM7-latrophilin-related protein) (ETL protein) [Cleaved into: EGF, latrophilin and seven transmembrane domain-containing protein 1 subunit alpha; EGF, latrophilin and seven transmembrane domain-containing protein 1 subunit beta]"
ruditapes_c23749	signal transduction	signal transduction	P	"EGF, latrophilin and seven transmembrane domain-containing protein 1 (EGF-TM7-latrophilin-related protein) (ETL protein) [Cleaved into: EGF, latrophilin and seven transmembrane domain-containing protein 1 subunit alpha; EGF, latrophilin and seven transmembrane domain-containing protein 1 subunit beta]"
ruditapes_c23749	cell surface receptor linked signal transduction	signal transduction	P	"EGF, latrophilin and seven transmembrane domain-containing protein 1 (EGF-TM7-latrophilin-related protein) (ETL protein) [Cleaved into: EGF, latrophilin and seven transmembrane domain-containing protein 1 subunit alpha; EGF, latrophilin and seven transmembrane domain-containing protein 1 subunit beta]"
ruditapes_c23749	G-protein coupled receptor protein signaling pathway	signal transduction	P	"EGF, latrophilin and seven transmembrane domain-containing protein 1 (EGF-TM7-latrophilin-related protein) (ETL protein) [Cleaved into: EGF, latrophilin and seven transmembrane domain-containing protein 1 subunit alpha; EGF, latrophilin and seven transmembrane domain-containing protein 1 subunit beta]"
ruditapes_c18612	endosome transport	transport	P	Lipopolysaccharide-responsive and beige-like anchor protein (Beige-like protein)
ruditapes_c18612	signal transduction	signal transduction	P	Lipopolysaccharide-responsive and beige-like anchor protein (Beige-like protein)
ruditapes_c11548	biological_process	other biological processes	P	Transmembrane protein 8A (M83 protein) (Transmembrane protein 8)
ruditapes_c11548	cell adhesion	cell adhesion	P	Transmembrane protein 8A (M83 protein) (Transmembrane protein 8)
ruditapes2_c3216	biological_process	other biological processes	P	Complement C1q-like protein 3 (Gliacolin)
ruditapes2_c5212	biological_process	other biological processes	P	Complement C1q-like protein 3 (Gliacolin)
ruditapes_c8763	biological_process	other biological processes	P	Complement C1q-like protein 3 (Gliacolin)
ruditapes_c11239	biological_process	other biological processes	P	Complement C1q-like protein 3 (Gliacolin)
ruditapes2_c5257	biological_process	other biological processes	P	Complement C1q-like protein 3 (Gliacolin)
ruditapes_lrc35687	biological_process	other biological processes	P	Complement C1q-like protein 3 (Gliacolin)
ruditapes_c606	biological_process	other biological processes	P	Complement C1q-like protein 3 (Gliacolin)
ruditapes_c11211	biological_process	other biological processes	P	Complement C1q-like protein 3 (Gliacolin)
ruditapes_c19684	protein ubiquitination	protein metabolism	P	Tripartite motif-containing protein 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM2) (Neural activity-related RING finger protein)
ruditapes_c19684	neuroprotection	death	P	Tripartite motif-containing protein 2 (EC 6.3.2.-) (E3 ubiquitin-protein ligase TRIM2) (Neural activity-related RING finger protein)
ruditapes_c22332	response to steroid hormone stimulus	other biological processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c22332	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c22332	cholesterol homeostasis	other biological processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c22332	transport	transport	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c22332	regulation of intracellular cholesterol transport	transport	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c22332	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2)
ruditapes_c20783	cell adhesion	cell adhesion	P	Basal cell adhesion molecule (B-CAM cell surface glycoprotein) (Lutheran antigen) (CD antigen CD239)
ruditapes_c20783	cell-matrix adhesion	cell adhesion	P	Basal cell adhesion molecule (B-CAM cell surface glycoprotein) (Lutheran antigen) (CD antigen CD239)
ruditapes_lrc20029	transport	transport	P	Low affinity sodium-glucose cotransporter (Sodium/glucose cotransporter 3) (Na(+)/glucose cotransporter 3) (Solute carrier family 5 member 4)
ruditapes_lrc20029	transmembrane transport	transport	P	Low affinity sodium-glucose cotransporter (Sodium/glucose cotransporter 3) (Na(+)/glucose cotransporter 3) (Solute carrier family 5 member 4)
ruditapes_lrc20029	sodium ion transport	transport	P	Low affinity sodium-glucose cotransporter (Sodium/glucose cotransporter 3) (Na(+)/glucose cotransporter 3) (Solute carrier family 5 member 4)
ruditapes_lrc20029	carbohydrate transport	transport	P	Low affinity sodium-glucose cotransporter (Sodium/glucose cotransporter 3) (Na(+)/glucose cotransporter 3) (Solute carrier family 5 member 4)
ruditapes_lrc20029	ion transport	transport	P	Low affinity sodium-glucose cotransporter (Sodium/glucose cotransporter 3) (Na(+)/glucose cotransporter 3) (Solute carrier family 5 member 4)
ruditapes2_c2417	chromosome segregation	other biological processes	P	Segregation and condensation protein A
ruditapes2_c2417	cell cycle	cell cycle and proliferation	P	Segregation and condensation protein A
ruditapes2_c2417	cell division	other biological processes	P	Segregation and condensation protein A
ruditapes2_c1874	phospholipid biosynthetic process	other metabolic processes	P	Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain]
ruditapes_c23216	glutamate metabolic process	other metabolic processes	P	Glutamate decarboxylase beta (GAD-beta) (EC 4.1.1.15)
ruditapes_c23216	carboxylic acid metabolic process	other metabolic processes	P	Glutamate decarboxylase beta (GAD-beta) (EC 4.1.1.15)
ruditapes_c15193	antibiotic biosynthetic process	other metabolic processes	P	4'-phosphopantetheinyl transferase ffp (EC 2.7.8.-) (Fengycin synthase-activating enzyme)
ruditapes_c15193	macromolecule biosynthetic process	other metabolic processes	P	4'-phosphopantetheinyl transferase ffp (EC 2.7.8.-) (Fengycin synthase-activating enzyme)
ruditapes_c15193	fatty acid biosynthetic process	other metabolic processes	P	4'-phosphopantetheinyl transferase ffp (EC 2.7.8.-) (Fengycin synthase-activating enzyme)
ruditapes_c15554	glutamate metabolic process	other metabolic processes	P	Glutamate decarboxylase alpha (GAD-alpha) (EC 4.1.1.15)
ruditapes_c15554	carboxylic acid metabolic process	other metabolic processes	P	Glutamate decarboxylase alpha (GAD-alpha) (EC 4.1.1.15)
ruditapes_c26343	electron transport chain	other metabolic processes	P	Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.9.1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (Rieske iron-sulfur protein) (ISP) (RISP)
ruditapes_c26343	oxidation reduction	other metabolic processes	P	Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.9.1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (Rieske iron-sulfur protein) (ISP) (RISP)
ruditapes_c26343	transport	transport	P	Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.9.1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (Rieske iron-sulfur protein) (ISP) (RISP)
ruditapes_c5061	"transcription, DNA-dependent"	RNA metabolism	P	Transcription termination factor Rho (EC 3.6.4.-) (ATP-dependent helicase Rho)
ruditapes_c5061	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription termination factor Rho (EC 3.6.4.-) (ATP-dependent helicase Rho)
ruditapes_c5061	transcription termination	RNA metabolism	P	Transcription termination factor Rho (EC 3.6.4.-) (ATP-dependent helicase Rho)
ruditapes_c5061	transcription termination	cell organization and biogenesis	P	Transcription termination factor Rho (EC 3.6.4.-) (ATP-dependent helicase Rho)
ruditapes2_c1827	cytoskeleton organization	cell organization and biogenesis	P	Profilin-5
ruditapes2_c1827	actin cytoskeleton organization	cell organization and biogenesis	P	Profilin-5
ruditapes_c15290	protein transport	transport	P	Vacuolar protein sorting-associated protein 36 (AtVPS36) (ESCRT-II complex subunit VPS36)
ruditapes_c15290	transport	transport	P	Vacuolar protein sorting-associated protein 36 (AtVPS36) (ESCRT-II complex subunit VPS36)
ruditapes_c11540	biological_process	other biological processes	P	Putative FBD-associated F-box protein At5g38570
ruditapes_c8514	protein modification process	protein metabolism	P	Protein ELC-like (ESCRT-I complex subunit VPS23 homolog 2) (Vacuolar protein sorting-associated protein 23 homolog 2)
ruditapes_c8514	transport	transport	P	Protein ELC-like (ESCRT-I complex subunit VPS23 homolog 2) (Vacuolar protein sorting-associated protein 23 homolog 2)
ruditapes_c8514	protein transport	transport	P	Protein ELC-like (ESCRT-I complex subunit VPS23 homolog 2) (Vacuolar protein sorting-associated protein 23 homolog 2)
ruditapes_c27654	phosphorylation	other metabolic processes	P	Probable L-type lectin-domain containing receptor kinase S.5 (LecRK-S.5) (EC 2.7.11.1)
ruditapes_c27654	protein amino acid phosphorylation	protein metabolism	P	Probable L-type lectin-domain containing receptor kinase S.5 (LecRK-S.5) (EC 2.7.11.1)
ruditapes_c12956	biological_process	other biological processes	P	"APO protein 3, mitochondrial"
ruditapes_c27999	xylan biosynthetic process	other metabolic processes	P	Protein IRX15-LIKE
ruditapes_c27999	secondary cell wall biogenesis	other biological processes	P	Protein IRX15-LIKE
ruditapes_c11130	"transcription, DNA-dependent"	RNA metabolism	P	B3 domain-containing protein At5g57720
ruditapes_c11130	"regulation of transcription, DNA-dependent"	RNA metabolism	P	B3 domain-containing protein At5g57720
ruditapes_c16771	nitrate assimilation	other metabolic processes	P	"Fumarate hydratase 2, chloroplastic (Fumarase 2) (EC 4.2.1.2)"
ruditapes_c16771	fumarate metabolic process	other metabolic processes	P	"Fumarate hydratase 2, chloroplastic (Fumarase 2) (EC 4.2.1.2)"
ruditapes_c16771	response to salt stress	stress response	P	"Fumarate hydratase 2, chloroplastic (Fumarase 2) (EC 4.2.1.2)"
ruditapes_c16771	tricarboxylic acid cycle	other metabolic processes	P	"Fumarate hydratase 2, chloroplastic (Fumarase 2) (EC 4.2.1.2)"
ruditapes_c19581	cellular metabolic process	other metabolic processes	P	UDP-glucuronic acid decarboxylase 3 (EC 4.1.1.35) (UDP-XYL synthase 3) (UDP-glucuronate decarboxylase 3) (UGD) (UXS-3)
ruditapes_c19581	D-xylose metabolic process	other metabolic processes	P	UDP-glucuronic acid decarboxylase 3 (EC 4.1.1.35) (UDP-XYL synthase 3) (UDP-glucuronate decarboxylase 3) (UGD) (UXS-3)
ruditapes_c7464	cytoskeleton organization	cell organization and biogenesis	P	ADP-ribosylation factor GTPase-activating protein AGD1 (ARF GAP AGD1) (Protein ARF-GAP DOMAIN 1) (AtAGD1)
ruditapes_c7464	positive regulation of GTPase activity	other biological processes	P	ADP-ribosylation factor GTPase-activating protein AGD1 (ARF GAP AGD1) (Protein ARF-GAP DOMAIN 1) (AtAGD1)
ruditapes_c7464	transport	transport	P	ADP-ribosylation factor GTPase-activating protein AGD1 (ARF GAP AGD1) (Protein ARF-GAP DOMAIN 1) (AtAGD1)
ruditapes_c7464	regulation of ARF GTPase activity	signal transduction	P	ADP-ribosylation factor GTPase-activating protein AGD1 (ARF GAP AGD1) (Protein ARF-GAP DOMAIN 1) (AtAGD1)
ruditapes_c1260	chromatin modification	cell organization and biogenesis	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 (SMARCA3-like protein 3) (EC 3.6.4.-)
ruditapes_c1260	DNA repair	stress response	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 (SMARCA3-like protein 3) (EC 3.6.4.-)
ruditapes_c1260	DNA repair	DNA metabolism	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 (SMARCA3-like protein 3) (EC 3.6.4.-)
ruditapes_c1260	response to DNA damage stimulus	stress response	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 (SMARCA3-like protein 3) (EC 3.6.4.-)
ruditapes_c31291	multicellular organismal development	developmental processes	P	LRR receptor-like serine/threonine-protein kinase GSO2 (EC 2.7.11.1) (Protein EMBRYO SAC DEVELOPMENT ARREST 23) (Protein GASSHO 2)
ruditapes_c31291	epidermis development	developmental processes	P	LRR receptor-like serine/threonine-protein kinase GSO2 (EC 2.7.11.1) (Protein EMBRYO SAC DEVELOPMENT ARREST 23) (Protein GASSHO 2)
ruditapes_c31291	protein amino acid phosphorylation	protein metabolism	P	LRR receptor-like serine/threonine-protein kinase GSO2 (EC 2.7.11.1) (Protein EMBRYO SAC DEVELOPMENT ARREST 23) (Protein GASSHO 2)
ruditapes_c31291	embryo sac development	developmental processes	P	LRR receptor-like serine/threonine-protein kinase GSO2 (EC 2.7.11.1) (Protein EMBRYO SAC DEVELOPMENT ARREST 23) (Protein GASSHO 2)
ruditapes_c31291	embryonic development	developmental processes	P	LRR receptor-like serine/threonine-protein kinase GSO2 (EC 2.7.11.1) (Protein EMBRYO SAC DEVELOPMENT ARREST 23) (Protein GASSHO 2)
ruditapes_c31291	phosphorylation	other metabolic processes	P	LRR receptor-like serine/threonine-protein kinase GSO2 (EC 2.7.11.1) (Protein EMBRYO SAC DEVELOPMENT ARREST 23) (Protein GASSHO 2)
ruditapes_c18853	lipid metabolic process	other metabolic processes	P	Probable long-chain-alcohol O-fatty-acyltransferase 5 (EC 2.3.1.75) (Wax synthase 5)
ruditapes_c18853	biological_process	other biological processes	P	Probable long-chain-alcohol O-fatty-acyltransferase 5 (EC 2.3.1.75) (Wax synthase 5)
ruditapes_c18853	lipid biosynthetic process	other metabolic processes	P	Probable long-chain-alcohol O-fatty-acyltransferase 5 (EC 2.3.1.75) (Wax synthase 5)
ruditapes_c8719	lipid metabolic process	other metabolic processes	P	Probable long-chain-alcohol O-fatty-acyltransferase 6 (EC 2.3.1.75) (Wax synthase 6)
ruditapes_c8719	biological_process	other biological processes	P	Probable long-chain-alcohol O-fatty-acyltransferase 6 (EC 2.3.1.75) (Wax synthase 6)
ruditapes_c8719	lipid biosynthetic process	other metabolic processes	P	Probable long-chain-alcohol O-fatty-acyltransferase 6 (EC 2.3.1.75) (Wax synthase 6)
ruditapes2_c5929	multicellular organismal development	developmental processes	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes2_c4091	multicellular organismal development	developmental processes	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes_c5506	multicellular organismal development	developmental processes	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes2_c5929	response to stress	stress response	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes2_c6217	response to stress	stress response	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes_c5506	response to salt stress	stress response	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes_lrc34704	response to salt stress	stress response	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes_c5506	response to stress	stress response	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes_lrc34704	multicellular organismal development	developmental processes	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes_lrc34704	response to stress	stress response	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes2_c6217	response to salt stress	stress response	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes2_c5929	response to salt stress	stress response	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes2_c6217	multicellular organismal development	developmental processes	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes2_c4091	response to stress	stress response	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes2_c4091	response to salt stress	stress response	P	Probable inactive poly [ADP-ribose] polymerase SRO5 (Protein SIMILAR TO RCD ONE 5)
ruditapes_c11541	rRNA processing	RNA metabolism	P	H/ACA ribonucleoprotein complex subunit 1-like protein 2
ruditapes_c11541	snRNA pseudouridine synthesis	RNA metabolism	P	H/ACA ribonucleoprotein complex subunit 1-like protein 2
ruditapes_c11541	ribosome biogenesis	other biological processes	P	H/ACA ribonucleoprotein complex subunit 1-like protein 2
ruditapes_c28907	"transcription, DNA-dependent"	RNA metabolism	P	B3 domain-containing protein At5g18090
ruditapes_c28907	"regulation of transcription, DNA-dependent"	RNA metabolism	P	B3 domain-containing protein At5g18090
ruditapes_c22674	oxidation reduction	other metabolic processes	P	Peroxidase 62 (Atperox P62) (EC 1.11.1.7) (ATP24a)
ruditapes_c22674	defense response to fungus	stress response	P	Peroxidase 62 (Atperox P62) (EC 1.11.1.7) (ATP24a)
ruditapes_c22674	hydrogen peroxide catabolic process	stress response	P	Peroxidase 62 (Atperox P62) (EC 1.11.1.7) (ATP24a)
ruditapes_c22674	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidase 62 (Atperox P62) (EC 1.11.1.7) (ATP24a)
ruditapes_c22674	response to oxidative stress	stress response	P	Peroxidase 62 (Atperox P62) (EC 1.11.1.7) (ATP24a)
ruditapes_c13711	phosphorylation	other metabolic processes	P	"6-phosphofructokinase 4, chloroplastic (Phosphofructokinase 4) (EC 2.7.1.11) (Phosphohexokinase 4)"
ruditapes_c13711	glycolysis	other metabolic processes	P	"6-phosphofructokinase 4, chloroplastic (Phosphofructokinase 4) (EC 2.7.1.11) (Phosphohexokinase 4)"
ruditapes_c1619	defense response	stress response	P	Protein DA1-related 4
ruditapes_c17619	telomere maintenance via telomerase	DNA metabolism	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	telomere maintenance via telomerase	cell organization and biogenesis	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	regulation of telomere maintenance	DNA metabolism	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	regulation of telomere maintenance	cell organization and biogenesis	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	telomere maintenance in response to DNA damage	stress response	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	telomere maintenance in response to DNA damage	DNA metabolism	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	regulation of chromosome organization	cell organization and biogenesis	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	meiosis	cell cycle and proliferation	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	multicellular organism reproduction	other biological processes	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	telomere maintenance in response to DNA damage	cell organization and biogenesis	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	response to aluminum ion	other biological processes	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	DNA repair	stress response	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	DNA repair	DNA metabolism	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	response to gamma radiation	other biological processes	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes_c17619	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase ATR (AtATR) (EC 2.7.11.1) (Ataxia telangiectasia-mutated and Rad3-related homolog) (DNA repair protein ATR) (Rad3-like protein) (AtRAD3)
ruditapes2_c3115	"negative regulation of gene expression, epigenetic"	other metabolic processes	P	Putative E3 ubiquitin-protein ligase RING1a (EC 6.3.2.-) (Polycomb complex protein RING1a) (Protein RING1a) (AtRING1a) (Ring finger protein 434)
ruditapes2_c3115	maintenance of shoot apical meristem identity	developmental processes	P	Putative E3 ubiquitin-protein ligase RING1a (EC 6.3.2.-) (Polycomb complex protein RING1a) (Protein RING1a) (AtRING1a) (Ring finger protein 434)
ruditapes2_c3115	"transcription, DNA-dependent"	RNA metabolism	P	Putative E3 ubiquitin-protein ligase RING1a (EC 6.3.2.-) (Polycomb complex protein RING1a) (Protein RING1a) (AtRING1a) (Ring finger protein 434)
ruditapes2_c3115	maintenance of floral meristem identity	developmental processes	P	Putative E3 ubiquitin-protein ligase RING1a (EC 6.3.2.-) (Polycomb complex protein RING1a) (Protein RING1a) (AtRING1a) (Ring finger protein 434)
ruditapes2_c3115	maintenance of inflorescence meristem identity	developmental processes	P	Putative E3 ubiquitin-protein ligase RING1a (EC 6.3.2.-) (Polycomb complex protein RING1a) (Protein RING1a) (AtRING1a) (Ring finger protein 434)
ruditapes2_c3115	cell fate determination	other biological processes	P	Putative E3 ubiquitin-protein ligase RING1a (EC 6.3.2.-) (Polycomb complex protein RING1a) (Protein RING1a) (AtRING1a) (Ring finger protein 434)
ruditapes2_c3115	chromatin modification	cell organization and biogenesis	P	Putative E3 ubiquitin-protein ligase RING1a (EC 6.3.2.-) (Polycomb complex protein RING1a) (Protein RING1a) (AtRING1a) (Ring finger protein 434)
ruditapes2_c3115	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative E3 ubiquitin-protein ligase RING1a (EC 6.3.2.-) (Polycomb complex protein RING1a) (Protein RING1a) (AtRING1a) (Ring finger protein 434)
ruditapes2_c3115	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative E3 ubiquitin-protein ligase RING1a (EC 6.3.2.-) (Polycomb complex protein RING1a) (Protein RING1a) (AtRING1a) (Ring finger protein 434)
ruditapes_c13515	defense response	stress response	P	Probable disease resistance protein At5g66900
ruditapes_c31493	cellular component organization	cell organization and biogenesis	P	Formin-like protein 20 (AtFH20)
ruditapes_c31493	actin cytoskeleton organization	cell organization and biogenesis	P	Formin-like protein 20 (AtFH20)
ruditapes_c24783	biological_process	other biological processes	P	Pentatricopeptide repeat-containing protein At5g39350
ruditapes_lrc34294	blue light signaling pathway	signal transduction	P	Root phototropism protein 3 (BTB/POZ domain-containing protein RPT3) (Non-phototropic hypocotyl protein 3)
ruditapes_lrc34294	response to light stimulus	other biological processes	P	Root phototropism protein 3 (BTB/POZ domain-containing protein RPT3) (Non-phototropic hypocotyl protein 3)
ruditapes_s39168	signal transduction	signal transduction	P	Root phototropism protein 3 (BTB/POZ domain-containing protein RPT3) (Non-phototropic hypocotyl protein 3)
ruditapes_s39168	phototropism	other biological processes	P	Root phototropism protein 3 (BTB/POZ domain-containing protein RPT3) (Non-phototropic hypocotyl protein 3)
ruditapes_s39168	blue light signaling pathway	signal transduction	P	Root phototropism protein 3 (BTB/POZ domain-containing protein RPT3) (Non-phototropic hypocotyl protein 3)
ruditapes_lrc34294	phototropism	other biological processes	P	Root phototropism protein 3 (BTB/POZ domain-containing protein RPT3) (Non-phototropic hypocotyl protein 3)
ruditapes_s39168	response to light stimulus	other biological processes	P	Root phototropism protein 3 (BTB/POZ domain-containing protein RPT3) (Non-phototropic hypocotyl protein 3)
ruditapes_lrc34294	signal transduction	signal transduction	P	Root phototropism protein 3 (BTB/POZ domain-containing protein RPT3) (Non-phototropic hypocotyl protein 3)
ruditapes_c14050	pollen tube growth	developmental processes	P	Phosphatidylinositol 4-kinase beta 1 (PI4-kinase beta 1) (PtdIns-4-kinase beta 1) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta1) (AtPI4Kbeta1) (PI-4Kbeta1)
ruditapes_c14050	multicellular organismal development	developmental processes	P	Phosphatidylinositol 4-kinase beta 1 (PI4-kinase beta 1) (PtdIns-4-kinase beta 1) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta1) (AtPI4Kbeta1) (PI-4Kbeta1)
ruditapes_c14050	phosphoinositide phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-kinase beta 1 (PI4-kinase beta 1) (PtdIns-4-kinase beta 1) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta1) (AtPI4Kbeta1) (PI-4Kbeta1)
ruditapes_c14050	root hair cell tip growth	developmental processes	P	Phosphatidylinositol 4-kinase beta 1 (PI4-kinase beta 1) (PtdIns-4-kinase beta 1) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta1) (AtPI4Kbeta1) (PI-4Kbeta1)
ruditapes_c14050	phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-kinase beta 1 (PI4-kinase beta 1) (PtdIns-4-kinase beta 1) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta1) (AtPI4Kbeta1) (PI-4Kbeta1)
ruditapes_c14050	phosphoinositide-mediated signaling	signal transduction	P	Phosphatidylinositol 4-kinase beta 1 (PI4-kinase beta 1) (PtdIns-4-kinase beta 1) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase beta1) (AtPI4Kbeta1) (PI-4Kbeta1)
ruditapes_c20828	rRNA processing	RNA metabolism	P	U3 small nucleolar RNA-associated protein 18 homolog
ruditapes_c20828	biological_process	other biological processes	P	U3 small nucleolar RNA-associated protein 18 homolog
ruditapes_c21253	biological_process	other biological processes	P	"Pentatricopeptide repeat-containing protein At5g40410, mitochondrial"
ruditapes_lrc32169	response to DNA damage stimulus	stress response	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32169	chromatin modification	cell organization and biogenesis	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32804	response to DNA damage stimulus	stress response	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32169	DNA mediated transformation	other biological processes	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32169	double-strand break repair via homologous recombination	DNA metabolism	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32169	DNA repair	stress response	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32169	DNA repair	DNA metabolism	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32804	chromatin modification	cell organization and biogenesis	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32169	double-strand break repair via homologous recombination	stress response	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32804	DNA repair	stress response	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32804	DNA repair	DNA metabolism	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32804	double-strand break repair via homologous recombination	stress response	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32804	double-strand break repair via homologous recombination	DNA metabolism	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_lrc32804	DNA mediated transformation	other biological processes	P	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (SMARCA3-like protein 2) (EC 3.6.4.-)
ruditapes_c9973	cell cycle	cell cycle and proliferation	P	Transcription factor E2FA (E2F transcription factor-3) (AtE2F3)
ruditapes_c9973	positive regulation of meiotic cell cycle	cell cycle and proliferation	P	Transcription factor E2FA (E2F transcription factor-3) (AtE2F3)
ruditapes_c9973	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor E2FA (E2F transcription factor-3) (AtE2F3)
ruditapes_c9973	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor E2FA (E2F transcription factor-3) (AtE2F3)
ruditapes_c9973	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor E2FA (E2F transcription factor-3) (AtE2F3)
ruditapes_c15896	lipid catabolic process	other metabolic processes	P	GDSL esterase/lipase At1g28660 (EC 3.1.1.-) (Extracellular lipase At1g28660)
ruditapes_c15896	lipid metabolic process	other metabolic processes	P	GDSL esterase/lipase At1g28660 (EC 3.1.1.-) (Extracellular lipase At1g28660)
ruditapes2_c2222	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 27 (EC 3.4.19.12) (Deubiquitinating enzyme 27) (AtUBP27) (Ubiquitin thioesterase 27) (Ubiquitin-specific-processing protease 27)
ruditapes2_c2222	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 27 (EC 3.4.19.12) (Deubiquitinating enzyme 27) (AtUBP27) (Ubiquitin thioesterase 27) (Ubiquitin-specific-processing protease 27)
ruditapes_c29029	protein deubiquitination	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (AtUBP15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_c29029	cell proliferation	cell cycle and proliferation	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (AtUBP15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_c29029	flower development	developmental processes	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (AtUBP15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_c29029	leaf development	developmental processes	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (AtUBP15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_c29029	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (AtUBP15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_c29029	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (AtUBP15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_c29029	root development	developmental processes	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (AtUBP15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_c29029	shoot development	developmental processes	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (AtUBP15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_c29029	fruit development	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.4.19.12) (Deubiquitinating enzyme 15) (AtUBP15) (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15)
ruditapes_c18296	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.4.19.12) (Deubiquitinating enzyme 12) (AtUBP12) (Ubiquitin thioesterase 12) (Ubiquitin-specific-processing protease 12)
ruditapes_c18296	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.4.19.12) (Deubiquitinating enzyme 12) (AtUBP12) (Ubiquitin thioesterase 12) (Ubiquitin-specific-processing protease 12)
ruditapes_c27749	double-strand break repair via nonhomologous end joining	stress response	P	ATP-dependent DNA helicase 2 subunit KU70 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit)
ruditapes_c27749	double-strand break repair via nonhomologous end joining	DNA metabolism	P	ATP-dependent DNA helicase 2 subunit KU70 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit)
ruditapes_c27749	DNA repair	stress response	P	ATP-dependent DNA helicase 2 subunit KU70 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit)
ruditapes_c27749	DNA repair	DNA metabolism	P	ATP-dependent DNA helicase 2 subunit KU70 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit)
ruditapes_c27749	telomere maintenance	DNA metabolism	P	ATP-dependent DNA helicase 2 subunit KU70 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit)
ruditapes_c27749	telomere maintenance	cell organization and biogenesis	P	ATP-dependent DNA helicase 2 subunit KU70 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit)
ruditapes_c27749	DNA recombination	DNA metabolism	P	ATP-dependent DNA helicase 2 subunit KU70 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit)
ruditapes_c27749	response to heat	stress response	P	ATP-dependent DNA helicase 2 subunit KU70 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit)
ruditapes_c27749	response to DNA damage stimulus	stress response	P	ATP-dependent DNA helicase 2 subunit KU70 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit)
ruditapes_lrc17644	double-strand break repair via nonhomologous end joining	stress response	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_lrc17644	double-strand break repair via nonhomologous end joining	DNA metabolism	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_lrc17644	DNA recombination	DNA metabolism	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_lrc17644	DNA repair	stress response	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_lrc17644	DNA repair	DNA metabolism	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_lrc17644	double-strand break repair	stress response	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_lrc17644	double-strand break repair	DNA metabolism	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_lrc17644	response to DNA damage stimulus	stress response	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_lrc17644	response to heat	stress response	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_lrc17644	DNA integration	DNA metabolism	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_lrc17644	telomere maintenance	DNA metabolism	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_lrc17644	telomere maintenance	cell organization and biogenesis	P	ATP-dependent DNA helicase 2 subunit KU80 (EC 3.6.4.12) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit)
ruditapes_c24744	mitosis	cell cycle and proliferation	P	Sister chromatid cohesion 1 protein 2 (SCC1 homolog 2) (AtRAD21-1)
ruditapes_c24744	mitosis	cell organization and biogenesis	P	Sister chromatid cohesion 1 protein 2 (SCC1 homolog 2) (AtRAD21-1)
ruditapes_c24744	double-strand break repair	stress response	P	Sister chromatid cohesion 1 protein 2 (SCC1 homolog 2) (AtRAD21-1)
ruditapes_c24744	double-strand break repair	DNA metabolism	P	Sister chromatid cohesion 1 protein 2 (SCC1 homolog 2) (AtRAD21-1)
ruditapes_c24744	cell division	other biological processes	P	Sister chromatid cohesion 1 protein 2 (SCC1 homolog 2) (AtRAD21-1)
ruditapes_c24744	chromosome segregation	other biological processes	P	Sister chromatid cohesion 1 protein 2 (SCC1 homolog 2) (AtRAD21-1)
ruditapes_c24744	cell cycle	cell cycle and proliferation	P	Sister chromatid cohesion 1 protein 2 (SCC1 homolog 2) (AtRAD21-1)
ruditapes_c29389	biological_process	other biological processes	P	Thaumatin-like protein 1a (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) (allergen Mal d 2)
ruditapes2_c3116	biological_process	other biological processes	P	Thaumatin-like protein 1a (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) (allergen Mal d 2)
ruditapes2_c6476	biological_process	other biological processes	P	Thaumatin-like protein 1a (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) (allergen Mal d 2)
ruditapes_c21943	DNA replication	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4B (EC 3.6.4.12) (RecQ-like protein 4B) (AtRecQ4B) (AtRecQl4B)
ruditapes_c21943	DNA recombination	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4B (EC 3.6.4.12) (RecQ-like protein 4B) (AtRecQ4B) (AtRecQl4B)
ruditapes_c21943	DNA repair	stress response	P	ATP-dependent DNA helicase Q-like 4B (EC 3.6.4.12) (RecQ-like protein 4B) (AtRecQ4B) (AtRecQl4B)
ruditapes_c21943	DNA repair	DNA metabolism	P	ATP-dependent DNA helicase Q-like 4B (EC 3.6.4.12) (RecQ-like protein 4B) (AtRecQ4B) (AtRecQl4B)
ruditapes_c21943	cellular response to cold	stress response	P	ATP-dependent DNA helicase Q-like 4B (EC 3.6.4.12) (RecQ-like protein 4B) (AtRecQ4B) (AtRecQl4B)
ruditapes_c21943	cellular metabolic process	other metabolic processes	P	ATP-dependent DNA helicase Q-like 4B (EC 3.6.4.12) (RecQ-like protein 4B) (AtRecQ4B) (AtRecQl4B)
ruditapes_c22738	sterol biosynthetic process	other metabolic processes	P	"Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase (EC 5.3.3.5) (Cholestenol Delta-isomerase) (Delta(8)-Delta(7) sterol isomerase) (D8-D7 sterol isomerase)"
ruditapes_c22738	sterol metabolic process	other metabolic processes	P	"Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase (EC 5.3.3.5) (Cholestenol Delta-isomerase) (Delta(8)-Delta(7) sterol isomerase) (D8-D7 sterol isomerase)"
ruditapes_c22738	lipid biosynthetic process	other metabolic processes	P	"Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase (EC 5.3.3.5) (Cholestenol Delta-isomerase) (Delta(8)-Delta(7) sterol isomerase) (D8-D7 sterol isomerase)"
ruditapes_c22738	steroid biosynthetic process	other metabolic processes	P	"Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase (EC 5.3.3.5) (Cholestenol Delta-isomerase) (Delta(8)-Delta(7) sterol isomerase) (D8-D7 sterol isomerase)"
ruditapes_c16898	translation	protein metabolism	P	"Peptide deformylase 1B, chloroplastic/mitochondrial (AtDEF2) (AtPDF1B) (PDF 1B) (EC 3.5.1.88) (Polypeptide deformylase)"
ruditapes_c23252	auxin biosynthetic process	other metabolic processes	P	Probable indole-3-pyruvate monooxygenase YUCCA10 (EC 1.14.13.168) (Flavin-containing monooxygenase YUCCA10)
ruditapes_c23252	oxidation reduction	other metabolic processes	P	Probable indole-3-pyruvate monooxygenase YUCCA10 (EC 1.14.13.168) (Flavin-containing monooxygenase YUCCA10)
ruditapes_c23252	regulation of anatomical structure morphogenesis	other biological processes	P	Probable indole-3-pyruvate monooxygenase YUCCA10 (EC 1.14.13.168) (Flavin-containing monooxygenase YUCCA10)
ruditapes_s39527	cell wall organization	cell organization and biogenesis	P	Putative cellulose synthase-like protein D6 (AtCslD6) (EC 2.4.1.-)
ruditapes_s39527	cellulose biosynthetic process	other metabolic processes	P	Putative cellulose synthase-like protein D6 (AtCslD6) (EC 2.4.1.-)
ruditapes2_c1811	electron transport chain	other metabolic processes	P	Glutaredoxin-C3 (AtGrxC3)
ruditapes2_c1811	cell redox homeostasis	other biological processes	P	Glutaredoxin-C3 (AtGrxC3)
ruditapes2_c1811	transport	transport	P	Glutaredoxin-C3 (AtGrxC3)
ruditapes_c14689	flower development	developmental processes	P	Histone acetyltransferase HAC12 (EC 2.3.1.48)
ruditapes_c14689	histone acetylation	protein metabolism	P	Histone acetyltransferase HAC12 (EC 2.3.1.48)
ruditapes_c14689	histone acetylation	cell organization and biogenesis	P	Histone acetyltransferase HAC12 (EC 2.3.1.48)
ruditapes_c14689	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone acetyltransferase HAC12 (EC 2.3.1.48)
ruditapes_c14689	"transcription, DNA-dependent"	RNA metabolism	P	Histone acetyltransferase HAC12 (EC 2.3.1.48)
ruditapes_c14689	protein amino acid acetylation	protein metabolism	P	Histone acetyltransferase HAC12 (EC 2.3.1.48)
ruditapes_c14689	chromatin modification	cell organization and biogenesis	P	Histone acetyltransferase HAC12 (EC 2.3.1.48)
ruditapes_s35792	oxidation reduction	other metabolic processes	P	Peroxidase 10 (Atperox P10) (EC 1.11.1.7) (ATP5a)
ruditapes_s35792	response to oxidative stress	stress response	P	Peroxidase 10 (Atperox P10) (EC 1.11.1.7) (ATP5a)
ruditapes_s35792	hydrogen peroxide catabolic process	stress response	P	Peroxidase 10 (Atperox P10) (EC 1.11.1.7) (ATP5a)
ruditapes_s35792	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidase 10 (Atperox P10) (EC 1.11.1.7) (ATP5a)
ruditapes_c1927	protein amino acid phosphorylation	protein metabolism	P	CDPK-related kinase 8 (AtCRK8) (EC 2.7.11.1) (Calcium/calmodulin-dependent protein kinase CRK8)
ruditapes_c1927	phosphorylation	other metabolic processes	P	CDPK-related kinase 8 (AtCRK8) (EC 2.7.11.1) (Calcium/calmodulin-dependent protein kinase CRK8)
ruditapes_c16798	metabolic process	other metabolic processes	P	Probable carboxylesterase 4 (AtCXE4) (EC 3.1.1.1)
ruditapes_lrc35336	translation	protein metabolism	P	40S ribosomal protein S15-3
ruditapes_c8281	"transcription, DNA-dependent"	RNA metabolism	P	Calmodulin-binding transcription activator 1 (Ethylene-induced calmodulin-binding protein b) (EICBP.b) (Signal-responsive protein 2)
ruditapes_c8281	response to freezing	stress response	P	Calmodulin-binding transcription activator 1 (Ethylene-induced calmodulin-binding protein b) (EICBP.b) (Signal-responsive protein 2)
ruditapes_c8281	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Calmodulin-binding transcription activator 1 (Ethylene-induced calmodulin-binding protein b) (EICBP.b) (Signal-responsive protein 2)
ruditapes_c8281	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Calmodulin-binding transcription activator 1 (Ethylene-induced calmodulin-binding protein b) (EICBP.b) (Signal-responsive protein 2)
ruditapes_c8281	response to stress	stress response	P	Calmodulin-binding transcription activator 1 (Ethylene-induced calmodulin-binding protein b) (EICBP.b) (Signal-responsive protein 2)
ruditapes_c4300	oxidation reduction	other metabolic processes	P	"Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic (G6PD2) (G6PDH2) (EC 1.1.1.49)"
ruditapes_c4300	"pentose-phosphate shunt, oxidative branch"	other metabolic processes	P	"Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic (G6PD2) (G6PDH2) (EC 1.1.1.49)"
ruditapes_c4300	glucose metabolic process	other metabolic processes	P	"Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic (G6PD2) (G6PDH2) (EC 1.1.1.49)"
ruditapes_c4300	carbohydrate metabolic process	other metabolic processes	P	"Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic (G6PD2) (G6PDH2) (EC 1.1.1.49)"
ruditapes2_lrc4605	response to cold	stress response	P	Probable calcium-binding protein CML25 (Calmodulin-like protein 25)
ruditapes_lrc32422	root hair elongation	developmental processes	P	Probable calcium-binding protein CML25 (Calmodulin-like protein 25)
ruditapes2_lrc4802	root hair elongation	developmental processes	P	Probable calcium-binding protein CML25 (Calmodulin-like protein 25)
ruditapes2_lrc4802	response to cold	stress response	P	Probable calcium-binding protein CML25 (Calmodulin-like protein 25)
ruditapes_lrc32422	response to cold	stress response	P	Probable calcium-binding protein CML25 (Calmodulin-like protein 25)
ruditapes2_lrc4605	root hair elongation	developmental processes	P	Probable calcium-binding protein CML25 (Calmodulin-like protein 25)
ruditapes2_c164	chloroplast organization	cell organization and biogenesis	P	"ALBINO3-like protein 1, chloroplastic (Arabidopsis thaliana envelope membrane integrase) (Protein ALBINA 4) (Ath4) (Protein ARTEMIS)"
ruditapes2_c164	protein insertion into membrane	cell organization and biogenesis	P	"ALBINO3-like protein 1, chloroplastic (Arabidopsis thaliana envelope membrane integrase) (Protein ALBINA 4) (Ath4) (Protein ARTEMIS)"
ruditapes_c1131	gibberellin catabolic process	other metabolic processes	P	Gibberellin 2-beta-dioxygenase 6 (EC 1.14.11.13) (GA 2-oxidase 6) (Gibberellin 2-beta-hydroxylase 6) (Gibberellin 2-oxidase 6)
ruditapes_c1131	antibiotic biosynthetic process	other metabolic processes	P	Gibberellin 2-beta-dioxygenase 6 (EC 1.14.11.13) (GA 2-oxidase 6) (Gibberellin 2-beta-hydroxylase 6) (Gibberellin 2-oxidase 6)
ruditapes_c1131	oxidation reduction	other metabolic processes	P	Gibberellin 2-beta-dioxygenase 6 (EC 1.14.11.13) (GA 2-oxidase 6) (Gibberellin 2-beta-hydroxylase 6) (Gibberellin 2-oxidase 6)
ruditapes_c1131	response to red or far red light	other biological processes	P	Gibberellin 2-beta-dioxygenase 6 (EC 1.14.11.13) (GA 2-oxidase 6) (Gibberellin 2-beta-hydroxylase 6) (Gibberellin 2-oxidase 6)
ruditapes_c11997	phosphorylation	other metabolic processes	P	Probable LRR receptor-like serine/threonine-protein kinase At1g51810 (EC 2.7.11.1)
ruditapes_c11997	protein amino acid phosphorylation	protein metabolism	P	Probable LRR receptor-like serine/threonine-protein kinase At1g51810 (EC 2.7.11.1)
ruditapes_lrc38438	biological_process	other biological processes	P	Putative F-box protein At1g47765
ruditapes2_c895	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes2_c895	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes2_c895	respiratory electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes2_c895	transport	transport	P	Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
ruditapes_c18896	ammonium transport	transport	P	Ammonium transporter Rh type A (Erythrocyte membrane glycoprotein Rh50) (Rhesus blood group family type A glycoprotein) (Rh family type A glycoprotein) (Rh type A glycoprotein) (CD antigen CD241)
ruditapes_c18896	cellular ion homeostasis	other biological processes	P	Ammonium transporter Rh type A (Erythrocyte membrane glycoprotein Rh50) (Rhesus blood group family type A glycoprotein) (Rh family type A glycoprotein) (Rh type A glycoprotein) (CD antigen CD241)
ruditapes_c18896	transport	transport	P	Ammonium transporter Rh type A (Erythrocyte membrane glycoprotein Rh50) (Rhesus blood group family type A glycoprotein) (Rh family type A glycoprotein) (Rh type A glycoprotein) (CD antigen CD241)
ruditapes_lrc33818	"fructose 1,6-bisphosphate metabolic process"	other metabolic processes	P	Fructose-bisphosphate aldolase C (EC 4.1.2.13) (Brain-type aldolase)
ruditapes_lrc33818	glycolysis	other metabolic processes	P	Fructose-bisphosphate aldolase C (EC 4.1.2.13) (Brain-type aldolase)
ruditapes_c14612	oxidation reduction	other metabolic processes	P	Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH-dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (Peroxisomal short-chain alcohol dehydrogenase) (PSCD) (rabNRDR) (Fragment)
ruditapes_c14612	retinal metabolic process	other metabolic processes	P	Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH-dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (Peroxisomal short-chain alcohol dehydrogenase) (PSCD) (rabNRDR) (Fragment)
ruditapes_c14612	metabolic process	other metabolic processes	P	Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (NADPH-dependent carbonyl reductase/NADP-retinol dehydrogenase) (CR) (PHCR) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (Peroxisomal short-chain alcohol dehydrogenase) (PSCD) (rabNRDR) (Fragment)
ruditapes_s34133	muscle organ development	developmental processes	P	Junctophilin-1 (JP-1) (Junctophilin type 1) (Mitsugumin-72) (Mg72)
ruditapes_lrc23829	single fertilization	other biological processes	P	Epididymal sperm-binding protein 1 (CeE12) (E12a) (Epididymal secretory protein 12)
ruditapes_c11783	peptidyl-glutamic acid carboxylation	protein metabolism	P	Vitamin K-dependent gamma-carboxylase (EC 4.1.1.90) (Gamma-glutamyl carboxylase) (Peptidyl-glutamate 4-carboxylase) (Vitamin K gamma glutamyl carboxylase)
ruditapes_s40000	osteoblast development	developmental processes	P	C-type lectin domain family 5 member A (C-type lectin superfamily member 5) (Myeloid DAP12-associating lectin 1) (MDL-1)
ruditapes_s40000	anti-apoptosis	death	P	C-type lectin domain family 5 member A (C-type lectin superfamily member 5) (Myeloid DAP12-associating lectin 1) (MDL-1)
ruditapes_c12847	sarcomere organization	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	sarcomere organization	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	positive regulation of satellite cell activation involved in skeletal muscle regeneration	stress response	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	protein complex assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	negative regulation of apoptosis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	autolysis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	sarcomere organization	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	sarcomere organization	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	protein complex assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	positive regulation of proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	myofibril assembly	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	myofibril assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	response to calcium ion	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	response to calcium ion	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	myofibril assembly	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	myofibril assembly	cell organization and biogenesis	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	response to muscle activity	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	response to muscle activity	other biological processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	negative regulation of apoptosis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	autolysis	death	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	positive regulation of satellite cell activation involved in skeletal muscle regeneration	stress response	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	positive regulation of satellite cell activation involved in skeletal muscle regeneration	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	positive regulation of satellite cell activation involved in skeletal muscle regeneration	developmental processes	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	positive regulation of release of sequestered calcium ion into cytosol	transport	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c4482	positive regulation of proteolysis	protein metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c12847	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Cn94) (Muscle-specific calcium-activated neutral protease 3)
ruditapes_c15355	positive regulation of cAMP biosynthetic process	other metabolic processes	P	Melanocortin receptor 4 (MC4-R)
ruditapes_c15355	positive regulation of bone resorption	other biological processes	P	Melanocortin receptor 4 (MC4-R)
ruditapes_c15355	response to insulin stimulus	other biological processes	P	Melanocortin receptor 4 (MC4-R)
ruditapes_c15355	insulin secretion	transport	P	Melanocortin receptor 4 (MC4-R)
ruditapes_c15355	insulin secretion	cell-cell signaling	P	Melanocortin receptor 4 (MC4-R)
ruditapes_c15355	signal transduction	signal transduction	P	Melanocortin receptor 4 (MC4-R)
ruditapes_c15355	G-protein coupled receptor protein signaling pathway	signal transduction	P	Melanocortin receptor 4 (MC4-R)
ruditapes_c15355	feeding behavior	other biological processes	P	Melanocortin receptor 4 (MC4-R)
ruditapes_c15355	regulation of metabolic process	other metabolic processes	P	Melanocortin receptor 4 (MC4-R)
ruditapes_c28887	platelet activation	stress response	P	Coagulation factor V (Activated protein C cofactor) [Cleaved into: Coagulation factor V heavy chain; Coagulation factor V light chain]
ruditapes_c28887	cell adhesion	cell adhesion	P	Coagulation factor V (Activated protein C cofactor) [Cleaved into: Coagulation factor V heavy chain; Coagulation factor V light chain]
ruditapes_c28887	blood coagulation	stress response	P	Coagulation factor V (Activated protein C cofactor) [Cleaved into: Coagulation factor V heavy chain; Coagulation factor V light chain]
ruditapes2_lrc6676	signal transduction	signal transduction	P	Duffy antigen/chemokine receptor (CD antigen CD234)
ruditapes2_lrc6676	G-protein coupled receptor protein signaling pathway	signal transduction	P	Duffy antigen/chemokine receptor (CD antigen CD234)
ruditapes_c26589	transport	transport	P	Toxin CaTX-A (Toxin A) (CAT-1)
ruditapes_c26589	ion transport	transport	P	Toxin CaTX-A (Toxin A) (CAT-1)
ruditapes_c26589	cytolysis	death	P	Toxin CaTX-A (Toxin A) (CAT-1)
ruditapes2_c703	glycolysis	other metabolic processes	P	Fructose-bisphosphate aldolase (EC 4.1.2.13)
ruditapes_lrc33947	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Activating transcription factor of chaperone
ruditapes_lrc33947	response to unfolded protein	stress response	P	Activating transcription factor of chaperone
ruditapes_lrc33947	"transcription, DNA-dependent"	RNA metabolism	P	Activating transcription factor of chaperone
ruditapes2_c142	translation	protein metabolism	P	40S ribosomal protein S23
ruditapes_c21481	transport	transport	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c8502	ATP catabolic process	other metabolic processes	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c8502	transport	transport	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c8502	cell differentiation	other biological processes	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c21481	cell differentiation	other biological processes	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c21481	transmembrane transport	transport	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c8502	transmembrane transport	transport	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c8502	regulation of cell differentiation	other biological processes	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c21481	regulation of cell differentiation	other biological processes	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c8502	proteolysis	protein metabolism	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c21481	ATP catabolic process	other metabolic processes	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c21481	proteolysis	protein metabolism	P	Serine protease/ABC transporter B family protein tagA (EC 3.4.21.-)
ruditapes_c5363	gluconeogenesis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c5363	pentose-phosphate shunt	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c5363	metabolic process	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c5363	glycolysis	other metabolic processes	P	Triosephosphate isomerase (TIM) (EC 5.3.1.1) (Triose-phosphate isomerase)
ruditapes_c4150	autophagic cell death	death	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	salivary gland cell autophagic cell death	developmental processes	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	salivary gland cell autophagic cell death	death	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	translational frameshifting	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	positive regulation of translational termination	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	positive regulation of translational termination	cell organization and biogenesis	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	translation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	regulation of apoptosis	death	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	wing disc development	developmental processes	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	peptidyl-lysine modification to hypusine	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c4150	positive regulation of translational elongation	protein metabolism	P	Eukaryotic translation initiation factor 5A (eIF-5A)
ruditapes_c5965	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_c5965	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit H (eIF3h)
ruditapes_c29635	proteolysis	protein metabolism	P	Brain-specific serine protease 4 (BSSP-4) (EC 3.4.21.-) (Serine protease 22) (Serine protease 26) (Tryptase epsilon)
ruditapes_c28600	protein amino acid dephosphorylation	protein metabolism	P	Integrin-linked kinase-associated serine/threonine phosphatase 2C (ILKAP) (EC 3.1.3.16)
ruditapes_c28600	regulation of S phase of mitotic cell cycle	cell cycle and proliferation	P	Integrin-linked kinase-associated serine/threonine phosphatase 2C (ILKAP) (EC 3.1.3.16)
ruditapes_c28600	negative regulation of cell cycle	cell cycle and proliferation	P	Integrin-linked kinase-associated serine/threonine phosphatase 2C (ILKAP) (EC 3.1.3.16)
ruditapes_c18812	nucleocytoplasmic transport	transport	P	Nuclear speckle splicing regulatory protein 1 (Coiled-coil domain-containing protein 55) (Nuclear speckle-related protein 70) (NSrp70)
ruditapes_c18812	RNA splicing	RNA metabolism	P	Nuclear speckle splicing regulatory protein 1 (Coiled-coil domain-containing protein 55) (Nuclear speckle-related protein 70) (NSrp70)
ruditapes_c18812	"regulation of alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Nuclear speckle splicing regulatory protein 1 (Coiled-coil domain-containing protein 55) (Nuclear speckle-related protein 70) (NSrp70)
ruditapes_c18812	mRNA processing	RNA metabolism	P	Nuclear speckle splicing regulatory protein 1 (Coiled-coil domain-containing protein 55) (Nuclear speckle-related protein 70) (NSrp70)
ruditapes_c18812	developmental process	other biological processes	P	Nuclear speckle splicing regulatory protein 1 (Coiled-coil domain-containing protein 55) (Nuclear speckle-related protein 70) (NSrp70)
ruditapes_c22977	autophagy	other metabolic processes	P	Ubiquitin-like-conjugating enzyme ATG10 (EC 6.3.2.-) (Autophagy-related protein 10) (APG10-like)
ruditapes_c22977	protein amino acid lipidation	protein metabolism	P	Ubiquitin-like-conjugating enzyme ATG10 (EC 6.3.2.-) (Autophagy-related protein 10) (APG10-like)
ruditapes_c22977	transport	transport	P	Ubiquitin-like-conjugating enzyme ATG10 (EC 6.3.2.-) (Autophagy-related protein 10) (APG10-like)
ruditapes_c22977	autophagy in response to ER overload	stress response	P	Ubiquitin-like-conjugating enzyme ATG10 (EC 6.3.2.-) (Autophagy-related protein 10) (APG10-like)
ruditapes_c22977	autophagy in response to ER overload	other metabolic processes	P	Ubiquitin-like-conjugating enzyme ATG10 (EC 6.3.2.-) (Autophagy-related protein 10) (APG10-like)
ruditapes_c22977	positive regulation of protein modification process	protein metabolism	P	Ubiquitin-like-conjugating enzyme ATG10 (EC 6.3.2.-) (Autophagy-related protein 10) (APG10-like)
ruditapes_c22977	protein transport	transport	P	Ubiquitin-like-conjugating enzyme ATG10 (EC 6.3.2.-) (Autophagy-related protein 10) (APG10-like)
ruditapes_c22977	protein modification by small protein conjugation	protein metabolism	P	Ubiquitin-like-conjugating enzyme ATG10 (EC 6.3.2.-) (Autophagy-related protein 10) (APG10-like)
ruditapes_c22977	autophagy in response to ER overload	signal transduction	P	Ubiquitin-like-conjugating enzyme ATG10 (EC 6.3.2.-) (Autophagy-related protein 10) (APG10-like)
ruditapes2_c2806	mRNA processing	RNA metabolism	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	regulation of RNA splicing	RNA metabolism	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	RNA splicing	RNA metabolism	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	"DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator"	signal transduction	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	"DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator"	stress response	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	negative regulation of cell proliferation	cell cycle and proliferation	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	regulation of myotube differentiation	developmental processes	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	cell cycle	cell cycle and proliferation	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	cell cycle arrest	cell cycle and proliferation	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c2806	cell differentiation	other biological processes	P	RNA-binding protein 38 (CLL-associated antigen KW-5) (HSRNASEB) (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
ruditapes2_c3934	transmembrane transport	transport	P	Transient receptor potential cation channel subfamily V member 6 (TrpV6) (CaT-like) (CaT-L) (Calcium transport protein 1) (CaT1) (Epithelial calcium channel 2) (ECaC2)
ruditapes2_c3934	transmembrane calcium ion transport	transport	P	Transient receptor potential cation channel subfamily V member 6 (TrpV6) (CaT-like) (CaT-L) (Calcium transport protein 1) (CaT1) (Epithelial calcium channel 2) (ECaC2)
ruditapes2_c3934	regulation of calcium ion-dependent exocytosis	transport	P	Transient receptor potential cation channel subfamily V member 6 (TrpV6) (CaT-like) (CaT-L) (Calcium transport protein 1) (CaT1) (Epithelial calcium channel 2) (ECaC2)
ruditapes2_c3934	transport	transport	P	Transient receptor potential cation channel subfamily V member 6 (TrpV6) (CaT-like) (CaT-L) (Calcium transport protein 1) (CaT1) (Epithelial calcium channel 2) (ECaC2)
ruditapes2_c3934	calcium ion transport	transport	P	Transient receptor potential cation channel subfamily V member 6 (TrpV6) (CaT-like) (CaT-L) (Calcium transport protein 1) (CaT1) (Epithelial calcium channel 2) (ECaC2)
ruditapes2_c3934	ion transport	transport	P	Transient receptor potential cation channel subfamily V member 6 (TrpV6) (CaT-like) (CaT-L) (Calcium transport protein 1) (CaT1) (Epithelial calcium channel 2) (ECaC2)
ruditapes_c10251	cilium axoneme assembly	cell organization and biogenesis	P	Radial spoke head protein 9 homolog
ruditapes_c8239	transmembrane transport	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	response to drug	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	lipid metabolic process	other metabolic processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	intestinal cholesterol absorption	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	excretion	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	transport	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	cholesterol efflux	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	cholesterol homeostasis	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	negative regulation of intestinal cholesterol absorption	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	transport	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	negative regulation of intestinal phytosterol absorption	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	negative regulation of intestinal cholesterol absorption	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	response to drug	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	excretion	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	cholesterol efflux	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	sterol transport	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	response to nutrient	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	intestinal cholesterol absorption	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	lipid metabolic process	other metabolic processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	response to nutrient	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	transmembrane transport	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	negative regulation of intestinal phytosterol absorption	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	cholesterol efflux	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	cholesterol homeostasis	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	negative regulation of intestinal phytosterol absorption	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	response to ionizing radiation	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	negative regulation of intestinal cholesterol absorption	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	cholesterol homeostasis	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	intestinal cholesterol absorption	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	sterol transport	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	excretion	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	sterol transport	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	response to ionizing radiation	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	response to ionizing radiation	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	transport	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	lipid metabolic process	other metabolic processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8239	response to drug	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c8264	response to nutrient	other biological processes	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_c15813	transmembrane transport	transport	P	ATP-binding cassette sub-family G member 5 (Sterolin-1)
ruditapes_s37746	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Potassium voltage-gated channel subfamily H member 6 (Ether-a-go-go-related gene potassium channel 2) (ERG-2) (Eag-related protein 2) (Ether-a-go-go-related protein 2) (hERG-2) (hERG2) (Voltage-gated potassium channel subunit Kv11.2)
ruditapes_s37746	transmembrane transport	transport	P	Potassium voltage-gated channel subfamily H member 6 (Ether-a-go-go-related gene potassium channel 2) (ERG-2) (Eag-related protein 2) (Ether-a-go-go-related protein 2) (hERG-2) (hERG2) (Voltage-gated potassium channel subunit Kv11.2)
ruditapes_s37746	ion transport	transport	P	Potassium voltage-gated channel subfamily H member 6 (Ether-a-go-go-related gene potassium channel 2) (ERG-2) (Eag-related protein 2) (Ether-a-go-go-related protein 2) (hERG-2) (hERG2) (Voltage-gated potassium channel subunit Kv11.2)
ruditapes_s37746	protein heterooligomerization	cell organization and biogenesis	P	Potassium voltage-gated channel subfamily H member 6 (Ether-a-go-go-related gene potassium channel 2) (ERG-2) (Eag-related protein 2) (Ether-a-go-go-related protein 2) (hERG-2) (hERG2) (Voltage-gated potassium channel subunit Kv11.2)
ruditapes_s37746	synaptic transmission	cell-cell signaling	P	Potassium voltage-gated channel subfamily H member 6 (Ether-a-go-go-related gene potassium channel 2) (ERG-2) (Eag-related protein 2) (Ether-a-go-go-related protein 2) (hERG-2) (hERG2) (Voltage-gated potassium channel subunit Kv11.2)
ruditapes_s37746	potassium ion transport	transport	P	Potassium voltage-gated channel subfamily H member 6 (Ether-a-go-go-related gene potassium channel 2) (ERG-2) (Eag-related protein 2) (Ether-a-go-go-related protein 2) (hERG-2) (hERG2) (Voltage-gated potassium channel subunit Kv11.2)
ruditapes_s37746	regulation of transmembrane ion transport	transport	P	Potassium voltage-gated channel subfamily H member 6 (Ether-a-go-go-related gene potassium channel 2) (ERG-2) (Eag-related protein 2) (Ether-a-go-go-related protein 2) (hERG-2) (hERG2) (Voltage-gated potassium channel subunit Kv11.2)
ruditapes_s37746	signal transduction	signal transduction	P	Potassium voltage-gated channel subfamily H member 6 (Ether-a-go-go-related gene potassium channel 2) (ERG-2) (Eag-related protein 2) (Ether-a-go-go-related protein 2) (hERG-2) (hERG2) (Voltage-gated potassium channel subunit Kv11.2)
ruditapes_s37746	transport	transport	P	Potassium voltage-gated channel subfamily H member 6 (Ether-a-go-go-related gene potassium channel 2) (ERG-2) (Eag-related protein 2) (Ether-a-go-go-related protein 2) (hERG-2) (hERG2) (Voltage-gated potassium channel subunit Kv11.2)
ruditapes_c16567	transport	transport	P	Vacuolar protein sorting-associated protein 11 homolog (hVPS11) (RING finger protein 108)
ruditapes_c16567	protein transport	transport	P	Vacuolar protein sorting-associated protein 11 homolog (hVPS11) (RING finger protein 108)
ruditapes_c16567	vesicle-mediated transport	transport	P	Vacuolar protein sorting-associated protein 11 homolog (hVPS11) (RING finger protein 108)
ruditapes_c16567	intracellular protein transport	transport	P	Vacuolar protein sorting-associated protein 11 homolog (hVPS11) (RING finger protein 108)
ruditapes_c15979	osteoclast differentiation	developmental processes	P	Dendritic cell-specific transmembrane protein (DC-STAMP) (hDC-STAMP) (Dendrocyte-expressed seven transmembrane protein) (IL-four-induced protein) (FIND) (Transmembrane 7 superfamily member 4)
ruditapes_c16165	osteoclast differentiation	developmental processes	P	Dendritic cell-specific transmembrane protein (DC-STAMP) (hDC-STAMP) (Dendrocyte-expressed seven transmembrane protein) (IL-four-induced protein) (FIND) (Transmembrane 7 superfamily member 4)
ruditapes_lrc29430	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	regulation of growth	other biological processes	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	histone H2A acetylation	protein metabolism	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	histone H2A acetylation	cell organization and biogenesis	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	"negative regulation of gene expression, epigenetic"	other metabolic processes	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	chromatin modification	cell organization and biogenesis	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	"transcription, DNA-dependent"	RNA metabolism	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	histone H4 acetylation	protein metabolism	P	Enhancer of polycomb homolog 1
ruditapes_lrc29430	histone H4 acetylation	cell organization and biogenesis	P	Enhancer of polycomb homolog 1
ruditapes_c21947	methylation	other metabolic processes	P	S-methylmethionine--homocysteine S-methyltransferase BHMT2 (SMM-hcy methyltransferase) (EC 2.1.1.5) (Betaine--homocysteine S-methyltransferase 2)
ruditapes_c21947	methionine biosynthetic process	other metabolic processes	P	S-methylmethionine--homocysteine S-methyltransferase BHMT2 (SMM-hcy methyltransferase) (EC 2.1.1.5) (Betaine--homocysteine S-methyltransferase 2)
ruditapes_c14473	peptidyl-diphthamide biosynthetic process from peptidyl-histidine	protein metabolism	P	Diphthine synthase (EC 2.1.1.98) (Diphthamide biosynthesis methyltransferase)
ruditapes_c14473	methylation	other metabolic processes	P	Diphthine synthase (EC 2.1.1.98) (Diphthamide biosynthesis methyltransferase)
ruditapes_c14473	metabolic process	other metabolic processes	P	Diphthine synthase (EC 2.1.1.98) (Diphthamide biosynthesis methyltransferase)
ruditapes_c21659	mRNA metabolic process	RNA metabolism	P	Polyadenylate-binding protein 3 (PABP-3) (Poly(A)-binding protein 3) (Testis-specific poly(A)-binding protein)
ruditapes2_c346	biological_process	other biological processes	P	Growth hormone-inducible transmembrane protein (Dermal papilla-derived protein 2) (Mitochondrial morphology and cristae structure 1) (MICS1) (Transmembrane BAX inhibitor motif-containing protein 5)
ruditapes2_c346	apoptosis	death	P	Growth hormone-inducible transmembrane protein (Dermal papilla-derived protein 2) (Mitochondrial morphology and cristae structure 1) (MICS1) (Transmembrane BAX inhibitor motif-containing protein 5)
ruditapes2_c1151	ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc37234	regulation of transmembrane ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_c5056	transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc37234	ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc34709	transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes2_c1151	regulation of transmembrane ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes2_c1151	synaptic transmission	cell-cell signaling	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_c5056	synaptic transmission	cell-cell signaling	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc34709	ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc37234	synaptic transmission	cell-cell signaling	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_c5056	ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc34709	regulation of transmembrane ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes2_c1151	potassium ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes2_c1151	transmembrane transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc37234	potassium ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_c5056	regulation of transmembrane ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc34709	transmembrane transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc37234	transmembrane transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc34709	potassium ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc37234	transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_lrc34709	synaptic transmission	cell-cell signaling	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_c5056	potassium ion transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes2_c1151	transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_c5056	transmembrane transport	transport	P	Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1)
ruditapes_c15167	D-ribose metabolic process	other metabolic processes	P	Ribokinase (EC 2.7.1.15)
ruditapes_c15167	carbohydrate metabolic process	other metabolic processes	P	Ribokinase (EC 2.7.1.15)
ruditapes_c15167	phosphorylation	other metabolic processes	P	Ribokinase (EC 2.7.1.15)
ruditapes_c3979	limb development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c13913	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_lrc38239	cell differentiation	other biological processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c13913	cell differentiation	other biological processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_s34788	limb development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c416	eye development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes2_lrc5911	cell differentiation	other biological processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c13913	limb development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_s34788	regulation of osteoblast differentiation	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c416	regulation of osteoblast differentiation	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_s34788	cell differentiation	other biological processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_lrc38239	eye development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c22112	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes2_lrc5911	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c22112	cell differentiation	other biological processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_s34788	multicellular organismal development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c13913	eye development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c3979	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_lrc38239	limb development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_s34788	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_lrc38239	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c416	multicellular organismal development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c22112	limb development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c3979	cell differentiation	other biological processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c416	limb development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c416	cell differentiation	other biological processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_lrc38239	regulation of osteoblast differentiation	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c13913	regulation of osteoblast differentiation	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c3979	eye development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes2_lrc5911	eye development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c13913	multicellular organismal development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes2_lrc5911	regulation of osteoblast differentiation	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c22112	multicellular organismal development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes2_lrc5911	limb development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c416	signal transduction	signal transduction	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c22112	eye development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c3979	multicellular organismal development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes2_lrc5911	multicellular organismal development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_s34788	eye development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_lrc38239	multicellular organismal development	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c3979	regulation of osteoblast differentiation	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c22112	regulation of osteoblast differentiation	developmental processes	P	SPARC-related modular calcium-binding protein 1 (Secreted modular calcium-binding protein 1) (SMOC-1)
ruditapes_c17504	"transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 12 (PR domain-containing protein 12)
ruditapes_c17504	neurogenesis	developmental processes	P	PR domain zinc finger protein 12 (PR domain-containing protein 12)
ruditapes_c17504	"regulation of transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 12 (PR domain-containing protein 12)
ruditapes_c3966	rRNA processing	RNA metabolism	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c3966	"transcription, DNA-dependent"	RNA metabolism	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c3966	rRNA methylation	RNA metabolism	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c3966	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c3966	gene expression	other metabolic processes	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c3966	transcription initiation from mitochondrial promoter	RNA metabolism	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c3966	transcription initiation from mitochondrial promoter	cell organization and biogenesis	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c3966	methylation	other metabolic processes	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c3966	rRNA modification	RNA metabolism	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c3966	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c3966	transcription from mitochondrial promoter	RNA metabolism	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c3966	transcription from mitochondrial promoter	cell organization and biogenesis	P	"Dimethyladenosine transferase 2, mitochondrial (EC 2.1.1.-) (Hepatitis C virus NS5A-transactivated protein 5) (HCV NS5A-transactivated protein 5) (Mitochondrial 12S rRNA dimethylase 2) (Mitochondrial transcription factor B2) (h-mtTFB) (h-mtTFB2) (hTFB2M) (mtTFB2) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 2)"
ruditapes_c14330	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Probable ATP-dependent RNA helicase DHX35 (EC 3.6.4.13) (DEAH box protein 35)
ruditapes_c14330	mRNA processing	RNA metabolism	P	Probable ATP-dependent RNA helicase DHX35 (EC 3.6.4.13) (DEAH box protein 35)
ruditapes_c14330	RNA splicing	RNA metabolism	P	Probable ATP-dependent RNA helicase DHX35 (EC 3.6.4.13) (DEAH box protein 35)
ruditapes_s39699	cation transport	transport	P	Probable cation-transporting ATPase 13A3 (EC 3.6.3.-) (ATPase family homolog up-regulated in senescence cells 1)
ruditapes_s39699	ATP catabolic process	other metabolic processes	P	Probable cation-transporting ATPase 13A3 (EC 3.6.3.-) (ATPase family homolog up-regulated in senescence cells 1)
ruditapes_c8047	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	peptidyl-lysine dimethylation	protein metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	peptidyl-lysine monomethylation	protein metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	embryonic development	developmental processes	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	histone H3-K9 methylation	protein metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	histone H3-K9 methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	peptidyl-lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	histone methylation	protein metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	histone methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c8047	DNA methylation	DNA metabolism	P	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)
ruditapes_c13975	transcription from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c13975	gene expression	other metabolic processes	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	nucleologenesis	cell organization and biogenesis	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c13975	embryonic development	developmental processes	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	transcription initiation from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	transcription initiation from RNA polymerase I promoter	cell organization and biogenesis	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	RNA elongation from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c13975	nucleologenesis	cell organization and biogenesis	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c13975	termination of RNA polymerase I transcription	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c13975	termination of RNA polymerase I transcription	cell organization and biogenesis	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	rRNA transcription	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	embryonic development	developmental processes	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	termination of RNA polymerase I transcription	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	termination of RNA polymerase I transcription	cell organization and biogenesis	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c13975	transcription initiation from RNA polymerase I promoter	cell organization and biogenesis	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	embryo implantation	developmental processes	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	gene expression	other metabolic processes	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	transcription from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c13975	transcription initiation from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	gene expression	other metabolic processes	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	RNA elongation from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	rRNA transcription	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c13975	embryo implantation	developmental processes	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c13975	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	embryonic development	developmental processes	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	termination of RNA polymerase I transcription	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	termination of RNA polymerase I transcription	cell organization and biogenesis	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	embryo implantation	developmental processes	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c29268	transcription from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	transcription initiation from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	transcription initiation from RNA polymerase I promoter	cell organization and biogenesis	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c13975	rRNA transcription	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c13975	RNA elongation from RNA polymerase I promoter	RNA metabolism	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_c31886	nucleologenesis	cell organization and biogenesis	P	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135)
ruditapes_lrc15592	cell surface receptor linked signal transduction	signal transduction	P	Latrophilin-3 (Calcium-independent alpha-latrotoxin receptor 3) (CIRL-3) (Lectomedin-3)
ruditapes_lrc15592	G-protein coupled receptor protein signaling pathway	signal transduction	P	Latrophilin-3 (Calcium-independent alpha-latrotoxin receptor 3) (CIRL-3) (Lectomedin-3)
ruditapes_lrc9074	signal transduction	signal transduction	P	Latrophilin-3 (Calcium-independent alpha-latrotoxin receptor 3) (CIRL-3) (Lectomedin-3)
ruditapes_lrc9074	cell surface receptor linked signal transduction	signal transduction	P	Latrophilin-3 (Calcium-independent alpha-latrotoxin receptor 3) (CIRL-3) (Lectomedin-3)
ruditapes_lrc15592	signal transduction	signal transduction	P	Latrophilin-3 (Calcium-independent alpha-latrotoxin receptor 3) (CIRL-3) (Lectomedin-3)
ruditapes_lrc9074	G-protein coupled receptor protein signaling pathway	signal transduction	P	Latrophilin-3 (Calcium-independent alpha-latrotoxin receptor 3) (CIRL-3) (Lectomedin-3)
ruditapes_lrc15592	neuropeptide signaling pathway	signal transduction	P	Latrophilin-3 (Calcium-independent alpha-latrotoxin receptor 3) (CIRL-3) (Lectomedin-3)
ruditapes_lrc9074	neuropeptide signaling pathway	signal transduction	P	Latrophilin-3 (Calcium-independent alpha-latrotoxin receptor 3) (CIRL-3) (Lectomedin-3)
ruditapes_c15072	pyrimidine nucleoside transport	transport	P	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (hCNT3)
ruditapes_c15072	pyrimidine transport	transport	P	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (hCNT3)
ruditapes_c15072	transmembrane transport	transport	P	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (hCNT3)
ruditapes_c15072	retina homeostasis	other biological processes	P	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (hCNT3)
ruditapes_c15072	purine nucleoside transport	transport	P	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (hCNT3)
ruditapes_c15072	purine transport	transport	P	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (hCNT3)
ruditapes_c15072	transport	transport	P	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (hCNT3)
ruditapes_c29040	retinoic acid metabolic process	other metabolic processes	P	UDP-glucuronosyltransferase 1-7 (UDPGT 1-7) (UGT1*7) (UGT1-07) (UGT1.7) (EC 2.4.1.17) (UDP-glucuronosyltransferase 1-G) (UGT-1G) (UGT1G) (UDP-glucuronosyltransferase 1A7)
ruditapes_c29040	drug metabolic process	other metabolic processes	P	UDP-glucuronosyltransferase 1-7 (UDPGT 1-7) (UGT1*7) (UGT1-07) (UGT1.7) (EC 2.4.1.17) (UDP-glucuronosyltransferase 1-G) (UGT-1G) (UGT1G) (UDP-glucuronosyltransferase 1A7)
ruditapes_c29040	flavone metabolic process	other metabolic processes	P	UDP-glucuronosyltransferase 1-7 (UDPGT 1-7) (UGT1*7) (UGT1-07) (UGT1.7) (EC 2.4.1.17) (UDP-glucuronosyltransferase 1-G) (UGT-1G) (UGT1G) (UDP-glucuronosyltransferase 1A7)
ruditapes_c29040	excretion	transport	P	UDP-glucuronosyltransferase 1-7 (UDPGT 1-7) (UGT1*7) (UGT1-07) (UGT1.7) (EC 2.4.1.17) (UDP-glucuronosyltransferase 1-G) (UGT-1G) (UGT1G) (UDP-glucuronosyltransferase 1A7)
ruditapes_c29040	negative regulation of fatty acid metabolic process	other metabolic processes	P	UDP-glucuronosyltransferase 1-7 (UDPGT 1-7) (UGT1*7) (UGT1-07) (UGT1.7) (EC 2.4.1.17) (UDP-glucuronosyltransferase 1-G) (UGT-1G) (UGT1G) (UDP-glucuronosyltransferase 1A7)
ruditapes_c29040	negative regulation of catalytic activity	other biological processes	P	UDP-glucuronosyltransferase 1-7 (UDPGT 1-7) (UGT1*7) (UGT1-07) (UGT1.7) (EC 2.4.1.17) (UDP-glucuronosyltransferase 1-G) (UGT-1G) (UGT1G) (UDP-glucuronosyltransferase 1A7)
ruditapes_c29040	coumarin metabolic process	other metabolic processes	P	UDP-glucuronosyltransferase 1-7 (UDPGT 1-7) (UGT1*7) (UGT1-07) (UGT1.7) (EC 2.4.1.17) (UDP-glucuronosyltransferase 1-G) (UGT-1G) (UGT1G) (UDP-glucuronosyltransferase 1A7)
ruditapes_c29040	metabolic process	other metabolic processes	P	UDP-glucuronosyltransferase 1-7 (UDPGT 1-7) (UGT1*7) (UGT1-07) (UGT1.7) (EC 2.4.1.17) (UDP-glucuronosyltransferase 1-G) (UGT-1G) (UGT1G) (UDP-glucuronosyltransferase 1A7)
ruditapes_c20826	DNA repair	stress response	P	Fanconi anemia group E protein (Protein FACE)
ruditapes_c20826	DNA repair	DNA metabolism	P	Fanconi anemia group E protein (Protein FACE)
ruditapes_c20826	response to DNA damage stimulus	stress response	P	Fanconi anemia group E protein (Protein FACE)
ruditapes_c16037	proton transport	transport	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c16037	ion transport	transport	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c16037	excretion	transport	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c16037	transport	transport	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c16037	ossification	developmental processes	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c16037	regulation of pH	other biological processes	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c16037	insulin receptor signaling pathway	signal transduction	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c16037	sensory perception of sound	other biological processes	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c16037	cellular iron ion homeostasis	other biological processes	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c16037	transmembrane transport	transport	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c16037	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c16037	transferrin transport	transport	P	V-type proton ATPase 116 kDa subunit a isoform 4 (V-ATPase 116 kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform)
ruditapes_c15957	metabolic process	other metabolic processes	P	Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol dehydrogenase PAN2)
ruditapes_c15957	oxidation reduction	other metabolic processes	P	Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol dehydrogenase PAN2)
ruditapes_c11282	oxidation reduction	other metabolic processes	P	Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol dehydrogenase PAN2)
ruditapes_c11282	metabolic process	other metabolic processes	P	Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol dehydrogenase PAN2)
ruditapes_c21450	viral reproduction	other biological processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	metabolic process	other metabolic processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	negative regulation of retroviral genome replication	other biological processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	DNA cytosine deamination	DNA metabolism	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	interspecies interaction between organisms	other biological processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	negative regulation of viral reproduction	other biological processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	negative regulation of viral genome replication	other biological processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	cytidine deamination	other metabolic processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	innate immune response	stress response	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	base conversion or substitution editing	RNA metabolism	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	negative regulation of transposition	other biological processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	response to virus	other biological processes	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c21450	positive regulation of defense response to virus by host	stress response	P	DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.14) (APOBEC-related cytidine deaminase) (APOBEC-related protein) (ARCD) (APOBEC-related protein 9) (ARP-9) (CEM-15) (CEM15) (Deoxycytidine deaminase) (A3G)
ruditapes_c17969	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 20 (Dendritic-derived BTB/POZ zinc finger protein) (Zinc finger protein 288)
ruditapes_c17969	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 20 (Dendritic-derived BTB/POZ zinc finger protein) (Zinc finger protein 288)
ruditapes_c10586	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 532
ruditapes_c10586	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 532
ruditapes_c28491	intracellular protein transport	transport	P	Synaptotagmin-like protein 2 (Breast cancer-associated antigen SGA-72M) (Exophilin-4)
ruditapes_c28491	negative regulation of phosphatase activity	other metabolic processes	P	Synaptotagmin-like protein 2 (Breast cancer-associated antigen SGA-72M) (Exophilin-4)
ruditapes_c28491	vesicle docking during exocytosis	transport	P	Synaptotagmin-like protein 2 (Breast cancer-associated antigen SGA-72M) (Exophilin-4)
ruditapes_c28491	vesicle-mediated transport	transport	P	Synaptotagmin-like protein 2 (Breast cancer-associated antigen SGA-72M) (Exophilin-4)
ruditapes_c28491	exocytosis	transport	P	Synaptotagmin-like protein 2 (Breast cancer-associated antigen SGA-72M) (Exophilin-4)
ruditapes_c12454	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 26 (Zinc finger protein 481) (Zinc finger protein Bioref)
ruditapes_c12454	biological_process	other biological processes	P	Zinc finger and BTB domain-containing protein 26 (Zinc finger protein 481) (Zinc finger protein Bioref)
ruditapes_c12454	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger and BTB domain-containing protein 26 (Zinc finger protein 481) (Zinc finger protein Bioref)
ruditapes2_c109	homophilic cell adhesion	cell adhesion	P	Protocadherin-18
ruditapes2_c109	cell adhesion	cell adhesion	P	Protocadherin-18
ruditapes2_c109	brain development	developmental processes	P	Protocadherin-18
ruditapes_c5510	cAMP catabolic process	other metabolic processes	P	"Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A (EC 3.1.4.17) (EC 3.1.4.35) (cAMP and cGMP phosphodiesterase 11A)"
ruditapes_c5510	blood coagulation	stress response	P	"Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A (EC 3.1.4.17) (EC 3.1.4.35) (cAMP and cGMP phosphodiesterase 11A)"
ruditapes_c5510	metabolic process	other metabolic processes	P	"Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A (EC 3.1.4.17) (EC 3.1.4.35) (cAMP and cGMP phosphodiesterase 11A)"
ruditapes_c5510	cGMP catabolic process	other metabolic processes	P	"Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A (EC 3.1.4.17) (EC 3.1.4.35) (cAMP and cGMP phosphodiesterase 11A)"
ruditapes_c5510	signal transduction	signal transduction	P	"Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A (EC 3.1.4.17) (EC 3.1.4.35) (cAMP and cGMP phosphodiesterase 11A)"
ruditapes_c11656	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	post-translational protein modification	protein metabolism	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	membrane organization	cell organization and biogenesis	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	COPII coating of Golgi vesicle	transport	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	COPII coating of Golgi vesicle	cell organization and biogenesis	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	protein amino acid N-linked glycosylation via asparagine	protein metabolism	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	transport	transport	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	cellular protein metabolic process	protein metabolism	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	vesicle-mediated transport	transport	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	protein transport	transport	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	ER to Golgi vesicle-mediated transport	transport	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	"transcription, DNA-dependent"	RNA metabolism	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	endoplasmic reticulum unfolded protein response	signal transduction	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	endoplasmic reticulum unfolded protein response	stress response	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	activation of signaling protein activity involved in unfolded protein response	signal transduction	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	activation of signaling protein activity involved in unfolded protein response	stress response	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes_c11656	activation of signaling protein activity involved in unfolded protein response	other metabolic processes	P	Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12)
ruditapes2_c1540	axon guidance	developmental processes	P	Unconventional myosin-X (Unconventional myosin-10)
ruditapes2_c1540	axon guidance	cell organization and biogenesis	P	Unconventional myosin-X (Unconventional myosin-10)
ruditapes_c11862	Notch signaling pathway	signal transduction	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	neuron migration	developmental processes	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	cell differentiation	other biological processes	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	neuron development	developmental processes	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	glial cell differentiation	developmental processes	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	multicellular organismal development	developmental processes	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	neuroblast proliferation	cell cycle and proliferation	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	neuroblast proliferation	developmental processes	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	camera-type eye development	developmental processes	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	retina development in camera-type eye	developmental processes	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	positive regulation of cell differentiation	other biological processes	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	cell fate commitment	other biological processes	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	"transcription, DNA-dependent"	RNA metabolism	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c11862	nervous system development	developmental processes	P	Neurogenic differentiation factor 4 (NeuroD4) (Class A basic helix-loop-helix protein 4) (bHLHa4) (Protein atonal homolog 3) (ATH-3) (Atoh3)
ruditapes_c4810	mitosis	cell cycle and proliferation	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	mitosis	cell organization and biogenesis	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	mitotic cell cycle spindle assembly checkpoint	cell organization and biogenesis	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	attachment of spindle microtubules to mitotic chromosome	cell cycle and proliferation	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	attachment of spindle microtubules to mitotic chromosome	cell organization and biogenesis	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	chromosome segregation	other biological processes	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	mitotic cell cycle spindle assembly checkpoint	cell cycle and proliferation	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	cell division	other biological processes	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	sister chromatid biorientation	cell cycle and proliferation	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	sister chromatid biorientation	cell organization and biogenesis	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	cell cycle	cell cycle and proliferation	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	mitotic spindle organization	cell cycle and proliferation	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c4810	mitotic spindle organization	cell organization and biogenesis	P	DASH complex subunit dam1 (Outer kinetochore protein dam1)
ruditapes_c20412	"DNA replication, Okazaki fragment processing"	DNA metabolism	P	Putative ATP-dependent RNA helicase mfh2 (EC 3.6.4.13) (FancM homolog protein 2)
ruditapes_c20412	DNA repair	stress response	P	Putative ATP-dependent RNA helicase mfh2 (EC 3.6.4.13) (FancM homolog protein 2)
ruditapes_c20412	DNA repair	DNA metabolism	P	Putative ATP-dependent RNA helicase mfh2 (EC 3.6.4.13) (FancM homolog protein 2)
ruditapes2_lrc4088	transmembrane transport	transport	P	Uncharacterized MFS-type transporter C1399.02
ruditapes2_lrc4088	transport	transport	P	Uncharacterized MFS-type transporter C1399.02
ruditapes_c14683	glutathione biosynthetic process	other metabolic processes	P	Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-ECS) (GCS) (Gamma-glutamylcysteine synthetase)
ruditapes2_c970	proteolysis	protein metabolism	P	Calpain-like protease palB/RIM13 (EC 3.4.22.-) (Cysteine protease RIM13)
ruditapes_c21335	transport	transport	P	Autophagy-related protein 2 (Glucose-induced selective autophagy protein 11) (Pexophagy zeocin-resistant mutant protein 7)
ruditapes_c21335	"transcription, DNA-dependent"	RNA metabolism	P	Autophagy-related protein 2 (Glucose-induced selective autophagy protein 11) (Pexophagy zeocin-resistant mutant protein 7)
ruditapes_c21335	autophagy	other metabolic processes	P	Autophagy-related protein 2 (Glucose-induced selective autophagy protein 11) (Pexophagy zeocin-resistant mutant protein 7)
ruditapes_c21335	protein transport	transport	P	Autophagy-related protein 2 (Glucose-induced selective autophagy protein 11) (Pexophagy zeocin-resistant mutant protein 7)
ruditapes_c21335	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Autophagy-related protein 2 (Glucose-induced selective autophagy protein 11) (Pexophagy zeocin-resistant mutant protein 7)
ruditapes_s37176	glycolysis	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_s37176	glucose metabolic process	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_s37176	oxidation reduction	other metabolic processes	P	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)
ruditapes_c8748	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase)
ruditapes_c8748	RNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase)
ruditapes_c8748	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase)
ruditapes_s38074	translation	protein metabolism	P	50S ribosomal protein L6
ruditapes_c20893	response to DNA damage stimulus	stress response	P	DNA repair and recombination protein RadB
ruditapes_c20893	DNA recombination	DNA metabolism	P	DNA repair and recombination protein RadB
ruditapes_c20893	DNA metabolic process	DNA metabolism	P	DNA repair and recombination protein RadB
ruditapes_c20893	DNA repair	stress response	P	DNA repair and recombination protein RadB
ruditapes_c20893	DNA repair	DNA metabolism	P	DNA repair and recombination protein RadB
ruditapes_c24178	"pentose-phosphate shunt, non-oxidative branch"	other metabolic processes	P	Ribose-5-phosphate isomerase A (EC 5.3.1.6) (Phosphoriboisomerase A) (PRI)
ruditapes_c12662	translational elongation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_c12662	GTP catabolic process	other metabolic processes	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_c12662	translation	protein metabolism	P	Elongation factor 1-alpha (EF-1-alpha) (Elongation factor Tu) (EF-Tu)
ruditapes_c26082	intein-mediated protein splicing	protein metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Hsp-NRC1 polC intein (Hsp-NRC1 pol2 intein)]
ruditapes_c26082	metabolic process	other metabolic processes	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Hsp-NRC1 polC intein (Hsp-NRC1 pol2 intein)]
ruditapes_c26082	DNA catabolic process	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Hsp-NRC1 polC intein (Hsp-NRC1 pol2 intein)]
ruditapes_c26082	DNA replication	DNA metabolism	P	DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) [Cleaved into: Hsp-NRC1 polC intein (Hsp-NRC1 pol2 intein)]
ruditapes_c6149	DNA repair	stress response	P	Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme)
ruditapes_c6149	DNA repair	DNA metabolism	P	Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme)
ruditapes_c6149	response to DNA damage stimulus	stress response	P	Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme)
ruditapes_c6149	protein-chromophore linkage	protein metabolism	P	Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme)
ruditapes_c1502	DNA replication	DNA metabolism	P	ORC1-type DNA replication protein 2
ruditapes_c27609	biosynthetic process	other metabolic processes	P	GTP cyclohydrolase III 1 (EC 3.5.4.29)
ruditapes_c19847	protein catabolic process	protein metabolism	P	Proteasome-activating nucleotidase 1 (PAN 1) (Proteasomal ATPase 1) (Proteasome regulatory ATPase 1) (Proteasome regulatory particle 1)
ruditapes_c22763	transport	transport	P	Probable multidrug resistance protein NorM (Multidrug-efflux transporter)
ruditapes_c22763	ion transport	transport	P	Probable multidrug resistance protein NorM (Multidrug-efflux transporter)
ruditapes_c28383	transmembrane transport	transport	P	Probable multidrug resistance protein NorM (Multidrug-efflux transporter)
ruditapes_c22763	transmembrane transport	transport	P	Probable multidrug resistance protein NorM (Multidrug-efflux transporter)
ruditapes_c28383	multidrug transport	transport	P	Probable multidrug resistance protein NorM (Multidrug-efflux transporter)
ruditapes_c28383	ion transport	transport	P	Probable multidrug resistance protein NorM (Multidrug-efflux transporter)
ruditapes_c22763	multidrug transport	transport	P	Probable multidrug resistance protein NorM (Multidrug-efflux transporter)
ruditapes_c28383	transport	transport	P	Probable multidrug resistance protein NorM (Multidrug-efflux transporter)
ruditapes2_c668	cell division	other biological processes	P	Cell division protein FtsB
ruditapes2_c668	cell cycle	cell cycle and proliferation	P	Cell division protein FtsB
ruditapes2_c5832	cell division	other biological processes	P	Cell division protein FtsB
ruditapes2_c5832	cell cycle	cell cycle and proliferation	P	Cell division protein FtsB
ruditapes_c16176	pathogenesis	other biological processes	P	Phenazine biosynthesis protein PhzA 2
ruditapes_c16176	antibiotic biosynthetic process	other metabolic processes	P	Phenazine biosynthesis protein PhzA 2
ruditapes_c11892	lipid metabolic process	other metabolic processes	P	Neutral ceramidase (N-CDase) (NCDase) (EC 3.5.1.23) (Acylsphingosine deacylase) (N-acylsphingosine amidohydrolase)
ruditapes2_c5137	lipid metabolic process	other metabolic processes	P	Neutral ceramidase (N-CDase) (NCDase) (EC 3.5.1.23) (Acylsphingosine deacylase) (N-acylsphingosine amidohydrolase)
ruditapes_c33940	lipid metabolic process	other metabolic processes	P	Neutral ceramidase (N-CDase) (NCDase) (EC 3.5.1.23) (Acylsphingosine deacylase) (N-acylsphingosine amidohydrolase)
ruditapes_c27707	lipid metabolic process	other metabolic processes	P	Neutral ceramidase (N-CDase) (NCDase) (EC 3.5.1.23) (Acylsphingosine deacylase) (N-acylsphingosine amidohydrolase)
ruditapes_c33520	lipid metabolic process	other metabolic processes	P	Neutral ceramidase (N-CDase) (NCDase) (EC 3.5.1.23) (Acylsphingosine deacylase) (N-acylsphingosine amidohydrolase)
ruditapes_c19798	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon (EC 3.1.1.61)
ruditapes_c19798	two-component signal transduction system (phosphorelay)	signal transduction	P	Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon (EC 3.1.1.61)
ruditapes_c19798	chemotaxis	other biological processes	P	Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon (EC 3.1.1.61)
ruditapes2_c1663	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase PR2 (EC 2.7.10.2)
ruditapes2_c1663	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase PR2 (EC 2.7.10.2)
ruditapes2_c1663	salivary gland cell autophagic cell death	developmental processes	P	Tyrosine-protein kinase PR2 (EC 2.7.10.2)
ruditapes2_c1663	salivary gland cell autophagic cell death	death	P	Tyrosine-protein kinase PR2 (EC 2.7.10.2)
ruditapes2_c1663	autophagic cell death	death	P	Tyrosine-protein kinase PR2 (EC 2.7.10.2)
ruditapes_c18722	cytokinesis after mitosis	cell cycle and proliferation	P	G2/mitotic-specific cyclin-B3
ruditapes_c18722	regulation of G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-B3
ruditapes_c18722	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	G2/mitotic-specific cyclin-B3
ruditapes_c18722	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	G2/mitotic-specific cyclin-B3
ruditapes_c18722	mitosis	cell cycle and proliferation	P	G2/mitotic-specific cyclin-B3
ruditapes_c18722	mitosis	cell organization and biogenesis	P	G2/mitotic-specific cyclin-B3
ruditapes_c18722	regulation of cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-B3
ruditapes_c18722	syncytial blastoderm mitotic cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-B3
ruditapes_c18722	syncytial blastoderm mitotic cell cycle	developmental processes	P	G2/mitotic-specific cyclin-B3
ruditapes_c18722	cytokinesis	other biological processes	P	G2/mitotic-specific cyclin-B3
ruditapes_c18722	cell cycle	cell cycle and proliferation	P	G2/mitotic-specific cyclin-B3
ruditapes_c18722	cell division	other biological processes	P	G2/mitotic-specific cyclin-B3
ruditapes_c16452	myoblast fusion	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	myoblast fusion	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	sarcomere organization	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	sarcomere organization	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	locomotion	other biological processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	mitosis	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	mitotic chromosome condensation	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	mitotic chromosome condensation	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	mitotic chromosome condensation	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	mitotic chromosome condensation	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	locomotion	other biological processes	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	muscle organ development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	mitosis	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	mitosis	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	mitotic chromosome condensation	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	mitotic chromosome condensation	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	myoblast fusion	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	myoblast fusion	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	sister chromatid cohesion	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	somatic muscle development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	sarcomere organization	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	sarcomere organization	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	locomotion	other biological processes	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	muscle attachment	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	sister chromatid cohesion	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	muscle attachment	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	muscle organ development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	cell division	other biological processes	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	sister chromatid cohesion	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	visceral muscle development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	skeletal muscle tissue development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	muscle attachment	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	mesoderm development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	cell division	other biological processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	sister chromatid cohesion	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	cell cycle	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	sarcomere organization	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	sarcomere organization	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	cell division	other biological processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	muscle organ development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	cell cycle	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	visceral muscle development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	somatic muscle development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	sister chromatid cohesion	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	sister chromatid cohesion	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	myoblast fusion	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	myoblast fusion	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	myoblast fusion	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	myoblast fusion	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	skeletal muscle tissue development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	mesoderm development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	mitosis	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	mitosis	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	muscle organ development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	sarcomere organization	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	sarcomere organization	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	skeletal muscle tissue development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	mesoderm development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	mitotic chromosome condensation	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	mitotic chromosome condensation	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	somatic muscle development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	muscle attachment	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	cell division	other biological processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	visceral muscle development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	sister chromatid cohesion	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_lrc36604	cell cycle	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	cell cycle	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	mitosis	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	mitosis	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c13488	somatic muscle development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c25577	mitosis	cell organization and biogenesis	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	visceral muscle development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	skeletal muscle tissue development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	mesoderm development	developmental processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	locomotion	other biological processes	P	Titin (D-Titin) (Kettin)
ruditapes_c16452	sister chromatid cohesion	cell cycle and proliferation	P	Titin (D-Titin) (Kettin)
ruditapes_c16720	ion transport	transport	P	Neuronal acetylcholine receptor subunit alpha-10 (Alpha 10 nAChR) (Nicotinic acetylcholine receptor subunit alpha-10) (NACHR alpha-10)
ruditapes_c16720	transmembrane calcium ion transport	transport	P	Neuronal acetylcholine receptor subunit alpha-10 (Alpha 10 nAChR) (Nicotinic acetylcholine receptor subunit alpha-10) (NACHR alpha-10)
ruditapes_c16720	transport	transport	P	Neuronal acetylcholine receptor subunit alpha-10 (Alpha 10 nAChR) (Nicotinic acetylcholine receptor subunit alpha-10) (NACHR alpha-10)
ruditapes_c16720	calcium ion transport	transport	P	Neuronal acetylcholine receptor subunit alpha-10 (Alpha 10 nAChR) (Nicotinic acetylcholine receptor subunit alpha-10) (NACHR alpha-10)
ruditapes_c22512	transport	transport	P	Coatomer subunit gamma-2 (Gamma-2-coat protein) (Gamma-2-COP)
ruditapes_c22512	vesicle-mediated transport	transport	P	Coatomer subunit gamma-2 (Gamma-2-coat protein) (Gamma-2-COP)
ruditapes_c22512	protein transport	transport	P	Coatomer subunit gamma-2 (Gamma-2-coat protein) (Gamma-2-COP)
ruditapes_c22512	intracellular protein transport	transport	P	Coatomer subunit gamma-2 (Gamma-2-coat protein) (Gamma-2-COP)
ruditapes_c15027	transport	transport	P	V-type proton ATPase subunit F (V-ATPase subunit F) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F) (Fragment)
ruditapes_c15027	ion transport	transport	P	V-type proton ATPase subunit F (V-ATPase subunit F) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F) (Fragment)
ruditapes_c15027	proton transport	transport	P	V-type proton ATPase subunit F (V-ATPase subunit F) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F) (Fragment)
ruditapes_c15027	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit F (V-ATPase subunit F) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F) (Fragment)
ruditapes_lrc35879	left lung morphogenesis	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	spleen development	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	digestive tract morphogenesis	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	heart looping	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	respiratory system development	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	gastrulation	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	post-embryonic development	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	anatomical structure development	other biological processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	endoderm development	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	multicellular organismal development	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	determination of left/right symmetry	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	Wnt receptor signaling pathway through beta-catenin	signal transduction	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	liver development	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	BMP signaling pathway	signal transduction	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	atrial septum morphogenesis	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	anterior/posterior pattern formation	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_lrc35879	heart morphogenesis	developmental processes	P	Cryptic protein (Cripto-related factor 1)
ruditapes_c25052	positive regulation of cell proliferation	cell cycle and proliferation	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	proximal/distal pattern formation	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	face development	other biological processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	hindbrain development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	positive regulation of gene expression	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	retinoic acid metabolic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	retinoic acid receptor signaling pathway	signal transduction	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	determination of bilateral symmetry	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	metabolic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	neural crest cell development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	pancreas development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	retinal metabolic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	neural tube development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	embryonic limb morphogenesis	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	anterior/posterior pattern formation	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	morphogenesis of embryonic epithelium	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	camera-type eye development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	response to cytokine stimulus	other biological processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	negative regulation of cell proliferation	cell cycle and proliferation	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	forebrain development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	blood vessel development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	neuron differentiation	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	9-cis-retinoic acid biosynthetic process	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	embryonic camera-type eye development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	oxidation reduction	other metabolic processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	regulation of endothelial cell proliferation	cell cycle and proliferation	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	embryonic gut development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	embryonic forelimb morphogenesis	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	positive regulation of apoptosis	death	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	lung development	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c25052	heart morphogenesis	developmental processes	P	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II)) (zRalDH)
ruditapes_c17130	L-ascorbic acid biosynthetic process	other metabolic processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes_c17130	regulation of catalytic activity	other biological processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes_c17130	cellular calcium ion homeostasis	other biological processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes_c17130	regulation of calcium-mediated signaling	signal transduction	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes_c17130	positive regulation of ATPase activity	other biological processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)
ruditapes_c25498	cell adhesion	cell adhesion	P	Fucolectin-6
ruditapes_c25498	regulation of cellular defense response	stress response	P	Fucolectin-6
ruditapes_c25498	"regulation of complement activation, lectin pathway"	stress response	P	Fucolectin-6
ruditapes_c25498	"regulation of complement activation, lectin pathway"	protein metabolism	P	Fucolectin-6
ruditapes_c25498	regulation of innate immune response	stress response	P	Fucolectin-6
ruditapes_c16170	cell adhesion	cell adhesion	P	Fucolectin-1
ruditapes_c16170	regulation of innate immune response	stress response	P	Fucolectin-1
ruditapes_c16170	regulation of cellular defense response	stress response	P	Fucolectin-1
ruditapes_c16170	"regulation of complement activation, lectin pathway"	stress response	P	Fucolectin-1
ruditapes_c16170	"regulation of complement activation, lectin pathway"	protein metabolism	P	Fucolectin-1
ruditapes_lrc37470	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-b
ruditapes2_lrc4632	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-b
ruditapes_lrc36572	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-b
ruditapes2_lrc4632	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-b
ruditapes_lrc36572	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-b
ruditapes_lrc36572	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-b
ruditapes_lrc37470	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta-b
ruditapes2_lrc4632	sequestering of actin monomers	protein metabolism	P	Thymosin beta-b
ruditapes2_lrc4632	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-b
ruditapes_lrc37470	sequestering of actin monomers	protein metabolism	P	Thymosin beta-b
ruditapes_lrc37470	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta-b
ruditapes_lrc36572	sequestering of actin monomers	protein metabolism	P	Thymosin beta-b
ruditapes_c11393	ATP biosynthetic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_c16706	potassium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_c16706	ATP metabolic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_c11393	ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_c16706	transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_c16706	ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_c11393	transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_c16706	sodium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_c11393	sodium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_c11393	ATP metabolic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_c11393	potassium ion transport	transport	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_c16706	ATP biosynthetic process	other metabolic processes	P	Sodium/potassium-transporting ATPase subunit beta-233 (Sodium/potassium-dependent ATPase subunit beta-233)
ruditapes_lrc15375	nitric oxide biosynthetic process	other metabolic processes	P	Nitric oxide synthase (NOS) (EC 1.14.13.39) (Fragment)
ruditapes_lrc15375	oxidation reduction	other metabolic processes	P	Nitric oxide synthase (NOS) (EC 1.14.13.39) (Fragment)
ruditapes_c18129	iron ion homeostasis	other biological processes	P	Solute carrier family 40 member 1 (Ferroportin-1)
ruditapes_c18129	embryonic hemopoiesis	developmental processes	P	Solute carrier family 40 member 1 (Ferroportin-1)
ruditapes_c18129	response to copper ion	other biological processes	P	Solute carrier family 40 member 1 (Ferroportin-1)
ruditapes_c18129	response to iron ion	other biological processes	P	Solute carrier family 40 member 1 (Ferroportin-1)
ruditapes_c18129	transport	transport	P	Solute carrier family 40 member 1 (Ferroportin-1)
ruditapes_c18129	iron ion transport	transport	P	Solute carrier family 40 member 1 (Ferroportin-1)
ruditapes_c18129	ion transport	transport	P	Solute carrier family 40 member 1 (Ferroportin-1)
ruditapes_c18129	transmembrane iron ion transport	transport	P	Solute carrier family 40 member 1 (Ferroportin-1)
ruditapes_c18129	nucleate erythrocyte maturation	developmental processes	P	Solute carrier family 40 member 1 (Ferroportin-1)
ruditapes_c18129	hemoglobin biosynthetic process	protein metabolism	P	Solute carrier family 40 member 1 (Ferroportin-1)
ruditapes_c28421	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein Hox-D13
ruditapes_c28421	"transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein Hox-D13
ruditapes_c28421	multicellular organismal development	developmental processes	P	Homeobox protein Hox-D13
ruditapes2_c157	translation	protein metabolism	P	60S ribosomal protein L31
ruditapes_c16800	apoptosis	death	P	Probable Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript protein homolog) (Transmembrane BAX inhibitor motif-containing protein 6)
ruditapes_c16800	negative regulation of apoptosis	death	P	Probable Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript protein homolog) (Transmembrane BAX inhibitor motif-containing protein 6)
ruditapes_c9662	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase SIK2 (EC 2.7.11.1) (Qin-induced kinase) (Salt-inducible kinase 2) (SIK-2) (Serine/threonine-protein kinase SNF1-like kinase 2)
ruditapes_c9662	regulation of insulin receptor signaling pathway	signal transduction	P	Serine/threonine-protein kinase SIK2 (EC 2.7.11.1) (Qin-induced kinase) (Salt-inducible kinase 2) (SIK-2) (Serine/threonine-protein kinase SNF1-like kinase 2)
ruditapes_c9662	protein kinase cascade	signal transduction	P	Serine/threonine-protein kinase SIK2 (EC 2.7.11.1) (Qin-induced kinase) (Salt-inducible kinase 2) (SIK-2) (Serine/threonine-protein kinase SNF1-like kinase 2)
ruditapes_c9662	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase SIK2 (EC 2.7.11.1) (Qin-induced kinase) (Salt-inducible kinase 2) (SIK-2) (Serine/threonine-protein kinase SNF1-like kinase 2)
ruditapes_c15160	Notch signaling pathway	signal transduction	P	Delta-like protein C (DeltaC) (delC)
ruditapes_c15160	somitogenesis	developmental processes	P	Delta-like protein C (DeltaC) (delC)
ruditapes_c15160	cell differentiation	other biological processes	P	Delta-like protein C (DeltaC) (delC)
ruditapes_c15160	multicellular organismal development	developmental processes	P	Delta-like protein C (DeltaC) (delC)
ruditapes_c15160	neuron development	developmental processes	P	Delta-like protein C (DeltaC) (delC)
ruditapes_c15160	cell communication	other biological processes	P	Delta-like protein C (DeltaC) (delC)
ruditapes2_c485	proteolysis	protein metabolism	P	Snake venom metalloproteinase H5 (SVMP) (EC 3.4.24.-) (Fragment)
ruditapes2_c3201	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1-B (EC 3.4.25.1) (20S proteasome beta-6 subunit B) (B6-B)
ruditapes2_c3201	proteolysis	protein metabolism	P	Proteasome subunit beta type-1-B (EC 3.4.25.1) (20S proteasome beta-6 subunit B) (B6-B)
ruditapes_c5996	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1-B (EC 3.4.25.1) (20S proteasome beta-6 subunit B) (B6-B)
ruditapes_c5996	proteolysis	protein metabolism	P	Proteasome subunit beta type-1-B (EC 3.4.25.1) (20S proteasome beta-6 subunit B) (B6-B)
ruditapes2_c3416	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit beta type-1-A (EC 3.4.25.1) (20S proteasome beta-6 subunit A) (B6-A)
ruditapes2_c3416	proteolysis	protein metabolism	P	Proteasome subunit beta type-1-A (EC 3.4.25.1) (20S proteasome beta-6 subunit A) (B6-A)
ruditapes_c13889	cell adhesion	cell adhesion	P	Kielin/chordin-like protein (Cysteine-rich motor neuron 2 protein) (CRIM-2) (Kielin)
ruditapes_c1174	cell adhesion	cell adhesion	P	Kielin/chordin-like protein (Cysteine-rich motor neuron 2 protein) (CRIM-2) (Kielin)
ruditapes2_c1305	cell adhesion	cell adhesion	P	Kielin/chordin-like protein (Cysteine-rich motor neuron 2 protein) (CRIM-2) (Kielin)
ruditapes2_c2252	cell adhesion	cell adhesion	P	Kielin/chordin-like protein (Cysteine-rich motor neuron 2 protein) (CRIM-2) (Kielin)
ruditapes2_c3299	cell adhesion	cell adhesion	P	Kielin/chordin-like protein (Cysteine-rich motor neuron 2 protein) (CRIM-2) (Kielin)
ruditapes_lrc16588	induction by virus of cell-cell fusion in host	other biological processes	P	Fusion glycoprotein F0 (Protein F) [Cleaved into: Fusion glycoprotein F2; Fusion glycoprotein F1]
ruditapes_c15967	interspecies interaction between organisms	other biological processes	P	Replicase polyprotein [Cleaved into: Protein 1A (CrPV-1A); Protein 2A; Protein 2B; Protein 2C; Protein 3A; Protein 3B; 3C-like protease (EC 3.4.22.-); RNA-directed RNA polymerase 3D-POL (EC 2.7.7.48)]
ruditapes_c15967	"transcription, DNA-dependent"	RNA metabolism	P	Replicase polyprotein [Cleaved into: Protein 1A (CrPV-1A); Protein 2A; Protein 2B; Protein 2C; Protein 3A; Protein 3B; 3C-like protease (EC 3.4.22.-); RNA-directed RNA polymerase 3D-POL (EC 2.7.7.48)]
ruditapes_c15967	RNA biosynthetic process	RNA metabolism	P	Replicase polyprotein [Cleaved into: Protein 1A (CrPV-1A); Protein 2A; Protein 2B; Protein 2C; Protein 3A; Protein 3B; 3C-like protease (EC 3.4.22.-); RNA-directed RNA polymerase 3D-POL (EC 2.7.7.48)]
ruditapes_c15967	proteolysis	protein metabolism	P	Replicase polyprotein [Cleaved into: Protein 1A (CrPV-1A); Protein 2A; Protein 2B; Protein 2C; Protein 3A; Protein 3B; 3C-like protease (EC 3.4.22.-); RNA-directed RNA polymerase 3D-POL (EC 2.7.7.48)]
ruditapes_c15967	viral genome replication	other biological processes	P	Replicase polyprotein [Cleaved into: Protein 1A (CrPV-1A); Protein 2A; Protein 2B; Protein 2C; Protein 3A; Protein 3B; 3C-like protease (EC 3.4.22.-); RNA-directed RNA polymerase 3D-POL (EC 2.7.7.48)]
ruditapes_c30748	virus-host interaction	other biological processes	P	Envelope glycoprotein (GP) (M polyprotein) [Cleaved into: Glycoprotein G1; Glycoprotein G2]
ruditapes_c30748	interspecies interaction between organisms	other biological processes	P	Envelope glycoprotein (GP) (M polyprotein) [Cleaved into: Glycoprotein G1; Glycoprotein G2]
ruditapes_c29107	RNA biosynthetic process	RNA metabolism	P	RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase) (Protein A)
ruditapes_c29107	"transcription, DNA-dependent"	RNA metabolism	P	RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase) (Protein A)
ruditapes_c29107	viral genome replication	other biological processes	P	RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase) (Protein A)
ruditapes_c8107	metabolic process	other metabolic processes	P	Outer capsid protein VP3 [Includes: mRNA guanylyltransferase (EC 2.7.7.50); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56)]
ruditapes_c8107	mRNA capping	RNA metabolism	P	Outer capsid protein VP3 [Includes: mRNA guanylyltransferase (EC 2.7.7.50); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56)]
ruditapes_c8107	mRNA processing	RNA metabolism	P	Outer capsid protein VP3 [Includes: mRNA guanylyltransferase (EC 2.7.7.50); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56)]
ruditapes_c8107	methylation	other metabolic processes	P	Outer capsid protein VP3 [Includes: mRNA guanylyltransferase (EC 2.7.7.50); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56)]
ruditapes_c4609	"transcription, DNA-dependent"	RNA metabolism	P	Poly(A) polymerase catalytic subunit (EC 2.7.7.19) (Poly(A) polymerase large subunit) (PAP-L) (VP55)
ruditapes_c4609	mRNA processing	RNA metabolism	P	Poly(A) polymerase catalytic subunit (EC 2.7.7.19) (Poly(A) polymerase large subunit) (PAP-L) (VP55)
ruditapes_c6631	G-protein coupled receptor protein signaling pathway	signal transduction	P	G-protein coupled receptor homolog FPV021
ruditapes_c6631	signal transduction	signal transduction	P	G-protein coupled receptor homolog FPV021
ruditapes_c26675	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase 133 kDa polypeptide (EC 2.7.7.6)
ruditapes_c4668	viral genome replication	other biological processes	P	Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine protease p27 (p27) (EC 3.4.21.-); Protein p20; RNA-directed RNA polymerase p57 (p57) (EC 2.7.7.48)]
ruditapes_c4668	"transcription, DNA-dependent"	RNA metabolism	P	Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine protease p27 (p27) (EC 3.4.21.-); Protein p20; RNA-directed RNA polymerase p57 (p57) (EC 2.7.7.48)]
ruditapes_c4668	RNA biosynthetic process	RNA metabolism	P	Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine protease p27 (p27) (EC 3.4.21.-); Protein p20; RNA-directed RNA polymerase p57 (p57) (EC 2.7.7.48)]
ruditapes_c4668	proteolysis	protein metabolism	P	Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine protease p27 (p27) (EC 3.4.21.-); Protein p20; RNA-directed RNA polymerase p57 (p57) (EC 2.7.7.48)]
ruditapes_c12333	response to peptide hormone stimulus	other biological processes	P	Metalloproteinase inhibitor 4 (Tissue inhibitor of metalloproteinases 4) (TIMP-4)
ruditapes_c12333	ovulation cycle	other biological processes	P	Metalloproteinase inhibitor 4 (Tissue inhibitor of metalloproteinases 4) (TIMP-4)
ruditapes_c12333	negative regulation of catalytic activity	other biological processes	P	Metalloproteinase inhibitor 4 (Tissue inhibitor of metalloproteinases 4) (TIMP-4)
ruditapes_c12333	response to cytokine stimulus	other biological processes	P	Metalloproteinase inhibitor 4 (Tissue inhibitor of metalloproteinases 4) (TIMP-4)
ruditapes_c12333	response to hormone stimulus	other biological processes	P	Metalloproteinase inhibitor 4 (Tissue inhibitor of metalloproteinases 4) (TIMP-4)
ruditapes_c12333	response to drug	other biological processes	P	Metalloproteinase inhibitor 4 (Tissue inhibitor of metalloproteinases 4) (TIMP-4)
ruditapes_c12333	central nervous system development	developmental processes	P	Metalloproteinase inhibitor 4 (Tissue inhibitor of metalloproteinases 4) (TIMP-4)
ruditapes_c12333	response to lipopolysaccharide	other biological processes	P	Metalloproteinase inhibitor 4 (Tissue inhibitor of metalloproteinases 4) (TIMP-4)
ruditapes_c20880	spermatogenesis	other biological processes	P	Translin-associated protein X (Translin-associated factor X)
ruditapes_c20880	cell differentiation	other biological processes	P	Translin-associated protein X (Translin-associated factor X)
ruditapes_c20880	multicellular organismal development	developmental processes	P	Translin-associated protein X (Translin-associated factor X)
ruditapes_c20753	response to oxidative stress	stress response	P	Glutathione peroxidase 2 (GPx-2) (GSHPx-2) (EC 1.11.1.9) (Glutathione peroxidase-gastrointestinal) (GPx-GI) (GSHPx-GI)
ruditapes_c20753	oxidation reduction	other metabolic processes	P	Glutathione peroxidase 2 (GPx-2) (GSHPx-2) (EC 1.11.1.9) (Glutathione peroxidase-gastrointestinal) (GPx-GI) (GSHPx-GI)
ruditapes_c5375	cell adhesion	cell adhesion	P	WNT1-inducible-signaling pathway protein 2 (WISP-2) (CCN family member 5) (CCN family protein COP-1) (Connective tissue growth factor-like protein) (CTGF-L)
ruditapes_c5375	regulation of cell growth	other biological processes	P	WNT1-inducible-signaling pathway protein 2 (WISP-2) (CCN family member 5) (CCN family protein COP-1) (Connective tissue growth factor-like protein) (CTGF-L)
ruditapes_c5375	negative regulation of cell proliferation	cell cycle and proliferation	P	WNT1-inducible-signaling pathway protein 2 (WISP-2) (CCN family member 5) (CCN family protein COP-1) (Connective tissue growth factor-like protein) (CTGF-L)
ruditapes_c27188	cell proliferation	cell cycle and proliferation	P	Neutral ceramidase (N-CDase) (NCDase) (EC 3.5.1.23) (Acylsphingosine deacylase 2) (N-acylsphingosine amidohydrolase 2) [Cleaved into: Neutral ceramidase soluble form]
ruditapes_c27188	response to organic substance	other biological processes	P	Neutral ceramidase (N-CDase) (NCDase) (EC 3.5.1.23) (Acylsphingosine deacylase 2) (N-acylsphingosine amidohydrolase 2) [Cleaved into: Neutral ceramidase soluble form]
ruditapes_c27188	lipid metabolic process	other metabolic processes	P	Neutral ceramidase (N-CDase) (NCDase) (EC 3.5.1.23) (Acylsphingosine deacylase 2) (N-acylsphingosine amidohydrolase 2) [Cleaved into: Neutral ceramidase soluble form]
ruditapes_c27188	apoptosis	death	P	Neutral ceramidase (N-CDase) (NCDase) (EC 3.5.1.23) (Acylsphingosine deacylase 2) (N-acylsphingosine amidohydrolase 2) [Cleaved into: Neutral ceramidase soluble form]
ruditapes_c27188	sphingolipid metabolic process	other metabolic processes	P	Neutral ceramidase (N-CDase) (NCDase) (EC 3.5.1.23) (Acylsphingosine deacylase 2) (N-acylsphingosine amidohydrolase 2) [Cleaved into: Neutral ceramidase soluble form]
ruditapes_c4369	biosynthetic process	other metabolic processes	P	Galactosylceramide sulfotransferase (GalCer sulfotransferase) (EC 2.8.2.11) (3'-phosphoadenosine-5'-phosphosulfate:GalCer sulfotransferase) (3'-phosphoadenylylsulfate:galactosylceramide 3'-sulfotransferase) (Cerebroside sulfotransferase)
ruditapes_c4369	glycolipid biosynthetic process	other metabolic processes	P	Galactosylceramide sulfotransferase (GalCer sulfotransferase) (EC 2.8.2.11) (3'-phosphoadenosine-5'-phosphosulfate:GalCer sulfotransferase) (3'-phosphoadenylylsulfate:galactosylceramide 3'-sulfotransferase) (Cerebroside sulfotransferase)
ruditapes_c4369	myelination	developmental processes	P	Galactosylceramide sulfotransferase (GalCer sulfotransferase) (EC 2.8.2.11) (3'-phosphoadenosine-5'-phosphosulfate:GalCer sulfotransferase) (3'-phosphoadenylylsulfate:galactosylceramide 3'-sulfotransferase) (Cerebroside sulfotransferase)
ruditapes_c4369	spermatogenesis	other biological processes	P	Galactosylceramide sulfotransferase (GalCer sulfotransferase) (EC 2.8.2.11) (3'-phosphoadenosine-5'-phosphosulfate:GalCer sulfotransferase) (3'-phosphoadenylylsulfate:galactosylceramide 3'-sulfotransferase) (Cerebroside sulfotransferase)
ruditapes_c4369	galactosylceramide biosynthetic process	other metabolic processes	P	Galactosylceramide sulfotransferase (GalCer sulfotransferase) (EC 2.8.2.11) (3'-phosphoadenosine-5'-phosphosulfate:GalCer sulfotransferase) (3'-phosphoadenylylsulfate:galactosylceramide 3'-sulfotransferase) (Cerebroside sulfotransferase)
ruditapes2_c2176	cell adhesion	cell adhesion	P	Ninjurin-2 (Nerve injury-induced protein 2)
ruditapes2_c2176	tissue regeneration	stress response	P	Ninjurin-2 (Nerve injury-induced protein 2)
ruditapes2_c2176	tissue regeneration	developmental processes	P	Ninjurin-2 (Nerve injury-induced protein 2)
ruditapes_c16014	G-protein coupled receptor protein signaling pathway	signal transduction	P	Apelin receptor (Angiotensin receptor-like 1) (B78) (G-protein coupled receptor APJ) (GPCR34)
ruditapes_c16014	regulation of body fluid levels	other biological processes	P	Apelin receptor (Angiotensin receptor-like 1) (B78) (G-protein coupled receptor APJ) (GPCR34)
ruditapes_c16014	signal transduction	signal transduction	P	Apelin receptor (Angiotensin receptor-like 1) (B78) (G-protein coupled receptor APJ) (GPCR34)
ruditapes_c8178	ion transport	transport	P	5-hydroxytryptamine receptor 3B (5-HT3-B) (5-HT3B) (Serotonin receptor 3B)
ruditapes_c8178	serotonin receptor signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 3B (5-HT3-B) (5-HT3B) (Serotonin receptor 3B)
ruditapes_c8178	transport	transport	P	5-hydroxytryptamine receptor 3B (5-HT3-B) (5-HT3B) (Serotonin receptor 3B)
ruditapes_c7545	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	angiogenesis	developmental processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	signal transduction	signal transduction	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	erythrocyte differentiation	developmental processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	embryonic placenta development	developmental processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	mitochondrion organization	cell organization and biogenesis	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	cell maturation	other biological processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	regulation of transcription from RNA polymerase II promoter in response to oxidative stress	stress response	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	regulation of transcription from RNA polymerase II promoter in response to oxidative stress	RNA metabolism	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	blood vessel remodeling	developmental processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	myoblast cell fate commitment	developmental processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	multicellular organismal development	developmental processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	lung development	developmental processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	cell differentiation	other biological processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	"transcription, DNA-dependent"	RNA metabolism	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	surfactant homeostasis	other biological processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	response to oxidative stress	stress response	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	hemopoiesis	developmental processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	visual perception	other biological processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	response to hypoxia	stress response	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	norepinephrine metabolic process	other metabolic processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes_c7545	regulation of heart rate	other biological processes	P	Endothelial PAS domain-containing protein 1 (EPAS-1) (Hypoxia-inducible factor 2-alpha) (HIF-2-alpha) (HIF2-alpha)
ruditapes2_c4550	positive regulation of TOR signaling pathway	signal transduction	P	Ragulator complex protein LAMTOR2 (Endosomal adaptor protein p14) (Late endosomal/lysosomal Mp1-interacting protein) (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2) (Mitogen-activated protein-binding protein-interacting protein) (Roadblock domain-containing protein 3)
ruditapes2_c4550	cellular protein localization	other biological processes	P	Ragulator complex protein LAMTOR2 (Endosomal adaptor protein p14) (Late endosomal/lysosomal Mp1-interacting protein) (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2) (Mitogen-activated protein-binding protein-interacting protein) (Roadblock domain-containing protein 3)
ruditapes2_c4550	activation of MAPKK activity	signal transduction	P	Ragulator complex protein LAMTOR2 (Endosomal adaptor protein p14) (Late endosomal/lysosomal Mp1-interacting protein) (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2) (Mitogen-activated protein-binding protein-interacting protein) (Roadblock domain-containing protein 3)
ruditapes2_c4550	activation of MAPKK activity	protein metabolism	P	Ragulator complex protein LAMTOR2 (Endosomal adaptor protein p14) (Late endosomal/lysosomal Mp1-interacting protein) (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2) (Mitogen-activated protein-binding protein-interacting protein) (Roadblock domain-containing protein 3)
ruditapes2_c4550	cell growth	other biological processes	P	Ragulator complex protein LAMTOR2 (Endosomal adaptor protein p14) (Late endosomal/lysosomal Mp1-interacting protein) (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2) (Mitogen-activated protein-binding protein-interacting protein) (Roadblock domain-containing protein 3)
ruditapes_c22962	sodium ion transport	transport	P	Acid-sensing ion channel 4 (ASIC4) (Amiloride-sensitive cation channel 4) (Spinal chord ASIC)
ruditapes_c22962	transport	transport	P	Acid-sensing ion channel 4 (ASIC4) (Amiloride-sensitive cation channel 4) (Spinal chord ASIC)
ruditapes_c22962	ion transport	transport	P	Acid-sensing ion channel 4 (ASIC4) (Amiloride-sensitive cation channel 4) (Spinal chord ASIC)
ruditapes2_c6242	transport	transport	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes2_c359	ATP catabolic process	other metabolic processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c37164	microtubule-based movement	other biological processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes2_c359	transport	transport	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c37164	transport	transport	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes2_c6242	ATP catabolic process	other metabolic processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_s38912	stress granule assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c29888	stress granule assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes2_c6242	cytoplasmic mRNA processing body assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c29888	cytoplasmic mRNA processing body assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_s38912	cytoplasmic mRNA processing body assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_s38912	transport	transport	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes2_c359	cytoplasmic mRNA processing body assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes2_c6242	microtubule-based movement	other biological processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c29888	transport	transport	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c29888	microtubule-based movement	other biological processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes2_c6242	stress granule assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes2_c359	stress granule assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c37164	stress granule assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c37164	ATP catabolic process	other metabolic processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_s38912	ATP catabolic process	other metabolic processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_s38912	microtubule-based movement	other biological processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c37164	cytoplasmic mRNA processing body assembly	cell organization and biogenesis	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes2_c359	microtubule-based movement	other biological processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c29888	ATP catabolic process	other metabolic processes	P	"Cytoplasmic dynein 1 heavy chain 1 (Cytoplasmic dynein heavy chain 1) (Dynein heavy chain, cytosolic)"
ruditapes_c28266	nitrogen compound metabolic process	other metabolic processes	P	Omega-amidase NIT2 (EC 3.5.1.3) (Nitrilase homolog 2)
ruditapes_c8271	cell division	other biological processes	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	mitosis	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	mitosis	cell organization and biogenesis	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	response to peptide hormone stimulus	other biological processes	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	apoptosis	death	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	negative regulation of caspase activity	death	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	chromosome segregation	other biological processes	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	cell cycle	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	positive regulation of mitotic cell cycle	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	establishment of chromosome localization	other biological processes	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	spindle checkpoint	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	response to glucocorticoid stimulus	other biological processes	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	response to drug	other biological processes	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	positive regulation of cell cycle	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	cytokinesis	other biological processes	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	positive regulation of exit from mitosis	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	positive regulation of exit from mitosis	cell organization and biogenesis	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	protein complex localization	other biological processes	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes_c8271	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor survivin)
ruditapes2_c6248	endocytosis	transport	P	Low-density lipoprotein receptor-related protein 1B (LRP-1B) (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT)
ruditapes2_c6248	endocytosis	cell organization and biogenesis	P	Low-density lipoprotein receptor-related protein 1B (LRP-1B) (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT)
ruditapes2_c4058	endocytosis	transport	P	Low-density lipoprotein receptor-related protein 1B (LRP-1B) (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT)
ruditapes2_c4058	endocytosis	cell organization and biogenesis	P	Low-density lipoprotein receptor-related protein 1B (LRP-1B) (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT)
ruditapes_c13372	endocytosis	transport	P	Low-density lipoprotein receptor-related protein 1B (LRP-1B) (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT)
ruditapes_c13372	endocytosis	cell organization and biogenesis	P	Low-density lipoprotein receptor-related protein 1B (LRP-1B) (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT)
ruditapes_c23694	serine phosphorylation of STAT3 protein	signal transduction	P	Interleukin-24 (IL-24) (Cytokine-like protein Mob-5)
ruditapes_c23694	serine phosphorylation of STAT3 protein	protein metabolism	P	Interleukin-24 (IL-24) (Cytokine-like protein Mob-5)
ruditapes_c23694	positive regulation of tyrosine phosphorylation of Stat3 protein	signal transduction	P	Interleukin-24 (IL-24) (Cytokine-like protein Mob-5)
ruditapes_c23694	positive regulation of tyrosine phosphorylation of Stat3 protein	protein metabolism	P	Interleukin-24 (IL-24) (Cytokine-like protein Mob-5)
ruditapes_c23694	apoptosis	death	P	Interleukin-24 (IL-24) (Cytokine-like protein Mob-5)
ruditapes_c23694	wound healing	stress response	P	Interleukin-24 (IL-24) (Cytokine-like protein Mob-5)
ruditapes_c23694	negative regulation of cell proliferation	cell cycle and proliferation	P	Interleukin-24 (IL-24) (Cytokine-like protein Mob-5)
ruditapes_c23694	negative regulation of cell migration	other biological processes	P	Interleukin-24 (IL-24) (Cytokine-like protein Mob-5)
ruditapes_c23694	positive regulation of cell proliferation	cell cycle and proliferation	P	Interleukin-24 (IL-24) (Cytokine-like protein Mob-5)
ruditapes_c11936	"regulation of transcription, DNA-dependent"	RNA metabolism	P	General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain-containing protein 1) (Binding factor for early enhancer)
ruditapes_c11936	embryonic development	developmental processes	P	General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain-containing protein 1) (Binding factor for early enhancer)
ruditapes_c11936	"transcription, DNA-dependent"	RNA metabolism	P	General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain-containing protein 1) (Binding factor for early enhancer)
ruditapes_c11936	multicellular organismal development	developmental processes	P	General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain-containing protein 1) (Binding factor for early enhancer)
ruditapes_c20229	retinol metabolic process	other metabolic processes	P	Lecithin retinol acyltransferase (EC 2.3.1.135) (Phosphatidylcholine--retinol O-acyltransferase)
ruditapes_c20229	embryonic development	developmental processes	P	Lecithin retinol acyltransferase (EC 2.3.1.135) (Phosphatidylcholine--retinol O-acyltransferase)
ruditapes_c20229	response to stimulus	other biological processes	P	Lecithin retinol acyltransferase (EC 2.3.1.135) (Phosphatidylcholine--retinol O-acyltransferase)
ruditapes_c20229	visual perception	other biological processes	P	Lecithin retinol acyltransferase (EC 2.3.1.135) (Phosphatidylcholine--retinol O-acyltransferase)
ruditapes_c20229	vitamin A metabolic process	other metabolic processes	P	Lecithin retinol acyltransferase (EC 2.3.1.135) (Phosphatidylcholine--retinol O-acyltransferase)
ruditapes_lrc12691	social behavior	other biological processes	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	brain morphogenesis	developmental processes	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	striatum development	developmental processes	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	cilium morphogenesis	cell organization and biogenesis	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	hippocampus development	developmental processes	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	cellular protein metabolic process	protein metabolism	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	photoreceptor cell maintenance	other biological processes	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	spermatid development	other biological processes	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	fat cell differentiation	other biological processes	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	flagellum assembly	cell organization and biogenesis	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	sensory cilium assembly	cell organization and biogenesis	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	detection of mechanical stimulus involved in sensory perception of sound	other biological processes	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	cilium assembly	cell organization and biogenesis	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	regulation of cilium beat frequency involved in ciliary motility	other biological processes	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	sensory perception of smell	other biological processes	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_lrc12691	cerebral cortex development	developmental processes	P	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin (Protein Bbs6 homolog)
ruditapes_c17999	neuron projection development	developmental processes	P	Leucine-rich glioma-inactivated protein 1
ruditapes_c17999	neuron projection development	cell organization and biogenesis	P	Leucine-rich glioma-inactivated protein 1
ruditapes_c17999	positive regulation of synaptic transmission	cell-cell signaling	P	Leucine-rich glioma-inactivated protein 1
ruditapes_c17999	positive regulation of cell growth	other biological processes	P	Leucine-rich glioma-inactivated protein 1
ruditapes_c17999	protein homooligomerization	cell organization and biogenesis	P	Leucine-rich glioma-inactivated protein 1
ruditapes_c17999	axon guidance	developmental processes	P	Leucine-rich glioma-inactivated protein 1
ruditapes_c17999	axon guidance	cell organization and biogenesis	P	Leucine-rich glioma-inactivated protein 1
ruditapes_s36110	apoptosis	death	P	Baculoviral IAP repeat-containing protein 1f (Neuronal apoptosis inhibitory protein 6)
ruditapes_c18948	apoptosis	death	P	Baculoviral IAP repeat-containing protein 1f (Neuronal apoptosis inhibitory protein 6)
ruditapes2_c122	lipid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase)
ruditapes_c2095	lipid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase)
ruditapes2_c960	metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase)
ruditapes2_c122	fatty acid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase)
ruditapes2_c122	metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase)
ruditapes_c2095	metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase)
ruditapes_c2095	fatty acid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase)
ruditapes2_c960	lipid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase)
ruditapes2_c960	fatty acid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase)
ruditapes_c3160	biological_process	other biological processes	P	"28S ribosomal protein S34, mitochondrial (MRP-S34) (S34mt) (T-complex expressed gene 2 protein)"
ruditapes2_c127	biological_process	other biological processes	P	"28S ribosomal protein S34, mitochondrial (MRP-S34) (S34mt) (T-complex expressed gene 2 protein)"
ruditapes_c19538	cell cycle	cell cycle and proliferation	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	meiosis	cell cycle and proliferation	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	DNA recombination	DNA metabolism	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	cell cycle checkpoint	cell cycle and proliferation	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	reciprocal meiotic recombination	cell cycle and proliferation	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	reciprocal meiotic recombination	DNA metabolism	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	regulation of mitotic recombination	DNA metabolism	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	telomere maintenance via telomerase	DNA metabolism	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	telomere maintenance via telomerase	cell organization and biogenesis	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	double-strand break repair	stress response	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	double-strand break repair	DNA metabolism	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	protein heterooligomerization	cell organization and biogenesis	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	response to DNA damage stimulus	stress response	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	telomere maintenance	DNA metabolism	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	telomere maintenance	cell organization and biogenesis	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	DNA repair	stress response	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c19538	DNA repair	DNA metabolism	P	DNA repair protein RAD50 (EC 3.6.-.-)
ruditapes_c13114	response to DNA damage stimulus	stress response	P	Putative DNA repair and recombination protein RAD26-like (EC 3.6.4.-)
ruditapes_c13114	DNA repair	stress response	P	Putative DNA repair and recombination protein RAD26-like (EC 3.6.4.-)
ruditapes_c13114	DNA repair	DNA metabolism	P	Putative DNA repair and recombination protein RAD26-like (EC 3.6.4.-)
ruditapes_c13114	biological_process	other biological processes	P	Putative DNA repair and recombination protein RAD26-like (EC 3.6.4.-)
ruditapes_c18417	"transcription, DNA-dependent"	RNA metabolism	P	Transducin-like enhancer protein 3 (rTLE3)
ruditapes_c18417	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transducin-like enhancer protein 3 (rTLE3)
ruditapes_c18417	Wnt receptor signaling pathway	signal transduction	P	Transducin-like enhancer protein 3 (rTLE3)
ruditapes_c10219	cytokinesis	other biological processes	P	Ras-related protein Ral-B
ruditapes_c10219	regulation of exocyst localization	other biological processes	P	Ras-related protein Ral-B
ruditapes_c10219	cell cycle	cell cycle and proliferation	P	Ras-related protein Ral-B
ruditapes_c10219	signal transduction	signal transduction	P	Ras-related protein Ral-B
ruditapes_c10219	cell division	other biological processes	P	Ras-related protein Ral-B
ruditapes_c10219	apoptosis	death	P	Ras-related protein Ral-B
ruditapes_c10219	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Ral-B
ruditapes_c10219	GTP catabolic process	other metabolic processes	P	Ras-related protein Ral-B
ruditapes_c10219	regulation of exocyst assembly	transport	P	Ras-related protein Ral-B
ruditapes_c10219	regulation of exocyst assembly	cell organization and biogenesis	P	Ras-related protein Ral-B
ruditapes2_c2497	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	Wnt receptor signaling pathway	signal transduction	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	chromatin modification	cell organization and biogenesis	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	negative regulation of apoptosis	death	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	Wnt receptor signaling pathway through beta-catenin	signal transduction	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	"transcription, DNA-dependent"	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	positive regulation of transcription from RNA polymerase III promoter	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	ATP-dependent chromatin remodeling	cell organization and biogenesis	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes2_c2497	in utero embryonic development	developmental processes	P	Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
ruditapes_c15192	response to UV-C	other biological processes	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	positive regulation of innate immune response	stress response	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	regulation of Fc receptor mediated stimulatory signaling pathway	signal transduction	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	acute-phase response	stress response	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	negative regulation of viral genome replication	other biological processes	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	apoptosis	death	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	immune response	other biological processes	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	defense response to virus	stress response	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	response to virus	other biological processes	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	phospholipid scrambling	cell organization and biogenesis	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	phosphatidylserine biosynthetic process	other metabolic processes	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	regulation of mast cell activation	other biological processes	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c15192	myeloid cell differentiation	developmental processes	P	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (NOR1) (TRA1)
ruditapes_c8527	membrane protein ectodomain proteolysis	protein metabolism	P	Endoplasmic reticulum aminopeptidase 1 (EC 3.4.11.-) (ARTS-1) (Adipocyte-derived leucine aminopeptidase) (A-LAP) (Aminopeptidase PILS) (Puromycin-insensitive leucyl-specific aminopeptidase) (PILS-AP)
ruditapes_c8527	metabolic process	other metabolic processes	P	Endoplasmic reticulum aminopeptidase 1 (EC 3.4.11.-) (ARTS-1) (Adipocyte-derived leucine aminopeptidase) (A-LAP) (Aminopeptidase PILS) (Puromycin-insensitive leucyl-specific aminopeptidase) (PILS-AP)
ruditapes_c8527	positive regulation of angiogenesis	developmental processes	P	Endoplasmic reticulum aminopeptidase 1 (EC 3.4.11.-) (ARTS-1) (Adipocyte-derived leucine aminopeptidase) (A-LAP) (Aminopeptidase PILS) (Puromycin-insensitive leucyl-specific aminopeptidase) (PILS-AP)
ruditapes_c8527	antigen processing and presentation	other biological processes	P	Endoplasmic reticulum aminopeptidase 1 (EC 3.4.11.-) (ARTS-1) (Adipocyte-derived leucine aminopeptidase) (A-LAP) (Aminopeptidase PILS) (Puromycin-insensitive leucyl-specific aminopeptidase) (PILS-AP)
ruditapes_c8527	proteolysis	protein metabolism	P	Endoplasmic reticulum aminopeptidase 1 (EC 3.4.11.-) (ARTS-1) (Adipocyte-derived leucine aminopeptidase) (A-LAP) (Aminopeptidase PILS) (Puromycin-insensitive leucyl-specific aminopeptidase) (PILS-AP)
ruditapes2_c4074	transport	transport	P	Kv channel-interacting protein 1 (KChIP1) (A-type potassium channel modulatory protein 1) (Potassium channel-interacting protein 1)
ruditapes2_c4074	potassium ion transport	transport	P	Kv channel-interacting protein 1 (KChIP1) (A-type potassium channel modulatory protein 1) (Potassium channel-interacting protein 1)
ruditapes2_c4074	positive regulation of action potential	other biological processes	P	Kv channel-interacting protein 1 (KChIP1) (A-type potassium channel modulatory protein 1) (Potassium channel-interacting protein 1)
ruditapes2_c4074	regulation of transmembrane ion transport	transport	P	Kv channel-interacting protein 1 (KChIP1) (A-type potassium channel modulatory protein 1) (Potassium channel-interacting protein 1)
ruditapes2_c4074	ion transport	transport	P	Kv channel-interacting protein 1 (KChIP1) (A-type potassium channel modulatory protein 1) (Potassium channel-interacting protein 1)
ruditapes_c25349	phosphorylation	other metabolic processes	P	Lymphokine-activated killer T-cell-originated protein kinase (EC 2.7.12.2) (PDZ-binding kinase) (T-LAK cell-originated protein kinase)
ruditapes_c25349	protein amino acid phosphorylation	protein metabolism	P	Lymphokine-activated killer T-cell-originated protein kinase (EC 2.7.12.2) (PDZ-binding kinase) (T-LAK cell-originated protein kinase)
ruditapes2_c1536	regulation of cell death	death	P	Nitric oxide-associated protein 1
ruditapes_c23915	regulation of cell death	death	P	Nitric oxide-associated protein 1
ruditapes2_c1536	mitochondrial translation	protein metabolism	P	Nitric oxide-associated protein 1
ruditapes2_c1536	mitochondrial translation	cell organization and biogenesis	P	Nitric oxide-associated protein 1
ruditapes2_c1536	apoptosis	death	P	Nitric oxide-associated protein 1
ruditapes_c23915	apoptosis	death	P	Nitric oxide-associated protein 1
ruditapes_c23915	mitochondrial translation	protein metabolism	P	Nitric oxide-associated protein 1
ruditapes_c23915	mitochondrial translation	cell organization and biogenesis	P	Nitric oxide-associated protein 1
ruditapes2_c1536	regulation of cellular respiration	other metabolic processes	P	Nitric oxide-associated protein 1
ruditapes_c23915	regulation of cellular respiration	other metabolic processes	P	Nitric oxide-associated protein 1
ruditapes_c20423	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10)
ruditapes_c20423	positive regulation of glucose import	transport	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10)
ruditapes_c20423	positive regulation of filopodium assembly	cell organization and biogenesis	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10)
ruditapes_c20423	cortical actin cytoskeleton organization	cell organization and biogenesis	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10)
ruditapes_c20423	regulation of cell shape	cell organization and biogenesis	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10)
ruditapes_c20423	GTP catabolic process	other metabolic processes	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10)
ruditapes_c20423	insulin receptor signaling pathway	signal transduction	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10)
ruditapes_c20423	small GTPase mediated signal transduction	signal transduction	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10)
ruditapes_c20423	cellular response to insulin stimulus	other biological processes	P	Rho-related GTP-binding protein RhoQ (Ras-like protein TC10)
ruditapes_c1795	lipid metabolic process	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c29733	digestion	other biological processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c1795	digestion	other biological processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c29733	steroid metabolic process	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c29733	oxidation reduction	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c1795	steroid metabolic process	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c29733	bile acid biosynthetic process	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c29733	lipid metabolic process	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c1795	bile acid biosynthetic process	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c29733	cholesterol catabolic process	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c1795	bile acid catabolic process	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c1795	oxidation reduction	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c1795	cholesterol catabolic process	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes_c29733	bile acid catabolic process	other metabolic processes	P	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.13.99) (Cytochrome P450 39A1) (mCYP39A1) (Oxysterol 7-alpha-hydroxylase)
ruditapes2_c1814	skeletal muscle tissue development	developmental processes	P	Muscleblind-like protein 1 (Triplet-expansion RNA-binding protein)
ruditapes2_c1814	in utero embryonic development	developmental processes	P	Muscleblind-like protein 1 (Triplet-expansion RNA-binding protein)
ruditapes2_c1814	RNA splicing	RNA metabolism	P	Muscleblind-like protein 1 (Triplet-expansion RNA-binding protein)
ruditapes2_c1814	myoblast differentiation	developmental processes	P	Muscleblind-like protein 1 (Triplet-expansion RNA-binding protein)
ruditapes2_c1814	embryonic limb morphogenesis	developmental processes	P	Muscleblind-like protein 1 (Triplet-expansion RNA-binding protein)
ruditapes2_c1814	nervous system development	developmental processes	P	Muscleblind-like protein 1 (Triplet-expansion RNA-binding protein)
ruditapes2_c1814	"regulation of alternative nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Muscleblind-like protein 1 (Triplet-expansion RNA-binding protein)
ruditapes2_c1814	mRNA processing	RNA metabolism	P	Muscleblind-like protein 1 (Triplet-expansion RNA-binding protein)
ruditapes2_c1814	mRNA splice site selection	RNA metabolism	P	Muscleblind-like protein 1 (Triplet-expansion RNA-binding protein)
ruditapes2_c1814	mRNA splice site selection	cell organization and biogenesis	P	Muscleblind-like protein 1 (Triplet-expansion RNA-binding protein)
ruditapes2_c1814	regulation of RNA splicing	RNA metabolism	P	Muscleblind-like protein 1 (Triplet-expansion RNA-binding protein)
ruditapes_c24118	cytoskeleton organization	cell organization and biogenesis	P	Protein piccolo (Aczonin) (Multidomain presynaptic cytomatrix protein)
ruditapes_c24118	synaptic vesicle targeting	transport	P	Protein piccolo (Aczonin) (Multidomain presynaptic cytomatrix protein)
ruditapes_c24118	synaptic vesicle targeting	cell-cell signaling	P	Protein piccolo (Aczonin) (Multidomain presynaptic cytomatrix protein)
ruditapes_c30281	response to stimulus	other biological processes	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c30281	signal transduction	signal transduction	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c9855	signal transduction	signal transduction	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c9855	response to stimulus	other biological processes	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c30281	biological_process	other biological processes	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c30281	sensory perception of taste	other biological processes	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c9855	detection of chemical stimulus involved in sensory perception of taste	other biological processes	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c9855	biological_process	other biological processes	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c9855	sensory perception of taste	other biological processes	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c30281	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c30281	detection of chemical stimulus involved in sensory perception of taste	other biological processes	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c9855	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 2 member 13 (T2R13) (Taste receptor type 2 member 7) (T2R7)
ruditapes_c21444	response to stimulus	other biological processes	P	Taste receptor type 2 member 114 (T2R114) (Taste receptor type 2 member 5) (T2R5)
ruditapes_c21444	G-protein coupled receptor protein signaling pathway	signal transduction	P	Taste receptor type 2 member 114 (T2R114) (Taste receptor type 2 member 5) (T2R5)
ruditapes_c21444	sensory perception of taste	other biological processes	P	Taste receptor type 2 member 114 (T2R114) (Taste receptor type 2 member 5) (T2R5)
ruditapes_c21444	signal transduction	signal transduction	P	Taste receptor type 2 member 114 (T2R114) (Taste receptor type 2 member 5) (T2R5)
ruditapes_c21444	detection of chemical stimulus involved in sensory perception of taste	other biological processes	P	Taste receptor type 2 member 114 (T2R114) (Taste receptor type 2 member 5) (T2R5)
ruditapes_c21444	biological_process	other biological processes	P	Taste receptor type 2 member 114 (T2R114) (Taste receptor type 2 member 5) (T2R5)
ruditapes_c9313	actin cytoskeleton organization	cell organization and biogenesis	P	Formin-2
ruditapes_c9313	polar body extrusion after meiotic divisions	cell cycle and proliferation	P	Formin-2
ruditapes_c9313	multicellular organismal development	developmental processes	P	Formin-2
ruditapes_c9313	oogenesis	other biological processes	P	Formin-2
ruditapes_c9313	meiotic metaphase I	cell cycle and proliferation	P	Formin-2
ruditapes_c9313	establishment of meiotic spindle localization	cell cycle and proliferation	P	Formin-2
ruditapes_c9313	establishment of meiotic spindle localization	cell organization and biogenesis	P	Formin-2
ruditapes_c9313	meiotic chromosome movement towards spindle pole	cell cycle and proliferation	P	Formin-2
ruditapes_c9313	cellular component organization	cell organization and biogenesis	P	Formin-2
ruditapes_c5643	proteolysis	protein metabolism	P	Cathepsin M (EC 3.4.22.-)
ruditapes_c8547	protein homotrimerization	cell organization and biogenesis	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c8547	receptor-mediated endocytosis	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c8547	receptor-mediated endocytosis	cell organization and biogenesis	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c8547	transport	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	hemoglobin import	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	lipoprotein transport	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	receptor-mediated endocytosis	cell organization and biogenesis	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	cholesterol metabolic process	other metabolic processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c8547	response to nutrient	other biological processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	lipid metabolic process	other metabolic processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c8547	steroid metabolic process	other metabolic processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	cholesterol metabolic process	other metabolic processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	in utero embryonic development	developmental processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c8547	protein transport	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c8547	lipoprotein transport	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	transport	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	protein homotrimerization	cell organization and biogenesis	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	receptor-mediated endocytosis	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	in utero embryonic development	developmental processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	receptor-mediated endocytosis	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	receptor-mediated endocytosis	cell organization and biogenesis	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	protein homotrimerization	cell organization and biogenesis	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	transport	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c8547	hemoglobin import	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	response to nutrient	other biological processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c8547	lipid metabolic process	other metabolic processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	steroid metabolic process	other metabolic processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	hemoglobin import	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	lipoprotein transport	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	lipid metabolic process	other metabolic processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c8547	in utero embryonic development	developmental processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	protein transport	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	response to nutrient	other biological processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c8547	cholesterol metabolic process	other metabolic processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c21961	steroid metabolic process	other metabolic processes	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c5447	protein transport	transport	P	Cubilin (Intrinsic factor-cobalamin receptor)
ruditapes_c30414	biological_process	other biological processes	P	Squamous cell carcinoma antigen recognized by T-cells 3 (SART-3) (mSART-3) (Tumor-rejection antigen SART3)
ruditapes_c30414	RNA processing	RNA metabolism	P	Squamous cell carcinoma antigen recognized by T-cells 3 (SART-3) (mSART-3) (Tumor-rejection antigen SART3)
ruditapes_c3702	biological_process	other biological processes	P	Erythroid membrane-associated protein
ruditapes_c15794	response to stress	stress response	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	positive regulation of JNK cascade	signal transduction	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	positive regulation of JNK cascade	stress response	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	regulation of cell shape	cell organization and biogenesis	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	positive regulation of stress-activated MAPK cascade	stress response	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	activation of MAPKK activity	signal transduction	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	activation of MAPKK activity	protein metabolism	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	stress-activated MAPK cascade	signal transduction	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	stress-activated MAPK cascade	stress response	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	positive regulation of stress-activated MAPK cascade	signal transduction	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	G2/M transition DNA damage checkpoint	cell cycle and proliferation	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	G2/M transition DNA damage checkpoint	signal transduction	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	G2/M transition DNA damage checkpoint	stress response	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	actin cytoskeleton organization	cell organization and biogenesis	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	focal adhesion formation	cell adhesion	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c15794	focal adhesion formation	cell organization and biogenesis	P	Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand and one amino acid protein 2)
ruditapes_c28359	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 SUMO-protein ligase PIAS4 (EC 6.3.2.-) (PIASy) (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS-gamma)
ruditapes_c28359	positive regulation of protein sumoylation	protein metabolism	P	E3 SUMO-protein ligase PIAS4 (EC 6.3.2.-) (PIASy) (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS-gamma)
ruditapes_c28359	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 SUMO-protein ligase PIAS4 (EC 6.3.2.-) (PIASy) (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS-gamma)
ruditapes_c28359	Wnt receptor signaling pathway	signal transduction	P	E3 SUMO-protein ligase PIAS4 (EC 6.3.2.-) (PIASy) (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS-gamma)
ruditapes_c28359	positive regulation of apoptosis	death	P	E3 SUMO-protein ligase PIAS4 (EC 6.3.2.-) (PIASy) (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS-gamma)
ruditapes_c28359	negative regulation of NF-kappaB transcription factor activity	RNA metabolism	P	E3 SUMO-protein ligase PIAS4 (EC 6.3.2.-) (PIASy) (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS-gamma)
ruditapes_c28359	interspecies interaction between organisms	other biological processes	P	E3 SUMO-protein ligase PIAS4 (EC 6.3.2.-) (PIASy) (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS-gamma)
ruditapes_c28359	"transcription, DNA-dependent"	RNA metabolism	P	E3 SUMO-protein ligase PIAS4 (EC 6.3.2.-) (PIASy) (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS-gamma)
ruditapes_c28359	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	E3 SUMO-protein ligase PIAS4 (EC 6.3.2.-) (PIASy) (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS-gamma)
ruditapes_c28359	protein sumoylation	protein metabolism	P	E3 SUMO-protein ligase PIAS4 (EC 6.3.2.-) (PIASy) (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS-gamma)
ruditapes_c28359	multicellular organismal development	developmental processes	P	E3 SUMO-protein ligase PIAS4 (EC 6.3.2.-) (PIASy) (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS-gamma)
ruditapes_c8219	positive regulation of tyrosine phosphorylation of Stat3 protein	signal transduction	P	Cytokine receptor-like factor 1 (Cytokine receptor-like molecule 3) (CRLM-3) (Cytokine-like factor 1) (CLF-1) (Novel cytokine receptor 6) (NR6)
ruditapes_c8219	positive regulation of tyrosine phosphorylation of Stat3 protein	protein metabolism	P	Cytokine receptor-like factor 1 (Cytokine receptor-like molecule 3) (CRLM-3) (Cytokine-like factor 1) (CLF-1) (Novel cytokine receptor 6) (NR6)
ruditapes_c8219	ureteric bud development	developmental processes	P	Cytokine receptor-like factor 1 (Cytokine receptor-like molecule 3) (CRLM-3) (Cytokine-like factor 1) (CLF-1) (Novel cytokine receptor 6) (NR6)
ruditapes_c8219	positive regulation of cell proliferation	cell cycle and proliferation	P	Cytokine receptor-like factor 1 (Cytokine receptor-like molecule 3) (CRLM-3) (Cytokine-like factor 1) (CLF-1) (Novel cytokine receptor 6) (NR6)
ruditapes_c8219	negative regulation of neuron apoptosis	death	P	Cytokine receptor-like factor 1 (Cytokine receptor-like molecule 3) (CRLM-3) (Cytokine-like factor 1) (CLF-1) (Novel cytokine receptor 6) (NR6)
ruditapes_c8164	biological_process	other biological processes	P	Thrombospondin type-1 domain-containing protein 1 (Transmembrane molecule with thrombospondin module)
ruditapes_c2646	regulation of actin filament polymerization	protein metabolism	P	Actin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c2646	regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c8613	regulation of chemotaxis	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.4.19.12) (Deubiquitinating enzyme 14) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14)
ruditapes_c8613	negative regulation of endopeptidase activity	other biological processes	P	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.4.19.12) (Deubiquitinating enzyme 14) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14)
ruditapes_c8613	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.4.19.12) (Deubiquitinating enzyme 14) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14)
ruditapes_c8613	synaptic transmission	cell-cell signaling	P	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.4.19.12) (Deubiquitinating enzyme 14) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14)
ruditapes_c8613	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.4.19.12) (Deubiquitinating enzyme 14) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14)
ruditapes_c29598	signal transduction	signal transduction	P	G kinase-anchoring protein 1 (cGMP-dependent protein kinase-anchoring protein of 42 kDa)
ruditapes_c29598	"G-protein signaling, coupled to cGMP nucleotide second messenger"	signal transduction	P	G kinase-anchoring protein 1 (cGMP-dependent protein kinase-anchoring protein of 42 kDa)
ruditapes_c30676	embryonic viscerocranium morphogenesis	developmental processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	carbohydrate metabolic process	other metabolic processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	embryonic digit morphogenesis	developmental processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	chondroitin sulfate biosynthetic process	other metabolic processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	carbohydrate biosynthetic process	other metabolic processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	embryonic limb morphogenesis	developmental processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	developmental growth	other biological processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	cartilage development	developmental processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	tail morphogenesis	other biological processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	post-embryonic development	developmental processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	negative regulation of apoptosis	death	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	chondroitin sulfate metabolic process	other metabolic processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	negative regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	chondrocyte development	developmental processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	respiratory gaseous exchange	other biological processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	embryonic skeletal system morphogenesis	developmental processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	regulation of cell proliferation	cell cycle and proliferation	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_c30676	polysaccharide localization	other biological processes	P	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)
ruditapes_s38004	biotin biosynthetic process	other metabolic processes	P	Pimelyl-[acyl-carrier protein] methyl ester esterase (EC 3.1.1.85) (Biotin synthesis protein BioH) (Carboxylesterase BioH)
ruditapes_c32094	glycolysis	other metabolic processes	P	Glucose-6-phosphate isomerase 2 (GPI 2) (EC 5.3.1.9) (Phosphoglucose isomerase 2) (PGI 2) (Phosphohexose isomerase 2) (PHI 2)
ruditapes_c32094	gluconeogenesis	other metabolic processes	P	Glucose-6-phosphate isomerase 2 (GPI 2) (EC 5.3.1.9) (Phosphoglucose isomerase 2) (PGI 2) (Phosphohexose isomerase 2) (PHI 2)
ruditapes_c17659	cellular amino acid biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c17659	aromatic amino acid family biosynthetic process	other metabolic processes	P	3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)
ruditapes_c29453	translation	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_c29453	GTP catabolic process	other metabolic processes	P	Peptide chain release factor 3 (RF-3)
ruditapes_c29453	translational termination	protein metabolism	P	Peptide chain release factor 3 (RF-3)
ruditapes_c29453	translational termination	cell organization and biogenesis	P	Peptide chain release factor 3 (RF-3)
ruditapes_c12169	protein insertion into membrane	cell organization and biogenesis	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c12169	protein transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c12169	transport	transport	P	Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC)
ruditapes_c23008	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c23008	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c23008	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c23008	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c23008	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_lrc38423	cell cycle	cell cycle and proliferation	P	Isoprenyl transferase (EC 2.5.1.-)
ruditapes_lrc38423	regulation of cell shape	cell organization and biogenesis	P	Isoprenyl transferase (EC 2.5.1.-)
ruditapes_lrc38423	peptidoglycan biosynthetic process	other metabolic processes	P	Isoprenyl transferase (EC 2.5.1.-)
ruditapes_lrc38423	cell wall organization	cell organization and biogenesis	P	Isoprenyl transferase (EC 2.5.1.-)
ruditapes_lrc38423	cell division	other biological processes	P	Isoprenyl transferase (EC 2.5.1.-)
ruditapes_c18106	cell cycle	cell cycle and proliferation	P	Probable GTP-binding protein EngB
ruditapes_c18106	cell division	other biological processes	P	Probable GTP-binding protein EngB
ruditapes_c18106	barrier septum formation	cell organization and biogenesis	P	Probable GTP-binding protein EngB
ruditapes_c29170	proteolysis	protein metabolism	P	Proline iminopeptidase (PIP) (EC 3.4.11.5) (Prolyl aminopeptidase) (PAP)
ruditapes_c12400	tetrapyrrole biosynthetic process	other metabolic processes	P	Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c12400	peptidyl-pyrromethane cofactor linkage	protein metabolism	P	Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c12400	porphyrin biosynthetic process	other metabolic processes	P	Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)
ruditapes_c13293	tRNA aminoacylation for protein translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c13293	tRNA aminoacylation for protein translation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c13293	methionyl-tRNA aminoacylation	RNA metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c13293	translation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_c13293	methionyl-tRNA aminoacylation	protein metabolism	P	Methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)
ruditapes_lrc19177	ion transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_lrc19177	ATP biosynthetic process	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_lrc19177	transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_lrc19177	proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_lrc19177	ATP synthesis coupled proton transport	transport	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_lrc19177	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase subunit delta (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (F-ATPase subunit delta)
ruditapes_s38217	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphatase (HolPase) (EC 3.1.3.15)
ruditapes_lrc39503	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphatase (HolPase) (EC 3.1.3.15)
ruditapes2_lrc3326	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphatase (HolPase) (EC 3.1.3.15)
ruditapes2_lrc3326	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphatase (HolPase) (EC 3.1.3.15)
ruditapes_s33962	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphatase (HolPase) (EC 3.1.3.15)
ruditapes_s33962	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphatase (HolPase) (EC 3.1.3.15)
ruditapes2_c953	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphatase (HolPase) (EC 3.1.3.15)
ruditapes2_c953	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol-phosphatase (HolPase) (EC 3.1.3.15)
ruditapes_s38217	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphatase (HolPase) (EC 3.1.3.15)
ruditapes_lrc39503	histidine biosynthetic process	other metabolic processes	P	Histidinol-phosphatase (HolPase) (EC 3.1.3.15)
ruditapes_c20573	protein folding	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c20573	protein peptidyl-prolyl isomerization	protein metabolism	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c20573	protein transport	transport	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c20573	cell cycle	cell cycle and proliferation	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c20573	cell division	other biological processes	P	Trigger factor (TF) (EC 5.2.1.8) (PPIase)
ruditapes_c21141	carbohydrate metabolic process	other metabolic processes	P	"Oligo-1,6-glucosidase (EC 3.2.1.10) (Dextrin 6-alpha-D-glucanohydrolase) (Oligosaccharide alpha-1,6-glucosidase) (Sucrase-isomaltase) (Isomaltase)"
ruditapes_c21141	metabolic process	other metabolic processes	P	"Oligo-1,6-glucosidase (EC 3.2.1.10) (Dextrin 6-alpha-D-glucanohydrolase) (Oligosaccharide alpha-1,6-glucosidase) (Sucrase-isomaltase) (Isomaltase)"
ruditapes2_c1517	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Arginine repressor
ruditapes2_c1517	"transcription, DNA-dependent"	RNA metabolism	P	Arginine repressor
ruditapes2_c1517	cellular amino acid biosynthetic process	other metabolic processes	P	Arginine repressor
ruditapes2_c1517	arginine metabolic process	other metabolic processes	P	Arginine repressor
ruditapes2_c1517	arginine biosynthetic process	other metabolic processes	P	Arginine repressor
ruditapes2_c1517	protein oligomerization	cell organization and biogenesis	P	Arginine repressor
ruditapes_c30152	two-component signal transduction system (phosphorelay)	signal transduction	P	Probable C4-dicarboxylate response regulator DctR
ruditapes_c30152	response to external stimulus	other biological processes	P	Probable C4-dicarboxylate response regulator DctR
ruditapes_c30152	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Probable C4-dicarboxylate response regulator DctR
ruditapes_c30152	"transcription, DNA-dependent"	RNA metabolism	P	Probable C4-dicarboxylate response regulator DctR
ruditapes2_c1701	lysine biosynthetic process	other metabolic processes	P	N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase (EC 3.5.1.-) (Amidohydrolase) (Formylaminopyrimidine deformylase)
ruditapes2_c1701	metabolic process	other metabolic processes	P	N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase (EC 3.5.1.-) (Amidohydrolase) (Formylaminopyrimidine deformylase)
ruditapes_c4713	proteolysis	protein metabolism	P	Lipoprotein signal peptidase (EC 3.4.23.36) (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)
ruditapes_c5349	DNA topological change	DNA metabolism	P	DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) (Omega-protein) (Relaxing enzyme) (Swivelase) (Untwisting enzyme)
ruditapes_c23173	isoprenoid biosynthetic process	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c23173	oxidation reduction	other metabolic processes	P	1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase)
ruditapes_c13909	metabolic process	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c13909	oxidation reduction	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c13909	tricarboxylic acid cycle	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c13909	glycolysis	other metabolic processes	P	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
ruditapes_c11185	phospholipid biosynthetic process	other metabolic processes	P	Glycerol-3-phosphate acyltransferase (Acyl-PO4 G3P acyltransferase) (Acyl-phosphate--glycerol-3-phosphate acyltransferase) (G3P acyltransferase) (GPAT) (EC 2.3.1.n3) (Lysophosphatidic acid synthase) (LPA synthase)
ruditapes_c15594	peptidoglycan biosynthetic process	other metabolic processes	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c15594	regulation of cell shape	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c15594	cell wall organization	cell organization and biogenesis	P	D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)
ruditapes_c5935	metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c5935	carbohydrate phosphorylation	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c5935	galactose metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c5935	phosphorylation	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c5935	carbohydrate metabolic process	other metabolic processes	P	Galactokinase (EC 2.7.1.6) (Galactose kinase)
ruditapes_c15905	protein amino acid deacetylation	protein metabolism	P	NAD-dependent protein deacetylase (EC 3.5.1.-) (Regulatory protein SIR2 homolog)
ruditapes_c23957	DNA replication	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c23957	response to DNA damage stimulus	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c23957	DNA repair	stress response	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_c23957	DNA repair	DNA metabolism	P	DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)])
ruditapes_s33238	phosphonate transport	transport	P	Phosphonates import ATP-binding protein PhnC 1 (EC 3.6.3.28)
ruditapes_s33238	ATP catabolic process	other metabolic processes	P	Phosphonates import ATP-binding protein PhnC 1 (EC 3.6.3.28)
ruditapes_s33238	transport	transport	P	Phosphonates import ATP-binding protein PhnC 1 (EC 3.6.3.28)
ruditapes_c16530	biosynthetic process	other metabolic processes	P	Uncharacterized isomerase VC
ruditapes2_c1937	metabolic process	other metabolic processes	P	Probable aromatic acid decarboxylase (EC 4.1.1.-)
ruditapes_c25603	nitrogen compound metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes_c25603	metabolic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes_c25603	cellular amino acid biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes_c25603	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes_c25603	arginine biosynthetic process	other metabolic processes	P	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
ruditapes_lrc30773	DNA topological change	DNA metabolism	P	DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) (Omega-protein) (Relaxing enzyme) (Swivelase) (Untwisting enzyme)
ruditapes_lrc36841	rRNA methylation	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_lrc36841	rRNA processing	RNA metabolism	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_lrc36841	methylation	other metabolic processes	P	Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase (EC 2.1.1.173) (rRNA (guanine-N(2)-)-methyltransferase RlmL); 23S rRNA m7G2069 methyltransferase (EC 2.1.1.264) (rRNA (guanine-N(7)-)-methyltransferase RlmK)]
ruditapes_s38151	methionine transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_s38151	amino acid transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_s38151	D-methionine transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_s38151	ATP catabolic process	other metabolic processes	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_s38151	transport	transport	P	Methionine import ATP-binding protein MetN (EC 3.6.3.-)
ruditapes_c18361	response to antibiotic	other biological processes	P	Penicillin-binding protein 1B (PBP-1b) (PBP1b) (Murein polymerase) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.1.129) (Peptidoglycan TGase) (Peptidoglycan glycosyltransferase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c18361	regulation of cell shape	cell organization and biogenesis	P	Penicillin-binding protein 1B (PBP-1b) (PBP1b) (Murein polymerase) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.1.129) (Peptidoglycan TGase) (Peptidoglycan glycosyltransferase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c18361	peptidoglycan biosynthetic process	other metabolic processes	P	Penicillin-binding protein 1B (PBP-1b) (PBP1b) (Murein polymerase) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.1.129) (Peptidoglycan TGase) (Peptidoglycan glycosyltransferase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c18361	peptidoglycan-based cell wall biogenesis	other biological processes	P	Penicillin-binding protein 1B (PBP-1b) (PBP1b) (Murein polymerase) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.1.129) (Peptidoglycan TGase) (Peptidoglycan glycosyltransferase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c18361	cell wall organization	cell organization and biogenesis	P	Penicillin-binding protein 1B (PBP-1b) (PBP1b) (Murein polymerase) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.1.129) (Peptidoglycan TGase) (Peptidoglycan glycosyltransferase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c18361	metabolic process	other metabolic processes	P	Penicillin-binding protein 1B (PBP-1b) (PBP1b) (Murein polymerase) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.1.129) (Peptidoglycan TGase) (Peptidoglycan glycosyltransferase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
ruditapes_c25905	aromatic compound catabolic process	other metabolic processes	P	2-aminomuconic 6-semialdehyde dehydrogenase (EC 1.2.1.32) (Aminomuconate-semialdehyde dehydrogenase)
ruditapes_c25905	metabolic process	other metabolic processes	P	2-aminomuconic 6-semialdehyde dehydrogenase (EC 1.2.1.32) (Aminomuconate-semialdehyde dehydrogenase)
ruditapes_c25905	oxidation reduction	other metabolic processes	P	2-aminomuconic 6-semialdehyde dehydrogenase (EC 1.2.1.32) (Aminomuconate-semialdehyde dehydrogenase)
ruditapes_c28966	pyrimidine nucleotide biosynthetic process	other metabolic processes	P	Dihydroorotase (DHOase) (EC 3.5.2.3)
ruditapes2_c390	"transcription, DNA-dependent"	RNA metabolism	P	Small neutral protease regulatory protein
ruditapes2_c390	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Small neutral protease regulatory protein
ruditapes_c30320	DNA recombination	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c30320	response to DNA damage stimulus	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c30320	regulation of ARF GTPase activity	signal transduction	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c30320	DNA repair	stress response	P	DNA repair protein RecO (Recombination protein O)
ruditapes_c30320	DNA repair	DNA metabolism	P	DNA repair protein RecO (Recombination protein O)
ruditapes2_c3200	regulation of translational fidelity	protein metabolism	P	Prolyl-tRNA editing protein ProX (Prolyl-tRNA deacylase ProX)
ruditapes2_c1059	regulation of translational fidelity	protein metabolism	P	Prolyl-tRNA editing protein ProX (Prolyl-tRNA deacylase ProX)
ruditapes2_c1416	photosynthesis	other metabolic processes	P	Cytochrome b6
ruditapes2_c1416	electron transport chain	other metabolic processes	P	Cytochrome b6
ruditapes2_c1416	respiratory electron transport chain	other metabolic processes	P	Cytochrome b6
ruditapes2_c1416	transport	transport	P	Cytochrome b6
ruditapes_c25066	oxidation reduction	other metabolic processes	P	Anaerobic ribonucleoside-triphosphate reductase (EC 1.17.4.2)
ruditapes_c25066	metabolic process	other metabolic processes	P	Anaerobic ribonucleoside-triphosphate reductase (EC 1.17.4.2)
ruditapes2_c2193	electron transport chain	other metabolic processes	P	Disulfide bond formation protein B (Disulfide oxidoreductase)
ruditapes2_c2193	transport	transport	P	Disulfide bond formation protein B (Disulfide oxidoreductase)
ruditapes2_c2193	oxidation reduction	other metabolic processes	P	Disulfide bond formation protein B (Disulfide oxidoreductase)
ruditapes_c16590	protein secretion	transport	P	UPF0194 membrane protein in asrC 5'region (ORF1) (Fragment)
ruditapes_c16590	transmembrane transport	transport	P	UPF0194 membrane protein in asrC 5'region (ORF1) (Fragment)
ruditapes_c31755	"posttranslational protein targeting to membrane, translocation"	transport	P	"Beta-(1,2)-xylosyltransferase (EC 2.4.2.38)"
ruditapes_c31755	protein amino acid N-linked glycosylation	protein metabolism	P	"Beta-(1,2)-xylosyltransferase (EC 2.4.2.38)"
ruditapes2_c1463	protein amino acid phosphorylation	protein metabolism	P	Putative cysteine-rich receptor-like protein kinase 30 (Cysteine-rich RLK30) (EC 2.7.11.-)
ruditapes2_c1463	phosphorylation	other metabolic processes	P	Putative cysteine-rich receptor-like protein kinase 30 (Cysteine-rich RLK30) (EC 2.7.11.-)
ruditapes_lrc35666	biological_process	other biological processes	P	Probable calcium-binding protein CML27 (Calmodulin-like protein 27)
ruditapes_c9590	hydrogen peroxide catabolic process	stress response	P	Peroxidase 15 (Prx15) (EC 1.11.1.7) (Anionic peroxidase)
ruditapes_c9590	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidase 15 (Prx15) (EC 1.11.1.7) (Anionic peroxidase)
ruditapes_c9590	oxidation reduction	other metabolic processes	P	Peroxidase 15 (Prx15) (EC 1.11.1.7) (Anionic peroxidase)
ruditapes_c9590	response to oxidative stress	stress response	P	Peroxidase 15 (Prx15) (EC 1.11.1.7) (Anionic peroxidase)
ruditapes_c29889	methylation	other metabolic processes	P	(RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128) (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT)
ruditapes_c28710	cell wall organization	cell organization and biogenesis	P	Probable mannan synthase 11 (EC 2.4.1.-) (Cellulose synthase-like protein A11) (AtCslA11)
ruditapes_lrc33950	transport	transport	P	ABC transporter G family member 20 (ABC transporter ABCG.20) (AtABCG20) (Probable white-brown complex homolog protein 20) (AtWBC20)
ruditapes_lrc33950	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 20 (ABC transporter ABCG.20) (AtABCG20) (Probable white-brown complex homolog protein 20) (AtWBC20)
ruditapes_c19607	metabolic process	other metabolic processes	P	UDP-glycosyltransferase 78D4 (EC 2.4.1.-)
ruditapes_c20273	calcium ion transport	transport	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes_c20273	transport	transport	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes_c7086	ionotropic glutamate receptor signaling pathway	signal transduction	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes_c7086	transport	transport	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes_c20273	transmembrane calcium ion transport	transport	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes_c7086	ion transport	transport	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes_c7086	transmembrane calcium ion transport	transport	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes_c20273	ion transport	transport	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes_c7086	calcium ion transport	transport	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes_c20273	calcium-mediated signaling	signal transduction	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes_c20273	ionotropic glutamate receptor signaling pathway	signal transduction	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes_c7086	calcium-mediated signaling	signal transduction	P	Glutamate receptor 2.6 (Ligand-gated ion channel 2.6)
ruditapes2_lrc6008	methylation	other metabolic processes	P	"Probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 (EC 2.1.1.216) (tRNA 2,2-dimethylguanosine-26 methyltransferase 1) (tRNA(guanine-26,N(2)-N(2)) methyltransferase 1) (tRNA(m(2,2)G26)dimethyltransferase 1)"
ruditapes2_lrc6008	tRNA processing	RNA metabolism	P	"Probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 (EC 2.1.1.216) (tRNA 2,2-dimethylguanosine-26 methyltransferase 1) (tRNA(guanine-26,N(2)-N(2)) methyltransferase 1) (tRNA(m(2,2)G26)dimethyltransferase 1)"
ruditapes_c14738	biological_process	other biological processes	P	Putative F-box protein At5g15660
ruditapes_c11110	transport	transport	P	Organic cation/carnitine transporter 4 (AtOCT4)
ruditapes_c11110	transmembrane transport	transport	P	Organic cation/carnitine transporter 4 (AtOCT4)
ruditapes_c11110	cellular response to water deprivation	stress response	P	Organic cation/carnitine transporter 4 (AtOCT4)
ruditapes_c11110	ion transport	transport	P	Organic cation/carnitine transporter 4 (AtOCT4)
ruditapes_c19548	oxidation reduction	other metabolic processes	P	Clavaminate synthase-like protein At3g21360 (EC 1.-.-.-)
ruditapes_c22024	iron-sulfur cluster assembly	other metabolic processes	P	"NifU-like protein 4, mitochondrial (AtNfu-III) (AtNfu4)"
ruditapes_s37602	biological_process	other biological processes	P	Calmodulin-like protein 11
ruditapes2_c3996	biological_process	other biological processes	P	Putative F-box protein At3g21130
ruditapes_c18690	biological_process	other biological processes	P	Putative F-box protein At3g21120
ruditapes_c21097	defense response to bacterium	stress response	P	GDSL esterase/lipase ESM1 (EC 3.1.1.-) (Extracellular lipase ESM1) (Protein EPITHIOSPECIFIER MODIFIER 1) (AtESM1)
ruditapes_c21097	lipid metabolic process	other metabolic processes	P	GDSL esterase/lipase ESM1 (EC 3.1.1.-) (Extracellular lipase ESM1) (Protein EPITHIOSPECIFIER MODIFIER 1) (AtESM1)
ruditapes_c21097	glucosinolate catabolic process	other metabolic processes	P	GDSL esterase/lipase ESM1 (EC 3.1.1.-) (Extracellular lipase ESM1) (Protein EPITHIOSPECIFIER MODIFIER 1) (AtESM1)
ruditapes_c21097	lipid catabolic process	other metabolic processes	P	GDSL esterase/lipase ESM1 (EC 3.1.1.-) (Extracellular lipase ESM1) (Protein EPITHIOSPECIFIER MODIFIER 1) (AtESM1)
ruditapes_c21097	response to cold	stress response	P	GDSL esterase/lipase ESM1 (EC 3.1.1.-) (Extracellular lipase ESM1) (Protein EPITHIOSPECIFIER MODIFIER 1) (AtESM1)
ruditapes_c21097	response to insect	other biological processes	P	GDSL esterase/lipase ESM1 (EC 3.1.1.-) (Extracellular lipase ESM1) (Protein EPITHIOSPECIFIER MODIFIER 1) (AtESM1)
ruditapes_c8006	cell wall organization	cell organization and biogenesis	P	Xyloglucan glycosyltransferase 4 (EC 2.4.1.-) (Cellulose synthase-like protein C4) (AtCslC4) (Xyloglucan synthase 4)
ruditapes_c28640	transport	transport	P	Transmembrane emp24 domain-containing protein p24delta11 (p24 family protein delta11) (p24delta11) (p24 family protein delta2e) (p24delta2e)
ruditapes_c12369	biological_process	other biological processes	P	F-box protein At3g27290
ruditapes_c20768	"RNA interference, production of siRNA"	RNA metabolism	P	DNA-directed RNA polymerase D subunit 2a (AtNRPD2a) (Nuclear RNA polymerase D 2a) (EC 2.7.7.6) (Nuclear RNA polymerase E 2) (Protein DEFECTIVE IN MERISTEM SILENCING 2) (Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 2) (RNA polymerase IV subunit 2a) (POL IV 2a)
ruditapes_c20768	DNA methylation	DNA metabolism	P	DNA-directed RNA polymerase D subunit 2a (AtNRPD2a) (Nuclear RNA polymerase D 2a) (EC 2.7.7.6) (Nuclear RNA polymerase E 2) (Protein DEFECTIVE IN MERISTEM SILENCING 2) (Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 2) (RNA polymerase IV subunit 2a) (POL IV 2a)
ruditapes_c20768	posttranscriptional gene silencing by RNA	other metabolic processes	P	DNA-directed RNA polymerase D subunit 2a (AtNRPD2a) (Nuclear RNA polymerase D 2a) (EC 2.7.7.6) (Nuclear RNA polymerase E 2) (Protein DEFECTIVE IN MERISTEM SILENCING 2) (Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 2) (RNA polymerase IV subunit 2a) (POL IV 2a)
ruditapes_c20768	"regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase D subunit 2a (AtNRPD2a) (Nuclear RNA polymerase D 2a) (EC 2.7.7.6) (Nuclear RNA polymerase E 2) (Protein DEFECTIVE IN MERISTEM SILENCING 2) (Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 2) (RNA polymerase IV subunit 2a) (POL IV 2a)
ruditapes_c20768	gene silencing by RNA	other metabolic processes	P	DNA-directed RNA polymerase D subunit 2a (AtNRPD2a) (Nuclear RNA polymerase D 2a) (EC 2.7.7.6) (Nuclear RNA polymerase E 2) (Protein DEFECTIVE IN MERISTEM SILENCING 2) (Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 2) (RNA polymerase IV subunit 2a) (POL IV 2a)
ruditapes_c20768	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase D subunit 2a (AtNRPD2a) (Nuclear RNA polymerase D 2a) (EC 2.7.7.6) (Nuclear RNA polymerase E 2) (Protein DEFECTIVE IN MERISTEM SILENCING 2) (Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 2) (RNA polymerase IV subunit 2a) (POL IV 2a)
ruditapes_c1383	pollen exine formation	developmental processes	P	ABC transporter G family member 26 (ABC transporter ABCG.26) (AtABCG26) (Putative white-brown complex homolog protein 27) (AtWBC27)
ruditapes_c1383	pollen exine formation	cell organization and biogenesis	P	ABC transporter G family member 26 (ABC transporter ABCG.26) (AtABCG26) (Putative white-brown complex homolog protein 27) (AtWBC27)
ruditapes_c1383	pollen development	developmental processes	P	ABC transporter G family member 26 (ABC transporter ABCG.26) (AtABCG26) (Putative white-brown complex homolog protein 27) (AtWBC27)
ruditapes_c1383	pollen maturation	developmental processes	P	ABC transporter G family member 26 (ABC transporter ABCG.26) (AtABCG26) (Putative white-brown complex homolog protein 27) (AtWBC27)
ruditapes_c1383	transport	transport	P	ABC transporter G family member 26 (ABC transporter ABCG.26) (AtABCG26) (Putative white-brown complex homolog protein 27) (AtWBC27)
ruditapes_c1383	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 26 (ABC transporter ABCG.26) (AtABCG26) (Putative white-brown complex homolog protein 27) (AtWBC27)
ruditapes_c13934	response to other organism	other biological processes	P	ABC transporter C family member 7 (ABC transporter ABCC.7) (AtABCC7) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 7) (Glutathione S-conjugate-transporting ATPase 7) (Multidrug resistance-associated protein 7)
ruditapes_c13934	transmembrane transport	transport	P	ABC transporter C family member 7 (ABC transporter ABCC.7) (AtABCC7) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 7) (Glutathione S-conjugate-transporting ATPase 7) (Multidrug resistance-associated protein 7)
ruditapes_c13934	ATP catabolic process	other metabolic processes	P	ABC transporter C family member 7 (ABC transporter ABCC.7) (AtABCC7) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 7) (Glutathione S-conjugate-transporting ATPase 7) (Multidrug resistance-associated protein 7)
ruditapes_c13934	transport	transport	P	ABC transporter C family member 7 (ABC transporter ABCC.7) (AtABCC7) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 7) (Glutathione S-conjugate-transporting ATPase 7) (Multidrug resistance-associated protein 7)
ruditapes2_c2538	ATP catabolic process	other metabolic processes	P	ABC transporter C family member 3 (ABC transporter ABCC.3) (AtABCC3) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 3) (Glutathione S-conjugate-transporting ATPase 3) (Multidrug resistance-associated protein 3)
ruditapes2_c2538	transport	transport	P	ABC transporter C family member 3 (ABC transporter ABCC.3) (AtABCC3) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 3) (Glutathione S-conjugate-transporting ATPase 3) (Multidrug resistance-associated protein 3)
ruditapes2_c2538	transmembrane transport	transport	P	ABC transporter C family member 3 (ABC transporter ABCC.3) (AtABCC3) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 3) (Glutathione S-conjugate-transporting ATPase 3) (Multidrug resistance-associated protein 3)
ruditapes_c24578	DNA repair	stress response	P	DNA repair endonuclease UVH1 (EC 3.1.-.-) (DNA excision repair protein XP-F homolog) (Ultraviolet hypersensitive 1) (AtRAD1)
ruditapes_c24578	DNA repair	DNA metabolism	P	DNA repair endonuclease UVH1 (EC 3.1.-.-) (DNA excision repair protein XP-F homolog) (Ultraviolet hypersensitive 1) (AtRAD1)
ruditapes_c24578	double-strand break repair via homologous recombination	stress response	P	DNA repair endonuclease UVH1 (EC 3.1.-.-) (DNA excision repair protein XP-F homolog) (Ultraviolet hypersensitive 1) (AtRAD1)
ruditapes_c24578	double-strand break repair via homologous recombination	DNA metabolism	P	DNA repair endonuclease UVH1 (EC 3.1.-.-) (DNA excision repair protein XP-F homolog) (Ultraviolet hypersensitive 1) (AtRAD1)
ruditapes_c24578	response to oxidative stress	stress response	P	DNA repair endonuclease UVH1 (EC 3.1.-.-) (DNA excision repair protein XP-F homolog) (Ultraviolet hypersensitive 1) (AtRAD1)
ruditapes_c24578	nucleotide-excision repair	stress response	P	DNA repair endonuclease UVH1 (EC 3.1.-.-) (DNA excision repair protein XP-F homolog) (Ultraviolet hypersensitive 1) (AtRAD1)
ruditapes_c24578	nucleotide-excision repair	DNA metabolism	P	DNA repair endonuclease UVH1 (EC 3.1.-.-) (DNA excision repair protein XP-F homolog) (Ultraviolet hypersensitive 1) (AtRAD1)
ruditapes_c24578	response to radiation	other biological processes	P	DNA repair endonuclease UVH1 (EC 3.1.-.-) (DNA excision repair protein XP-F homolog) (Ultraviolet hypersensitive 1) (AtRAD1)
ruditapes_c24578	DNA recombination	DNA metabolism	P	DNA repair endonuclease UVH1 (EC 3.1.-.-) (DNA excision repair protein XP-F homolog) (Ultraviolet hypersensitive 1) (AtRAD1)
ruditapes_c24578	DNA metabolic process	DNA metabolism	P	DNA repair endonuclease UVH1 (EC 3.1.-.-) (DNA excision repair protein XP-F homolog) (Ultraviolet hypersensitive 1) (AtRAD1)
ruditapes_c24578	response to DNA damage stimulus	stress response	P	DNA repair endonuclease UVH1 (EC 3.1.-.-) (DNA excision repair protein XP-F homolog) (Ultraviolet hypersensitive 1) (AtRAD1)
ruditapes_c23100	negative regulation of catalytic activity	other biological processes	P	Xylem serine proteinase 1 (AtXSP1) (EC 3.4.21.-) (Cucumisin-like protein)
ruditapes_c23100	proteolysis	protein metabolism	P	Xylem serine proteinase 1 (AtXSP1) (EC 3.4.21.-) (Cucumisin-like protein)
ruditapes_lrc8240	metabolic process	other metabolic processes	P	Probable carboxylesterase 1 (AtCXE1) (EC 3.1.1.1)
ruditapes_c12861	lipid biosynthetic process	other metabolic processes	P	3-ketoacyl-CoA synthase 4 (KCS-4) (EC 2.3.1.199) (Very long-chain fatty acid condensing enzyme 4) (VLCFA condensing enzyme 4)
ruditapes_c12861	metabolic process	other metabolic processes	P	3-ketoacyl-CoA synthase 4 (KCS-4) (EC 2.3.1.199) (Very long-chain fatty acid condensing enzyme 4) (VLCFA condensing enzyme 4)
ruditapes_c12861	fatty acid biosynthetic process	other metabolic processes	P	3-ketoacyl-CoA synthase 4 (KCS-4) (EC 2.3.1.199) (Very long-chain fatty acid condensing enzyme 4) (VLCFA condensing enzyme 4)
ruditapes_s38479	biological_process	other biological processes	P	Serine/threonine-protein phosphatase 7 long form homolog (EC 3.1.3.16)
ruditapes_c9794	protein amino acid phosphorylation	protein metabolism	P	Probable inactive receptor kinase At1g48480
ruditapes_c22290	regulation of ARF protein signal transduction	signal transduction	P	Brefeldin A-inhibited guanine nucleotide-exchange protein 3 (BIG3) (ARF guanine-nucleotide exchange factor BIG3) (Protein EMBRYO SAC DEVELOPMENT ARREST 10)
ruditapes_c22290	megagametogenesis	developmental processes	P	Brefeldin A-inhibited guanine nucleotide-exchange protein 3 (BIG3) (ARF guanine-nucleotide exchange factor BIG3) (Protein EMBRYO SAC DEVELOPMENT ARREST 10)
ruditapes_c24981	biological_process	other biological processes	P	Rop guanine nucleotide exchange factor 2 (RopGEF2)
ruditapes2_lrc2902	biological_process	other biological processes	P	Probable calcium-binding protein CML17 (Calmodulin-like protein 17)
ruditapes_lrc21447	response to oxidative stress	stress response	P	Protein PLANT CADMIUM RESISTANCE 2 (AtPCR2)
ruditapes_lrc19430	response to oxidative stress	stress response	P	Protein PLANT CADMIUM RESISTANCE 2 (AtPCR2)
ruditapes_lrc13332	response to oxidative stress	stress response	P	Protein PLANT CADMIUM RESISTANCE 2 (AtPCR2)
ruditapes_lrc33181	response to oxidative stress	stress response	P	Protein PLANT CADMIUM RESISTANCE 2 (AtPCR2)
ruditapes_c26121	acidic amino acid transport	transport	P	Lysine histidine transporter 2 (AtLHT2) (Amino acid transporter-like protein 2)
ruditapes_c26121	transport	transport	P	Lysine histidine transporter 2 (AtLHT2) (Amino acid transporter-like protein 2)
ruditapes_c26121	neutral amino acid transport	transport	P	Lysine histidine transporter 2 (AtLHT2) (Amino acid transporter-like protein 2)
ruditapes_c26121	amino acid transport	transport	P	Lysine histidine transporter 2 (AtLHT2) (Amino acid transporter-like protein 2)
ruditapes_c14988	biological_process	other biological processes	P	Putative cysteine-rich repeat secretory protein 35
ruditapes_c13552	biological_process	other biological processes	P	Probable pectate lyase 9 (EC 4.2.2.2)
ruditapes_c22851	biological_process	other biological processes	P	Probable calcium-binding protein CML22 (Calmodulin-like protein 22)
ruditapes_c26954	defense response	stress response	P	Putative disease resistance protein At3g14460
ruditapes_c9045	defense response	stress response	P	Putative disease resistance protein At3g14460
ruditapes_c4936	response to stress	stress response	P	"Allene oxide cyclase 1, chloroplastic (EC 5.3.99.6) (Early-responsive to dehydration 12 protein)"
ruditapes_c4936	jasmonic acid biosynthetic process	other metabolic processes	P	"Allene oxide cyclase 1, chloroplastic (EC 5.3.99.6) (Early-responsive to dehydration 12 protein)"
ruditapes_c4213	transport	transport	P	ABC transporter B family member 18 (ABC transporter ABCB.18) (AtABCB18) (P-glycoprotein 18) (Putative multidrug resistance protein 20)
ruditapes_c4213	ATP catabolic process	other metabolic processes	P	ABC transporter B family member 18 (ABC transporter ABCB.18) (AtABCB18) (P-glycoprotein 18) (Putative multidrug resistance protein 20)
ruditapes_c4213	transmembrane transport	transport	P	ABC transporter B family member 18 (ABC transporter ABCB.18) (AtABCB18) (P-glycoprotein 18) (Putative multidrug resistance protein 20)
ruditapes_lrc30861	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Dof zinc finger protein DOF5.7 (AtDOF5.7)
ruditapes_lrc30861	"transcription, DNA-dependent"	RNA metabolism	P	Dof zinc finger protein DOF5.7 (AtDOF5.7)
ruditapes_c17832	tRNA processing	RNA metabolism	P	tRNA-splicing endonuclease subunit Sen2-2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2-2) (AtSen2)
ruditapes_c23786	tRNA processing	RNA metabolism	P	tRNA-splicing endonuclease subunit Sen2-2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2-2) (AtSen2)
ruditapes_c17832	"tRNA splicing, via endonucleolytic cleavage and ligation"	RNA metabolism	P	tRNA-splicing endonuclease subunit Sen2-2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2-2) (AtSen2)
ruditapes_c23786	mRNA processing	RNA metabolism	P	tRNA-splicing endonuclease subunit Sen2-2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2-2) (AtSen2)
ruditapes_c17832	mRNA processing	RNA metabolism	P	tRNA-splicing endonuclease subunit Sen2-2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2-2) (AtSen2)
ruditapes_c23786	"tRNA splicing, via endonucleolytic cleavage and ligation"	RNA metabolism	P	tRNA-splicing endonuclease subunit Sen2-2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2-2) (AtSen2)
ruditapes_c11572	protein amino acid phosphorylation	protein metabolism	P	Putative U-box domain-containing protein 53 (Plant U-box protein 53) [Includes: E3 ubiquitin ligase (EC 6.3.2.-); Serine/threonine-protein kinase (EC 2.7.11.-)]
ruditapes_c11572	protein ubiquitination	protein metabolism	P	Putative U-box domain-containing protein 53 (Plant U-box protein 53) [Includes: E3 ubiquitin ligase (EC 6.3.2.-); Serine/threonine-protein kinase (EC 2.7.11.-)]
ruditapes_c11572	phosphorylation	other metabolic processes	P	Putative U-box domain-containing protein 53 (Plant U-box protein 53) [Includes: E3 ubiquitin ligase (EC 6.3.2.-); Serine/threonine-protein kinase (EC 2.7.11.-)]
ruditapes_c1990	oxidation reduction	other metabolic processes	P	11-beta-hydroxysteroid dehydrogenase-like 4B (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase-like 4B) (EC 1.1.1.-) (Hydroxysteroid dehydrogenase 7) (AtHSD7)
ruditapes_c1990	metabolic process	other metabolic processes	P	11-beta-hydroxysteroid dehydrogenase-like 4B (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase-like 4B) (EC 1.1.1.-) (Hydroxysteroid dehydrogenase 7) (AtHSD7)
ruditapes_c23721	negative regulation of catalytic activity	other biological processes	P	Putative pectinesterase/pectinesterase inhibitor 26 (AtPMEpcrC) [Includes: Pectinesterase inhibitor 26 (Pectin methylesterase inhibitor 26); Pectinesterase 26 (PE 26) (EC 3.1.1.11) (Pectin methylesterase 26) (AtPME26)]
ruditapes_c17466	cell wall modification	cell organization and biogenesis	P	Putative pectinesterase/pectinesterase inhibitor 26 (AtPMEpcrC) [Includes: Pectinesterase inhibitor 26 (Pectin methylesterase inhibitor 26); Pectinesterase 26 (PE 26) (EC 3.1.1.11) (Pectin methylesterase 26) (AtPME26)]
ruditapes_c23721	cell wall modification	cell organization and biogenesis	P	Putative pectinesterase/pectinesterase inhibitor 26 (AtPMEpcrC) [Includes: Pectinesterase inhibitor 26 (Pectin methylesterase inhibitor 26); Pectinesterase 26 (PE 26) (EC 3.1.1.11) (Pectin methylesterase 26) (AtPME26)]
ruditapes_c17466	negative regulation of catalytic activity	other biological processes	P	Putative pectinesterase/pectinesterase inhibitor 26 (AtPMEpcrC) [Includes: Pectinesterase inhibitor 26 (Pectin methylesterase inhibitor 26); Pectinesterase 26 (PE 26) (EC 3.1.1.11) (Pectin methylesterase 26) (AtPME26)]
ruditapes2_c1873	biological_process	other biological processes	P	Putative F-box protein At3g17490
ruditapes2_c1500	glutamate biosynthetic process	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes2_c1500	glutamine metabolic process	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes2_c1500	metabolic process	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes2_c1500	cellular amino acid biosynthetic process	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes2_c1500	nitrogen compound metabolic process	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes2_c1500	oxidation reduction	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes2_c1500	ammonia assimilation cycle	other metabolic processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes2_c1500	developmental growth	other biological processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes2_c1500	response to cadmium ion	other biological processes	P	"Glutamate synthase 1 [NADH], chloroplastic (EC 1.4.1.14) (NADH-dependent glutamate synthase 1) (NADH-GOGAT 1)"
ruditapes_c20237	protein amino acid glycosylation	protein metabolism	P	"Probable beta-1,3-galactosyltransferase 19 (EC 2.4.1.-)"
ruditapes_c26934	protein amino acid glycosylation	protein metabolism	P	"Probable beta-1,3-galactosyltransferase 19 (EC 2.4.1.-)"
ruditapes_c8539	"regulation of transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase D subunit 2b (AtNRPD2b) (Nuclear RNA polymerase D 2b) (EC 2.7.7.6) (RNA polymerase IV subunit 2b) (POL IV 2b)
ruditapes_c8539	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase D subunit 2b (AtNRPD2b) (Nuclear RNA polymerase D 2b) (EC 2.7.7.6) (RNA polymerase IV subunit 2b) (POL IV 2b)
ruditapes_c8539	gene silencing	other metabolic processes	P	DNA-directed RNA polymerase D subunit 2b (AtNRPD2b) (Nuclear RNA polymerase D 2b) (EC 2.7.7.6) (RNA polymerase IV subunit 2b) (POL IV 2b)
ruditapes_c20789	biological_process	other biological processes	P	BTB/POZ domain-containing protein At5g48510
ruditapes_c9315	lipid transport	transport	P	Oxysterol-binding protein-related protein 4C (OSBP-related protein 4C)
ruditapes_c9315	transport	transport	P	Oxysterol-binding protein-related protein 4C (OSBP-related protein 4C)
ruditapes2_lrc4907	protein transport	transport	P	VAMP-like protein YKT62 (AtYKT62) (ATGP1-like protein)
ruditapes2_lrc4907	vesicle-mediated transport	transport	P	VAMP-like protein YKT62 (AtYKT62) (ATGP1-like protein)
ruditapes2_lrc4907	transport	transport	P	VAMP-like protein YKT62 (AtYKT62) (ATGP1-like protein)
ruditapes2_c792	embryonic development	developmental processes	P	Protein RKD4 (AtRKD4) (RWP-RK domain-containing protein 4)
ruditapes2_c792	"transcription, DNA-dependent"	RNA metabolism	P	Protein RKD4 (AtRKD4) (RWP-RK domain-containing protein 4)
ruditapes2_c792	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein RKD4 (AtRKD4) (RWP-RK domain-containing protein 4)
ruditapes_lrc35677	biological_process	other biological processes	P	Calmodulin-like protein 4
ruditapes_c26694	biological_process	other biological processes	P	Putative F-box/FBD/LRR-repeat protein At3g59240
ruditapes_c9240	phosphorylation	other metabolic processes	P	L-type lectin-domain containing receptor kinase IX.1 (LecRK-IX.1) (EC 2.7.11.1)
ruditapes_c9240	protein amino acid phosphorylation	protein metabolism	P	L-type lectin-domain containing receptor kinase IX.1 (LecRK-IX.1) (EC 2.7.11.1)
ruditapes_c9839	response to wounding	stress response	P	Probable fatty acyl-CoA reductase 4 (EC 1.2.1.n2)
ruditapes_c9839	oxidation reduction	other metabolic processes	P	Probable fatty acyl-CoA reductase 4 (EC 1.2.1.n2)
ruditapes_c9839	lipid biosynthetic process	other metabolic processes	P	Probable fatty acyl-CoA reductase 4 (EC 1.2.1.n2)
ruditapes_c9839	response to salt stress	stress response	P	Probable fatty acyl-CoA reductase 4 (EC 1.2.1.n2)
ruditapes_c9839	lipid metabolic process	other metabolic processes	P	Probable fatty acyl-CoA reductase 4 (EC 1.2.1.n2)
ruditapes_c9839	suberin biosynthetic process	other metabolic processes	P	Probable fatty acyl-CoA reductase 4 (EC 1.2.1.n2)
ruditapes_lrc24225	metabolic process	other metabolic processes	P	UDP-glycosyltransferase 92A1 (EC 2.4.1.-)
ruditapes_c31864	oxaloacetate transport	transport	P	"Dicarboxylate transporter 1, chloroplastic (2-oxoglutarate/malate translocator 1) (AtpOMT1)"
ruditapes_c31864	alpha-ketoglutarate transport	transport	P	"Dicarboxylate transporter 1, chloroplastic (2-oxoglutarate/malate translocator 1) (AtpOMT1)"
ruditapes_c31864	sodium ion transport	transport	P	"Dicarboxylate transporter 1, chloroplastic (2-oxoglutarate/malate translocator 1) (AtpOMT1)"
ruditapes_c31864	transmembrane transport	transport	P	"Dicarboxylate transporter 1, chloroplastic (2-oxoglutarate/malate translocator 1) (AtpOMT1)"
ruditapes_c31864	response to nematode	other biological processes	P	"Dicarboxylate transporter 1, chloroplastic (2-oxoglutarate/malate translocator 1) (AtpOMT1)"
ruditapes2_c2488	cation transport	transport	P	"ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)"
ruditapes2_c2488	ATP biosynthetic process	other metabolic processes	P	"ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)"
ruditapes2_c2488	proton transport	transport	P	"ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)"
ruditapes2_c2488	metabolic process	other metabolic processes	P	"ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)"
ruditapes2_c2488	ion transport	transport	P	"ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)"
ruditapes2_c2488	ATP catabolic process	other metabolic processes	P	"ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)"
ruditapes2_c2488	transport	transport	P	"ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)"
ruditapes_c21431	signal transduction	signal transduction	P	Phosphoinositide phospholipase C 7 (EC 3.1.4.11) (Phosphoinositide phospholipase PLC7) (AtPLC10) (AtPLC7) (PI-PLC7)
ruditapes_c21431	lipid catabolic process	other metabolic processes	P	Phosphoinositide phospholipase C 7 (EC 3.1.4.11) (Phosphoinositide phospholipase PLC7) (AtPLC10) (AtPLC7) (PI-PLC7)
ruditapes_c21431	lipid metabolic process	other metabolic processes	P	Phosphoinositide phospholipase C 7 (EC 3.1.4.11) (Phosphoinositide phospholipase PLC7) (AtPLC10) (AtPLC7) (PI-PLC7)
ruditapes_c26613	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase RGLG2 (EC 6.3.2.-) (RING domain ligase 2)
ruditapes_c26613	auxin metabolic process	other metabolic processes	P	E3 ubiquitin-protein ligase RGLG2 (EC 6.3.2.-) (RING domain ligase 2)
ruditapes_c26613	cytokinin metabolic process	other metabolic processes	P	E3 ubiquitin-protein ligase RGLG2 (EC 6.3.2.-) (RING domain ligase 2)
ruditapes_lrc34053	cellular iron ion homeostasis	other biological processes	P	"Ferritin-3, chloroplastic (EC 1.16.3.1)"
ruditapes_lrc34053	response to iron ion	other biological processes	P	"Ferritin-3, chloroplastic (EC 1.16.3.1)"
ruditapes_lrc33907	iron ion transport	transport	P	"Ferritin-3, chloroplastic (EC 1.16.3.1)"
ruditapes_lrc34053	iron ion transport	transport	P	"Ferritin-3, chloroplastic (EC 1.16.3.1)"
ruditapes_lrc34053	oxidation reduction	other metabolic processes	P	"Ferritin-3, chloroplastic (EC 1.16.3.1)"
ruditapes_lrc33907	oxidation reduction	other metabolic processes	P	"Ferritin-3, chloroplastic (EC 1.16.3.1)"
ruditapes_lrc33907	cellular iron ion homeostasis	other biological processes	P	"Ferritin-3, chloroplastic (EC 1.16.3.1)"
ruditapes_lrc33907	response to iron ion	other biological processes	P	"Ferritin-3, chloroplastic (EC 1.16.3.1)"
ruditapes_c29896	transport	transport	P	Probable peptide/nitrate transporter At5g13400
ruditapes_c29896	oligopeptide transport	transport	P	Probable peptide/nitrate transporter At5g13400
ruditapes_c8713	cell wall organization	cell organization and biogenesis	P	"Putative callose synthase 6 (EC 2.4.1.34) (1,3-beta-glucan synthase) (Protein GLUCAN SYNTHASE-LIKE 11)"
ruditapes_c8713	regulation of cell shape	cell organization and biogenesis	P	"Putative callose synthase 6 (EC 2.4.1.34) (1,3-beta-glucan synthase) (Protein GLUCAN SYNTHASE-LIKE 11)"
ruditapes_c8713	"1,3-beta-glucan biosynthetic process"	other metabolic processes	P	"Putative callose synthase 6 (EC 2.4.1.34) (1,3-beta-glucan synthase) (Protein GLUCAN SYNTHASE-LIKE 11)"
ruditapes_c21093	phosphorylation	other metabolic processes	P	L-type lectin-domain containing receptor kinase VIII.2 (LecRK-VIII.2) (EC 2.7.11.1)
ruditapes_c21093	protein amino acid phosphorylation	protein metabolism	P	L-type lectin-domain containing receptor kinase VIII.2 (LecRK-VIII.2) (EC 2.7.11.1)
ruditapes_c23426	metabolic process	other metabolic processes	P	UDP-glycosyltransferase 89A2 (EC 2.4.1.-)
ruditapes_c24250	biological_process	other biological processes	P	F-box protein At3g60790
ruditapes_c10829	phosphorylation	other metabolic processes	P	Cysteine-rich receptor-like protein kinase 25 (Cysteine-rich RLK25) (EC 2.7.11.-)
ruditapes_c10829	protein amino acid phosphorylation	protein metabolism	P	Cysteine-rich receptor-like protein kinase 25 (Cysteine-rich RLK25) (EC 2.7.11.-)
ruditapes_lrc34926	oligopeptide transport	transport	P	Probable nitrate excretion transporter 3 (Protein NAXT1-like 2)
ruditapes_lrc34926	transport	transport	P	Probable nitrate excretion transporter 3 (Protein NAXT1-like 2)
ruditapes_lrc34926	response to nematode	other biological processes	P	Probable nitrate excretion transporter 3 (Protein NAXT1-like 2)
ruditapes_lrc34926	nitrate assimilation	other metabolic processes	P	Probable nitrate excretion transporter 3 (Protein NAXT1-like 2)
ruditapes_c7312	carbohydrate metabolic process	other metabolic processes	P	Probable fructokinase-4 (EC 2.7.1.4)
ruditapes_c7312	phosphorylation	other metabolic processes	P	Probable fructokinase-4 (EC 2.7.1.4)
ruditapes_c7312	D-ribose metabolic process	other metabolic processes	P	Probable fructokinase-4 (EC 2.7.1.4)
ruditapes_c18534	carbohydrate metabolic process	other metabolic processes	P	Beta-glucosidase 30 (AtBGLU30) (EC 3.2.1.21) (Protein DARK INDUCIBLE 2) (Protein SENESCENCE-RELATED GENE 2)
ruditapes_c18534	metabolic process	other metabolic processes	P	Beta-glucosidase 30 (AtBGLU30) (EC 3.2.1.21) (Protein DARK INDUCIBLE 2) (Protein SENESCENCE-RELATED GENE 2)
ruditapes_c8033	transport	transport	P	Probable peptide/nitrate transporter At3g54450
ruditapes_c8033	oligopeptide transport	transport	P	Probable peptide/nitrate transporter At3g54450
ruditapes_c15191	phosphatidylinositol metabolic process	other metabolic processes	P	Phosphatidylinositol 4-phosphate 5-kinase 4 (AtPIP5K4) (EC 2.7.1.68) (1-phosphatidylinositol 4-phosphate kinase 4) (Diphosphoinositide kinase 4) (PtdIns(4)P-5-kinase 4)
ruditapes_c15191	establishment of tissue polarity	other biological processes	P	Phosphatidylinositol 4-phosphate 5-kinase 4 (AtPIP5K4) (EC 2.7.1.68) (1-phosphatidylinositol 4-phosphate kinase 4) (Diphosphoinositide kinase 4) (PtdIns(4)P-5-kinase 4)
ruditapes_c15191	phosphoinositide phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-phosphate 5-kinase 4 (AtPIP5K4) (EC 2.7.1.68) (1-phosphatidylinositol 4-phosphate kinase 4) (Diphosphoinositide kinase 4) (PtdIns(4)P-5-kinase 4)
ruditapes_c15191	pollen tube growth	developmental processes	P	Phosphatidylinositol 4-phosphate 5-kinase 4 (AtPIP5K4) (EC 2.7.1.68) (1-phosphatidylinositol 4-phosphate kinase 4) (Diphosphoinositide kinase 4) (PtdIns(4)P-5-kinase 4)
ruditapes_c15191	plant-type cell wall modification	cell organization and biogenesis	P	Phosphatidylinositol 4-phosphate 5-kinase 4 (AtPIP5K4) (EC 2.7.1.68) (1-phosphatidylinositol 4-phosphate kinase 4) (Diphosphoinositide kinase 4) (PtdIns(4)P-5-kinase 4)
ruditapes_c15191	pollen germination	other biological processes	P	Phosphatidylinositol 4-phosphate 5-kinase 4 (AtPIP5K4) (EC 2.7.1.68) (1-phosphatidylinositol 4-phosphate kinase 4) (Diphosphoinositide kinase 4) (PtdIns(4)P-5-kinase 4)
ruditapes_c15191	phosphorylation	other metabolic processes	P	Phosphatidylinositol 4-phosphate 5-kinase 4 (AtPIP5K4) (EC 2.7.1.68) (1-phosphatidylinositol 4-phosphate kinase 4) (Diphosphoinositide kinase 4) (PtdIns(4)P-5-kinase 4)
ruditapes_c15191	endocytosis	transport	P	Phosphatidylinositol 4-phosphate 5-kinase 4 (AtPIP5K4) (EC 2.7.1.68) (1-phosphatidylinositol 4-phosphate kinase 4) (Diphosphoinositide kinase 4) (PtdIns(4)P-5-kinase 4)
ruditapes_c15191	endocytosis	cell organization and biogenesis	P	Phosphatidylinositol 4-phosphate 5-kinase 4 (AtPIP5K4) (EC 2.7.1.68) (1-phosphatidylinositol 4-phosphate kinase 4) (Diphosphoinositide kinase 4) (PtdIns(4)P-5-kinase 4)
ruditapes_c15191	stomatal movement	other biological processes	P	Phosphatidylinositol 4-phosphate 5-kinase 4 (AtPIP5K4) (EC 2.7.1.68) (1-phosphatidylinositol 4-phosphate kinase 4) (Diphosphoinositide kinase 4) (PtdIns(4)P-5-kinase 4)
ruditapes_c16209	phosphorylation	other metabolic processes	P	Putative L-type lectin-domain containing receptor kinase V.8 (LecRK-V.8) (EC 2.7.11.1)
ruditapes_c16209	protein amino acid phosphorylation	protein metabolism	P	Putative L-type lectin-domain containing receptor kinase V.8 (LecRK-V.8) (EC 2.7.11.1)
ruditapes_c3491	cell division	other biological processes	P	Cyclin-U2-2 (CycU2;2) (Cyclin-P3.2) (CycP3;2)
ruditapes_c3491	regulation of cyclin-dependent protein kinase activity	cell cycle and proliferation	P	Cyclin-U2-2 (CycU2;2) (Cyclin-P3.2) (CycP3;2)
ruditapes_c3491	regulation of cyclin-dependent protein kinase activity	other metabolic processes	P	Cyclin-U2-2 (CycU2;2) (Cyclin-P3.2) (CycP3;2)
ruditapes_c3491	cell cycle	cell cycle and proliferation	P	Cyclin-U2-2 (CycU2;2) (Cyclin-P3.2) (CycP3;2)
ruditapes_c18294	endocytosis	transport	P	AP3-complex subunit beta-A (Adapter-related protein complex 3 subunit beta-A) (Adaptor protein complex AP-3 subunit beta-A) (Beta-3B-adaptin) (Clathrin assembly protein complex 3 beta-A large chain)
ruditapes_c18294	endocytosis	cell organization and biogenesis	P	AP3-complex subunit beta-A (Adapter-related protein complex 3 subunit beta-A) (Adaptor protein complex AP-3 subunit beta-A) (Beta-3B-adaptin) (Clathrin assembly protein complex 3 beta-A large chain)
ruditapes_c18294	intracellular protein transport	transport	P	AP3-complex subunit beta-A (Adapter-related protein complex 3 subunit beta-A) (Adaptor protein complex AP-3 subunit beta-A) (Beta-3B-adaptin) (Clathrin assembly protein complex 3 beta-A large chain)
ruditapes_c18294	protein transport	transport	P	AP3-complex subunit beta-A (Adapter-related protein complex 3 subunit beta-A) (Adaptor protein complex AP-3 subunit beta-A) (Beta-3B-adaptin) (Clathrin assembly protein complex 3 beta-A large chain)
ruditapes_c18294	vesicle-mediated transport	transport	P	AP3-complex subunit beta-A (Adapter-related protein complex 3 subunit beta-A) (Adaptor protein complex AP-3 subunit beta-A) (Beta-3B-adaptin) (Clathrin assembly protein complex 3 beta-A large chain)
ruditapes_c18294	transport	transport	P	AP3-complex subunit beta-A (Adapter-related protein complex 3 subunit beta-A) (Adaptor protein complex AP-3 subunit beta-A) (Beta-3B-adaptin) (Clathrin assembly protein complex 3 beta-A large chain)
ruditapes_c25731	response to light stimulus	other biological processes	P	BTB/POZ domain-containing protein At3g49900
ruditapes_c25731	signal transduction	signal transduction	P	BTB/POZ domain-containing protein At3g49900
ruditapes_c13532	translation	protein metabolism	P	40S ribosomal protein S21-1
ruditapes_c9203	protein targeting to vacuole	transport	P	Beclin-1-like protein
ruditapes_c9203	defense response to fungus	stress response	P	Beclin-1-like protein
ruditapes_c9203	autophagic vacuole formation	stress response	P	Beclin-1-like protein
ruditapes_c9203	autophagic vacuole formation	other metabolic processes	P	Beclin-1-like protein
ruditapes_c9203	autophagic vacuole formation	cell organization and biogenesis	P	Beclin-1-like protein
ruditapes_c9203	autophagy	other metabolic processes	P	Beclin-1-like protein
ruditapes_c9203	pollen germination	other biological processes	P	Beclin-1-like protein
ruditapes_c9639	vacuolar transport	transport	P	ABC transporter G family member 19 (ABC transporter ABCG.19) (AtABCG19) (White-brown complex homolog protein 19) (AtWBC19)
ruditapes_c9639	antibiotic transport	transport	P	ABC transporter G family member 19 (ABC transporter ABCG.19) (AtABCG19) (White-brown complex homolog protein 19) (AtWBC19)
ruditapes_c9639	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 19 (ABC transporter ABCG.19) (AtABCG19) (White-brown complex homolog protein 19) (AtWBC19)
ruditapes_c9639	transport	transport	P	ABC transporter G family member 19 (ABC transporter ABCG.19) (AtABCG19) (White-brown complex homolog protein 19) (AtWBC19)
ruditapes_c7360	transport	transport	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c7360	ATP synthesis coupled electron transport	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c7360	oxidation reduction	other metabolic processes	P	"NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)"
ruditapes_c21709	spermine biosynthetic process	other metabolic processes	P	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]
ruditapes_c21709	polyamine biosynthetic process	other metabolic processes	P	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]
ruditapes_c21709	spermidine biosynthetic process	other metabolic processes	P	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]
ruditapes_c28358	phospholipid biosynthetic process	other metabolic processes	P	Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)
ruditapes_c28358	response to stress	stress response	P	Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)
ruditapes_c28358	methylation	other metabolic processes	P	Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)
ruditapes_c28358	metabolic process	other metabolic processes	P	Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)
ruditapes_c8851	"defense response, incompatible interaction"	stress response	P	Disease resistance protein RPP13 (Resistance to Peronospora parasitica protein 13)
ruditapes_c8851	plant-type hypersensitive response	stress response	P	Disease resistance protein RPP13 (Resistance to Peronospora parasitica protein 13)
ruditapes_c8851	plant-type hypersensitive response	death	P	Disease resistance protein RPP13 (Resistance to Peronospora parasitica protein 13)
ruditapes_c8851	defense response	stress response	P	Disease resistance protein RPP13 (Resistance to Peronospora parasitica protein 13)
ruditapes_c31514	chlorophyll catabolic process	other metabolic processes	P	"Chlorophyllase-2, chloroplastic (AtCLH2) (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 2) (Chlase 2)"
ruditapes_c24610	acyl-CoA biosynthetic process	other metabolic processes	P	"Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial (EC 2.3.1.168) (Branched-chain alpha-keto acid dehydrogenase complex component E2) (BCE2) (BCKAD-E2) (BCKADE2) (Dihydrolipoamide acetyltransferase component of branched-chain alpha-keto acid dehydrogenase complex) (Dihydrolipoamide branched chain transacylase) (Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase) (Protein DARK INDUCIBLE 3)"
ruditapes_c24610	metabolic process	other metabolic processes	P	"Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial (EC 2.3.1.168) (Branched-chain alpha-keto acid dehydrogenase complex component E2) (BCE2) (BCKAD-E2) (BCKADE2) (Dihydrolipoamide acetyltransferase component of branched-chain alpha-keto acid dehydrogenase complex) (Dihydrolipoamide branched chain transacylase) (Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase) (Protein DARK INDUCIBLE 3)"
ruditapes_c4886	peroxisome organization	cell organization and biogenesis	P	Peroxisome biogenesis protein 12 (Peroxin-12) (AtPEX12) (Pex12p) (Protein ABERRANT PEROXISOME MORPHOLOGY 4)
ruditapes_c4886	protein transport	transport	P	Peroxisome biogenesis protein 12 (Peroxin-12) (AtPEX12) (Pex12p) (Protein ABERRANT PEROXISOME MORPHOLOGY 4)
ruditapes_c4886	transport	transport	P	Peroxisome biogenesis protein 12 (Peroxin-12) (AtPEX12) (Pex12p) (Protein ABERRANT PEROXISOME MORPHOLOGY 4)
ruditapes_c4886	fatty acid beta-oxidation	other metabolic processes	P	Peroxisome biogenesis protein 12 (Peroxin-12) (AtPEX12) (Pex12p) (Protein ABERRANT PEROXISOME MORPHOLOGY 4)
ruditapes_c4886	embryonic morphogenesis	developmental processes	P	Peroxisome biogenesis protein 12 (Peroxin-12) (AtPEX12) (Pex12p) (Protein ABERRANT PEROXISOME MORPHOLOGY 4)
ruditapes_c4886	protein import into peroxisome matrix	transport	P	Peroxisome biogenesis protein 12 (Peroxin-12) (AtPEX12) (Pex12p) (Protein ABERRANT PEROXISOME MORPHOLOGY 4)
ruditapes_c4886	protein import into peroxisome matrix	cell organization and biogenesis	P	Peroxisome biogenesis protein 12 (Peroxin-12) (AtPEX12) (Pex12p) (Protein ABERRANT PEROXISOME MORPHOLOGY 4)
ruditapes_s40059	microgametogenesis	developmental processes	P	"Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase)"
ruditapes_s40059	glutamine metabolic process	other metabolic processes	P	"Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase)"
ruditapes_s40059	purine nucleotide biosynthetic process	other metabolic processes	P	"Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase)"
ruditapes_s40059	pollen development	developmental processes	P	"Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase)"
ruditapes_s40059	'de novo' IMP biosynthetic process	other metabolic processes	P	"Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase)"
ruditapes2_c126	phosphorylation	other metabolic processes	P	L-type lectin-domain containing receptor kinase S.1 (LecRK-S.1) (EC 2.7.11.1)
ruditapes2_c126	protein amino acid phosphorylation	protein metabolism	P	L-type lectin-domain containing receptor kinase S.1 (LecRK-S.1) (EC 2.7.11.1)
ruditapes_c30111	proteolysis	protein metabolism	P	"Lon protease homolog 4, chloroplastic/mitochondrial (AtLon4) (EC 3.4.21.-)"
ruditapes2_c6145	cell wall modification	cell organization and biogenesis	P	Putative pectinesterase/pectinesterase inhibitor 22 [Includes: Pectinesterase inhibitor 22 (Pectin methylesterase inhibitor 22); Pectinesterase 22 (PE 22) (EC 3.1.1.11) (Pectin methylesterase 22) (AtPME22)]
ruditapes2_c6145	negative regulation of catalytic activity	other biological processes	P	Putative pectinesterase/pectinesterase inhibitor 22 [Includes: Pectinesterase inhibitor 22 (Pectin methylesterase inhibitor 22); Pectinesterase 22 (PE 22) (EC 3.1.1.11) (Pectin methylesterase 22) (AtPME22)]
ruditapes2_c6145	cell wall organization	cell organization and biogenesis	P	Putative pectinesterase/pectinesterase inhibitor 22 [Includes: Pectinesterase inhibitor 22 (Pectin methylesterase inhibitor 22); Pectinesterase 22 (PE 22) (EC 3.1.1.11) (Pectin methylesterase 22) (AtPME22)]
ruditapes_c22982	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 24 (ABC transporter ABCG.24) (AtABCG24) (Probable white-brown complex homolog protein 25) (AtWBC25)
ruditapes_c22982	transport	transport	P	ABC transporter G family member 24 (ABC transporter ABCG.24) (AtABCG24) (Probable white-brown complex homolog protein 25) (AtWBC25)
ruditapes_c20435	transport	transport	P	ABC transporter G family member 24 (ABC transporter ABCG.24) (AtABCG24) (Probable white-brown complex homolog protein 25) (AtWBC25)
ruditapes_c20435	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 24 (ABC transporter ABCG.24) (AtABCG24) (Probable white-brown complex homolog protein 25) (AtWBC25)
ruditapes_c27340	ATP catabolic process	other metabolic processes	P	"Dynein-1-beta heavy chain, flagellar inner arm I1 complex (1-beta DHC) (Dynein-1, subspecies f)"
ruditapes_c18570	ATP catabolic process	other metabolic processes	P	"Dynein-1-beta heavy chain, flagellar inner arm I1 complex (1-beta DHC) (Dynein-1, subspecies f)"
ruditapes_c27340	microtubule-based movement	other biological processes	P	"Dynein-1-beta heavy chain, flagellar inner arm I1 complex (1-beta DHC) (Dynein-1, subspecies f)"
ruditapes_c18570	microtubule-based movement	other biological processes	P	"Dynein-1-beta heavy chain, flagellar inner arm I1 complex (1-beta DHC) (Dynein-1, subspecies f)"
ruditapes_c27340	cell projection organization	cell organization and biogenesis	P	"Dynein-1-beta heavy chain, flagellar inner arm I1 complex (1-beta DHC) (Dynein-1, subspecies f)"
ruditapes_c18570	cell projection organization	cell organization and biogenesis	P	"Dynein-1-beta heavy chain, flagellar inner arm I1 complex (1-beta DHC) (Dynein-1, subspecies f)"
ruditapes_c30565	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L)
ruditapes_c30565	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L)
ruditapes_c30565	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L)
ruditapes_c30565	transport	transport	P	NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L)
ruditapes_s33315	photosynthesis	other metabolic processes	P	Photosystem II reaction center protein K (PSII-K)
ruditapes_c28501	tRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_c28501	mRNA processing	RNA metabolism	P	Maturase K (Intron maturase)
ruditapes_lrc26272	translation	protein metabolism	P	"50S ribosomal protein L2, apicoplast"
ruditapes_c11837	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta)
ruditapes2_c2713	protein amino acid glycosylation	protein metabolism	P	"Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1) (Beta3Gal-T1) (Beta3GalT1) (EC 2.4.1.-) (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,3-galactosyltransferase 1)"
ruditapes_c22114	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c7690	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes2_c2210	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c16670	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c7690	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c7690	steroid catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c18993	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_lrc36537	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c16670	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_lrc36537	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c22114	steroid catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c5406	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes2_c2210	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_lrc36537	steroid catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c18993	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c7690	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c16670	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c7690	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c22114	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c22114	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_lrc36537	lipid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c5406	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c18993	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_lrc36537	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes2_c2210	steroid catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c18993	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c22114	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c5406	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c5406	steroid catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c16670	oxidation reduction	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes2_c2210	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c5406	metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c16670	steroid catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes2_c2210	steroid metabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_c18993	steroid catabolic process	other metabolic processes	P	17-beta-hydroxysteroid dehydrogenase 14 (17-beta-HSD 14) (EC 1.1.1.-) (17-beta-hydroxysteroid dehydrogenase DHRS10) (Dehydrogenase/reductase SDR family member 10) (Retinal short-chain dehydrogenase/reductase retSDR3)
ruditapes_lrc35679	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5122	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5122	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36353	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5122	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35679	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5122	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5122	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36353	transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35679	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35679	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36353	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36353	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36353	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35679	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes2_lrc5122	proton transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc35679	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_lrc36353	ion transport	transport	P	"ATP synthase subunit e, mitochondrial (ATPase subunit e)"
ruditapes_c23828	response to cAMP	other biological processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c23828	hormone biosynthetic process	other metabolic processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c23828	response to oxidative stress	stress response	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c23828	cuticle development	developmental processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c23828	superoxide anion generation	other metabolic processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c23828	cytokine-mediated signaling pathway	signal transduction	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c23828	hydrogen peroxide catabolic process	stress response	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c23828	hydrogen peroxide catabolic process	other metabolic processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c23828	oxidation reduction	other metabolic processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c7956	G-protein coupled receptor protein signaling pathway	signal transduction	P	Melanocortin receptor 5 (MC5-R) (Fragment)
ruditapes_c7956	signal transduction	signal transduction	P	Melanocortin receptor 5 (MC5-R) (Fragment)
ruditapes_c29117	oxidation reduction	other metabolic processes	P	Cytochrome P450 2E1 (EC 1.14.13.-) (4-nitrophenol 2-hydroxylase) (EC 1.14.13.n7) (CYPIIE1)
ruditapes2_lrc6225	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc33487	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc33504	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes2_lrc4544	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes2_lrc3943	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc33379	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes_lrc38640	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes2_lrc4852	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes2_lrc5279	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1)
ruditapes2_c2000	oxidation reduction	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes2_c2000	steroid biosynthetic process	other metabolic processes	P	"Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.99.9) (EC 4.1.2.30) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)"
ruditapes2_c2448	negative regulation of extracellular matrix disassembly	cell organization and biogenesis	P	Dipeptidyl peptidase 4 (EC 3.4.14.5) (Dipeptidyl peptidase IV) (DPP IV) (T-cell activation antigen CD26) (CD antigen CD26) [Cleaved into: Dipeptidyl peptidase 4 membrane form (Dipeptidyl peptidase IV membrane form); Dipeptidyl peptidase 4 soluble form (Dipeptidyl peptidase IV soluble form)]
ruditapes2_c2448	cell adhesion	cell adhesion	P	Dipeptidyl peptidase 4 (EC 3.4.14.5) (Dipeptidyl peptidase IV) (DPP IV) (T-cell activation antigen CD26) (CD antigen CD26) [Cleaved into: Dipeptidyl peptidase 4 membrane form (Dipeptidyl peptidase IV membrane form); Dipeptidyl peptidase 4 soluble form (Dipeptidyl peptidase IV soluble form)]
ruditapes2_c2448	T cell costimulation	other biological processes	P	Dipeptidyl peptidase 4 (EC 3.4.14.5) (Dipeptidyl peptidase IV) (DPP IV) (T-cell activation antigen CD26) (CD antigen CD26) [Cleaved into: Dipeptidyl peptidase 4 membrane form (Dipeptidyl peptidase IV membrane form); Dipeptidyl peptidase 4 soluble form (Dipeptidyl peptidase IV soluble form)]
ruditapes2_c2448	proteolysis	protein metabolism	P	Dipeptidyl peptidase 4 (EC 3.4.14.5) (Dipeptidyl peptidase IV) (DPP IV) (T-cell activation antigen CD26) (CD antigen CD26) [Cleaved into: Dipeptidyl peptidase 4 membrane form (Dipeptidyl peptidase IV membrane form); Dipeptidyl peptidase 4 soluble form (Dipeptidyl peptidase IV soluble form)]
ruditapes2_c2448	endothelial cell migration	other biological processes	P	Dipeptidyl peptidase 4 (EC 3.4.14.5) (Dipeptidyl peptidase IV) (DPP IV) (T-cell activation antigen CD26) (CD antigen CD26) [Cleaved into: Dipeptidyl peptidase 4 membrane form (Dipeptidyl peptidase IV membrane form); Dipeptidyl peptidase 4 soluble form (Dipeptidyl peptidase IV soluble form)]
ruditapes2_c2448	positive regulation of cell proliferation	cell cycle and proliferation	P	Dipeptidyl peptidase 4 (EC 3.4.14.5) (Dipeptidyl peptidase IV) (DPP IV) (T-cell activation antigen CD26) (CD antigen CD26) [Cleaved into: Dipeptidyl peptidase 4 membrane form (Dipeptidyl peptidase IV membrane form); Dipeptidyl peptidase 4 soluble form (Dipeptidyl peptidase IV soluble form)]
ruditapes_lrc11037	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (NADH-ubiquinone oxidoreductase 17.0 kDa subunit)
ruditapes2_c186	electron transport chain	other metabolic processes	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (NADH-ubiquinone oxidoreductase 17.0 kDa subunit)
ruditapes2_c186	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (NADH-ubiquinone oxidoreductase 17.0 kDa subunit)
ruditapes_lrc11037	transport	transport	P	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (NADH-ubiquinone oxidoreductase 17.0 kDa subunit)
ruditapes_c13263	cell adhesion	cell adhesion	P	Protein sidekick homolog (Neuronal IgCAM protein 4)
ruditapes_c13263	mitosis	cell cycle and proliferation	P	Protein sidekick homolog (Neuronal IgCAM protein 4)
ruditapes_c13263	mitosis	cell organization and biogenesis	P	Protein sidekick homolog (Neuronal IgCAM protein 4)
ruditapes_c13263	embryonic development ending in birth or egg hatching	developmental processes	P	Protein sidekick homolog (Neuronal IgCAM protein 4)
ruditapes_c13263	locomotion	other biological processes	P	Protein sidekick homolog (Neuronal IgCAM protein 4)
ruditapes_lrc32938	growth	other biological processes	P	60S ribosomal protein L10a
ruditapes_lrc32938	nematode larval development	developmental processes	P	60S ribosomal protein L10a
ruditapes_lrc34890	nematode larval development	developmental processes	P	60S ribosomal protein L10a
ruditapes_lrc34890	apoptosis	death	P	60S ribosomal protein L10a
ruditapes_lrc34890	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L10a
ruditapes_lrc34890	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L10a
ruditapes_lrc32938	reproduction	other biological processes	P	60S ribosomal protein L10a
ruditapes_lrc34890	growth	other biological processes	P	60S ribosomal protein L10a
ruditapes_lrc32938	apoptosis	death	P	60S ribosomal protein L10a
ruditapes_lrc34890	reproduction	other biological processes	P	60S ribosomal protein L10a
ruditapes_lrc34890	translation	protein metabolism	P	60S ribosomal protein L10a
ruditapes_lrc32938	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L10a
ruditapes_lrc32938	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L10a
ruditapes_lrc32938	translation	protein metabolism	P	60S ribosomal protein L10a
ruditapes_c19644	response to DNA damage stimulus	stress response	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	cellular process	other biological processes	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	cell division	other biological processes	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	DNA replication	DNA metabolism	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	gastrulation with mouth forming first	developmental processes	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	embryonic development	developmental processes	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	DNA repair	stress response	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	DNA repair	DNA metabolism	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	cytokinesis	other biological processes	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	"molting cycle, collagen and cuticulin-based cuticle"	other biological processes	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	"regulation of transcription, DNA-dependent"	RNA metabolism	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	nucleus organization	cell organization and biogenesis	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	embryonic development ending in birth or egg hatching	developmental processes	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c19644	"transcription, DNA-dependent"	RNA metabolism	P	FACT complex subunit spt-16 (Facilitates chromatin transcription complex subunit spt-16)
ruditapes_c25696	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative T-box protein 40
ruditapes_c25696	"transcription, DNA-dependent"	RNA metabolism	P	Putative T-box protein 40
ruditapes_c10644	translational initiation	protein metabolism	P	Density-regulated protein homolog
ruditapes_c9255	receptor-mediated endocytosis	transport	P	Partitioning defective protein 6
ruditapes_c9255	receptor-mediated endocytosis	cell organization and biogenesis	P	Partitioning defective protein 6
ruditapes_c9255	growth	other biological processes	P	Partitioning defective protein 6
ruditapes_c9255	cell division	other biological processes	P	Partitioning defective protein 6
ruditapes_c9255	nematode larval development	developmental processes	P	Partitioning defective protein 6
ruditapes_c9255	cell differentiation	other biological processes	P	Partitioning defective protein 6
ruditapes_c9255	gonad development	developmental processes	P	Partitioning defective protein 6
ruditapes_c9255	positive regulation of growth rate	other biological processes	P	Partitioning defective protein 6
ruditapes_c9255	positive regulation of multicellular organism growth	other biological processes	P	Partitioning defective protein 6
ruditapes_c9255	gonadal mesoderm development	developmental processes	P	Partitioning defective protein 6
ruditapes_c9255	establishment or maintenance of cell polarity	cell organization and biogenesis	P	Partitioning defective protein 6
ruditapes_c9255	establishment of mitotic spindle localization	cell cycle and proliferation	P	Partitioning defective protein 6
ruditapes_c9255	establishment of mitotic spindle localization	cell organization and biogenesis	P	Partitioning defective protein 6
ruditapes_c9255	embryonic development ending in birth or egg hatching	developmental processes	P	Partitioning defective protein 6
ruditapes_c9255	cell adhesion	cell adhesion	P	Partitioning defective protein 6
ruditapes_c9255	single fertilization	other biological processes	P	Partitioning defective protein 6
ruditapes_c9255	reproduction	other biological processes	P	Partitioning defective protein 6
ruditapes_c9255	cell cycle	cell cycle and proliferation	P	Partitioning defective protein 6
ruditapes_c9255	multicellular organismal development	developmental processes	P	Partitioning defective protein 6
ruditapes_c9255	gastrulation	developmental processes	P	Partitioning defective protein 6
ruditapes_c29422	embryonic development ending in birth or egg hatching	developmental processes	P	"28S ribosomal protein S15, mitochondrial (MRP-S15) (S15mt)"
ruditapes_c28442	protein folding	protein metabolism	P	T-complex protein 1 subunit delta (TCP-1-delta) (CCT-delta)
ruditapes_c28442	cellular protein metabolic process	protein metabolism	P	T-complex protein 1 subunit delta (TCP-1-delta) (CCT-delta)
ruditapes_c12507	RNA-dependent DNA replication	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon X-element (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c21531	RNA-dependent DNA replication	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon X-element (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c21531	"transposition, DNA-mediated"	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon X-element (EC 2.7.7.49) (Reverse transcriptase)
ruditapes_c12507	"transposition, DNA-mediated"	DNA metabolism	P	Probable RNA-directed DNA polymerase from transposon X-element (EC 2.7.7.49) (Reverse transcriptase)
ruditapes2_c2843	gonadal mesoderm development	developmental processes	P	Protein SDA1 homolog (Proximal proliferation in germline protein 3)
ruditapes2_c2843	positive regulation of growth rate	other biological processes	P	Protein SDA1 homolog (Proximal proliferation in germline protein 3)
ruditapes2_c2843	ribosome biogenesis	other biological processes	P	Protein SDA1 homolog (Proximal proliferation in germline protein 3)
ruditapes2_c2843	multicellular organismal development	developmental processes	P	Protein SDA1 homolog (Proximal proliferation in germline protein 3)
ruditapes2_c2843	receptor-mediated endocytosis	cell organization and biogenesis	P	Protein SDA1 homolog (Proximal proliferation in germline protein 3)
ruditapes2_c2843	cell differentiation	other biological processes	P	Protein SDA1 homolog (Proximal proliferation in germline protein 3)
ruditapes2_c2843	transport	transport	P	Protein SDA1 homolog (Proximal proliferation in germline protein 3)
ruditapes2_c2843	protein transport	transport	P	Protein SDA1 homolog (Proximal proliferation in germline protein 3)
ruditapes2_c2843	nematode larval development	developmental processes	P	Protein SDA1 homolog (Proximal proliferation in germline protein 3)
ruditapes2_c2843	growth	other biological processes	P	Protein SDA1 homolog (Proximal proliferation in germline protein 3)
ruditapes2_c2843	receptor-mediated endocytosis	transport	P	Protein SDA1 homolog (Proximal proliferation in germline protein 3)
ruditapes_c8798	glutathione biosynthetic process	other metabolic processes	P	Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-ECS) (GCS) (Gamma-glutamylcysteine synthetase)
ruditapes_c517	double-strand break repair via homologous recombination	stress response	P	DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase III alpha)
ruditapes_c517	double-strand break repair via homologous recombination	DNA metabolism	P	DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase III alpha)
ruditapes_c517	DNA topological change	DNA metabolism	P	DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase III alpha)
ruditapes_c26935	exocytosis	transport	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c31444	cell differentiation	other biological processes	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c26935	cell differentiation	other biological processes	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c31444	endosomal lumen acidification	cell organization and biogenesis	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c31444	transport	transport	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c26935	endocytosis	transport	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c31444	endocytosis	transport	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c31444	endocytosis	cell organization and biogenesis	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c26935	endocytosis	cell organization and biogenesis	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c31444	exocytosis	transport	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c31444	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c26935	endosomal lumen acidification	cell organization and biogenesis	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c26935	transport	transport	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c26935	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 2 (ABC transporter ABCG.2)
ruditapes_c17008	ecdysone biosynthetic process	other metabolic processes	P	"Cytochrome P450 302a1, mitochondrial (EC 1.14.99.-) (Protein disembodied)"
ruditapes_c17008	ecdysone biosynthetic process	developmental processes	P	"Cytochrome P450 302a1, mitochondrial (EC 1.14.99.-) (Protein disembodied)"
ruditapes_c17008	oxidation reduction	other metabolic processes	P	"Cytochrome P450 302a1, mitochondrial (EC 1.14.99.-) (Protein disembodied)"
ruditapes_c17008	midgut development	developmental processes	P	"Cytochrome P450 302a1, mitochondrial (EC 1.14.99.-) (Protein disembodied)"
ruditapes_c17008	dorsal closure	developmental processes	P	"Cytochrome P450 302a1, mitochondrial (EC 1.14.99.-) (Protein disembodied)"
ruditapes_c17008	central nervous system development	developmental processes	P	"Cytochrome P450 302a1, mitochondrial (EC 1.14.99.-) (Protein disembodied)"
ruditapes_c17008	chitin-based embryonic cuticle biosynthetic process	developmental processes	P	"Cytochrome P450 302a1, mitochondrial (EC 1.14.99.-) (Protein disembodied)"
ruditapes_c17008	head involution	developmental processes	P	"Cytochrome P450 302a1, mitochondrial (EC 1.14.99.-) (Protein disembodied)"
ruditapes_c24323	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	gene silencing	other metabolic processes	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	germ-line sex determination	developmental processes	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	determination of adult life span	developmental processes	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	multicellular organismal development	developmental processes	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	RNA interference	other metabolic processes	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	reproduction	other biological processes	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	histone H3-K36 methylation	protein metabolism	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	histone H3-K36 methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	histone methylation	protein metabolism	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	histone methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	negative regulation of vulval development	developmental processes	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	embryonic development ending in birth or egg hatching	developmental processes	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c24323	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase mes-4 (EC 2.1.1.43) (Maternal-effect sterile protein 4)
ruditapes_c17036	innate immune response	stress response	P	Gram-negative bacteria-binding protein 3
ruditapes_c17036	regulation of innate immune response	stress response	P	Gram-negative bacteria-binding protein 3
ruditapes_c17036	carbohydrate metabolic process	other metabolic processes	P	Gram-negative bacteria-binding protein 3
ruditapes_c17036	response to fungus	other biological processes	P	Gram-negative bacteria-binding protein 3
ruditapes_c11023	adult behavior	other biological processes	P	Double-stranded RNA-specific editase Adar (EC 3.5.-.-) (Adenosine deaminase that act on RNA) (Pre-mRNA adenosine deaminase) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dADAR) (dsRNA adenosine deaminase)
ruditapes_c11023	mRNA modification	RNA metabolism	P	Double-stranded RNA-specific editase Adar (EC 3.5.-.-) (Adenosine deaminase that act on RNA) (Pre-mRNA adenosine deaminase) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dADAR) (dsRNA adenosine deaminase)
ruditapes_c11023	adenosine to inosine editing	RNA metabolism	P	Double-stranded RNA-specific editase Adar (EC 3.5.-.-) (Adenosine deaminase that act on RNA) (Pre-mRNA adenosine deaminase) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dADAR) (dsRNA adenosine deaminase)
ruditapes_c11023	adult locomotory behavior	other biological processes	P	Double-stranded RNA-specific editase Adar (EC 3.5.-.-) (Adenosine deaminase that act on RNA) (Pre-mRNA adenosine deaminase) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dADAR) (dsRNA adenosine deaminase)
ruditapes_c11023	response to heat	stress response	P	Double-stranded RNA-specific editase Adar (EC 3.5.-.-) (Adenosine deaminase that act on RNA) (Pre-mRNA adenosine deaminase) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dADAR) (dsRNA adenosine deaminase)
ruditapes_c11023	RNA processing	RNA metabolism	P	Double-stranded RNA-specific editase Adar (EC 3.5.-.-) (Adenosine deaminase that act on RNA) (Pre-mRNA adenosine deaminase) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dADAR) (dsRNA adenosine deaminase)
ruditapes_c11023	locomotory behavior	other biological processes	P	Double-stranded RNA-specific editase Adar (EC 3.5.-.-) (Adenosine deaminase that act on RNA) (Pre-mRNA adenosine deaminase) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dADAR) (dsRNA adenosine deaminase)
ruditapes_c11023	response to oxidative stress	stress response	P	Double-stranded RNA-specific editase Adar (EC 3.5.-.-) (Adenosine deaminase that act on RNA) (Pre-mRNA adenosine deaminase) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dADAR) (dsRNA adenosine deaminase)
ruditapes_c11023	response to hypoxia	stress response	P	Double-stranded RNA-specific editase Adar (EC 3.5.-.-) (Adenosine deaminase that act on RNA) (Pre-mRNA adenosine deaminase) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dADAR) (dsRNA adenosine deaminase)
ruditapes_c11023	regulation of membrane potential	other biological processes	P	Double-stranded RNA-specific editase Adar (EC 3.5.-.-) (Adenosine deaminase that act on RNA) (Pre-mRNA adenosine deaminase) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dADAR) (dsRNA adenosine deaminase)
ruditapes_c11023	mRNA processing	RNA metabolism	P	Double-stranded RNA-specific editase Adar (EC 3.5.-.-) (Adenosine deaminase that act on RNA) (Pre-mRNA adenosine deaminase) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dADAR) (dsRNA adenosine deaminase)
ruditapes2_lrc5234	multicellular organismal development	developmental processes	P	Calcium-dependent protein kinase 3 (EC 2.7.11.1) (PfCDPK3)
ruditapes2_lrc5234	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 3 (EC 2.7.11.1) (PfCDPK3)
ruditapes2_lrc5234	cell differentiation	other biological processes	P	Calcium-dependent protein kinase 3 (EC 2.7.11.1) (PfCDPK3)
ruditapes2_lrc5234	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 3 (EC 2.7.11.1) (PfCDPK3)
ruditapes_c14287	innate immune response	stress response	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	cell adhesion	cell adhesion	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	virus-host interaction	other biological processes	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	heterophilic cell adhesion	cell adhesion	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	virion attachment to host cell surface receptor	other biological processes	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	peptide antigen transport	transport	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	antigen processing and presentation	other biological processes	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	viral genome replication	other biological processes	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	leukocyte adhesion	cell adhesion	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	endocytosis	transport	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	endocytosis	cell organization and biogenesis	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	interspecies interaction between organisms	other biological processes	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	intracellular virion transport	transport	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_c14287	cell-cell recognition	other biological processes	P	CD209 antigen (C-type lectin domain family 4 member L) (Dendritic cell-specific ICAM-3-grabbing non-integrin 1) (DC-SIGN) (DC-SIGN1) (CD antigen CD209)
ruditapes_lrc36400	signal transduction	signal transduction	P	Calcium-binding protein 5 (CaBP5)
ruditapes_c20401	nervous system development	developmental processes	P	Semaphorin-4B
ruditapes_c20401	multicellular organismal development	developmental processes	P	Semaphorin-4B
ruditapes_c20401	cell differentiation	other biological processes	P	Semaphorin-4B
ruditapes2_c2220	metabolic process	other metabolic processes	P	Histidine triad nucleotide-binding protein 3 (HINT-3) (EC 3.-.-.-)
ruditapes_c21492	proteolysis	protein metabolism	P	Probable Xaa-Pro aminopeptidase 3 (X-Pro aminopeptidase 3) (EC 3.4.11.9) (Aminopeptidase P3) (APP3)
ruditapes_c7073	proteolysis	protein metabolism	P	Probable Xaa-Pro aminopeptidase 3 (X-Pro aminopeptidase 3) (EC 3.4.11.9) (Aminopeptidase P3) (APP3)
ruditapes_c7073	cellular process	other biological processes	P	Probable Xaa-Pro aminopeptidase 3 (X-Pro aminopeptidase 3) (EC 3.4.11.9) (Aminopeptidase P3) (APP3)
ruditapes_c21492	cellular process	other biological processes	P	Probable Xaa-Pro aminopeptidase 3 (X-Pro aminopeptidase 3) (EC 3.4.11.9) (Aminopeptidase P3) (APP3)
ruditapes_c11225	protein targeting	transport	P	Kinesin-like protein KIF13B (Kinesin-like protein GAKIN)
ruditapes_c11225	signal transduction	signal transduction	P	Kinesin-like protein KIF13B (Kinesin-like protein GAKIN)
ruditapes_c11225	regulation of axonogenesis	developmental processes	P	Kinesin-like protein KIF13B (Kinesin-like protein GAKIN)
ruditapes_c11225	regulation of axonogenesis	cell organization and biogenesis	P	Kinesin-like protein KIF13B (Kinesin-like protein GAKIN)
ruditapes_c11225	T cell activation	other biological processes	P	Kinesin-like protein KIF13B (Kinesin-like protein GAKIN)
ruditapes_c11225	microtubule-based movement	other biological processes	P	Kinesin-like protein KIF13B (Kinesin-like protein GAKIN)
ruditapes_c25466	transport	transport	P	Cyclic nucleotide-gated cation channel beta-3 (Cone photoreceptor cGMP-gated channel subunit beta) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-3) (CNG channel beta-3)
ruditapes_c25466	cation transport	transport	P	Cyclic nucleotide-gated cation channel beta-3 (Cone photoreceptor cGMP-gated channel subunit beta) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-3) (CNG channel beta-3)
ruditapes_c25466	transmembrane transport	transport	P	Cyclic nucleotide-gated cation channel beta-3 (Cone photoreceptor cGMP-gated channel subunit beta) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-3) (CNG channel beta-3)
ruditapes_c25466	transmembrane ion transport	transport	P	Cyclic nucleotide-gated cation channel beta-3 (Cone photoreceptor cGMP-gated channel subunit beta) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-3) (CNG channel beta-3)
ruditapes_c25466	ion transport	transport	P	Cyclic nucleotide-gated cation channel beta-3 (Cone photoreceptor cGMP-gated channel subunit beta) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-3) (CNG channel beta-3)
ruditapes_c25466	signal transduction	signal transduction	P	Cyclic nucleotide-gated cation channel beta-3 (Cone photoreceptor cGMP-gated channel subunit beta) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-3) (CNG channel beta-3)
ruditapes_c25466	visual perception	other biological processes	P	Cyclic nucleotide-gated cation channel beta-3 (Cone photoreceptor cGMP-gated channel subunit beta) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-3) (CNG channel beta-3)
ruditapes_c25466	response to stimulus	other biological processes	P	Cyclic nucleotide-gated cation channel beta-3 (Cone photoreceptor cGMP-gated channel subunit beta) (Cyclic nucleotide-gated cation channel modulatory subunit) (Cyclic nucleotide-gated channel beta-3) (CNG channel beta-3)
ruditapes2_c1645	mitotic cell cycle	cell cycle and proliferation	P	PR domain zinc finger protein 5 (PR domain-containing protein 5)
ruditapes2_c1645	histone H3-K9 methylation	protein metabolism	P	PR domain zinc finger protein 5 (PR domain-containing protein 5)
ruditapes2_c1645	histone H3-K9 methylation	cell organization and biogenesis	P	PR domain zinc finger protein 5 (PR domain-containing protein 5)
ruditapes2_c1645	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 5 (PR domain-containing protein 5)
ruditapes2_c1645	"transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 5 (PR domain-containing protein 5)
ruditapes2_c1645	chromatin modification	cell organization and biogenesis	P	PR domain zinc finger protein 5 (PR domain-containing protein 5)
ruditapes2_c1645	histone deacetylation	protein metabolism	P	PR domain zinc finger protein 5 (PR domain-containing protein 5)
ruditapes2_c1645	histone deacetylation	cell organization and biogenesis	P	PR domain zinc finger protein 5 (PR domain-containing protein 5)
ruditapes2_c1645	"regulation of transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 5 (PR domain-containing protein 5)
ruditapes_c24006	protein ubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c12676	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c24006	anti-apoptosis	death	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c12676	labyrinthine layer development	developmental processes	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c24006	labyrinthine layer development	developmental processes	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c24006	spongiotrophoblast layer development	developmental processes	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c12676	spongiotrophoblast layer development	developmental processes	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c24006	apoptosis	death	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c12676	protein ubiquitination	protein metabolism	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c24006	regulation of cell proliferation	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c12676	apoptosis	death	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c12676	positive regulation of cell proliferation	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c24006	positive regulation of cell proliferation	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c12676	regulation of cell proliferation	cell cycle and proliferation	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c12676	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes_c24006	negative regulation of peptidase activity	other biological processes	P	Baculoviral IAP repeat-containing protein 6 (EC 6.3.2.-) (BIR repeat-containing ubiquitin-conjugating enzyme) (BRUCE) (Ubiquitin-conjugating BIR domain enzyme apollon) (APOLLON)
ruditapes2_c2365	transport	transport	P	Eukaryotic translation initiation factor 4E transporter (4E-T) (eIF4E transporter) (Eukaryotic translation initiation factor 4E nuclear import factor 1)
ruditapes2_c2365	protein transport	transport	P	Eukaryotic translation initiation factor 4E transporter (4E-T) (eIF4E transporter) (Eukaryotic translation initiation factor 4E nuclear import factor 1)
ruditapes_c16244	cytokine-mediated signaling pathway	signal transduction	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	inner ear development	developmental processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	response to virus	other biological processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	cuticle development	developmental processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	hormone biosynthetic process	other metabolic processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	thyroid hormone metabolic process	other metabolic processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	response to cAMP	other biological processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	oxidation reduction	other metabolic processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	response to oxidative stress	stress response	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	bone mineralization	developmental processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	hydrogen peroxide catabolic process	stress response	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	hydrogen peroxide catabolic process	other metabolic processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	multicellular organism growth	other biological processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	thyroid gland development	developmental processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	fertilization	other biological processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	adenohypophysis morphogenesis	developmental processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c16244	hormone metabolic process	other metabolic processes	P	Dual oxidase 2 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)
ruditapes_c7729	hydrogen peroxide biosynthetic process	other metabolic processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 1) (Long NOX 1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c7729	response to cAMP	other biological processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 1) (Long NOX 1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c7729	response to oxidative stress	stress response	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 1) (Long NOX 1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c7729	cuticle development	developmental processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 1) (Long NOX 1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c7729	hormone biosynthetic process	other metabolic processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 1) (Long NOX 1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c7729	cytokine-mediated signaling pathway	signal transduction	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 1) (Long NOX 1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c7729	superoxide anion generation	other metabolic processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 1) (Long NOX 1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c7729	hydrogen peroxide catabolic process	stress response	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 1) (Long NOX 1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c7729	hydrogen peroxide catabolic process	other metabolic processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 1) (Long NOX 1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c7729	oxidation reduction	other metabolic processes	P	Dual oxidase 1 (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 1) (Long NOX 1) (NADPH thyroid oxidase 1) (Thyroid oxidase 1)
ruditapes_c14023	chromatin remodeling	cell organization and biogenesis	P	Bromodomain adjacent to zinc finger domain protein 1A (ATP-dependent chromatin-remodeling protein) (ATP-utilizing chromatin assembly and remodeling factor 1) (hACF1) (CHRAC subunit ACF1) (Williams syndrome transcription factor-related chromatin-remodeling factor 180) (WCRF180) (hWALp1)
ruditapes_c14023	DNA-dependent DNA replication	DNA metabolism	P	Bromodomain adjacent to zinc finger domain protein 1A (ATP-dependent chromatin-remodeling protein) (ATP-utilizing chromatin assembly and remodeling factor 1) (hACF1) (CHRAC subunit ACF1) (Williams syndrome transcription factor-related chromatin-remodeling factor 180) (WCRF180) (hWALp1)
ruditapes_c14023	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Bromodomain adjacent to zinc finger domain protein 1A (ATP-dependent chromatin-remodeling protein) (ATP-utilizing chromatin assembly and remodeling factor 1) (hACF1) (CHRAC subunit ACF1) (Williams syndrome transcription factor-related chromatin-remodeling factor 180) (WCRF180) (hWALp1)
ruditapes_c14023	"transcription, DNA-dependent"	RNA metabolism	P	Bromodomain adjacent to zinc finger domain protein 1A (ATP-dependent chromatin-remodeling protein) (ATP-utilizing chromatin assembly and remodeling factor 1) (hACF1) (CHRAC subunit ACF1) (Williams syndrome transcription factor-related chromatin-remodeling factor 180) (WCRF180) (hWALp1)
ruditapes_s39177	proteolysis	protein metabolism	P	Tryptase gamma (EC 3.4.21.-) (Serine protease 31) (Transmembrane tryptase) [Cleaved into: Tryptase gamma light chain; Tryptase gamma heavy chain]
ruditapes2_c1267	mRNA processing	RNA metabolism	P	Double-stranded RNA-specific editase B2 (EC 3.5.-.-) (RNA-dependent adenosine deaminase 3) (RNA-editing deaminase 2) (RNA-editing enzyme 2) (dsRNA adenosine deaminase B2)
ruditapes2_c1267	RNA processing	RNA metabolism	P	Double-stranded RNA-specific editase B2 (EC 3.5.-.-) (RNA-dependent adenosine deaminase 3) (RNA-editing deaminase 2) (RNA-editing enzyme 2) (dsRNA adenosine deaminase B2)
ruditapes_c12564	DNA repair	stress response	P	E3 ubiquitin-protein ligase RAD18 (EC 6.3.2.-) (Postreplication repair protein RAD18) (hHR18) (hRAD18) (RING finger protein 73)
ruditapes_c12564	DNA repair	DNA metabolism	P	E3 ubiquitin-protein ligase RAD18 (EC 6.3.2.-) (Postreplication repair protein RAD18) (hHR18) (hRAD18) (RING finger protein 73)
ruditapes_c12564	spermatogenesis	other biological processes	P	E3 ubiquitin-protein ligase RAD18 (EC 6.3.2.-) (Postreplication repair protein RAD18) (hHR18) (hRAD18) (RING finger protein 73)
ruditapes_c12564	negative regulation of DNA recombination	DNA metabolism	P	E3 ubiquitin-protein ligase RAD18 (EC 6.3.2.-) (Postreplication repair protein RAD18) (hHR18) (hRAD18) (RING finger protein 73)
ruditapes_c12564	response to UV	other biological processes	P	E3 ubiquitin-protein ligase RAD18 (EC 6.3.2.-) (Postreplication repair protein RAD18) (hHR18) (hRAD18) (RING finger protein 73)
ruditapes_c12564	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase RAD18 (EC 6.3.2.-) (Postreplication repair protein RAD18) (hHR18) (hRAD18) (RING finger protein 73)
ruditapes_c27938	protein amino acid phosphorylation	protein metabolism	P	BMP-2-inducible protein kinase (BIKe) (EC 2.7.11.1)
ruditapes_c27938	phosphorylation	other metabolic processes	P	BMP-2-inducible protein kinase (BIKe) (EC 2.7.11.1)
ruditapes_c27938	regulation of catalytic activity	other biological processes	P	BMP-2-inducible protein kinase (BIKe) (EC 2.7.11.1)
ruditapes_c27938	regulation of bone mineralization	developmental processes	P	BMP-2-inducible protein kinase (BIKe) (EC 2.7.11.1)
ruditapes_c14114	copper ion transport	transport	P	Copper homeostasis protein cutC homolog
ruditapes_c14114	copper ion homeostasis	other biological processes	P	Copper homeostasis protein cutC homolog
ruditapes_c14114	protein tetramerization	cell organization and biogenesis	P	Copper homeostasis protein cutC homolog
ruditapes_c29277	carbohydrate transport	transport	P	UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP-GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7)
ruditapes_c29277	transport	transport	P	UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP-GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7)
ruditapes_c29277	xenobiotic metabolic process	other metabolic processes	P	UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP-GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7)
ruditapes_c29277	UDP-glucuronic acid transport	transport	P	UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP-GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7)
ruditapes_c29277	transmembrane transport	transport	P	UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP-GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7)
ruditapes_c29277	chondroitin sulfate biosynthetic process	other metabolic processes	P	UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP-GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7)
ruditapes_c29277	UDP-N-acetylgalactosamine transport	transport	P	UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP-GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7)
ruditapes_c29277	UDP-glucuronate biosynthetic process	other metabolic processes	P	UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter (UDP-GlcA/UDP-GalNAc transporter) (Solute carrier family 35 member D1) (UDP-galactose transporter-related protein 7) (UGTrel7)
ruditapes_c19719	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Zinc finger protein 64 homolog, isoforms 3 and 4 (Zfp-64) (Zinc finger protein 338)"
ruditapes_c19719	"transcription, DNA-dependent"	RNA metabolism	P	"Zinc finger protein 64 homolog, isoforms 3 and 4 (Zfp-64) (Zinc finger protein 338)"
ruditapes_c16719	response to DNA damage stimulus	stress response	P	AP-5 complex subunit sigma-1 (Adapter-related protein complex 5 sigma subunit) (Sigma5)
ruditapes_c16719	DNA repair	stress response	P	AP-5 complex subunit sigma-1 (Adapter-related protein complex 5 sigma subunit) (Sigma5)
ruditapes_c16719	DNA repair	DNA metabolism	P	AP-5 complex subunit sigma-1 (Adapter-related protein complex 5 sigma subunit) (Sigma5)
ruditapes_c16719	double-strand break repair via homologous recombination	stress response	P	AP-5 complex subunit sigma-1 (Adapter-related protein complex 5 sigma subunit) (Sigma5)
ruditapes_c16719	double-strand break repair via homologous recombination	DNA metabolism	P	AP-5 complex subunit sigma-1 (Adapter-related protein complex 5 sigma subunit) (Sigma5)
ruditapes_c33182	fatty acid beta-oxidation	other metabolic processes	P	Acyl-coenzyme A oxidase-like protein (Acyl-CoA oxidase-like protein) (EC 1.3.3.-)
ruditapes_c33182	metabolic process	other metabolic processes	P	Acyl-coenzyme A oxidase-like protein (Acyl-CoA oxidase-like protein) (EC 1.3.3.-)
ruditapes_c33182	oxidation reduction	other metabolic processes	P	Acyl-coenzyme A oxidase-like protein (Acyl-CoA oxidase-like protein) (EC 1.3.3.-)
ruditapes_c26614	"regulation of transcription, DNA-dependent"	RNA metabolism	P	MRG/MORF4L-binding protein (MRG-binding protein)
ruditapes_c26614	regulation of growth	other biological processes	P	MRG/MORF4L-binding protein (MRG-binding protein)
ruditapes_c26614	chromatin modification	cell organization and biogenesis	P	MRG/MORF4L-binding protein (MRG-binding protein)
ruditapes_c26614	"transcription, DNA-dependent"	RNA metabolism	P	MRG/MORF4L-binding protein (MRG-binding protein)
ruditapes_c13676	transport	transport	P	Exocyst complex component 1 (Exocyst complex component Sec3)
ruditapes_c13676	exocytosis	transport	P	Exocyst complex component 1 (Exocyst complex component Sec3)
ruditapes_c13676	protein transport	transport	P	Exocyst complex component 1 (Exocyst complex component Sec3)
ruditapes_lrc17751	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone receptor-associated protein complex 80 kDa component) (Trap80) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80)
ruditapes_lrc17751	gene expression	other metabolic processes	P	Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone receptor-associated protein complex 80 kDa component) (Trap80) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80)
ruditapes_lrc17751	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone receptor-associated protein complex 80 kDa component) (Trap80) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80)
ruditapes_lrc17751	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone receptor-associated protein complex 80 kDa component) (Trap80) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80)
ruditapes_lrc17751	transcription initiation from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone receptor-associated protein complex 80 kDa component) (Trap80) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80)
ruditapes_lrc17751	transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone receptor-associated protein complex 80 kDa component) (Trap80) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80)
ruditapes_lrc17751	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone receptor-associated protein complex 80 kDa component) (Trap80) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80)
ruditapes_lrc17751	steroid hormone receptor signaling pathway	signal transduction	P	Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone receptor-associated protein complex 80 kDa component) (Trap80) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80)
ruditapes_lrc17751	androgen receptor signaling pathway	signal transduction	P	Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone receptor-associated protein complex 80 kDa component) (Trap80) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80)
ruditapes_lrc17751	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone receptor-associated protein complex 80 kDa component) (Trap80) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80)
ruditapes_c8580	cell cycle	cell cycle and proliferation	P	Fanconi anemia group I protein (Protein FACI)
ruditapes_c8580	response to DNA damage stimulus	stress response	P	Fanconi anemia group I protein (Protein FACI)
ruditapes_c8580	DNA repair	stress response	P	Fanconi anemia group I protein (Protein FACI)
ruditapes_c8580	DNA repair	DNA metabolism	P	Fanconi anemia group I protein (Protein FACI)
ruditapes_c25626	regulation of G-protein coupled receptor protein signaling pathway	signal transduction	P	Synembryn-B (Brain synembryn) (hSyn) (Protein Ric-8B)
ruditapes2_c5762	translation	protein metabolism	P	"28S ribosomal protein S18a, mitochondrial (MRP-S18-a) (Mrps18a) (S18mt-a) (28S ribosomal protein S18-3, mitochondrial) (MRP-S18-3)"
ruditapes_lrc35446	translation	protein metabolism	P	"28S ribosomal protein S18a, mitochondrial (MRP-S18-a) (Mrps18a) (S18mt-a) (28S ribosomal protein S18-3, mitochondrial) (MRP-S18-3)"
ruditapes_lrc34641	translation	protein metabolism	P	"28S ribosomal protein S18a, mitochondrial (MRP-S18-a) (Mrps18a) (S18mt-a) (28S ribosomal protein S18-3, mitochondrial) (MRP-S18-3)"
ruditapes_c31431	response to virus	other biological processes	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (DNA-directed RNA polymerase III subunit B)
ruditapes_c31431	innate immune response	stress response	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (DNA-directed RNA polymerase III subunit B)
ruditapes_c31431	transcription from RNA polymerase III promoter	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (DNA-directed RNA polymerase III subunit B)
ruditapes_c31431	RNA elongation from RNA polymerase III promoter	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (DNA-directed RNA polymerase III subunit B)
ruditapes_c31431	positive regulation of interferon-beta production	other biological processes	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (DNA-directed RNA polymerase III subunit B)
ruditapes_c31431	positive regulation of innate immune response	stress response	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (DNA-directed RNA polymerase III subunit B)
ruditapes_c31431	gene expression	other metabolic processes	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (DNA-directed RNA polymerase III subunit B)
ruditapes_c31431	termination of RNA polymerase III transcription	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (DNA-directed RNA polymerase III subunit B)
ruditapes_c31431	termination of RNA polymerase III transcription	cell organization and biogenesis	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (DNA-directed RNA polymerase III subunit B)
ruditapes_c31431	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (DNA-directed RNA polymerase III subunit B)
ruditapes_c12533	DNA repair	stress response	P	E3 ubiquitin-protein ligase FANCL (EC 6.3.2.-) (Fanconi anemia group L protein) (Fanconi anemia-associated polypeptide of 43 kDa) (FAAP43)
ruditapes_c12533	DNA repair	DNA metabolism	P	E3 ubiquitin-protein ligase FANCL (EC 6.3.2.-) (Fanconi anemia group L protein) (Fanconi anemia-associated polypeptide of 43 kDa) (FAAP43)
ruditapes_c12533	response to DNA damage stimulus	stress response	P	E3 ubiquitin-protein ligase FANCL (EC 6.3.2.-) (Fanconi anemia group L protein) (Fanconi anemia-associated polypeptide of 43 kDa) (FAAP43)
ruditapes_c12533	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase FANCL (EC 6.3.2.-) (Fanconi anemia group L protein) (Fanconi anemia-associated polypeptide of 43 kDa) (FAAP43)
ruditapes_c16096	negative regulation of phosphatase activity	other metabolic processes	P	G patch domain-containing protein 2
ruditapes_c142	lipid catabolic process	other metabolic processes	P	HRAS-like suppressor 2 (EC 2.3.1.-) (EC 3.1.1.-)
ruditapes_c16868	protein transport	transport	P	Ras-related protein Rab-20
ruditapes_c16868	transport	transport	P	Ras-related protein Rab-20
ruditapes_c16868	small GTPase mediated signal transduction	signal transduction	P	Ras-related protein Rab-20
ruditapes_lrc36170	mitochondrial fusion	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc34434	inner mitochondrial membrane organization	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc34674	inner mitochondrial membrane organization	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc36170	inner mitochondrial membrane organization	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc34434	mitochondrial fusion	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_lrc34674	mitochondrial fusion	cell organization and biogenesis	P	"Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial"
ruditapes_c23148	transmembrane calcium ion transport	transport	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	regulation of transmembrane ion transport	transport	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	muscle fiber development	developmental processes	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	rhythmic synaptic transmission	cell-cell signaling	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	ion transport	transport	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	regulation of insulin secretion	transport	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	regulation of multicellular organism growth	other biological processes	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	energy reserve metabolic process	other metabolic processes	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	calcium ion transport	transport	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	regulation of insulin secretion	cell-cell signaling	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	neuromuscular junction development	developmental processes	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	neuromuscular junction development	cell organization and biogenesis	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	positive regulation of organ growth	other biological processes	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes_c23148	transport	transport	P	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]
ruditapes2_c1006	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 9, axonemal (Axonemal beta dynein heavy chain 9) (Ciliary dynein heavy chain 9)"
ruditapes2_c1006	cell projection organization	cell organization and biogenesis	P	"Dynein heavy chain 9, axonemal (Axonemal beta dynein heavy chain 9) (Ciliary dynein heavy chain 9)"
ruditapes2_c1006	microtubule-based movement	other biological processes	P	"Dynein heavy chain 9, axonemal (Axonemal beta dynein heavy chain 9) (Ciliary dynein heavy chain 9)"
ruditapes2_c1006	cell motion	other biological processes	P	"Dynein heavy chain 9, axonemal (Axonemal beta dynein heavy chain 9) (Ciliary dynein heavy chain 9)"
ruditapes2_c1006	spermatogenesis	other biological processes	P	"Dynein heavy chain 9, axonemal (Axonemal beta dynein heavy chain 9) (Ciliary dynein heavy chain 9)"
ruditapes_c29622	phospholipid metabolic process	other metabolic processes	P	Group 3 secretory phospholipase A2 (EC 3.1.1.4) (Group III secretory phospholipase A2) (GIII sPLA2) (sPLA2-III) (Phosphatidylcholine 2-acylhydrolase 3)
ruditapes_c29622	cilium morphogenesis	cell organization and biogenesis	P	Group 3 secretory phospholipase A2 (EC 3.1.1.4) (Group III secretory phospholipase A2) (GIII sPLA2) (sPLA2-III) (Phosphatidylcholine 2-acylhydrolase 3)
ruditapes_c29622	cell projection organization	cell organization and biogenesis	P	Group 3 secretory phospholipase A2 (EC 3.1.1.4) (Group III secretory phospholipase A2) (GIII sPLA2) (sPLA2-III) (Phosphatidylcholine 2-acylhydrolase 3)
ruditapes_c29622	lipid catabolic process	other metabolic processes	P	Group 3 secretory phospholipase A2 (EC 3.1.1.4) (Group III secretory phospholipase A2) (GIII sPLA2) (sPLA2-III) (Phosphatidylcholine 2-acylhydrolase 3)
ruditapes2_c2710	translation	protein metabolism	P	"39S ribosomal protein L35, mitochondrial (L35mt) (MRP-L35)"
ruditapes2_c1242	tissue regeneration	stress response	P	Ninjurin-2 (Nerve injury-induced protein 2)
ruditapes2_c1242	tissue regeneration	developmental processes	P	Ninjurin-2 (Nerve injury-induced protein 2)
ruditapes2_c1242	cell adhesion	cell adhesion	P	Ninjurin-2 (Nerve injury-induced protein 2)
ruditapes2_c1242	nervous system development	developmental processes	P	Ninjurin-2 (Nerve injury-induced protein 2)
ruditapes2_c1242	neuron adhesion	cell adhesion	P	Ninjurin-2 (Nerve injury-induced protein 2)
ruditapes_c6198	cell death	death	P	Sacsin (DnaJ homolog subfamily C member 29) (DNAJC29)
ruditapes_c13319	cell death	death	P	Sacsin (DnaJ homolog subfamily C member 29) (DNAJC29)
ruditapes_c6198	protein folding	protein metabolism	P	Sacsin (DnaJ homolog subfamily C member 29) (DNAJC29)
ruditapes_c13319	protein folding	protein metabolism	P	Sacsin (DnaJ homolog subfamily C member 29) (DNAJC29)
ruditapes2_c1414	biological_process	other biological processes	P	Glioma tumor suppressor candidate region gene 2 protein (p60)
ruditapes_c28867	biological_process	other biological processes	P	Glioma tumor suppressor candidate region gene 2 protein (p60)
ruditapes_c2940	biological_process	other biological processes	P	Glioma tumor suppressor candidate region gene 2 protein (p60)
ruditapes_c4325	epidermis development	developmental processes	P	Calmodulin-like protein 5 (Calmodulin-like skin protein)
ruditapes_c4325	signal transduction	signal transduction	P	Calmodulin-like protein 5 (Calmodulin-like skin protein)
ruditapes_c7268	protein complex assembly	cell organization and biogenesis	P	MAGUK p55 subfamily member 6 (Veli-associated MAGUK 1) (VAM-1)
ruditapes_c18401	mitochondrial respiratory chain complex I assembly	cell organization and biogenesis	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 (Hormone-regulated proliferation-associated protein of 20 kDa)
ruditapes_lrc12270	ion transport	transport	P	Polycystic kidney disease 2-like 1 protein (Polycystin-2 homolog) (Polycystin-2L1) (Polycystin-L) (Polycystin-L1)
ruditapes_lrc12270	signal transduction	signal transduction	P	Polycystic kidney disease 2-like 1 protein (Polycystin-2 homolog) (Polycystin-2L1) (Polycystin-L) (Polycystin-L1)
ruditapes_lrc25295	ion transport	transport	P	Polycystic kidney disease 2-like 1 protein (Polycystin-2 homolog) (Polycystin-2L1) (Polycystin-L) (Polycystin-L1)
ruditapes_lrc12270	transmembrane ion transport	transport	P	Polycystic kidney disease 2-like 1 protein (Polycystin-2 homolog) (Polycystin-2L1) (Polycystin-L) (Polycystin-L1)
ruditapes_lrc12270	transport	transport	P	Polycystic kidney disease 2-like 1 protein (Polycystin-2 homolog) (Polycystin-2L1) (Polycystin-L) (Polycystin-L1)
ruditapes_lrc25295	signal transduction	signal transduction	P	Polycystic kidney disease 2-like 1 protein (Polycystin-2 homolog) (Polycystin-2L1) (Polycystin-L) (Polycystin-L1)
ruditapes_lrc25295	cation transport	transport	P	Polycystic kidney disease 2-like 1 protein (Polycystin-2 homolog) (Polycystin-2L1) (Polycystin-L) (Polycystin-L1)
ruditapes_lrc12270	cation transport	transport	P	Polycystic kidney disease 2-like 1 protein (Polycystin-2 homolog) (Polycystin-2L1) (Polycystin-L) (Polycystin-L1)
ruditapes_lrc25295	transmembrane ion transport	transport	P	Polycystic kidney disease 2-like 1 protein (Polycystin-2 homolog) (Polycystin-2L1) (Polycystin-L) (Polycystin-L1)
ruditapes_lrc25295	transport	transport	P	Polycystic kidney disease 2-like 1 protein (Polycystin-2 homolog) (Polycystin-2L1) (Polycystin-L) (Polycystin-L1)
ruditapes2_c1770	biological_process	other biological processes	P	A-kinase anchor protein 7 isoform gamma (AKAP-7 isoform gamma) (A-kinase anchor protein 18 kDa) (AKAP 18) (Protein kinase A-anchoring protein 7 isoform gamma) (PRKA7 isoform gamma)
ruditapes2_c1770	RNA metabolic process	RNA metabolism	P	A-kinase anchor protein 7 isoform gamma (AKAP-7 isoform gamma) (A-kinase anchor protein 18 kDa) (AKAP 18) (Protein kinase A-anchoring protein 7 isoform gamma) (PRKA7 isoform gamma)
ruditapes2_c1770	regulation of protein kinase A signaling cascade	signal transduction	P	A-kinase anchor protein 7 isoform gamma (AKAP-7 isoform gamma) (A-kinase anchor protein 18 kDa) (AKAP 18) (Protein kinase A-anchoring protein 7 isoform gamma) (PRKA7 isoform gamma)
ruditapes_lrc39179	heme biosynthetic process	other metabolic processes	P	Transmembrane protein 14C
ruditapes2_c6540	heme biosynthetic process	other metabolic processes	P	Transmembrane protein 14C
ruditapes_lrc11372	heme biosynthetic process	other metabolic processes	P	Transmembrane protein 14C
ruditapes2_c3923	heme biosynthetic process	other metabolic processes	P	Transmembrane protein 14C
ruditapes2_c5995	intracellular protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c876	transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c794	protein targeting to mitochondrion	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c794	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c3474	protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes_c3817	protein targeting to mitochondrion	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c876	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c5995	protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes_c2839	protein targeting to mitochondrion	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes_c2839	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c794	transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes_c3817	intracellular protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes_c3817	protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c876	protein targeting to mitochondrion	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c876	intracellular protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c794	protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes_c3817	transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes_c2839	transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c3474	intracellular protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c876	protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c3474	protein targeting to mitochondrion	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c3474	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes_c2839	protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c5995	transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes_c3817	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes_c2839	intracellular protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c3474	transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c794	intracellular protein transport	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c5995	protein targeting to mitochondrion	transport	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes2_c5995	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import receptor subunit TOM7 homolog (Translocase of outer membrane 7 kDa subunit homolog)
ruditapes_c27863	regulation of calcium ion transport via voltage-gated calcium channel activity	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1I (Voltage-gated calcium channel subunit alpha Cav3.3) (Ca(v)3.3)
ruditapes_c27863	calcium ion transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1I (Voltage-gated calcium channel subunit alpha Cav3.3) (Ca(v)3.3)
ruditapes_c27863	signal transduction	signal transduction	P	Voltage-dependent T-type calcium channel subunit alpha-1I (Voltage-gated calcium channel subunit alpha Cav3.3) (Ca(v)3.3)
ruditapes_c27863	transmembrane calcium ion transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1I (Voltage-gated calcium channel subunit alpha Cav3.3) (Ca(v)3.3)
ruditapes_c27863	transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1I (Voltage-gated calcium channel subunit alpha Cav3.3) (Ca(v)3.3)
ruditapes_c27863	regulation of transmembrane ion transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1I (Voltage-gated calcium channel subunit alpha Cav3.3) (Ca(v)3.3)
ruditapes_c27863	transmembrane transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1I (Voltage-gated calcium channel subunit alpha Cav3.3) (Ca(v)3.3)
ruditapes_c27863	axon guidance	developmental processes	P	Voltage-dependent T-type calcium channel subunit alpha-1I (Voltage-gated calcium channel subunit alpha Cav3.3) (Ca(v)3.3)
ruditapes_c27863	axon guidance	cell organization and biogenesis	P	Voltage-dependent T-type calcium channel subunit alpha-1I (Voltage-gated calcium channel subunit alpha Cav3.3) (Ca(v)3.3)
ruditapes_c27863	ion transport	transport	P	Voltage-dependent T-type calcium channel subunit alpha-1I (Voltage-gated calcium channel subunit alpha Cav3.3) (Ca(v)3.3)
ruditapes_c3436	cell surface receptor linked signal transduction	signal transduction	P	C-type lectin domain family 1 member B (C-type lectin-like receptor 2) (CLEC-2)
ruditapes_c3436	defense response	stress response	P	C-type lectin domain family 1 member B (C-type lectin-like receptor 2) (CLEC-2)
ruditapes2_c852	cell adhesion	cell adhesion	P	Collagen alpha-1(XX) chain
ruditapes2_c1506	signal transduction	signal transduction	P	Teneurin-3 (Ten-3) (Protein Odd Oz/ten-m homolog 3) (Tenascin-M3) (Ten-m3) (Teneurin transmembrane protein 3)
ruditapes_c3913	signal transduction	signal transduction	P	Teneurin-3 (Ten-3) (Protein Odd Oz/ten-m homolog 3) (Tenascin-M3) (Ten-m3) (Teneurin transmembrane protein 3)
ruditapes_c28848	proteolysis	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.4.19.12) (Deubiquitinating enzyme 36) (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36)
ruditapes_c28848	ubiquitin-dependent protein catabolic process	protein metabolism	P	Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.4.19.12) (Deubiquitinating enzyme 36) (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36)
ruditapes2_c3795	regulation of protein amino acid phosphorylation	protein metabolism	P	Folliculin-interacting protein 2 (FNIP1-like protein) (O6-methylguanine-induced apoptosis 1 protein)
ruditapes2_c3795	"DNA damage response, signal transduction resulting in induction of apoptosis"	signal transduction	P	Folliculin-interacting protein 2 (FNIP1-like protein) (O6-methylguanine-induced apoptosis 1 protein)
ruditapes2_c3795	"DNA damage response, signal transduction resulting in induction of apoptosis"	stress response	P	Folliculin-interacting protein 2 (FNIP1-like protein) (O6-methylguanine-induced apoptosis 1 protein)
ruditapes2_c3795	"DNA damage response, signal transduction resulting in induction of apoptosis"	death	P	Folliculin-interacting protein 2 (FNIP1-like protein) (O6-methylguanine-induced apoptosis 1 protein)
ruditapes2_c3795	protein amino acid phosphorylation	protein metabolism	P	Folliculin-interacting protein 2 (FNIP1-like protein) (O6-methylguanine-induced apoptosis 1 protein)
ruditapes2_c3795	response to DNA damage stimulus	stress response	P	Folliculin-interacting protein 2 (FNIP1-like protein) (O6-methylguanine-induced apoptosis 1 protein)
ruditapes_c21801	ciliary or flagellar motility	other biological processes	P	"Dynein heavy chain 1, axonemal (Axonemal beta dynein heavy chain 1) (Ciliary dynein heavy chain 1) (Heat shock regulated protein 1) (HSRF-1) (hDHC7)"
ruditapes_c21801	ATP catabolic process	other metabolic processes	P	"Dynein heavy chain 1, axonemal (Axonemal beta dynein heavy chain 1) (Ciliary dynein heavy chain 1) (Heat shock regulated protein 1) (HSRF-1) (hDHC7)"
ruditapes_c21801	response to mechanical stimulus	other biological processes	P	"Dynein heavy chain 1, axonemal (Axonemal beta dynein heavy chain 1) (Ciliary dynein heavy chain 1) (Heat shock regulated protein 1) (HSRF-1) (hDHC7)"
ruditapes_c21801	microtubule-based movement	other biological processes	P	"Dynein heavy chain 1, axonemal (Axonemal beta dynein heavy chain 1) (Ciliary dynein heavy chain 1) (Heat shock regulated protein 1) (HSRF-1) (hDHC7)"
ruditapes2_c2069	cell cycle	cell cycle and proliferation	P	Kelch-like protein 13 (BTB and kelch domain-containing protein 2)
ruditapes2_c2069	cytokinesis	other biological processes	P	Kelch-like protein 13 (BTB and kelch domain-containing protein 2)
ruditapes2_c2069	cell division	other biological processes	P	Kelch-like protein 13 (BTB and kelch domain-containing protein 2)
ruditapes2_c2069	mitosis	cell cycle and proliferation	P	Kelch-like protein 13 (BTB and kelch domain-containing protein 2)
ruditapes2_c2069	mitosis	cell organization and biogenesis	P	Kelch-like protein 13 (BTB and kelch domain-containing protein 2)
ruditapes2_c2069	protein ubiquitination	protein metabolism	P	Kelch-like protein 13 (BTB and kelch domain-containing protein 2)
ruditapes_s37379	spindle assembly	cell cycle and proliferation	P	StAR-related lipid transfer protein 9 (START domain-containing protein 9) (StARD9)
ruditapes_s37379	spindle assembly	cell organization and biogenesis	P	StAR-related lipid transfer protein 9 (START domain-containing protein 9) (StARD9)
ruditapes_s37379	microtubule-based movement	other biological processes	P	StAR-related lipid transfer protein 9 (START domain-containing protein 9) (StARD9)
ruditapes_s37379	metabolic process	other metabolic processes	P	StAR-related lipid transfer protein 9 (START domain-containing protein 9) (StARD9)
ruditapes_c6398	biological_process	other biological processes	P	"Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1 (Leucine-rich repeat-containing protein 21) (Photoreceptor-associated LRR superfamily protein) (Retina-specific protein PAL)"
ruditapes_c25809	"transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulatory protein pro-1
ruditapes_c25809	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcriptional regulatory protein pro-1
ruditapes_c24166	poly(A)+ mRNA export from nucleus	transport	P	Uncharacterized RNA-binding protein C328.05
ruditapes2_c636	homologous chromosome segregation	cell cycle and proliferation	P	Dynein intermediate light chain dil1
ruditapes2_c636	cellular response to stress	stress response	P	Dynein intermediate light chain dil1
ruditapes2_c636	reciprocal meiotic recombination	cell cycle and proliferation	P	Dynein intermediate light chain dil1
ruditapes2_c636	reciprocal meiotic recombination	DNA metabolism	P	Dynein intermediate light chain dil1
ruditapes2_c636	horsetail nuclear movement	cell cycle and proliferation	P	Dynein intermediate light chain dil1
ruditapes2_c636	horsetail nuclear movement	transport	P	Dynein intermediate light chain dil1
ruditapes2_c356	protein peptidyl-prolyl isomerization	protein metabolism	P	41 kDa peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin-41) (CyP41) (Rotamase)
ruditapes2_c356	protein folding	protein metabolism	P	41 kDa peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) (Cyclophilin-41) (CyP41) (Rotamase)
ruditapes_c4135	cell wall macromolecule catabolic process	other metabolic processes	P	Intracellular hyphae protein 1
ruditapes_c31408	rRNA export from nucleus	transport	P	40S ribosomal protein S0-B
ruditapes_c31408	ribosomal small subunit biogenesis	other biological processes	P	40S ribosomal protein S0-B
ruditapes_c31408	rRNA processing	RNA metabolism	P	40S ribosomal protein S0-B
ruditapes_c31408	ribosomal small subunit assembly	cell organization and biogenesis	P	40S ribosomal protein S0-B
ruditapes_c31408	"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	40S ribosomal protein S0-B
ruditapes_c31408	ribosome biogenesis	other biological processes	P	40S ribosomal protein S0-B
ruditapes_c31408	"endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"	RNA metabolism	P	40S ribosomal protein S0-B
ruditapes_c31408	translation	protein metabolism	P	40S ribosomal protein S0-B
ruditapes_c21310	biological_process	other biological processes	P	UPF0662 protein C30C2.08
ruditapes_c21945	inner mitochondrial membrane organization	cell organization and biogenesis	P	"Sensitive to high expression protein 9 homolog, mitochondrial"
ruditapes_c27105	sphingolipid biosynthetic process	other metabolic processes	P	Dihydrosphingosine 1-phosphate phosphatase C823.11 (EC 3.1.3.-)
ruditapes_c27105	sphingolipid metabolic process	other metabolic processes	P	Dihydrosphingosine 1-phosphate phosphatase C823.11 (EC 3.1.3.-)
ruditapes_c27105	lipid metabolic process	other metabolic processes	P	Dihydrosphingosine 1-phosphate phosphatase C823.11 (EC 3.1.3.-)
ruditapes_c27403	positive regulation of ATPase activity	other biological processes	P	Uncharacterized protein C1711.08
ruditapes_c27403	response to stress	stress response	P	Uncharacterized protein C1711.08
ruditapes_c27403	cellular response to stress	stress response	P	Uncharacterized protein C1711.08
ruditapes_c27403	protein folding	protein metabolism	P	Uncharacterized protein C1711.08
ruditapes_c24121	chromatin silencing at centromere	RNA metabolism	P	Chromatin remodeling factor mit1 (EC 3.6.4.-) (Mi2-like interacting with clr3 protein 1) (Snf2/Hdac-containing repressor complex protein mit1) (SHREC protein mit1)
ruditapes_c24121	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Chromatin remodeling factor mit1 (EC 3.6.4.-) (Mi2-like interacting with clr3 protein 1) (Snf2/Hdac-containing repressor complex protein mit1) (SHREC protein mit1)
ruditapes_c24121	chromatin remodeling	cell organization and biogenesis	P	Chromatin remodeling factor mit1 (EC 3.6.4.-) (Mi2-like interacting with clr3 protein 1) (Snf2/Hdac-containing repressor complex protein mit1) (SHREC protein mit1)
ruditapes_c24121	nucleosome positioning	cell organization and biogenesis	P	Chromatin remodeling factor mit1 (EC 3.6.4.-) (Mi2-like interacting with clr3 protein 1) (Snf2/Hdac-containing repressor complex protein mit1) (SHREC protein mit1)
ruditapes_c24121	chromatin silencing at silent mating-type cassette	RNA metabolism	P	Chromatin remodeling factor mit1 (EC 3.6.4.-) (Mi2-like interacting with clr3 protein 1) (Snf2/Hdac-containing repressor complex protein mit1) (SHREC protein mit1)
ruditapes_c24121	chromatin silencing	RNA metabolism	P	Chromatin remodeling factor mit1 (EC 3.6.4.-) (Mi2-like interacting with clr3 protein 1) (Snf2/Hdac-containing repressor complex protein mit1) (SHREC protein mit1)
ruditapes_c24121	chromatin silencing at rDNA	RNA metabolism	P	Chromatin remodeling factor mit1 (EC 3.6.4.-) (Mi2-like interacting with clr3 protein 1) (Snf2/Hdac-containing repressor complex protein mit1) (SHREC protein mit1)
ruditapes_c24121	ATP catabolic process	other metabolic processes	P	Chromatin remodeling factor mit1 (EC 3.6.4.-) (Mi2-like interacting with clr3 protein 1) (Snf2/Hdac-containing repressor complex protein mit1) (SHREC protein mit1)
ruditapes_c18277	snoRNA catabolic process	RNA metabolism	P	Protein air1
ruditapes_c18277	rRNA catabolic process	RNA metabolism	P	Protein air1
ruditapes_c18277	ncRNA polyadenylation during polyadenylation-dependent ncRNA catabolic process	RNA metabolism	P	Protein air1
ruditapes_c18277	tRNA catabolic process	RNA metabolism	P	Protein air1
ruditapes_c18277	snRNA catabolic process	RNA metabolism	P	Protein air1
ruditapes_c6298	biological_process	other biological processes	P	Uncharacterized protein P35G2.04c
ruditapes_c23090	regulation of histone H3-K9 methylation	protein metabolism	P	Argonaute-binding protein 1
ruditapes_c23090	regulation of histone H3-K9 methylation	cell organization and biogenesis	P	Argonaute-binding protein 1
ruditapes_c23090	chromatin silencing at centromere	RNA metabolism	P	Argonaute-binding protein 1
ruditapes_c23090	sphingolipid biosynthetic process	other metabolic processes	P	Argonaute-binding protein 1
ruditapes_c23090	gene silencing by RNA	other metabolic processes	P	Argonaute-binding protein 1
ruditapes_c23090	"RNA interference, conversion of ds siRNA to ss siRNA"	RNA metabolism	P	Argonaute-binding protein 1
ruditapes_c14653	"nuclear mRNA cis splicing, via spliceosome"	RNA metabolism	P	Pre-mRNA-splicing factor cwf16 (Complexed with cdc5 protein 16)
ruditapes_c14653	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor cwf16 (Complexed with cdc5 protein 16)
ruditapes_c14653	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor cwf16 (Complexed with cdc5 protein 16)
ruditapes_lrc18792	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor cwf23 (Complexed with cdc5 protein 23)
ruditapes_lrc18792	"nuclear mRNA cis splicing, via spliceosome"	RNA metabolism	P	Pre-mRNA-splicing factor cwf23 (Complexed with cdc5 protein 23)
ruditapes_lrc18792	protein folding	protein metabolism	P	Pre-mRNA-splicing factor cwf23 (Complexed with cdc5 protein 23)
ruditapes_lrc18792	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor cwf23 (Complexed with cdc5 protein 23)
ruditapes2_c2532	proteolysis	protein metabolism	P	Putative dipeptidyl aminopeptidase C14C4.15c (EC 3.4.14.-)
ruditapes2_c2769	biological_process	other biological processes	P	Uncharacterized protein C1142.09
ruditapes2_c6142	oxidation reduction	other metabolic processes	P	Putative aldehyde dehydrogenase-like protein C21C3 (EC 1.2.1.-)
ruditapes2_c6142	metabolic process	other metabolic processes	P	Putative aldehyde dehydrogenase-like protein C21C3 (EC 1.2.1.-)
ruditapes_c8674	methylation	other metabolic processes	P	Uncharacterized methyltransferase-like protein SPBC21C3.07c (EC 2.1.1.-)
ruditapes_c8674	tRNA methylation	RNA metabolism	P	Uncharacterized methyltransferase-like protein SPBC21C3.07c (EC 2.1.1.-)
ruditapes_c15532	phosphorylation	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c15532	oxidation reduction	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c15532	cellular amino acid biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c15532	aromatic amino acid family biosynthetic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c15532	metabolic process	other metabolic processes	P	Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
ruditapes_c15368	double-strand break repair via homologous recombination	stress response	P	Translin-1 (Meiotically up-regulated gene 90 protein) (Translin homolog)
ruditapes_c15368	double-strand break repair via homologous recombination	DNA metabolism	P	Translin-1 (Meiotically up-regulated gene 90 protein) (Translin homolog)
ruditapes_c15368	DNA metabolic process	DNA metabolism	P	Translin-1 (Meiotically up-regulated gene 90 protein) (Translin homolog)
ruditapes_c15368	double-strand break repair via nonhomologous end joining	stress response	P	Translin-1 (Meiotically up-regulated gene 90 protein) (Translin homolog)
ruditapes_c15368	double-strand break repair via nonhomologous end joining	DNA metabolism	P	Translin-1 (Meiotically up-regulated gene 90 protein) (Translin homolog)
ruditapes_c15368	meiosis	cell cycle and proliferation	P	Translin-1 (Meiotically up-regulated gene 90 protein) (Translin homolog)
ruditapes2_c1524	reciprocal meiotic recombination	cell cycle and proliferation	P	Putative MutL protein homolog 1 (DNA mismatch repair protein MLH1)
ruditapes2_c1524	reciprocal meiotic recombination	DNA metabolism	P	Putative MutL protein homolog 1 (DNA mismatch repair protein MLH1)
ruditapes2_c1524	DNA repair	stress response	P	Putative MutL protein homolog 1 (DNA mismatch repair protein MLH1)
ruditapes2_c1524	DNA repair	DNA metabolism	P	Putative MutL protein homolog 1 (DNA mismatch repair protein MLH1)
ruditapes2_c1524	response to DNA damage stimulus	stress response	P	Putative MutL protein homolog 1 (DNA mismatch repair protein MLH1)
ruditapes2_c1524	ATP catabolic process	other metabolic processes	P	Putative MutL protein homolog 1 (DNA mismatch repair protein MLH1)
ruditapes2_c1524	mismatch repair	stress response	P	Putative MutL protein homolog 1 (DNA mismatch repair protein MLH1)
ruditapes2_c1524	mismatch repair	DNA metabolism	P	Putative MutL protein homolog 1 (DNA mismatch repair protein MLH1)
ruditapes_c18836	cell wall organization	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c18836	oxidation reduction	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c18836	regulation of cell shape	cell organization and biogenesis	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c18836	cell cycle	cell cycle and proliferation	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c18836	peptidoglycan biosynthetic process	other metabolic processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c18836	cell division	other biological processes	P	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase)
ruditapes_c12416	rRNA catabolic process	RNA metabolism	P	Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)
ruditapes_c12416	RNA processing	RNA metabolism	P	Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)
ruditapes2_lrc3778	riboflavin biosynthetic process	other metabolic processes	P	GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II)
ruditapes_c7410	transport	transport	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes_c7410	oxidation reduction	other metabolic processes	P	NADH-quinone oxidoreductase subunit D (EC 1.6.99.5) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
ruditapes2_c2592	phosphorylation	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes2_c2592	peptidoglycan turnover	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes2_c2592	amino sugar metabolic process	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes2_c2592	carbohydrate metabolic process	other metabolic processes	P	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)
ruditapes_c18011	translation	protein metabolism	P	50S ribosomal protein L19
ruditapes_c4599	metabolic process	other metabolic processes	P	Glycogen phosphorylase (EC 2.4.1.1)
ruditapes_c4599	glycogen metabolic process	other metabolic processes	P	Glycogen phosphorylase (EC 2.4.1.1)
ruditapes_c4599	carbohydrate metabolic process	other metabolic processes	P	Glycogen phosphorylase (EC 2.4.1.1)
ruditapes_c24087	tRNA processing	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c24087	queuosine biosynthetic process	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes_c24087	tRNA modification	RNA metabolism	P	Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)
ruditapes2_c2230	translation	protein metabolism	P	30S ribosomal protein S9
ruditapes_c4146	menaquinone biosynthetic process	other metabolic processes	P	Uncharacterized protein TC
ruditapes_c4146	ubiquinone biosynthetic process	other metabolic processes	P	Uncharacterized protein TC
ruditapes2_c2621	mismatch repair	stress response	P	DNA mismatch repair protein MutS
ruditapes2_c2621	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes2_c2621	DNA repair	stress response	P	DNA mismatch repair protein MutS
ruditapes2_c2621	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutS
ruditapes2_c2621	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutS
ruditapes_c2462	lipoprotein biosynthetic process	other metabolic processes	P	Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC 2.3.1.-)
ruditapes_c2462	nitrogen compound metabolic process	other metabolic processes	P	Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC 2.3.1.-)
ruditapes_c12831	leucyl-tRNA aminoacylation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c12831	leucyl-tRNA aminoacylation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c12831	tRNA aminoacylation for protein translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c12831	tRNA aminoacylation for protein translation	RNA metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c12831	translation	protein metabolism	P	Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)
ruditapes_c23094	translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c23094	tRNA aminoacylation for protein translation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c23094	tRNA aminoacylation for protein translation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c23094	histidyl-tRNA aminoacylation	protein metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c23094	histidyl-tRNA aminoacylation	RNA metabolism	P	Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)
ruditapes_c23955	translation	protein metabolism	P	50S ribosomal protein L4
ruditapes_c22397	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c22397	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes_c22397	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA
ruditapes2_c2477	immune response	other biological processes	P	Beta-2-microglobulin
ruditapes2_c2477	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Beta-2-microglobulin
ruditapes2_c1443	dephosphorylation	other metabolic processes	P	CTD small phosphatase-like protein (CTDSP-like) (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 1) (NLI-interacting factor 1) (Small C-terminal domain phosphatase 3)
ruditapes2_c1800	proteolysis	protein metabolism	P	Proteasome subunit alpha type-7 (EC 3.4.25.1) (Proteasome subunit alpha 4)
ruditapes2_c1800	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-7 (EC 3.4.25.1) (Proteasome subunit alpha 4)
ruditapes2_c1800	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-7 (EC 3.4.25.1) (Proteasome subunit alpha 4)
ruditapes_c11397	G-protein coupled receptor protein signaling pathway	signal transduction	P	Lysophosphatidic acid receptor 1-A (LPA receptor 1-A) (LPA-1-A) (Lysophosphatidic acid receptor LPA1 homolog 1) (xLPA1-1)
ruditapes_c11397	signal transduction	signal transduction	P	Lysophosphatidic acid receptor 1-A (LPA receptor 1-A) (LPA-1-A) (Lysophosphatidic acid receptor LPA1 homolog 1) (xLPA1-1)
ruditapes_lrc28704	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Ventral anterior homeobox 2a (Xvax2)
ruditapes_lrc28704	"transcription, DNA-dependent"	RNA metabolism	P	Ventral anterior homeobox 2a (Xvax2)
ruditapes_lrc28704	multicellular organismal development	developmental processes	P	Ventral anterior homeobox 2a (Xvax2)
ruditapes_c16078	cytoskeleton organization	cell organization and biogenesis	P	Protein piccolo (Aczonin) (Fragment)
ruditapes_c11052	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase pim-3 (EC 2.7.11.1) (qpim)
ruditapes_c11052	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase pim-3 (EC 2.7.11.1) (qpim)
ruditapes_c20886	cilium assembly	cell organization and biogenesis	P	Pericentriolar material 1 protein (PCM-1) (xPCM-1)
ruditapes_c20886	cell projection organization	cell organization and biogenesis	P	Pericentriolar material 1 protein (PCM-1) (xPCM-1)
ruditapes_c13253	multicellular organismal development	developmental processes	P	Homeobox protein Hox-A9
ruditapes_c13253	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein Hox-A9
ruditapes_c13253	"transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein Hox-A9
ruditapes2_c1869	multicellular organismal development	developmental processes	P	Frizzled-10 (Fz-10) (cFz-10)
ruditapes2_c1869	G-protein coupled receptor protein signaling pathway	signal transduction	P	Frizzled-10 (Fz-10) (cFz-10)
ruditapes2_c1869	Wnt receptor signaling pathway	signal transduction	P	Frizzled-10 (Fz-10) (cFz-10)
ruditapes2_c1869	signal transduction	signal transduction	P	Frizzled-10 (Fz-10) (cFz-10)
ruditapes2_c1869	brain development	developmental processes	P	Frizzled-10 (Fz-10) (cFz-10)
ruditapes2_c1869	Wnt receptor signaling pathway through beta-catenin	signal transduction	P	Frizzled-10 (Fz-10) (cFz-10)
ruditapes2_c1869	gonad development	developmental processes	P	Frizzled-10 (Fz-10) (cFz-10)
ruditapes2_c1869	vasculature development	developmental processes	P	Frizzled-10 (Fz-10) (cFz-10)
ruditapes2_c1869	embryonic development	developmental processes	P	Frizzled-10 (Fz-10) (cFz-10)
ruditapes2_c1869	cell surface receptor linked signal transduction	signal transduction	P	Frizzled-10 (Fz-10) (cFz-10)
ruditapes_c27430	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Early transcription factor 82 kDa subunit (ETF large subunit)
ruditapes_c27430	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Early transcription factor 82 kDa subunit (ETF large subunit)
ruditapes_c27430	"transcription, DNA-dependent"	RNA metabolism	P	Early transcription factor 82 kDa subunit (ETF large subunit)
ruditapes_c30075	"transcription, DNA-dependent"	RNA metabolism	P	RNA helicase NPH-II (EC 3.6.4.13) (Nucleoside triphosphatase II) (NTPase II) (Nucleoside triphosphate phosphohydrolase II) (NPH II) (RNA helicase m44R)
ruditapes_c20741	"transcription, DNA-dependent"	RNA metabolism	P	Poly(A) polymerase catalytic subunit (EC 2.7.7.19) (Poly(A) polymerase large subunit) (PAP-L)
ruditapes_c20741	mRNA processing	RNA metabolism	P	Poly(A) polymerase catalytic subunit (EC 2.7.7.19) (Poly(A) polymerase large subunit) (PAP-L)
ruditapes_s38662	"transcription, DNA-dependent"	RNA metabolism	P	Early transcription factor 82 kDa subunit (ETF large subunit)
ruditapes_s38662	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Early transcription factor 82 kDa subunit (ETF large subunit)
ruditapes_s38662	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Early transcription factor 82 kDa subunit (ETF large subunit)
ruditapes2_c2120	evasion by virus of host immune response	stress response	P	Non-structural protein 1 (NSP1) (NCVP2) (Non-structural RNA-binding protein 53) (NS53)
ruditapes2_c2120	interspecies interaction between organisms	other biological processes	P	Non-structural protein 1 (NSP1) (NCVP2) (Non-structural RNA-binding protein 53) (NS53)
ruditapes_s34242	DNA replication	DNA metabolism	P	DNA polymerase 037L (EC 2.7.7.7)
ruditapes_s34242	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase 037L (EC 2.7.7.7)
ruditapes_lrc38363	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase 037L (EC 2.7.7.7)
ruditapes_lrc38363	DNA replication	DNA metabolism	P	DNA polymerase 037L (EC 2.7.7.7)
ruditapes_c13141	transport	transport	P	Protein Vpu (U ORF protein) (Viral protein U)
ruditapes_c13141	release of virus from host	other biological processes	P	Protein Vpu (U ORF protein) (Viral protein U)
ruditapes_c13141	interspecies interaction between organisms	other biological processes	P	Protein Vpu (U ORF protein) (Viral protein U)
ruditapes_c13141	ion transport	transport	P	Protein Vpu (U ORF protein) (Viral protein U)
ruditapes_c13141	apoptosis	death	P	Protein Vpu (U ORF protein) (Viral protein U)
ruditapes_c13141	evasion by virus of host immune response	stress response	P	Protein Vpu (U ORF protein) (Viral protein U)
ruditapes_c1060	regulation of small GTPase mediated signal transduction	signal transduction	P	RAS guanyl-releasing protein 2 (Calcium and DAG-regulated guanine nucleotide exchange factor I) (CalDAG-GEFI) (F25B3.3 kinase-like protein)
ruditapes_c1060	small GTPase mediated signal transduction	signal transduction	P	RAS guanyl-releasing protein 2 (Calcium and DAG-regulated guanine nucleotide exchange factor I) (CalDAG-GEFI) (F25B3.3 kinase-like protein)
ruditapes_c15472	cell redox homeostasis	other biological processes	P	Glutaredoxin-1 (Thioltransferase-1) (TTase-1)
ruditapes_c15472	transport	transport	P	Glutaredoxin-1 (Thioltransferase-1) (TTase-1)
ruditapes_c15472	electron transport chain	other metabolic processes	P	Glutaredoxin-1 (Thioltransferase-1) (TTase-1)
ruditapes_c6978	response to nutrient	other biological processes	P	Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 4) (LACS 4) (mACS4)
ruditapes_c6978	embryonic process involved in female pregnancy	developmental processes	P	Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 4) (LACS 4) (mACS4)
ruditapes_c6978	fatty acid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 4) (LACS 4) (mACS4)
ruditapes_c6978	regulation of fatty acid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 4) (LACS 4) (mACS4)
ruditapes_c6978	metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 4) (LACS 4) (mACS4)
ruditapes_c6978	response to interleukin-15	other biological processes	P	Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 4) (LACS 4) (mACS4)
ruditapes_c6978	lipid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 4) (LACS 4) (mACS4)
ruditapes_c16865	negative regulation of ERK1 and ERK2 cascade	signal transduction	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase Pin1) (PPIase Pin1)
ruditapes_c16865	cell cycle	cell cycle and proliferation	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase Pin1) (PPIase Pin1)
ruditapes_c16865	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase Pin1) (PPIase Pin1)
ruditapes_c16865	regulation of pathway-restricted SMAD protein phosphorylation	signal transduction	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase Pin1) (PPIase Pin1)
ruditapes_c16865	regulation of pathway-restricted SMAD protein phosphorylation	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase Pin1) (PPIase Pin1)
ruditapes_c16865	regulation of cell proliferation	cell cycle and proliferation	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase Pin1) (PPIase Pin1)
ruditapes_c16865	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase Pin1) (PPIase Pin1)
ruditapes_c16865	negative regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase Pin1) (PPIase Pin1)
ruditapes_c16865	positive regulation of Rho GTPase activity	signal transduction	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase Pin1) (PPIase Pin1)
ruditapes_c16865	positive regulation of ubiquitin-protein ligase activity	other biological processes	P	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase Pin1) (PPIase Pin1)
ruditapes_c17005	lipid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_c17005	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_c17005	steroid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_c17005	thyroid hormone metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_s37894	lipid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_c17005	sulfation	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_c17005	flavonoid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_s37894	phenol metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_c17005	phenol metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_s37894	flavonoid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_s37894	steroid metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_s37894	sulfation	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_s37894	thyroid hormone metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_s37894	xenobiotic metabolic process	other metabolic processes	P	Sulfotransferase family cytosolic 1B member 1 (ST1B1) (Sulfotransferase 1B1) (EC 2.8.2.-) (DOPA/tyrosine sulfotransferase)
ruditapes_c22142	mRNA processing	RNA metabolism	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c22142	cell cycle	cell cycle and proliferation	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c22142	cytokinesis	other biological processes	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c22142	spindle pole body separation	cell organization and biogenesis	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c22142	RNA splicing	RNA metabolism	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c22142	"transcription, DNA-dependent"	RNA metabolism	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c22142	microtubule cytoskeleton organization	cell organization and biogenesis	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c22142	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c22142	spindle pole body separation	cell cycle and proliferation	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c22142	regulation of cell cycle	cell cycle and proliferation	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c22142	anti-apoptosis	death	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c22142	regulation of RNA splicing	RNA metabolism	P	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)
ruditapes_c27805	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Sal-like protein 2 (Spalt-like protein 2) (Zinc finger protein Spalt-2) (Sal-2) (mSal-2)
ruditapes_c27805	"transcription, DNA-dependent"	RNA metabolism	P	Sal-like protein 2 (Spalt-like protein 2) (Zinc finger protein Spalt-2) (Sal-2) (mSal-2)
ruditapes_c27805	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Sal-like protein 2 (Spalt-like protein 2) (Zinc finger protein Spalt-2) (Sal-2) (mSal-2)
ruditapes_c27805	neural tube development	developmental processes	P	Sal-like protein 2 (Spalt-like protein 2) (Zinc finger protein Spalt-2) (Sal-2) (mSal-2)
ruditapes_c27805	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Sal-like protein 2 (Spalt-like protein 2) (Zinc finger protein Spalt-2) (Sal-2) (mSal-2)
ruditapes_c4009	fat cell differentiation	other biological processes	P	F-box-like/WD repeat-containing protein TBL1X (Transducin beta-like protein 1X)
ruditapes_c4009	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	F-box-like/WD repeat-containing protein TBL1X (Transducin beta-like protein 1X)
ruditapes_c4009	response to steroid hormone stimulus	other biological processes	P	F-box-like/WD repeat-containing protein TBL1X (Transducin beta-like protein 1X)
ruditapes_c4009	proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	F-box-like/WD repeat-containing protein TBL1X (Transducin beta-like protein 1X)
ruditapes_c4009	response to estrogen stimulus	other biological processes	P	F-box-like/WD repeat-containing protein TBL1X (Transducin beta-like protein 1X)
ruditapes_c4009	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	F-box-like/WD repeat-containing protein TBL1X (Transducin beta-like protein 1X)
ruditapes_c4009	"regulation of transcription, DNA-dependent"	RNA metabolism	P	F-box-like/WD repeat-containing protein TBL1X (Transducin beta-like protein 1X)
ruditapes_c4009	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	F-box-like/WD repeat-containing protein TBL1X (Transducin beta-like protein 1X)
ruditapes_c4009	"transcription, DNA-dependent"	RNA metabolism	P	F-box-like/WD repeat-containing protein TBL1X (Transducin beta-like protein 1X)
ruditapes_c11640	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase 7 (NDK 7) (NDP kinase 7) (EC 2.7.4.6) (nm23-R7)
ruditapes_c11640	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase 7 (NDK 7) (NDP kinase 7) (EC 2.7.4.6) (nm23-R7)
ruditapes_c11640	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase 7 (NDK 7) (NDP kinase 7) (EC 2.7.4.6) (nm23-R7)
ruditapes_c11640	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase 7 (NDK 7) (NDP kinase 7) (EC 2.7.4.6) (nm23-R7)
ruditapes_c11640	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase 7 (NDK 7) (NDP kinase 7) (EC 2.7.4.6) (nm23-R7)
ruditapes_c11640	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase 7 (NDK 7) (NDP kinase 7) (EC 2.7.4.6) (nm23-R7)
ruditapes_c16311	oxidation reduction	other metabolic processes	P	Inositol oxygenase (EC 1.13.99.1) (Aldehyde reductase-like 6) (Myo-inositol oxygenase) (MI oxygenase) (Renal-specific oxidoreductase)
ruditapes_c16311	inositol catabolic process	other metabolic processes	P	Inositol oxygenase (EC 1.13.99.1) (Aldehyde reductase-like 6) (Myo-inositol oxygenase) (MI oxygenase) (Renal-specific oxidoreductase)
ruditapes2_c2191	inositol catabolic process	other metabolic processes	P	Inositol oxygenase (EC 1.13.99.1) (Aldehyde reductase-like 6) (Myo-inositol oxygenase) (MI oxygenase) (Renal-specific oxidoreductase)
ruditapes2_c2191	oxidation reduction	other metabolic processes	P	Inositol oxygenase (EC 1.13.99.1) (Aldehyde reductase-like 6) (Myo-inositol oxygenase) (MI oxygenase) (Renal-specific oxidoreductase)
ruditapes_lrc26717	substrate adhesion-dependent cell spreading	cell adhesion	P	SRC kinase signaling inhibitor 1 (SNAP-25-interacting protein) (SNIP) (p130Cas-associated protein) (p140Cap)
ruditapes_lrc26717	substrate adhesion-dependent cell spreading	cell organization and biogenesis	P	SRC kinase signaling inhibitor 1 (SNAP-25-interacting protein) (SNIP) (p130Cas-associated protein) (p140Cap)
ruditapes_lrc26717	negative regulation of protein secretion	transport	P	SRC kinase signaling inhibitor 1 (SNAP-25-interacting protein) (SNIP) (p130Cas-associated protein) (p140Cap)
ruditapes_lrc26717	exocytosis	transport	P	SRC kinase signaling inhibitor 1 (SNAP-25-interacting protein) (SNIP) (p130Cas-associated protein) (p140Cap)
ruditapes_lrc26717	regulation of cell migration	other biological processes	P	SRC kinase signaling inhibitor 1 (SNAP-25-interacting protein) (SNIP) (p130Cas-associated protein) (p140Cap)
ruditapes_c10533	cell motion	other biological processes	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	Golgi to plasma membrane protein transport	transport	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	regulation of microtubule-based process	other biological processes	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	posttranslational protein targeting to membrane	transport	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	regulation of focal adhesion formation	cell adhesion	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	regulation of focal adhesion formation	cell organization and biogenesis	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	cell cycle arrest	cell cycle and proliferation	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	Wnt receptor signaling pathway	signal transduction	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	establishment or maintenance of cell polarity	cell organization and biogenesis	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	positive regulation of Wnt receptor signaling pathway	signal transduction	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	ATP catabolic process	other metabolic processes	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	mesoderm formation	developmental processes	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	regulation of epithelial cell migration	other biological processes	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c10533	wound healing	stress response	P	Microtubule-actin cross-linking factor 1 (Actin cross-linking family 7)
ruditapes_c5069	cell-cell signaling	cell-cell signaling	P	Fibroblast growth factor-binding protein 1 (FGF-BP) (FGF-BP1) (FGF-binding protein 1) (FGFBP-1) (Growth factor-binding protein 1)
ruditapes_c5069	positive regulation of fibroblast growth factor receptor signaling pathway	signal transduction	P	Fibroblast growth factor-binding protein 1 (FGF-BP) (FGF-BP1) (FGF-binding protein 1) (FGFBP-1) (Growth factor-binding protein 1)
ruditapes_c5069	positive regulation of cell proliferation	cell cycle and proliferation	P	Fibroblast growth factor-binding protein 1 (FGF-BP) (FGF-BP1) (FGF-binding protein 1) (FGFBP-1) (Growth factor-binding protein 1)
ruditapes_c479	signal transduction	signal transduction	P	Probable G-protein coupled receptor 37
ruditapes_s40282	signal transduction	signal transduction	P	Probable G-protein coupled receptor 37
ruditapes_s40282	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 37
ruditapes_c479	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor 37
ruditapes_c20457	integrin-mediated signaling pathway	signal transduction	P	Integrin alpha-D (CD antigen CD11d)
ruditapes_c20457	cell adhesion	cell adhesion	P	Integrin alpha-D (CD antigen CD11d)
ruditapes_c20457	activated T cell proliferation	cell cycle and proliferation	P	Integrin alpha-D (CD antigen CD11d)
ruditapes_c10894	metabolic process	other metabolic processes	P	Retinol dehydrogenase 11 (EC 1.1.1.300) (Androgen-regulated short-chain dehydrogenase/reductase 1) (Cell line MC/9.IL4-derived protein 1) (M42C60) (Prostate short-chain dehydrogenase/reductase 1) (Retinal reductase 1) (RalR1) (Short-chain aldehyde dehydrogenase) (SCALD)
ruditapes_c10894	oxidation reduction	other metabolic processes	P	Retinol dehydrogenase 11 (EC 1.1.1.300) (Androgen-regulated short-chain dehydrogenase/reductase 1) (Cell line MC/9.IL4-derived protein 1) (M42C60) (Prostate short-chain dehydrogenase/reductase 1) (Retinal reductase 1) (RalR1) (Short-chain aldehyde dehydrogenase) (SCALD)
ruditapes_c10894	retinol metabolic process	other metabolic processes	P	Retinol dehydrogenase 11 (EC 1.1.1.300) (Androgen-regulated short-chain dehydrogenase/reductase 1) (Cell line MC/9.IL4-derived protein 1) (M42C60) (Prostate short-chain dehydrogenase/reductase 1) (Retinal reductase 1) (RalR1) (Short-chain aldehyde dehydrogenase) (SCALD)
ruditapes2_c929	detection of bacterium	other biological processes	P	Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)
ruditapes2_c929	metabolic process	other metabolic processes	P	Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)
ruditapes2_c929	positive regulation of DNA repair	stress response	P	Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)
ruditapes2_c929	positive regulation of DNA repair	DNA metabolism	P	Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)
ruditapes2_c929	carbohydrate metabolic process	other metabolic processes	P	Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)
ruditapes2_c929	response to DNA damage stimulus	stress response	P	Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)
ruditapes_c1906	odontogenesis of dentine-containing tooth	developmental processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	cell differentiation	other biological processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	synaptic growth at neuromuscular junction	developmental processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	synaptic growth at neuromuscular junction	cell organization and biogenesis	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	proximal/distal pattern formation	developmental processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	receptor clustering	other metabolic processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	receptor clustering	cell organization and biogenesis	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	multicellular organismal development	developmental processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	anatomical structure development	other biological processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	dorsal/ventral pattern formation	developmental processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	hair follicle development	developmental processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	embryonic digit morphogenesis	developmental processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	receptor clustering	signal transduction	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	Wnt receptor signaling pathway	signal transduction	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	embryonic limb morphogenesis	developmental processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	endocytosis	transport	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	endocytosis	cell organization and biogenesis	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	kidney development	developmental processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c1906	protein localization	other biological processes	P	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)
ruditapes_c16740	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein Wnt-16
ruditapes_c16740	axonogenesis	developmental processes	P	Protein Wnt-16
ruditapes_c16740	axonogenesis	cell organization and biogenesis	P	Protein Wnt-16
ruditapes_c16740	anterior/posterior pattern formation	developmental processes	P	Protein Wnt-16
ruditapes_c16740	positive regulation of phosphoinositide 3-kinase cascade	signal transduction	P	Protein Wnt-16
ruditapes_c16740	Wnt receptor signaling pathway	signal transduction	P	Protein Wnt-16
ruditapes_c16740	positive regulation of JNK cascade	signal transduction	P	Protein Wnt-16
ruditapes_c16740	positive regulation of JNK cascade	stress response	P	Protein Wnt-16
ruditapes_c16740	positive regulation of gene expression	other metabolic processes	P	Protein Wnt-16
ruditapes_c16740	multicellular organismal development	developmental processes	P	Protein Wnt-16
ruditapes_c16740	keratinocyte proliferation	cell cycle and proliferation	P	Protein Wnt-16
ruditapes_c16740	cardiac epithelial to mesenchymal transition	developmental processes	P	Protein Wnt-16
ruditapes_c16740	cardiac epithelial to mesenchymal transition	cell organization and biogenesis	P	Protein Wnt-16
ruditapes_c16740	Wnt receptor signaling pathway through beta-catenin	signal transduction	P	Protein Wnt-16
ruditapes_c16740	axis specification	developmental processes	P	Protein Wnt-16
ruditapes_c16740	keratinocyte differentiation	other biological processes	P	Protein Wnt-16
ruditapes_c16740	negative regulation of cell death	death	P	Protein Wnt-16
ruditapes_c15844	mitochondrial DNA replication	DNA metabolism	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c15844	mitochondrial DNA replication	cell organization and biogenesis	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c15844	"base-excision repair, gap-filling"	stress response	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c15844	"base-excision repair, gap-filling"	DNA metabolism	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c15844	aging	other biological processes	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c15844	metabolic process	other metabolic processes	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c15844	DNA replication	DNA metabolism	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c15844	DNA-dependent DNA replication	DNA metabolism	P	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha)
ruditapes_c15135	protein amino acid phosphorylation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes2_c2968	endoplasmic reticulum unfolded protein response	signal transduction	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes2_c2968	endoplasmic reticulum unfolded protein response	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes2_c2968	phosphorylation	other metabolic processes	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes_c15135	regulation of translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes2_c2968	cellular response to starvation	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes2_c2968	protein amino acid phosphorylation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes_c15135	phosphorylation	other metabolic processes	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes_c15135	regulation of translational initiation in response to stress	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes_c15135	regulation of translational initiation in response to stress	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes2_c2968	regulation of translational initiation in response to stress	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes2_c2968	regulation of translational initiation in response to stress	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes2_c2968	regulation of translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes_c15135	negative regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes_c15135	endoplasmic reticulum unfolded protein response	signal transduction	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes_c15135	endoplasmic reticulum unfolded protein response	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes2_c2968	negative regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes_c15135	cellular response to starvation	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
ruditapes_c18496	somatic hypermutation of immunoglobulin genes	developmental processes	P	Exonuclease 1 (mExo1) (EC 3.1.-.-) (Exonuclease I)
ruditapes_c18496	DNA recombination	DNA metabolism	P	Exonuclease 1 (mExo1) (EC 3.1.-.-) (Exonuclease I)
ruditapes_c18496	mismatch repair	stress response	P	Exonuclease 1 (mExo1) (EC 3.1.-.-) (Exonuclease I)
ruditapes_c18496	mismatch repair	DNA metabolism	P	Exonuclease 1 (mExo1) (EC 3.1.-.-) (Exonuclease I)
ruditapes_c18496	meiosis	cell cycle and proliferation	P	Exonuclease 1 (mExo1) (EC 3.1.-.-) (Exonuclease I)
ruditapes_c18496	humoral immune response mediated by circulating immunoglobulin	other biological processes	P	Exonuclease 1 (mExo1) (EC 3.1.-.-) (Exonuclease I)
ruditapes_c18496	DNA repair	stress response	P	Exonuclease 1 (mExo1) (EC 3.1.-.-) (Exonuclease I)
ruditapes_c18496	DNA repair	DNA metabolism	P	Exonuclease 1 (mExo1) (EC 3.1.-.-) (Exonuclease I)
ruditapes_c18496	isotype switching	developmental processes	P	Exonuclease 1 (mExo1) (EC 3.1.-.-) (Exonuclease I)
ruditapes_c18496	isotype switching	DNA metabolism	P	Exonuclease 1 (mExo1) (EC 3.1.-.-) (Exonuclease I)
ruditapes_c18496	response to DNA damage stimulus	stress response	P	Exonuclease 1 (mExo1) (EC 3.1.-.-) (Exonuclease I)
ruditapes2_c1566	defense response to Gram-negative bacterium	stress response	P	Interferon-inducible GTPase 1 (EC 3.6.5.-)
ruditapes2_c1566	GTP catabolic process	other metabolic processes	P	Interferon-inducible GTPase 1 (EC 3.6.5.-)
ruditapes2_c1566	regulation of autophagy	other metabolic processes	P	Interferon-inducible GTPase 1 (EC 3.6.5.-)
ruditapes2_c1566	innate immune response	stress response	P	Interferon-inducible GTPase 1 (EC 3.6.5.-)
ruditapes2_c1566	cytokine-mediated signaling pathway	signal transduction	P	Interferon-inducible GTPase 1 (EC 3.6.5.-)
ruditapes2_c1566	defense response to protozoan	stress response	P	Interferon-inducible GTPase 1 (EC 3.6.5.-)
ruditapes_s39698	sphingolipid metabolic process	other metabolic processes	P	Serine incorporator 1 (Axotomy-induced glyco/Golgi protein 2) (Membrane protein TMS-2) (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_s39698	positive regulation of transferase activity	other biological processes	P	Serine incorporator 1 (Axotomy-induced glyco/Golgi protein 2) (Membrane protein TMS-2) (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_s39698	phosphatidylserine metabolic process	other metabolic processes	P	Serine incorporator 1 (Axotomy-induced glyco/Golgi protein 2) (Membrane protein TMS-2) (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_s39698	L-serine transport	transport	P	Serine incorporator 1 (Axotomy-induced glyco/Golgi protein 2) (Membrane protein TMS-2) (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_s39698	phospholipid biosynthetic process	other metabolic processes	P	Serine incorporator 1 (Axotomy-induced glyco/Golgi protein 2) (Membrane protein TMS-2) (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_s39698	lipid metabolic process	other metabolic processes	P	Serine incorporator 1 (Axotomy-induced glyco/Golgi protein 2) (Membrane protein TMS-2) (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2)
ruditapes_lrc13574	small GTPase mediated signal transduction	signal transduction	P	Breast cancer anti-estrogen resistance protein 3 (p130Cas-binding protein AND-34)
ruditapes_c8706	biological_process	other biological processes	P	F-box only protein 16
ruditapes_lrc33673	sensory perception of pain	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_lrc33673	response to amphetamine	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_lrc33673	signal transduction	signal transduction	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_lrc33673	response to lipopolysaccharide	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_lrc33673	negative regulation of inflammatory response	stress response	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_lrc33673	behavior	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_lrc33673	negative regulation of nitric-oxide synthase activity	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_lrc33673	G-protein coupled receptor protein signaling pathway	signal transduction	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_lrc33673	negative regulation of mast cell activation	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_lrc33673	negative regulation of action potential	other biological processes	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_lrc33673	inflammatory response	stress response	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_lrc33673	"negative regulation of synaptic transmission, GABAergic"	cell-cell signaling	P	Cannabinoid receptor 2 (CB-2) (CB2) (rCB2)
ruditapes_c26527	cellular response to nutrient	other biological processes	P	PR domain zinc finger protein 4 (PR domain-containing protein 4)
ruditapes_c26527	"regulation of transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 4 (PR domain-containing protein 4)
ruditapes_c23307	"regulation of transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 4 (PR domain-containing protein 4)
ruditapes_c26527	"transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 4 (PR domain-containing protein 4)
ruditapes_c23307	negative regulation of cell growth	other biological processes	P	PR domain zinc finger protein 4 (PR domain-containing protein 4)
ruditapes_c23307	"transcription, DNA-dependent"	RNA metabolism	P	PR domain zinc finger protein 4 (PR domain-containing protein 4)
ruditapes_c26527	negative regulation of cell growth	other biological processes	P	PR domain zinc finger protein 4 (PR domain-containing protein 4)
ruditapes_c23307	cellular response to nutrient	other biological processes	P	PR domain zinc finger protein 4 (PR domain-containing protein 4)
ruditapes_c8528	regulation of cell growth	other biological processes	P	Protein NOV homolog (NovH) (CCN family member 3) (Nephroblastoma-overexpressed gene protein homolog)
ruditapes_c13353	trypsinogen activation	protein metabolism	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Estrogen-regulated protein 1) (Uterus/ovary-specific protein 44)
ruditapes_c13353	hormone-mediated signaling	signal transduction	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Estrogen-regulated protein 1) (Uterus/ovary-specific protein 44)
ruditapes_c13353	female pregnancy	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Estrogen-regulated protein 1) (Uterus/ovary-specific protein 44)
ruditapes2_c3692	hormone-mediated signaling	signal transduction	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Estrogen-regulated protein 1) (Uterus/ovary-specific protein 44)
ruditapes2_c3692	female pregnancy	other biological processes	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Estrogen-regulated protein 1) (Uterus/ovary-specific protein 44)
ruditapes2_c3692	trypsinogen activation	protein metabolism	P	CUB and zona pellucida-like domain-containing protein 1 (CUB and ZP domain-containing protein 1) (Estrogen-regulated protein 1) (Uterus/ovary-specific protein 44)
ruditapes_s37618	signal transduction	signal transduction	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_c15703	signal transduction	signal transduction	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_c14918	signal transduction	signal transduction	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_c7791	transmembrane transport	transport	P	Sodium channel protein type 11 subunit alpha (NaN) (Sensory neuron sodium channel 2) (Sodium channel protein type XI subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.9)
ruditapes_c7791	ion transport	transport	P	Sodium channel protein type 11 subunit alpha (NaN) (Sensory neuron sodium channel 2) (Sodium channel protein type XI subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.9)
ruditapes_c7791	regulation of transmembrane ion transport	transport	P	Sodium channel protein type 11 subunit alpha (NaN) (Sensory neuron sodium channel 2) (Sodium channel protein type XI subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.9)
ruditapes_c7791	sodium ion transport	transport	P	Sodium channel protein type 11 subunit alpha (NaN) (Sensory neuron sodium channel 2) (Sodium channel protein type XI subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.9)
ruditapes_c7791	transport	transport	P	Sodium channel protein type 11 subunit alpha (NaN) (Sensory neuron sodium channel 2) (Sodium channel protein type XI subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.9)
ruditapes2_c897	heterophilic cell adhesion	cell adhesion	P	Sialomucin core protein 24 (MUC-24) (Endolyn) (Multi-glycosylated core protein 24) (MGC-24) (MGC-24v) (CD antigen CD164)
ruditapes2_c897	cell adhesion	cell adhesion	P	Sialomucin core protein 24 (MUC-24) (Endolyn) (Multi-glycosylated core protein 24) (MGC-24) (MGC-24v) (CD antigen CD164)
ruditapes2_c897	muscle organ development	developmental processes	P	Sialomucin core protein 24 (MUC-24) (Endolyn) (Multi-glycosylated core protein 24) (MGC-24) (MGC-24v) (CD antigen CD164)
ruditapes_c18446	thiamin diphosphate biosynthetic process	other metabolic processes	P	Thiamin pyrophosphokinase 1 (mTPK1) (EC 2.7.6.2) (Thiamine pyrophosphokinase 1)
ruditapes_c18446	phosphorylation	other metabolic processes	P	Thiamin pyrophosphokinase 1 (mTPK1) (EC 2.7.6.2) (Thiamine pyrophosphokinase 1)
ruditapes_c18446	thiamin metabolic process	other metabolic processes	P	Thiamin pyrophosphokinase 1 (mTPK1) (EC 2.7.6.2) (Thiamine pyrophosphokinase 1)
ruditapes_c14249	biological_process	other biological processes	P	Actin-related protein 2/3 complex subunit 1A (SOP2-like protein) (Sid 329)
ruditapes_c14249	regulation of actin filament polymerization	protein metabolism	P	Actin-related protein 2/3 complex subunit 1A (SOP2-like protein) (Sid 329)
ruditapes_c14249	regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 1A (SOP2-like protein) (Sid 329)
ruditapes_c13762	cell cycle arrest	cell cycle and proliferation	P	Adenylate kinase isoenzyme 1 (AK 1) (EC 2.7.4.3) (ATP-AMP transphosphorylase 1) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase) (Myokinase)
ruditapes_c13762	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Adenylate kinase isoenzyme 1 (AK 1) (EC 2.7.4.3) (ATP-AMP transphosphorylase 1) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase) (Myokinase)
ruditapes_c13762	phosphorylation	other metabolic processes	P	Adenylate kinase isoenzyme 1 (AK 1) (EC 2.7.4.3) (ATP-AMP transphosphorylase 1) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase) (Myokinase)
ruditapes_c13762	ATP metabolic process	other metabolic processes	P	Adenylate kinase isoenzyme 1 (AK 1) (EC 2.7.4.3) (ATP-AMP transphosphorylase 1) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase) (Myokinase)
ruditapes_c9829	proteolysis	protein metabolism	P	Serine protease HTRA1 (EC 3.4.21.-) (High-temperature requirement A serine peptidase 1) (Serine protease 11)
ruditapes_c9829	regulation of cell growth	other biological processes	P	Serine protease HTRA1 (EC 3.4.21.-) (High-temperature requirement A serine peptidase 1) (Serine protease 11)
ruditapes_c9829	negative regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	Serine protease HTRA1 (EC 3.4.21.-) (High-temperature requirement A serine peptidase 1) (Serine protease 11)
ruditapes_c9829	negative regulation of BMP signaling pathway	signal transduction	P	Serine protease HTRA1 (EC 3.4.21.-) (High-temperature requirement A serine peptidase 1) (Serine protease 11)
ruditapes_c17112	signal transduction	signal transduction	P	5-hydroxytryptamine receptor 6 (5-HT-6) (5-HT6) (Serotonin receptor 6)
ruditapes_c17112	G-protein coupled receptor protein signaling pathway	signal transduction	P	5-hydroxytryptamine receptor 6 (5-HT-6) (5-HT6) (Serotonin receptor 6)
ruditapes_c17895	lipid catabolic process	other metabolic processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 (E-NPP 2) (EC 3.1.4.39) (Autotaxin) (Extracellular lysophospholipase D) (LysoPLD)
ruditapes_c17895	immune response	other biological processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 (E-NPP 2) (EC 3.1.4.39) (Autotaxin) (Extracellular lysophospholipase D) (LysoPLD)
ruditapes_c17895	phosphatidylcholine catabolic process	other metabolic processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 (E-NPP 2) (EC 3.1.4.39) (Autotaxin) (Extracellular lysophospholipase D) (LysoPLD)
ruditapes_c17895	chemotaxis	other biological processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 (E-NPP 2) (EC 3.1.4.39) (Autotaxin) (Extracellular lysophospholipase D) (LysoPLD)
ruditapes_c17895	metabolic process	other metabolic processes	P	Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 (E-NPP 2) (EC 3.1.4.39) (Autotaxin) (Extracellular lysophospholipase D) (LysoPLD)
ruditapes_s40089	central nervous system development	developmental processes	P	"Teneurin-2 (Ten-2) (Neurestin) (Protein Odd Oz/ten-m homolog 2) (Tenascin-M2) (Ten-m2) (Teneurin transmembrane protein 2) [Cleaved into: Ten-2, soluble form; Ten-2 intracellular domain (Ten-2 ICD)]"
ruditapes_s40089	signal transduction	signal transduction	P	"Teneurin-2 (Ten-2) (Neurestin) (Protein Odd Oz/ten-m homolog 2) (Tenascin-M2) (Ten-m2) (Teneurin transmembrane protein 2) [Cleaved into: Ten-2, soluble form; Ten-2 intracellular domain (Ten-2 ICD)]"
ruditapes2_c655	transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes_c10659	proton transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes_c10659	cell death	death	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes2_c655	aging	other biological processes	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes2_c655	proton transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes_c10659	transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes_c10659	aging	other biological processes	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes2_c655	ion transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes2_c655	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes2_c655	cell death	death	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes_c10659	ion transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes_c10659	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (Protein C7-1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)
ruditapes_c13800	transport	transport	P	Multidrug resistance-associated protein 6 (ATP-binding cassette sub-family C member 6)
ruditapes_c13800	ATP catabolic process	other metabolic processes	P	Multidrug resistance-associated protein 6 (ATP-binding cassette sub-family C member 6)
ruditapes_c13800	transmembrane transport	transport	P	Multidrug resistance-associated protein 6 (ATP-binding cassette sub-family C member 6)
ruditapes_c33617	myelination in the peripheral nervous system	developmental processes	P	Disintegrin and metalloproteinase domain-containing protein 22 (ADAM 22)
ruditapes_c33617	adult locomotory behavior	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 22 (ADAM 22)
ruditapes_c33617	proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 22 (ADAM 22)
ruditapes_c33617	Schwann cell differentiation	developmental processes	P	Disintegrin and metalloproteinase domain-containing protein 22 (ADAM 22)
ruditapes_c12596	positive regulation of smooth muscle cell proliferation	cell cycle and proliferation	P	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)
ruditapes_c12596	positive regulation of cell proliferation	cell cycle and proliferation	P	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)
ruditapes_c12596	negative regulation of inflammatory response	stress response	P	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)
ruditapes_c12596	G-protein coupled receptor protein signaling pathway	signal transduction	P	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)
ruditapes_c12596	activation of adenylate cyclase activity by G-protein signaling pathway	other metabolic processes	P	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)
ruditapes_c12596	heart development	developmental processes	P	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)
ruditapes_c12596	cell surface receptor linked signal transduction	signal transduction	P	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)
ruditapes_c12596	regulation of muscle contraction	other biological processes	P	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)
ruditapes_c12596	signal transduction	signal transduction	P	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)
ruditapes_c12596	activation of adenylate cyclase activity by G-protein signaling pathway	signal transduction	P	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)
ruditapes_c7972	ion transport	transport	P	Voltage-dependent anion-selective channel protein 3 (VDAC-3) (rVDAC3) (Outer mitochondrial membrane protein porin 3)
ruditapes_c7972	anion transport	transport	P	Voltage-dependent anion-selective channel protein 3 (VDAC-3) (rVDAC3) (Outer mitochondrial membrane protein porin 3)
ruditapes_c7972	transport	transport	P	Voltage-dependent anion-selective channel protein 3 (VDAC-3) (rVDAC3) (Outer mitochondrial membrane protein porin 3)
ruditapes_c7972	regulation of anion transport	transport	P	Voltage-dependent anion-selective channel protein 3 (VDAC-3) (rVDAC3) (Outer mitochondrial membrane protein porin 3)
ruditapes_c7972	transmembrane transport	transport	P	Voltage-dependent anion-selective channel protein 3 (VDAC-3) (rVDAC3) (Outer mitochondrial membrane protein porin 3)
ruditapes_c11944	lipopolysaccharide biosynthetic process	other metabolic processes	P	Lipopolysaccharide core heptose(I) kinase RfaP (EC 2.7.1.-)
ruditapes_c11944	phosphorylation	other metabolic processes	P	Lipopolysaccharide core heptose(I) kinase RfaP (EC 2.7.1.-)
ruditapes_c19142	metabolic process	other metabolic processes	P	Mycosubtilin synthase subunit A (EC 2.3.1.-) [Includes: Glutamate-1-semialdehyde aminotransferase (GSA-AT); ATP-dependent asparagine adenylase 1 (AsnA 1) (Asparagine activase 1)]
ruditapes_c19142	antibiotic biosynthetic process	other metabolic processes	P	Mycosubtilin synthase subunit A (EC 2.3.1.-) [Includes: Glutamate-1-semialdehyde aminotransferase (GSA-AT); ATP-dependent asparagine adenylase 1 (AsnA 1) (Asparagine activase 1)]
ruditapes_c9452	biosynthetic process	other metabolic processes	P	Lipopolysaccharide core biosynthesis glycosyltransferase LpsE (EC 2.4.-.-)
ruditapes_c9452	lipopolysaccharide biosynthetic process	other metabolic processes	P	Lipopolysaccharide core biosynthesis glycosyltransferase LpsE (EC 2.4.-.-)
ruditapes_c22399	protein metabolic process	protein metabolism	P	Chaperone protein ClpB
ruditapes_c22399	response to heat	stress response	P	Chaperone protein ClpB
ruditapes_c22399	response to stress	stress response	P	Chaperone protein ClpB
ruditapes_c22399	protein processing	protein metabolism	P	Chaperone protein ClpB
ruditapes_c5227	DNA repair	stress response	P	DNA replication and repair protein RecF
ruditapes_c5227	DNA repair	DNA metabolism	P	DNA replication and repair protein RecF
ruditapes_c5227	response to DNA damage stimulus	stress response	P	DNA replication and repair protein RecF
ruditapes_c5227	DNA replication	DNA metabolism	P	DNA replication and repair protein RecF
ruditapes_c5227	SOS response	stress response	P	DNA replication and repair protein RecF
ruditapes2_c1339	adhesion to host	other biological processes	P	F17f-G fimbrial adhesin
ruditapes2_c1339	pathogenesis	other biological processes	P	F17f-G fimbrial adhesin
ruditapes2_c1339	cell adhesion	cell adhesion	P	F17f-G fimbrial adhesin
ruditapes_c10752	purine base metabolic process	other metabolic processes	P	Allantoinase (EC 3.5.2.5) (Allantoin-utilizing enzyme)
ruditapes_c10752	allantoin catabolic process	other metabolic processes	P	Allantoinase (EC 3.5.2.5) (Allantoin-utilizing enzyme)
ruditapes_c26644	peptidoglycan catabolic process	other metabolic processes	P	Uncharacterized cell wall amidase pXO2-42/BXB0045/GBAA
ruditapes_c2438	cell cycle	cell cycle and proliferation	P	DNA translocase FtsK (DNA translocase SpoIIIE)
ruditapes_c2438	chromosome segregation	other biological processes	P	DNA translocase FtsK (DNA translocase SpoIIIE)
ruditapes_c2438	sporulation resulting in formation of a cellular spore	other biological processes	P	DNA translocase FtsK (DNA translocase SpoIIIE)
ruditapes_c2438	cell division	other biological processes	P	DNA translocase FtsK (DNA translocase SpoIIIE)
ruditapes_c1640	pathogenesis	other biological processes	P	Type IV secretion system protein virB4
ruditapes_c21313	ion transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c21313	proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c21313	ATP biosynthetic process	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c21313	transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c21313	ATP synthesis coupled proton transport	transport	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c21313	ATP synthesis coupled proton transport	other metabolic processes	P	ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit)
ruditapes_c4664	response to DNA damage stimulus	stress response	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c4664	DNA repair	stress response	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c4664	DNA repair	DNA metabolism	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c4664	base-excision repair	stress response	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c4664	base-excision repair	DNA metabolism	P	Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)
ruditapes_c9700	branched chain family amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c9700	carboxylic acid metabolic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c9700	leucine biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes_c9700	cellular amino acid biosynthetic process	other metabolic processes	P	2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) (Alpha-isopropylmalate synthase)
ruditapes2_c3538	transport	transport	P	Probable ABC transporter-binding protein DR
ruditapes_c11121	methylation	other metabolic processes	P	Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c11121	RNA methylation	RNA metabolism	P	Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c11121	rRNA processing	RNA metabolism	P	Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.-) (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase)
ruditapes_c27960	transport	transport	P	Sugar efflux transporter B
ruditapes_c27960	transmembrane transport	transport	P	Sugar efflux transporter B
ruditapes_c27960	carbohydrate transport	transport	P	Sugar efflux transporter B
ruditapes_lrc20778	cytidine deamination	other metabolic processes	P	Cytidine deaminase (CDA) (EC 3.5.4.5) (Cytidine aminohydrolase)
ruditapes_c28374	biological_process	other biological processes	P	Outer membrane protein 40 (Omp40) (PG33)
ruditapes_c32072	galactose metabolic process	other metabolic processes	P	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)
ruditapes_c32072	carbohydrate metabolic process	other metabolic processes	P	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)
ruditapes_c28376	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	CHD3-type chromatin-remodeling factor PICKLE (EC 3.6.4.-) (Protein GYMNOS)
ruditapes_c28376	root development	developmental processes	P	CHD3-type chromatin-remodeling factor PICKLE (EC 3.6.4.-) (Protein GYMNOS)
ruditapes_c28376	cell proliferation	cell cycle and proliferation	P	CHD3-type chromatin-remodeling factor PICKLE (EC 3.6.4.-) (Protein GYMNOS)
ruditapes_c28376	cytokinin mediated signaling	signal transduction	P	CHD3-type chromatin-remodeling factor PICKLE (EC 3.6.4.-) (Protein GYMNOS)
ruditapes_c28376	response to auxin stimulus	other biological processes	P	CHD3-type chromatin-remodeling factor PICKLE (EC 3.6.4.-) (Protein GYMNOS)
ruditapes_c28376	negative regulation of abscisic acid mediated signaling	signal transduction	P	CHD3-type chromatin-remodeling factor PICKLE (EC 3.6.4.-) (Protein GYMNOS)
ruditapes_c28376	response to gibberellin stimulus	other biological processes	P	CHD3-type chromatin-remodeling factor PICKLE (EC 3.6.4.-) (Protein GYMNOS)
ruditapes_c25811	embryonic meristem development	developmental processes	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	radial axis specification	developmental processes	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	response to water deprivation	stress response	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	pollen germination	other biological processes	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	protein homooligomerization	cell organization and biogenesis	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	multicellular organismal development	developmental processes	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	lignin metabolic process	other metabolic processes	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	longitudinal axis specification	developmental processes	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	meristem maintenance	developmental processes	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	protein amino acid phosphorylation	protein metabolism	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	response to cold	stress response	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	pollen maturation	developmental processes	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	anther development	developmental processes	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c25811	phosphorylation	other metabolic processes	P	LRR receptor-like serine/threonine-protein kinase RPK2 (EC 2.7.11.1) (Protein TOADSTOOL 2) (Receptor-like protein kinase 2)
ruditapes_c28462	transport	transport	P	Transmembrane emp24 domain-containing protein p24beta2 (p24 family protein beta1) (p24beta1) (p24 family protein beta2) (p24beta2)
ruditapes_c18279	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	"Pentatricopeptide repeat-containing protein At1g74850, chloroplastic (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2)"
ruditapes_c18279	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Pentatricopeptide repeat-containing protein At1g74850, chloroplastic (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2)"
ruditapes_c18279	transcription from plastid promoter	RNA metabolism	P	"Pentatricopeptide repeat-containing protein At1g74850, chloroplastic (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2)"
ruditapes_c18279	transcription from plastid promoter	cell organization and biogenesis	P	"Pentatricopeptide repeat-containing protein At1g74850, chloroplastic (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2)"
ruditapes_c18279	"transcription, DNA-dependent"	RNA metabolism	P	"Pentatricopeptide repeat-containing protein At1g74850, chloroplastic (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2)"
ruditapes_c17879	phosphorylation	other metabolic processes	P	Wall-associated receptor kinase-like 4 (EC 2.7.11.-)
ruditapes_c17879	response to nickel ion	other biological processes	P	Wall-associated receptor kinase-like 4 (EC 2.7.11.-)
ruditapes_c17879	protein amino acid phosphorylation	protein metabolism	P	Wall-associated receptor kinase-like 4 (EC 2.7.11.-)
ruditapes_c17879	response to cadmium ion	other biological processes	P	Wall-associated receptor kinase-like 4 (EC 2.7.11.-)
ruditapes_c17879	response to zinc ion	other biological processes	P	Wall-associated receptor kinase-like 4 (EC 2.7.11.-)
ruditapes_c14323	phosphorylation	other metabolic processes	P	Probable receptor-like protein kinase At1g30570 (EC 2.7.11.-)
ruditapes_c14323	protein amino acid phosphorylation	protein metabolism	P	Probable receptor-like protein kinase At1g30570 (EC 2.7.11.-)
ruditapes_c25734	response to stress	stress response	P	Heat shock 70 kDa protein 16 (Heat shock protein 70-16) (AtHsp70-16)
ruditapes_c8772	response to abscisic acid stimulus	other biological processes	P	NADPH--cytochrome P450 reductase 1 (EC 1.6.2.4)
ruditapes_c8772	oxidation reduction	other metabolic processes	P	NADPH--cytochrome P450 reductase 1 (EC 1.6.2.4)
ruditapes_c8772	response to oxidative stress	stress response	P	NADPH--cytochrome P450 reductase 1 (EC 1.6.2.4)
ruditapes_c8772	phenylpropanoid metabolic process	other metabolic processes	P	NADPH--cytochrome P450 reductase 1 (EC 1.6.2.4)
ruditapes_c24890	oxidation reduction	other metabolic processes	P	Peroxidase 42 (Atperox P42) (EC 1.11.1.7) (ATP1a/ATP1b) (PRXR1)
ruditapes_c24890	rhythmic process	other biological processes	P	Peroxidase 42 (Atperox P42) (EC 1.11.1.7) (ATP1a/ATP1b) (PRXR1)
ruditapes_c24890	hydrogen peroxide catabolic process	stress response	P	Peroxidase 42 (Atperox P42) (EC 1.11.1.7) (ATP1a/ATP1b) (PRXR1)
ruditapes_c24890	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidase 42 (Atperox P42) (EC 1.11.1.7) (ATP1a/ATP1b) (PRXR1)
ruditapes_c24890	response to oxidative stress	stress response	P	Peroxidase 42 (Atperox P42) (EC 1.11.1.7) (ATP1a/ATP1b) (PRXR1)
ruditapes_lrc37496	fatty acid biosynthetic process	other metabolic processes	P	Jasmonate O-methyltransferase (EC 2.1.1.141) (Floral nectary-specific protein 1) (S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase)
ruditapes_lrc37496	methylation	other metabolic processes	P	Jasmonate O-methyltransferase (EC 2.1.1.141) (Floral nectary-specific protein 1) (S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase)
ruditapes_lrc37496	lipid biosynthetic process	other metabolic processes	P	Jasmonate O-methyltransferase (EC 2.1.1.141) (Floral nectary-specific protein 1) (S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase)
ruditapes_lrc37496	oxylipin biosynthetic process	other metabolic processes	P	Jasmonate O-methyltransferase (EC 2.1.1.141) (Floral nectary-specific protein 1) (S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase)
ruditapes_c27948	metabolic process	other metabolic processes	P	UDP-glycosyltransferase 73D1 (EC 2.4.1.-)
ruditapes_c8297	metabolic process	other metabolic processes	P	Beta-galactosidase 9 (Lactase 9) (EC 3.2.1.23)
ruditapes_c8297	carbohydrate metabolic process	other metabolic processes	P	Beta-galactosidase 9 (Lactase 9) (EC 3.2.1.23)
ruditapes_c24604	carbohydrate metabolic process	other metabolic processes	P	Beta-galactosidase 1 (Lactase 1) (EC 3.2.1.23)
ruditapes_c24604	metabolic process	other metabolic processes	P	Beta-galactosidase 1 (Lactase 1) (EC 3.2.1.23)
ruditapes_c14857	biological_process	other biological processes	P	Putative F-box protein At3g47150
ruditapes_c14946	biological_process	other biological processes	P	Protein Asterix
ruditapes_c353	potassium ion transport	transport	P	FH protein interacting protein FIP2 (BTB/POZ domain-containing protein At5g55000)
ruditapes_c3830	potassium ion transport	transport	P	FH protein interacting protein FIP2 (BTB/POZ domain-containing protein At5g55000)
ruditapes_c7050	potassium ion transport	transport	P	FH protein interacting protein FIP2 (BTB/POZ domain-containing protein At5g55000)
ruditapes_c1373	potassium ion transport	transport	P	FH protein interacting protein FIP2 (BTB/POZ domain-containing protein At5g55000)
ruditapes_c10685	metabolic process	other metabolic processes	P	Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase)
ruditapes_c10685	biosynthetic process	other metabolic processes	P	Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase)
ruditapes_c10685	flavonoid biosynthetic process	other metabolic processes	P	Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase)
ruditapes_c15512	lipid catabolic process	other metabolic processes	P	GDSL esterase/lipase At3g09930 (EC 3.1.1.-) (Extracellular lipase At3g09930)
ruditapes_c15512	lipid metabolic process	other metabolic processes	P	GDSL esterase/lipase At3g09930 (EC 3.1.1.-) (Extracellular lipase At3g09930)
ruditapes_c13474	secondary shoot formation	developmental processes	P	Methyl-CpG-binding domain-containing protein 9 (AtMBD9) (MBD09) (EC 2.3.1.48) (Histone acetyl transferase MBD9) (Methyl-CpG-binding protein MBD9)
ruditapes_c13474	histone H3 acetylation	protein metabolism	P	Methyl-CpG-binding domain-containing protein 9 (AtMBD9) (MBD09) (EC 2.3.1.48) (Histone acetyl transferase MBD9) (Methyl-CpG-binding protein MBD9)
ruditapes_c13474	histone H3 acetylation	cell organization and biogenesis	P	Methyl-CpG-binding domain-containing protein 9 (AtMBD9) (MBD09) (EC 2.3.1.48) (Histone acetyl transferase MBD9) (Methyl-CpG-binding protein MBD9)
ruditapes_c13474	histone acetylation	protein metabolism	P	Methyl-CpG-binding domain-containing protein 9 (AtMBD9) (MBD09) (EC 2.3.1.48) (Histone acetyl transferase MBD9) (Methyl-CpG-binding protein MBD9)
ruditapes_c13474	histone H4 acetylation	protein metabolism	P	Methyl-CpG-binding domain-containing protein 9 (AtMBD9) (MBD09) (EC 2.3.1.48) (Histone acetyl transferase MBD9) (Methyl-CpG-binding protein MBD9)
ruditapes_c13474	histone H4 acetylation	cell organization and biogenesis	P	Methyl-CpG-binding domain-containing protein 9 (AtMBD9) (MBD09) (EC 2.3.1.48) (Histone acetyl transferase MBD9) (Methyl-CpG-binding protein MBD9)
ruditapes_c13474	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Methyl-CpG-binding domain-containing protein 9 (AtMBD9) (MBD09) (EC 2.3.1.48) (Histone acetyl transferase MBD9) (Methyl-CpG-binding protein MBD9)
ruditapes_c13474	"transcription, DNA-dependent"	RNA metabolism	P	Methyl-CpG-binding domain-containing protein 9 (AtMBD9) (MBD09) (EC 2.3.1.48) (Histone acetyl transferase MBD9) (Methyl-CpG-binding protein MBD9)
ruditapes_c13474	"photoperiodism, flowering"	developmental processes	P	Methyl-CpG-binding domain-containing protein 9 (AtMBD9) (MBD09) (EC 2.3.1.48) (Histone acetyl transferase MBD9) (Methyl-CpG-binding protein MBD9)
ruditapes_c13474	histone acetylation	cell organization and biogenesis	P	Methyl-CpG-binding domain-containing protein 9 (AtMBD9) (MBD09) (EC 2.3.1.48) (Histone acetyl transferase MBD9) (Methyl-CpG-binding protein MBD9)
ruditapes_c8944	electron transport chain	other metabolic processes	P	"Thioredoxin-like protein CDSP32, chloroplastic (Chloroplastic drought-induced stress protein of 32 KDa) (AtCDSP32)"
ruditapes_c8944	cell redox homeostasis	other biological processes	P	"Thioredoxin-like protein CDSP32, chloroplastic (Chloroplastic drought-induced stress protein of 32 KDa) (AtCDSP32)"
ruditapes_c8944	transport	transport	P	"Thioredoxin-like protein CDSP32, chloroplastic (Chloroplastic drought-induced stress protein of 32 KDa) (AtCDSP32)"
ruditapes_c8944	response to water deprivation	stress response	P	"Thioredoxin-like protein CDSP32, chloroplastic (Chloroplastic drought-induced stress protein of 32 KDa) (AtCDSP32)"
ruditapes_c8944	response to oxidative stress	stress response	P	"Thioredoxin-like protein CDSP32, chloroplastic (Chloroplastic drought-induced stress protein of 32 KDa) (AtCDSP32)"
ruditapes_c8944	glycerol ether metabolic process	other metabolic processes	P	"Thioredoxin-like protein CDSP32, chloroplastic (Chloroplastic drought-induced stress protein of 32 KDa) (AtCDSP32)"
ruditapes_c22824	biological_process	other biological processes	P	Cysteine-rich repeat secretory protein 8
ruditapes_c7051	phloem transport	transport	P	"Callose synthase 7 (EC 2.4.1.34) (1,3-beta-glucan synthase) (Protein GLUCAN SYNTHASE-LIKE 7)"
ruditapes_c7051	"1,3-beta-glucan biosynthetic process"	other metabolic processes	P	"Callose synthase 7 (EC 2.4.1.34) (1,3-beta-glucan synthase) (Protein GLUCAN SYNTHASE-LIKE 7)"
ruditapes_c7051	regulation of cell shape	cell organization and biogenesis	P	"Callose synthase 7 (EC 2.4.1.34) (1,3-beta-glucan synthase) (Protein GLUCAN SYNTHASE-LIKE 7)"
ruditapes_c7051	cell wall organization	cell organization and biogenesis	P	"Callose synthase 7 (EC 2.4.1.34) (1,3-beta-glucan synthase) (Protein GLUCAN SYNTHASE-LIKE 7)"
ruditapes_c13851	oxidation reduction	other metabolic processes	P	Polyprenol reductase 2 (EC 1.3.1.94)
ruditapes_c13851	lipid metabolic process	other metabolic processes	P	Polyprenol reductase 2 (EC 1.3.1.94)
ruditapes_c1826	embryonic development ending in seed dormancy	developmental processes	P	Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase (AtAAT) (AtPPA-AT) (EC 2.6.1.1) (EC 2.6.1.78) (EC 2.6.1.79) (Protein MATERNAL EFFECT EMBRYO ARREST 17)
ruditapes_c1826	"aromatic amino acid family biosynthetic process, prephenate pathway"	other metabolic processes	P	Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase (AtAAT) (AtPPA-AT) (EC 2.6.1.1) (EC 2.6.1.78) (EC 2.6.1.79) (Protein MATERNAL EFFECT EMBRYO ARREST 17)
ruditapes_c1826	cellular amino acid biosynthetic process	other metabolic processes	P	Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase (AtAAT) (AtPPA-AT) (EC 2.6.1.1) (EC 2.6.1.78) (EC 2.6.1.79) (Protein MATERNAL EFFECT EMBRYO ARREST 17)
ruditapes_c1826	biosynthetic process	other metabolic processes	P	Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase (AtAAT) (AtPPA-AT) (EC 2.6.1.1) (EC 2.6.1.78) (EC 2.6.1.79) (Protein MATERNAL EFFECT EMBRYO ARREST 17)
ruditapes_s39369	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 24 (EC 2.7.11.1)
ruditapes_s39369	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 24 (EC 2.7.11.1)
ruditapes_c15874	"regulation of transcription, DNA-dependent"	RNA metabolism	P	BEL1-like homeodomain protein 7 (BEL1-like protein 7)
ruditapes_c15874	"transcription, DNA-dependent"	RNA metabolism	P	BEL1-like homeodomain protein 7 (BEL1-like protein 7)
ruditapes_c15405	intracellular protein transport	transport	P	Coatomer subunit alpha-2 (Alpha-coat protein 2) (Alpha-COP 2)
ruditapes_c15405	vesicle-mediated transport	transport	P	Coatomer subunit alpha-2 (Alpha-coat protein 2) (Alpha-COP 2)
ruditapes_c15405	protein transport	transport	P	Coatomer subunit alpha-2 (Alpha-coat protein 2) (Alpha-COP 2)
ruditapes_c15405	transport	transport	P	Coatomer subunit alpha-2 (Alpha-coat protein 2) (Alpha-COP 2)
ruditapes_c26698	cellular component organization	cell organization and biogenesis	P	Formin-like protein 18 (AtFH18)
ruditapes_c26698	actin cytoskeleton organization	cell organization and biogenesis	P	Formin-like protein 18 (AtFH18)
ruditapes_c18611	regulation of photomorphogenesis	developmental processes	P	Zinc finger protein CONSTANS-LIKE 3
ruditapes_c18611	red light signaling pathway	signal transduction	P	Zinc finger protein CONSTANS-LIKE 3
ruditapes2_c2099	5-formyltetrahydrofolate transport	transport	P	"Folate-biopterin transporter 1, chloroplastic"
ruditapes2_c2099	folic acid transport	transport	P	"Folate-biopterin transporter 1, chloroplastic"
ruditapes_c16723	ubiquitin-dependent protein catabolic process	protein metabolism	P	SKP1-like protein 17 (AtSK17) (Protein MEIDOS)
ruditapes_c13547	metabolic process	other metabolic processes	P	Cycloartenol synthase (LcCAS1) (EC 5.4.99.8)
ruditapes_c4859	metabolic process	other metabolic processes	P	Cycloartenol synthase (LcCAS1) (EC 5.4.99.8)
ruditapes_c24473	response to lead ion	other biological processes	P	Acyl-CoA-binding domain-containing protein 1 (Acyl-CoA binding protein 1)
ruditapes_c24473	lipid metabolic process	other metabolic processes	P	Acyl-CoA-binding domain-containing protein 1 (Acyl-CoA binding protein 1)
ruditapes_c24473	transport	transport	P	Acyl-CoA-binding domain-containing protein 1 (Acyl-CoA binding protein 1)
ruditapes_c24473	lipid transport	transport	P	Acyl-CoA-binding domain-containing protein 1 (Acyl-CoA binding protein 1)
ruditapes_c24473	response to cold	stress response	P	Acyl-CoA-binding domain-containing protein 1 (Acyl-CoA binding protein 1)
ruditapes_s39580	ATP catabolic process	other metabolic processes	P	"Dynein-1-alpha heavy chain, flagellar inner arm I1 complex (1-alpha DHC) (Dynein-1, subspecies f)"
ruditapes_s39580	cell projection organization	cell organization and biogenesis	P	"Dynein-1-alpha heavy chain, flagellar inner arm I1 complex (1-alpha DHC) (Dynein-1, subspecies f)"
ruditapes_s39580	microtubule-based movement	other biological processes	P	"Dynein-1-alpha heavy chain, flagellar inner arm I1 complex (1-alpha DHC) (Dynein-1, subspecies f)"
ruditapes_c546	cell projection organization	cell organization and biogenesis	P	Cytoplasmic dynein 2 heavy chain 1 (Cytoplasmic dynein heavy chain 1b) (cDHC1b)
ruditapes_c546	multicellular organismal development	developmental processes	P	Cytoplasmic dynein 2 heavy chain 1 (Cytoplasmic dynein heavy chain 1b) (cDHC1b)
ruditapes_c546	ATP catabolic process	other metabolic processes	P	Cytoplasmic dynein 2 heavy chain 1 (Cytoplasmic dynein heavy chain 1b) (cDHC1b)
ruditapes_c546	microtubule-based movement	other biological processes	P	Cytoplasmic dynein 2 heavy chain 1 (Cytoplasmic dynein heavy chain 1b) (cDHC1b)
ruditapes_c546	flagellum assembly	cell organization and biogenesis	P	Cytoplasmic dynein 2 heavy chain 1 (Cytoplasmic dynein heavy chain 1b) (cDHC1b)
ruditapes_c19020	response to cadmium ion	other biological processes	P	4-coumarate--CoA ligase-like 10 (EC 6.2.1.-) (4-coumarate--CoA ligase isoform 8) (At4CL8) (Adenosine monophosphate binding protein 3) (AtMPBP3)
ruditapes_c19020	metabolic process	other metabolic processes	P	4-coumarate--CoA ligase-like 10 (EC 6.2.1.-) (4-coumarate--CoA ligase isoform 8) (At4CL8) (Adenosine monophosphate binding protein 3) (AtMPBP3)
ruditapes_c24534	regulation of ARF GTPase activity	signal transduction	P	ADP-ribosylation factor GTPase-activating protein AGD4 (ARF GAP AGD4) (GCN4-complementing protein 1) (Protein ARF-GAP DOMAIN 4) (AtAGD4)
ruditapes_c24534	positive regulation of GTPase activity	other biological processes	P	ADP-ribosylation factor GTPase-activating protein AGD4 (ARF GAP AGD4) (GCN4-complementing protein 1) (Protein ARF-GAP DOMAIN 4) (AtAGD4)
ruditapes_c10171	L-lysine catabolic process	other metabolic processes	P	Alpha-aminoadipic semialdehyde synthase (cAt-LKR/SDH) (LKR/SDH) [Includes: Lysine ketoglutarate reductase (LKR) (EC 1.5.1.8); Saccharopine dehydrogenase (EC 1.5.1.9) (cAt-SDH) (SDH)]
ruditapes_c19744	metabolic process	other metabolic processes	P	Alpha-aminoadipic semialdehyde synthase (cAt-LKR/SDH) (LKR/SDH) [Includes: Lysine ketoglutarate reductase (LKR) (EC 1.5.1.8); Saccharopine dehydrogenase (EC 1.5.1.9) (cAt-SDH) (SDH)]
ruditapes_c19744	oxidation reduction	other metabolic processes	P	Alpha-aminoadipic semialdehyde synthase (cAt-LKR/SDH) (LKR/SDH) [Includes: Lysine ketoglutarate reductase (LKR) (EC 1.5.1.8); Saccharopine dehydrogenase (EC 1.5.1.9) (cAt-SDH) (SDH)]
ruditapes_c19744	L-lysine catabolic process	other metabolic processes	P	Alpha-aminoadipic semialdehyde synthase (cAt-LKR/SDH) (LKR/SDH) [Includes: Lysine ketoglutarate reductase (LKR) (EC 1.5.1.8); Saccharopine dehydrogenase (EC 1.5.1.9) (cAt-SDH) (SDH)]
ruditapes_c10171	oxidation reduction	other metabolic processes	P	Alpha-aminoadipic semialdehyde synthase (cAt-LKR/SDH) (LKR/SDH) [Includes: Lysine ketoglutarate reductase (LKR) (EC 1.5.1.8); Saccharopine dehydrogenase (EC 1.5.1.9) (cAt-SDH) (SDH)]
ruditapes_c10171	metabolic process	other metabolic processes	P	Alpha-aminoadipic semialdehyde synthase (cAt-LKR/SDH) (LKR/SDH) [Includes: Lysine ketoglutarate reductase (LKR) (EC 1.5.1.8); Saccharopine dehydrogenase (EC 1.5.1.9) (cAt-SDH) (SDH)]
ruditapes_s39671	biological_process	other biological processes	P	LOB domain-containing protein 38 (ASYMMETRIC LEAVES 2-like protein 40) (AS2-like protein 40)
ruditapes_c9800	metabolic process	other metabolic processes	P	UDP-glycosyltransferase 76E6 (EC 2.4.1.-)
ruditapes_c22125	chromosome organization	cell organization and biogenesis	P	Telomerase reverse transcriptase (AtTERT) (EC 2.7.7.49)
ruditapes_c22125	RNA-dependent DNA replication	DNA metabolism	P	Telomerase reverse transcriptase (AtTERT) (EC 2.7.7.49)
ruditapes_c22125	telomere maintenance via telomerase	DNA metabolism	P	Telomerase reverse transcriptase (AtTERT) (EC 2.7.7.49)
ruditapes_c22125	telomere maintenance via telomerase	cell organization and biogenesis	P	Telomerase reverse transcriptase (AtTERT) (EC 2.7.7.49)
ruditapes_c22125	nucleolus organization	cell organization and biogenesis	P	Telomerase reverse transcriptase (AtTERT) (EC 2.7.7.49)
ruditapes_c22125	chromosome localization	other biological processes	P	Telomerase reverse transcriptase (AtTERT) (EC 2.7.7.49)
ruditapes_c8418	aromatic amino acid family biosynthetic process	other metabolic processes	P	"Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (DHQ-SDH protein) (DHQase-SORase) (Protein EMBRYO DEFECTIVE 3004) [Includes: Dehydroquinate dehydratase (DHQ) (EC 4.2.1.10); Shikimate dehydrogenase (SDH) (EC 1.1.1.25)]"
ruditapes_c8418	oxidation reduction	other metabolic processes	P	"Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (DHQ-SDH protein) (DHQase-SORase) (Protein EMBRYO DEFECTIVE 3004) [Includes: Dehydroquinate dehydratase (DHQ) (EC 4.2.1.10); Shikimate dehydrogenase (SDH) (EC 1.1.1.25)]"
ruditapes_c8418	embryonic development ending in seed dormancy	developmental processes	P	"Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (DHQ-SDH protein) (DHQase-SORase) (Protein EMBRYO DEFECTIVE 3004) [Includes: Dehydroquinate dehydratase (DHQ) (EC 4.2.1.10); Shikimate dehydrogenase (SDH) (EC 1.1.1.25)]"
ruditapes_c8418	metabolic process	other metabolic processes	P	"Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (DHQ-SDH protein) (DHQase-SORase) (Protein EMBRYO DEFECTIVE 3004) [Includes: Dehydroquinate dehydratase (DHQ) (EC 4.2.1.10); Shikimate dehydrogenase (SDH) (EC 1.1.1.25)]"
ruditapes_c8418	shikimate metabolic process	other metabolic processes	P	"Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (DHQ-SDH protein) (DHQase-SORase) (Protein EMBRYO DEFECTIVE 3004) [Includes: Dehydroquinate dehydratase (DHQ) (EC 4.2.1.10); Shikimate dehydrogenase (SDH) (EC 1.1.1.25)]"
ruditapes_c8418	cellular amino acid biosynthetic process	other metabolic processes	P	"Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (DHQ-SDH protein) (DHQase-SORase) (Protein EMBRYO DEFECTIVE 3004) [Includes: Dehydroquinate dehydratase (DHQ) (EC 4.2.1.10); Shikimate dehydrogenase (SDH) (EC 1.1.1.25)]"
ruditapes_c29691	amino acid transport	transport	P	Lysine histidine transporter-like 2
ruditapes_c29691	transport	transport	P	Lysine histidine transporter-like 2
ruditapes_c15384	phosphorylation	other metabolic processes	P	Probable L-type lectin-domain containing receptor kinase VI.1 (LecRK-VI.1) (EC 2.7.11.1)
ruditapes_c15384	protein amino acid phosphorylation	protein metabolism	P	Probable L-type lectin-domain containing receptor kinase VI.1 (LecRK-VI.1) (EC 2.7.11.1)
ruditapes_s35919	response to wounding	stress response	P	Calcium-binding protein CML38 (Calmodulin-like protein 38)
ruditapes_lrc33719	biological_process	other biological processes	P	Calcium-binding protein CML39 (Calmodulin-like protein 39)
ruditapes_s39227	biological_process	other biological processes	P	Calcium-binding protein CML39 (Calmodulin-like protein 39)
ruditapes2_lrc4547	biological_process	other biological processes	P	Calcium-binding protein CML39 (Calmodulin-like protein 39)
ruditapes2_lrc1702	biological_process	other biological processes	P	Calcium-binding protein CML39 (Calmodulin-like protein 39)
ruditapes_s39719	biological_process	other biological processes	P	Calcium-binding protein CML39 (Calmodulin-like protein 39)
ruditapes_lrc38367	biological_process	other biological processes	P	Calcium-binding protein CML39 (Calmodulin-like protein 39)
ruditapes2_lrc5073	biological_process	other biological processes	P	Calcium-binding protein CML39 (Calmodulin-like protein 39)
ruditapes_lrc33932	biological_process	other biological processes	P	Calcium-binding protein CML39 (Calmodulin-like protein 39)
ruditapes_c15142	response to aluminum ion	other biological processes	P	Aluminum-activated malate transporter 8 (AtALMT8)
ruditapes_c15142	ion transport	transport	P	Aluminum-activated malate transporter 8 (AtALMT8)
ruditapes_c15142	transport	transport	P	Aluminum-activated malate transporter 8 (AtALMT8)
ruditapes_c9633	lateral root formation	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c9633	response to auxin stimulus	other biological processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c7877	multicellular organismal development	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c9633	auxin mediated signaling pathway	signal transduction	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_lrc13569	inflorescence morphogenesis	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_lrc13569	protein ubiquitination	protein metabolism	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c7877	auxin mediated signaling pathway	signal transduction	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c7877	response to fungus	other biological processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c9633	protein ubiquitination	protein metabolism	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_lrc13569	multicellular organismal development	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c7877	auxin polar transport	transport	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c9633	multicellular organismal development	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c7877	photomorphogenesis	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c9633	response to fungus	other biological processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c7877	unidimensional cell growth	other biological processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_lrc13569	auxin mediated signaling pathway	signal transduction	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c7877	lateral root formation	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c7877	response to auxin stimulus	other biological processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c9633	auxin polar transport	transport	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c7877	protein ubiquitination	protein metabolism	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c9633	unidimensional cell growth	other biological processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c9633	root development	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_lrc13569	auxin polar transport	transport	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_lrc13569	photomorphogenesis	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_lrc13569	response to fungus	other biological processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c7877	root development	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c9633	inflorescence morphogenesis	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c9633	photomorphogenesis	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c7877	inflorescence morphogenesis	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_lrc13569	root development	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_lrc13569	lateral root formation	developmental processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_lrc13569	unidimensional cell growth	other biological processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_lrc13569	response to auxin stimulus	other biological processes	P	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
ruditapes_c13276	cellular response to water deprivation	stress response	P	BTB/POZ and MATH domain-containing protein 4 (Protein BTB-POZ AND MATH DOMAIN 4) (AtBPM4)
ruditapes_c13276	response to osmotic stress	stress response	P	BTB/POZ and MATH domain-containing protein 4 (Protein BTB-POZ AND MATH DOMAIN 4) (AtBPM4)
ruditapes_c20873	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase-like protein D5 (AtCslD5) (EC 2.4.1.-)
ruditapes_c20873	response to osmotic stress	stress response	P	Cellulose synthase-like protein D5 (AtCslD5) (EC 2.4.1.-)
ruditapes_c20873	response to salt stress	stress response	P	Cellulose synthase-like protein D5 (AtCslD5) (EC 2.4.1.-)
ruditapes_c20873	cell wall organization	cell organization and biogenesis	P	Cellulose synthase-like protein D5 (AtCslD5) (EC 2.4.1.-)
ruditapes_c20873	shoot development	developmental processes	P	Cellulose synthase-like protein D5 (AtCslD5) (EC 2.4.1.-)
ruditapes_c20873	response to water deprivation	stress response	P	Cellulose synthase-like protein D5 (AtCslD5) (EC 2.4.1.-)
ruditapes_c20873	cell wall biogenesis	other biological processes	P	Cellulose synthase-like protein D5 (AtCslD5) (EC 2.4.1.-)
ruditapes_s35378	metabolic process	other metabolic processes	P	"Probable acyl-activating enzyme 12, peroxisomal (EC 6.2.1.-)"
ruditapes_c3094	metabolic process	other metabolic processes	P	"Probable acyl-activating enzyme 12, peroxisomal (EC 6.2.1.-)"
ruditapes_s35303	metabolic process	other metabolic processes	P	"Probable acyl-activating enzyme 12, peroxisomal (EC 6.2.1.-)"
ruditapes_lrc6835	metabolic process	other metabolic processes	P	"Probable acyl-activating enzyme 12, peroxisomal (EC 6.2.1.-)"
ruditapes_s39709	metabolic process	other metabolic processes	P	"Probable acyl-activating enzyme 12, peroxisomal (EC 6.2.1.-)"
ruditapes_c23964	DNA topological change	DNA metabolism	P	"DNA gyrase subunit B, chloroplastic (EC 5.99.1.3)"
ruditapes_c13970	defense response	stress response	P	Putative disease resistance RPP13-like protein 3
ruditapes_c25160	phosphorylation	other metabolic processes	P	Receptor like protein kinase S.3 (LecRK-S.3) (EC 2.7.11.1)
ruditapes_c7185	protein amino acid phosphorylation	protein metabolism	P	Receptor like protein kinase S.3 (LecRK-S.3) (EC 2.7.11.1)
ruditapes_c7185	phosphorylation	other metabolic processes	P	Receptor like protein kinase S.3 (LecRK-S.3) (EC 2.7.11.1)
ruditapes_c25160	protein amino acid phosphorylation	protein metabolism	P	Receptor like protein kinase S.3 (LecRK-S.3) (EC 2.7.11.1)
ruditapes_c28142	oxidation reduction	other metabolic processes	P	Cytochrome P450 71A23 (EC 1.14.-.-)
ruditapes_c15195	transport	transport	P	ABC transporter A family member 7 (ABC transporter ABCA.7) (AtABCA7) (Probable ABC2 homolog 6)
ruditapes_c15195	ATP catabolic process	other metabolic processes	P	ABC transporter A family member 7 (ABC transporter ABCA.7) (AtABCA7) (Probable ABC2 homolog 6)
ruditapes_c18199	ATP catabolic process	other metabolic processes	P	ABC transporter A family member 4 (ABC transporter ABCA.4) (AtABCA4) (Putative ABC2 homolog 3)
ruditapes_c18199	transport	transport	P	ABC transporter A family member 4 (ABC transporter ABCA.4) (AtABCA4) (Putative ABC2 homolog 3)
ruditapes_lrc23128	methylation	other metabolic processes	P	Protein arginine N-methyltransferase 1.1 (AtPRMT11) (EC 2.1.1.-) (EC 2.1.1.125) (Arginine methyltransferase pam1) (Histone-arginine N-methyltransferase PRMT11)
ruditapes_lrc23128	histone arginine methylation	protein metabolism	P	Protein arginine N-methyltransferase 1.1 (AtPRMT11) (EC 2.1.1.-) (EC 2.1.1.125) (Arginine methyltransferase pam1) (Histone-arginine N-methyltransferase PRMT11)
ruditapes_lrc23128	histone arginine methylation	cell organization and biogenesis	P	Protein arginine N-methyltransferase 1.1 (AtPRMT11) (EC 2.1.1.-) (EC 2.1.1.125) (Arginine methyltransferase pam1) (Histone-arginine N-methyltransferase PRMT11)
ruditapes_lrc23128	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein arginine N-methyltransferase 1.1 (AtPRMT11) (EC 2.1.1.-) (EC 2.1.1.125) (Arginine methyltransferase pam1) (Histone-arginine N-methyltransferase PRMT11)
ruditapes_lrc23128	peptidyl-arginine N-methylation	protein metabolism	P	Protein arginine N-methyltransferase 1.1 (AtPRMT11) (EC 2.1.1.-) (EC 2.1.1.125) (Arginine methyltransferase pam1) (Histone-arginine N-methyltransferase PRMT11)
ruditapes_lrc23128	protein amino acid methylation	protein metabolism	P	Protein arginine N-methyltransferase 1.1 (AtPRMT11) (EC 2.1.1.-) (EC 2.1.1.125) (Arginine methyltransferase pam1) (Histone-arginine N-methyltransferase PRMT11)
ruditapes_lrc23128	chromatin modification	cell organization and biogenesis	P	Protein arginine N-methyltransferase 1.1 (AtPRMT11) (EC 2.1.1.-) (EC 2.1.1.125) (Arginine methyltransferase pam1) (Histone-arginine N-methyltransferase PRMT11)
ruditapes_lrc23128	"transcription, DNA-dependent"	RNA metabolism	P	Protein arginine N-methyltransferase 1.1 (AtPRMT11) (EC 2.1.1.-) (EC 2.1.1.125) (Arginine methyltransferase pam1) (Histone-arginine N-methyltransferase PRMT11)
ruditapes_c11463	fatty acid biosynthetic process	other metabolic processes	P	Fatty acid 2-hydroxylase 2 (AtFAH2) (EC 1.-.-.-)
ruditapes_c11463	negative regulation of programmed cell death	death	P	Fatty acid 2-hydroxylase 2 (AtFAH2) (EC 1.-.-.-)
ruditapes_c11463	oxidation reduction	other metabolic processes	P	Fatty acid 2-hydroxylase 2 (AtFAH2) (EC 1.-.-.-)
ruditapes2_c1854	biological_process	other biological processes	P	Uncharacterized GPI-anchored protein At4g28100
ruditapes_c23857	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase ATX4 (EC 2.1.1.43) (Protein SET DOMAIN GROUP 16) (Trithorax-homolog protein 4) (TRX-homolog protein 4) (Trithorax 4)
ruditapes_c23857	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase ATX4 (EC 2.1.1.43) (Protein SET DOMAIN GROUP 16) (Trithorax-homolog protein 4) (TRX-homolog protein 4) (Trithorax 4)
ruditapes_c23857	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase ATX4 (EC 2.1.1.43) (Protein SET DOMAIN GROUP 16) (Trithorax-homolog protein 4) (TRX-homolog protein 4) (Trithorax 4)
ruditapes_c23857	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase ATX4 (EC 2.1.1.43) (Protein SET DOMAIN GROUP 16) (Trithorax-homolog protein 4) (TRX-homolog protein 4) (Trithorax 4)
ruditapes_c2537	biological_process	other biological processes	P	Pentatricopeptide repeat-containing protein At4g30700 (Protein DYW9)
ruditapes2_c1865	cation transport	transport	P	Cation/H(+) antiporter 17 (Protein CATION/H+ EXCHANGER 17) (AtCHX17)
ruditapes2_c1865	transmembrane transport	transport	P	Cation/H(+) antiporter 17 (Protein CATION/H+ EXCHANGER 17) (AtCHX17)
ruditapes2_c1865	protein targeting to vacuole	transport	P	Cation/H(+) antiporter 17 (Protein CATION/H+ EXCHANGER 17) (AtCHX17)
ruditapes2_c1865	ion transport	transport	P	Cation/H(+) antiporter 17 (Protein CATION/H+ EXCHANGER 17) (AtCHX17)
ruditapes2_c1865	transport	transport	P	Cation/H(+) antiporter 17 (Protein CATION/H+ EXCHANGER 17) (AtCHX17)
ruditapes2_c1865	potassium ion transport	transport	P	Cation/H(+) antiporter 17 (Protein CATION/H+ EXCHANGER 17) (AtCHX17)
ruditapes2_c1865	regulation of pH	other biological processes	P	Cation/H(+) antiporter 17 (Protein CATION/H+ EXCHANGER 17) (AtCHX17)
ruditapes_c28604	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase-like protein At3g51990 (EC 2.7.11.1) (CRINKLY 4-related kinase)
ruditapes_c28604	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase-like protein At3g51990 (EC 2.7.11.1) (CRINKLY 4-related kinase)
ruditapes_c2501	response to stress	stress response	P	U-box domain-containing protein 35 (Plant U-box protein 35) [Includes: E3 ubiquitin ligase (EC 6.3.2.-); Serine/threonine-protein kinase (EC 2.7.11.-)]
ruditapes_c2501	protein amino acid phosphorylation	protein metabolism	P	U-box domain-containing protein 35 (Plant U-box protein 35) [Includes: E3 ubiquitin ligase (EC 6.3.2.-); Serine/threonine-protein kinase (EC 2.7.11.-)]
ruditapes_c2501	protein ubiquitination	protein metabolism	P	U-box domain-containing protein 35 (Plant U-box protein 35) [Includes: E3 ubiquitin ligase (EC 6.3.2.-); Serine/threonine-protein kinase (EC 2.7.11.-)]
ruditapes_c2501	phosphorylation	other metabolic processes	P	U-box domain-containing protein 35 (Plant U-box protein 35) [Includes: E3 ubiquitin ligase (EC 6.3.2.-); Serine/threonine-protein kinase (EC 2.7.11.-)]
ruditapes_c24325	secondary cell wall biogenesis	other biological processes	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes2_lrc5065	secondary cell wall biogenesis	other biological processes	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes_c24325	cell wall thickening	cell organization and biogenesis	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes_c24325	plant-type cell wall biogenesis	other biological processes	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes2_lrc5065	cell wall organization	cell organization and biogenesis	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes_c24325	rhamnogalacturonan I side chain metabolic process	other metabolic processes	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes_c24325	rhamnogalacturonan I side chain metabolic process	cell organization and biogenesis	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes2_lrc5065	rhamnogalacturonan I side chain metabolic process	other metabolic processes	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes2_lrc5065	rhamnogalacturonan I side chain metabolic process	cell organization and biogenesis	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes2_lrc5065	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes_c24325	cell wall organization	cell organization and biogenesis	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes2_lrc5065	plant-type cell wall biogenesis	other biological processes	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes2_lrc5065	cell wall thickening	cell organization and biogenesis	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes_c24325	cellulose biosynthetic process	other metabolic processes	P	Cellulose synthase A catalytic subunit 7 [UDP-forming] (AtCesA7) (EC 2.4.1.12) (Protein FRAGILE FIBER 5) (Protein IRREGULAR XYLEM 3) (AtIRX3)
ruditapes_c19722	glucosinolate biosynthetic process	other metabolic processes	P	Flavin-containing monooxygenase FMO GS-OX3 (EC 1.8.-.-) (Flavin-monooxygenase glucosinolate S-oxygenase 3)
ruditapes_c19722	oxidation reduction	other metabolic processes	P	Flavin-containing monooxygenase FMO GS-OX3 (EC 1.8.-.-) (Flavin-monooxygenase glucosinolate S-oxygenase 3)
ruditapes_c21886	cell division	other biological processes	P	Pentatricopeptide repeat-containing protein At1g10270 (Protein GLUTAMINE-RICH PROTEIN 23)
ruditapes_c21886	embryonic development	developmental processes	P	Pentatricopeptide repeat-containing protein At1g10270 (Protein GLUTAMINE-RICH PROTEIN 23)
ruditapes_c21886	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Pentatricopeptide repeat-containing protein At1g10270 (Protein GLUTAMINE-RICH PROTEIN 23)
ruditapes_c21886	"transcription, DNA-dependent"	RNA metabolism	P	Pentatricopeptide repeat-containing protein At1g10270 (Protein GLUTAMINE-RICH PROTEIN 23)
ruditapes_c13072	fatty acid biosynthetic process	other metabolic processes	P	3-ketoacyl-CoA synthase 16 (KCS-16) (EC 2.3.1.199) (Very long-chain fatty acid condensing enzyme 16) (VLCFA condensing enzyme 16)
ruditapes_c13072	response to light stimulus	other biological processes	P	3-ketoacyl-CoA synthase 16 (KCS-16) (EC 2.3.1.199) (Very long-chain fatty acid condensing enzyme 16) (VLCFA condensing enzyme 16)
ruditapes_c13072	lipid biosynthetic process	other metabolic processes	P	3-ketoacyl-CoA synthase 16 (KCS-16) (EC 2.3.1.199) (Very long-chain fatty acid condensing enzyme 16) (VLCFA condensing enzyme 16)
ruditapes_c13072	metabolic process	other metabolic processes	P	3-ketoacyl-CoA synthase 16 (KCS-16) (EC 2.3.1.199) (Very long-chain fatty acid condensing enzyme 16) (VLCFA condensing enzyme 16)
ruditapes_s39853	ATP metabolic process	other metabolic processes	P	"Copper-transporting ATPase PAA1, chloroplastic (EC 3.6.3.4) (EC 3.6.3.n1) (Protein HEAVY METAL ATPASE 6) (Protein glucose insensitive root 1)"
ruditapes_s39853	transport	transport	P	"Copper-transporting ATPase PAA1, chloroplastic (EC 3.6.3.4) (EC 3.6.3.n1) (Protein HEAVY METAL ATPASE 6) (Protein glucose insensitive root 1)"
ruditapes_s39853	cation transport	transport	P	"Copper-transporting ATPase PAA1, chloroplastic (EC 3.6.3.4) (EC 3.6.3.n1) (Protein HEAVY METAL ATPASE 6) (Protein glucose insensitive root 1)"
ruditapes_s39853	copper ion export	transport	P	"Copper-transporting ATPase PAA1, chloroplastic (EC 3.6.3.4) (EC 3.6.3.n1) (Protein HEAVY METAL ATPASE 6) (Protein glucose insensitive root 1)"
ruditapes_s39853	metal ion transport	transport	P	"Copper-transporting ATPase PAA1, chloroplastic (EC 3.6.3.4) (EC 3.6.3.n1) (Protein HEAVY METAL ATPASE 6) (Protein glucose insensitive root 1)"
ruditapes_s39853	metabolic process	other metabolic processes	P	"Copper-transporting ATPase PAA1, chloroplastic (EC 3.6.3.4) (EC 3.6.3.n1) (Protein HEAVY METAL ATPASE 6) (Protein glucose insensitive root 1)"
ruditapes_s39853	ion transport	transport	P	"Copper-transporting ATPase PAA1, chloroplastic (EC 3.6.3.4) (EC 3.6.3.n1) (Protein HEAVY METAL ATPASE 6) (Protein glucose insensitive root 1)"
ruditapes_s39853	ATP biosynthetic process	other metabolic processes	P	"Copper-transporting ATPase PAA1, chloroplastic (EC 3.6.3.4) (EC 3.6.3.n1) (Protein HEAVY METAL ATPASE 6) (Protein glucose insensitive root 1)"
ruditapes_s39853	photosynthetic electron transport chain	other metabolic processes	P	"Copper-transporting ATPase PAA1, chloroplastic (EC 3.6.3.4) (EC 3.6.3.n1) (Protein HEAVY METAL ATPASE 6) (Protein glucose insensitive root 1)"
ruditapes_s39853	copper ion transport	transport	P	"Copper-transporting ATPase PAA1, chloroplastic (EC 3.6.3.4) (EC 3.6.3.n1) (Protein HEAVY METAL ATPASE 6) (Protein glucose insensitive root 1)"
ruditapes_c23795	ATP catabolic process	other metabolic processes	P	ABC transporter G family member 9 (ABC transporter ABCG.9) (AtABCG9) (Probable white-brown complex homolog protein 9) (AtWBC9)
ruditapes_c23795	transport	transport	P	ABC transporter G family member 9 (ABC transporter ABCG.9) (AtABCG9) (Probable white-brown complex homolog protein 9) (AtWBC9)
ruditapes_c11189	metabolic process	other metabolic processes	P	UDP-glycosyltransferase 79B2 (EC 2.4.1.-)
ruditapes_c16631	biological_process	other biological processes	P	F-box protein At4g09920
ruditapes_c28351	cell wall organization	cell organization and biogenesis	P	Probable mannan synthase 15 (EC 2.4.1.-) (Cellulose synthase-like protein A15) (AtCslA15)
ruditapes2_c1054	"transcription, DNA-dependent"	RNA metabolism	P	Putative protein P2
ruditapes2_c1054	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative protein P2
ruditapes_c27404	photosynthesis	other metabolic processes	P	"Photosystem I reaction center subunit II, cyanelle (Photosystem I 20 kDa subunit) (PSI-D)"
ruditapes_c6600	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c6600	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c6600	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c11735	aerobic respiration	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_c11735	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_c11735	oxidation reduction	other metabolic processes	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes_c11735	transport	transport	P	Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
ruditapes2_c5563	transport	transport	P	Cytochrome c oxidase subunit 2 (Cytochrome c oxidase polypeptide II)
ruditapes2_c5563	electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (Cytochrome c oxidase polypeptide II)
ruditapes2_c5563	respiratory electron transport chain	other metabolic processes	P	Cytochrome c oxidase subunit 2 (Cytochrome c oxidase polypeptide II)
ruditapes_c12430	respiratory electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c12430	electron transport chain	other metabolic processes	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c12430	transport	transport	P	Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
ruditapes_c31689	tricarboxylic acid cycle	other metabolic processes	P	"2-methylcitrate synthase, mitochondrial (Methylcitrate synthase) (EC 2.3.3.5) (Citrate synthase 2)"
ruditapes_c31689	"propionate metabolic process, methylcitrate cycle"	other metabolic processes	P	"2-methylcitrate synthase, mitochondrial (Methylcitrate synthase) (EC 2.3.3.5) (Citrate synthase 2)"
ruditapes_c31689	cellular carbohydrate metabolic process	other metabolic processes	P	"2-methylcitrate synthase, mitochondrial (Methylcitrate synthase) (EC 2.3.3.5) (Citrate synthase 2)"
ruditapes2_lrc3126	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'')
ruditapes_c9972	translation	protein metabolism	P	"50S ribosomal protein L5, chloroplastic"
ruditapes_c14117	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit alpha, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)"
ruditapes_c14117	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit alpha, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)"
ruditapes_c14117	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit alpha, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)"
ruditapes_c14117	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit alpha, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)"
ruditapes_c14117	transport	transport	P	"ATP synthase subunit alpha, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)"
ruditapes_c14117	proton transport	transport	P	"ATP synthase subunit alpha, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)"
ruditapes_c14117	ion transport	transport	P	"ATP synthase subunit alpha, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)"
ruditapes_c14117	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit alpha, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)"
ruditapes_c26073	proteolysis	protein metabolism	P	Renin (EC 3.4.23.15) (Angiotensinogenase)
ruditapes_c20720	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Doublesex- and mab-3-related transcription factor 1
ruditapes_c20720	"transcription, DNA-dependent"	RNA metabolism	P	Doublesex- and mab-3-related transcription factor 1
ruditapes_c20720	cell differentiation	other biological processes	P	Doublesex- and mab-3-related transcription factor 1
ruditapes_c20720	sex differentiation	other biological processes	P	Doublesex- and mab-3-related transcription factor 1
ruditapes_c20720	multicellular organismal development	developmental processes	P	Doublesex- and mab-3-related transcription factor 1
ruditapes_c19562	proteolysis	protein metabolism	P	A disintegrin and metalloproteinase with thrombospondin motifs 5 (ADAM-TS 5) (ADAM-TS5) (ADAMTS-5) (EC 3.4.24.-) (ADMP-2) (Aggrecanase-2) (Fragment)
ruditapes2_lrc4908	protein folding	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin 18) (Cyclophilin A) (Cyclosporin A-binding protein) (Rotamase A)
ruditapes2_lrc4908	protein peptidyl-prolyl isomerization	protein metabolism	P	Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin 18) (Cyclophilin A) (Cyclosporin A-binding protein) (Rotamase A)
ruditapes2_lrc4908	regulation of viral genome replication	other biological processes	P	Peptidyl-prolyl cis-trans isomerase A (PPIase A) (EC 5.2.1.8) (Cyclophilin 18) (Cyclophilin A) (Cyclosporin A-binding protein) (Rotamase A)
ruditapes_c37548	L-ascorbic acid biosynthetic process	other metabolic processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17) (Senescence marker protein 30) (SMP-30)
ruditapes_lrc27689	L-ascorbic acid biosynthetic process	other metabolic processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17) (Senescence marker protein 30) (SMP-30)
ruditapes_c37548	regulation of catalytic activity	other biological processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17) (Senescence marker protein 30) (SMP-30)
ruditapes_lrc27689	regulation of catalytic activity	other biological processes	P	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17) (Senescence marker protein 30) (SMP-30)
ruditapes_c25611	endosome to lysosome transport via multivesicular body sorting pathway	transport	P	Lysosomal-trafficking regulator
ruditapes_c25611	natural killer cell mediated cytotoxicity	stress response	P	Lysosomal-trafficking regulator
ruditapes_c25611	natural killer cell mediated cytotoxicity	death	P	Lysosomal-trafficking regulator
ruditapes_c25611	transport	transport	P	Lysosomal-trafficking regulator
ruditapes_c25611	pigmentation	other biological processes	P	Lysosomal-trafficking regulator
ruditapes_c25611	protein transport	transport	P	Lysosomal-trafficking regulator
ruditapes_c21443	cell adhesion	cell adhesion	P	"Oxidized low-density lipoprotein receptor 1 (Ox-LDL receptor 1) (Lectin-like oxidized LDL receptor 1) (LOX-1) (Lectin-like oxLDL receptor 1) (Lectin-type oxidized LDL receptor 1) [Cleaved into: Oxidized low-density lipoprotein receptor 1, soluble form]"
ruditapes_c21443	inflammatory response	stress response	P	"Oxidized low-density lipoprotein receptor 1 (Ox-LDL receptor 1) (Lectin-like oxidized LDL receptor 1) (LOX-1) (Lectin-like oxLDL receptor 1) (Lectin-type oxidized LDL receptor 1) [Cleaved into: Oxidized low-density lipoprotein receptor 1, soluble form]"
ruditapes_c20348	endocytosis	transport	P	H(+)/Cl(-) exchange transporter 5 (Chloride channel protein 5) (ClC-5) (Chloride transporter ClC-5)
ruditapes_c20348	endocytosis	cell organization and biogenesis	P	H(+)/Cl(-) exchange transporter 5 (Chloride channel protein 5) (ClC-5) (Chloride transporter ClC-5)
ruditapes_c20348	ion transport	transport	P	H(+)/Cl(-) exchange transporter 5 (Chloride channel protein 5) (ClC-5) (Chloride transporter ClC-5)
ruditapes_c20348	transmembrane transport	transport	P	H(+)/Cl(-) exchange transporter 5 (Chloride channel protein 5) (ClC-5) (Chloride transporter ClC-5)
ruditapes_c20348	chloride transport	transport	P	H(+)/Cl(-) exchange transporter 5 (Chloride channel protein 5) (ClC-5) (Chloride transporter ClC-5)
ruditapes_c20348	transport	transport	P	H(+)/Cl(-) exchange transporter 5 (Chloride channel protein 5) (ClC-5) (Chloride transporter ClC-5)
ruditapes_lrc39184	steroid metabolic process	other metabolic processes	P	Cubilin
ruditapes_lrc35236	lipoprotein transport	transport	P	Cubilin
ruditapes_lrc35236	protein transport	transport	P	Cubilin
ruditapes_lrc35236	transport	transport	P	Cubilin
ruditapes_lrc39184	protein transport	transport	P	Cubilin
ruditapes_lrc35236	steroid metabolic process	other metabolic processes	P	Cubilin
ruditapes_lrc35236	lipid metabolic process	other metabolic processes	P	Cubilin
ruditapes_lrc39184	cholesterol metabolic process	other metabolic processes	P	Cubilin
ruditapes_lrc35236	receptor-mediated endocytosis	transport	P	Cubilin
ruditapes_lrc35236	receptor-mediated endocytosis	cell organization and biogenesis	P	Cubilin
ruditapes_lrc39184	lipoprotein transport	transport	P	Cubilin
ruditapes_lrc39184	transport	transport	P	Cubilin
ruditapes_lrc39184	receptor-mediated endocytosis	transport	P	Cubilin
ruditapes_lrc39184	receptor-mediated endocytosis	cell organization and biogenesis	P	Cubilin
ruditapes_lrc35236	cholesterol metabolic process	other metabolic processes	P	Cubilin
ruditapes_lrc39184	lipid metabolic process	other metabolic processes	P	Cubilin
ruditapes_s38921	SMAD protein signal transduction	signal transduction	P	Ski oncogene (Proto-oncogene c-Ski)
ruditapes_s38921	negative regulation of osteoblast differentiation	developmental processes	P	Ski oncogene (Proto-oncogene c-Ski)
ruditapes_s38921	negative regulation of cell proliferation	cell cycle and proliferation	P	Ski oncogene (Proto-oncogene c-Ski)
ruditapes_s38921	negative regulation of activin receptor signaling pathway	signal transduction	P	Ski oncogene (Proto-oncogene c-Ski)
ruditapes_s38921	negative regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	Ski oncogene (Proto-oncogene c-Ski)
ruditapes_s38921	positive regulation of DNA binding	other biological processes	P	Ski oncogene (Proto-oncogene c-Ski)
ruditapes_s38921	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Ski oncogene (Proto-oncogene c-Ski)
ruditapes_s38921	negative regulation of BMP signaling pathway	signal transduction	P	Ski oncogene (Proto-oncogene c-Ski)
ruditapes_c22874	fatty acid catabolic process	other metabolic processes	P	Fatty-acid amide hydrolase 1 (EC 3.5.1.99) (Anandamide amidohydrolase 1) (Oleamide hydrolase 1)
ruditapes_c12064	metabolic process	other metabolic processes	P	"Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC 1.3.1.20) (D-xylose 1-dehydrogenase) (D-xylose-NADP dehydrogenase) (EC 1.1.1.179) (Dimeric dihydrodiol dehydrogenase) (Sus2DD)"
ruditapes_c12064	oxidation reduction	other metabolic processes	P	"Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC 1.3.1.20) (D-xylose 1-dehydrogenase) (D-xylose-NADP dehydrogenase) (EC 1.1.1.179) (Dimeric dihydrodiol dehydrogenase) (Sus2DD)"
ruditapes_c12064	D-xylose catabolic process	other metabolic processes	P	"Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC 1.3.1.20) (D-xylose 1-dehydrogenase) (D-xylose-NADP dehydrogenase) (EC 1.1.1.179) (Dimeric dihydrodiol dehydrogenase) (Sus2DD)"
ruditapes_lrc34997	pathogenesis	other biological processes	P	Conotoxin AbVIG (Fragment)
ruditapes2_c5203	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_s35582	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_c126	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes2_c111	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_lrc6993	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_c4863	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_lrc36366	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes2_c165	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_lrc35445	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes2_c3629	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes2_lrc3400	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_s36642	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_lrc39545	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes2_c3653	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_s33205	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_lrc32633	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_lrc35053	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_lrc35700	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_c4629	lipid catabolic process	other metabolic processes	P	Conodipine-M alpha chain (PLA2) (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase)
ruditapes_c9025	transport	transport	P	Fatty acid-binding protein type 3
ruditapes_s39577	behavior	other biological processes	P	Polycystin-2 (CePc2) (Polycystic kidney disease 2 protein homolog)
ruditapes_s39577	transport	transport	P	Polycystin-2 (CePc2) (Polycystic kidney disease 2 protein homolog)
ruditapes_s39577	calcium ion transport	transport	P	Polycystin-2 (CePc2) (Polycystic kidney disease 2 protein homolog)
ruditapes_s39577	male mating behavior	other biological processes	P	Polycystin-2 (CePc2) (Polycystic kidney disease 2 protein homolog)
ruditapes_s39577	vulval location	other biological processes	P	Polycystin-2 (CePc2) (Polycystic kidney disease 2 protein homolog)
ruditapes_s39577	mating behavior	other biological processes	P	Polycystin-2 (CePc2) (Polycystic kidney disease 2 protein homolog)
ruditapes_s39577	response to hermaphrodite contact	other biological processes	P	Polycystin-2 (CePc2) (Polycystic kidney disease 2 protein homolog)
ruditapes_s39577	ion transport	transport	P	Polycystin-2 (CePc2) (Polycystic kidney disease 2 protein homolog)
ruditapes_s39577	transmembrane calcium ion transport	transport	P	Polycystin-2 (CePc2) (Polycystic kidney disease 2 protein homolog)
ruditapes_c24243	cell migration	other biological processes	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c24243	reproduction	other biological processes	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c24243	oviposition	other biological processes	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c24243	RNA splicing	RNA metabolism	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c24243	regulation of meiosis	cell cycle and proliferation	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c24243	regulation of cell proliferation	cell cycle and proliferation	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c24243	nematode larval development	developmental processes	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c24243	embryonic development ending in birth or egg hatching	developmental processes	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c24243	gonad development	developmental processes	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c24243	mRNA processing	RNA metabolism	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c24243	growth	other biological processes	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c24243	germ cell development	other biological processes	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_s39822	translational elongation	protein metabolism	P	Probable elongation factor 1-beta/1-delta 2 (EF-1-beta/delta 2)
ruditapes_c37594	translational elongation	protein metabolism	P	Probable elongation factor 1-beta/1-delta 2 (EF-1-beta/delta 2)
ruditapes_c37594	translation	protein metabolism	P	Probable elongation factor 1-beta/1-delta 2 (EF-1-beta/delta 2)
ruditapes_s39822	translation	protein metabolism	P	Probable elongation factor 1-beta/1-delta 2 (EF-1-beta/delta 2)
ruditapes2_c1721	induction of apoptosis	death	P	"Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] (EC 3.6.1.-) (Diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase) (Ap4A hydrolase) (Ap4Aase) (Diadenosine tetraphosphatase) (Nudix hydrolase 4)"
ruditapes2_c2620	positive regulation of growth rate	other biological processes	P	Polynucleotide 5'-hydroxyl-kinase nol-9 (EC 2.7.1.-) (Nucleolar protein 9 homolog)
ruditapes2_c2620	reproduction	other biological processes	P	Polynucleotide 5'-hydroxyl-kinase nol-9 (EC 2.7.1.-) (Nucleolar protein 9 homolog)
ruditapes2_c2620	response to DNA damage stimulus	stress response	P	Polynucleotide 5'-hydroxyl-kinase nol-9 (EC 2.7.1.-) (Nucleolar protein 9 homolog)
ruditapes2_c2620	rRNA processing	RNA metabolism	P	Polynucleotide 5'-hydroxyl-kinase nol-9 (EC 2.7.1.-) (Nucleolar protein 9 homolog)
ruditapes2_c2620	phosphorylation	other metabolic processes	P	Polynucleotide 5'-hydroxyl-kinase nol-9 (EC 2.7.1.-) (Nucleolar protein 9 homolog)
ruditapes_lrc35359	translational elongation	protein metabolism	P	60S acidic ribosomal protein P0 (CcP0)
ruditapes_lrc35359	ribosome biogenesis	other biological processes	P	60S acidic ribosomal protein P0 (CcP0)
ruditapes_c3535	ribosome biogenesis	other biological processes	P	60S acidic ribosomal protein P0 (CcP0)
ruditapes_c3535	translational elongation	protein metabolism	P	60S acidic ribosomal protein P0 (CcP0)
ruditapes2_c246	translational elongation	protein metabolism	P	60S acidic ribosomal protein P0 (CcP0)
ruditapes2_c246	ribosome biogenesis	other biological processes	P	60S acidic ribosomal protein P0 (CcP0)
ruditapes_c7811	cell differentiation	other biological processes	P	Protein xmas-1
ruditapes_c7811	female gamete generation	other biological processes	P	Protein xmas-1
ruditapes_c7811	multicellular organismal development	developmental processes	P	Protein xmas-1
ruditapes_c7811	embryonic development	developmental processes	P	Protein xmas-1
ruditapes_c7811	spermatogenesis	other biological processes	P	Protein xmas-1
ruditapes_c7811	oogenesis	other biological processes	P	Protein xmas-1
ruditapes_c28495	multicellular organismal development	developmental processes	P	Protein xmas-2
ruditapes_c28495	mRNA export from nucleus	transport	P	Protein xmas-2
ruditapes_c28495	poly(A)+ mRNA export from nucleus	transport	P	Protein xmas-2
ruditapes_c28495	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Protein xmas-2
ruditapes_c28495	spermatogenesis	other biological processes	P	Protein xmas-2
ruditapes_c28495	female gamete generation	other biological processes	P	Protein xmas-2
ruditapes_c28495	oogenesis	other biological processes	P	Protein xmas-2
ruditapes_c28495	embryonic development	developmental processes	P	Protein xmas-2
ruditapes_c28495	cell differentiation	other biological processes	P	Protein xmas-2
ruditapes_c30086	cell fate commitment	other biological processes	P	Protein mab-21
ruditapes_c30086	biological_process	other biological processes	P	Protein mab-21
ruditapes_c27118	"molting cycle, collagen and cuticulin-based cuticle"	other biological processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	epidermal cell fate specification	developmental processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	regulation of epidermal cell differentiation	developmental processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	"regulation of development, heterochronic"	other biological processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	apoptosis	death	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	tail tip morphogenesis	other biological processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	reproduction	other biological processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	multicellular organismal development	developmental processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	gamete generation	other biological processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	determination of adult life span	developmental processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	receptor-mediated endocytosis	transport	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	receptor-mediated endocytosis	cell organization and biogenesis	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	locomotion	other biological processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	body morphogenesis	other biological processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	nematode larval development	developmental processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	positive regulation of multicellular organism growth	other biological processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	negative regulation of vulval development	developmental processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes_c27118	morphogenesis of an epithelium	developmental processes	P	Protein lin-41 (Abnormal cell lineage protein 41)
ruditapes2_c624	anion transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog 1 (dtom40) (Male sterile protein 15) (Translocase of outer membrane 40 kDa subunit homolog 1)
ruditapes2_c624	regulation of anion transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog 1 (dtom40) (Male sterile protein 15) (Translocase of outer membrane 40 kDa subunit homolog 1)
ruditapes2_c624	protein targeting to mitochondrion	transport	P	Mitochondrial import receptor subunit TOM40 homolog 1 (dtom40) (Male sterile protein 15) (Translocase of outer membrane 40 kDa subunit homolog 1)
ruditapes2_c624	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import receptor subunit TOM40 homolog 1 (dtom40) (Male sterile protein 15) (Translocase of outer membrane 40 kDa subunit homolog 1)
ruditapes2_c624	protein transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog 1 (dtom40) (Male sterile protein 15) (Translocase of outer membrane 40 kDa subunit homolog 1)
ruditapes2_c624	transmembrane transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog 1 (dtom40) (Male sterile protein 15) (Translocase of outer membrane 40 kDa subunit homolog 1)
ruditapes2_c624	ion transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog 1 (dtom40) (Male sterile protein 15) (Translocase of outer membrane 40 kDa subunit homolog 1)
ruditapes2_c624	transport	transport	P	Mitochondrial import receptor subunit TOM40 homolog 1 (dtom40) (Male sterile protein 15) (Translocase of outer membrane 40 kDa subunit homolog 1)
ruditapes_s39779	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_s39779	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6365	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32195	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc39094	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6365	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32195	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4130	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4103	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6377	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5551	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30925	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc1551	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc10088	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc1551	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc1551	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4943	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4943	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6449	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_s40320	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc33003	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc39094	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_s39779	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4130	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6449	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30310	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30925	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30925	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6377	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4943	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_s40320	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4103	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4103	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc34048	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc33003	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc39094	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc10088	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc10088	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc39094	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc1551	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6377	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6377	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5927	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_s40320	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_s39779	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30925	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6449	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc34048	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4943	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc10088	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc33003	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc1551	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6449	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6449	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4103	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_s40320	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_s40320	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6377	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30310	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30310	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc34048	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4130	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5927	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32195	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc33003	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc33003	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc39094	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc39094	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30310	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc34048	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc34048	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5927	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_s39779	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6377	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4103	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30310	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5551	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5551	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5927	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5927	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5551	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc10088	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc10088	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_s39779	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32195	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6365	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6365	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4103	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30925	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30925	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5551	transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5927	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc34048	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6449	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32195	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc32195	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc33003	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4943	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc1551	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc5551	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4130	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4130	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_lrc30310	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4130	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc4943	proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6365	ATP synthesis coupled proton transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes2_lrc6365	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_s40320	ion transport	transport	P	"ATP synthase lipid-binding protein, mitochondrial (ATPase protein 9) (ATPase subunit c)"
ruditapes_c7102	ion transport	transport	P	Organic cation transporter 1 (CeOCT1)
ruditapes_c7102	transport	transport	P	Organic cation transporter 1 (CeOCT1)
ruditapes_c7102	organic cation transport	transport	P	Organic cation transporter 1 (CeOCT1)
ruditapes_c7102	transmembrane transport	transport	P	Organic cation transporter 1 (CeOCT1)
ruditapes_c5249	cell-cell adhesion	cell adhesion	P	Techylectin-5B
ruditapes_c5249	signal transduction	signal transduction	P	Techylectin-5B
ruditapes_c19345	cell-cell adhesion	cell adhesion	P	Techylectin-5A
ruditapes_c11337	cell-cell adhesion	cell adhesion	P	Techylectin-5A
ruditapes_c19345	signal transduction	signal transduction	P	Techylectin-5A
ruditapes_c11337	signal transduction	signal transduction	P	Techylectin-5A
ruditapes2_lrc4789	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_c24094	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc5255	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4789	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc5255	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc32619	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4816	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc38271	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc5255	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc5171	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc12867	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc33602	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4859	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc12867	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc33495	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc3330	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc34665	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc34665	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_c24094	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_c24094	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc38271	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc33495	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4643	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4859	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc3330	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc33602	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc33602	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_c2952	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4859	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc33495	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_c2952	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4643	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4136	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc3330	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc12867	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4862	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc34665	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4862	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4136	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4789	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc32403	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4816	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc3549	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc32619	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_c2952	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc3549	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc38271	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc5171	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4643	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4816	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4136	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc32619	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc4862	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc32403	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_lrc32403	lipid transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc5171	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes2_lrc3549	transport	transport	P	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]
ruditapes_c27191	mitosis	cell cycle and proliferation	P	Protein swallow
ruditapes_c27191	mitosis	cell organization and biogenesis	P	Protein swallow
ruditapes_c27191	cell division	other biological processes	P	Protein swallow
ruditapes_c27191	multicellular organismal development	developmental processes	P	Protein swallow
ruditapes_c27191	cell cycle	cell cycle and proliferation	P	Protein swallow
ruditapes_lrc37559	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_c6113	embryonic development	developmental processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	nematode larval development	developmental processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	polarity specification of proximal/distal axis	developmental processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	Wnt receptor signaling pathway	signal transduction	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	endoderm development	developmental processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	asymmetric cell division	other biological processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	phosphorylation	other metabolic processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	embryonic development ending in birth or egg hatching	developmental processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	endodermal cell fate specification	other biological processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	hermaphrodite genitalia development	developmental processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	multicellular organismal development	developmental processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	muscle cell fate specification	other biological processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	asymmetric protein localization involved in cell fate determination	other biological processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	mitotic spindle organization	cell cycle and proliferation	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	mitotic spindle organization	cell organization and biogenesis	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c6113	reproduction	other biological processes	P	Serine/threonine kinase NLK (EC 2.7.11.24) (Loss of intestine protein 1) (Nemo-like kinase)
ruditapes_c14118	transport	transport	P	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (hfCNT)
ruditapes_c1700	pathogenesis	other biological processes	P	Conotoxin AbVIK (Fragment)
ruditapes_lrc39167	pathogenesis	other biological processes	P	Conotoxin AbVIK (Fragment)
ruditapes_c10269	regulation of cell proliferation	cell cycle and proliferation	P	Methyl-CpG-binding domain protein 2 (Demethylase) (DMTase) (Methyl-CpG-binding protein MBD2)
ruditapes_c10269	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Methyl-CpG-binding domain protein 2 (Demethylase) (DMTase) (Methyl-CpG-binding protein MBD2)
ruditapes_c10269	positive regulation of Wnt receptor signaling pathway	signal transduction	P	Methyl-CpG-binding domain protein 2 (Demethylase) (DMTase) (Methyl-CpG-binding protein MBD2)
ruditapes_c10269	maternal behavior	other biological processes	P	Methyl-CpG-binding domain protein 2 (Demethylase) (DMTase) (Methyl-CpG-binding protein MBD2)
ruditapes_c10269	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Methyl-CpG-binding domain protein 2 (Demethylase) (DMTase) (Methyl-CpG-binding protein MBD2)
ruditapes_c10269	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Methyl-CpG-binding domain protein 2 (Demethylase) (DMTase) (Methyl-CpG-binding protein MBD2)
ruditapes_c10269	cellular protein complex assembly	cell organization and biogenesis	P	Methyl-CpG-binding domain protein 2 (Demethylase) (DMTase) (Methyl-CpG-binding protein MBD2)
ruditapes_c10269	"transcription, DNA-dependent"	RNA metabolism	P	Methyl-CpG-binding domain protein 2 (Demethylase) (DMTase) (Methyl-CpG-binding protein MBD2)
ruditapes_c24070	keratinization	developmental processes	P	Small proline-rich protein 3 (22 kDa pancornulin) (Cornifin beta) (Esophagin)
ruditapes_c24070	keratinocyte differentiation	other biological processes	P	Small proline-rich protein 3 (22 kDa pancornulin) (Cornifin beta) (Esophagin)
ruditapes_c24070	wound healing	stress response	P	Small proline-rich protein 3 (22 kDa pancornulin) (Cornifin beta) (Esophagin)
ruditapes_c24070	epidermis development	developmental processes	P	Small proline-rich protein 3 (22 kDa pancornulin) (Cornifin beta) (Esophagin)
ruditapes_c24070	peptide cross-linking	protein metabolism	P	Small proline-rich protein 3 (22 kDa pancornulin) (Cornifin beta) (Esophagin)
ruditapes_c11890	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c11890	transforming growth factor beta receptor signaling pathway	signal transduction	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c11890	Wnt receptor signaling pathway	signal transduction	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c11890	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c11890	peptidyl-threonine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c11890	protein kinase cascade	signal transduction	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c11890	serine phosphorylation of STAT3 protein	signal transduction	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c11890	serine phosphorylation of STAT3 protein	protein metabolism	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c11890	"transcription, DNA-dependent"	RNA metabolism	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c11890	protein amino acid autophosphorylation	protein metabolism	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c11890	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c11890	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)
ruditapes_c22149	transport	transport	P	ATP-binding cassette sub-family D member 2 (Adrenoleukodystrophy-like 1) (Adrenoleukodystrophy-related protein) (hALDR)
ruditapes_c22149	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family D member 2 (Adrenoleukodystrophy-like 1) (Adrenoleukodystrophy-related protein) (hALDR)
ruditapes_c22149	fatty acid metabolic process	other metabolic processes	P	ATP-binding cassette sub-family D member 2 (Adrenoleukodystrophy-like 1) (Adrenoleukodystrophy-related protein) (hALDR)
ruditapes_c22149	transmembrane transport	transport	P	ATP-binding cassette sub-family D member 2 (Adrenoleukodystrophy-like 1) (Adrenoleukodystrophy-related protein) (hALDR)
ruditapes_c25659	small GTPase mediated signal transduction	signal transduction	P	Rab-like protein 2A
ruditapes_c25659	GTP catabolic process	other metabolic processes	P	Rab-like protein 2A
ruditapes2_c327	translation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit K (eIF3k) (Eukaryotic translation initiation factor 3 subunit 12) (Muscle-specific gene M9 protein) (PLAC-24) (eIF-3 p25) (eIF-3 p28)
ruditapes2_c327	gene expression	other metabolic processes	P	Eukaryotic translation initiation factor 3 subunit K (eIF3k) (Eukaryotic translation initiation factor 3 subunit 12) (Muscle-specific gene M9 protein) (PLAC-24) (eIF-3 p25) (eIF-3 p28)
ruditapes2_c327	cellular protein metabolic process	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit K (eIF3k) (Eukaryotic translation initiation factor 3 subunit 12) (Muscle-specific gene M9 protein) (PLAC-24) (eIF-3 p25) (eIF-3 p28)
ruditapes2_c327	regulation of translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit K (eIF3k) (Eukaryotic translation initiation factor 3 subunit 12) (Muscle-specific gene M9 protein) (PLAC-24) (eIF-3 p25) (eIF-3 p28)
ruditapes2_c327	translational initiation	protein metabolism	P	Eukaryotic translation initiation factor 3 subunit K (eIF3k) (Eukaryotic translation initiation factor 3 subunit 12) (Muscle-specific gene M9 protein) (PLAC-24) (eIF-3 p25) (eIF-3 p28)
ruditapes_c25894	oxidation reduction	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c25099	cellular nitrogen compound metabolic process	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c25894	metabolic process	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c7712	excretion	transport	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c25099	glyoxylate metabolic process	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c25894	cellular nitrogen compound metabolic process	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c25099	metabolic process	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c25099	oxidation reduction	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c25894	glyoxylate metabolic process	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c7712	oxidation reduction	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c7712	glyoxylate metabolic process	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c7712	metabolic process	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c7712	cellular nitrogen compound metabolic process	other metabolic processes	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c25099	excretion	transport	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_c25894	excretion	transport	P	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)
ruditapes_s33922	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	E3 ubiquitin-protein ligase RNF14 (EC 6.3.2.-) (Androgen receptor-associated protein 54) (HFB30) (RING finger protein 14) (Triad2 protein)
ruditapes_s33922	androgen receptor signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase RNF14 (EC 6.3.2.-) (Androgen receptor-associated protein 54) (HFB30) (RING finger protein 14) (Triad2 protein)
ruditapes_s33922	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase RNF14 (EC 6.3.2.-) (Androgen receptor-associated protein 54) (HFB30) (RING finger protein 14) (Triad2 protein)
ruditapes_s33922	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase RNF14 (EC 6.3.2.-) (Androgen receptor-associated protein 54) (HFB30) (RING finger protein 14) (Triad2 protein)
ruditapes_s33922	signal transduction	signal transduction	P	E3 ubiquitin-protein ligase RNF14 (EC 6.3.2.-) (Androgen receptor-associated protein 54) (HFB30) (RING finger protein 14) (Triad2 protein)
ruditapes_s33922	response to estradiol stimulus	other biological processes	P	E3 ubiquitin-protein ligase RNF14 (EC 6.3.2.-) (Androgen receptor-associated protein 54) (HFB30) (RING finger protein 14) (Triad2 protein)
ruditapes_s33922	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase RNF14 (EC 6.3.2.-) (Androgen receptor-associated protein 54) (HFB30) (RING finger protein 14) (Triad2 protein)
ruditapes_s33922	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase RNF14 (EC 6.3.2.-) (Androgen receptor-associated protein 54) (HFB30) (RING finger protein 14) (Triad2 protein)
ruditapes_c12696	response to DNA damage stimulus	stress response	P	DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)
ruditapes_c12696	DNA replication	DNA metabolism	P	DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)
ruditapes_c12696	DNA repair	stress response	P	DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)
ruditapes_c12696	DNA repair	DNA metabolism	P	DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)
ruditapes_c12696	"nucleotide-excision repair, DNA gap filling"	stress response	P	DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)
ruditapes_c12696	"nucleotide-excision repair, DNA gap filling"	DNA metabolism	P	DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)
ruditapes_c17223	positive regulation of interleukin-2 production	other biological processes	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	activation of NF-kappaB-inducing kinase activity	signal transduction	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	T cell receptor signaling pathway	signal transduction	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	positive regulation of T cell activation	other biological processes	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	positive regulation of protein ubiquitination	protein metabolism	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	anti-apoptosis	death	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	positive regulation of phosphorylation	other metabolic processes	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	proteolysis	protein metabolism	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	positive regulation of T cell cytokine production	other biological processes	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	regulation of apoptosis	death	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	nuclear export	transport	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	defense response	stress response	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	protein oligomerization	cell organization and biogenesis	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c17223	protein ubiquitination	protein metabolism	P	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-) (MALT lymphoma-associated translocation) (Paracaspase)
ruditapes_c14886	rRNA processing	RNA metabolism	P	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase (EC 2.1.1.205) (2'-O-ribose RNA methyltransferase TRM7 homolog) (Protein ftsJ homolog 1)
ruditapes_c14886	RNA methylation	RNA metabolism	P	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase (EC 2.1.1.205) (2'-O-ribose RNA methyltransferase TRM7 homolog) (Protein ftsJ homolog 1)
ruditapes_c14886	methylation	other metabolic processes	P	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase (EC 2.1.1.205) (2'-O-ribose RNA methyltransferase TRM7 homolog) (Protein ftsJ homolog 1)
ruditapes_c27614	innate immune response	stress response	P	Macrophage receptor MARCO (Macrophage receptor with collagenous structure) (Scavenger receptor class A member 2)
ruditapes_c27614	cell surface receptor linked signal transduction	signal transduction	P	Macrophage receptor MARCO (Macrophage receptor with collagenous structure) (Scavenger receptor class A member 2)
ruditapes_c10920	pattern recognition receptor signaling pathway	signal transduction	P	Macrophage receptor MARCO (Macrophage receptor with collagenous structure) (Scavenger receptor class A member 2)
ruditapes_c10920	pattern recognition receptor signaling pathway	stress response	P	Macrophage receptor MARCO (Macrophage receptor with collagenous structure) (Scavenger receptor class A member 2)
ruditapes_c10920	innate immune response	stress response	P	Macrophage receptor MARCO (Macrophage receptor with collagenous structure) (Scavenger receptor class A member 2)
ruditapes_c27614	pattern recognition receptor signaling pathway	signal transduction	P	Macrophage receptor MARCO (Macrophage receptor with collagenous structure) (Scavenger receptor class A member 2)
ruditapes_c27614	pattern recognition receptor signaling pathway	stress response	P	Macrophage receptor MARCO (Macrophage receptor with collagenous structure) (Scavenger receptor class A member 2)
ruditapes_c10920	cell surface receptor linked signal transduction	signal transduction	P	Macrophage receptor MARCO (Macrophage receptor with collagenous structure) (Scavenger receptor class A member 2)
ruditapes_c29044	phosphorylation	other metabolic processes	P	STE20/SPS1-related proline-alanine-rich protein kinase (Ste-20-related kinase) (EC 2.7.11.1) (DCHT) (Serine/threonine-protein kinase 39)
ruditapes_c29044	protein amino acid phosphorylation	protein metabolism	P	STE20/SPS1-related proline-alanine-rich protein kinase (Ste-20-related kinase) (EC 2.7.11.1) (DCHT) (Serine/threonine-protein kinase 39)
ruditapes_c29044	response to stress	stress response	P	STE20/SPS1-related proline-alanine-rich protein kinase (Ste-20-related kinase) (EC 2.7.11.1) (DCHT) (Serine/threonine-protein kinase 39)
ruditapes_c29044	positive regulation of potassium ion transport	transport	P	STE20/SPS1-related proline-alanine-rich protein kinase (Ste-20-related kinase) (EC 2.7.11.1) (DCHT) (Serine/threonine-protein kinase 39)
ruditapes_c18829	sodium ion transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c18829	L-ascorbic acid metabolic process	other metabolic processes	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c18829	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c18829	transmembrane transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c18829	water-soluble vitamin metabolic process	other metabolic processes	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c18829	nucleobase transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c18829	response to oxidative stress	stress response	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c18829	vitamin metabolic process	other metabolic processes	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c18829	L-ascorbic acid transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c18829	transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c18829	ion transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c18829	molecular hydrogen transport	transport	P	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Nucleobase transporter-like 1 protein) (Sodium-dependent vitamin C transporter 2) (hSVCT2) (Yolk sac permease-like molecule 2)
ruditapes_c8377	protein complex assembly	cell organization and biogenesis	P	Gamma-tubulin complex component 4 (GCP-4) (hGCP4) (Gamma-ring complex protein 76 kDa) (h76p) (hGrip76)
ruditapes_c8377	microtubule nucleation	cell organization and biogenesis	P	Gamma-tubulin complex component 4 (GCP-4) (hGCP4) (Gamma-ring complex protein 76 kDa) (h76p) (hGrip76)
ruditapes_c8377	G2/M transition of mitotic cell cycle	cell cycle and proliferation	P	Gamma-tubulin complex component 4 (GCP-4) (hGCP4) (Gamma-ring complex protein 76 kDa) (h76p) (hGrip76)
ruditapes_c8377	microtubule cytoskeleton organization	cell organization and biogenesis	P	Gamma-tubulin complex component 4 (GCP-4) (hGCP4) (Gamma-ring complex protein 76 kDa) (h76p) (hGrip76)
ruditapes_c8377	mitotic cell cycle	cell cycle and proliferation	P	Gamma-tubulin complex component 4 (GCP-4) (hGCP4) (Gamma-ring complex protein 76 kDa) (h76p) (hGrip76)
ruditapes_c30574	interspecies interaction between organisms	other biological processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	multicellular organismal development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	response to organic substance	other biological processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	pattern recognition receptor signaling pathway	signal transduction	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	pattern recognition receptor signaling pathway	stress response	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	transport	transport	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	protein transport	transport	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	cell differentiation	other biological processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	inner cell mass cell proliferation	cell cycle and proliferation	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	inner cell mass cell proliferation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	transport	transport	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	innate immune response	stress response	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	tissue regeneration	stress response	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	tissue regeneration	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	response to organic substance	other biological processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	cell differentiation	other biological processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	pattern recognition receptor signaling pathway	signal transduction	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	pattern recognition receptor signaling pathway	stress response	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	response to wounding	stress response	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	epithelial cell differentiation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	induction of bacterial agglutination	stress response	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	response to virus	other biological processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	protein transport	transport	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	innate immune response	stress response	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	inner cell mass cell proliferation	cell cycle and proliferation	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	inner cell mass cell proliferation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	response to virus	other biological processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	response to estrogen stimulus	other biological processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	blastocyst development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	positive regulation of epithelial cell differentiation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	positive regulation of epithelial cell differentiation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	response to estrogen stimulus	other biological processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	interspecies interaction between organisms	other biological processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	response to wounding	stress response	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	blastocyst development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	tissue regeneration	stress response	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	tissue regeneration	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	epithelial cell differentiation	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c30574	multicellular organismal development	developmental processes	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes_c3014	induction of bacterial agglutination	stress response	P	Deleted in malignant brain tumors 1 protein (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)
ruditapes2_lrc6756	rhythmic process	other biological processes	P	SRR1-like protein (SRR1 domain-containing protein)
ruditapes2_c1369	somatic cell DNA recombination	DNA metabolism	P	Switch-associated protein 70 (SWAP-70)
ruditapes2_c1369	isotype switching	developmental processes	P	Switch-associated protein 70 (SWAP-70)
ruditapes2_c1369	isotype switching	DNA metabolism	P	Switch-associated protein 70 (SWAP-70)
ruditapes_c25138	positive regulation of cellular metabolic process	other metabolic processes	P	Max-like protein X (Class D basic helix-loop-helix protein 13) (bHLHd13) (Max-like bHLHZip protein) (Protein BigMax) (Transcription factor-like protein 4)
ruditapes_c25138	"transcription, DNA-dependent"	RNA metabolism	P	Max-like protein X (Class D basic helix-loop-helix protein 13) (bHLHd13) (Max-like bHLHZip protein) (Protein BigMax) (Transcription factor-like protein 4)
ruditapes_c25138	energy reserve metabolic process	other metabolic processes	P	Max-like protein X (Class D basic helix-loop-helix protein 13) (bHLHd13) (Max-like bHLHZip protein) (Protein BigMax) (Transcription factor-like protein 4)
ruditapes_c25138	nucleocytoplasmic transport	transport	P	Max-like protein X (Class D basic helix-loop-helix protein 13) (bHLHd13) (Max-like bHLHZip protein) (Protein BigMax) (Transcription factor-like protein 4)
ruditapes_c25138	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Max-like protein X (Class D basic helix-loop-helix protein 13) (bHLHd13) (Max-like bHLHZip protein) (Protein BigMax) (Transcription factor-like protein 4)
ruditapes_c25138	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Max-like protein X (Class D basic helix-loop-helix protein 13) (bHLHd13) (Max-like bHLHZip protein) (Protein BigMax) (Transcription factor-like protein 4)
ruditapes_c16657	cellular protein localization	other biological processes	P	Ragulator complex protein LAMTOR3 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 3) (MEK-binding partner 1) (Mp1) (Mitogen-activated protein kinase kinase 1-interacting protein 1) (Mitogen-activated protein kinase scaffold protein 1)
ruditapes_c16657	positive regulation of TOR signaling pathway	signal transduction	P	Ragulator complex protein LAMTOR3 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 3) (MEK-binding partner 1) (Mp1) (Mitogen-activated protein kinase kinase 1-interacting protein 1) (Mitogen-activated protein kinase scaffold protein 1)
ruditapes_c20267	sterol transport	transport	P	Niemann-Pick C1-like protein 1
ruditapes_c20267	cholesterol transport	transport	P	Niemann-Pick C1-like protein 1
ruditapes_c20267	steroid metabolic process	other metabolic processes	P	Niemann-Pick C1-like protein 1
ruditapes_c20267	lipoprotein metabolic process	other metabolic processes	P	Niemann-Pick C1-like protein 1
ruditapes_c20267	intestinal cholesterol absorption	transport	P	Niemann-Pick C1-like protein 1
ruditapes_c20267	lipid metabolic process	other metabolic processes	P	Niemann-Pick C1-like protein 1
ruditapes_c20267	cholesterol metabolic process	other metabolic processes	P	Niemann-Pick C1-like protein 1
ruditapes_c20267	cholesterol biosynthetic process	other metabolic processes	P	Niemann-Pick C1-like protein 1
ruditapes_c26515	blood vessel development	developmental processes	P	Epidermal growth factor-like protein 7 (EGF-like protein 7) (Multiple epidermal growth factor-like domains protein 7) (Multiple EGF-like domains protein 7) (NOTCH4-like protein) (Vascular endothelial statin) (VE-statin) (Zneu1)
ruditapes_c26515	vasculogenesis	developmental processes	P	Epidermal growth factor-like protein 7 (EGF-like protein 7) (Multiple epidermal growth factor-like domains protein 7) (Multiple EGF-like domains protein 7) (NOTCH4-like protein) (Vascular endothelial statin) (VE-statin) (Zneu1)
ruditapes_c26515	angiogenesis	developmental processes	P	Epidermal growth factor-like protein 7 (EGF-like protein 7) (Multiple epidermal growth factor-like domains protein 7) (Multiple EGF-like domains protein 7) (NOTCH4-like protein) (Vascular endothelial statin) (VE-statin) (Zneu1)
ruditapes_c26515	negative regulation of cell migration	other biological processes	P	Epidermal growth factor-like protein 7 (EGF-like protein 7) (Multiple epidermal growth factor-like domains protein 7) (Multiple EGF-like domains protein 7) (NOTCH4-like protein) (Vascular endothelial statin) (VE-statin) (Zneu1)
ruditapes_c26515	multicellular organismal development	developmental processes	P	Epidermal growth factor-like protein 7 (EGF-like protein 7) (Multiple epidermal growth factor-like domains protein 7) (Multiple EGF-like domains protein 7) (NOTCH4-like protein) (Vascular endothelial statin) (VE-statin) (Zneu1)
ruditapes_c26515	cell differentiation	other biological processes	P	Epidermal growth factor-like protein 7 (EGF-like protein 7) (Multiple epidermal growth factor-like domains protein 7) (Multiple EGF-like domains protein 7) (NOTCH4-like protein) (Vascular endothelial statin) (VE-statin) (Zneu1)
ruditapes_c12066	cell-cell signaling	cell-cell signaling	P	Interleukin-17B (IL-17B) (Cytokine Zcyto7) (Interleukin-20) (IL-20) (Neuronal interleukin-17-related factor)
ruditapes_c12066	inflammatory response	stress response	P	Interleukin-17B (IL-17B) (Cytokine Zcyto7) (Interleukin-20) (IL-20) (Neuronal interleukin-17-related factor)
ruditapes_c12066	immune response	other biological processes	P	Interleukin-17B (IL-17B) (Cytokine Zcyto7) (Interleukin-20) (IL-20) (Neuronal interleukin-17-related factor)
ruditapes_c20247	sodium ion transport	transport	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c20247	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c20247	transport	transport	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c20247	brain development	developmental processes	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c20247	nucleobase transport	transport	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c20247	L-ascorbic acid transport	transport	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c20247	water-soluble vitamin metabolic process	other metabolic processes	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c20247	L-ascorbic acid metabolic process	other metabolic processes	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c20247	transmembrane transport	transport	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c20247	vitamin metabolic process	other metabolic processes	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c20247	response to toxin	other biological processes	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c20247	ion transport	transport	P	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (hSVCT1) (Yolk sac permease-like molecule 3)
ruditapes_c11954	biological_process	other biological processes	P	Rhabdoid tumor deletion region protein 1
ruditapes_c28256	biological_process	other biological processes	P	Rhabdoid tumor deletion region protein 1
ruditapes_c8894	"regulation of transcription, DNA-dependent"	RNA metabolism	P	SAP30-binding protein (Transcriptional regulator protein HCNGP)
ruditapes_c8894	induction of apoptosis	death	P	SAP30-binding protein (Transcriptional regulator protein HCNGP)
ruditapes_c8894	apoptosis	death	P	SAP30-binding protein (Transcriptional regulator protein HCNGP)
ruditapes_c8894	"transcription, DNA-dependent"	RNA metabolism	P	SAP30-binding protein (Transcriptional regulator protein HCNGP)
ruditapes_c9492	protein folding	protein metabolism	P	Prefoldin subunit 2
ruditapes2_c315	cellular protein metabolic process	protein metabolism	P	Prefoldin subunit 2
ruditapes2_c315	'de novo' posttranslational protein folding	protein metabolism	P	Prefoldin subunit 2
ruditapes2_c315	protein folding	protein metabolism	P	Prefoldin subunit 2
ruditapes_c9492	'de novo' posttranslational protein folding	protein metabolism	P	Prefoldin subunit 2
ruditapes_c9492	cellular protein metabolic process	protein metabolism	P	Prefoldin subunit 2
ruditapes_c4097	organelle organization	cell organization and biogenesis	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_c4097	mitotic sister chromatid segregation	cell organization and biogenesis	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_lrc21823	microtubule-based movement	other biological processes	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_c4097	microtubule-based movement	other biological processes	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_lrc15418	organelle organization	cell organization and biogenesis	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_c4097	mitotic sister chromatid segregation	cell cycle and proliferation	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_lrc21823	organelle organization	cell organization and biogenesis	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_lrc15418	microtubule-based movement	other biological processes	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_lrc15418	mitotic sister chromatid segregation	cell cycle and proliferation	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_lrc15418	mitotic sister chromatid segregation	cell organization and biogenesis	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_lrc21823	mitotic sister chromatid segregation	cell cycle and proliferation	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_lrc21823	mitotic sister chromatid segregation	cell organization and biogenesis	P	Kinesin-like protein KIF25 (Kinesin-like protein 3)
ruditapes_c7028	transport	transport	P	Rab5 GDP/GTP exchange factor (RAP1) (Rabaptin-5-associated exchange factor for Rab5) (Rabex-5)
ruditapes_c7028	protein transport	transport	P	Rab5 GDP/GTP exchange factor (RAP1) (Rabaptin-5-associated exchange factor for Rab5) (Rabex-5)
ruditapes_c7028	endocytosis	transport	P	Rab5 GDP/GTP exchange factor (RAP1) (Rabaptin-5-associated exchange factor for Rab5) (Rabex-5)
ruditapes_c7028	endocytosis	cell organization and biogenesis	P	Rab5 GDP/GTP exchange factor (RAP1) (Rabaptin-5-associated exchange factor for Rab5) (Rabex-5)
ruditapes_c12262	signal transduction	signal transduction	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-8 (Gamma-9)
ruditapes_c12262	GTP catabolic process	other metabolic processes	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-8 (Gamma-9)
ruditapes_c12262	G-protein coupled receptor protein signaling pathway	signal transduction	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-8 (Gamma-9)
ruditapes_c12262	energy reserve metabolic process	other metabolic processes	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-8 (Gamma-9)
ruditapes_c12262	nervous system development	developmental processes	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-8 (Gamma-9)
ruditapes_c12262	synaptic transmission	cell-cell signaling	P	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-8 (Gamma-9)
ruditapes_c11624	fatty acid beta-oxidation using acyl-CoA oxidase	other metabolic processes	P	Peroxisomal carnitine O-octanoyltransferase (COT) (EC 2.3.1.137)
ruditapes_c11624	transport	transport	P	Peroxisomal carnitine O-octanoyltransferase (COT) (EC 2.3.1.137)
ruditapes_c11624	cellular lipid metabolic process	other metabolic processes	P	Peroxisomal carnitine O-octanoyltransferase (COT) (EC 2.3.1.137)
ruditapes_c11624	lipid metabolic process	other metabolic processes	P	Peroxisomal carnitine O-octanoyltransferase (COT) (EC 2.3.1.137)
ruditapes_c11624	fatty acid metabolic process	other metabolic processes	P	Peroxisomal carnitine O-octanoyltransferase (COT) (EC 2.3.1.137)
ruditapes_c8443	response to DNA damage stimulus	stress response	P	Serine/threonine-protein kinase tousled-like 1 (EC 2.7.11.1) (PKU-beta) (Tousled-like kinase 1)
ruditapes_c8443	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase tousled-like 1 (EC 2.7.11.1) (PKU-beta) (Tousled-like kinase 1)
ruditapes_c8443	cell cycle	cell cycle and proliferation	P	Serine/threonine-protein kinase tousled-like 1 (EC 2.7.11.1) (PKU-beta) (Tousled-like kinase 1)
ruditapes_c8443	intracellular protein transport	transport	P	Serine/threonine-protein kinase tousled-like 1 (EC 2.7.11.1) (PKU-beta) (Tousled-like kinase 1)
ruditapes_c8443	chromatin modification	cell organization and biogenesis	P	Serine/threonine-protein kinase tousled-like 1 (EC 2.7.11.1) (PKU-beta) (Tousled-like kinase 1)
ruditapes_c8443	regulation of chromatin assembly or disassembly	cell organization and biogenesis	P	Serine/threonine-protein kinase tousled-like 1 (EC 2.7.11.1) (PKU-beta) (Tousled-like kinase 1)
ruditapes_c8443	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase tousled-like 1 (EC 2.7.11.1) (PKU-beta) (Tousled-like kinase 1)
ruditapes_c10202	single fertilization	other biological processes	P	Disintegrin and metalloproteinase domain-containing protein 21 (ADAM 21) (EC 3.4.24.-)
ruditapes_c10202	proteolysis	protein metabolism	P	Disintegrin and metalloproteinase domain-containing protein 21 (ADAM 21) (EC 3.4.24.-)
ruditapes_c15733	sensory perception of sound	other biological processes	P	Unconventional myosin-XV (Unconventional myosin-15)
ruditapes_c15733	locomotory behavior	other biological processes	P	Unconventional myosin-XV (Unconventional myosin-15)
ruditapes_c15733	inner ear morphogenesis	developmental processes	P	Unconventional myosin-XV (Unconventional myosin-15)
ruditapes_c12278	regulation of transcription of G1/S-phase of mitotic cell cycle	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	regulation of transcription of G1/S-phase of mitotic cell cycle	RNA metabolism	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	vesicle organization	cell organization and biogenesis	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	cell division	other biological processes	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	spindle assembly	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	spindle assembly	cell organization and biogenesis	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	mitosis	cell organization and biogenesis	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	oocyte maturation	other biological processes	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	regulation of mitotic cell cycle	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	mitotic metaphase/anaphase transition	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	mitotic metaphase/anaphase transition	cell organization and biogenesis	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	M phase of mitotic cell cycle	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	microtubule polymerization	cell organization and biogenesis	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	mitosis	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	spindle assembly involved in female meiosis I	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	spindle assembly involved in female meiosis I	cell organization and biogenesis	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	regulation of meiosis	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	mitotic cell cycle	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	cell cycle	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	mitotic metaphase	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	mitotic metaphase	cell organization and biogenesis	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	inhibition of anaphase-promoting complex activity during mitotic cell cycle	cell cycle and proliferation	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	inhibition of anaphase-promoting complex activity during mitotic cell cycle	protein metabolism	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c12278	inhibition of anaphase-promoting complex activity during mitotic cell cycle	cell organization and biogenesis	P	F-box only protein 5 (Early mitotic inhibitor 1)
ruditapes_c2372	acyl-CoA metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6)
ruditapes_c2372	cellular lipid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6)
ruditapes_c2372	lipid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6)
ruditapes_c2372	fatty acid metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6)
ruditapes_c2372	triglyceride biosynthetic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6)
ruditapes_c2372	neuroblast proliferation	cell cycle and proliferation	P	Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6)
ruditapes_c2372	neuroblast proliferation	developmental processes	P	Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6)
ruditapes_c2372	metabolic process	other metabolic processes	P	Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 6) (LACS 6)
ruditapes_c18494	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c23811	cellular nitrogen compound metabolic process	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c18494	"transcription, DNA-dependent"	RNA metabolism	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c23811	lipid metabolic process	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c18494	cellular nitrogen compound metabolic process	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c18494	oxidation reduction	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c23811	metabolic process	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c23811	"transcription, DNA-dependent"	RNA metabolism	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c23811	oxidation reduction	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c23811	branched chain family amino acid catabolic process	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c18494	metabolic process	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c18494	lipid metabolic process	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c23811	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_c18494	branched chain family amino acid catabolic process	other metabolic processes	P	"Isobutyryl-CoA dehydrogenase, mitochondrial (EC 1.3.99.-) (Activator-recruited cofactor 42 kDa component) (ARC42) (Acyl-CoA dehydrogenase family member 8) (ACAD-8)"
ruditapes_lrc34748	multicellular organismal development	developmental processes	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_lrc34084	multicellular organismal development	developmental processes	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_lrc32148	multicellular organismal development	developmental processes	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_c8572	multicellular organismal development	developmental processes	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_lrc32148	signal transduction	signal transduction	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_lrc34748	signal transduction	signal transduction	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_lrc35970	multicellular organismal development	developmental processes	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_c28017	signal transduction	signal transduction	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_c28017	multicellular organismal development	developmental processes	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_c8572	signal transduction	signal transduction	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_lrc35970	signal transduction	signal transduction	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_lrc34084	signal transduction	signal transduction	P	Angiopoietin-related protein 2 (Angiopoietin-like protein 2)
ruditapes_c13849	endoplasmic reticulum unfolded protein response	signal transduction	P	E3 ubiquitin-protein ligase AMFR (EC 6.3.2.-) (Autocrine motility factor receptor) (AMF receptor) (RING finger protein 45) (gp78)
ruditapes_c13849	endoplasmic reticulum unfolded protein response	stress response	P	E3 ubiquitin-protein ligase AMFR (EC 6.3.2.-) (Autocrine motility factor receptor) (AMF receptor) (RING finger protein 45) (gp78)
ruditapes_c13849	aging	other biological processes	P	E3 ubiquitin-protein ligase AMFR (EC 6.3.2.-) (Autocrine motility factor receptor) (AMF receptor) (RING finger protein 45) (gp78)
ruditapes_c13849	ER-associated protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase AMFR (EC 6.3.2.-) (Autocrine motility factor receptor) (AMF receptor) (RING finger protein 45) (gp78)
ruditapes_c13849	protein oligomerization	cell organization and biogenesis	P	E3 ubiquitin-protein ligase AMFR (EC 6.3.2.-) (Autocrine motility factor receptor) (AMF receptor) (RING finger protein 45) (gp78)
ruditapes_c13849	ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase AMFR (EC 6.3.2.-) (Autocrine motility factor receptor) (AMF receptor) (RING finger protein 45) (gp78)
ruditapes_c13849	protein polyubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase AMFR (EC 6.3.2.-) (Autocrine motility factor receptor) (AMF receptor) (RING finger protein 45) (gp78)
ruditapes_c13849	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase AMFR (EC 6.3.2.-) (Autocrine motility factor receptor) (AMF receptor) (RING finger protein 45) (gp78)
ruditapes_c13849	learning or memory	other biological processes	P	E3 ubiquitin-protein ligase AMFR (EC 6.3.2.-) (Autocrine motility factor receptor) (AMF receptor) (RING finger protein 45) (gp78)
ruditapes_c21140	induction of apoptosis by extracellular signals	death	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	B cell receptor signaling pathway	signal transduction	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	regulation of catalytic activity	other biological processes	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	regulation of GTPase activity	other biological processes	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	regulation of small GTPase mediated signal transduction	signal transduction	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	positive regulation of cell adhesion	cell adhesion	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	positive regulation of B cell proliferation	cell cycle and proliferation	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	blood coagulation	stress response	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	integrin-mediated signaling pathway	signal transduction	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	apoptosis	death	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	cell migration	other biological processes	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	nerve growth factor receptor signaling pathway	signal transduction	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	vesicle fusion	transport	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	vesicle fusion	cell organization and biogenesis	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	regulation of Rho protein signal transduction	signal transduction	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	positive regulation of GTPase activity	other biological processes	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	lamellipodium assembly	cell organization and biogenesis	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	response to drug	other biological processes	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	response to DNA damage stimulus	stress response	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	small GTPase mediated signal transduction	signal transduction	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	angiogenesis	developmental processes	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	cell projection assembly	cell organization and biogenesis	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	platelet activation	stress response	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes_c21140	positive regulation of phosphoinositide 3-kinase activity	other metabolic processes	P	Guanine nucleotide exchange factor VAV3 (VAV-3)
ruditapes2_c2409	negative regulation of cell proliferation	cell cycle and proliferation	P	Retinoic acid receptor responder protein 3 (EC 3.1.1.-) (HRAS-like suppressor 4) (HRSL4) (RAR-responsive protein TIG3) (Retinoid-inducible gene 1 protein) (Tazarotene-induced gene 3 protein)
ruditapes2_c2409	lipid catabolic process	other metabolic processes	P	Retinoic acid receptor responder protein 3 (EC 3.1.1.-) (HRAS-like suppressor 4) (HRSL4) (RAR-responsive protein TIG3) (Retinoid-inducible gene 1 protein) (Tazarotene-induced gene 3 protein)
ruditapes2_c2409	phospholipid metabolic process	other metabolic processes	P	Retinoic acid receptor responder protein 3 (EC 3.1.1.-) (HRAS-like suppressor 4) (HRSL4) (RAR-responsive protein TIG3) (Retinoid-inducible gene 1 protein) (Tazarotene-induced gene 3 protein)
ruditapes_c12883	positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	cell cycle checkpoint	cell cycle and proliferation	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	protein polyubiquitination	protein metabolism	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	mitotic cell cycle	cell cycle and proliferation	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	gene expression	other metabolic processes	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	mRNA metabolic process	RNA metabolism	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	apoptosis	death	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	regulation of apoptosis	death	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	M/G1 transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	cellular nitrogen compound metabolic process	other metabolic processes	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	regulation of amino acid metabolic process	other metabolic processes	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent"	other biological processes	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	RNA metabolic process	RNA metabolism	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	viral reproduction	other biological processes	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes_c12883	S phase of mitotic cell cycle	cell cycle and proliferation	P	Proteasome activator complex subunit 2 (11S regulator complex subunit beta) (REG-beta) (Activator of multicatalytic protease subunit 2) (Proteasome activator 28 subunit beta) (PA28b) (PA28beta)
ruditapes2_c2094	viral reproduction	other biological processes	P	Zinc finger protein 215 (BWSCR2-associated zinc finger protein 2) (BAZ-2) (Zinc finger protein with KRAB and SCAN domains 11)
ruditapes2_c2094	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 215 (BWSCR2-associated zinc finger protein 2) (BAZ-2) (Zinc finger protein with KRAB and SCAN domains 11)
ruditapes2_c2094	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 215 (BWSCR2-associated zinc finger protein 2) (BAZ-2) (Zinc finger protein with KRAB and SCAN domains 11)
ruditapes_c21509	ion transport	transport	P	Potassium voltage-gated channel subfamily H member 3 (Brain-specific eag-like channel 1) (BEC1) (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Voltage-gated potassium channel subunit Kv12.2)
ruditapes_c21509	regulation of transmembrane ion transport	transport	P	Potassium voltage-gated channel subfamily H member 3 (Brain-specific eag-like channel 1) (BEC1) (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Voltage-gated potassium channel subunit Kv12.2)
ruditapes_c21509	transport	transport	P	Potassium voltage-gated channel subfamily H member 3 (Brain-specific eag-like channel 1) (BEC1) (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Voltage-gated potassium channel subunit Kv12.2)
ruditapes_c21509	two-component signal transduction system (phosphorelay)	signal transduction	P	Potassium voltage-gated channel subfamily H member 3 (Brain-specific eag-like channel 1) (BEC1) (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Voltage-gated potassium channel subunit Kv12.2)
ruditapes_c21509	potassium ion transport	transport	P	Potassium voltage-gated channel subfamily H member 3 (Brain-specific eag-like channel 1) (BEC1) (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Voltage-gated potassium channel subunit Kv12.2)
ruditapes_c21509	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Potassium voltage-gated channel subfamily H member 3 (Brain-specific eag-like channel 1) (BEC1) (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Voltage-gated potassium channel subunit Kv12.2)
ruditapes_c21509	signal transduction	signal transduction	P	Potassium voltage-gated channel subfamily H member 3 (Brain-specific eag-like channel 1) (BEC1) (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Voltage-gated potassium channel subunit Kv12.2)
ruditapes_c21509	transmembrane transport	transport	P	Potassium voltage-gated channel subfamily H member 3 (Brain-specific eag-like channel 1) (BEC1) (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Voltage-gated potassium channel subunit Kv12.2)
ruditapes_c21509	synaptic transmission	cell-cell signaling	P	Potassium voltage-gated channel subfamily H member 3 (Brain-specific eag-like channel 1) (BEC1) (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Voltage-gated potassium channel subunit Kv12.2)
ruditapes_c18771	regulation of ARF GTPase activity	signal transduction	P	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 (130 kDa phosphatidylinositol 4,5-bisphosphate-dependent ARF1 GTPase-activating protein) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differentiation-enhancing factor 1) (DEF-1) (Differentiation-enhancing factor 1) (PIP2-dependent ARF1 GAP)"
ruditapes_c18771	positive regulation of GTPase activity	other biological processes	P	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 (130 kDa phosphatidylinositol 4,5-bisphosphate-dependent ARF1 GTPase-activating protein) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differentiation-enhancing factor 1) (DEF-1) (Differentiation-enhancing factor 1) (PIP2-dependent ARF1 GAP)"
ruditapes_c18771	filopodium assembly	cell organization and biogenesis	P	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 (130 kDa phosphatidylinositol 4,5-bisphosphate-dependent ARF1 GTPase-activating protein) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differentiation-enhancing factor 1) (DEF-1) (Differentiation-enhancing factor 1) (PIP2-dependent ARF1 GAP)"
ruditapes_c18771	cilium morphogenesis	cell organization and biogenesis	P	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 (130 kDa phosphatidylinositol 4,5-bisphosphate-dependent ARF1 GTPase-activating protein) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differentiation-enhancing factor 1) (DEF-1) (Differentiation-enhancing factor 1) (PIP2-dependent ARF1 GAP)"
ruditapes_c18771	signal transduction	signal transduction	P	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 (130 kDa phosphatidylinositol 4,5-bisphosphate-dependent ARF1 GTPase-activating protein) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differentiation-enhancing factor 1) (DEF-1) (Differentiation-enhancing factor 1) (PIP2-dependent ARF1 GAP)"
ruditapes_c18771	cell projection organization	cell organization and biogenesis	P	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 (130 kDa phosphatidylinositol 4,5-bisphosphate-dependent ARF1 GTPase-activating protein) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differentiation-enhancing factor 1) (DEF-1) (Differentiation-enhancing factor 1) (PIP2-dependent ARF1 GAP)"
ruditapes_c551	post-embryonic development	developmental processes	P	Protein HEG homolog 1
ruditapes_c551	endothelial cell morphogenesis	cell organization and biogenesis	P	Protein HEG homolog 1
ruditapes_c551	regulation of body fluid levels	other biological processes	P	Protein HEG homolog 1
ruditapes_c551	lung development	developmental processes	P	Protein HEG homolog 1
ruditapes_c551	cell-cell junction organization	cell organization and biogenesis	P	Protein HEG homolog 1
ruditapes_c551	lymph circulation	other biological processes	P	Protein HEG homolog 1
ruditapes_c551	vasculogenesis	developmental processes	P	Protein HEG homolog 1
ruditapes_c551	in utero embryonic development	developmental processes	P	Protein HEG homolog 1
ruditapes_c551	multicellular organismal development	developmental processes	P	Protein HEG homolog 1
ruditapes_c551	venous blood vessel morphogenesis	developmental processes	P	Protein HEG homolog 1
ruditapes_c551	vasculature development	developmental processes	P	Protein HEG homolog 1
ruditapes_c551	heart development	developmental processes	P	Protein HEG homolog 1
ruditapes_c551	pericardium development	developmental processes	P	Protein HEG homolog 1
ruditapes_c551	multicellular organism growth	other biological processes	P	Protein HEG homolog 1
ruditapes_c551	endothelial cell development	other biological processes	P	Protein HEG homolog 1
ruditapes_c551	lymph vessel development	developmental processes	P	Protein HEG homolog 1
ruditapes_c2493	cognition	other biological processes	P	Protein Shroom4 (Second homolog of apical protein)
ruditapes_c2493	actin filament organization	cell organization and biogenesis	P	Protein Shroom4 (Second homolog of apical protein)
ruditapes_c2493	actin cytoskeleton organization	cell organization and biogenesis	P	Protein Shroom4 (Second homolog of apical protein)
ruditapes_c2493	cell morphogenesis	cell organization and biogenesis	P	Protein Shroom4 (Second homolog of apical protein)
ruditapes_c2493	multicellular organismal development	developmental processes	P	Protein Shroom4 (Second homolog of apical protein)
ruditapes_c2493	brain development	developmental processes	P	Protein Shroom4 (Second homolog of apical protein)
ruditapes_c30878	transport	transport	P	Unconventional myosin-Vb
ruditapes_c30878	vesicle-mediated transport	transport	P	Unconventional myosin-Vb
ruditapes_c30878	protein transport	transport	P	Unconventional myosin-Vb
ruditapes_c30878	regulation of protein localization	other biological processes	P	Unconventional myosin-Vb
ruditapes2_c1760	immune response	other biological processes	P	C-type lectin domain family 4 member E (C-type lectin superfamily member 9) (Macrophage-inducible C-type lectin)
ruditapes2_c1760	positive regulation of cytokine secretion	transport	P	C-type lectin domain family 4 member E (C-type lectin superfamily member 9) (Macrophage-inducible C-type lectin)
ruditapes_c18481	protein modification process	protein metabolism	P	Protein-arginine deiminase type-4 (EC 3.5.3.15) (HL-60 PAD) (Peptidylarginine deiminase IV) (Protein-arginine deiminase type IV)
ruditapes_c18481	"transcription, DNA-dependent"	RNA metabolism	P	Protein-arginine deiminase type-4 (EC 3.5.3.15) (HL-60 PAD) (Peptidylarginine deiminase IV) (Protein-arginine deiminase type IV)
ruditapes_c18481	chromatin modification	cell organization and biogenesis	P	Protein-arginine deiminase type-4 (EC 3.5.3.15) (HL-60 PAD) (Peptidylarginine deiminase IV) (Protein-arginine deiminase type IV)
ruditapes_c18481	peptidyl-citrulline biosynthetic process from peptidyl-arginine	protein metabolism	P	Protein-arginine deiminase type-4 (EC 3.5.3.15) (HL-60 PAD) (Peptidylarginine deiminase IV) (Protein-arginine deiminase type IV)
ruditapes_c18481	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein-arginine deiminase type-4 (EC 3.5.3.15) (HL-60 PAD) (Peptidylarginine deiminase IV) (Protein-arginine deiminase type IV)
ruditapes_s36736	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1) (Upregulated in colorectal cancer gene 1 protein)
ruditapes2_c5799	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1) (Upregulated in colorectal cancer gene 1 protein)
ruditapes_s36653	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1) (Upregulated in colorectal cancer gene 1 protein)
ruditapes2_lrc6026	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1) (Upregulated in colorectal cancer gene 1 protein)
ruditapes_lrc36450	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1) (Upregulated in colorectal cancer gene 1 protein)
ruditapes_s39617	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1) (Upregulated in colorectal cancer gene 1 protein)
ruditapes_lrc35147	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1) (Upregulated in colorectal cancer gene 1 protein)
ruditapes2_c1559	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1) (Upregulated in colorectal cancer gene 1 protein)
ruditapes_c5569	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1) (Upregulated in colorectal cancer gene 1 protein)
ruditapes_lrc32277	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1) (Upregulated in colorectal cancer gene 1 protein)
ruditapes_lrc32238	cell-matrix adhesion	cell adhesion	P	Mammalian ependymin-related protein 1 (MERP-1) (Upregulated in colorectal cancer gene 1 protein)
ruditapes_c7034	cell adhesion	cell adhesion	P	C-type lectin domain family 4 member A (C-type lectin DDB27) (C-type lectin superfamily member 6) (Dendritic cell immunoreceptor) (Lectin-like immunoreceptor)
ruditapes_c7034	cell surface receptor linked signal transduction	signal transduction	P	C-type lectin domain family 4 member A (C-type lectin DDB27) (C-type lectin superfamily member 6) (Dendritic cell immunoreceptor) (Lectin-like immunoreceptor)
ruditapes_c7034	innate immune response	stress response	P	C-type lectin domain family 4 member A (C-type lectin DDB27) (C-type lectin superfamily member 6) (Dendritic cell immunoreceptor) (Lectin-like immunoreceptor)
ruditapes_c11038	phototransduction	other biological processes	P	Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B)
ruditapes_c11038	response to stimulus	other biological processes	P	Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B)
ruditapes_c11038	visual perception	other biological processes	P	Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B)
ruditapes_c11038	receptor guanylyl cyclase signaling pathway	signal transduction	P	Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B)
ruditapes_c11038	cell-cell signaling	cell-cell signaling	P	Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B)
ruditapes_c11038	body fluid secretion	transport	P	Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B)
ruditapes_c11038	regulation of cyclase activity	other metabolic processes	P	Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B)
ruditapes_c11038	positive regulation of catalytic activity	other biological processes	P	Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B)
ruditapes_c11038	regulation of guanylate cyclase activity	other metabolic processes	P	Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B)
ruditapes_c12445	protein transport	transport	P	Sorting nexin-12
ruditapes_c12445	transport	transport	P	Sorting nexin-12
ruditapes_c12445	cell communication	other biological processes	P	Sorting nexin-12
ruditapes_c26156	transport	transport	P	Vacuolar protein sorting-associated protein 4A (EC 3.6.4.6) (Protein SKD2) (VPS4-1) (hVPS4)
ruditapes_c26156	cell division	other biological processes	P	Vacuolar protein sorting-associated protein 4A (EC 3.6.4.6) (Protein SKD2) (VPS4-1) (hVPS4)
ruditapes_c26156	vesicle-mediated transport	transport	P	Vacuolar protein sorting-associated protein 4A (EC 3.6.4.6) (Protein SKD2) (VPS4-1) (hVPS4)
ruditapes_c26156	protein transport	transport	P	Vacuolar protein sorting-associated protein 4A (EC 3.6.4.6) (Protein SKD2) (VPS4-1) (hVPS4)
ruditapes_c26156	endosome transport	transport	P	Vacuolar protein sorting-associated protein 4A (EC 3.6.4.6) (Protein SKD2) (VPS4-1) (hVPS4)
ruditapes_c26156	membrane organization	cell organization and biogenesis	P	Vacuolar protein sorting-associated protein 4A (EC 3.6.4.6) (Protein SKD2) (VPS4-1) (hVPS4)
ruditapes_c26156	cytokinesis	other biological processes	P	Vacuolar protein sorting-associated protein 4A (EC 3.6.4.6) (Protein SKD2) (VPS4-1) (hVPS4)
ruditapes_c26156	cell cycle	cell cycle and proliferation	P	Vacuolar protein sorting-associated protein 4A (EC 3.6.4.6) (Protein SKD2) (VPS4-1) (hVPS4)
ruditapes_c12176	transmembrane transport	transport	P	Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) (Amino acid transporter ATB0+) (Solute carrier family 6 member 14)
ruditapes_c12176	ion transport	transport	P	Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) (Amino acid transporter ATB0+) (Solute carrier family 6 member 14)
ruditapes_c12176	amino acid transport	transport	P	Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) (Amino acid transporter ATB0+) (Solute carrier family 6 member 14)
ruditapes_c12176	cellular amino acid metabolic process	other metabolic processes	P	Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) (Amino acid transporter ATB0+) (Solute carrier family 6 member 14)
ruditapes_c12176	response to toxin	other biological processes	P	Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) (Amino acid transporter ATB0+) (Solute carrier family 6 member 14)
ruditapes_c12176	transport	transport	P	Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) (Amino acid transporter ATB0+) (Solute carrier family 6 member 14)
ruditapes_c12176	neurotransmitter transport	transport	P	Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) (Amino acid transporter ATB0+) (Solute carrier family 6 member 14)
ruditapes_c26438	cell proliferation	cell cycle and proliferation	P	Dual specificity protein phosphatase CDC14A (EC 3.1.3.16) (EC 3.1.3.48) (CDC14 cell division cycle 14 homolog A)
ruditapes_c26438	cell division	other biological processes	P	Dual specificity protein phosphatase CDC14A (EC 3.1.3.16) (EC 3.1.3.48) (CDC14 cell division cycle 14 homolog A)
ruditapes_c26438	protein amino acid dephosphorylation	protein metabolism	P	Dual specificity protein phosphatase CDC14A (EC 3.1.3.16) (EC 3.1.3.48) (CDC14 cell division cycle 14 homolog A)
ruditapes_c26438	cell cycle	cell cycle and proliferation	P	Dual specificity protein phosphatase CDC14A (EC 3.1.3.16) (EC 3.1.3.48) (CDC14 cell division cycle 14 homolog A)
ruditapes_c26438	dephosphorylation	other metabolic processes	P	Dual specificity protein phosphatase CDC14A (EC 3.1.3.16) (EC 3.1.3.48) (CDC14 cell division cycle 14 homolog A)
ruditapes2_c3944	gene expression	other metabolic processes	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes2_c3944	translation	protein metabolism	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_lrc40229	gene expression	other metabolic processes	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_lrc40229	cellular protein metabolic process	protein metabolism	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_c3399	translation	protein metabolism	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_c3399	gene expression	other metabolic processes	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes2_c3301	translation	protein metabolism	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_c3399	SRP-dependent cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes2_c3301	gene expression	other metabolic processes	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_lrc40229	SRP-dependent cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_c3399	cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes2_c3944	SRP-dependent cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes2_c3301	SRP-dependent cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_lrc40229	cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_c1669	cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes2_c3944	cellular protein metabolic process	protein metabolism	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes2_c3301	cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_lrc40229	translation	protein metabolism	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_c3399	cellular protein metabolic process	protein metabolism	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes2_c3944	cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_c1669	SRP-dependent cotranslational protein targeting to membrane	transport	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_c1669	cellular protein metabolic process	protein metabolism	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes2_c3301	cellular protein metabolic process	protein metabolism	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_c1669	gene expression	other metabolic processes	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_c1669	translation	protein metabolism	P	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)
ruditapes_c16508	antigen processing and presentation of exogenous peptide antigen via MHC class I	other biological processes	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent"	other biological processes	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	signal transduction	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	stress response	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	meiosis I	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest"	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	regulation of amino acid metabolic process	other metabolic processes	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	antigen processing and presentation of peptide antigen via MHC class I	other biological processes	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	regulation of ubiquitin-protein ligase activity during mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	M/G1 transition of mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	viral reproduction	other biological processes	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	S phase of mitotic cell cycle	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	RNA metabolic process	RNA metabolism	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	gene expression	other metabolic processes	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	cellular nitrogen compound metabolic process	other metabolic processes	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	apoptosis	death	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	protein polyubiquitination	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	cell cycle checkpoint	cell cycle and proliferation	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	regulation of apoptosis	death	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes_c16508	mRNA metabolic process	RNA metabolism	P	26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5)
ruditapes2_c4845	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	translational termination	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	translational termination	cell organization and biogenesis	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	translational elongation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	viral reproduction	other biological processes	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	translational termination	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	translational termination	cell organization and biogenesis	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	translation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	gene expression	other metabolic processes	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	translational initiation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	translational termination	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	translational termination	cell organization and biogenesis	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	viral transcription	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	translational elongation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	viral infectious cycle	other biological processes	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	viral transcription	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	viral reproduction	other biological processes	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	translational initiation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	translation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	gene expression	other metabolic processes	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	RNA metabolic process	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	viral reproduction	other biological processes	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	gene expression	other metabolic processes	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	translational termination	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	translational termination	cell organization and biogenesis	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	viral infectious cycle	other biological processes	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	translational initiation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	viral infectious cycle	other biological processes	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	translation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	gene expression	other metabolic processes	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	translation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	cellular protein metabolic process	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay"	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc38322	translational initiation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	viral transcription	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	translational elongation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	mRNA metabolic process	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	viral infectious cycle	other biological processes	P	60S ribosomal protein L26-like 1
ruditapes_lrc32584	viral reproduction	other biological processes	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	translational elongation	protein metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c5480	viral transcription	RNA metabolism	P	60S ribosomal protein L26-like 1
ruditapes2_c4845	SRP-dependent cotranslational protein targeting to membrane	transport	P	60S ribosomal protein L26-like 1
ruditapes_c1694	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c1694	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c4670	negative regulation of BMP signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c4670	regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c4670	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c4670	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c1694	negative regulation of BMP signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c4670	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c1694	regulation of transforming growth factor beta receptor signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c1694	"regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c4670	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes_c1694	"transcription, DNA-dependent"	RNA metabolism	P	E3 ubiquitin-protein ligase TRIM33 (EC 6.3.2.-) (Ectodermin homolog) (RET-fused gene 7 protein) (Protein Rfg7) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)
ruditapes2_lrc3322	lipid metabolic process	other metabolic processes	P	Inactive phospholipase C-like protein 2 (PLC-L(2)) (PLC-L2) (Phospholipase C-L2) (Phospholipase C-epsilon-2) (PLC-epsilon-2)
ruditapes2_lrc3322	signal transduction	signal transduction	P	Inactive phospholipase C-like protein 2 (PLC-L(2)) (PLC-L2) (Phospholipase C-L2) (Phospholipase C-epsilon-2) (PLC-epsilon-2)
ruditapes_c17458	exocytosis	transport	P	Exocyst complex component 7 (Exocyst complex component Exo70)
ruditapes_c17458	transport	transport	P	Exocyst complex component 7 (Exocyst complex component Exo70)
ruditapes_c17458	protein transport	transport	P	Exocyst complex component 7 (Exocyst complex component Exo70)
ruditapes_c12074	positive regulation of GTPase activity	other biological processes	P	TBC1 domain family member 2B
ruditapes_c12074	regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 2B
ruditapes_c12074	positive regulation of Rab GTPase activity	signal transduction	P	TBC1 domain family member 2B
ruditapes_c21417	exocytosis	transport	P	Protein unc-13 homolog A (Munc13-1)
ruditapes_c15271	female pregnancy	other biological processes	P	Pregnancy-specific beta-1-glycoprotein 11 (PS-beta-G-11) (PSBG-11) (Pregnancy-specific glycoprotein 11) (Pregnancy-specific beta-1-glycoprotein 13) (PS-beta-G-13) (PSBG-13) (Pregnancy-specific glycoprotein 13)
ruditapes_c20664	cell-matrix adhesion	cell adhesion	P	Tenascin-N (TN-N)
ruditapes_c20664	axonogenesis	developmental processes	P	Tenascin-N (TN-N)
ruditapes_c20664	axonogenesis	cell organization and biogenesis	P	Tenascin-N (TN-N)
ruditapes_c20664	signal transduction	signal transduction	P	Tenascin-N (TN-N)
ruditapes_c20664	cell migration	other biological processes	P	Tenascin-N (TN-N)
ruditapes_c20664	cell growth	other biological processes	P	Tenascin-N (TN-N)
ruditapes_lrc34065	methylation	other metabolic processes	P	Demethylsterigmatocystin 6-O-methyltransferase (EC 2.1.1.109) (Aflatoxin biosynthesis protein O) (Methyltransferase B) (O-methyltransferase I) (mt-I)
ruditapes_lrc38579	methylation	other metabolic processes	P	Demethylsterigmatocystin 6-O-methyltransferase (EC 2.1.1.109) (Aflatoxin biosynthesis protein O) (Methyltransferase B) (O-methyltransferase I) (mt-I)
ruditapes_lrc33302	methylation	other metabolic processes	P	Demethylsterigmatocystin 6-O-methyltransferase (EC 2.1.1.109) (Aflatoxin biosynthesis protein O) (Methyltransferase B) (O-methyltransferase I) (mt-I)
ruditapes2_c4318	methylation	other metabolic processes	P	Demethylsterigmatocystin 6-O-methyltransferase (EC 2.1.1.109) (Aflatoxin biosynthesis protein O) (Methyltransferase B) (O-methyltransferase I) (mt-I)
ruditapes_lrc36233	methylation	other metabolic processes	P	Demethylsterigmatocystin 6-O-methyltransferase (EC 2.1.1.109) (Aflatoxin biosynthesis protein O) (Methyltransferase B) (O-methyltransferase I) (mt-I)
ruditapes_lrc33762	methylation	other metabolic processes	P	Demethylsterigmatocystin 6-O-methyltransferase (EC 2.1.1.109) (Aflatoxin biosynthesis protein O) (Methyltransferase B) (O-methyltransferase I) (mt-I)
ruditapes_c15787	proteolysis	protein metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes2_c532	RNA-dependent DNA replication	DNA metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes_c27025	proteolysis	protein metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes_c15787	DNA integration	DNA metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes_c27025	DNA integration	DNA metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes2_c532	DNA integration	DNA metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes_c27025	RNA-dependent DNA replication	DNA metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes_c19418	DNA integration	DNA metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes_c19418	proteolysis	protein metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes_c15787	RNA-dependent DNA replication	DNA metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes_c19418	RNA-dependent DNA replication	DNA metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes2_c532	proteolysis	protein metabolism	P	Retrotransposable element Tf2 155 kDa protein type 3
ruditapes_lrc10278	transcription-coupled nucleotide-excision repair	stress response	P	DNA repair protein rhp26 (EC 3.6.4.-) (RAD26 homolog)
ruditapes_lrc10278	transcription-coupled nucleotide-excision repair	DNA metabolism	P	DNA repair protein rhp26 (EC 3.6.4.-) (RAD26 homolog)
ruditapes_lrc14757	cyclin catabolic process	protein metabolism	P	Anaphase-promoting complex subunit 1 (20S cyclosome/APC complex protein apc1) (Cell untimely torn protein 4)
ruditapes_lrc14757	protein ubiquitination	protein metabolism	P	Anaphase-promoting complex subunit 1 (20S cyclosome/APC complex protein apc1) (Cell untimely torn protein 4)
ruditapes_lrc14757	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	protein metabolism	P	Anaphase-promoting complex subunit 1 (20S cyclosome/APC complex protein apc1) (Cell untimely torn protein 4)
ruditapes_lrc14757	cell cycle	cell cycle and proliferation	P	Anaphase-promoting complex subunit 1 (20S cyclosome/APC complex protein apc1) (Cell untimely torn protein 4)
ruditapes_lrc14757	mitosis	cell cycle and proliferation	P	Anaphase-promoting complex subunit 1 (20S cyclosome/APC complex protein apc1) (Cell untimely torn protein 4)
ruditapes_lrc14757	mitosis	cell organization and biogenesis	P	Anaphase-promoting complex subunit 1 (20S cyclosome/APC complex protein apc1) (Cell untimely torn protein 4)
ruditapes_lrc14757	cell division	other biological processes	P	Anaphase-promoting complex subunit 1 (20S cyclosome/APC complex protein apc1) (Cell untimely torn protein 4)
ruditapes_lrc14757	regulation of mitotic metaphase/anaphase transition	cell cycle and proliferation	P	Anaphase-promoting complex subunit 1 (20S cyclosome/APC complex protein apc1) (Cell untimely torn protein 4)
ruditapes_lrc14757	regulation of mitotic metaphase/anaphase transition	cell organization and biogenesis	P	Anaphase-promoting complex subunit 1 (20S cyclosome/APC complex protein apc1) (Cell untimely torn protein 4)
ruditapes_c25727	biological_process	other biological processes	P	Putative zinc metalloproteinase C607.06c (EC 3.4.24.-)
ruditapes_c25727	proteolysis	protein metabolism	P	Putative zinc metalloproteinase C607.06c (EC 3.4.24.-)
ruditapes_c795	chromosome segregation	other biological processes	P	Kinetochore protein fta2 (Sim4 complex subunit fta2) (Sim4-mal2-associated protein 2)
ruditapes_c795	cell cycle	cell cycle and proliferation	P	Kinetochore protein fta2 (Sim4 complex subunit fta2) (Sim4-mal2-associated protein 2)
ruditapes_c795	mitosis	cell cycle and proliferation	P	Kinetochore protein fta2 (Sim4 complex subunit fta2) (Sim4-mal2-associated protein 2)
ruditapes_c795	mitosis	cell organization and biogenesis	P	Kinetochore protein fta2 (Sim4 complex subunit fta2) (Sim4-mal2-associated protein 2)
ruditapes_c795	cell division	other biological processes	P	Kinetochore protein fta2 (Sim4 complex subunit fta2) (Sim4-mal2-associated protein 2)
ruditapes_c795	cellular protein localization	other biological processes	P	Kinetochore protein fta2 (Sim4 complex subunit fta2) (Sim4-mal2-associated protein 2)
ruditapes_c795	mitotic sister chromatid segregation	cell cycle and proliferation	P	Kinetochore protein fta2 (Sim4 complex subunit fta2) (Sim4-mal2-associated protein 2)
ruditapes_c795	mitotic sister chromatid segregation	cell organization and biogenesis	P	Kinetochore protein fta2 (Sim4 complex subunit fta2) (Sim4-mal2-associated protein 2)
ruditapes_c795	attachment of spindle microtubules to kinetochore	cell organization and biogenesis	P	Kinetochore protein fta2 (Sim4 complex subunit fta2) (Sim4-mal2-associated protein 2)
ruditapes_c29305	cellular manganese ion homeostasis	other biological processes	P	Uncharacterized protein C4B3.03c
ruditapes_c12055	mitochondrion organization	cell organization and biogenesis	P	Uncharacterized protein C4B3.03c
ruditapes_c12055	cellular manganese ion homeostasis	other biological processes	P	Uncharacterized protein C4B3.03c
ruditapes_c29305	mitochondrion organization	cell organization and biogenesis	P	Uncharacterized protein C4B3.03c
ruditapes_s38169	lipid metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_s38169	metabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_s38169	lipid catabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_s38169	phosphatidylcholine catabolic process	other metabolic processes	P	Lysophospholipase NTE1 (EC 3.1.1.5) (Intracellular phospholipase B) (Neuropathy target esterase homolog)
ruditapes_c12927	meiosis	cell cycle and proliferation	P	Diphthine--ammonia ligase (EC 6.3.1.14) (Diphthamide synthase) (Diphthamide synthetase)
ruditapes_c20674	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase ppk29 (EC 2.7.11.1)
ruditapes_c20674	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase ppk29 (EC 2.7.11.1)
ruditapes_c20674	actin filament organization	cell organization and biogenesis	P	Serine/threonine-protein kinase ppk29 (EC 2.7.11.1)
ruditapes_c20674	actin cortical patch assembly	cell organization and biogenesis	P	Serine/threonine-protein kinase ppk29 (EC 2.7.11.1)
ruditapes_c4772	"transcription, DNA-dependent"	RNA metabolism	P	Transcription factor tau subunit sfc3 (TFIIIC subunit sfc3) (Transcription factor C subunit 3)
ruditapes_c4772	transcription initiation from RNA polymerase III promoter	RNA metabolism	P	Transcription factor tau subunit sfc3 (TFIIIC subunit sfc3) (Transcription factor C subunit 3)
ruditapes_c4772	transcription initiation from RNA polymerase III promoter	cell organization and biogenesis	P	Transcription factor tau subunit sfc3 (TFIIIC subunit sfc3) (Transcription factor C subunit 3)
ruditapes_c4772	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription factor tau subunit sfc3 (TFIIIC subunit sfc3) (Transcription factor C subunit 3)
ruditapes_c12808	cellular catabolic process	other metabolic processes	P	Aminopeptidase 1 (EC 3.4.11.-) (Aminopeptidase I)
ruditapes_c29495	cellular catabolic process	other metabolic processes	P	Aminopeptidase 1 (EC 3.4.11.-) (Aminopeptidase I)
ruditapes_c12808	proteolysis	protein metabolism	P	Aminopeptidase 1 (EC 3.4.11.-) (Aminopeptidase I)
ruditapes_c29495	proteolysis	protein metabolism	P	Aminopeptidase 1 (EC 3.4.11.-) (Aminopeptidase I)
ruditapes_c31723	regulation of RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Elongin-C
ruditapes_c31723	ubiquitin-dependent protein catabolic process	protein metabolism	P	Elongin-C
ruditapes_c31118	metabolic process	other metabolic processes	P	Pseudouridine-metabolizing bifunctional protein C1861.05 [Includes: Pseudouridine-5'-phosphate glycosidase (PsiMP glycosidase) (EC 3.2.-.-); Pseudouridine kinase (EC 2.7.1.83)]
ruditapes_c31118	phosphorylation	other metabolic processes	P	Pseudouridine-metabolizing bifunctional protein C1861.05 [Includes: Pseudouridine-5'-phosphate glycosidase (PsiMP glycosidase) (EC 3.2.-.-); Pseudouridine kinase (EC 2.7.1.83)]
ruditapes_c31118	biological_process	other biological processes	P	Pseudouridine-metabolizing bifunctional protein C1861.05 [Includes: Pseudouridine-5'-phosphate glycosidase (PsiMP glycosidase) (EC 3.2.-.-); Pseudouridine kinase (EC 2.7.1.83)]
ruditapes_c8880	ER to Golgi vesicle-mediated transport	transport	P	Protein transport protein sec71
ruditapes_c8880	regulation of ARF protein signal transduction	signal transduction	P	Protein transport protein sec71
ruditapes_c8880	intracellular protein transport	transport	P	Protein transport protein sec71
ruditapes_c8880	transport	transport	P	Protein transport protein sec71
ruditapes_c8880	protein transport	transport	P	Protein transport protein sec71
ruditapes_c23927	proteolysis	protein metabolism	P	Tripeptidyl-peptidase 2 homolog (TPP-2) (EC 3.4.14.10) (Multicorn protease)
ruditapes_c23927	protein processing	protein metabolism	P	Tripeptidyl-peptidase 2 homolog (TPP-2) (EC 3.4.14.10) (Multicorn protease)
ruditapes_c13086	cation transport	transport	P	Putative phospholipid-transporting ATPase C821.13c (EC 3.6.3.1)
ruditapes_c13086	phospholipid transport	transport	P	Putative phospholipid-transporting ATPase C821.13c (EC 3.6.3.1)
ruditapes_c13086	phospholipid translocation	transport	P	Putative phospholipid-transporting ATPase C821.13c (EC 3.6.3.1)
ruditapes_c13086	phospholipid translocation	cell organization and biogenesis	P	Putative phospholipid-transporting ATPase C821.13c (EC 3.6.3.1)
ruditapes_c13086	metabolic process	other metabolic processes	P	Putative phospholipid-transporting ATPase C821.13c (EC 3.6.3.1)
ruditapes_c430	cell division	other biological processes	P	"Endo-1,3(4)-beta-glucanase 1 (Endo-1,3-beta-glucanase 1) (Endo-1,4-beta-glucanase 1) (EC 3.2.1.6) (Laminarinase-1)"
ruditapes_c430	oligosaccharide catabolic process	other metabolic processes	P	"Endo-1,3(4)-beta-glucanase 1 (Endo-1,3-beta-glucanase 1) (Endo-1,4-beta-glucanase 1) (EC 3.2.1.6) (Laminarinase-1)"
ruditapes_c430	cell cycle	cell cycle and proliferation	P	"Endo-1,3(4)-beta-glucanase 1 (Endo-1,3-beta-glucanase 1) (Endo-1,4-beta-glucanase 1) (EC 3.2.1.6) (Laminarinase-1)"
ruditapes_c430	extracellular polysaccharide metabolic process	other metabolic processes	P	"Endo-1,3(4)-beta-glucanase 1 (Endo-1,3-beta-glucanase 1) (Endo-1,4-beta-glucanase 1) (EC 3.2.1.6) (Laminarinase-1)"
ruditapes_c430	cell separation during cytokinesis	other biological processes	P	"Endo-1,3(4)-beta-glucanase 1 (Endo-1,3-beta-glucanase 1) (Endo-1,4-beta-glucanase 1) (EC 3.2.1.6) (Laminarinase-1)"
ruditapes_c430	metabolic process	other metabolic processes	P	"Endo-1,3(4)-beta-glucanase 1 (Endo-1,3-beta-glucanase 1) (Endo-1,4-beta-glucanase 1) (EC 3.2.1.6) (Laminarinase-1)"
ruditapes_c430	cell wall macromolecule catabolic process	other metabolic processes	P	"Endo-1,3(4)-beta-glucanase 1 (Endo-1,3-beta-glucanase 1) (Endo-1,4-beta-glucanase 1) (EC 3.2.1.6) (Laminarinase-1)"
ruditapes_c430	primary cell septum disassembly	cell organization and biogenesis	P	"Endo-1,3(4)-beta-glucanase 1 (Endo-1,3-beta-glucanase 1) (Endo-1,4-beta-glucanase 1) (EC 3.2.1.6) (Laminarinase-1)"
ruditapes_c12362	endocytosed protein transport to vacuole	transport	P	Inositol phosphoceramide mannosyltransferase 2 (EC 2.4.-.-) (IPC mannosyltransferase 2)
ruditapes_c12362	endocytosis	transport	P	Inositol phosphoceramide mannosyltransferase 2 (EC 2.4.-.-) (IPC mannosyltransferase 2)
ruditapes_c12362	endocytosis	cell organization and biogenesis	P	Inositol phosphoceramide mannosyltransferase 2 (EC 2.4.-.-) (IPC mannosyltransferase 2)
ruditapes_c12362	glycosphingolipid biosynthetic process	other metabolic processes	P	Inositol phosphoceramide mannosyltransferase 2 (EC 2.4.-.-) (IPC mannosyltransferase 2)
ruditapes_c28502	response to DNA damage stimulus	stress response	P	Multicopy suppressor of chk1 protein 1
ruditapes_c28502	chromatin modification	cell organization and biogenesis	P	Multicopy suppressor of chk1 protein 1
ruditapes_c28502	oxidation reduction	other metabolic processes	P	Multicopy suppressor of chk1 protein 1
ruditapes_c28502	histone acetylation	protein metabolism	P	Multicopy suppressor of chk1 protein 1
ruditapes_c28502	histone acetylation	cell organization and biogenesis	P	Multicopy suppressor of chk1 protein 1
ruditapes_c28502	meiosis	cell cycle and proliferation	P	Multicopy suppressor of chk1 protein 1
ruditapes_c27666	NADP biosynthetic process	other metabolic processes	P	"NADH kinase pos5, mitochondrial (EC 2.7.1.86)"
ruditapes_c27666	metabolic process	other metabolic processes	P	"NADH kinase pos5, mitochondrial (EC 2.7.1.86)"
ruditapes_c27666	phosphorylation	other metabolic processes	P	"NADH kinase pos5, mitochondrial (EC 2.7.1.86)"
ruditapes_c31274	N-terminal peptidyl-methionine acetylation	protein metabolism	P	N-terminal acetyltransferase A complex catalytic subunit ard1 (NatA complex subunit ARD1) (EC 2.3.1.88)
ruditapes_c23846	mitochondrial translation	protein metabolism	P	"Rsm22-cox11 tandem protein 1, mitochondrial [Cleaved into: 37S ribosomal protein S22-1 (EC 2.1.1.-); Cytochrome c oxidase assembly protein cox11-1]"
ruditapes_c23846	mitochondrial translation	cell organization and biogenesis	P	"Rsm22-cox11 tandem protein 1, mitochondrial [Cleaved into: 37S ribosomal protein S22-1 (EC 2.1.1.-); Cytochrome c oxidase assembly protein cox11-1]"
ruditapes_c23846	translation	protein metabolism	P	"Rsm22-cox11 tandem protein 1, mitochondrial [Cleaved into: 37S ribosomal protein S22-1 (EC 2.1.1.-); Cytochrome c oxidase assembly protein cox11-1]"
ruditapes_c23846	respiratory chain complex IV assembly	cell organization and biogenesis	P	"Rsm22-cox11 tandem protein 1, mitochondrial [Cleaved into: 37S ribosomal protein S22-1 (EC 2.1.1.-); Cytochrome c oxidase assembly protein cox11-1]"
ruditapes_c23846	methylation	other metabolic processes	P	"Rsm22-cox11 tandem protein 1, mitochondrial [Cleaved into: 37S ribosomal protein S22-1 (EC 2.1.1.-); Cytochrome c oxidase assembly protein cox11-1]"
ruditapes_c13323	oxidation reduction	other metabolic processes	P	Uncharacterized protein C1071.11
ruditapes_lrc23674	meiosis	cell cycle and proliferation	P	Meiotically up-regulated gene 170 protein
ruditapes_c26899	meiosis	cell cycle and proliferation	P	Meiotic expression up-regulated protein 18
ruditapes_c18404	meiosis	cell cycle and proliferation	P	Meiotic expression up-regulated protein 18
ruditapes_c14329	meiosis	cell cycle and proliferation	P	Meiotic expression up-regulated protein 18
ruditapes_lrc17522	translation	protein metabolism	P	60S ribosomal protein L21-A
ruditapes_c2614	positive regulation of GTPase activity	other biological processes	P	GTPase-activating protein gyp7 (GAP for ypt7)
ruditapes_c2614	vesicle-mediated transport	transport	P	GTPase-activating protein gyp7 (GAP for ypt7)
ruditapes_c2614	positive regulation of Rab GTPase activity	signal transduction	P	GTPase-activating protein gyp7 (GAP for ypt7)
ruditapes_c2614	regulation of Rab GTPase activity	signal transduction	P	GTPase-activating protein gyp7 (GAP for ypt7)
ruditapes_c2127	DNA replication	DNA metabolism	P	Replication termination factor 1
ruditapes_c2127	negative regulation of DNA replication	DNA metabolism	P	Replication termination factor 1
ruditapes_c2127	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Replication termination factor 1
ruditapes_c14693	ascospore wall assembly	cell organization and biogenesis	P	"Cell wall alpha-1,3-glucan synthase mok12 (EC 2.4.1.183)"
ruditapes_c14693	biosynthetic process	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok12 (EC 2.4.1.183)"
ruditapes_c14693	cell wall organization	cell organization and biogenesis	P	"Cell wall alpha-1,3-glucan synthase mok12 (EC 2.4.1.183)"
ruditapes_c14693	alpha-glucan biosynthetic process	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok12 (EC 2.4.1.183)"
ruditapes_c14693	carbohydrate metabolic process	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok12 (EC 2.4.1.183)"
ruditapes_c14693	"1,3-alpha-glucan biosynthetic process"	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok12 (EC 2.4.1.183)"
ruditapes_lrc35257	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39740	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc35686	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc35257	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc34813	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39885	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39885	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39740	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39885	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39885	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39740	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39885	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc35257	phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc35257	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc35686	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc35257	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc34813	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc35686	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc34813	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc34813	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc35686	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39885	nucleotide metabolic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39740	GTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc34813	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc34813	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39740	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc35686	CTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_s39740	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc35257	UTP biosynthetic process	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_lrc35686	nucleoside diphosphate phosphorylation	other metabolic processes	P	Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6)
ruditapes_c15691	metabolic process	other metabolic processes	P	"1,4-beta-D-glucan cellobiohydrolase B (EC 3.2.1.91) (Beta-glucancellobiohydrolase B) (Exocellobiohydrolase B) (Exoglucanase B)"
ruditapes_c15691	cellulose catabolic process	other metabolic processes	P	"1,4-beta-D-glucan cellobiohydrolase B (EC 3.2.1.91) (Beta-glucancellobiohydrolase B) (Exocellobiohydrolase B) (Exoglucanase B)"
ruditapes_c15691	polysaccharide catabolic process	other metabolic processes	P	"1,4-beta-D-glucan cellobiohydrolase B (EC 3.2.1.91) (Beta-glucancellobiohydrolase B) (Exocellobiohydrolase B) (Exoglucanase B)"
ruditapes_c15691	carbohydrate metabolic process	other metabolic processes	P	"1,4-beta-D-glucan cellobiohydrolase B (EC 3.2.1.91) (Beta-glucancellobiohydrolase B) (Exocellobiohydrolase B) (Exoglucanase B)"
ruditapes_lrc38115	ribosome biogenesis	other biological processes	P	Probable brix domain-containing ribosomal biogenesis protein
ruditapes_c28415	oxidation reduction	other metabolic processes	P	Probable glycine dehydrogenase [decarboxylating] subunit 1 (EC 1.4.4.2) (Glycine cleavage system P-protein subunit 1) (Glycine decarboxylase subunit 1)
ruditapes_c10095	tRNA processing	RNA metabolism	P	tRNA (guanine(37)-N1)-methyltransferase Trm5b (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_c10095	methylation	other metabolic processes	P	tRNA (guanine(37)-N1)-methyltransferase Trm5b (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_c10095	tRNA methylation	RNA metabolism	P	tRNA (guanine(37)-N1)-methyltransferase Trm5b (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
ruditapes_c12997	translation	protein metabolism	P	Peptide chain release factor subunit 1 (Translation termination factor aRF1)
ruditapes_c12997	translational termination	protein metabolism	P	Peptide chain release factor subunit 1 (Translation termination factor aRF1)
ruditapes_c12997	translational termination	cell organization and biogenesis	P	Peptide chain release factor subunit 1 (Translation termination factor aRF1)
ruditapes_c5441	metabolic process	other metabolic processes	P	Uncharacterized HAD-hydrolase PYRAB05140 (EC 3.-.-.-)
ruditapes_c31420	nucleoside metabolic process	other metabolic processes	P	Amidophosphoribosyltransferase (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPATase)
ruditapes_c31420	purine base biosynthetic process	other metabolic processes	P	Amidophosphoribosyltransferase (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPATase)
ruditapes_c31420	glutamine metabolic process	other metabolic processes	P	Amidophosphoribosyltransferase (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPATase)
ruditapes_c31420	purine nucleotide biosynthetic process	other metabolic processes	P	Amidophosphoribosyltransferase (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPATase)
ruditapes2_lrc3639	regulation of postsynaptic membrane potential	cell-cell signaling	P	Protein RIC1 homolog
ruditapes2_lrc3639	R7 cell development	developmental processes	P	Protein RIC1 homolog
ruditapes2_lrc3639	axon guidance	developmental processes	P	Protein RIC1 homolog
ruditapes2_lrc3639	axon guidance	cell organization and biogenesis	P	Protein RIC1 homolog
ruditapes2_lrc3639	positive regulation of Rab GTPase activity	signal transduction	P	Protein RIC1 homolog
ruditapes2_lrc3639	synapse organization	cell organization and biogenesis	P	Protein RIC1 homolog
ruditapes_c25351	cellular process	other biological processes	P	26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory subunit S10) (Protein Rpn7)
ruditapes_c24176	cellular process	other biological processes	P	26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory subunit S10) (Protein Rpn7)
ruditapes_c25351	proteolysis	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory subunit S10) (Protein Rpn7)
ruditapes_c24176	proteolysis	protein metabolism	P	26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory subunit S10) (Protein Rpn7)
ruditapes_c22123	proton transport	transport	P	V-type proton ATPase subunit H (V-ATPase subunit H) (Vacuolar proton pump subunit H) (Vacuolar proton pump subunit SFD)
ruditapes_c22123	ion transport	transport	P	V-type proton ATPase subunit H (V-ATPase subunit H) (Vacuolar proton pump subunit H) (Vacuolar proton pump subunit SFD)
ruditapes_c22123	transport	transport	P	V-type proton ATPase subunit H (V-ATPase subunit H) (Vacuolar proton pump subunit H) (Vacuolar proton pump subunit SFD)
ruditapes_c22123	determination of adult life span	developmental processes	P	V-type proton ATPase subunit H (V-ATPase subunit H) (Vacuolar proton pump subunit H) (Vacuolar proton pump subunit SFD)
ruditapes_c22123	dsRNA transport	transport	P	V-type proton ATPase subunit H (V-ATPase subunit H) (Vacuolar proton pump subunit H) (Vacuolar proton pump subunit SFD)
ruditapes_c22123	ATP hydrolysis coupled proton transport	transport	P	V-type proton ATPase subunit H (V-ATPase subunit H) (Vacuolar proton pump subunit H) (Vacuolar proton pump subunit SFD)
ruditapes_c17638	negative regulation of immune response	other biological processes	P	Defense protein l(2)34Fc
ruditapes_c17638	innate immune response	stress response	P	Defense protein l(2)34Fc
ruditapes_c17638	defense response to bacterium	stress response	P	Defense protein l(2)34Fc
ruditapes_c17638	defense response to protozoan	stress response	P	Defense protein l(2)34Fc
ruditapes_c10456	sensory organ development	developmental processes	P	Myosin-VIIa (DmVIIa) (Protein crinkled)
ruditapes_c10456	bristle morphogenesis	developmental processes	P	Myosin-VIIa (DmVIIa) (Protein crinkled)
ruditapes_c10456	sensory perception of sound	other biological processes	P	Myosin-VIIa (DmVIIa) (Protein crinkled)
ruditapes_c10456	imaginal disc-derived wing vein morphogenesis	developmental processes	P	Myosin-VIIa (DmVIIa) (Protein crinkled)
ruditapes_c10456	imaginal disc-derived wing hair organization	developmental processes	P	Myosin-VIIa (DmVIIa) (Protein crinkled)
ruditapes_c10456	imaginal disc-derived wing hair organization	cell organization and biogenesis	P	Myosin-VIIa (DmVIIa) (Protein crinkled)
ruditapes_c10456	antennal morphogenesis	developmental processes	P	Myosin-VIIa (DmVIIa) (Protein crinkled)
ruditapes_c10456	actin filament-based movement	transport	P	Myosin-VIIa (DmVIIa) (Protein crinkled)
ruditapes_c10456	antennal development	developmental processes	P	Myosin-VIIa (DmVIIa) (Protein crinkled)
ruditapes_c30583	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Axin (Axis inhibition protein) (d-Axin) (dAxin)
ruditapes_c30583	multicellular organismal development	developmental processes	P	Axin (Axis inhibition protein) (d-Axin) (dAxin)
ruditapes_c30583	imaginal disc pattern formation	developmental processes	P	Axin (Axis inhibition protein) (d-Axin) (dAxin)
ruditapes_c30583	imaginal disc-derived wing morphogenesis	developmental processes	P	Axin (Axis inhibition protein) (d-Axin) (dAxin)
ruditapes_c30583	Wnt receptor signaling pathway	signal transduction	P	Axin (Axis inhibition protein) (d-Axin) (dAxin)
ruditapes_c30583	positive regulation of GTPase activity	other biological processes	P	Axin (Axis inhibition protein) (d-Axin) (dAxin)
ruditapes_c30583	oogenesis	other biological processes	P	Axin (Axis inhibition protein) (d-Axin) (dAxin)
ruditapes_c30583	"phagocytosis, engulfment"	transport	P	Axin (Axis inhibition protein) (d-Axin) (dAxin)
ruditapes_c30583	"phagocytosis, engulfment"	cell organization and biogenesis	P	Axin (Axis inhibition protein) (d-Axin) (dAxin)
ruditapes_c30583	somatic stem cell maintenance	other biological processes	P	Axin (Axis inhibition protein) (d-Axin) (dAxin)
ruditapes_c30583	eye-antennal disc morphogenesis	developmental processes	P	Axin (Axis inhibition protein) (d-Axin) (dAxin)
ruditapes_c29716	smoothened signaling pathway	signal transduction	P	Apolipophorins (Retinoid- and fatty acid-binding glycoprotein) [Cleaved into: Apolipophorin-2 (ApoL2) (Apolipophorin II); Apolipophorin-1 (ApoL1) (Apolipophorin I)]
ruditapes_c29716	Wnt receptor signaling pathway	signal transduction	P	Apolipophorins (Retinoid- and fatty acid-binding glycoprotein) [Cleaved into: Apolipophorin-2 (ApoL2) (Apolipophorin II); Apolipophorin-1 (ApoL1) (Apolipophorin I)]
ruditapes_c29716	transport	transport	P	Apolipophorins (Retinoid- and fatty acid-binding glycoprotein) [Cleaved into: Apolipophorin-2 (ApoL2) (Apolipophorin II); Apolipophorin-1 (ApoL1) (Apolipophorin I)]
ruditapes_c29716	lipid transport	transport	P	Apolipophorins (Retinoid- and fatty acid-binding glycoprotein) [Cleaved into: Apolipophorin-2 (ApoL2) (Apolipophorin II); Apolipophorin-1 (ApoL1) (Apolipophorin I)]
ruditapes_c14388	regulation of cell-cell adhesion mediated by integrin	cell adhesion	P	Protein wech (Protein dappled)
ruditapes_c14388	instar larval development	developmental processes	P	Protein wech (Protein dappled)
ruditapes_c14388	cell differentiation	other biological processes	P	Protein wech (Protein dappled)
ruditapes_c14388	multicellular organismal development	developmental processes	P	Protein wech (Protein dappled)
ruditapes_c14388	muscle organ development	developmental processes	P	Protein wech (Protein dappled)
ruditapes_c14388	muscle attachment	developmental processes	P	Protein wech (Protein dappled)
ruditapes_lrc34245	nervous system development	developmental processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	axon guidance	developmental processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	axon guidance	cell organization and biogenesis	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	startle response	other biological processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	R7 cell development	developmental processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	axon midline choice point recognition	developmental processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	gonad development	developmental processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	R3/R4 cell fate commitment	developmental processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	R3/R4 cell fate commitment	cell organization and biogenesis	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	multicellular organismal development	developmental processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	axonogenesis	cell organization and biogenesis	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	inter-male aggressive behavior	other biological processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	locomotion involved in locomotory behavior	other biological processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	"transcription, DNA-dependent"	RNA metabolism	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	cell differentiation	other biological processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	axon midline choice point recognition	cell organization and biogenesis	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	nurse cell apoptosis	death	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	brain morphogenesis	developmental processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	antimicrobial humoral response	other biological processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc34245	axonogenesis	developmental processes	P	"Longitudinals lacking protein, isoforms N/O/W/X/Y"
ruditapes_lrc9086	morphogenesis of a polarized epithelium	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	R3/R4 cell fate commitment	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	R3/R4 cell fate commitment	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	"regulation of tube length, open tracheal system"	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	establishment of planar polarity	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	mushroom body development	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	morphogenesis of a polarized epithelium	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	mushroom body development	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	establishment of ommatidial polarity	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	establishment of ommatidial polarity	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	Wnt receptor signaling pathway	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	cell surface receptor linked signal transduction	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	multicellular organismal development	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	axon guidance	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	axon guidance	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	regulation of axonogenesis	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	regulation of axonogenesis	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	G-protein coupled receptor protein signaling pathway	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	axonogenesis	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	axonogenesis	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	signal transduction	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	dendrite development	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	R3/R4 development	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	establishment of tissue polarity	other biological processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	cell adhesion	cell adhesion	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	dendrite morphogenesis	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	dendrite morphogenesis	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	neuropeptide signaling pathway	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	axon guidance	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	axon guidance	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	homophilic cell adhesion	cell adhesion	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	dendrite development	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	dendrite self-avoidance	other biological processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	dendrite morphogenesis	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	dendrite morphogenesis	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	homophilic cell adhesion	cell adhesion	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	establishment of tissue polarity	other biological processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	neuropeptide signaling pathway	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	regulation of synaptogenesis	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	regulation of synaptogenesis	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	regulation of synaptogenesis	cell-cell signaling	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	segment polarity determination	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	Wnt receptor signaling pathway	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	signal transduction	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	R3/R4 cell fate commitment	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	R3/R4 cell fate commitment	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	"regulation of tube length, open tracheal system"	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	calcium-dependent cell-cell adhesion	cell adhesion	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	multicellular organismal development	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	G-protein coupled receptor protein signaling pathway	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	dendrite development	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	dendrite development	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	establishment of planar polarity	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	positive regulation of Wnt receptor signaling pathway	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	cell surface receptor linked signal transduction	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	cell adhesion	cell adhesion	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	establishment of ommatidial polarity	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	establishment of ommatidial polarity	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	calcium-dependent cell-cell adhesion	cell adhesion	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	positive regulation of Wnt receptor signaling pathway	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	segment polarity determination	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	R3/R4 development	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	regulation of synaptogenesis	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	regulation of synaptogenesis	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	regulation of synaptogenesis	cell-cell signaling	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c17432	negative regulation of Wnt receptor signaling pathway	signal transduction	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	dendrite self-avoidance	other biological processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	axonogenesis	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	axonogenesis	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	regulation of axonogenesis	developmental processes	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_lrc9086	regulation of axonogenesis	cell organization and biogenesis	P	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)
ruditapes_c221	rRNA processing	RNA metabolism	P	H/ACA ribonucleoprotein complex subunit 3 (Nucleolar protein 10) (Nucleolar protein family A member 3) (snoRNP protein dNop10)
ruditapes_c221	ribosome biogenesis	other biological processes	P	H/ACA ribonucleoprotein complex subunit 3 (Nucleolar protein 10) (Nucleolar protein family A member 3) (snoRNP protein dNop10)
ruditapes_c3072	rRNA processing	RNA metabolism	P	H/ACA ribonucleoprotein complex subunit 3 (Nucleolar protein 10) (Nucleolar protein family A member 3) (snoRNP protein dNop10)
ruditapes_c3072	ribosome biogenesis	other biological processes	P	H/ACA ribonucleoprotein complex subunit 3 (Nucleolar protein 10) (Nucleolar protein family A member 3) (snoRNP protein dNop10)
ruditapes_c1792	rRNA processing	RNA metabolism	P	H/ACA ribonucleoprotein complex subunit 3 (Nucleolar protein 10) (Nucleolar protein family A member 3) (snoRNP protein dNop10)
ruditapes_c1792	ribosome biogenesis	other biological processes	P	H/ACA ribonucleoprotein complex subunit 3 (Nucleolar protein 10) (Nucleolar protein family A member 3) (snoRNP protein dNop10)
ruditapes_c8368	multicellular organismal development	developmental processes	P	Tyrosine-protein kinase transmembrane receptor Ror2 (dRor2) (EC 2.7.10.1) (Neurospecific receptor tyrosine kinase)
ruditapes_c23633	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase transmembrane receptor Ror2 (dRor2) (EC 2.7.10.1) (Neurospecific receptor tyrosine kinase)
ruditapes_c23633	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Tyrosine-protein kinase transmembrane receptor Ror2 (dRor2) (EC 2.7.10.1) (Neurospecific receptor tyrosine kinase)
ruditapes_c23633	multicellular organismal development	developmental processes	P	Tyrosine-protein kinase transmembrane receptor Ror2 (dRor2) (EC 2.7.10.1) (Neurospecific receptor tyrosine kinase)
ruditapes_c8368	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase transmembrane receptor Ror2 (dRor2) (EC 2.7.10.1) (Neurospecific receptor tyrosine kinase)
ruditapes_c23633	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase transmembrane receptor Ror2 (dRor2) (EC 2.7.10.1) (Neurospecific receptor tyrosine kinase)
ruditapes_c8368	signal transduction	signal transduction	P	Tyrosine-protein kinase transmembrane receptor Ror2 (dRor2) (EC 2.7.10.1) (Neurospecific receptor tyrosine kinase)
ruditapes_c23633	signal transduction	signal transduction	P	Tyrosine-protein kinase transmembrane receptor Ror2 (dRor2) (EC 2.7.10.1) (Neurospecific receptor tyrosine kinase)
ruditapes_c8368	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase transmembrane receptor Ror2 (dRor2) (EC 2.7.10.1) (Neurospecific receptor tyrosine kinase)
ruditapes_c8368	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Tyrosine-protein kinase transmembrane receptor Ror2 (dRor2) (EC 2.7.10.1) (Neurospecific receptor tyrosine kinase)
ruditapes_s38041	protein neddylation	protein metabolism	P	NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-) (Ubiquitin-activating enzyme 3 homolog)
ruditapes_s38041	protein modification process	protein metabolism	P	NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-) (Ubiquitin-activating enzyme 3 homolog)
ruditapes_c27470	regulation of anti-apoptosis	death	P	Stress-activated map kinase-interacting protein 1 (SAPK-interacting protein 1) (dSin1)
ruditapes_c27470	regulation of protein amino acid phosphorylation	protein metabolism	P	Stress-activated map kinase-interacting protein 1 (SAPK-interacting protein 1) (dSin1)
ruditapes_c27470	dendrite morphogenesis	developmental processes	P	Stress-activated map kinase-interacting protein 1 (SAPK-interacting protein 1) (dSin1)
ruditapes_c27470	dendrite morphogenesis	cell organization and biogenesis	P	Stress-activated map kinase-interacting protein 1 (SAPK-interacting protein 1) (dSin1)
ruditapes_c27470	apoptosis	death	P	Stress-activated map kinase-interacting protein 1 (SAPK-interacting protein 1) (dSin1)
ruditapes_c12182	mRNA processing	RNA metabolism	P	Cleavage and polyadenylation specificity factor subunit 1 (Cleavage and polyadenylation specificity factor 160 kDa subunit) (CPSF 160 kDa subunit) (dCPSF 160)
ruditapes_c26999	multicellular organismal development	developmental processes	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	regulation of smoothened signaling pathway	signal transduction	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	heparan sulfate proteoglycan biosynthetic process	other metabolic processes	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	synapse organization	cell organization and biogenesis	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	"heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process"	other metabolic processes	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	heparin biosynthetic process	other metabolic processes	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	germ cell migration	other biological processes	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	Wnt receptor signaling pathway	signal transduction	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	N-acetylglucosamine metabolic process	other metabolic processes	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	smoothened signaling pathway	signal transduction	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	decapentaplegic receptor signaling pathway	signal transduction	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	synaptic vesicle endocytosis	transport	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	synaptic vesicle endocytosis	cell organization and biogenesis	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	intracellular distribution of mitochondria	cell organization and biogenesis	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c26999	glycosaminoglycan biosynthetic process	other metabolic processes	P	Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein tout-velu)
ruditapes_c23678	decapentaplegic receptor signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Lethal with a checkpoint kinase protein) (SMAD ubiquitination regulatory factor 1 homolog) (DSmurf)
ruditapes_c23678	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Lethal with a checkpoint kinase protein) (SMAD ubiquitination regulatory factor 1 homolog) (DSmurf)
ruditapes_c23678	regulation of growth	other biological processes	P	E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Lethal with a checkpoint kinase protein) (SMAD ubiquitination regulatory factor 1 homolog) (DSmurf)
ruditapes_c23678	embryonic development via the syncytial blastoderm	developmental processes	P	E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Lethal with a checkpoint kinase protein) (SMAD ubiquitination regulatory factor 1 homolog) (DSmurf)
ruditapes_c23678	protein modification process	protein metabolism	P	E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Lethal with a checkpoint kinase protein) (SMAD ubiquitination regulatory factor 1 homolog) (DSmurf)
ruditapes_c23678	embryonic hindgut morphogenesis	developmental processes	P	E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Lethal with a checkpoint kinase protein) (SMAD ubiquitination regulatory factor 1 homolog) (DSmurf)
ruditapes_c23678	multicellular organismal development	developmental processes	P	E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Lethal with a checkpoint kinase protein) (SMAD ubiquitination regulatory factor 1 homolog) (DSmurf)
ruditapes_c23678	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Lethal with a checkpoint kinase protein) (SMAD ubiquitination regulatory factor 1 homolog) (DSmurf)
ruditapes_c27727	proteolysis	protein metabolism	P	"Presequence protease, mitochondrial (EC 3.4.24.-)"
ruditapes_c21336	dorsal closure	developmental processes	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	peptidyl-tyrosine phosphorylation	protein metabolism	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	negative regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	protein amino acid phosphorylation	protein metabolism	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	JNK cascade	signal transduction	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	JNK cascade	stress response	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	apoptotic cell clearance	transport	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	apoptotic cell clearance	cell organization and biogenesis	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	salivary gland morphogenesis	developmental processes	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	"dorsal closure, spreading of leading edge cells"	developmental processes	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	tricarboxylic acid cycle	other metabolic processes	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	compound eye development	developmental processes	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	multicellular organismal development	developmental processes	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	imaginal disc-derived wing morphogenesis	developmental processes	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	open tracheal system development	developmental processes	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	"imaginal disc fusion, thorax closure"	developmental processes	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	actin filament bundle formation	cell organization and biogenesis	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c21336	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase Src42A (EC 2.7.10.2) (Tyrosine-protein kinase Src41) (Dsrc41)
ruditapes_c19019	transport	transport	P	Calcium-binding mitochondrial carrier protein Aralar1
ruditapes_c19019	transmembrane transport	transport	P	Calcium-binding mitochondrial carrier protein Aralar1
ruditapes_c22343	autophagic cell death	death	P	General odorant-binding protein 99b
ruditapes_c22343	response to pheromone	other biological processes	P	General odorant-binding protein 99b
ruditapes_c22343	response to stimulus	other biological processes	P	General odorant-binding protein 99b
ruditapes_c22343	transport	transport	P	General odorant-binding protein 99b
ruditapes_c22343	sensory perception of smell	other biological processes	P	General odorant-binding protein 99b
ruditapes_c22343	olfactory behavior	other biological processes	P	General odorant-binding protein 99b
ruditapes_c22343	salivary gland cell autophagic cell death	developmental processes	P	General odorant-binding protein 99b
ruditapes_c22343	salivary gland cell autophagic cell death	death	P	General odorant-binding protein 99b
ruditapes_c9501	metabolic process	other metabolic processes	P	Probable phosphoserine aminotransferase (PSAT) (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase)
ruditapes_c9501	cellular amino acid biosynthetic process	other metabolic processes	P	Probable phosphoserine aminotransferase (PSAT) (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase)
ruditapes_c9501	L-serine biosynthetic process	other metabolic processes	P	Probable phosphoserine aminotransferase (PSAT) (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase)
ruditapes_c21424	nuclear mRNA 3'-splice site recognition	RNA metabolism	P	Pre-mRNA-splicing factor Slu7
ruditapes_c21424	nuclear mRNA 3'-splice site recognition	cell organization and biogenesis	P	Pre-mRNA-splicing factor Slu7
ruditapes_c21424	RNA splicing	RNA metabolism	P	Pre-mRNA-splicing factor Slu7
ruditapes_c21424	mitotic spindle organization	cell cycle and proliferation	P	Pre-mRNA-splicing factor Slu7
ruditapes_c21424	mitotic spindle organization	cell organization and biogenesis	P	Pre-mRNA-splicing factor Slu7
ruditapes_c21424	mRNA processing	RNA metabolism	P	Pre-mRNA-splicing factor Slu7
ruditapes2_lrc4818	signal transduction	signal transduction	P	Putative odorant receptor 98a
ruditapes2_lrc4818	response to stimulus	other biological processes	P	Putative odorant receptor 98a
ruditapes2_lrc4818	detection of chemical stimulus involved in sensory perception of smell	other biological processes	P	Putative odorant receptor 98a
ruditapes2_lrc4818	sensory perception of smell	other biological processes	P	Putative odorant receptor 98a
ruditapes2_lrc4818	G-protein coupled receptor protein signaling pathway	signal transduction	P	Putative odorant receptor 98a
ruditapes_lrc10018	cation homeostasis	other biological processes	P	Protein unc-80 homolog
ruditapes_c27190	oxidation reduction	other metabolic processes	P	Probable cytochrome P450 6a18 (EC 1.14.-.-) (CYPVIA18)
ruditapes_c8194	protein export from nucleus	transport	P	Nuclear export mediator factor NEMF homolog (Protein Caliban)
ruditapes_c27370	transmembrane transport	transport	P	Organic cation transporter protein
ruditapes_c27370	apoptosis	death	P	Organic cation transporter protein
ruditapes_c27370	ion transport	transport	P	Organic cation transporter protein
ruditapes_c27370	transport	transport	P	Organic cation transporter protein
ruditapes_c12418	antimicrobial humoral response	other biological processes	P	Ankyrin repeat and KH domain-containing protein mask (Multiple ankyrin repeat single KH domain-containing protein)
ruditapes_c12418	compound eye photoreceptor cell differentiation	developmental processes	P	Ankyrin repeat and KH domain-containing protein mask (Multiple ankyrin repeat single KH domain-containing protein)
ruditapes_c12418	transmembrane receptor protein tyrosine kinase signaling pathway	signal transduction	P	Ankyrin repeat and KH domain-containing protein mask (Multiple ankyrin repeat single KH domain-containing protein)
ruditapes_c12418	multicellular organismal development	developmental processes	P	Ankyrin repeat and KH domain-containing protein mask (Multiple ankyrin repeat single KH domain-containing protein)
ruditapes_c12418	cellular process	other biological processes	P	Ankyrin repeat and KH domain-containing protein mask (Multiple ankyrin repeat single KH domain-containing protein)
ruditapes2_c958	translation	protein metabolism	P	"28S ribosomal protein S24, mitochondrial (MRP-S24) (S24mt)"
ruditapes_c15563	translation	protein metabolism	P	"28S ribosomal protein S24, mitochondrial (MRP-S24) (S24mt)"
ruditapes_c16208	bristle development	developmental processes	P	Probable cytochrome P450 6d4 (EC 1.14.-.-) (CYPVID4)
ruditapes_c16208	oxidation reduction	other metabolic processes	P	Probable cytochrome P450 6d4 (EC 1.14.-.-) (CYPVID4)
ruditapes_c16208	wing disc development	developmental processes	P	Probable cytochrome P450 6d4 (EC 1.14.-.-) (CYPVID4)
ruditapes_c17353	DNA repair	stress response	P	Putative DNA helicase Ino80 (dINO80) (EC 3.6.4.12)
ruditapes_c17353	DNA repair	DNA metabolism	P	Putative DNA helicase Ino80 (dINO80) (EC 3.6.4.12)
ruditapes_c17353	chromatin remodeling	cell organization and biogenesis	P	Putative DNA helicase Ino80 (dINO80) (EC 3.6.4.12)
ruditapes_c17353	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative DNA helicase Ino80 (dINO80) (EC 3.6.4.12)
ruditapes_c17353	"transcription, DNA-dependent"	RNA metabolism	P	Putative DNA helicase Ino80 (dINO80) (EC 3.6.4.12)
ruditapes_c17353	chromatin modification	cell organization and biogenesis	P	Putative DNA helicase Ino80 (dINO80) (EC 3.6.4.12)
ruditapes_c17353	regulation of gene expression	other metabolic processes	P	Putative DNA helicase Ino80 (dINO80) (EC 3.6.4.12)
ruditapes_c17353	ATP catabolic process	other metabolic processes	P	Putative DNA helicase Ino80 (dINO80) (EC 3.6.4.12)
ruditapes_c17353	response to DNA damage stimulus	stress response	P	Putative DNA helicase Ino80 (dINO80) (EC 3.6.4.12)
ruditapes_c17353	DNA recombination	DNA metabolism	P	Putative DNA helicase Ino80 (dINO80) (EC 3.6.4.12)
ruditapes_c18610	response to DNA damage stimulus	stress response	P	Actin-related protein 5
ruditapes_c18610	"transcription, DNA-dependent"	RNA metabolism	P	Actin-related protein 5
ruditapes_c18610	DNA repair	stress response	P	Actin-related protein 5
ruditapes_c18610	DNA repair	DNA metabolism	P	Actin-related protein 5
ruditapes_c18610	DNA recombination	DNA metabolism	P	Actin-related protein 5
ruditapes_c18610	chromatin remodeling	cell organization and biogenesis	P	Actin-related protein 5
ruditapes_c18610	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Actin-related protein 5
ruditapes_c24384	transport	transport	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes_c24384	multicellular organismal development	developmental processes	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes_c24384	transmembrane transport	transport	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes2_c3031	transmembrane transport	transport	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes2_c3031	oocyte dorsal/ventral axis specification	cell organization and biogenesis	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes2_c3031	transport	transport	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes_c24384	3'-phosphoadenosine 5'-phosphosulfate transport	transport	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes_c24384	oocyte dorsal/ventral axis specification	developmental processes	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes_c24384	oocyte dorsal/ventral axis specification	cell organization and biogenesis	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes2_c3031	3'-phosphoadenosine 5'-phosphosulfate transport	transport	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes2_c3031	multicellular organismal development	developmental processes	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes2_c3031	oocyte dorsal/ventral axis specification	developmental processes	P	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Protein slalom)
ruditapes_c14057	rRNA processing	RNA metabolism	P	Nucleolar protein 14 homolog (Nucleolar complex protein 14 homolog)
ruditapes_c14057	ribosome biogenesis	other biological processes	P	Nucleolar protein 14 homolog (Nucleolar complex protein 14 homolog)
ruditapes_c14057	ribosomal small subunit biogenesis	other biological processes	P	Nucleolar protein 14 homolog (Nucleolar complex protein 14 homolog)
ruditapes2_c2208	ring canal formation	cell organization and biogenesis	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	learning or memory	other biological processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	germarium-derived female germ-line cyst encapsulation	developmental processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	ovarian ring canal formation	transport	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	ovarian ring canal formation	cell organization and biogenesis	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	mitosis	cell cycle and proliferation	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	determination of adult life span	developmental processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	negative regulation of lamellocyte differentiation	developmental processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	"ring canal formation, actin assembly"	transport	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	"ring canal formation, actin assembly"	cell organization and biogenesis	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	learning or memory	other biological processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	protein localization	other biological processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	olfactory learning	other biological processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	negative regulation of lamellocyte differentiation	developmental processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	ovarian ring canal formation	transport	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	ovarian ring canal formation	cell organization and biogenesis	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	"ring canal formation, actin assembly"	transport	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	"ring canal formation, actin assembly"	cell organization and biogenesis	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	olfactory learning	other biological processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	germarium-derived female germ-line cyst encapsulation	developmental processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	mitosis	cell organization and biogenesis	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	mitosis	cell cycle and proliferation	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	mitosis	cell organization and biogenesis	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2712	ring canal formation	cell organization and biogenesis	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	protein localization	other biological processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes2_c2208	determination of adult life span	developmental processes	P	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)
ruditapes_c21346	rRNA processing	RNA metabolism	P	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 1 (EC 2.1.1.205) (2'-O-ribose RNA methyltransferase TRM7 homolog 1)
ruditapes_c21346	methylation	other metabolic processes	P	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 1 (EC 2.1.1.205) (2'-O-ribose RNA methyltransferase TRM7 homolog 1)
ruditapes_c21346	RNA methylation	RNA metabolism	P	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 1 (EC 2.1.1.205) (2'-O-ribose RNA methyltransferase TRM7 homolog 1)
ruditapes_lrc32989	biological_process	other biological processes	P	Putative SERF-like protein
ruditapes2_c6400	biological_process	other biological processes	P	Putative SERF-like protein
ruditapes_lrc36603	biological_process	other biological processes	P	Putative SERF-like protein
ruditapes_lrc34802	biological_process	other biological processes	P	Putative SERF-like protein
ruditapes_c4711	chromatin silencing	RNA metabolism	P	Histone deacetylase complex subunit SAP18 (18 kDa Sin3-associated polypeptide) (Bicoid-interacting protein 1) (dSAP18)
ruditapes_c4711	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase complex subunit SAP18 (18 kDa Sin3-associated polypeptide) (Bicoid-interacting protein 1) (dSAP18)
ruditapes_c4711	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase complex subunit SAP18 (18 kDa Sin3-associated polypeptide) (Bicoid-interacting protein 1) (dSAP18)
ruditapes_c4711	"transcription, DNA-dependent"	RNA metabolism	P	Histone deacetylase complex subunit SAP18 (18 kDa Sin3-associated polypeptide) (Bicoid-interacting protein 1) (dSAP18)
ruditapes_c4711	multicellular organismal development	developmental processes	P	Histone deacetylase complex subunit SAP18 (18 kDa Sin3-associated polypeptide) (Bicoid-interacting protein 1) (dSAP18)
ruditapes_c4711	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Histone deacetylase complex subunit SAP18 (18 kDa Sin3-associated polypeptide) (Bicoid-interacting protein 1) (dSAP18)
ruditapes_c29941	nervous system development	developmental processes	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	multicellular organismal development	developmental processes	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	regulation of synapse organization	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	regulation of synapse organization	cell-cell signaling	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	bristle development	developmental processes	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	cortical actin cytoskeleton organization	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	axon guidance	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	"phagocytosis, engulfment"	transport	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	"phagocytosis, engulfment"	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	cell differentiation	other biological processes	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	cell projection assembly	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	regulation of cell shape	cell organization and biogenesis	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes_c29941	axon guidance	developmental processes	P	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (DSra-1)
ruditapes2_c504	regulation of translation	protein metabolism	P	"39S ribosomal protein L11, mitochondrial (L11mt) (MRP-L11)"
ruditapes2_c504	translation	protein metabolism	P	"39S ribosomal protein L11, mitochondrial (L11mt) (MRP-L11)"
ruditapes2_c504	gene silencing by RNA	other metabolic processes	P	"39S ribosomal protein L11, mitochondrial (L11mt) (MRP-L11)"
ruditapes_c31457	oxidation reduction	other metabolic processes	P	Probable cytochrome P450 313a5 (EC 1.14.-.-) (CYPCCCXIIIA5)
ruditapes_c20420	calcium-dependent cell-cell adhesion	cell adhesion	P	Cadherin-87A
ruditapes_c20420	homophilic cell adhesion	cell adhesion	P	Cadherin-87A
ruditapes_c20420	cell adhesion	cell adhesion	P	Cadherin-87A
ruditapes2_c2732	DNA replication initiation	DNA metabolism	P	DNA replication licensing factor Mcm5 (EC 3.6.4.12) (Minichromosome maintenance 5 protein) (DmMCM5)
ruditapes2_c2732	DNA endoreduplication	DNA metabolism	P	DNA replication licensing factor Mcm5 (EC 3.6.4.12) (Minichromosome maintenance 5 protein) (DmMCM5)
ruditapes2_c2732	chromosome condensation	cell organization and biogenesis	P	DNA replication licensing factor Mcm5 (EC 3.6.4.12) (Minichromosome maintenance 5 protein) (DmMCM5)
ruditapes2_c2732	DNA endoreduplication	cell cycle and proliferation	P	DNA replication licensing factor Mcm5 (EC 3.6.4.12) (Minichromosome maintenance 5 protein) (DmMCM5)
ruditapes2_c2732	resolution of meiotic joint molecules as recombinants	cell cycle and proliferation	P	DNA replication licensing factor Mcm5 (EC 3.6.4.12) (Minichromosome maintenance 5 protein) (DmMCM5)
ruditapes2_c2732	resolution of meiotic joint molecules as recombinants	DNA metabolism	P	DNA replication licensing factor Mcm5 (EC 3.6.4.12) (Minichromosome maintenance 5 protein) (DmMCM5)
ruditapes2_c2732	DNA replication	DNA metabolism	P	DNA replication licensing factor Mcm5 (EC 3.6.4.12) (Minichromosome maintenance 5 protein) (DmMCM5)
ruditapes2_c2732	meiosis	cell cycle and proliferation	P	DNA replication licensing factor Mcm5 (EC 3.6.4.12) (Minichromosome maintenance 5 protein) (DmMCM5)
ruditapes2_c2732	cell cycle	cell cycle and proliferation	P	DNA replication licensing factor Mcm5 (EC 3.6.4.12) (Minichromosome maintenance 5 protein) (DmMCM5)
ruditapes_c15609	mitotic spindle organization	cell cycle and proliferation	P	Probable splicing factor 3B subunit 5 (SF3b5) (Pre-mRNA-splicing factor SF3b 10 kDa subunit)
ruditapes_c15609	mitotic spindle organization	cell organization and biogenesis	P	Probable splicing factor 3B subunit 5 (SF3b5) (Pre-mRNA-splicing factor SF3b 10 kDa subunit)
ruditapes_c15609	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Probable splicing factor 3B subunit 5 (SF3b5) (Pre-mRNA-splicing factor SF3b 10 kDa subunit)
ruditapes_c15609	mRNA processing	RNA metabolism	P	Probable splicing factor 3B subunit 5 (SF3b5) (Pre-mRNA-splicing factor SF3b 10 kDa subunit)
ruditapes_c15609	RNA splicing	RNA metabolism	P	Probable splicing factor 3B subunit 5 (SF3b5) (Pre-mRNA-splicing factor SF3b 10 kDa subunit)
ruditapes2_c1843	translation	protein metabolism	P	"39S ribosomal protein L19, mitochondrial (L19mt) (MRP-L19)"
ruditapes_lrc37420	mitosis	cell cycle and proliferation	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc37420	mitosis	cell organization and biogenesis	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc37420	RNA splicing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc37420	mRNA processing	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc37420	mitotic spindle organization	cell cycle and proliferation	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc37420	mitotic spindle organization	cell organization and biogenesis	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_lrc37420	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Probable small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
ruditapes_c23151	Golgi organization	cell organization and biogenesis	P	Transport and Golgi organization 6
ruditapes_c23151	protein secretion	transport	P	Transport and Golgi organization 6
ruditapes_c23151	mitotic cell cycle G2/M transition DNA damage checkpoint	cell cycle and proliferation	P	Transport and Golgi organization 6
ruditapes_c23151	mitotic cell cycle G2/M transition DNA damage checkpoint	signal transduction	P	Transport and Golgi organization 6
ruditapes_c23151	mitotic cell cycle G2/M transition DNA damage checkpoint	stress response	P	Transport and Golgi organization 6
ruditapes_c25682	translation	protein metabolism	P	"39S ribosomal protein L13, mitochondrial (L13mt) (MRP-L13)"
ruditapes_c29933	cellularization	developmental processes	P	Restin homolog (Cytoplasmic linker protein 190) (Microtubule-binding protein 190) (d-CLIP-190)
ruditapes_c10437	response to DNA damage stimulus	stress response	P	PITH domain-containing protein CG6153
ruditapes2_c6146	translation	protein metabolism	P	Probable elongation factor 1-delta (EF-1-delta)
ruditapes2_c6146	translational elongation	protein metabolism	P	Probable elongation factor 1-delta (EF-1-delta)
ruditapes_c21433	heart development	developmental processes	P	ATP-binding cassette sub-family C member Sur (Sulfonylurea receptor) (Dsur)
ruditapes_c21433	ATP catabolic process	other metabolic processes	P	ATP-binding cassette sub-family C member Sur (Sulfonylurea receptor) (Dsur)
ruditapes_c21433	transport	transport	P	ATP-binding cassette sub-family C member Sur (Sulfonylurea receptor) (Dsur)
ruditapes_c21433	transmembrane transport	transport	P	ATP-binding cassette sub-family C member Sur (Sulfonylurea receptor) (Dsur)
ruditapes_c21433	response to hypoxia	stress response	P	ATP-binding cassette sub-family C member Sur (Sulfonylurea receptor) (Dsur)
ruditapes_c22960	proteolysis	protein metabolism	P	Zinc carboxypeptidase A 1 (EC 3.4.17.-)
ruditapes_c21280	protein transport	transport	P	Vacuolar protein sorting-associated protein 54 (Protein scattered)
ruditapes_c21280	Golgi to vacuole transport	transport	P	Vacuolar protein sorting-associated protein 54 (Protein scattered)
ruditapes_c21280	spermatogenesis	other biological processes	P	Vacuolar protein sorting-associated protein 54 (Protein scattered)
ruditapes_c21280	sperm individualization	developmental processes	P	Vacuolar protein sorting-associated protein 54 (Protein scattered)
ruditapes_c21280	spermatid development	other biological processes	P	Vacuolar protein sorting-associated protein 54 (Protein scattered)
ruditapes_c21280	transport	transport	P	Vacuolar protein sorting-associated protein 54 (Protein scattered)
ruditapes_c21280	cell differentiation	other biological processes	P	Vacuolar protein sorting-associated protein 54 (Protein scattered)
ruditapes_c21280	multicellular organismal development	developmental processes	P	Vacuolar protein sorting-associated protein 54 (Protein scattered)
ruditapes_c21280	"retrograde transport, endosome to Golgi"	transport	P	Vacuolar protein sorting-associated protein 54 (Protein scattered)
ruditapes_c4078	translation	protein metabolism	P	"39S ribosomal protein L51, mitochondrial (L51mt) (MRP-L51)"
ruditapes_c38940	translation	protein metabolism	P	"39S ribosomal protein L51, mitochondrial (L51mt) (MRP-L51)"
ruditapes_c36269	translation	protein metabolism	P	"39S ribosomal protein L51, mitochondrial (L51mt) (MRP-L51)"
ruditapes2_lrc6572	translation	protein metabolism	P	"39S ribosomal protein L51, mitochondrial (L51mt) (MRP-L51)"
ruditapes2_c3598	translation	protein metabolism	P	"39S ribosomal protein L51, mitochondrial (L51mt) (MRP-L51)"
ruditapes_c18265	translation	protein metabolism	P	Ribosomal L1 domain-containing protein CG13096
ruditapes_c18265	biological_process	other biological processes	P	Ribosomal L1 domain-containing protein CG13096
ruditapes2_c6721	spermatid development	other biological processes	P	Protein purity of essence (Interaction calmodulin and colossal molecular mass protein) (Protein Calossin) (Protein pushover)
ruditapes2_c6721	perineurial glial growth	developmental processes	P	Protein purity of essence (Interaction calmodulin and colossal molecular mass protein) (Protein Calossin) (Protein pushover)
ruditapes2_c6721	sperm individualization	developmental processes	P	Protein purity of essence (Interaction calmodulin and colossal molecular mass protein) (Protein Calossin) (Protein pushover)
ruditapes2_c6721	response to stimulus	other biological processes	P	Protein purity of essence (Interaction calmodulin and colossal molecular mass protein) (Protein Calossin) (Protein pushover)
ruditapes2_c6721	visual perception	other biological processes	P	Protein purity of essence (Interaction calmodulin and colossal molecular mass protein) (Protein Calossin) (Protein pushover)
ruditapes2_c6721	glial cell growth	developmental processes	P	Protein purity of essence (Interaction calmodulin and colossal molecular mass protein) (Protein Calossin) (Protein pushover)
ruditapes2_c6721	cell differentiation	other biological processes	P	Protein purity of essence (Interaction calmodulin and colossal molecular mass protein) (Protein Calossin) (Protein pushover)
ruditapes2_c6721	nervous system development	developmental processes	P	Protein purity of essence (Interaction calmodulin and colossal molecular mass protein) (Protein Calossin) (Protein pushover)
ruditapes2_c6721	multicellular organismal development	developmental processes	P	Protein purity of essence (Interaction calmodulin and colossal molecular mass protein) (Protein Calossin) (Protein pushover)
ruditapes2_c6721	protein ubiquitination	protein metabolism	P	Protein purity of essence (Interaction calmodulin and colossal molecular mass protein) (Protein Calossin) (Protein pushover)
ruditapes_c14766	cell division	other biological processes	P	Mini-chromosome maintenance complex-binding protein (MCM-BP) (MCM-binding protein)
ruditapes_c14766	DNA replication	DNA metabolism	P	Mini-chromosome maintenance complex-binding protein (MCM-BP) (MCM-binding protein)
ruditapes_c14766	cell cycle	cell cycle and proliferation	P	Mini-chromosome maintenance complex-binding protein (MCM-BP) (MCM-binding protein)
ruditapes_c14766	biological_process	other biological processes	P	Mini-chromosome maintenance complex-binding protein (MCM-BP) (MCM-binding protein)
ruditapes_c14766	mitosis	cell cycle and proliferation	P	Mini-chromosome maintenance complex-binding protein (MCM-BP) (MCM-binding protein)
ruditapes_c14766	mitosis	cell organization and biogenesis	P	Mini-chromosome maintenance complex-binding protein (MCM-BP) (MCM-binding protein)
ruditapes_c577	transport	transport	P	Protein real-time
ruditapes_c577	biological_process	other biological processes	P	Protein real-time
ruditapes_c21121	metabolic process	other metabolic processes	P	Putative ubiquinone biosynthesis monooxygenase COQ6 (EC 1.14.13.-)
ruditapes_c21121	oxidation reduction	other metabolic processes	P	Putative ubiquinone biosynthesis monooxygenase COQ6 (EC 1.14.13.-)
ruditapes_c21121	ubiquinone biosynthetic process	other metabolic processes	P	Putative ubiquinone biosynthesis monooxygenase COQ6 (EC 1.14.13.-)
ruditapes_c1994	mitochondrial transport	transport	P	Protein KBP homolog
ruditapes_c28905	calcium ion transport	transport	P	Probable sodium/potassium/calcium exchanger CG1090 (Na(+)/K(+)/Ca(2+)-exchange protein CG1090)
ruditapes_c28905	potassium ion transport	transport	P	Probable sodium/potassium/calcium exchanger CG1090 (Na(+)/K(+)/Ca(2+)-exchange protein CG1090)
ruditapes_c28905	sodium ion transport	transport	P	Probable sodium/potassium/calcium exchanger CG1090 (Na(+)/K(+)/Ca(2+)-exchange protein CG1090)
ruditapes_c28905	transport	transport	P	Probable sodium/potassium/calcium exchanger CG1090 (Na(+)/K(+)/Ca(2+)-exchange protein CG1090)
ruditapes_c28905	ion transport	transport	P	Probable sodium/potassium/calcium exchanger CG1090 (Na(+)/K(+)/Ca(2+)-exchange protein CG1090)
ruditapes_c28905	transmembrane transport	transport	P	Probable sodium/potassium/calcium exchanger CG1090 (Na(+)/K(+)/Ca(2+)-exchange protein CG1090)
ruditapes_c8897	cell adhesion	cell adhesion	P	Contactin
ruditapes_c8897	axon ensheathment	developmental processes	P	Contactin
ruditapes_c8897	nerve maturation	developmental processes	P	Contactin
ruditapes_c8897	septate junction assembly	cell organization and biogenesis	P	Contactin
ruditapes_c8897	establishment or maintenance of epithelial cell apical/basal polarity	cell organization and biogenesis	P	Contactin
ruditapes_c13880	biological_process	other biological processes	P	Transmembrane protein 104 homolog
ruditapes_c30399	translation	protein metabolism	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1)
ruditapes_c30399	translational termination	protein metabolism	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1)
ruditapes_c30399	translational termination	cell organization and biogenesis	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1)
ruditapes_c30399	autophagic cell death	death	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1)
ruditapes_c30399	salivary gland cell autophagic cell death	developmental processes	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1)
ruditapes_c30399	salivary gland cell autophagic cell death	death	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1)
ruditapes_c30399	smoothened signaling pathway	signal transduction	P	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1)
ruditapes_c18738	ribosome biogenesis	other biological processes	P	"39S ribosomal protein L10, mitochondrial (L10mt) (MRP-L10)"
ruditapes_c18738	translation	protein metabolism	P	"39S ribosomal protein L10, mitochondrial (L10mt) (MRP-L10)"
ruditapes_c21897	wing disc development	developmental processes	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	oxidation reduction	other metabolic processes	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	hydrogen peroxide catabolic process	stress response	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	hydrogen peroxide catabolic process	other metabolic processes	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	mucosal immune response	other biological processes	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	defense response to bacterium	stress response	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	cytokine-mediated signaling pathway	signal transduction	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	adult chitin-based cuticle development	developmental processes	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	response to cAMP	other biological processes	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	negative regulation of apoptosis	death	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	adult chitin-containing cuticle pigmentation	developmental processes	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	response to oxidative stress	stress response	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c21897	cuticle development	developmental processes	P	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)
ruditapes_c23219	nicotinate nucleotide salvage	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c23219	NAD biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c23219	pyridine nucleotide biosynthetic process	other metabolic processes	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c23219	response to oxidative stress	stress response	P	Nicotinate phosphoribosyltransferase (NAPRTase) (EC 2.4.2.11)
ruditapes_c23161	protein ubiquitination during ubiquitin-dependent protein catabolic process	protein metabolism	P	Probable E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes_c23161	protein modification process	protein metabolism	P	Probable E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes_c23161	protein ubiquitination	protein metabolism	P	Probable E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2)
ruditapes_c18344	Notch signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)
ruditapes_c18344	chromatin modification	cell organization and biogenesis	P	E3 ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)
ruditapes_c18344	protein monoubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)
ruditapes_c18344	"phagocytosis, engulfment"	transport	P	E3 ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)
ruditapes_c18344	"phagocytosis, engulfment"	cell organization and biogenesis	P	E3 ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)
ruditapes_c18344	histone modification	protein metabolism	P	E3 ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)
ruditapes_c18344	histone modification	cell organization and biogenesis	P	E3 ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)
ruditapes_c18344	histone ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)
ruditapes_c18344	histone ubiquitination	cell organization and biogenesis	P	E3 ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)
ruditapes2_c697	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Pre-mRNA branch site p14-like protein
ruditapes2_c697	mRNA processing	RNA metabolism	P	Pre-mRNA branch site p14-like protein
ruditapes2_c697	mitotic spindle organization	cell cycle and proliferation	P	Pre-mRNA branch site p14-like protein
ruditapes2_c697	mitotic spindle organization	cell organization and biogenesis	P	Pre-mRNA branch site p14-like protein
ruditapes2_c697	RNA splicing	RNA metabolism	P	Pre-mRNA branch site p14-like protein
ruditapes_c1338	mesodermal cell fate commitment	developmental processes	P	Forkhead box protein biniou (Forkhead box protein FoxF) (DmFoxF)
ruditapes_c1338	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Forkhead box protein biniou (Forkhead box protein FoxF) (DmFoxF)
ruditapes_c1338	pattern specification process	developmental processes	P	Forkhead box protein biniou (Forkhead box protein FoxF) (DmFoxF)
ruditapes_c1338	regulation of transcription factor activity	RNA metabolism	P	Forkhead box protein biniou (Forkhead box protein FoxF) (DmFoxF)
ruditapes_c1338	salivary gland morphogenesis	developmental processes	P	Forkhead box protein biniou (Forkhead box protein FoxF) (DmFoxF)
ruditapes_c1338	"transcription, DNA-dependent"	RNA metabolism	P	Forkhead box protein biniou (Forkhead box protein FoxF) (DmFoxF)
ruditapes_c1338	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Forkhead box protein biniou (Forkhead box protein FoxF) (DmFoxF)
ruditapes2_c2108	metabolic process	other metabolic processes	P	Protein melted
ruditapes2_c2108	ectoderm development	developmental processes	P	Protein melted
ruditapes2_c2108	peripheral nervous system development	developmental processes	P	Protein melted
ruditapes2_c2108	R8 cell fate specification	developmental processes	P	Protein melted
ruditapes2_c2108	sequestering of triglyceride	other biological processes	P	Protein melted
ruditapes2_c2108	lipid metabolic process	other metabolic processes	P	Protein melted
ruditapes2_c2108	insulin receptor signaling pathway	signal transduction	P	Protein melted
ruditapes2_c2108	multicellular organismal development	developmental processes	P	Protein melted
ruditapes_c8167	muscle organ development	developmental processes	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4) (dp34)
ruditapes_c8167	transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4) (dp34)
ruditapes_c8167	dendrite morphogenesis	developmental processes	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4) (dp34)
ruditapes_c8167	dendrite morphogenesis	cell organization and biogenesis	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4) (dp34)
ruditapes_c8167	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4) (dp34)
ruditapes_c8167	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4) (dp34)
ruditapes_c8167	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4) (dp34)
ruditapes_c8167	mitotic cell cycle G2/M transition DNA damage checkpoint	cell cycle and proliferation	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4) (dp34)
ruditapes_c8167	mitotic cell cycle G2/M transition DNA damage checkpoint	signal transduction	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4) (dp34)
ruditapes_c8167	mitotic cell cycle G2/M transition DNA damage checkpoint	stress response	P	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4) (dp34)
ruditapes_c23035	cell surface receptor linked signal transduction	signal transduction	P	Probable G-protein coupled receptor Mth-like 6 (Protein methuselah-like 6)
ruditapes_c23035	determination of adult life span	developmental processes	P	Probable G-protein coupled receptor Mth-like 6 (Protein methuselah-like 6)
ruditapes_c23035	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor Mth-like 6 (Protein methuselah-like 6)
ruditapes_c17175	response to stress	stress response	P	Probable G-protein coupled receptor Mth-like 6 (Protein methuselah-like 6)
ruditapes_c23035	response to stress	stress response	P	Probable G-protein coupled receptor Mth-like 6 (Protein methuselah-like 6)
ruditapes_c17175	signal transduction	signal transduction	P	Probable G-protein coupled receptor Mth-like 6 (Protein methuselah-like 6)
ruditapes_c17175	determination of adult life span	developmental processes	P	Probable G-protein coupled receptor Mth-like 6 (Protein methuselah-like 6)
ruditapes_c23035	signal transduction	signal transduction	P	Probable G-protein coupled receptor Mth-like 6 (Protein methuselah-like 6)
ruditapes_c17175	cell surface receptor linked signal transduction	signal transduction	P	Probable G-protein coupled receptor Mth-like 6 (Protein methuselah-like 6)
ruditapes_c17175	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor Mth-like 6 (Protein methuselah-like 6)
ruditapes_c28257	signal transduction	signal transduction	P	Putative gustatory receptor 66a
ruditapes_c28257	sensory perception of taste	other biological processes	P	Putative gustatory receptor 66a
ruditapes_c28257	response to caffeine	other biological processes	P	Putative gustatory receptor 66a
ruditapes_c28257	G-protein coupled receptor protein signaling pathway	signal transduction	P	Putative gustatory receptor 66a
ruditapes_c28257	detection of chemical stimulus involved in sensory perception of taste	other biological processes	P	Putative gustatory receptor 66a
ruditapes_c14036	positive regulation of protein kinase activity	other metabolic processes	P	Protein furry
ruditapes_c14036	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein furry
ruditapes_c14036	regulation of dendrite development	developmental processes	P	Protein furry
ruditapes_c14036	regulation of dendrite development	cell organization and biogenesis	P	Protein furry
ruditapes_c14036	bristle morphogenesis	developmental processes	P	Protein furry
ruditapes_c14036	non-sensory hair organization	developmental processes	P	Protein furry
ruditapes_c14036	rhabdomere development	developmental processes	P	Protein furry
ruditapes_c14036	rhabdomere development	cell organization and biogenesis	P	Protein furry
ruditapes_c14036	dendrite self-avoidance	other biological processes	P	Protein furry
ruditapes_c14036	antennal morphogenesis	developmental processes	P	Protein furry
ruditapes_c14036	regulation of dendrite morphogenesis	developmental processes	P	Protein furry
ruditapes_c14036	regulation of dendrite morphogenesis	cell organization and biogenesis	P	Protein furry
ruditapes_c14036	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein furry
ruditapes_c14036	imaginal disc-derived wing morphogenesis	developmental processes	P	Protein furry
ruditapes_c14036	non-sensory hair organization	cell organization and biogenesis	P	Protein furry
ruditapes_c14036	oocyte morphogenesis	cell organization and biogenesis	P	Protein furry
ruditapes_c14036	Wnt receptor signaling pathway	signal transduction	P	Protein furry
ruditapes_c14036	imaginal disc-derived wing hair organization	developmental processes	P	Protein furry
ruditapes_c14036	imaginal disc-derived wing hair organization	cell organization and biogenesis	P	Protein furry
ruditapes_c14036	"transcription, DNA-dependent"	RNA metabolism	P	Protein furry
ruditapes_c22602	proteolysis	protein metabolism	P	Calpain-B (EC 3.4.22.-) (Calcium-activated neutral proteinase B) (CANP B) [Cleaved into: Calpain-B catalytic subunit 1; Calpain-B catalytic subunit 2]
ruditapes_c22602	protein autoprocessing	protein metabolism	P	Calpain-B (EC 3.4.22.-) (Calcium-activated neutral proteinase B) (CANP B) [Cleaved into: Calpain-B catalytic subunit 1; Calpain-B catalytic subunit 2]
ruditapes2_lrc4529	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10a-2
ruditapes2_lrc4529	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10a-2
ruditapes_lrc37190	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10a-2
ruditapes_lrc37190	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10a-2
ruditapes2_lrc4529	translation	protein metabolism	P	60S ribosomal protein L10a-2
ruditapes_lrc37190	mitotic spindle organization	cell cycle and proliferation	P	60S ribosomal protein L10a-2
ruditapes_lrc37190	mitotic spindle organization	cell organization and biogenesis	P	60S ribosomal protein L10a-2
ruditapes2_lrc4529	mitotic spindle elongation	cell cycle and proliferation	P	60S ribosomal protein L10a-2
ruditapes2_lrc4529	mitotic spindle elongation	cell organization and biogenesis	P	60S ribosomal protein L10a-2
ruditapes_lrc37190	translation	protein metabolism	P	60S ribosomal protein L10a-2
ruditapes_c3455	response to heat	stress response	P	THO complex subunit 6
ruditapes_c3455	cell proliferation	cell cycle and proliferation	P	THO complex subunit 6
ruditapes_c8203	arginine catabolic process to glutamate	other metabolic processes	P	Alanine--glyoxylate aminotransferase 2-like (EC 2.6.1.-)
ruditapes_c8203	metabolic process	other metabolic processes	P	Alanine--glyoxylate aminotransferase 2-like (EC 2.6.1.-)
ruditapes_c13810	protein amino acid glycosylation	protein metabolism	P	"Glycoprotein 3-alpha-L-fucosyltransferase A (EC 2.4.1.214) (Core alpha-(1,3)-fucosyltransferase)"
ruditapes_c21545	proteolysis	protein metabolism	P	Probable Ufm1-specific protease 2 (UfSP2) (EC 3.4.22.-)
ruditapes_c21545	biological_process	other biological processes	P	Probable Ufm1-specific protease 2 (UfSP2) (EC 3.4.22.-)
ruditapes_c10984	RNA splicing	RNA metabolism	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes_c10984	mRNA processing	RNA metabolism	P	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13)
ruditapes2_c2510	catecholamine metabolic process	other metabolic processes	P	MOXD1 homolog 1 (EC 1.14.17.-)
ruditapes2_c2510	biological_process	other biological processes	P	MOXD1 homolog 1 (EC 1.14.17.-)
ruditapes2_c2510	oxidation reduction	other metabolic processes	P	MOXD1 homolog 1 (EC 1.14.17.-)
ruditapes_c36086	stem cell development	other biological processes	P	RNA-binding protein Musashi homolog Rbp6
ruditapes_c15140	axon guidance	developmental processes	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	axon guidance	cell organization and biogenesis	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	multicellular organismal development	developmental processes	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	protein modification process	protein metabolism	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	positive regulation of endocytosis	transport	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	positive regulation of endocytosis	cell organization and biogenesis	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	receptor internalization	transport	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	receptor internalization	other metabolic processes	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	receptor internalization	cell organization and biogenesis	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	Notch signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	positive regulation of synaptogenesis	developmental processes	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	positive regulation of synaptogenesis	cell organization and biogenesis	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	positive regulation of synaptogenesis	cell-cell signaling	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	axon midline choice point recognition	developmental processes	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	axon midline choice point recognition	cell organization and biogenesis	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	negative regulation of Notch signaling pathway	signal transduction	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	protein ubiquitination	protein metabolism	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	positive regulation of receptor internalization	transport	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	positive regulation of receptor internalization	protein metabolism	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes_c15140	positive regulation of receptor internalization	cell organization and biogenesis	P	E3 ubiquitin-protein ligase Nedd-4 (DNedd4) (EC 6.3.2.-)
ruditapes2_c1710	hindgut morphogenesis	developmental processes	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes2_c1710	negative regulation of imaginal disc growth	developmental processes	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes2_c1710	homophilic cell adhesion	cell adhesion	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes2_c1710	establishment or maintenance of actin cytoskeleton polarity	cell organization and biogenesis	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes2_c1710	open tracheal system development	developmental processes	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes2_c1710	oogenesis	other biological processes	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes2_c1710	foregut morphogenesis	developmental processes	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes2_c1710	establishment of polarity of follicular epithelium	developmental processes	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes2_c1710	establishment of polarity of follicular epithelium	cell organization and biogenesis	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes2_c1710	salivary gland development	developmental processes	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes2_c1710	cell adhesion	cell adhesion	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes2_c1710	growth of a germarium-derived egg chamber	other biological processes	P	Fat-like cadherin-related tumor suppressor homolog (Protein kugelei)
ruditapes_s37260	protein transport	transport	P	Protein transport protein Sec61 gamma-2 subunit
ruditapes_s37260	protein targeting	transport	P	Protein transport protein Sec61 gamma-2 subunit
ruditapes_s37260	transport	transport	P	Protein transport protein Sec61 gamma-2 subunit
ruditapes_s37260	intracellular protein transport	transport	P	Protein transport protein Sec61 gamma-2 subunit
ruditapes_s37260	negative regulation of autophagy	other metabolic processes	P	Protein transport protein Sec61 gamma-2 subunit
ruditapes_c26362	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Supporter of activation of yellow protein (Protein enhancer of yellow 3)
ruditapes_c26362	"transcription, DNA-dependent"	RNA metabolism	P	Supporter of activation of yellow protein (Protein enhancer of yellow 3)
ruditapes_c26362	gene silencing	other metabolic processes	P	Supporter of activation of yellow protein (Protein enhancer of yellow 3)
ruditapes_c26362	imaginal disc-derived leg morphogenesis	developmental processes	P	Supporter of activation of yellow protein (Protein enhancer of yellow 3)
ruditapes_c26362	negative regulation of chromatin silencing	RNA metabolism	P	Supporter of activation of yellow protein (Protein enhancer of yellow 3)
ruditapes_c26362	negative regulation of chromatin silencing	cell organization and biogenesis	P	Supporter of activation of yellow protein (Protein enhancer of yellow 3)
ruditapes_c26362	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Supporter of activation of yellow protein (Protein enhancer of yellow 3)
ruditapes_c26362	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Supporter of activation of yellow protein (Protein enhancer of yellow 3)
ruditapes_c29370	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 8 (Protein prodos)
ruditapes_c29370	"transcription, DNA-dependent"	RNA metabolism	P	Transcription initiation factor TFIID subunit 8 (Protein prodos)
ruditapes_c29370	transcription initiation from RNA polymerase II promoter	RNA metabolism	P	Transcription initiation factor TFIID subunit 8 (Protein prodos)
ruditapes_c29370	transcription initiation from RNA polymerase II promoter	cell organization and biogenesis	P	Transcription initiation factor TFIID subunit 8 (Protein prodos)
ruditapes_c29370	cellular process	other biological processes	P	Transcription initiation factor TFIID subunit 8 (Protein prodos)
ruditapes_c12402	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor Mth-like 1 (Protein methuselah-like 1)
ruditapes_c12402	response to stress	stress response	P	Probable G-protein coupled receptor Mth-like 1 (Protein methuselah-like 1)
ruditapes_c10159	signal transduction	signal transduction	P	Probable G-protein coupled receptor Mth-like 1 (Protein methuselah-like 1)
ruditapes_c12402	cell surface receptor linked signal transduction	signal transduction	P	Probable G-protein coupled receptor Mth-like 1 (Protein methuselah-like 1)
ruditapes_c10159	determination of adult life span	developmental processes	P	Probable G-protein coupled receptor Mth-like 1 (Protein methuselah-like 1)
ruditapes_c12402	determination of adult life span	developmental processes	P	Probable G-protein coupled receptor Mth-like 1 (Protein methuselah-like 1)
ruditapes_c12402	signal transduction	signal transduction	P	Probable G-protein coupled receptor Mth-like 1 (Protein methuselah-like 1)
ruditapes_c10159	cell surface receptor linked signal transduction	signal transduction	P	Probable G-protein coupled receptor Mth-like 1 (Protein methuselah-like 1)
ruditapes_c10159	response to stress	stress response	P	Probable G-protein coupled receptor Mth-like 1 (Protein methuselah-like 1)
ruditapes_c10159	G-protein coupled receptor protein signaling pathway	signal transduction	P	Probable G-protein coupled receptor Mth-like 1 (Protein methuselah-like 1)
ruditapes_c6551	mitotic spindle organization	cell cycle and proliferation	P	Probable small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_c6551	mitotic spindle organization	cell organization and biogenesis	P	Probable small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_c6551	"nuclear mRNA splicing, via spliceosome"	RNA metabolism	P	Probable small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_c6551	RNA splicing	RNA metabolism	P	Probable small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes_c6551	mRNA processing	RNA metabolism	P	Probable small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
ruditapes2_c1963	autophagic cell death	death	P	Probable isoaspartyl peptidase/L-asparaginase CG7860 (EC 3.4.19.5) (EC 3.5.1.1) (Beta-aspartyl-peptidase CG7860) (Isoaspartyl dipeptidase CG7860) (L-asparagine amidohydrolase CG7860) [Cleaved into: Probable isoaspartyl peptidase/L-asparaginase CG7860 alpha chain; Probable isoaspartyl peptidase/L-asparaginase CG7860 beta chain]
ruditapes2_c1963	salivary gland cell autophagic cell death	developmental processes	P	Probable isoaspartyl peptidase/L-asparaginase CG7860 (EC 3.4.19.5) (EC 3.5.1.1) (Beta-aspartyl-peptidase CG7860) (Isoaspartyl dipeptidase CG7860) (L-asparagine amidohydrolase CG7860) [Cleaved into: Probable isoaspartyl peptidase/L-asparaginase CG7860 alpha chain; Probable isoaspartyl peptidase/L-asparaginase CG7860 beta chain]
ruditapes2_c1963	salivary gland cell autophagic cell death	death	P	Probable isoaspartyl peptidase/L-asparaginase CG7860 (EC 3.4.19.5) (EC 3.5.1.1) (Beta-aspartyl-peptidase CG7860) (Isoaspartyl dipeptidase CG7860) (L-asparagine amidohydrolase CG7860) [Cleaved into: Probable isoaspartyl peptidase/L-asparaginase CG7860 alpha chain; Probable isoaspartyl peptidase/L-asparaginase CG7860 beta chain]
ruditapes2_c1963	protein maturation	protein metabolism	P	Probable isoaspartyl peptidase/L-asparaginase CG7860 (EC 3.4.19.5) (EC 3.5.1.1) (Beta-aspartyl-peptidase CG7860) (Isoaspartyl dipeptidase CG7860) (L-asparagine amidohydrolase CG7860) [Cleaved into: Probable isoaspartyl peptidase/L-asparaginase CG7860 alpha chain; Probable isoaspartyl peptidase/L-asparaginase CG7860 beta chain]
ruditapes2_c1963	asparagine catabolic process via L-aspartate	other metabolic processes	P	Probable isoaspartyl peptidase/L-asparaginase CG7860 (EC 3.4.19.5) (EC 3.5.1.1) (Beta-aspartyl-peptidase CG7860) (Isoaspartyl dipeptidase CG7860) (L-asparagine amidohydrolase CG7860) [Cleaved into: Probable isoaspartyl peptidase/L-asparaginase CG7860 alpha chain; Probable isoaspartyl peptidase/L-asparaginase CG7860 beta chain]
ruditapes_c8136	periodic partitioning by pair rule gene	developmental processes	P	Teneurin-a (Tena) (Tenascin-like protein)
ruditapes_c14208	regulation of antimicrobial peptide biosynthetic process	other metabolic processes	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	oocyte maturation	other biological processes	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	pronuclear migration	other biological processes	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	intracellular mRNA localization	other biological processes	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	egg activation	other biological processes	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	pronuclear fusion	cell organization and biogenesis	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	mRNA polyadenylation	RNA metabolism	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	RNA polyadenylation	RNA metabolism	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	mRNA processing	RNA metabolism	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	spindle assembly involved in female meiosis	cell cycle and proliferation	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	spindle assembly involved in female meiosis	cell organization and biogenesis	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	oogenesis	other biological processes	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	sperm aster formation	cell organization and biogenesis	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	mitotic spindle organization	cell cycle and proliferation	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c14208	mitotic spindle organization	cell organization and biogenesis	P	Poly(A) RNA polymerase gld-2 homolog B (EC 2.7.7.19) (Protein wispy)
ruditapes_c13383	small GTPase mediated signal transduction	signal transduction	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	GTP catabolic process	other metabolic processes	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	actin filament organization	cell organization and biogenesis	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	cell cycle	cell cycle and proliferation	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	nucleocytoplasmic transport	transport	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	regulation of cell shape	cell organization and biogenesis	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	cell adhesion	cell adhesion	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	intracellular protein transport	transport	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	cell division	other biological processes	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	protein transport	transport	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	signal transduction	signal transduction	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	mitosis	cell cycle and proliferation	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	mitosis	cell organization and biogenesis	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_c13383	transport	transport	P	GTP-binding nuclear protein Ran (Ras-related nuclear protein)
ruditapes_s36593	biological_process	other biological processes	P	Uncharacterized protein CG1552
ruditapes_lrc12952	translation	protein metabolism	P	"Probable 28S ribosomal protein S6, mitochondrial (MRP-S6) (S6mt)"
ruditapes_c25581	biological_process	other biological processes	P	THUMP domain-containing protein 1 homolog
ruditapes_s39585	biological_process	other biological processes	P	CTL-like protein 1
ruditapes_c5908	biological_process	other biological processes	P	CTL-like protein 1
ruditapes_c1597	cell-matrix adhesion	cell adhesion	P	Unc-112-related protein (Fermitin-1)
ruditapes_c1597	cell adhesion	cell adhesion	P	Unc-112-related protein (Fermitin-1)
ruditapes_c1279	regulation of translation	protein metabolism	P	Protein translation factor SUI1 homolog
ruditapes_c1279	translation	protein metabolism	P	Protein translation factor SUI1 homolog
ruditapes_c1279	translational initiation	protein metabolism	P	Protein translation factor SUI1 homolog
ruditapes_c24313	phagocytosis	transport	P	Peroxidasin (EC 1.11.1.7)
ruditapes_c24313	phagocytosis	cell organization and biogenesis	P	Peroxidasin (EC 1.11.1.7)
ruditapes_c24313	response to oxidative stress	stress response	P	Peroxidasin (EC 1.11.1.7)
ruditapes_c24313	extracellular matrix organization	cell organization and biogenesis	P	Peroxidasin (EC 1.11.1.7)
ruditapes_c24313	hydrogen peroxide catabolic process	stress response	P	Peroxidasin (EC 1.11.1.7)
ruditapes_c24313	hydrogen peroxide catabolic process	other metabolic processes	P	Peroxidasin (EC 1.11.1.7)
ruditapes_c24313	oxidation reduction	other metabolic processes	P	Peroxidasin (EC 1.11.1.7)
ruditapes2_c1974	RNA metabolic process	RNA metabolism	P	Nucleolar MIF4G domain-containing protein 1 homolog
ruditapes2_c1974	biological_process	other biological processes	P	Nucleolar MIF4G domain-containing protein 1 homolog
ruditapes_c14503	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (dRGR1)
ruditapes_c14503	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (dRGR1)
ruditapes_c14503	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (dRGR1)
ruditapes_c14503	transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 14 (Mediator complex subunit 14) (dRGR1)
ruditapes_c19753	multicellular organismal development	developmental processes	P	Disco-interacting protein 2
ruditapes_c19753	metabolic process	other metabolic processes	P	Disco-interacting protein 2
ruditapes_s37611	positive regulation of Notch signaling pathway	signal transduction	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	nucleosome mobilization	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	hemopoiesis	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	dendrite morphogenesis	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	dendrite morphogenesis	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	multicellular organismal development	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	mitotic cell cycle G2/M transition DNA damage checkpoint	signal transduction	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	mitotic cell cycle G2/M transition DNA damage checkpoint	stress response	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	dendrite morphogenesis	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	dendrite morphogenesis	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	"transcription, DNA-dependent"	RNA metabolism	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	pupariation	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	mitotic cell cycle G2/M transition DNA damage checkpoint	cell cycle and proliferation	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	nucleosome mobilization	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	pupariation	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	ecdysone receptor-mediated signaling pathway	signal transduction	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	ecdysone receptor-mediated signaling pathway	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	chromatin remodeling	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	positive regulation of Notch signaling pathway	signal transduction	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	multicellular organismal development	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	chromatin remodeling	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	mitotic cell cycle G2/M transition DNA damage checkpoint	stress response	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	chromatin modification	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	hemopoiesis	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	nucleosome mobilization	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	dendrite morphogenesis	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	dendrite morphogenesis	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	mitotic cell cycle G2/M transition DNA damage checkpoint	signal transduction	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	mitotic cell cycle G2/M transition DNA damage checkpoint	stress response	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	mitotic cell cycle G2/M transition DNA damage checkpoint	cell cycle and proliferation	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	mitotic cell cycle G2/M transition DNA damage checkpoint	signal transduction	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	pupariation	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	"transcription, DNA-dependent"	RNA metabolism	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	chromatin modification	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	mitotic cell cycle G2/M transition DNA damage checkpoint	cell cycle and proliferation	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	hemopoiesis	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	ecdysone receptor-mediated signaling pathway	signal transduction	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	ecdysone receptor-mediated signaling pathway	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	"transcription, DNA-dependent"	RNA metabolism	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	chromatin modification	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s37611	multicellular organismal development	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes2_lrc6897	chromatin remodeling	cell organization and biogenesis	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	ecdysone receptor-mediated signaling pathway	signal transduction	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	ecdysone receptor-mediated signaling pathway	developmental processes	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_s38536	positive regulation of Notch signaling pathway	signal transduction	P	Nucleosome-remodeling factor subunit NURF301 (Enhancer of bithorax) (Nucleosome-remodeling factor 215 kDa subunit) (NURF-215)
ruditapes_c18184	negative gravitaxis	other biological processes	P	Transient receptor potential channel pyrexia
ruditapes_c18184	transport	transport	P	Transient receptor potential channel pyrexia
ruditapes_c18184	cation transport	transport	P	Transient receptor potential channel pyrexia
ruditapes_c18184	transmembrane transport	transport	P	Transient receptor potential channel pyrexia
ruditapes_c18184	response to heat	stress response	P	Transient receptor potential channel pyrexia
ruditapes_c18184	ion transport	transport	P	Transient receptor potential channel pyrexia
ruditapes_c18184	response to stimulus	other biological processes	P	Transient receptor potential channel pyrexia
ruditapes_c18184	protein heterotetramerization	cell organization and biogenesis	P	Transient receptor potential channel pyrexia
ruditapes2_c1112	biological_process	other biological processes	P	Putative gamma-glutamylcyclotransferase CG2811 (EC 2.3.2.-)
ruditapes_c30298	negative gravitaxis	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	response to heat	stress response	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	detection of temperature stimulus involved in sensory perception of pain	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	transport	transport	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	regulation of heart contraction	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	behavioral response to pain	stress response	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	regulation of female receptivity	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	response to mechanical stimulus	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	ion transport	transport	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	detection of mechanical stimulus involved in sensory perception	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	feeding behavior	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	copulation	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	detection of mechanical stimulus involved in sensory perception of pain	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	thermotaxis	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	sensory perception of pain	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c30298	response to stimulus	other biological processes	P	Transient receptor potential cation channel protein painless
ruditapes_c22027	sensory perception of smell	other biological processes	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c22027	transport	transport	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c9430	ion transport	transport	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c22027	olfactory behavior	other biological processes	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c9430	regulation of transmembrane ion transport	transport	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c9430	sodium ion transport	transport	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c9430	sensory perception of smell	other biological processes	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c22027	sodium ion transport	transport	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c9430	olfactory behavior	other biological processes	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c9430	transmembrane transport	transport	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c9430	response to stimulus	other biological processes	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c22027	transmembrane transport	transport	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c9430	transport	transport	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c22027	response to stimulus	other biological processes	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c22027	ion transport	transport	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_c22027	regulation of transmembrane ion transport	transport	P	Sodium channel protein 60E (Drosophila ion channel 60) (Drosophila sodium channel 1) (Protein smell-impaired 60E) (Sodium channel 2) (DmNav2)
ruditapes_s37356	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc5218	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_s37356	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4838	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_s36814	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc37329	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc2466	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4838	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_s36845	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc37329	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc36057	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc5688	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_s37356	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4978	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4183	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_s36814	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc35251	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_s36845	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc7604	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc34770	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4838	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc5218	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_s36814	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc5218	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc7604	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc33087	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc36057	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc33087	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc34770	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc5218	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc35251	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc35251	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_s36845	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc2466	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc37329	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc5688	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4183	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_s36845	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_s37356	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4838	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_s36814	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc5688	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4978	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc2466	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc33087	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc34770	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4183	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc5688	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4978	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc34770	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc7604	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc37329	ion transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc35251	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc36057	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc7604	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc33087	transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_lrc36057	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc2466	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4183	proton transport	transport	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes2_lrc4978	ATP biosynthetic process	other metabolic processes	P	"Putative ATP synthase subunit f, mitochondrial"
ruditapes_c22568	biological_process	other biological processes	P	"N-alpha-acetyltransferase, 35 NatC auxiliary subunit homolog (Embryonic growth-associated protein homolog) (Protein MAK10 homolog)"
ruditapes_c17891	protein transport	transport	P	Protein tamozhennic
ruditapes_c17891	transport	transport	P	Protein tamozhennic
ruditapes_c17891	multicellular organismal development	developmental processes	P	Protein tamozhennic
ruditapes_s40449	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S16
ruditapes_s40449	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S16
ruditapes_lrc38595	translation	protein metabolism	P	40S ribosomal protein S16
ruditapes_s37687	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S16
ruditapes_s40449	translation	protein metabolism	P	40S ribosomal protein S16
ruditapes_s37687	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S16
ruditapes_s40449	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S16
ruditapes_s40449	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S16
ruditapes_lrc38595	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S16
ruditapes_lrc38595	mitotic spindle elongation	cell organization and biogenesis	P	40S ribosomal protein S16
ruditapes_s37687	translation	protein metabolism	P	40S ribosomal protein S16
ruditapes_s37687	mitotic spindle elongation	cell cycle and proliferation	P	40S ribosomal protein S16
ruditapes_s37687	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S16
ruditapes_lrc38595	mitotic spindle organization	cell cycle and proliferation	P	40S ribosomal protein S16
ruditapes_lrc38595	mitotic spindle organization	cell organization and biogenesis	P	40S ribosomal protein S16
ruditapes_c15451	"phagocytosis, engulfment"	transport	P	F-actin-capping protein subunit alpha
ruditapes_c15451	"phagocytosis, engulfment"	cell organization and biogenesis	P	F-actin-capping protein subunit alpha
ruditapes_c15451	negative regulation of filopodium assembly	cell organization and biogenesis	P	F-actin-capping protein subunit alpha
ruditapes_c15451	negative regulation of actin filament polymerization	protein metabolism	P	F-actin-capping protein subunit alpha
ruditapes_c15451	negative regulation of actin filament polymerization	cell organization and biogenesis	P	F-actin-capping protein subunit alpha
ruditapes_c15451	regulation of lamellipodium assembly	cell organization and biogenesis	P	F-actin-capping protein subunit alpha
ruditapes_c15451	actin cytoskeleton organization	cell organization and biogenesis	P	F-actin-capping protein subunit alpha
ruditapes_c15451	actin filament capping	protein metabolism	P	F-actin-capping protein subunit alpha
ruditapes_c15451	actin filament capping	cell organization and biogenesis	P	F-actin-capping protein subunit alpha
ruditapes_c15451	wing disc development	developmental processes	P	F-actin-capping protein subunit alpha
ruditapes_c15451	germarium-derived oocyte fate determination	other biological processes	P	F-actin-capping protein subunit alpha
ruditapes_c15451	actin filament organization	cell organization and biogenesis	P	F-actin-capping protein subunit alpha
ruditapes2_c2877	response to DNA damage stimulus	stress response	P	Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-ECS) (GCS) (Gamma-glutamylcysteine synthetase)
ruditapes2_c2877	glutathione metabolic process	other metabolic processes	P	Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-ECS) (GCS) (Gamma-glutamylcysteine synthetase)
ruditapes2_c2877	glutathione biosynthetic process	other metabolic processes	P	Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-ECS) (GCS) (Gamma-glutamylcysteine synthetase)
ruditapes_lrc26759	biological_process	other biological processes	P	Small integral membrane protein 4
ruditapes_c4712	tricarboxylic acid cycle	other metabolic processes	P	"Probable citrate synthase, mitochondrial (EC 2.3.3.1) (Protein knockdown)"
ruditapes_c4712	carbohydrate metabolic process	other metabolic processes	P	"Probable citrate synthase, mitochondrial (EC 2.3.3.1) (Protein knockdown)"
ruditapes_c4712	cellular carbohydrate metabolic process	other metabolic processes	P	"Probable citrate synthase, mitochondrial (EC 2.3.3.1) (Protein knockdown)"
ruditapes_c4712	behavior	other biological processes	P	"Probable citrate synthase, mitochondrial (EC 2.3.3.1) (Protein knockdown)"
ruditapes2_c3476	biological_process	other biological processes	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes_c4261	biological_process	other biological processes	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes2_c7611	translation	protein metabolism	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes2_c5528	translation	protein metabolism	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes_lrc34898	biological_process	other biological processes	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes_lrc28588	biological_process	other biological processes	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes2_c5528	biological_process	other biological processes	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes_lrc34898	translation	protein metabolism	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes2_c3476	translation	protein metabolism	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes2_c7611	biological_process	other biological processes	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes2_c5999	biological_process	other biological processes	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes_lrc34809	translation	protein metabolism	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes2_c5999	translation	protein metabolism	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes_lrc28588	translation	protein metabolism	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes_c4261	translation	protein metabolism	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes_lrc34809	biological_process	other biological processes	P	"39S ribosomal protein L33, mitochondrial (L33mt) (MRP-L33)"
ruditapes_c24367	cell redox homeostasis	other biological processes	P	Glutaredoxin domain-containing cysteine-rich protein CG12206
ruditapes_c24367	biological_process	other biological processes	P	Glutaredoxin domain-containing cysteine-rich protein CG12206
ruditapes_c18245	mitosis	cell cycle and proliferation	P	Centromere/kinetochore protein zw10 (Mitotic 15 protein)
ruditapes_c18245	mitosis	cell organization and biogenesis	P	Centromere/kinetochore protein zw10 (Mitotic 15 protein)
ruditapes_c18245	regulation of meiosis	cell cycle and proliferation	P	Centromere/kinetochore protein zw10 (Mitotic 15 protein)
ruditapes_c18245	mitotic cell cycle spindle assembly checkpoint	cell organization and biogenesis	P	Centromere/kinetochore protein zw10 (Mitotic 15 protein)
ruditapes_c18245	meiotic anaphase I	cell cycle and proliferation	P	Centromere/kinetochore protein zw10 (Mitotic 15 protein)
ruditapes_c18245	meiosis	cell cycle and proliferation	P	Centromere/kinetochore protein zw10 (Mitotic 15 protein)
ruditapes_c18245	cell cycle	cell cycle and proliferation	P	Centromere/kinetochore protein zw10 (Mitotic 15 protein)
ruditapes_c18245	mitotic sister chromatid segregation	cell cycle and proliferation	P	Centromere/kinetochore protein zw10 (Mitotic 15 protein)
ruditapes_c18245	mitotic sister chromatid segregation	cell organization and biogenesis	P	Centromere/kinetochore protein zw10 (Mitotic 15 protein)
ruditapes_c18245	cell division	other biological processes	P	Centromere/kinetochore protein zw10 (Mitotic 15 protein)
ruditapes_c18245	mitotic cell cycle spindle assembly checkpoint	cell cycle and proliferation	P	Centromere/kinetochore protein zw10 (Mitotic 15 protein)
ruditapes_c26579	biological_process	other biological processes	P	Uncharacterized protein CG42248
ruditapes_c31936	muscle organ development	developmental processes	P	Protein O-mannosyl-transferase 2 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 2) (DmPOMT2) (dPOMT2) (Protein twisted)
ruditapes_c31936	muscle attachment	developmental processes	P	Protein O-mannosyl-transferase 2 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 2) (DmPOMT2) (dPOMT2) (Protein twisted)
ruditapes_c31936	sarcomere organization	developmental processes	P	Protein O-mannosyl-transferase 2 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 2) (DmPOMT2) (dPOMT2) (Protein twisted)
ruditapes_c31936	sarcomere organization	cell organization and biogenesis	P	Protein O-mannosyl-transferase 2 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 2) (DmPOMT2) (dPOMT2) (Protein twisted)
ruditapes_c31936	multicellular organismal development	developmental processes	P	Protein O-mannosyl-transferase 2 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 2) (DmPOMT2) (dPOMT2) (Protein twisted)
ruditapes_c31936	lipid glycosylation	other metabolic processes	P	Protein O-mannosyl-transferase 2 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 2) (DmPOMT2) (dPOMT2) (Protein twisted)
ruditapes_c31936	protein amino acid O-linked mannosylation	protein metabolism	P	Protein O-mannosyl-transferase 2 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 2) (DmPOMT2) (dPOMT2) (Protein twisted)
ruditapes_c31936	somatic muscle development	developmental processes	P	Protein O-mannosyl-transferase 2 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 2) (DmPOMT2) (dPOMT2) (Protein twisted)
ruditapes_c31936	protein amino acid O-linked glycosylation	protein metabolism	P	Protein O-mannosyl-transferase 2 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 2) (DmPOMT2) (dPOMT2) (Protein twisted)
ruditapes_c9989	biological_process	other biological processes	P	Sel1 repeat-containing protein 1 homolog (Beta-lactamase hcp-like protein CG13865)
ruditapes_c8022	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 21 (Mediator complex subunit 21) (dMED21) (dSRB7) (dTRAP19)
ruditapes_c8022	"transcription, DNA-dependent"	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 21 (Mediator complex subunit 21) (dMED21) (dSRB7) (dTRAP19)
ruditapes_c8022	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Mediator of RNA polymerase II transcription subunit 21 (Mediator complex subunit 21) (dMED21) (dSRB7) (dTRAP19)
ruditapes2_c1669	chitin metabolic process	other metabolic processes	P	Probable chitinase 3 (EC 3.2.1.14) (Probable chitinase 1)
ruditapes_c26973	metabolic process	other metabolic processes	P	Probable chitinase 3 (EC 3.2.1.14) (Probable chitinase 1)
ruditapes_c26973	chitin metabolic process	other metabolic processes	P	Probable chitinase 3 (EC 3.2.1.14) (Probable chitinase 1)
ruditapes2_c1669	metabolic process	other metabolic processes	P	Probable chitinase 3 (EC 3.2.1.14) (Probable chitinase 1)
ruditapes_c26973	carbohydrate metabolic process	other metabolic processes	P	Probable chitinase 3 (EC 3.2.1.14) (Probable chitinase 1)
ruditapes_c26973	chitin catabolic process	other metabolic processes	P	Probable chitinase 3 (EC 3.2.1.14) (Probable chitinase 1)
ruditapes_c26973	polysaccharide catabolic process	other metabolic processes	P	Probable chitinase 3 (EC 3.2.1.14) (Probable chitinase 1)
ruditapes2_c1669	carbohydrate metabolic process	other metabolic processes	P	Probable chitinase 3 (EC 3.2.1.14) (Probable chitinase 1)
ruditapes2_c1669	chitin catabolic process	other metabolic processes	P	Probable chitinase 3 (EC 3.2.1.14) (Probable chitinase 1)
ruditapes2_c1669	polysaccharide catabolic process	other metabolic processes	P	Probable chitinase 3 (EC 3.2.1.14) (Probable chitinase 1)
ruditapes_c26483	biological_process	other biological processes	P	WD repeat and SOCS box-containing protein 1 (WSB-1)
ruditapes_c11929	oxidation reduction	other metabolic processes	P	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)
ruditapes_c2387	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	1-aminocyclopropane-1-carboxylate synthase-like protein 1 (ACC synthase-like protein 1)
ruditapes2_c1153	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	1-aminocyclopropane-1-carboxylate synthase-like protein 1 (ACC synthase-like protein 1)
ruditapes_c3602	biosynthetic process	other metabolic processes	P	1-aminocyclopropane-1-carboxylate synthase-like protein 1 (ACC synthase-like protein 1)
ruditapes_c2387	biosynthetic process	other metabolic processes	P	1-aminocyclopropane-1-carboxylate synthase-like protein 1 (ACC synthase-like protein 1)
ruditapes2_c1153	biosynthetic process	other metabolic processes	P	1-aminocyclopropane-1-carboxylate synthase-like protein 1 (ACC synthase-like protein 1)
ruditapes_c3602	1-aminocyclopropane-1-carboxylate biosynthetic process	other metabolic processes	P	1-aminocyclopropane-1-carboxylate synthase-like protein 1 (ACC synthase-like protein 1)
ruditapes_c2851	negative regulation of MAP kinase activity	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase eta (Protein-tyrosine phosphatase eta) (R-PTP-eta) (EC 3.1.3.48) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (R-PTP-J) (Supporting-cell antigen)
ruditapes_c2851	negative regulation of T cell receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase eta (Protein-tyrosine phosphatase eta) (R-PTP-eta) (EC 3.1.3.48) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (R-PTP-J) (Supporting-cell antigen)
ruditapes_c2851	protein amino acid dephosphorylation	protein metabolism	P	Receptor-type tyrosine-protein phosphatase eta (Protein-tyrosine phosphatase eta) (R-PTP-eta) (EC 3.1.3.48) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (R-PTP-J) (Supporting-cell antigen)
ruditapes_c2851	positive regulation of cell adhesion	cell adhesion	P	Receptor-type tyrosine-protein phosphatase eta (Protein-tyrosine phosphatase eta) (R-PTP-eta) (EC 3.1.3.48) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (R-PTP-J) (Supporting-cell antigen)
ruditapes_c2851	platelet-derived growth factor receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase eta (Protein-tyrosine phosphatase eta) (R-PTP-eta) (EC 3.1.3.48) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (R-PTP-J) (Supporting-cell antigen)
ruditapes_c2851	dephosphorylation	other metabolic processes	P	Receptor-type tyrosine-protein phosphatase eta (Protein-tyrosine phosphatase eta) (R-PTP-eta) (EC 3.1.3.48) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (R-PTP-J) (Supporting-cell antigen)
ruditapes_c2851	negative regulation of epidermal growth factor receptor signaling pathway	signal transduction	P	Receptor-type tyrosine-protein phosphatase eta (Protein-tyrosine phosphatase eta) (R-PTP-eta) (EC 3.1.3.48) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (R-PTP-J) (Supporting-cell antigen)
ruditapes_c2851	positive regulation of focal adhesion formation	cell adhesion	P	Receptor-type tyrosine-protein phosphatase eta (Protein-tyrosine phosphatase eta) (R-PTP-eta) (EC 3.1.3.48) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (R-PTP-J) (Supporting-cell antigen)
ruditapes_c2851	positive regulation of focal adhesion formation	cell organization and biogenesis	P	Receptor-type tyrosine-protein phosphatase eta (Protein-tyrosine phosphatase eta) (R-PTP-eta) (EC 3.1.3.48) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (R-PTP-J) (Supporting-cell antigen)
ruditapes_c2851	negative regulation of protein kinase B signaling cascade	signal transduction	P	Receptor-type tyrosine-protein phosphatase eta (Protein-tyrosine phosphatase eta) (R-PTP-eta) (EC 3.1.3.48) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (R-PTP-J) (Supporting-cell antigen)
ruditapes_s38007	translation	protein metabolism	P	40S ribosomal protein S30
ruditapes_lrc34108	sequestering of actin monomers	protein metabolism	P	Thymosin beta
ruditapes_lrc34108	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta
ruditapes_s37669	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta
ruditapes_lrc34108	cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta
ruditapes_s37669	sequestering of actin monomers	protein metabolism	P	Thymosin beta
ruditapes_s37669	sequestering of actin monomers	cell organization and biogenesis	P	Thymosin beta
ruditapes_s37669	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta
ruditapes_lrc34108	actin cytoskeleton organization	cell organization and biogenesis	P	Thymosin beta
ruditapes2_c3281	signal transduction	signal transduction	P	Teneurin-3 (Ten-3) (Protein Odd Oz/ten-m homolog 3) (Tenascin-M3) (Ten-m3) (Teneurin transmembrane protein 3)
ruditapes2_lrc6886	interspecies interaction between organisms	other biological processes	P	Hemagglutinin [Cleaved into: Hemagglutinin HA1 chain; Hemagglutinin HA2 chain]
ruditapes2_lrc6886	viral envelope fusion with host membrane	cell organization and biogenesis	P	Hemagglutinin [Cleaved into: Hemagglutinin HA1 chain; Hemagglutinin HA2 chain]
ruditapes_lrc38206	pachytene	cell cycle and proliferation	P	Putative transcription factor Ovo-like 1 (mOvo1) (mOvo1a)
ruditapes_lrc38206	epidermis development	developmental processes	P	Putative transcription factor Ovo-like 1 (mOvo1) (mOvo1a)
ruditapes_lrc38206	skin development	developmental processes	P	Putative transcription factor Ovo-like 1 (mOvo1) (mOvo1a)
ruditapes_lrc38206	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Putative transcription factor Ovo-like 1 (mOvo1) (mOvo1a)
ruditapes_lrc38206	spermatogenesis	other biological processes	P	Putative transcription factor Ovo-like 1 (mOvo1) (mOvo1a)
ruditapes_lrc38206	"transcription, DNA-dependent"	RNA metabolism	P	Putative transcription factor Ovo-like 1 (mOvo1) (mOvo1a)
ruditapes_lrc38206	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Putative transcription factor Ovo-like 1 (mOvo1) (mOvo1a)
ruditapes_lrc38206	mesoderm development	developmental processes	P	Putative transcription factor Ovo-like 1 (mOvo1) (mOvo1a)
ruditapes_lrc38206	kidney development	developmental processes	P	Putative transcription factor Ovo-like 1 (mOvo1) (mOvo1a)
ruditapes_c9886	histone H2A acetylation	protein metabolism	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	histone H2A acetylation	cell organization and biogenesis	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	DNA recombination	DNA metabolism	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	ATP catabolic process	other metabolic processes	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	response to DNA damage stimulus	stress response	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	"regulation of transcription, DNA-dependent"	RNA metabolism	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	DNA repair	stress response	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	DNA repair	DNA metabolism	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	histone H4 acetylation	protein metabolism	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	histone H4 acetylation	cell organization and biogenesis	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	"transcription, DNA-dependent"	RNA metabolism	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	cellular response to UV	other biological processes	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c9886	chromatin modification	cell organization and biogenesis	P	RuvB-like 2 (EC 3.6.4.12) (p47 protein)
ruditapes_c27466	apoptosis	death	P	PH domain leucine-rich repeat protein phosphatase 1 (EC 3.1.3.16) (Pleckstrin homology domain-containing family E member 1) (PH domain-containing family E member 1) (Suprachiasmatic nucleus circadian oscillatory protein)
ruditapes_c23391	protein amino acid dephosphorylation	protein metabolism	P	PH domain leucine-rich repeat protein phosphatase 1 (EC 3.1.3.16) (Pleckstrin homology domain-containing family E member 1) (PH domain-containing family E member 1) (Suprachiasmatic nucleus circadian oscillatory protein)
ruditapes_c27466	circadian rhythm	other biological processes	P	PH domain leucine-rich repeat protein phosphatase 1 (EC 3.1.3.16) (Pleckstrin homology domain-containing family E member 1) (PH domain-containing family E member 1) (Suprachiasmatic nucleus circadian oscillatory protein)
ruditapes_c23391	metabolic process	other metabolic processes	P	PH domain leucine-rich repeat protein phosphatase 1 (EC 3.1.3.16) (Pleckstrin homology domain-containing family E member 1) (PH domain-containing family E member 1) (Suprachiasmatic nucleus circadian oscillatory protein)
ruditapes_c23391	apoptosis	death	P	PH domain leucine-rich repeat protein phosphatase 1 (EC 3.1.3.16) (Pleckstrin homology domain-containing family E member 1) (PH domain-containing family E member 1) (Suprachiasmatic nucleus circadian oscillatory protein)
ruditapes_c23391	circadian rhythm	other biological processes	P	PH domain leucine-rich repeat protein phosphatase 1 (EC 3.1.3.16) (Pleckstrin homology domain-containing family E member 1) (PH domain-containing family E member 1) (Suprachiasmatic nucleus circadian oscillatory protein)
ruditapes_c27466	metabolic process	other metabolic processes	P	PH domain leucine-rich repeat protein phosphatase 1 (EC 3.1.3.16) (Pleckstrin homology domain-containing family E member 1) (PH domain-containing family E member 1) (Suprachiasmatic nucleus circadian oscillatory protein)
ruditapes_c27466	protein amino acid dephosphorylation	protein metabolism	P	PH domain leucine-rich repeat protein phosphatase 1 (EC 3.1.3.16) (Pleckstrin homology domain-containing family E member 1) (PH domain-containing family E member 1) (Suprachiasmatic nucleus circadian oscillatory protein)
ruditapes_c935	biological_process	other biological processes	P	"Teneurin-2 (Ten-2) (Protein Odd Oz/ten-m homolog 2) (Tenascin-M2) (Ten-m2) (Teneurin transmembrane protein 2) [Cleaved into: Ten-2, soluble form; Ten-2 intracellular domain (Ten-2 ICD)]"
ruditapes_c935	signal transduction	signal transduction	P	"Teneurin-2 (Ten-2) (Protein Odd Oz/ten-m homolog 2) (Tenascin-M2) (Ten-m2) (Teneurin transmembrane protein 2) [Cleaved into: Ten-2, soluble form; Ten-2 intracellular domain (Ten-2 ICD)]"
ruditapes_c5073	signal transduction	signal transduction	P	Teneurin-3 (Ten-3) (Protein Odd Oz/ten-m homolog 3) (Tenascin-M3) (Ten-m3) (Teneurin transmembrane protein 3)
ruditapes2_c2906	signal transduction	signal transduction	P	Ficolin-1 (Collagen/fibrinogen domain-containing protein 1) (Ficolin-A) (Ficolin-alpha) (M-ficolin)
ruditapes_c22156	biological_process	other biological processes	P	Caseinolytic peptidase B protein homolog (Suppressor of potassium transport defect 3)
ruditapes_c22156	cellular response to heat	stress response	P	Caseinolytic peptidase B protein homolog (Suppressor of potassium transport defect 3)
ruditapes2_c939	"transcription, DNA-dependent"	RNA metabolism	P	"KH domain-containing, RNA-binding, signal transduction-associated protein 2 (Sam68-like mammalian protein 1) (SLM-1) (mSLM-1)"
ruditapes2_c939	"regulation of transcription, DNA-dependent"	RNA metabolism	P	"KH domain-containing, RNA-binding, signal transduction-associated protein 2 (Sam68-like mammalian protein 1) (SLM-1) (mSLM-1)"
ruditapes_c22806	positive regulation of cellular pH reduction	other biological processes	P	Vasopressin V1b receptor (V1bR) (AVPR V1b) (AVPR V3) (Antidiuretic hormone receptor 1b) (Vasopressin V3 receptor)
ruditapes_c22806	G-protein coupled receptor protein signaling pathway	signal transduction	P	Vasopressin V1b receptor (V1bR) (AVPR V1b) (AVPR V3) (Antidiuretic hormone receptor 1b) (Vasopressin V3 receptor)
ruditapes_c22806	elevation of cytosolic calcium ion concentration	other biological processes	P	Vasopressin V1b receptor (V1bR) (AVPR V1b) (AVPR V3) (Antidiuretic hormone receptor 1b) (Vasopressin V3 receptor)
ruditapes_c22806	response to stress	stress response	P	Vasopressin V1b receptor (V1bR) (AVPR V1b) (AVPR V3) (Antidiuretic hormone receptor 1b) (Vasopressin V3 receptor)
ruditapes_c22806	"G-protein signaling, coupled to cAMP nucleotide second messenger"	signal transduction	P	Vasopressin V1b receptor (V1bR) (AVPR V1b) (AVPR V3) (Antidiuretic hormone receptor 1b) (Vasopressin V3 receptor)
ruditapes_c22806	positive regulation of blood pressure	other biological processes	P	Vasopressin V1b receptor (V1bR) (AVPR V1b) (AVPR V3) (Antidiuretic hormone receptor 1b) (Vasopressin V3 receptor)
ruditapes_c22806	positive regulation of heart rate	other biological processes	P	Vasopressin V1b receptor (V1bR) (AVPR V1b) (AVPR V3) (Antidiuretic hormone receptor 1b) (Vasopressin V3 receptor)
ruditapes_c22806	signal transduction	signal transduction	P	Vasopressin V1b receptor (V1bR) (AVPR V1b) (AVPR V3) (Antidiuretic hormone receptor 1b) (Vasopressin V3 receptor)
ruditapes_c22806	hyperosmotic salinity response	stress response	P	Vasopressin V1b receptor (V1bR) (AVPR V1b) (AVPR V3) (Antidiuretic hormone receptor 1b) (Vasopressin V3 receptor)
ruditapes_c22806	positive regulation of glutamate secretion	transport	P	Vasopressin V1b receptor (V1bR) (AVPR V1b) (AVPR V3) (Antidiuretic hormone receptor 1b) (Vasopressin V3 receptor)
ruditapes_c22806	positive regulation of glutamate secretion	cell-cell signaling	P	Vasopressin V1b receptor (V1bR) (AVPR V1b) (AVPR V3) (Antidiuretic hormone receptor 1b) (Vasopressin V3 receptor)
ruditapes_lrc15258	response to stimulus	other biological processes	P	Amiloride-sensitive sodium channel subunit gamma (Epithelial Na(+) channel subunit gamma) (Gamma-ENaC) (Gamma-NaCH) (Nonvoltage-gated sodium channel 1 subunit gamma) (SCNEG)
ruditapes_lrc15258	ion transport	transport	P	Amiloride-sensitive sodium channel subunit gamma (Epithelial Na(+) channel subunit gamma) (Gamma-ENaC) (Gamma-NaCH) (Nonvoltage-gated sodium channel 1 subunit gamma) (SCNEG)
ruditapes_lrc15258	response to hypoxia	stress response	P	Amiloride-sensitive sodium channel subunit gamma (Epithelial Na(+) channel subunit gamma) (Gamma-ENaC) (Gamma-NaCH) (Nonvoltage-gated sodium channel 1 subunit gamma) (SCNEG)
ruditapes_lrc15258	sensory perception of taste	other biological processes	P	Amiloride-sensitive sodium channel subunit gamma (Epithelial Na(+) channel subunit gamma) (Gamma-ENaC) (Gamma-NaCH) (Nonvoltage-gated sodium channel 1 subunit gamma) (SCNEG)
ruditapes_lrc15258	sodium ion transport	transport	P	Amiloride-sensitive sodium channel subunit gamma (Epithelial Na(+) channel subunit gamma) (Gamma-ENaC) (Gamma-NaCH) (Nonvoltage-gated sodium channel 1 subunit gamma) (SCNEG)
ruditapes_lrc15258	transport	transport	P	Amiloride-sensitive sodium channel subunit gamma (Epithelial Na(+) channel subunit gamma) (Gamma-ENaC) (Gamma-NaCH) (Nonvoltage-gated sodium channel 1 subunit gamma) (SCNEG)
ruditapes_lrc15258	"wound healing, spreading of epidermal cells"	stress response	P	Amiloride-sensitive sodium channel subunit gamma (Epithelial Na(+) channel subunit gamma) (Gamma-ENaC) (Gamma-NaCH) (Nonvoltage-gated sodium channel 1 subunit gamma) (SCNEG)
ruditapes2_c1069	retina development in camera-type eye	developmental processes	P	Chloride channel protein 2 (ClC-2)
ruditapes2_c1069	regulation of transmembrane ion transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes2_c1069	chloride transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes2_c1069	cell differentiation involved in salivary gland development	developmental processes	P	Chloride channel protein 2 (ClC-2)
ruditapes2_c1069	transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes2_c1069	regulation of anion transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes2_c1069	ion transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes2_c1069	transmembrane transport	transport	P	Chloride channel protein 2 (ClC-2)
ruditapes_c13566	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Calcium-regulated heat stable protein 1 (Calcium-regulated heat-stable protein of 24 kDa) (CRHSP-24)
ruditapes_c13566	regulation of mRNA stability	RNA metabolism	P	Calcium-regulated heat stable protein 1 (Calcium-regulated heat-stable protein of 24 kDa) (CRHSP-24)
ruditapes_c13566	calcium-mediated signaling	signal transduction	P	Calcium-regulated heat stable protein 1 (Calcium-regulated heat-stable protein of 24 kDa) (CRHSP-24)
ruditapes_c10446	carbohydrate metabolic process	other metabolic processes	P	"Glycogen phosphorylase, muscle form (EC 2.4.1.1) (Myophosphorylase)"
ruditapes_c10446	glycogen metabolic process	other metabolic processes	P	"Glycogen phosphorylase, muscle form (EC 2.4.1.1) (Myophosphorylase)"
ruditapes_c10446	response to cAMP	other biological processes	P	"Glycogen phosphorylase, muscle form (EC 2.4.1.1) (Myophosphorylase)"
ruditapes_c10446	glycogen catabolic process	other metabolic processes	P	"Glycogen phosphorylase, muscle form (EC 2.4.1.1) (Myophosphorylase)"
ruditapes_c10446	metabolic process	other metabolic processes	P	"Glycogen phosphorylase, muscle form (EC 2.4.1.1) (Myophosphorylase)"
ruditapes_c10446	response to organic substance	other biological processes	P	"Glycogen phosphorylase, muscle form (EC 2.4.1.1) (Myophosphorylase)"
ruditapes_c10446	cellular calcium ion homeostasis	other biological processes	P	"Glycogen phosphorylase, muscle form (EC 2.4.1.1) (Myophosphorylase)"
ruditapes_c10446	response to hypoxia	stress response	P	"Glycogen phosphorylase, muscle form (EC 2.4.1.1) (Myophosphorylase)"
ruditapes_c18960	G-protein coupled receptor protein signaling pathway	signal transduction	P	Vomeronasal type-1 receptor 49 (Vomeronasal receptor VRi2) (Vomeronasal type-1 receptor B2)
ruditapes_c18960	response to pheromone	other biological processes	P	Vomeronasal type-1 receptor 49 (Vomeronasal receptor VRi2) (Vomeronasal type-1 receptor B2)
ruditapes_c18960	sensory perception of chemical stimulus	other biological processes	P	Vomeronasal type-1 receptor 49 (Vomeronasal receptor VRi2) (Vomeronasal type-1 receptor B2)
ruditapes_c18960	signal transduction	signal transduction	P	Vomeronasal type-1 receptor 49 (Vomeronasal receptor VRi2) (Vomeronasal type-1 receptor B2)
ruditapes2_c2450	phagocytosis	transport	P	Coronin-1C (Coronin-3)
ruditapes2_c2450	phagocytosis	cell organization and biogenesis	P	Coronin-1C (Coronin-3)
ruditapes2_c2450	actin cortical patch assembly	cell organization and biogenesis	P	Coronin-1C (Coronin-3)
ruditapes2_c2450	actin cytoskeleton organization	cell organization and biogenesis	P	Coronin-1C (Coronin-3)
ruditapes_c11660	positive regulation of interferon-beta production	other biological processes	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c11660	positive regulation of interferon-beta biosynthetic process	other metabolic processes	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c11660	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c11660	response to virus	other biological processes	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c11660	positive regulation of interferon-alpha production	other biological processes	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c11660	defense response to Gram-positive bacterium	stress response	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c11660	negative regulation of gene expression	other metabolic processes	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c11660	innate immune response	stress response	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c11660	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c11660	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c11660	activation of innate immune response	stress response	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c11660	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (T2K) (TANK-binding kinase 1)
ruditapes_c24871	fatty acid beta-oxidation	other metabolic processes	P	"Enoyl-CoA delta isomerase 2, mitochondrial (EC 5.3.3.8) (Delta(3),delta(2)-enoyl-CoA isomerase) (D3,D2-enoyl-CoA isomerase) (Dodecenoyl-CoA isomerase) (Peroxisomal 3,2-trans-enoyl-CoA isomerase) (pECI)"
ruditapes_c24871	fatty acid catabolic process	other metabolic processes	P	"Enoyl-CoA delta isomerase 2, mitochondrial (EC 5.3.3.8) (Delta(3),delta(2)-enoyl-CoA isomerase) (D3,D2-enoyl-CoA isomerase) (Dodecenoyl-CoA isomerase) (Peroxisomal 3,2-trans-enoyl-CoA isomerase) (pECI)"
ruditapes_c24871	metabolic process	other metabolic processes	P	"Enoyl-CoA delta isomerase 2, mitochondrial (EC 5.3.3.8) (Delta(3),delta(2)-enoyl-CoA isomerase) (D3,D2-enoyl-CoA isomerase) (Dodecenoyl-CoA isomerase) (Peroxisomal 3,2-trans-enoyl-CoA isomerase) (pECI)"
ruditapes_c22686	long-term memory	other biological processes	P	SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (GKAP/SAPAP-interacting protein) (SPANK-1) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) (Synamon)
ruditapes_c22686	associative learning	other biological processes	P	SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (GKAP/SAPAP-interacting protein) (SPANK-1) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) (Synamon)
ruditapes_c22686	cytoskeletal anchoring at plasma membrane	cell organization and biogenesis	P	SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (GKAP/SAPAP-interacting protein) (SPANK-1) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) (Synamon)
ruditapes_c22686	nervous system development	developmental processes	P	SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (GKAP/SAPAP-interacting protein) (SPANK-1) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) (Synamon)
ruditapes_c22686	protein complex assembly	cell organization and biogenesis	P	SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (GKAP/SAPAP-interacting protein) (SPANK-1) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) (Synamon)
ruditapes_c22686	neuromuscular process controlling balance	other biological processes	P	SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (GKAP/SAPAP-interacting protein) (SPANK-1) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) (Synamon)
ruditapes_c22686	synapse maturation	developmental processes	P	SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (GKAP/SAPAP-interacting protein) (SPANK-1) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) (Synamon)
ruditapes_c22686	synapse maturation	cell organization and biogenesis	P	SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (GKAP/SAPAP-interacting protein) (SPANK-1) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) (Synamon)
ruditapes_c22686	cell differentiation	other biological processes	P	SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (GKAP/SAPAP-interacting protein) (SPANK-1) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) (Synamon)
ruditapes_c8519	neuron projection development	developmental processes	P	Vesicle-associated membrane protein-associated protein A (VAMP-A) (VAMP-associated protein A) (VAP-A) (33 kDa VAMP-associated protein) (VAP-33)
ruditapes_c8519	neuron projection development	cell organization and biogenesis	P	Vesicle-associated membrane protein-associated protein A (VAMP-A) (VAMP-associated protein A) (VAP-A) (33 kDa VAMP-associated protein) (VAP-33)
ruditapes_c8519	cell death	death	P	Vesicle-associated membrane protein-associated protein A (VAMP-A) (VAMP-associated protein A) (VAP-A) (33 kDa VAMP-associated protein) (VAP-33)
ruditapes_c13767	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Nucleolar complex protein 2 homolog (Protein NOC2 homolog) (NOC2-like protein) (Novel INHAT repressor)
ruditapes_c13767	apoptosis	death	P	Nucleolar complex protein 2 homolog (Protein NOC2 homolog) (NOC2-like protein) (Novel INHAT repressor)
ruditapes_c13767	"transcription, DNA-dependent"	RNA metabolism	P	Nucleolar complex protein 2 homolog (Protein NOC2 homolog) (NOC2-like protein) (Novel INHAT repressor)
ruditapes_c24449	male genitalia development	developmental processes	P	Ankyrin repeat and SOCS box protein 1 (ASB-1)
ruditapes_c24449	multicellular organismal development	developmental processes	P	Ankyrin repeat and SOCS box protein 1 (ASB-1)
ruditapes_c8957	cortical actin cytoskeleton organization	cell organization and biogenesis	P	Band 4.1-like protein 3 (4.1B) (Differentially expressed in adenocarcinoma of the lung protein 1) (DAL-1) (DAL1P) (mDAL-1)
ruditapes2_c170	muscle organ development	developmental processes	P	Transgelin-2 (SM22-beta)
ruditapes_lrc35489	muscle organ development	developmental processes	P	Transgelin-2 (SM22-beta)
ruditapes2_lrc3572	muscle organ development	developmental processes	P	Transgelin-2 (SM22-beta)
ruditapes2_lrc6434	muscle organ development	developmental processes	P	Transgelin-2 (SM22-beta)
ruditapes2_lrc6379	muscle organ development	developmental processes	P	Transgelin-2 (SM22-beta)
ruditapes_lrc33479	muscle organ development	developmental processes	P	Transgelin-2 (SM22-beta)
ruditapes2_lrc5376	muscle organ development	developmental processes	P	Transgelin-2 (SM22-beta)
ruditapes2_lrc3206	muscle organ development	developmental processes	P	Transgelin-2 (SM22-beta)
ruditapes2_c3536	muscle organ development	developmental processes	P	Transgelin-2 (SM22-beta)
ruditapes2_lrc3311	muscle organ development	developmental processes	P	Transgelin-2 (SM22-beta)
ruditapes_c11875	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	"nucleotide-excision repair, DNA gap filling"	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	in utero embryonic development	developmental processes	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	DNA synthesis during DNA repair	stress response	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	DNA synthesis during DNA repair	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	"nucleotide-excision repair, DNA gap filling"	stress response	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	response to DNA damage stimulus	stress response	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	DNA replication	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	DNA repair	stress response	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	DNA repair	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	G1/S transition of mitotic cell cycle	cell cycle and proliferation	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	"base-excision repair, gap-filling"	stress response	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c11875	"base-excision repair, gap-filling"	DNA metabolism	P	DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase II subunit A)
ruditapes_c113	proteolysis	protein metabolism	P	Carboxypeptidase Q (EC 3.4.17.-) (Hematopoietic lineage switch 2) (Plasma glutamate carboxypeptidase)
ruditapes_c113	biological_process	other biological processes	P	Carboxypeptidase Q (EC 3.4.17.-) (Hematopoietic lineage switch 2) (Plasma glutamate carboxypeptidase)
ruditapes_c113	tissue regeneration	stress response	P	Carboxypeptidase Q (EC 3.4.17.-) (Hematopoietic lineage switch 2) (Plasma glutamate carboxypeptidase)
ruditapes_c113	tissue regeneration	developmental processes	P	Carboxypeptidase Q (EC 3.4.17.-) (Hematopoietic lineage switch 2) (Plasma glutamate carboxypeptidase)
ruditapes2_c2097	transport	transport	P	AP-4 complex subunit sigma-1 (AP-4 adapter complex subunit sigma-1) (Adapter-related protein complex 4 subunit sigma-1) (Sigma-1 subunit of AP-4) (Sigma-4-adaptin) (Sigma4-adaptin)
ruditapes2_c2097	vesicle-mediated transport	transport	P	AP-4 complex subunit sigma-1 (AP-4 adapter complex subunit sigma-1) (Adapter-related protein complex 4 subunit sigma-1) (Sigma-1 subunit of AP-4) (Sigma-4-adaptin) (Sigma4-adaptin)
ruditapes2_c2097	protein transport	transport	P	AP-4 complex subunit sigma-1 (AP-4 adapter complex subunit sigma-1) (Adapter-related protein complex 4 subunit sigma-1) (Sigma-1 subunit of AP-4) (Sigma-4-adaptin) (Sigma4-adaptin)
ruditapes2_c2097	intracellular protein transport	transport	P	AP-4 complex subunit sigma-1 (AP-4 adapter complex subunit sigma-1) (Adapter-related protein complex 4 subunit sigma-1) (Sigma-1 subunit of AP-4) (Sigma-4-adaptin) (Sigma4-adaptin)
ruditapes_c28409	glutamate metabolic process	other metabolic processes	P	"Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial (KAT/AadAT) (2-aminoadipate aminotransferase) (2-aminoadipate transaminase) (EC 2.6.1.39) (Alpha-aminoadipate aminotransferase) (AadAT) (Kynurenine aminotransferase II) (Kynurenine--oxoglutarate aminotransferase II) (Kynurenine--oxoglutarate transaminase 2) (EC 2.6.1.7) (Kynurenine--oxoglutarate transaminase II)"
ruditapes_c28409	biosynthetic process	other metabolic processes	P	"Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial (KAT/AadAT) (2-aminoadipate aminotransferase) (2-aminoadipate transaminase) (EC 2.6.1.39) (Alpha-aminoadipate aminotransferase) (AadAT) (Kynurenine aminotransferase II) (Kynurenine--oxoglutarate aminotransferase II) (Kynurenine--oxoglutarate transaminase 2) (EC 2.6.1.7) (Kynurenine--oxoglutarate transaminase II)"
ruditapes_c28409	2-oxoglutarate metabolic process	other metabolic processes	P	"Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial (KAT/AadAT) (2-aminoadipate aminotransferase) (2-aminoadipate transaminase) (EC 2.6.1.39) (Alpha-aminoadipate aminotransferase) (AadAT) (Kynurenine aminotransferase II) (Kynurenine--oxoglutarate aminotransferase II) (Kynurenine--oxoglutarate transaminase 2) (EC 2.6.1.7) (Kynurenine--oxoglutarate transaminase II)"
ruditapes_c28409	kynurenine metabolic process	other metabolic processes	P	"Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial (KAT/AadAT) (2-aminoadipate aminotransferase) (2-aminoadipate transaminase) (EC 2.6.1.39) (Alpha-aminoadipate aminotransferase) (AadAT) (Kynurenine aminotransferase II) (Kynurenine--oxoglutarate aminotransferase II) (Kynurenine--oxoglutarate transaminase 2) (EC 2.6.1.7) (Kynurenine--oxoglutarate transaminase II)"
ruditapes_c26672	translation	protein metabolism	P	Ribosome-recycling factor (RRF) (Ribosome-releasing factor)
ruditapes_c12740	Mo-molybdopterin cofactor biosynthetic process	protein metabolism	P	Cyclic pyranopterin monophosphate synthase (EC 4.1.99.18) (Molybdenum cofactor biosynthesis protein A)
ruditapes_c17157	response to DNA damage stimulus	stress response	P	DNA integrity scanning protein DisA
ruditapes_c17157	DNA repair	stress response	P	DNA integrity scanning protein DisA
ruditapes_c17157	DNA repair	DNA metabolism	P	DNA integrity scanning protein DisA
ruditapes_c8621	metabolic process	other metabolic processes	P	Putative 1-aminocyclopropane-1-carboxylate deaminase (ACC deaminase) (EC 3.5.99.7)
ruditapes_c28629	chemotaxis	other biological processes	P	Chemotaxis protein methyltransferase (EC 2.1.1.80)
ruditapes_c28629	methylation	other metabolic processes	P	Chemotaxis protein methyltransferase (EC 2.1.1.80)
ruditapes_c25279	response to stress	stress response	P	Protein hfq
ruditapes_c25279	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Protein hfq
ruditapes_c21161	cysteinyl-tRNA aminoacylation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c21161	cysteinyl-tRNA aminoacylation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c21161	tRNA aminoacylation for protein translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c21161	tRNA aminoacylation for protein translation	RNA metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes_c21161	translation	protein metabolism	P	Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)
ruditapes2_c954	translation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes2_c954	alanyl-tRNA aminoacylation	protein metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes2_c954	alanyl-tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes2_c954	tRNA aminoacylation	RNA metabolism	P	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
ruditapes_c24125	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (EC 4.1.1.20)
ruditapes_c24125	cellular amino acid biosynthetic process	other metabolic processes	P	Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (EC 4.1.1.20)
ruditapes_c24125	lysine biosynthetic process	other metabolic processes	P	Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (EC 4.1.1.20)
ruditapes_lrc29596	GTP catabolic process	other metabolic processes	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_lrc29596	translation	protein metabolism	P	Elongation factor 4 (EF-4) (EC 3.6.5.n1) (Ribosomal back-translocase LepA)
ruditapes_c8217	oxidation reduction	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase) (Beta-Ketoacyl-acyl carrier protein reductase) (Beta-ketoacyl-ACP reductase)
ruditapes_c8217	metabolic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase) (Beta-Ketoacyl-acyl carrier protein reductase) (Beta-ketoacyl-ACP reductase)
ruditapes_c8217	lipid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase) (Beta-Ketoacyl-acyl carrier protein reductase) (Beta-ketoacyl-ACP reductase)
ruditapes_c8217	fatty acid biosynthetic process	other metabolic processes	P	3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase) (Beta-Ketoacyl-acyl carrier protein reductase) (Beta-ketoacyl-ACP reductase)
ruditapes_c17541	response to antibiotic	other biological processes	P	Serine/alanine racemase (EC 5.1.1.-) (EC 5.1.1.1) (Vancomycin C-type resistance protein VanT)
ruditapes_c17541	peptidoglycan biosynthetic process	other metabolic processes	P	Serine/alanine racemase (EC 5.1.1.-) (EC 5.1.1.1) (Vancomycin C-type resistance protein VanT)
ruditapes_c17541	regulation of cell shape	cell organization and biogenesis	P	Serine/alanine racemase (EC 5.1.1.-) (EC 5.1.1.1) (Vancomycin C-type resistance protein VanT)
ruditapes_c17541	alanine metabolic process	other metabolic processes	P	Serine/alanine racemase (EC 5.1.1.-) (EC 5.1.1.1) (Vancomycin C-type resistance protein VanT)
ruditapes_c17541	cell wall organization	cell organization and biogenesis	P	Serine/alanine racemase (EC 5.1.1.-) (EC 5.1.1.1) (Vancomycin C-type resistance protein VanT)
ruditapes_c22469	DNA topological change	DNA metabolism	P	DNA gyrase subunit B (EC 5.99.1.3) (Fragment)
ruditapes_c5928	polyphosphate biosynthetic process	other metabolic processes	P	Polyphosphate kinase (EC 2.7.4.1) (ATP-polyphosphate phosphotransferase) (Polyphosphoric acid kinase)
ruditapes_c5928	phosphorylation	other metabolic processes	P	Polyphosphate kinase (EC 2.7.4.1) (ATP-polyphosphate phosphotransferase) (Polyphosphoric acid kinase)
ruditapes_c14440	carbohydrate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c14440	glycerol metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c14440	glycerol-3-phosphate metabolic process	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c14440	phosphorylation	other metabolic processes	P	Glycerol kinase (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
ruditapes_c9589	oxidation reduction	other metabolic processes	P	D-beta-hydroxybutyrate dehydrogenase (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase) (3-HBDH)
ruditapes_c9589	metabolic process	other metabolic processes	P	D-beta-hydroxybutyrate dehydrogenase (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase) (3-HBDH)
ruditapes_lrc27056	response to antibiotic	other biological processes	P	Carbapenem-hydrolyzing beta-lactamase BlaB-4 (CHbetaL-4) (EC 3.5.2.6) (Class B carbapenemase BlaB-4) (Metallo lactamase BlaB-3)
ruditapes_lrc27056	antibiotic catabolic process	other metabolic processes	P	Carbapenem-hydrolyzing beta-lactamase BlaB-4 (CHbetaL-4) (EC 3.5.2.6) (Class B carbapenemase BlaB-4) (Metallo lactamase BlaB-3)
ruditapes_c18813	translation	protein metabolism	P	50S ribosomal protein L22
ruditapes2_lrc5506	nucleosome assembly	cell organization and biogenesis	P	Histone H2A.1 (GcH2A)
ruditapes_lrc23438	cellular component organization	cell organization and biogenesis	P	Formin-like protein 7 (AtFH7) (AtFORMIN-7)
ruditapes_lrc23438	actin cytoskeleton organization	cell organization and biogenesis	P	Formin-like protein 7 (AtFH7) (AtFORMIN-7)
ruditapes_c28611	phospholipid transport	transport	P	Phospholipid-transporting ATPase 3 (AtALA3) (EC 3.6.3.1) (Aminophospholipid ATPase 3) (Aminophospholipid flippase 3) (Protein IRREGULAR TRICHOME BRANCH 2)
ruditapes_c28611	Golgi vesicle budding	transport	P	Phospholipid-transporting ATPase 3 (AtALA3) (EC 3.6.3.1) (Aminophospholipid ATPase 3) (Aminophospholipid flippase 3) (Protein IRREGULAR TRICHOME BRANCH 2)
ruditapes_c28611	Golgi vesicle budding	cell organization and biogenesis	P	Phospholipid-transporting ATPase 3 (AtALA3) (EC 3.6.3.1) (Aminophospholipid ATPase 3) (Aminophospholipid flippase 3) (Protein IRREGULAR TRICHOME BRANCH 2)
ruditapes_c28611	shoot development	developmental processes	P	Phospholipid-transporting ATPase 3 (AtALA3) (EC 3.6.3.1) (Aminophospholipid ATPase 3) (Aminophospholipid flippase 3) (Protein IRREGULAR TRICHOME BRANCH 2)
ruditapes_c28611	cation transport	transport	P	Phospholipid-transporting ATPase 3 (AtALA3) (EC 3.6.3.1) (Aminophospholipid ATPase 3) (Aminophospholipid flippase 3) (Protein IRREGULAR TRICHOME BRANCH 2)
ruditapes_c28611	root development	developmental processes	P	Phospholipid-transporting ATPase 3 (AtALA3) (EC 3.6.3.1) (Aminophospholipid ATPase 3) (Aminophospholipid flippase 3) (Protein IRREGULAR TRICHOME BRANCH 2)
ruditapes_c18621	"nuclear mRNA cis splicing, via spliceosome"	RNA metabolism	P	Pentatricopeptide repeat-containing protein At2g15820
ruditapes_c18621	photosystem I assembly	other metabolic processes	P	Pentatricopeptide repeat-containing protein At2g15820
ruditapes_c18621	photosystem I assembly	cell organization and biogenesis	P	Pentatricopeptide repeat-containing protein At2g15820
ruditapes_c18621	Group II intron splicing	RNA metabolism	P	Pentatricopeptide repeat-containing protein At2g15820
ruditapes_c16293	cell wall organization	cell organization and biogenesis	P	Pollen-specific leucine-rich repeat extensin-like protein 3 (AtPEX3) (Pollen-specific LRR/EXTENSIN3) (Cell wall hydroxyproline-rich glycoprotein)
ruditapes_c38690	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L)
ruditapes_c38690	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L)
ruditapes_c38690	transport	transport	P	NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L)
ruditapes_c38690	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 4L (EC 1.6.5.3) (NADH dehydrogenase subunit 4L)
ruditapes_c4639	"transcription, DNA-dependent"	RNA metabolism	P	DNA-directed RNA polymerase subunit alpha (PEP) (EC 2.7.7.6) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha)
ruditapes_c24232	"regulation of circadian sleep/wake cycle, sleep"	other biological processes	P	Prostaglandin-H2 D-isomerase (EC 5.3.99.2) (Glutathione-independent PGD synthase) (Lipocalin-type prostaglandin-D synthase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS) (PGDS2)
ruditapes_c24232	lipid metabolic process	other metabolic processes	P	Prostaglandin-H2 D-isomerase (EC 5.3.99.2) (Glutathione-independent PGD synthase) (Lipocalin-type prostaglandin-D synthase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS) (PGDS2)
ruditapes_c24232	prostaglandin biosynthetic process	other metabolic processes	P	Prostaglandin-H2 D-isomerase (EC 5.3.99.2) (Glutathione-independent PGD synthase) (Lipocalin-type prostaglandin-D synthase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS) (PGDS2)
ruditapes_c24232	fatty acid biosynthetic process	other metabolic processes	P	Prostaglandin-H2 D-isomerase (EC 5.3.99.2) (Glutathione-independent PGD synthase) (Lipocalin-type prostaglandin-D synthase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS) (PGDS2)
ruditapes_c24232	transport	transport	P	Prostaglandin-H2 D-isomerase (EC 5.3.99.2) (Glutathione-independent PGD synthase) (Lipocalin-type prostaglandin-D synthase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS) (PGDS2)
ruditapes_c24232	lipid biosynthetic process	other metabolic processes	P	Prostaglandin-H2 D-isomerase (EC 5.3.99.2) (Glutathione-independent PGD synthase) (Lipocalin-type prostaglandin-D synthase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS) (PGDS2)
ruditapes_lrc10183	proteolysis	protein metabolism	P	Tryptase-2 (EC 3.4.21.59)
ruditapes_c38024	proteolysis	protein metabolism	P	Tryptase-2 (EC 3.4.21.59)
ruditapes_c35260	proteolysis	protein metabolism	P	Tryptase-2 (EC 3.4.21.59)
ruditapes_s39480	proteolysis	protein metabolism	P	Tryptase-2 (EC 3.4.21.59)
ruditapes_c10950	transport	transport	P	Transient receptor potential cation channel subfamily V member 5 (TrpV5) (Epithelial calcium channel 1) (ECaC1) (Osm-9-like TRP channel 3) (OTRPC3)
ruditapes_c10950	ion transport	transport	P	Transient receptor potential cation channel subfamily V member 5 (TrpV5) (Epithelial calcium channel 1) (ECaC1) (Osm-9-like TRP channel 3) (OTRPC3)
ruditapes_c10950	protein tetramerization	cell organization and biogenesis	P	Transient receptor potential cation channel subfamily V member 5 (TrpV5) (Epithelial calcium channel 1) (ECaC1) (Osm-9-like TRP channel 3) (OTRPC3)
ruditapes_c10950	calcium ion transport	transport	P	Transient receptor potential cation channel subfamily V member 5 (TrpV5) (Epithelial calcium channel 1) (ECaC1) (Osm-9-like TRP channel 3) (OTRPC3)
ruditapes_c10950	transmembrane transport	transport	P	Transient receptor potential cation channel subfamily V member 5 (TrpV5) (Epithelial calcium channel 1) (ECaC1) (Osm-9-like TRP channel 3) (OTRPC3)
ruditapes_c10950	transmembrane calcium ion transport	transport	P	Transient receptor potential cation channel subfamily V member 5 (TrpV5) (Epithelial calcium channel 1) (ECaC1) (Osm-9-like TRP channel 3) (OTRPC3)
ruditapes_c8077	T-helper 1 type immune response	other biological processes	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c8077	positive regulation of gene expression	other metabolic processes	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c8077	induction of apoptosis via death domain receptors	death	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c8077	positive regulation of granulocyte macrophage colony-stimulating factor production	other biological processes	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c8077	positive regulation of NK T cell proliferation	cell cycle and proliferation	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c8077	positive regulation of activated T cell proliferation	cell cycle and proliferation	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c8077	interferon-gamma biosynthetic process	other metabolic processes	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c8077	angiogenesis	developmental processes	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c8077	positive regulation of natural killer cell proliferation	cell cycle and proliferation	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c8077	regulation of cell adhesion	cell adhesion	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c8077	positive regulation of interleukin-17 production	other biological processes	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c8077	positive regulation of interferon-gamma production	other biological processes	P	Interleukin-18 (IL-18) (Interferon gamma-inducing factor) (IFN-gamma-inducing factor) (Interleukin-1 gamma) (IL-1 gamma)
ruditapes_c29358	translation	protein metabolism	P	40S ribosomal protein S11
ruditapes_lrc15309	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_s39206	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_lrc38793	translation	protein metabolism	P	60S ribosomal protein L27
ruditapes_c24955	protein amino acid phosphorylation	protein metabolism	P	Mitogen-activated protein kinase kinase kinase mom-4 (EC 2.7.11.25)
ruditapes_c24955	asymmetric protein localization involved in cell fate determination	other biological processes	P	Mitogen-activated protein kinase kinase kinase mom-4 (EC 2.7.11.25)
ruditapes_c24955	muscle cell fate specification	other biological processes	P	Mitogen-activated protein kinase kinase kinase mom-4 (EC 2.7.11.25)
ruditapes_c24955	Wnt receptor signaling pathway	signal transduction	P	Mitogen-activated protein kinase kinase kinase mom-4 (EC 2.7.11.25)
ruditapes_c24955	embryonic development ending in birth or egg hatching	developmental processes	P	Mitogen-activated protein kinase kinase kinase mom-4 (EC 2.7.11.25)
ruditapes_c24955	asymmetric cell division	other biological processes	P	Mitogen-activated protein kinase kinase kinase mom-4 (EC 2.7.11.25)
ruditapes_c24955	endodermal cell fate specification	other biological processes	P	Mitogen-activated protein kinase kinase kinase mom-4 (EC 2.7.11.25)
ruditapes_c24955	MAPKKK cascade	signal transduction	P	Mitogen-activated protein kinase kinase kinase mom-4 (EC 2.7.11.25)
ruditapes_c24955	phosphorylation	other metabolic processes	P	Mitogen-activated protein kinase kinase kinase mom-4 (EC 2.7.11.25)
ruditapes_c24955	multicellular organismal development	developmental processes	P	Mitogen-activated protein kinase kinase kinase mom-4 (EC 2.7.11.25)
ruditapes_c20551	cell adhesion	cell adhesion	P	Neuroligin-1
ruditapes_c20551	synaptogenesis	developmental processes	P	Neuroligin-1
ruditapes_c20551	synaptogenesis	cell organization and biogenesis	P	Neuroligin-1
ruditapes_c18945	insulin receptor signaling pathway	signal transduction	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	determination of adult life span	developmental processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	regulation of organ growth	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	positive regulation of cell size	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	vitellogenesis	cell organization and biogenesis	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	response to starvation	stress response	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	cell differentiation	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	oogenesis	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	regulation of multicellular organism growth	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	primary spermatocyte growth	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	male germ-line stem cell division	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	regulation of cell size	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	positive regulation of multicellular organism growth	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	aging	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	response to anoxia	stress response	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	positive regulation of organ growth	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	cell morphogenesis	cell organization and biogenesis	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	germ-line stem-cell niche maintenance	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	metabolic process	other metabolic processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	positive regulation of cell growth	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	regulation of growth	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	insulin-like growth factor receptor signaling pathway	signal transduction	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	"regulation of tube length, open tracheal system"	developmental processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	multicellular organismal aging	developmental processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes_c18945	growth of a germarium-derived egg chamber	other biological processes	P	Insulin receptor substrate 1 (dIRS) (Protein chico)
ruditapes2_c2284	lipid metabolic process	other metabolic processes	P	Lipase ZK262.3 (EC 3.1.1.-)
ruditapes2_c2284	lipid catabolic process	other metabolic processes	P	Lipase ZK262.3 (EC 3.1.1.-)
ruditapes_c15205	embryonic development ending in birth or egg hatching	developmental processes	P	Anillin-like protein 1
ruditapes_c15205	hermaphrodite genitalia development	developmental processes	P	Anillin-like protein 1
ruditapes_c15205	multicellular organismal development	developmental processes	P	Anillin-like protein 1
ruditapes_c15205	septin ring organization	cell organization and biogenesis	P	Anillin-like protein 1
ruditapes_c15205	polar body extrusion after meiotic divisions	cell cycle and proliferation	P	Anillin-like protein 1
ruditapes_c15205	growth	other biological processes	P	Anillin-like protein 1
ruditapes_c15205	cortical cytoskeleton organization	cell organization and biogenesis	P	Anillin-like protein 1
ruditapes_c15205	nematode larval development	developmental processes	P	Anillin-like protein 1
ruditapes_c15205	locomotion	other biological processes	P	Anillin-like protein 1
ruditapes_c15205	collagen and cuticulin-based cuticle development	developmental processes	P	Anillin-like protein 1
ruditapes_c15205	protein localization	other biological processes	P	Anillin-like protein 1
ruditapes_c15205	pseudocleavage during first cell cycle	developmental processes	P	Anillin-like protein 1
ruditapes_c15205	tail tip morphogenesis	other biological processes	P	Anillin-like protein 1
ruditapes_c15205	receptor-mediated endocytosis	transport	P	Anillin-like protein 1
ruditapes_c15205	receptor-mediated endocytosis	cell organization and biogenesis	P	Anillin-like protein 1
ruditapes_c15205	meiosis	cell cycle and proliferation	P	Anillin-like protein 1
ruditapes_c22901	positive regulation of growth rate	other biological processes	P	Probable phosphomannomutase (PMM) (EC 5.4.2.8)
ruditapes_c22901	lipid storage	other biological processes	P	Probable phosphomannomutase (PMM) (EC 5.4.2.8)
ruditapes_c22901	metabolic process	other metabolic processes	P	Probable phosphomannomutase (PMM) (EC 5.4.2.8)
ruditapes_c22901	mannose biosynthetic process	other metabolic processes	P	Probable phosphomannomutase (PMM) (EC 5.4.2.8)
ruditapes_c4725	post-embryonic body morphogenesis	developmental processes	P	Troponin I 3 (CeTNI-3) (TnI 3)
ruditapes_c4725	reproduction	other biological processes	P	Troponin I 3 (CeTNI-3) (TnI 3)
ruditapes_c4725	defecation	transport	P	Troponin I 3 (CeTNI-3) (TnI 3)
ruditapes_c4725	muscle contraction	other biological processes	P	Troponin I 3 (CeTNI-3) (TnI 3)
ruditapes_c4725	hermaphrodite genitalia development	developmental processes	P	Troponin I 3 (CeTNI-3) (TnI 3)
ruditapes_c4725	locomotion	other biological processes	P	Troponin I 3 (CeTNI-3) (TnI 3)
ruditapes_c4725	nematode larval development	developmental processes	P	Troponin I 3 (CeTNI-3) (TnI 3)
ruditapes_c4725	oviposition	other biological processes	P	Troponin I 3 (CeTNI-3) (TnI 3)
ruditapes_c9113	sodium ion transport	transport	P	Probable sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium-dependent ATPase subunit beta-3)
ruditapes_c9113	ion transport	transport	P	Probable sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium-dependent ATPase subunit beta-3)
ruditapes_c9113	ATP metabolic process	other metabolic processes	P	Probable sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium-dependent ATPase subunit beta-3)
ruditapes_c9113	transport	transport	P	Probable sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium-dependent ATPase subunit beta-3)
ruditapes_c9113	potassium ion transport	transport	P	Probable sodium/potassium-transporting ATPase subunit beta-3 (Sodium/potassium-dependent ATPase subunit beta-3)
ruditapes_c9329	response to drug	other biological processes	P	Protein unc-80 (Uncoordinated protein 80)
ruditapes_c9329	positive regulation of locomotion	other biological processes	P	Protein unc-80 (Uncoordinated protein 80)
ruditapes_c9329	cation homeostasis	other biological processes	P	Protein unc-80 (Uncoordinated protein 80)
ruditapes_lrc22371	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L8
ruditapes2_lrc7177	reproduction	other biological processes	P	60S ribosomal protein L8
ruditapes_lrc22371	nematode larval development	developmental processes	P	60S ribosomal protein L8
ruditapes2_lrc7177	positive regulation of growth rate	other biological processes	P	60S ribosomal protein L8
ruditapes2_lrc7177	nematode larval development	developmental processes	P	60S ribosomal protein L8
ruditapes_lrc22371	reproduction	other biological processes	P	60S ribosomal protein L8
ruditapes_lrc22371	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L8
ruditapes2_lrc7177	embryonic development ending in birth or egg hatching	developmental processes	P	60S ribosomal protein L8
ruditapes_lrc22371	locomotion	other biological processes	P	60S ribosomal protein L8
ruditapes2_lrc7177	growth	other biological processes	P	60S ribosomal protein L8
ruditapes2_lrc7177	locomotion	other biological processes	P	60S ribosomal protein L8
ruditapes2_lrc7177	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc22371	growth	other biological processes	P	60S ribosomal protein L8
ruditapes_lrc22371	translation	protein metabolism	P	60S ribosomal protein L8
ruditapes_lrc35356	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor 1 homolog
ruditapes_lrc35356	biological_process	other biological processes	P	Transcription elongation factor 1 homolog
ruditapes_lrc35356	"transcription, DNA-dependent"	RNA metabolism	P	Transcription elongation factor 1 homolog
ruditapes_c5802	hermaphrodite genitalia development	developmental processes	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c5802	protein transport	transport	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c5802	embryonic development ending in birth or egg hatching	developmental processes	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c5802	positive regulation of growth rate	other biological processes	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c5802	multicellular organismal development	developmental processes	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c5802	reproduction	other biological processes	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c5802	transport	transport	P	Protein pad-1 (Patterning defective protein 1)
ruditapes_c8529	protein amino acid methylation	protein metabolism	P	Protein arginine N-methyltransferase 7 (EC 2.1.1.-)
ruditapes_c8529	methylation	other metabolic processes	P	Protein arginine N-methyltransferase 7 (EC 2.1.1.-)
ruditapes_c8102	establishment of protein localization	other biological processes	P	Cell death abnormality protein 1
ruditapes_c8102	engulfment of apoptotic cell	transport	P	Cell death abnormality protein 1
ruditapes_c8102	engulfment of apoptotic cell	cell organization and biogenesis	P	Cell death abnormality protein 1
ruditapes_c8102	programmed cell death	death	P	Cell death abnormality protein 1
ruditapes_c8102	recognition of apoptotic cell	transport	P	Cell death abnormality protein 1
ruditapes_c8102	recognition of apoptotic cell	cell organization and biogenesis	P	Cell death abnormality protein 1
ruditapes_c8102	defense response to bacterium	stress response	P	Cell death abnormality protein 1
ruditapes_c8102	apoptosis	death	P	Cell death abnormality protein 1
ruditapes_c8102	actin cytoskeleton reorganization	cell organization and biogenesis	P	Cell death abnormality protein 1
ruditapes_c8102	cellular response to unfolded protein	stress response	P	Cell death abnormality protein 1
ruditapes_c8102	phagolysosome formation	transport	P	Cell death abnormality protein 1
ruditapes_c8102	phagolysosome formation	cell organization and biogenesis	P	Cell death abnormality protein 1
ruditapes_lrc23718	ion transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	growth	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	positive regulation of growth rate	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	positive regulation of growth rate	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	ion transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	positive regulation of growth rate	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	apoptosis	death	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	embryonic development	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	nematode larval development	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	embryonic development	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	determination of adult life span	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	growth	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	reproduction	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	growth	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	positive regulation of growth rate	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	nematode larval development	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	embryonic development ending in birth or egg hatching	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	ion transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	embryonic development	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	ion transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	embryonic development ending in birth or egg hatching	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	nematode larval development	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	reproduction	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	determination of adult life span	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	nematode larval development	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	determination of adult life span	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	embryonic development	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	determination of adult life span	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	apoptosis	death	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	ATP biosynthetic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	apoptosis	death	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	apoptosis	death	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	growth	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	ATP metabolic process	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	reproduction	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	ATP hydrolysis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	ATP synthesis coupled proton transport	transport	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c343	ATP synthesis coupled proton transport	other metabolic processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc23718	embryonic development ending in birth or egg hatching	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes2_c3112	reproduction	other biological processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc35325	embryonic development ending in birth or egg hatching	developmental processes	P	"ATP synthase subunit alpha, mitochondrial"
ruditapes_lrc32505	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34978	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc38808	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36216	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34456	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc3836	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36596	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc35201	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc38808	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36014	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4104	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4166	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36216	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc38808	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4104	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34978	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4261	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34404	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34404	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc35201	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36596	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc3836	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc32505	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4166	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc3836	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4261	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4104	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc35201	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36596	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36014	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34404	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34456	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34978	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4261	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc38808	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36014	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34456	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34978	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc3836	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34404	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36014	spermatid development	other biological processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc35201	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc32505	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4166	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4166	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36216	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4261	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36216	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_lrc4104	electron transport chain	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc34456	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc36596	transport	transport	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes_lrc32505	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Cytochrome b-c1 complex subunit 9 (Complex III subunit 9) (Complex III subunit X) (Protein oxen) (Ubiquinol-cytochrome c reductase complex 6.3 kDa protein)
ruditapes2_c1138	ephrin receptor signaling pathway	signal transduction	P	Adapter molecule Crk
ruditapes2_c1138	positive regulation of JNK cascade	signal transduction	P	Adapter molecule Crk
ruditapes2_c1138	positive regulation of JNK cascade	stress response	P	Adapter molecule Crk
ruditapes2_c1138	regulation of actin cytoskeleton organization	cell organization and biogenesis	P	Adapter molecule Crk
ruditapes2_c1138	myoblast fusion	cell organization and biogenesis	P	Adapter molecule Crk
ruditapes2_c1138	multicellular organismal development	developmental processes	P	Adapter molecule Crk
ruditapes2_c1138	myoblast fusion	developmental processes	P	Adapter molecule Crk
ruditapes2_c1138	regulation of Rho GTPase activity	signal transduction	P	Adapter molecule Crk
ruditapes2_c1138	"imaginal disc fusion, thorax closure"	developmental processes	P	Adapter molecule Crk
ruditapes2_c132	inositol trisphosphate metabolic process	other metabolic processes	P	"Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134) (Inositol 1,3,4-trisphosphate 5/6-kinase) (Inositol-triphosphate 5/6-kinase) (Ins(1,3,4)P(3) 5/6-kinase) (EC 2.7.1.159)"
ruditapes_c489	phosphorylation	other metabolic processes	P	"Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134) (Inositol 1,3,4-trisphosphate 5/6-kinase) (Inositol-triphosphate 5/6-kinase) (Ins(1,3,4)P(3) 5/6-kinase) (EC 2.7.1.159)"
ruditapes2_c132	phosphorylation	other metabolic processes	P	"Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134) (Inositol 1,3,4-trisphosphate 5/6-kinase) (Inositol-triphosphate 5/6-kinase) (Ins(1,3,4)P(3) 5/6-kinase) (EC 2.7.1.159)"
ruditapes_c489	inositol trisphosphate metabolic process	other metabolic processes	P	"Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134) (Inositol 1,3,4-trisphosphate 5/6-kinase) (Inositol-triphosphate 5/6-kinase) (Ins(1,3,4)P(3) 5/6-kinase) (EC 2.7.1.159)"
ruditapes_c23855	mitotic cell cycle G2/M transition DNA damage checkpoint	cell cycle and proliferation	P	DNA replication licensing factor Mcm7 (EC 3.6.4.12) (Minichromosome maintenance 7 protein) (DmMCM3)
ruditapes_c23855	mitotic cell cycle G2/M transition DNA damage checkpoint	signal transduction	P	DNA replication licensing factor Mcm7 (EC 3.6.4.12) (Minichromosome maintenance 7 protein) (DmMCM3)
ruditapes_c23855	mitotic cell cycle G2/M transition DNA damage checkpoint	stress response	P	DNA replication licensing factor Mcm7 (EC 3.6.4.12) (Minichromosome maintenance 7 protein) (DmMCM3)
ruditapes_c23855	cell cycle	cell cycle and proliferation	P	DNA replication licensing factor Mcm7 (EC 3.6.4.12) (Minichromosome maintenance 7 protein) (DmMCM3)
ruditapes_c23855	DNA replication initiation	DNA metabolism	P	DNA replication licensing factor Mcm7 (EC 3.6.4.12) (Minichromosome maintenance 7 protein) (DmMCM3)
ruditapes_c23855	DNA replication	DNA metabolism	P	DNA replication licensing factor Mcm7 (EC 3.6.4.12) (Minichromosome maintenance 7 protein) (DmMCM3)
ruditapes_c27267	nucleotide catabolic process	other metabolic processes	P	Protein 5NUC [Includes: UDP-sugar hydrolase (EC 3.6.1.45) (UDP-sugar diphosphatase) (UDP-sugar pyrophosphatase); 5'-nucleotidase (5'-NT) (EC 3.1.3.5)]
ruditapes_c27263	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	Deoxynucleoside kinase (EC 2.7.1.145) (Deoxyribonucleoside kinase) (Dm-dNK) (Multispecific deoxynucleoside kinase)
ruditapes_c27263	phosphorylation	other metabolic processes	P	Deoxynucleoside kinase (EC 2.7.1.145) (Deoxyribonucleoside kinase) (Dm-dNK) (Multispecific deoxynucleoside kinase)
ruditapes_c27263	deoxyribonucleoside monophosphate biosynthetic process	other metabolic processes	P	Deoxynucleoside kinase (EC 2.7.1.145) (Deoxyribonucleoside kinase) (Dm-dNK) (Multispecific deoxynucleoside kinase)
ruditapes_c27263	nucleoside diphosphate phosphorylation	other metabolic processes	P	Deoxynucleoside kinase (EC 2.7.1.145) (Deoxyribonucleoside kinase) (Dm-dNK) (Multispecific deoxynucleoside kinase)
ruditapes_c27263	nucleotide phosphorylation	other metabolic processes	P	Deoxynucleoside kinase (EC 2.7.1.145) (Deoxyribonucleoside kinase) (Dm-dNK) (Multispecific deoxynucleoside kinase)
ruditapes_c27263	DNA replication	DNA metabolism	P	Deoxynucleoside kinase (EC 2.7.1.145) (Deoxyribonucleoside kinase) (Dm-dNK) (Multispecific deoxynucleoside kinase)
ruditapes_c22273	histone exchange	cell organization and biogenesis	P	NuA4 complex subunit EAF3 homolog (Protein MRG15)
ruditapes_c22273	response to DNA damage stimulus	stress response	P	NuA4 complex subunit EAF3 homolog (Protein MRG15)
ruditapes_c22273	histone acetylation	protein metabolism	P	NuA4 complex subunit EAF3 homolog (Protein MRG15)
ruditapes_c22273	histone acetylation	cell organization and biogenesis	P	NuA4 complex subunit EAF3 homolog (Protein MRG15)
ruditapes_c22273	DNA repair	stress response	P	NuA4 complex subunit EAF3 homolog (Protein MRG15)
ruditapes_c22273	DNA repair	DNA metabolism	P	NuA4 complex subunit EAF3 homolog (Protein MRG15)
ruditapes_c22273	chromatin modification	cell organization and biogenesis	P	NuA4 complex subunit EAF3 homolog (Protein MRG15)
ruditapes_c22273	"transcription, DNA-dependent"	RNA metabolism	P	NuA4 complex subunit EAF3 homolog (Protein MRG15)
ruditapes_c22273	"regulation of transcription, DNA-dependent"	RNA metabolism	P	NuA4 complex subunit EAF3 homolog (Protein MRG15)
ruditapes_c22273	chromatin silencing	RNA metabolism	P	NuA4 complex subunit EAF3 homolog (Protein MRG15)
ruditapes_c13509	"negative regulation of transcription from RNA polymerase II promoter, mitotic"	cell cycle and proliferation	P	Negative elongation factor B
ruditapes_c13509	"negative regulation of transcription from RNA polymerase II promoter, mitotic"	RNA metabolism	P	Negative elongation factor B
ruditapes_c13509	"negative regulation of transcription from RNA polymerase II promoter, mitotic"	cell organization and biogenesis	P	Negative elongation factor B
ruditapes_c13509	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Negative elongation factor B
ruditapes_c13509	"transcription, DNA-dependent"	RNA metabolism	P	Negative elongation factor B
ruditapes_c13509	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Negative elongation factor B
ruditapes2_c1895	transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim8
ruditapes2_c1895	protein transport	transport	P	Mitochondrial import inner membrane translocase subunit Tim8
ruditapes2_c1895	protein import into mitochondrial inner membrane	transport	P	Mitochondrial import inner membrane translocase subunit Tim8
ruditapes2_c1895	protein import into mitochondrial inner membrane	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim8
ruditapes2_c1895	protein targeting to mitochondrion	transport	P	Mitochondrial import inner membrane translocase subunit Tim8
ruditapes2_c1895	protein targeting to mitochondrion	cell organization and biogenesis	P	Mitochondrial import inner membrane translocase subunit Tim8
ruditapes_c20143	dephosphorylation	other metabolic processes	P	Myotubularin-related protein 7 (EC 3.1.3.-)
ruditapes_c20143	protein amino acid dephosphorylation	protein metabolism	P	Myotubularin-related protein 7 (EC 3.1.3.-)
ruditapes_c2572	blood coagulation	stress response	P	"cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A (EC 3.1.4.17) (EC 3.1.4.35)"
ruditapes_c2572	metabolic process	other metabolic processes	P	"cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A (EC 3.1.4.17) (EC 3.1.4.35)"
ruditapes_c2572	signal transduction	signal transduction	P	"cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A (EC 3.1.4.17) (EC 3.1.4.35)"
ruditapes_c19171	negative regulation of cell proliferation	cell cycle and proliferation	P	Deleted in lung and esophageal cancer protein 1 (Deleted in lung cancer protein 1) (DLC-1)
ruditapes_c24842	toll-like receptor signaling pathway	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	toll-like receptor signaling pathway	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	interleukin-8 biosynthetic process	other metabolic processes	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	defense response to bacterium	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	Toll signaling pathway	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	positive regulation of stress-activated MAPK cascade	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	activation of caspase activity	death	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	toll-like receptor 3 signaling pathway	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	positive regulation of dendritic cell antigen processing and presentation	other biological processes	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	activation of MAPK activity	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	activation of MAPK activity	protein metabolism	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	positive regulation of stress-activated MAPK cascade	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	inflammatory response	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	induction of apoptosis	death	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	stress-activated MAPK cascade	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	stress-activated MAPK cascade	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	toll-like receptor 3 signaling pathway	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	innate immune response	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	signal transduction	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	detection of biotic stimulus	other biological processes	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	detection of bacterium	other biological processes	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	MyD88-dependent toll-like receptor signaling pathway	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	toll-like receptor 2 signaling pathway	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	toll-like receptor 2 signaling pathway	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	positive regulation of tumor necrosis factor production	other biological processes	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	regulation of apoptosis	death	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	positive regulation of interleukin-6 production	other biological processes	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	toll-like receptor 4 signaling pathway	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	protein oligomerization	cell organization and biogenesis	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	toll-like receptor 1 signaling pathway	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	toll-like receptor 1 signaling pathway	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	defense response	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	apoptosis	death	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	toll-like receptor 4 signaling pathway	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	JNK cascade	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	JNK cascade	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	defense response to Gram-positive bacterium	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	positive regulation of JNK cascade	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	positive regulation of JNK cascade	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	nucleotide-binding oligomerization domain containing signaling pathway	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	nucleotide-binding oligomerization domain containing signaling pathway	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	MyD88-independent toll-like receptor signaling pathway	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	MyD88-independent toll-like receptor signaling pathway	stress response	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c24842	positive regulation of ERK1 and ERK2 cascade	signal transduction	P	Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4)
ruditapes_c14476	DNA strand elongation during DNA replication	DNA metabolism	P	DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c14476	DNA replication	DNA metabolism	P	DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c14476	mitotic cell cycle	cell cycle and proliferation	P	DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c14476	S phase of mitotic cell cycle	cell cycle and proliferation	P	DNA replication complex GINS protein PSF2 (GINS complex subunit 2)
ruditapes_c12797	angiogenesis	developmental processes	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	negative regulation of angiogenesis	developmental processes	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	negative regulation of blood vessel endothelial cell migration	other biological processes	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	endothelial cell proliferation	cell cycle and proliferation	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	positive regulation of peptidyl-tyrosine phosphorylation	protein metabolism	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	positive regulation of angiogenesis	developmental processes	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	leukocyte migration	other biological processes	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	signal transduction	signal transduction	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	anti-apoptosis	death	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	positive regulation of blood vessel endothelial cell migration	other biological processes	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	blood coagulation	stress response	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	positive regulation of endothelial cell migration	other biological processes	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c12797	negative regulation of apoptosis	death	P	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)
ruditapes_c14366	pantothenate metabolic process	other metabolic processes	P	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)
ruditapes_c14366	water-soluble vitamin metabolic process	other metabolic processes	P	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)
ruditapes_c14366	transmembrane transport	transport	P	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)
ruditapes_c14366	biotin metabolic process	other metabolic processes	P	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)
ruditapes_c14366	vitamin metabolic process	other metabolic processes	P	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)
ruditapes_c14366	biotin transport	transport	P	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)
ruditapes_c14366	sodium ion transport	transport	P	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)
ruditapes_c14366	ion transport	transport	P	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)
ruditapes_c14366	transport	transport	P	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)
ruditapes_c14366	pantothenate transport	transport	P	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)
ruditapes2_lrc7638	toll-like receptor 1 signaling pathway	signal transduction	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	toll-like receptor 1 signaling pathway	stress response	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	positive regulation of interleukin-6 biosynthetic process	other metabolic processes	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	toll-like receptor signaling pathway	signal transduction	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	toll-like receptor signaling pathway	stress response	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	signal transduction	signal transduction	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	activation of NF-kappaB-inducing kinase activity	signal transduction	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	activation of NF-kappaB-inducing kinase activity	other metabolic processes	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	inflammatory response	stress response	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	defense response to bacterium	stress response	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	toll-like receptor 4 signaling pathway	signal transduction	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	toll-like receptor 4 signaling pathway	stress response	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	MyD88-dependent toll-like receptor signaling pathway	signal transduction	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	MyD88-dependent toll-like receptor signaling pathway	stress response	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	Toll signaling pathway	signal transduction	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	T-helper 1 type immune response	other biological processes	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	immune response	other biological processes	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	detection of diacylated bacterial lipoprotein	other biological processes	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	innate immune response	stress response	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	positive regulation of JUN kinase activity	signal transduction	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	positive regulation of JUN kinase activity	stress response	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	positive regulation of JUN kinase activity	protein metabolism	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	toll-like receptor 2 signaling pathway	signal transduction	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_lrc7638	toll-like receptor 2 signaling pathway	stress response	P	Toll-like receptor 6 (CD antigen CD286)
ruditapes2_c873	protein transport	transport	P	Syntaxin-binding protein 5-like (Lethal(2) giant larvae protein homolog 4) (Tomosyn-2)
ruditapes2_c873	transport	transport	P	Syntaxin-binding protein 5-like (Lethal(2) giant larvae protein homolog 4) (Tomosyn-2)
ruditapes2_c873	vesicle-mediated transport	transport	P	Syntaxin-binding protein 5-like (Lethal(2) giant larvae protein homolog 4) (Tomosyn-2)
ruditapes2_c873	exocytosis	transport	P	Syntaxin-binding protein 5-like (Lethal(2) giant larvae protein homolog 4) (Tomosyn-2)
ruditapes_c21224	gene expression	other metabolic processes	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c21224	rRNA catabolic process	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c25876	gene expression	other metabolic processes	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c25876	rRNA catabolic process	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c21224	RNA metabolic process	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c25876	RNA metabolic process	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c21224	rRNA processing	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c25876	rRNA processing	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c21224	exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c25876	"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay"	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c21224	"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay"	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c21224	mRNA metabolic process	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c25876	exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes_c25876	mRNA metabolic process	RNA metabolism	P	Exosome complex exonuclease RRP44 (EC 3.1.13.-) (EC 3.1.26.-) (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)
ruditapes2_c966	activation of MAPKK activity	signal transduction	P	Ragulator complex protein LAMTOR2 (Endosomal adaptor protein p14) (Late endosomal/lysosomal Mp1-interacting protein) (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2) (Mitogen-activated protein-binding protein-interacting protein) (Roadblock domain-containing protein 3)
ruditapes2_c966	activation of MAPKK activity	protein metabolism	P	Ragulator complex protein LAMTOR2 (Endosomal adaptor protein p14) (Late endosomal/lysosomal Mp1-interacting protein) (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2) (Mitogen-activated protein-binding protein-interacting protein) (Roadblock domain-containing protein 3)
ruditapes2_c966	cellular protein localization	other biological processes	P	Ragulator complex protein LAMTOR2 (Endosomal adaptor protein p14) (Late endosomal/lysosomal Mp1-interacting protein) (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2) (Mitogen-activated protein-binding protein-interacting protein) (Roadblock domain-containing protein 3)
ruditapes2_c966	cell growth	other biological processes	P	Ragulator complex protein LAMTOR2 (Endosomal adaptor protein p14) (Late endosomal/lysosomal Mp1-interacting protein) (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2) (Mitogen-activated protein-binding protein-interacting protein) (Roadblock domain-containing protein 3)
ruditapes2_c966	positive regulation of TOR signaling pathway	signal transduction	P	Ragulator complex protein LAMTOR2 (Endosomal adaptor protein p14) (Late endosomal/lysosomal Mp1-interacting protein) (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 2) (Mitogen-activated protein-binding protein-interacting protein) (Roadblock domain-containing protein 3)
ruditapes_c13020	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	transport	transport	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	"transcription, DNA-dependent"	RNA metabolism	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	sensory perception of pain	other biological processes	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	signal transduction	signal transduction	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	response to pain	stress response	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	sensory perception of pain	other biological processes	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	transport	transport	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	regulation of transmembrane ion transport	transport	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	regulation of neuron apoptosis	death	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	ion transport	transport	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	regulation of transmembrane ion transport	transport	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	potassium ion transport	transport	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	apoptosis	death	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	behavior	other biological processes	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	"transcription, DNA-dependent"	RNA metabolism	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	apoptosis	death	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	response to pain	stress response	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	signal transduction	signal transduction	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	ion transport	transport	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	behavior	other biological processes	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes2_c1580	regulation of neuron apoptosis	death	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c13020	potassium ion transport	transport	P	Calsenilin (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) (Kv channel-interacting protein 3) (KChIP3)
ruditapes_c17007	ribosome biogenesis	other biological processes	P	Nucleolar protein 58 (Nucleolar protein 5)
ruditapes_c17007	rRNA processing	RNA metabolism	P	Nucleolar protein 58 (Nucleolar protein 5)
ruditapes_c17007	snRNP protein import into nucleus	transport	P	Nucleolar protein 58 (Nucleolar protein 5)
ruditapes_c17007	cell growth	other biological processes	P	Nucleolar protein 58 (Nucleolar protein 5)
ruditapes_c9459	tRNA processing	RNA metabolism	P	"Protein MTO1 homolog, mitochondrial"
ruditapes_c9459	oxidation reduction	other metabolic processes	P	"Protein MTO1 homolog, mitochondrial"
ruditapes_c36522	translation	protein metabolism	P	"39S ribosomal protein L11, mitochondrial (L11mt) (MRP-L11)"
ruditapes_c429	translation	protein metabolism	P	"28S ribosomal protein S18c, mitochondrial (MRP-S18-c) (Mrps18-c) (S18mt-c) (28S ribosomal protein S18-1, mitochondrial) (MRP-S18-1)"
ruditapes_c31016	regulation of innate immune response	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-) (Dendritic cell-derived IFNG-induced protein) (DCIP) (Monocyte protein 5) (MOP-5)
ruditapes_c31016	immune response	other biological processes	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-) (Dendritic cell-derived IFNG-induced protein) (DCIP) (Monocyte protein 5) (MOP-5)
ruditapes_c31016	innate immune response	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-) (Dendritic cell-derived IFNG-induced protein) (DCIP) (Monocyte protein 5) (MOP-5)
ruditapes_c31016	metabolic process	other metabolic processes	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-) (Dendritic cell-derived IFNG-induced protein) (DCIP) (Monocyte protein 5) (MOP-5)
ruditapes_c31016	defense response to virus	stress response	P	SAM domain and HD domain-containing protein 1 (EC 3.1.4.-) (Dendritic cell-derived IFNG-induced protein) (DCIP) (Monocyte protein 5) (MOP-5)
ruditapes_s38226	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 711 (Zinc finger protein 6)
ruditapes_s38226	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 711 (Zinc finger protein 6)
ruditapes_s38226	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 711 (Zinc finger protein 6)
ruditapes_c20852	axon guidance	developmental processes	P	Talin-1
ruditapes_c20852	axon guidance	cell organization and biogenesis	P	Talin-1
ruditapes_c20852	cell-cell junction assembly	cell organization and biogenesis	P	Talin-1
ruditapes_c20852	cortical actin cytoskeleton organization	cell organization and biogenesis	P	Talin-1
ruditapes_c20852	muscle contraction	other biological processes	P	Talin-1
ruditapes_c20852	cytoskeletal anchoring at plasma membrane	cell organization and biogenesis	P	Talin-1
ruditapes_c20852	cell-substrate junction assembly	cell organization and biogenesis	P	Talin-1
ruditapes_c20852	platelet activation	stress response	P	Talin-1
ruditapes_c20852	activation of signaling protein activity involved in unfolded protein response	signal transduction	P	Talin-1
ruditapes_c20852	activation of signaling protein activity involved in unfolded protein response	stress response	P	Talin-1
ruditapes_c20852	activation of signaling protein activity involved in unfolded protein response	other metabolic processes	P	Talin-1
ruditapes_c20852	platelet degranulation	transport	P	Talin-1
ruditapes_c20852	blood coagulation	stress response	P	Talin-1
ruditapes_c20852	cell adhesion	cell adhesion	P	Talin-1
ruditapes_c20852	cell motion	other biological processes	P	Talin-1
ruditapes_c20852	endoplasmic reticulum unfolded protein response	signal transduction	P	Talin-1
ruditapes_c20852	endoplasmic reticulum unfolded protein response	stress response	P	Talin-1
ruditapes_c18162	histone acetylation	protein metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c18162	histone acetylation	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c18162	histone H2A acetylation	protein metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c18162	histone H2A acetylation	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c21781	histone H4 acetylation	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c18162	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c18162	chromatin modification	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c18162	"transcription, DNA-dependent"	RNA metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c18162	histone deubiquitination	protein metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c18162	histone deubiquitination	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c21781	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c21781	histone H2A acetylation	protein metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c21781	histone H2A acetylation	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c21781	histone H4 acetylation	protein metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c21781	histone acetylation	protein metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c21781	histone acetylation	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c18162	histone H4 acetylation	protein metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c18162	histone H4 acetylation	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c21781	histone deubiquitination	protein metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c21781	histone deubiquitination	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c21781	"transcription, DNA-dependent"	RNA metabolism	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c21781	chromatin modification	cell organization and biogenesis	P	Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog)
ruditapes_c9997	histone H3-K9 demethylation	protein metabolism	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c9997	histone H3-K9 demethylation	cell organization and biogenesis	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c9997	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c9997	formaldehyde biosynthetic process	other metabolic processes	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c9997	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c9997	chromatin modification	cell organization and biogenesis	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c9997	cell differentiation	other biological processes	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c9997	oxidation reduction	other metabolic processes	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c9997	spermatogenesis	other biological processes	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c9997	hormone-mediated signaling	signal transduction	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c9997	androgen receptor signaling pathway	signal transduction	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c9997	"transcription, DNA-dependent"	RNA metabolism	P	Lysine-specific demethylase 3A (EC 1.14.11.-) (JmjC domain-containing histone demethylation protein 2A) (Jumonji domain-containing protein 1A)
ruditapes_c10939	platelet activation	stress response	P	Sn1-specific diacylglycerol lipase alpha (DGL-alpha) (EC 3.1.1.-) (Neural stem cell-derived dendrite regulator)
ruditapes_c10939	lipid catabolic process	other metabolic processes	P	Sn1-specific diacylglycerol lipase alpha (DGL-alpha) (EC 3.1.1.-) (Neural stem cell-derived dendrite regulator)
ruditapes_c10939	cell death	death	P	Sn1-specific diacylglycerol lipase alpha (DGL-alpha) (EC 3.1.1.-) (Neural stem cell-derived dendrite regulator)
ruditapes_c10939	lipid metabolic process	other metabolic processes	P	Sn1-specific diacylglycerol lipase alpha (DGL-alpha) (EC 3.1.1.-) (Neural stem cell-derived dendrite regulator)
ruditapes_c10939	blood coagulation	stress response	P	Sn1-specific diacylglycerol lipase alpha (DGL-alpha) (EC 3.1.1.-) (Neural stem cell-derived dendrite regulator)
ruditapes_c7436	negative regulation of phosphatase activity	other metabolic processes	P	Meiosis arrest female protein 1 (Limkain-b1)
ruditapes_lrc35918	cell-cell junction assembly	cell organization and biogenesis	P	Talin-2
ruditapes_lrc35918	cell adhesion	cell adhesion	P	Talin-2
ruditapes_lrc35918	cytoskeletal anchoring at plasma membrane	cell organization and biogenesis	P	Talin-2
ruditapes_c12277	detection of chemical stimulus	other biological processes	P	UDP-glucuronosyltransferase 2A1 (UDPGT 2A1) (EC 2.4.1.17)
ruditapes_c12277	metabolic process	other metabolic processes	P	UDP-glucuronosyltransferase 2A1 (UDPGT 2A1) (EC 2.4.1.17)
ruditapes_c12277	response to stimulus	other biological processes	P	UDP-glucuronosyltransferase 2A1 (UDPGT 2A1) (EC 2.4.1.17)
ruditapes_c12277	sensory perception of smell	other biological processes	P	UDP-glucuronosyltransferase 2A1 (UDPGT 2A1) (EC 2.4.1.17)
ruditapes_c10902	cell adhesion	cell adhesion	P	Heat shock protein beta-11 (Hspb11) (Placental protein 25) (PP25)
ruditapes_c10902	response to stress	stress response	P	Heat shock protein beta-11 (Hspb11) (Placental protein 25) (PP25)
ruditapes_c7523	endocytosis	transport	P	Low-density lipoprotein receptor-related protein 12 (LRP-12) (Suppressor of tumorigenicity 7 protein)
ruditapes_c7523	endocytosis	cell organization and biogenesis	P	Low-density lipoprotein receptor-related protein 12 (LRP-12) (Suppressor of tumorigenicity 7 protein)
ruditapes_c7523	signal transduction	signal transduction	P	Low-density lipoprotein receptor-related protein 12 (LRP-12) (Suppressor of tumorigenicity 7 protein)
ruditapes_c7523	regulation of growth	other biological processes	P	Low-density lipoprotein receptor-related protein 12 (LRP-12) (Suppressor of tumorigenicity 7 protein)
ruditapes_c26142	"transcription, DNA-dependent"	RNA metabolism	P	PAX3- and PAX7-binding protein 1 (GC-rich sequence DNA-binding factor 1)
ruditapes_c26142	"regulation of transcription, DNA-dependent"	RNA metabolism	P	PAX3- and PAX7-binding protein 1 (GC-rich sequence DNA-binding factor 1)
ruditapes_c30433	calcium-dependent cell-cell adhesion	cell adhesion	P	Protocadherin beta-9 (PCDH-beta-9) (Protocadherin-3H)
ruditapes_c30433	cell adhesion	cell adhesion	P	Protocadherin beta-9 (PCDH-beta-9) (Protocadherin-3H)
ruditapes_c30433	synaptogenesis	developmental processes	P	Protocadherin beta-9 (PCDH-beta-9) (Protocadherin-3H)
ruditapes_c30433	synaptogenesis	cell organization and biogenesis	P	Protocadherin beta-9 (PCDH-beta-9) (Protocadherin-3H)
ruditapes_c30433	synaptic transmission	cell-cell signaling	P	Protocadherin beta-9 (PCDH-beta-9) (Protocadherin-3H)
ruditapes_c30433	homophilic cell adhesion	cell adhesion	P	Protocadherin beta-9 (PCDH-beta-9) (Protocadherin-3H)
ruditapes_c21712	"transcription, DNA-dependent"	RNA metabolism	P	General transcription factor 3C polypeptide 3 (Transcription factor IIIC 102 kDa subunit) (TFIIIC 102 kDa subunit) (TFIIIC102) (Transcription factor IIIC subunit gamma) (TF3C-gamma)
ruditapes_c21712	5S class rRNA transcription	RNA metabolism	P	General transcription factor 3C polypeptide 3 (Transcription factor IIIC 102 kDa subunit) (TFIIIC 102 kDa subunit) (TFIIIC102) (Transcription factor IIIC subunit gamma) (TF3C-gamma)
ruditapes_c21712	gene expression	other metabolic processes	P	General transcription factor 3C polypeptide 3 (Transcription factor IIIC 102 kDa subunit) (TFIIIC 102 kDa subunit) (TFIIIC102) (Transcription factor IIIC subunit gamma) (TF3C-gamma)
ruditapes_c21712	tRNA transcription from RNA polymerase III promoter	RNA metabolism	P	General transcription factor 3C polypeptide 3 (Transcription factor IIIC 102 kDa subunit) (TFIIIC 102 kDa subunit) (TFIIIC102) (Transcription factor IIIC subunit gamma) (TF3C-gamma)
ruditapes_c21712	transcription from RNA polymerase III promoter	RNA metabolism	P	General transcription factor 3C polypeptide 3 (Transcription factor IIIC 102 kDa subunit) (TFIIIC 102 kDa subunit) (TFIIIC102) (Transcription factor IIIC subunit gamma) (TF3C-gamma)
ruditapes_c26885	cell communication	other biological processes	P	Sorting nexin-13 (RGS domain- and PHOX domain-containing protein) (RGS-PX1)
ruditapes_c26885	transport	transport	P	Sorting nexin-13 (RGS domain- and PHOX domain-containing protein) (RGS-PX1)
ruditapes_c26885	negative regulation of signal transduction	signal transduction	P	Sorting nexin-13 (RGS domain- and PHOX domain-containing protein) (RGS-PX1)
ruditapes_c26885	protein transport	transport	P	Sorting nexin-13 (RGS domain- and PHOX domain-containing protein) (RGS-PX1)
ruditapes_c26885	intracellular protein transport	transport	P	Sorting nexin-13 (RGS domain- and PHOX domain-containing protein) (RGS-PX1)
ruditapes_c26885	positive regulation of GTPase activity	other biological processes	P	Sorting nexin-13 (RGS domain- and PHOX domain-containing protein) (RGS-PX1)
ruditapes_c20645	lipid metabolic process	other metabolic processes	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c20645	positive regulation of cholesterol transport	transport	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c20645	lipid catabolic process	other metabolic processes	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c20645	high-density lipoprotein particle remodeling	cell organization and biogenesis	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c20645	positive regulation of high-density lipoprotein particle clearance	cell organization and biogenesis	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c20645	phospholipid homeostasis	other biological processes	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c20645	response to nutrient	other biological processes	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c20645	cholesterol homeostasis	other biological processes	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c20645	reverse cholesterol transport	transport	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c20645	phospholipid catabolic process	other metabolic processes	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c20645	regulation of lipoprotein metabolic process	other metabolic processes	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c20645	cell proliferation	cell cycle and proliferation	P	Endothelial lipase (EC 3.1.1.3) (Endothelial cell-derived lipase) (EDL) (EL)
ruditapes_c6354	heparan sulfate proteoglycan metabolic process	other metabolic processes	P	Heparan sulfate glucosamine 3-O-sulfotransferase 4 (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4) (3-OST-4) (Heparan sulfate 3-O-sulfotransferase 4) (h3-OST-4)
ruditapes_c8819	positive regulation of cell-substrate adhesion	cell adhesion	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes2_lrc6949	cell adhesion	cell adhesion	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes2_lrc6949	positive regulation of cell-substrate adhesion	cell adhesion	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes_c31428	cell adhesion	cell adhesion	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes_c8819	extracellular matrix organization	cell organization and biogenesis	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes2_lrc6949	extracellular matrix organization	cell organization and biogenesis	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes_c31428	positive regulation of cell-substrate adhesion	cell adhesion	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes2_c925	cell adhesion	cell adhesion	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes2_c925	extracellular matrix organization	cell organization and biogenesis	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes2_c925	positive regulation of cell-substrate adhesion	cell adhesion	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes_c8819	cell adhesion	cell adhesion	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes_c31428	extracellular matrix organization	cell organization and biogenesis	P	EMILIN-1 (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1)
ruditapes_c25516	double-strand break repair via nonhomologous end joining	stress response	P	Mitochondrial inner membrane protease ATP23 homolog (EC 3.4.24.-) (Ku70-binding protein 3) (XRCC6-binding protein 1)
ruditapes_c25516	double-strand break repair via nonhomologous end joining	DNA metabolism	P	Mitochondrial inner membrane protease ATP23 homolog (EC 3.4.24.-) (Ku70-binding protein 3) (XRCC6-binding protein 1)
ruditapes_c25516	proteolysis	protein metabolism	P	Mitochondrial inner membrane protease ATP23 homolog (EC 3.4.24.-) (Ku70-binding protein 3) (XRCC6-binding protein 1)
ruditapes_c6196	biological_process	other biological processes	P	WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS box-containing WD protein SWiP-1)
ruditapes_c1090	biological_process	other biological processes	P	WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS box-containing WD protein SWiP-1)
ruditapes2_c3398	biological_process	other biological processes	P	WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS box-containing WD protein SWiP-1)
ruditapes_c5264	biological_process	other biological processes	P	WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS box-containing WD protein SWiP-1)
ruditapes_c16100	regulation of transcription factor activity	RNA metabolism	P	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65-alpha) (PAF65-alpha)
ruditapes_c16100	"transcription, DNA-dependent"	RNA metabolism	P	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65-alpha) (PAF65-alpha)
ruditapes_c16100	histone H3 acetylation	cell organization and biogenesis	P	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65-alpha) (PAF65-alpha)
ruditapes_c16100	transcription initiation	RNA metabolism	P	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65-alpha) (PAF65-alpha)
ruditapes_c16100	transcription initiation	cell organization and biogenesis	P	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65-alpha) (PAF65-alpha)
ruditapes_c16100	regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65-alpha) (PAF65-alpha)
ruditapes_c16100	"regulation of transcription, DNA-dependent"	RNA metabolism	P	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65-alpha) (PAF65-alpha)
ruditapes_c16100	chromatin remodeling	cell organization and biogenesis	P	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65-alpha) (PAF65-alpha)
ruditapes_c16100	histone H3 acetylation	protein metabolism	P	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65-alpha) (PAF65-alpha)
ruditapes_c31378	"nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"	other metabolic processes	P	2'-5'-oligoadenylate synthase 3 ((2-5')oligo(A) synthase 3) (2-5A synthase 3) (EC 2.7.7.84) (p100 OAS) (p100OAS)
ruditapes_c31378	immune response	other biological processes	P	2'-5'-oligoadenylate synthase 3 ((2-5')oligo(A) synthase 3) (2-5A synthase 3) (EC 2.7.7.84) (p100 OAS) (p100OAS)
ruditapes_c31378	cytokine-mediated signaling pathway	signal transduction	P	2'-5'-oligoadenylate synthase 3 ((2-5')oligo(A) synthase 3) (2-5A synthase 3) (EC 2.7.7.84) (p100 OAS) (p100OAS)
ruditapes_c31378	type I interferon-mediated signaling pathway	signal transduction	P	2'-5'-oligoadenylate synthase 3 ((2-5')oligo(A) synthase 3) (2-5A synthase 3) (EC 2.7.7.84) (p100 OAS) (p100OAS)
ruditapes_c31378	negative regulation of viral genome replication	other biological processes	P	2'-5'-oligoadenylate synthase 3 ((2-5')oligo(A) synthase 3) (2-5A synthase 3) (EC 2.7.7.84) (p100 OAS) (p100OAS)
ruditapes_c31378	interferon-gamma-mediated signaling pathway	signal transduction	P	2'-5'-oligoadenylate synthase 3 ((2-5')oligo(A) synthase 3) (2-5A synthase 3) (EC 2.7.7.84) (p100 OAS) (p100OAS)
ruditapes_c31378	regulation of ribonuclease activity	other biological processes	P	2'-5'-oligoadenylate synthase 3 ((2-5')oligo(A) synthase 3) (2-5A synthase 3) (EC 2.7.7.84) (p100 OAS) (p100OAS)
ruditapes_c31378	defense response to virus	stress response	P	2'-5'-oligoadenylate synthase 3 ((2-5')oligo(A) synthase 3) (2-5A synthase 3) (EC 2.7.7.84) (p100 OAS) (p100OAS)
ruditapes_c3193	cell differentiation	other biological processes	P	Tolloid-like protein 2 (EC 3.4.24.-)
ruditapes_c3193	multicellular organismal development	developmental processes	P	Tolloid-like protein 2 (EC 3.4.24.-)
ruditapes_c3193	proteolysis	protein metabolism	P	Tolloid-like protein 2 (EC 3.4.24.-)
ruditapes_c21069	respiratory chain complex IV assembly	cell organization and biogenesis	P	"Cytochrome c oxidase assembly protein COX11, mitochondrial"
ruditapes_c21069	respiratory gaseous exchange	other biological processes	P	"Cytochrome c oxidase assembly protein COX11, mitochondrial"
ruditapes_c14027	sulfur amino acid catabolic process	other metabolic processes	P	"Sulfide:quinone oxidoreductase, mitochondrial (EC 1.-.-.-)"
ruditapes_c14027	sulfur amino acid metabolic process	other metabolic processes	P	"Sulfide:quinone oxidoreductase, mitochondrial (EC 1.-.-.-)"
ruditapes_c14027	"sulfide oxidation, using sulfide:quinone oxidoreductase"	other metabolic processes	P	"Sulfide:quinone oxidoreductase, mitochondrial (EC 1.-.-.-)"
ruditapes_c14027	cellular nitrogen compound metabolic process	other metabolic processes	P	"Sulfide:quinone oxidoreductase, mitochondrial (EC 1.-.-.-)"
ruditapes_c14027	oxidation reduction	other metabolic processes	P	"Sulfide:quinone oxidoreductase, mitochondrial (EC 1.-.-.-)"
ruditapes_c19910	negative regulation of S phase of mitotic cell cycle	cell cycle and proliferation	P	Unconventional myosin-XVI (Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3) (Unconventional myosin-16)
ruditapes_c19910	negative regulation of cell proliferation	cell cycle and proliferation	P	Unconventional myosin-XVI (Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3) (Unconventional myosin-16)
ruditapes_c19910	cerebellum development	developmental processes	P	Unconventional myosin-XVI (Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3) (Unconventional myosin-16)
ruditapes_c31401	ascospore wall assembly	cell organization and biogenesis	P	"Cell wall alpha-1,3-glucan synthase mok14 (EC 2.4.1.183)"
ruditapes_c19662	biosynthetic process	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok14 (EC 2.4.1.183)"
ruditapes_c31401	cell wall organization	cell organization and biogenesis	P	"Cell wall alpha-1,3-glucan synthase mok14 (EC 2.4.1.183)"
ruditapes_c19662	alpha-glucan biosynthetic process	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok14 (EC 2.4.1.183)"
ruditapes_c31401	biosynthetic process	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok14 (EC 2.4.1.183)"
ruditapes_c19662	cell wall organization	cell organization and biogenesis	P	"Cell wall alpha-1,3-glucan synthase mok14 (EC 2.4.1.183)"
ruditapes_c31401	alpha-glucan biosynthetic process	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok14 (EC 2.4.1.183)"
ruditapes_c31401	"1,4-alpha-glucan biosynthetic process"	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok14 (EC 2.4.1.183)"
ruditapes_c19662	"1,4-alpha-glucan biosynthetic process"	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok14 (EC 2.4.1.183)"
ruditapes_c19662	ascospore wall assembly	cell organization and biogenesis	P	"Cell wall alpha-1,3-glucan synthase mok14 (EC 2.4.1.183)"
ruditapes_c18031	ascospore wall assembly	cell organization and biogenesis	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_c18031	cell wall organization	cell organization and biogenesis	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_c18031	"fungal-type cell wall 1,3-alpha-glucan biosynthetic process"	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_c18031	cellular response to stress	stress response	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_c18031	carbohydrate metabolic process	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_c10314	carbohydrate metabolic process	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_c10314	biosynthetic process	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_c10314	"fungal-type cell wall 1,3-alpha-glucan biosynthetic process"	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_c10314	ascospore wall assembly	cell organization and biogenesis	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_c10314	cell wall organization	cell organization and biogenesis	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_c18031	biosynthetic process	other metabolic processes	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_c10314	cellular response to stress	stress response	P	"Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)"
ruditapes_lrc39937	DNA replication	DNA metabolism	P	"DNA polymerase gamma, mitochondrial (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit)"
ruditapes_c24332	regulation of actin filament polymerization	protein metabolism	P	Actin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c24332	regulation of actin filament polymerization	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c24332	Arp2/3 complex-mediated actin nucleation	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c24332	actin cortical patch assembly	cell organization and biogenesis	P	Actin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit) (p21-ARC)
ruditapes_c21390	response to DNA damage stimulus	stress response	P	Uncharacterized protein C216.01c
ruditapes_c26463	oxidation reduction	other metabolic processes	P	Meiotically up-regulated gene 72 protein
ruditapes_c26463	meiosis	cell cycle and proliferation	P	Meiotically up-regulated gene 72 protein
ruditapes_c7914	biological_process	other biological processes	P	Uncharacterized protein C191.03c
ruditapes_c19219	transport	transport	P	Probable metabolite transporter C2H8.02
ruditapes_c19219	transmembrane transport	transport	P	Probable metabolite transporter C2H8.02
ruditapes2_c1968	protein amino acid N-linked glycosylation	protein metabolism	P	Dolichol kinase sec59 (EC 2.7.1.108)
ruditapes_c27435	DNA-dependent DNA replication	DNA metabolism	P	KIN17-like protein
ruditapes_c14248	"cytokinesis during cell cycle, site selection"	cell cycle and proliferation	P	Tetra-spanning protein 1
ruditapes_c14248	cell division	other biological processes	P	Tetra-spanning protein 1
ruditapes_c14248	cellular response to stress	stress response	P	Tetra-spanning protein 1
ruditapes_c14248	cell cycle	cell cycle and proliferation	P	Tetra-spanning protein 1
ruditapes_c14248	cellular protein localization	other biological processes	P	Tetra-spanning protein 1
ruditapes_c5755	transport	transport	P	Secretory component protein psh3
ruditapes_c5755	vesicle-mediated transport	transport	P	Secretory component protein psh3
ruditapes_c5755	protein transport	transport	P	Secretory component protein psh3
ruditapes_c5755	ER to Golgi vesicle-mediated transport	transport	P	Secretory component protein psh3
ruditapes_c18787	folic acid and derivative biosynthetic process	other metabolic processes	P	Folylpolyglutamate synthase (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS) (Tetrahydrofolylpolyglutamate synthase) (Tetrahydrofolate synthase)
ruditapes_c18787	one-carbon compound metabolic process	other metabolic processes	P	Folylpolyglutamate synthase (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS) (Tetrahydrofolylpolyglutamate synthase) (Tetrahydrofolate synthase)
ruditapes_c18787	tetrahydrofolylpolyglutamate biosynthetic process	other metabolic processes	P	Folylpolyglutamate synthase (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS) (Tetrahydrofolylpolyglutamate synthase) (Tetrahydrofolate synthase)
ruditapes_c18787	biosynthetic process	other metabolic processes	P	Folylpolyglutamate synthase (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS) (Tetrahydrofolylpolyglutamate synthase) (Tetrahydrofolate synthase)
ruditapes_c3237	proteolysis	protein metabolism	P	Dipeptidyl-peptidase 5 (EC 3.4.14.-) (Alanyl dipeptidyl peptidase) (Dipeptidyl-peptidase V) (DPP V) (DppV)
ruditapes_c19916	metabolic process	other metabolic processes	P	Glyoxylate reductase (EC 1.1.1.26)
ruditapes_c19916	oxidation reduction	other metabolic processes	P	Glyoxylate reductase (EC 1.1.1.26)
ruditapes_c22972	DNA replication	DNA metabolism	P	Replication factor C small subunit (RFC small subunit) (Clamp loader small subunit)
ruditapes_c10562	tRNA processing	RNA metabolism	P	Ribonuclease P protein component 4 (RNase P component 4) (EC 3.1.26.5)
ruditapes_c10562	tRNA 5'-leader removal	RNA metabolism	P	Ribonuclease P protein component 4 (RNase P component 4) (EC 3.1.26.5)
ruditapes_c15503	DNA replication	DNA metabolism	P	ORC1-type DNA replication protein 2 (ORC2)
ruditapes_c14811	cation transport	transport	P	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 (ChkSERCA3) (SERCA3) (SR Ca(2+)-ATPase 3) (EC 3.6.3.8) (Calcium pump 3)
ruditapes_c14811	metabolic process	other metabolic processes	P	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 (ChkSERCA3) (SERCA3) (SR Ca(2+)-ATPase 3) (EC 3.6.3.8) (Calcium pump 3)
ruditapes_c14811	ATP biosynthetic process	other metabolic processes	P	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 (ChkSERCA3) (SERCA3) (SR Ca(2+)-ATPase 3) (EC 3.6.3.8) (Calcium pump 3)
ruditapes_c14811	ion transport	transport	P	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 (ChkSERCA3) (SERCA3) (SR Ca(2+)-ATPase 3) (EC 3.6.3.8) (Calcium pump 3)
ruditapes_c14811	transport	transport	P	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 (ChkSERCA3) (SERCA3) (SR Ca(2+)-ATPase 3) (EC 3.6.3.8) (Calcium pump 3)
ruditapes_c14811	calcium ion transport	transport	P	Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 (ChkSERCA3) (SERCA3) (SR Ca(2+)-ATPase 3) (EC 3.6.3.8) (Calcium pump 3)
ruditapes_lrc33163	biological_process	other biological processes	P	Caveolin-1
ruditapes2_lrc6151	biological_process	other biological processes	P	Caveolin-1
ruditapes_s37303	biological_process	other biological processes	P	Caveolin-1
ruditapes_s37303	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes2_lrc6151	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_lrc33163	T cell costimulation	other biological processes	P	Caveolin-1
ruditapes_c15750	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein Hox-C12b
ruditapes_c15750	"transcription, DNA-dependent"	RNA metabolism	P	Homeobox protein Hox-C12b
ruditapes_c15750	multicellular organismal development	developmental processes	P	Homeobox protein Hox-C12b
ruditapes_c25873	multicellular organismal development	developmental processes	P	Follistatin-A (FS) (Activin-binding protein) (Follistatin-1) (zFst1)
ruditapes_c25873	midbrain development	developmental processes	P	Follistatin-A (FS) (Activin-binding protein) (Follistatin-1) (zFst1)
ruditapes_c25873	dorsal/ventral pattern formation	developmental processes	P	Follistatin-A (FS) (Activin-binding protein) (Follistatin-1) (zFst1)
ruditapes_c25873	determination of dorsal identity	developmental processes	P	Follistatin-A (FS) (Activin-binding protein) (Follistatin-1) (zFst1)
ruditapes_c25873	oocyte differentiation	other biological processes	P	Follistatin-A (FS) (Activin-binding protein) (Follistatin-1) (zFst1)
ruditapes_c21203	arginine biosynthetic process via ornithine	other metabolic processes	P	"Ornithine carbamoyltransferase, mitochondrial (EC 2.1.3.3) (Ornithine transcarbamylase) (OTCase)"
ruditapes_c21203	arginine biosynthetic process	other metabolic processes	P	"Ornithine carbamoyltransferase, mitochondrial (EC 2.1.3.3) (Ornithine transcarbamylase) (OTCase)"
ruditapes_c21203	arginine metabolic process	other metabolic processes	P	"Ornithine carbamoyltransferase, mitochondrial (EC 2.1.3.3) (Ornithine transcarbamylase) (OTCase)"
ruditapes_c21203	ornithine metabolic process	other metabolic processes	P	"Ornithine carbamoyltransferase, mitochondrial (EC 2.1.3.3) (Ornithine transcarbamylase) (OTCase)"
ruditapes_c21203	cellular amino acid metabolic process	other metabolic processes	P	"Ornithine carbamoyltransferase, mitochondrial (EC 2.1.3.3) (Ornithine transcarbamylase) (OTCase)"
ruditapes_c21203	cellular amino acid biosynthetic process	other metabolic processes	P	"Ornithine carbamoyltransferase, mitochondrial (EC 2.1.3.3) (Ornithine transcarbamylase) (OTCase)"
ruditapes_c21203	urea cycle	other metabolic processes	P	"Ornithine carbamoyltransferase, mitochondrial (EC 2.1.3.3) (Ornithine transcarbamylase) (OTCase)"
ruditapes_lrc30030	viral genome replication	other biological processes	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_c15162	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_lrc30030	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_c15162	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_lrc30030	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_c15162	viral genome replication	other biological processes	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_c15162	proteolysis	protein metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_c15162	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_lrc30030	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes_lrc30030	proteolysis	protein metabolism	P	Genome polyprotein 1 [Cleaved into: Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (CI) (EC 3.6.4.-); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (NI-a) (NIa) (EC 3.4.22.44) (NIa-pro); Nuclear inclusion protein B (NI-b) (NIb) (EC 2.7.7.48) (RNA-directed RNA polymerase); Capsid protein (CP) (Coat protein)]
ruditapes2_c1881	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c1881	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c27517	viral genome replication	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c27517	ion transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c1881	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c1881	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c27517	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c1881	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c27517	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c1881	proteolysis	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c27517	interspecies interaction between organisms	other biological processes	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c1881	RNA biosynthetic process	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c27517	RNA-protein covalent cross-linking	protein metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c27517	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes2_c1881	transport	transport	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c27517	"transcription, DNA-dependent"	RNA metabolism	P	Genome polyprotein [Cleaved into: Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Virion protein 4); Protein VP2 (P1B) (Virion protein 2); Protein VP3 (P1C) (Virion protein 3); Protein VP1 (P1D) (Virion protein 1); Protein 2A (P2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (P3D-POL) (EC 2.7.7.48)]
ruditapes_c24666	"transcription, DNA-dependent"	RNA metabolism	P	RNA helicase NPH-II (EC 3.6.4.13) (Nucleoside triphosphatase II) (NTPase II) (Nucleoside triphosphate phosphohydrolase II) (NPH II)
ruditapes_c26220	chromatin assembly	cell organization and biogenesis	P	Meiosis 1 arrest protein (Meiosis 1-arresting protein) (Meiosis 1-associated protein) (Spermatogenesis-associated protein 37)
ruditapes_c26220	spermatogenesis	other biological processes	P	Meiosis 1 arrest protein (Meiosis 1-arresting protein) (Meiosis 1-associated protein) (Spermatogenesis-associated protein 37)
ruditapes_c26220	female gamete generation	other biological processes	P	Meiosis 1 arrest protein (Meiosis 1-arresting protein) (Meiosis 1-associated protein) (Spermatogenesis-associated protein 37)
ruditapes_c26220	RNA processing	RNA metabolism	P	Meiosis 1 arrest protein (Meiosis 1-arresting protein) (Meiosis 1-associated protein) (Spermatogenesis-associated protein 37)
ruditapes_c16928	I-kappaB kinase/NF-kappaB cascade	signal transduction	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	innate immune response	stress response	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	protein oligomerization	cell organization and biogenesis	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	response to fungus	other biological processes	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	mast cell activation	other biological processes	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	immunoglobulin mediated immune response	other biological processes	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	protein homooligomerization	cell organization and biogenesis	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	positive regulation of phosphorylation	other metabolic processes	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	positive regulation of NF-kappaB transcription factor activity	RNA metabolism	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	T cell receptor signaling pathway	signal transduction	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	cellular defense response	stress response	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	cell death	death	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	response to chemical stimulus	other biological processes	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	negative regulation of mature B cell apoptosis	death	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	positive regulation of I-kappaB kinase/NF-kappaB cascade	signal transduction	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	neural tube closure	developmental processes	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	regulation of T cell receptor signaling pathway	signal transduction	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	positive regulation of protein ubiquitination	protein metabolism	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	response to molecule of bacterial origin	other biological processes	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	positive regulation of T cell activation	other biological processes	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	regulation of apoptosis	death	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	apoptosis	death	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_c16928	positive regulation of interleukin-8 biosynthetic process	other metabolic processes	P	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (mCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (mCIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)
ruditapes_lrc28365	negative regulation of endopeptidase activity	other biological processes	P	Reversion-inducing cysteine-rich protein with Kazal motifs (mRECK)
ruditapes_lrc28365	negative regulation of peptidase activity	other biological processes	P	Reversion-inducing cysteine-rich protein with Kazal motifs (mRECK)
ruditapes_lrc28365	extracellular matrix organization	cell organization and biogenesis	P	Reversion-inducing cysteine-rich protein with Kazal motifs (mRECK)
ruditapes_lrc28365	blood vessel maturation	developmental processes	P	Reversion-inducing cysteine-rich protein with Kazal motifs (mRECK)
ruditapes_c17103	negative regulation of smoothened signaling pathway	signal transduction	P	Suppressor of fused homolog
ruditapes_c17103	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Suppressor of fused homolog
ruditapes_c17103	determination of left/right symmetry	developmental processes	P	Suppressor of fused homolog
ruditapes_c17103	heart looping	developmental processes	P	Suppressor of fused homolog
ruditapes_c17103	neural tube closure	developmental processes	P	Suppressor of fused homolog
ruditapes_c17103	spinal cord dorsal/ventral patterning	developmental processes	P	Suppressor of fused homolog
ruditapes_c17103	skin development	developmental processes	P	Suppressor of fused homolog
ruditapes_c11446	iron ion homeostasis	other biological processes	P	Hephaestin (EC 1.-.-.-)
ruditapes_c11446	ion transport	transport	P	Hephaestin (EC 1.-.-.-)
ruditapes_c11446	transport	transport	P	Hephaestin (EC 1.-.-.-)
ruditapes_c11446	oxidation reduction	other metabolic processes	P	Hephaestin (EC 1.-.-.-)
ruditapes_c11446	copper ion transport	transport	P	Hephaestin (EC 1.-.-.-)
ruditapes_c11446	iron ion transport	transport	P	Hephaestin (EC 1.-.-.-)
ruditapes_c20945	microvillus assembly	cell organization and biogenesis	P	Krueppel-like factor 5 (Basic transcription element-binding protein 2) (BTE-binding protein 2) (Intestinal-enriched krueppel-like factor) (Transcription factor BTEB2)
ruditapes_c20945	positive regulation of cell proliferation	cell cycle and proliferation	P	Krueppel-like factor 5 (Basic transcription element-binding protein 2) (BTE-binding protein 2) (Intestinal-enriched krueppel-like factor) (Transcription factor BTEB2)
ruditapes_c20945	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Krueppel-like factor 5 (Basic transcription element-binding protein 2) (BTE-binding protein 2) (Intestinal-enriched krueppel-like factor) (Transcription factor BTEB2)
ruditapes_c20945	angiogenesis	developmental processes	P	Krueppel-like factor 5 (Basic transcription element-binding protein 2) (BTE-binding protein 2) (Intestinal-enriched krueppel-like factor) (Transcription factor BTEB2)
ruditapes_c20945	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Krueppel-like factor 5 (Basic transcription element-binding protein 2) (BTE-binding protein 2) (Intestinal-enriched krueppel-like factor) (Transcription factor BTEB2)
ruditapes_c20945	"transcription, DNA-dependent"	RNA metabolism	P	Krueppel-like factor 5 (Basic transcription element-binding protein 2) (BTE-binding protein 2) (Intestinal-enriched krueppel-like factor) (Transcription factor BTEB2)
ruditapes_c16333	chromatin modification	cell organization and biogenesis	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c14626	"regulation of transcription, DNA-dependent"	RNA metabolism	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c14626	chromatin remodeling	cell organization and biogenesis	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c16333	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c16333	"regulation of transcription, DNA-dependent"	RNA metabolism	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c14626	cell cycle	cell cycle and proliferation	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c16333	cell cycle	cell cycle and proliferation	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c14626	chromatin modification	cell organization and biogenesis	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c14626	"transcription, DNA-dependent"	RNA metabolism	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c14626	establishment or maintenance of chromatin architecture	cell organization and biogenesis	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c16333	chromatin remodeling	cell organization and biogenesis	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c16333	"transcription, DNA-dependent"	RNA metabolism	P	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (BRCA2-associated factor 35) (HMG box-containing protein 20B) (Structural DNA-binding protein BRAF35)
ruditapes_c9517	oxidation reduction	other metabolic processes	P	Lysyl oxidase homolog 3 (EC 1.4.3.-) (Lysyl oxidase-like protein 3) (Lysyl oxidase-related protein 2)
ruditapes_c9517	biological_process	other biological processes	P	Lysyl oxidase homolog 3 (EC 1.4.3.-) (Lysyl oxidase-like protein 3) (Lysyl oxidase-related protein 2)
ruditapes_s38418	biological_process	other biological processes	P	SHC SH2 domain-binding protein 1 (Protein expressed in activated lymphocytes) (mPAL) (SHC-binding protein)
ruditapes_c15281	myoblast fusion	developmental processes	P	Dual specificity tyrosine-phosphorylation-regulated kinase 1B (EC 2.7.12.1)
ruditapes_c15281	myoblast fusion	cell organization and biogenesis	P	Dual specificity tyrosine-phosphorylation-regulated kinase 1B (EC 2.7.12.1)
ruditapes_c15281	phosphorylation	other metabolic processes	P	Dual specificity tyrosine-phosphorylation-regulated kinase 1B (EC 2.7.12.1)
ruditapes_c15281	protein amino acid phosphorylation	protein metabolism	P	Dual specificity tyrosine-phosphorylation-regulated kinase 1B (EC 2.7.12.1)
ruditapes_c15281	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Dual specificity tyrosine-phosphorylation-regulated kinase 1B (EC 2.7.12.1)
ruditapes_c37712	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase Mu 5 (EC 2.5.1.18) (GST class-mu 5)
ruditapes2_c352	response to estrogen stimulus	other biological processes	P	Glutathione S-transferase Mu 5 (EC 2.5.1.18) (GST class-mu 5)
ruditapes2_c352	biological_process	other biological processes	P	Glutathione S-transferase Mu 5 (EC 2.5.1.18) (GST class-mu 5)
ruditapes2_c352	metabolic process	other metabolic processes	P	Glutathione S-transferase Mu 5 (EC 2.5.1.18) (GST class-mu 5)
ruditapes2_c352	glutathione metabolic process	other metabolic processes	P	Glutathione S-transferase Mu 5 (EC 2.5.1.18) (GST class-mu 5)
ruditapes_c37712	metabolic process	other metabolic processes	P	Glutathione S-transferase Mu 5 (EC 2.5.1.18) (GST class-mu 5)
ruditapes_c37712	response to estrogen stimulus	other biological processes	P	Glutathione S-transferase Mu 5 (EC 2.5.1.18) (GST class-mu 5)
ruditapes_c37712	biological_process	other biological processes	P	Glutathione S-transferase Mu 5 (EC 2.5.1.18) (GST class-mu 5)
ruditapes_lrc38864	ATP synthesis coupled electron transport	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc33034	ATP synthesis coupled electron transport	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c6074	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc38864	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c6074	ATP synthesis coupled electron transport	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc33034	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc35989	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c4466	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c6074	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc33034	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c3702	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc35989	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c2935	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc35989	ATP synthesis coupled electron transport	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c6074	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c2935	ATP synthesis coupled electron transport	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc38864	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c3702	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c4466	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc33034	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c3702	ATP synthesis coupled electron transport	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c4466	ATP synthesis coupled electron transport	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc35989	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c4466	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc38864	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c2935	electron transport chain	other metabolic processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c3702	transport	transport	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes2_c2935	biological_process	other biological processes	P	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)
ruditapes_lrc9477	protein amino acid autophosphorylation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	fat cell differentiation	other biological processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	negative regulation of myelination	developmental processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	activation of caspase activity	death	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	endoplasmic reticulum organization	cell organization and biogenesis	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	endocrine pancreas development	developmental processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	translation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	response to endoplasmic reticulum stress	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	SREBP-mediated signaling pathway	signal transduction	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	positive regulation of protein binding	other biological processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	response to stress	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	lactation	developmental processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	insulin-like growth factor receptor signaling pathway	signal transduction	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	protein amino acid phosphorylation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	positive regulation of signal transduction	signal transduction	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	regulation of fatty acid metabolic process	other metabolic processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	negative regulation of translation	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	ossification	developmental processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	endoplasmic reticulum unfolded protein response	signal transduction	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	endoplasmic reticulum unfolded protein response	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	negative regulation of translation in response to stress	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	negative regulation of translation in response to stress	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	phosphorylation	other metabolic processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	bone mineralization	developmental processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	apoptosis	death	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	skeletal system development	developmental processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	ER overload response	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	pancreas development	developmental processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	protein homooligomerization	cell organization and biogenesis	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	negative regulation of translational initiation in response to stress	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	negative regulation of translational initiation in response to stress	protein metabolism	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	virus-infected cell apoptosis	death	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	response to unfolded protein	stress response	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	calcium-mediated signaling	signal transduction	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	insulin secretion	transport	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	insulin secretion	cell-cell signaling	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	chondrocyte development	developmental processes	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_lrc9477	ER overload response	signal transduction	P	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase)
ruditapes_c21070	exocytosis	transport	P	Protein lin-7 homolog B (Lin-7B) (Mammalian lin-seven protein 2) (MALS-2) (Vertebrate lin-7 homolog 2) (Veli-2)
ruditapes_c21070	protein transport	transport	P	Protein lin-7 homolog B (Lin-7B) (Mammalian lin-seven protein 2) (MALS-2) (Vertebrate lin-7 homolog 2) (Veli-2)
ruditapes_c21070	transport	transport	P	Protein lin-7 homolog B (Lin-7B) (Mammalian lin-seven protein 2) (MALS-2) (Vertebrate lin-7 homolog 2) (Veli-2)
ruditapes_c21070	cell-cell junction assembly	cell organization and biogenesis	P	Protein lin-7 homolog B (Lin-7B) (Mammalian lin-seven protein 2) (MALS-2) (Vertebrate lin-7 homolog 2) (Veli-2)
ruditapes_c21070	neurotransmitter secretion	transport	P	Protein lin-7 homolog B (Lin-7B) (Mammalian lin-seven protein 2) (MALS-2) (Vertebrate lin-7 homolog 2) (Veli-2)
ruditapes_c21070	neurotransmitter secretion	cell-cell signaling	P	Protein lin-7 homolog B (Lin-7B) (Mammalian lin-seven protein 2) (MALS-2) (Vertebrate lin-7 homolog 2) (Veli-2)
ruditapes_c19053	response to DNA damage stimulus	stress response	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	ATP-dependent chromatin remodeling	cell organization and biogenesis	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	nucleosome disassembly	cell organization and biogenesis	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	chromatin assembly or disassembly	cell organization and biogenesis	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	heart morphogenesis	developmental processes	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	histone phosphorylation	protein metabolism	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	chromatin-mediated maintenance of transcription	cell organization and biogenesis	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	double-strand break repair	stress response	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	double-strand break repair	DNA metabolism	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	"transcription, DNA-dependent"	RNA metabolism	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	histone phosphorylation	cell organization and biogenesis	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	chromatin remodeling	cell organization and biogenesis	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	DNA replication-dependent nucleosome disassembly	cell organization and biogenesis	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	phosphorylation	other metabolic processes	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c19053	chromatin-mediated maintenance of transcription	RNA metabolism	P	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor homolog) (Williams-Beuren syndrome chromosomal region 9 protein homolog)
ruditapes_c24472	lipid catabolic process	other metabolic processes	P	Phospholipase D1 (PLD 1) (mPLD1) (EC 3.1.4.4) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D1)
ruditapes_c24472	cell communication	other biological processes	P	Phospholipase D1 (PLD 1) (mPLD1) (EC 3.1.4.4) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D1)
ruditapes_c24472	metabolic process	other metabolic processes	P	Phospholipase D1 (PLD 1) (mPLD1) (EC 3.1.4.4) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D1)
ruditapes_c12329	inner ear receptor cell differentiation	developmental processes	P	Non-syndromic hearing impairment protein 5 homolog
ruditapes_c18331	"transcription, DNA-dependent"	RNA metabolism	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	social behavior	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	brain development	developmental processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	negative regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	post-embryonic development	developmental processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	ventricular system development	developmental processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	cerebellum development	developmental processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	response to stress	stress response	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	positive regulation of synaptogenesis	developmental processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	positive regulation of synaptogenesis	cell organization and biogenesis	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	positive regulation of synaptogenesis	cell-cell signaling	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	"mitochondrial electron transport, ubiquinol to cytochrome c"	other metabolic processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	inositol metabolic process	other metabolic processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	negative regulation of histone acetylation	protein metabolism	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	negative regulation of histone acetylation	cell organization and biogenesis	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	dendrite development	developmental processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	dendrite development	cell organization and biogenesis	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	negative regulation of histone methylation	cell organization and biogenesis	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	learning	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	neuron projection development	developmental processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	neuron projection development	cell organization and biogenesis	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	regulation of respiratory gaseous exchange by neurological process	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	histone methylation	protein metabolism	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	histone methylation	cell organization and biogenesis	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	adult locomotory behavior	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	neuromuscular process controlling posture	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	neuron maturation	developmental processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	negative regulation of histone methylation	protein metabolism	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	startle response	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	proprioception	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	neuron differentiation	developmental processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	synaptic transmission	cell-cell signaling	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	genetic imprinting	other metabolic processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	biogenic amine metabolic process	other metabolic processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	neurological system process involved in regulation of systemic arterial blood pressure	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	catecholamine secretion	transport	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	respiratory gaseous exchange	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	embryonic development	developmental processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	chromatin silencing	RNA metabolism	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	"regulation of gene expression, epigenetic"	other metabolic processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	glutamine metabolic process	other metabolic processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	neuromuscular process	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	behavioral fear response	stress response	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	sensory perception of pain	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	positive regulation of cell proliferation	cell cycle and proliferation	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	phosphatidylcholine metabolic process	other metabolic processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	long-term synaptic potentiation	cell-cell signaling	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	visual learning	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	memory	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	protein localization	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	negative regulation of neuron apoptosis	death	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	regulation of excitatory postsynaptic membrane potential	cell-cell signaling	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	long-term memory	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	synaptogenesis	developmental processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	synaptogenesis	cell organization and biogenesis	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	glucocorticoid metabolic process	other metabolic processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	response to hypoxia	stress response	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	histone acetylation	protein metabolism	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	histone acetylation	cell organization and biogenesis	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	pathogenesis	other biological processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	regulation of synaptic plasticity	cell-cell signaling	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c18331	cardiolipin metabolic process	other metabolic processes	P	Methyl-CpG-binding protein 2 (MeCp-2 protein) (MeCp2)
ruditapes_c9445	epithelial cell proliferation	cell cycle and proliferation	P	Leucine-rich repeat-containing G-protein coupled receptor 4 (G-protein coupled receptor 48)
ruditapes_c9445	tube morphogenesis	developmental processes	P	Leucine-rich repeat-containing G-protein coupled receptor 4 (G-protein coupled receptor 48)
ruditapes_c9445	"negative regulation of transcription, DNA-dependent"	RNA metabolism	P	Leucine-rich repeat-containing G-protein coupled receptor 4 (G-protein coupled receptor 48)
ruditapes_c9445	"positive regulation of transcription, DNA-dependent"	RNA metabolism	P	Leucine-rich repeat-containing G-protein coupled receptor 4 (G-protein coupled receptor 48)
ruditapes_c9445	male genitalia development	developmental processes	P	Leucine-rich repeat-containing G-protein coupled receptor 4 (G-protein coupled receptor 48)
ruditapes_c9445	G-protein coupled receptor protein signaling pathway	signal transduction	P	Leucine-rich repeat-containing G-protein coupled receptor 4 (G-protein coupled receptor 48)
ruditapes_c9445	signal transduction	signal transduction	P	Leucine-rich repeat-containing G-protein coupled receptor 4 (G-protein coupled receptor 48)
ruditapes_c7017	cortical actin cytoskeleton organization	cell organization and biogenesis	P	Band 4.1-like protein 1 (Neuronal protein 4.1) (4.1N)
ruditapes_c10529	tricarboxylic acid cycle	other metabolic processes	P	"Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (EC 6.2.1.5) (ATP-specific succinyl-CoA synthetase subunit beta) (Succinyl-CoA synthetase beta-A chain) (SCS-betaA)"
ruditapes_c10529	succinyl-CoA metabolic process	other metabolic processes	P	"Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (EC 6.2.1.5) (ATP-specific succinyl-CoA synthetase subunit beta) (Succinyl-CoA synthetase beta-A chain) (SCS-betaA)"
ruditapes_c10529	metabolic process	other metabolic processes	P	"Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (EC 6.2.1.5) (ATP-specific succinyl-CoA synthetase subunit beta) (Succinyl-CoA synthetase beta-A chain) (SCS-betaA)"
ruditapes_c18048	tricarboxylic acid cycle	other metabolic processes	P	"Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (EC 6.2.1.5) (ATP-specific succinyl-CoA synthetase subunit beta) (Succinyl-CoA synthetase beta-A chain) (SCS-betaA)"
ruditapes_c18048	succinyl-CoA metabolic process	other metabolic processes	P	"Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (EC 6.2.1.5) (ATP-specific succinyl-CoA synthetase subunit beta) (Succinyl-CoA synthetase beta-A chain) (SCS-betaA)"
ruditapes_c18048	metabolic process	other metabolic processes	P	"Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (EC 6.2.1.5) (ATP-specific succinyl-CoA synthetase subunit beta) (Succinyl-CoA synthetase beta-A chain) (SCS-betaA)"
ruditapes_c10529	succinate metabolic process	other metabolic processes	P	"Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (EC 6.2.1.5) (ATP-specific succinyl-CoA synthetase subunit beta) (Succinyl-CoA synthetase beta-A chain) (SCS-betaA)"
ruditapes_c18048	succinate metabolic process	other metabolic processes	P	"Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (EC 6.2.1.5) (ATP-specific succinyl-CoA synthetase subunit beta) (Succinyl-CoA synthetase beta-A chain) (SCS-betaA)"
ruditapes_lrc25428	protein amino acid phosphorylation	protein metabolism	P	Receptor-interacting serine/threonine-protein kinase 3 (EC 2.7.11.1) (Homocysteine respondent protein HCYP2) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3)
ruditapes_lrc25428	I-kappaB kinase/NF-kappaB cascade	signal transduction	P	Receptor-interacting serine/threonine-protein kinase 3 (EC 2.7.11.1) (Homocysteine respondent protein HCYP2) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3)
ruditapes_lrc25428	induction of apoptosis	death	P	Receptor-interacting serine/threonine-protein kinase 3 (EC 2.7.11.1) (Homocysteine respondent protein HCYP2) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3)
ruditapes_lrc25428	phosphorylation	other metabolic processes	P	Receptor-interacting serine/threonine-protein kinase 3 (EC 2.7.11.1) (Homocysteine respondent protein HCYP2) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3)
ruditapes_s36581	methylation	other metabolic processes	P	Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase) (Vitamin-B12 dependent methionine synthase) (MS)
ruditapes_s36581	methionine biosynthetic process	other metabolic processes	P	Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase) (Vitamin-B12 dependent methionine synthase) (MS)
ruditapes_s36581	pteridine and derivative metabolic process	other metabolic processes	P	Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase) (Vitamin-B12 dependent methionine synthase) (MS)
ruditapes_s36581	cellular metabolic process	other metabolic processes	P	Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase) (Vitamin-B12 dependent methionine synthase) (MS)
ruditapes_s36581	homocysteine metabolic process	other metabolic processes	P	Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase) (Vitamin-B12 dependent methionine synthase) (MS)
ruditapes_s36581	protein amino acid methylation	protein metabolism	P	Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase) (Vitamin-B12 dependent methionine synthase) (MS)
ruditapes_s36581	cellular amino acid biosynthetic process	other metabolic processes	P	Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase) (Vitamin-B12 dependent methionine synthase) (MS)
ruditapes_s36581	tetrahydrofolate metabolic process	other metabolic processes	P	Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase) (Vitamin-B12 dependent methionine synthase) (MS)
ruditapes2_c2161	ubiquitin-dependent protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-5 (EC 3.4.25.1) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) (Proteasome zeta chain)
ruditapes2_c2161	proteolysis	protein metabolism	P	Proteasome subunit alpha type-5 (EC 3.4.25.1) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) (Proteasome zeta chain)
ruditapes2_c2161	proteolysis involved in cellular protein catabolic process	protein metabolism	P	Proteasome subunit alpha type-5 (EC 3.4.25.1) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) (Proteasome zeta chain)
ruditapes2_c4752	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 292 (Zinc finger protein 15) (Zfp-15)
ruditapes2_c4752	"transcription, DNA-dependent"	RNA metabolism	P	Zinc finger protein 292 (Zinc finger protein 15) (Zfp-15)
ruditapes2_c4752	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	Zinc finger protein 292 (Zinc finger protein 15) (Zfp-15)
ruditapes2_c426	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes2_c426	establishment or maintenance of cell polarity	cell organization and biogenesis	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes2_c1035	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes2_c1035	positive regulation of axonogenesis	developmental processes	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes2_c1035	positive regulation of axonogenesis	cell organization and biogenesis	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes2_c426	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes2_c426	Golgi localization	other biological processes	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes2_c1035	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes2_c1035	Golgi localization	other biological processes	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes2_c426	positive regulation of axonogenesis	developmental processes	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes2_c426	positive regulation of axonogenesis	cell organization and biogenesis	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes2_c1035	establishment or maintenance of cell polarity	cell organization and biogenesis	P	Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Ste20-like kinase) (Sterile 20/oxidant stress-response kinase 1) (SOK-1) (Ste20/oxidant stress response kinase 1)
ruditapes_c15870	transport	transport	P	Mitochondrial carnitine/acylcarnitine carrier protein (Carnitine/acylcarnitine translocase) (CAC) (mCAC) (Solute carrier family 25 member 20)
ruditapes_lrc31463	phosphorylation	other metabolic processes	P	Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1)
ruditapes_lrc31463	peptidyl-serine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1)
ruditapes_lrc31463	protein amino acid phosphorylation	protein metabolism	P	Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1)
ruditapes_lrc31463	peptidyl-threonine phosphorylation	protein metabolism	P	Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1)
ruditapes_lrc31463	brain development	developmental processes	P	Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1)
ruditapes2_c1749	intracellular protein transport	transport	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	intracellular transport of viral proteins in host cell	transport	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	mitosis	cell cycle and proliferation	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	mitosis	cell organization and biogenesis	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	regulation of Rac GTPase activity	signal transduction	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	regulation of cytoskeleton organization	cell organization and biogenesis	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	establishment of mitotic spindle orientation	cell cycle and proliferation	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	establishment of mitotic spindle orientation	cell organization and biogenesis	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	neuron projection morphogenesis	developmental processes	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	neuron projection morphogenesis	cell organization and biogenesis	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	nervous system development	developmental processes	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	negative regulation of neurogenesis	developmental processes	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	transport	transport	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	cell division	other biological processes	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	regulation of G-protein coupled receptor protein signaling pathway	signal transduction	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes2_c1749	cell cycle	cell cycle and proliferation	P	Dynein light chain Tctex-type 1 (Activator of G-protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)
ruditapes_c10921	carbohydrate metabolic process	other metabolic processes	P	Probable alpha-glucosidase (EC 3.2.1.20)
ruditapes_c10921	metabolic process	other metabolic processes	P	Probable alpha-glucosidase (EC 3.2.1.20)
ruditapes_c16919	RNA modification	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c16919	pseudouridine synthesis	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c16919	tRNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c16919	RNA processing	RNA metabolism	P	tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)
ruditapes_c7473	carbohydrate transport	transport	P	Gluconate permease
ruditapes_c7473	D-gluconate metabolic process	other metabolic processes	P	Gluconate permease
ruditapes_c7473	transport	transport	P	Gluconate permease
ruditapes_c28466	rRNA modification	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c28466	methylation	other metabolic processes	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c28466	rRNA methylation	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c28466	rRNA processing	RNA metabolism	P	"Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase)"
ruditapes_c31976	DNA recombination	DNA metabolism	P	DNA recombination protein RmuC homolog
ruditapes_c19474	cell division	other biological processes	P	DNA translocase FtsK
ruditapes_c19474	cell cycle	cell cycle and proliferation	P	DNA translocase FtsK
ruditapes_c22758	cell division	other biological processes	P	DNA translocase FtsK
ruditapes_c19474	chromosome segregation	other biological processes	P	DNA translocase FtsK
ruditapes_c22758	cell cycle	cell cycle and proliferation	P	DNA translocase FtsK
ruditapes_c22758	chromosome segregation	other biological processes	P	DNA translocase FtsK
ruditapes_c30515	riboflavin biosynthetic process	other metabolic processes	P	Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)]
ruditapes_c30515	oxidation reduction	other metabolic processes	P	Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)]
ruditapes_c30515	metabolic process	other metabolic processes	P	Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)]
ruditapes_c29367	ion transport	transport	P	Outer membrane protein B
ruditapes_c29367	transport	transport	P	Outer membrane protein B
ruditapes_c9650	DNA repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c9650	DNA repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes_c9650	response to DNA damage stimulus	stress response	P	DNA mismatch repair protein MutL
ruditapes_c9650	mismatch repair	stress response	P	DNA mismatch repair protein MutL
ruditapes_c9650	mismatch repair	DNA metabolism	P	DNA mismatch repair protein MutL
ruditapes2_lrc3832	protein refolding	protein metabolism	P	60 kDa chaperonin 2 (GroEL protein 2) (Protein Cpn60 2)
ruditapes2_lrc3832	cellular protein metabolic process	protein metabolism	P	60 kDa chaperonin 2 (GroEL protein 2) (Protein Cpn60 2)
ruditapes_c16559	nucleotide metabolic process	other metabolic processes	P	Non-canonical purine NTP pyrophosphatase (EC 3.6.1.19) (Non-standard purine NTP pyrophosphatase) (Nucleoside-triphosphate diphosphatase) (Nucleoside-triphosphate pyrophosphatase) (NTPase)
ruditapes_c28273	metabolic process	other metabolic processes	P	"Folate synthesis bifunctional protein [Includes: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c28273	cellular metabolic process	other metabolic processes	P	"Folate synthesis bifunctional protein [Includes: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c28273	folic acid biosynthetic process	other metabolic processes	P	"Folate synthesis bifunctional protein [Includes: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c28273	phosphorylation	other metabolic processes	P	"Folate synthesis bifunctional protein [Includes: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c28273	folic acid and derivative biosynthetic process	other metabolic processes	P	"Folate synthesis bifunctional protein [Includes: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c28273	pteridine and derivative metabolic process	other metabolic processes	P	"Folate synthesis bifunctional protein [Includes: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK); Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase)]"
ruditapes_c16138	transport	transport	P	Putative phosphate permease CPn
ruditapes_c16138	phosphate transport	transport	P	Putative phosphate permease CPn
ruditapes_c10192	lysine biosynthetic process via diaminopimelate	other metabolic processes	P	Diaminopimelate epimerase (DAP epimerase) (EC 5.1.1.7)
ruditapes_c10192	lysine biosynthetic process	other metabolic processes	P	Diaminopimelate epimerase (DAP epimerase) (EC 5.1.1.7)
ruditapes_c10192	cellular amino acid biosynthetic process	other metabolic processes	P	Diaminopimelate epimerase (DAP epimerase) (EC 5.1.1.7)
ruditapes_c10152	rRNA processing	RNA metabolism	P	Ribosome-binding factor A
ruditapes_c3543	DNA replication initiation	DNA metabolism	P	Chromosomal replication initiator protein DnaA 1
ruditapes_c3543	regulation of DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA 1
ruditapes_c3543	DNA replication	DNA metabolism	P	Chromosomal replication initiator protein DnaA 1
ruditapes2_c3271	DNA topological change	DNA metabolism	P	DNA gyrase subunit A (EC 5.99.1.3)
ruditapes2_c3271	DNA metabolic process	DNA metabolism	P	DNA gyrase subunit A (EC 5.99.1.3)
ruditapes_c25613	regulation of RNA elongation	RNA metabolism	P	Transcription termination/antitermination protein NusG
ruditapes_c25613	transcription antitermination	protein metabolism	P	Transcription termination/antitermination protein NusG
ruditapes_c25613	transcription antitermination	RNA metabolism	P	Transcription termination/antitermination protein NusG
ruditapes_c25613	transcription antitermination	cell organization and biogenesis	P	Transcription termination/antitermination protein NusG
ruditapes_c25613	"regulation of transcription, DNA-dependent"	RNA metabolism	P	Transcription termination/antitermination protein NusG
ruditapes_c25613	positive regulation of RNA elongation from RNA polymerase II promoter	RNA metabolism	P	Transcription termination/antitermination protein NusG
ruditapes_c25613	"transcription, DNA-dependent"	RNA metabolism	P	Transcription termination/antitermination protein NusG
ruditapes_c25613	transcription termination	RNA metabolism	P	Transcription termination/antitermination protein NusG
ruditapes_c25613	transcription termination	cell organization and biogenesis	P	Transcription termination/antitermination protein NusG
ruditapes_c17505	oxidation reduction	other metabolic processes	P	Probable xylitol oxidase (EC 1.1.3.41) (Alditol oxidase)
ruditapes_c24037	cell cycle	cell cycle and proliferation	P	DNA translocase FtsK
ruditapes_c24037	chromosome segregation	other biological processes	P	DNA translocase FtsK
ruditapes_c24037	cell division	other biological processes	P	DNA translocase FtsK
ruditapes_c15145	metabolic process	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase I (EC 2.1.1.198) (16S rRNA 2'-O-ribose C1402 methyltransferase) (rRNA (cytidine-2'-O-)-methyltransferase RsmI)
ruditapes_c15145	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase I (EC 2.1.1.198) (16S rRNA 2'-O-ribose C1402 methyltransferase) (rRNA (cytidine-2'-O-)-methyltransferase RsmI)
ruditapes_c15145	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase I (EC 2.1.1.198) (16S rRNA 2'-O-ribose C1402 methyltransferase) (rRNA (cytidine-2'-O-)-methyltransferase RsmI)
ruditapes_c26582	transport	transport	P	Putative transporter AmpG 2
ruditapes_c26582	transmembrane transport	transport	P	Putative transporter AmpG 2
ruditapes_c29946	glycolysis	other metabolic processes	P	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (E2)
ruditapes_c29946	pyruvate metabolic process	other metabolic processes	P	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (E2)
ruditapes_c29946	metabolic process	other metabolic processes	P	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (E2)
ruditapes_c7468	phosphorylation	other metabolic processes	P	"Pyruvate, phosphate dikinase (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase)"
ruditapes_c20534	tetrapyrrole biosynthetic process	other metabolic processes	P	Uncharacterized protein RP474
ruditapes_c7778	glutamine metabolic process	other metabolic processes	P	Putative glutamine amidotransferase-like protein RP404
ruditapes2_c2601	protein secretion by the type IV secretion system	transport	P	Uncharacterized protein RP104
ruditapes2_c1571	methylation	other metabolic processes	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes2_c1571	rRNA processing	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes2_c1571	rRNA methylation	RNA metabolism	P	Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
ruditapes_c1702	response to heat	stress response	P	Chaperone protein ClpB
ruditapes_c1702	protein metabolic process	protein metabolism	P	Chaperone protein ClpB
ruditapes_c1702	protein processing	protein metabolism	P	Chaperone protein ClpB
ruditapes_c1702	response to stress	stress response	P	Chaperone protein ClpB
ruditapes_c29282	oxidation reduction	other metabolic processes	P	Uncharacterized protein RP006
ruditapes_c24262	response to heat	stress response	P	Chaperone protein DnaJ
ruditapes_c24262	DNA replication	DNA metabolism	P	Chaperone protein DnaJ
ruditapes_c24262	response to stress	stress response	P	Chaperone protein DnaJ
ruditapes_c24262	protein folding	protein metabolism	P	Chaperone protein DnaJ
ruditapes_c21971	metabolic process	other metabolic processes	P	Histidinol dehydrogenase (HDH) (EC 1.1.1.23)
ruditapes_c21971	oxidation reduction	other metabolic processes	P	Histidinol dehydrogenase (HDH) (EC 1.1.1.23)
ruditapes_c21971	histidine biosynthetic process	other metabolic processes	P	Histidinol dehydrogenase (HDH) (EC 1.1.1.23)
ruditapes_c21971	cellular amino acid biosynthetic process	other metabolic processes	P	Histidinol dehydrogenase (HDH) (EC 1.1.1.23)
ruditapes_c24469	DNA replication	DNA metabolism	P	DNA polymerase III subunit alpha (EC 2.7.7.7)
ruditapes_c4156	pyridoxine biosynthetic process	other metabolic processes	P	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase)
ruditapes_c4156	oxidation reduction	other metabolic processes	P	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase)
ruditapes2_c1928	purine base biosynthetic process	other metabolic processes	P	Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)
ruditapes2_c1928	purine nucleotide biosynthetic process	other metabolic processes	P	Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)
ruditapes_c21864	oxidation reduction	other metabolic processes	P	Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2)
ruditapes_c21864	proline biosynthetic process	other metabolic processes	P	Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2)
ruditapes_c21864	cellular amino acid biosynthetic process	other metabolic processes	P	Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2)
ruditapes_c4264	transmembrane transport	transport	P	Uncharacterized MscS family protein jhp
ruditapes_lrc37479	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc4246	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_lrc37479	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc4246	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc3268	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc3268	tRNA processing	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc3268	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes2_lrc4246	tRNA modification	RNA metabolism	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_lrc37479	methylation	other metabolic processes	P	tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase)
ruditapes_lrc32502	carbon utilization	other metabolic processes	P	Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)
ruditapes_c8544	lysyl-tRNA aminoacylation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c8544	lysyl-tRNA aminoacylation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c8544	tRNA aminoacylation for protein translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c8544	tRNA aminoacylation for protein translation	RNA metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c8544	translation	protein metabolism	P	Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)
ruditapes_c21052	transport	transport	P	Magnesium transporter MRS2-5 (Magnesium Transporter 3) (AtMGT3)
ruditapes_c21052	ion transport	transport	P	Magnesium transporter MRS2-5 (Magnesium Transporter 3) (AtMGT3)
ruditapes_c21052	magnesium ion transport	transport	P	Magnesium transporter MRS2-5 (Magnesium Transporter 3) (AtMGT3)
ruditapes_c28534	transport	transport	P	Ureide permease 3 (AtUPS3)
ruditapes2_c1197	biological_process	other biological processes	P	Calmodulin-like protein 1
ruditapes2_c866	biological_process	other biological processes	P	Calmodulin-like protein 1
ruditapes_c26186	response to nematode	other biological processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	stamen development	developmental processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	transmembrane transport	transport	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	photomorphogenesis	developmental processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	response to auxin stimulus	other biological processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	anthocyanin accumulation in tissues in response to UV light	other biological processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	ATP catabolic process	other metabolic processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	response to red or far red light	other biological processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	regulation of cell size	other biological processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	transport	transport	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	response to blue light	other biological processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	auxin efflux	signal transduction	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	auxin efflux	transport	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	auxin mediated signaling pathway	signal transduction	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	positive gravitropism	other biological processes	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c26186	auxin polar transport	transport	P	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
ruditapes_c19483	response to toxin	other biological processes	P	Glutathione S-transferase T1 (AtGSTT1) (EC 2.5.1.18) (GST class-theta member 1) (Glutathione S-transferase 10)
ruditapes_c19483	oxidation reduction	other metabolic processes	P	Glutathione S-transferase T1 (AtGSTT1) (EC 2.5.1.18) (GST class-theta member 1) (Glutathione S-transferase 10)
ruditapes_c17047	response to toxin	other biological processes	P	Glutathione S-transferase T1 (AtGSTT1) (EC 2.5.1.18) (GST class-theta member 1) (Glutathione S-transferase 10)
ruditapes_c17047	toxin catabolic process	other metabolic processes	P	Glutathione S-transferase T1 (AtGSTT1) (EC 2.5.1.18) (GST class-theta member 1) (Glutathione S-transferase 10)
ruditapes_c19483	toxin catabolic process	other metabolic processes	P	Glutathione S-transferase T1 (AtGSTT1) (EC 2.5.1.18) (GST class-theta member 1) (Glutathione S-transferase 10)
ruditapes_c17047	oxidation reduction	other metabolic processes	P	Glutathione S-transferase T1 (AtGSTT1) (EC 2.5.1.18) (GST class-theta member 1) (Glutathione S-transferase 10)
ruditapes_c27959	protein amino acid phosphorylation	protein metabolism	P	Calcium-dependent protein kinase 22 (EC 2.7.11.1)
ruditapes_c27959	phosphorylation	other metabolic processes	P	Calcium-dependent protein kinase 22 (EC 2.7.11.1)
ruditapes_c27788	gibberellin biosynthetic process	other metabolic processes	P	Gibberellin 3-beta-dioxygenase 2 (EC 1.14.11.15) (GA 3-oxidase 2) (AtGA3ox2) (Gibberellin 3 beta-hydroxylase 2)
ruditapes_c27788	oxidation reduction	other metabolic processes	P	Gibberellin 3-beta-dioxygenase 2 (EC 1.14.11.15) (GA 3-oxidase 2) (AtGA3ox2) (Gibberellin 3 beta-hydroxylase 2)
ruditapes_c27788	response to red or far red light	other biological processes	P	Gibberellin 3-beta-dioxygenase 2 (EC 1.14.11.15) (GA 3-oxidase 2) (AtGA3ox2) (Gibberellin 3 beta-hydroxylase 2)
ruditapes_c27788	response to red light	other biological processes	P	Gibberellin 3-beta-dioxygenase 2 (EC 1.14.11.15) (GA 3-oxidase 2) (AtGA3ox2) (Gibberellin 3 beta-hydroxylase 2)
ruditapes_c4549	oxidation reduction	other metabolic processes	P	Sulfhydryl oxidase 2 (EC 1.8.3.2) (Quiescin-sulfhydryl oxidase 2) (AtQSOX2)
ruditapes_c4549	cell redox homeostasis	other biological processes	P	Sulfhydryl oxidase 2 (EC 1.8.3.2) (Quiescin-sulfhydryl oxidase 2) (AtQSOX2)
ruditapes_c29613	diterpene phytoalexin metabolic process	other metabolic processes	P	"Geranylgeranyl pyrophosphate synthase 7, chloroplastic (GGPP synthase 7) (GGPS7) (EC 2.5.1.-) ((2E,6E)-farnesyl diphosphate synthase 7) (Dimethylallyltranstransferase 7) (EC 2.5.1.1) (Farnesyl diphosphate synthase 7) (Farnesyltranstransferase 7) (EC 2.5.1.29) (Geranyltranstransferase 7) (EC 2.5.1.10)"
ruditapes_c29613	carotenoid biosynthetic process	other metabolic processes	P	"Geranylgeranyl pyrophosphate synthase 7, chloroplastic (GGPP synthase 7) (GGPS7) (EC 2.5.1.-) ((2E,6E)-farnesyl diphosphate synthase 7) (Dimethylallyltranstransferase 7) (EC 2.5.1.1) (Farnesyl diphosphate synthase 7) (Farnesyltranstransferase 7) (EC 2.5.1.29) (Geranyltranstransferase 7) (EC 2.5.1.10)"
ruditapes_c29613	isoprenoid biosynthetic process	other metabolic processes	P	"Geranylgeranyl pyrophosphate synthase 7, chloroplastic (GGPP synthase 7) (GGPS7) (EC 2.5.1.-) ((2E,6E)-farnesyl diphosphate synthase 7) (Dimethylallyltranstransferase 7) (EC 2.5.1.1) (Farnesyl diphosphate synthase 7) (Farnesyltranstransferase 7) (EC 2.5.1.29) (Geranyltranstransferase 7) (EC 2.5.1.10)"
ruditapes_lrc32469	lipid catabolic process	other metabolic processes	P	GDSL esterase/lipase At1g23500 (EC 3.1.1.-) (Extracellular lipase At1g23500)
ruditapes_lrc32469	lipid metabolic process	other metabolic processes	P	GDSL esterase/lipase At1g23500 (EC 3.1.1.-) (Extracellular lipase At1g23500)
ruditapes_c23066	methylation	other metabolic processes	P	Histone-lysine N-methyltransferase ASHR2 (EC 2.1.1.43) (ASH1-related protein 2) (Protein SET DOMAIN GROUP 39)
ruditapes_c23066	histone lysine methylation	protein metabolism	P	Histone-lysine N-methyltransferase ASHR2 (EC 2.1.1.43) (ASH1-related protein 2) (Protein SET DOMAIN GROUP 39)
ruditapes_c23066	histone lysine methylation	cell organization and biogenesis	P	Histone-lysine N-methyltransferase ASHR2 (EC 2.1.1.43) (ASH1-related protein 2) (Protein SET DOMAIN GROUP 39)
ruditapes_c23066	chromatin modification	cell organization and biogenesis	P	Histone-lysine N-methyltransferase ASHR2 (EC 2.1.1.43) (ASH1-related protein 2) (Protein SET DOMAIN GROUP 39)
ruditapes_c21061	phosphorylation	other metabolic processes	P	CDPK-related kinase 3 (AtCRK3) (EC 2.7.11.1) (Calcium/calmodulin-dependent protein kinase 4) (AtCK)
ruditapes_c21061	protein amino acid phosphorylation	protein metabolism	P	CDPK-related kinase 3 (AtCRK3) (EC 2.7.11.1) (Calcium/calmodulin-dependent protein kinase 4) (AtCK)
ruditapes_c18193	"regulation of transcription, DNA-dependent"	RNA metabolism	P	BES1/BZR1 homolog protein 4
ruditapes_c18193	biological_process	other biological processes	P	BES1/BZR1 homolog protein 4
ruditapes_c30167	response to wounding	stress response	P	Phytosulfokine receptor 1 (AtPSKR1) (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase 1)
ruditapes_c30167	protein amino acid phosphorylation	protein metabolism	P	Phytosulfokine receptor 1 (AtPSKR1) (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase 1)
ruditapes_c30167	phosphorylation	other metabolic processes	P	Phytosulfokine receptor 1 (AtPSKR1) (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase 1)
ruditapes_c30167	cGMP biosynthetic process	other metabolic processes	P	Phytosulfokine receptor 1 (AtPSKR1) (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase 1)
ruditapes_c9646	response to toxin	other biological processes	P	Glutathione S-transferase U2 (AtGSTU2) (EC 2.5.1.18) (GST class-tau member 2) (Glutathione S-transferase 20)
ruditapes_c9646	toxin catabolic process	other metabolic processes	P	Glutathione S-transferase U2 (AtGSTU2) (EC 2.5.1.18) (GST class-tau member 2) (Glutathione S-transferase 20)
ruditapes_c11325	oxidation reduction	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c11325	electron transport chain	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c11325	ATP synthesis coupled electron transport	other metabolic processes	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c11325	transport	transport	P	NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH dehydrogenase subunit 5)
ruditapes_c16145	mRNA processing	RNA metabolism	P	Cytochrome b mRNA maturase bI3
ruditapes_c16145	respiratory electron transport chain	other metabolic processes	P	Cytochrome b mRNA maturase bI3
ruditapes_c16145	RNA splicing	RNA metabolism	P	Cytochrome b mRNA maturase bI3
ruditapes_c16145	intron homing	DNA metabolism	P	Cytochrome b mRNA maturase bI3
ruditapes_c16145	Group I intron splicing	RNA metabolism	P	Cytochrome b mRNA maturase bI3
ruditapes_c30510	methylation	other metabolic processes	P	
ruditapes_c30510	vitamin E biosynthetic process	other metabolic processes	P	
ruditapes_c30510	metabolic process	other metabolic processes	P	
ruditapes_c30510	plastoquinone biosynthetic process	other metabolic processes	P	
ruditapes_c19074	positive regulation of sister chromatid cohesion	cell cycle and proliferation	P	
ruditapes_c19074	positive regulation of sister chromatid cohesion	cell organization and biogenesis	P	
ruditapes_c16563	proteolysis	protein metabolism	P	
ruditapes_c12532	unidimensional cell growth	other biological processes	P	
ruditapes_c19074	embryonic development ending in seed dormancy	developmental processes	P	
ruditapes_c16563	embryonic development ending in seed dormancy	developmental processes	P	
ruditapes_c16563	positive regulation of sister chromatid cohesion	cell cycle and proliferation	P	
ruditapes_c16563	positive regulation of sister chromatid cohesion	cell organization and biogenesis	P	
ruditapes_c12532	positive regulation of sister chromatid cohesion	cell organization and biogenesis	P	
ruditapes_c16563	meiotic chromosome separation	cell cycle and proliferation	P	
ruditapes_c19074	unidimensional cell growth	other biological processes	P	
ruditapes_c12532	meiotic chromosome separation	cell cycle and proliferation	P	
ruditapes_c12532	chromosome separation	cell cycle and proliferation	P	
ruditapes_c16563	unidimensional cell growth	other biological processes	P	
ruditapes_c19074	meiotic chromosome separation	cell cycle and proliferation	P	
ruditapes_c19074	endosperm development	developmental processes	P	
ruditapes_c12532	embryonic development ending in seed dormancy	developmental processes	P	
ruditapes_c12532	positive regulation of sister chromatid cohesion	cell cycle and proliferation	P	
ruditapes_c12532	proteolysis	protein metabolism	P	
ruditapes_c19074	chromosome separation	cell cycle and proliferation	P	
ruditapes_c16563	endosperm development	developmental processes	P	
ruditapes_c16563	chromosome separation	cell cycle and proliferation	P	
ruditapes_c19074	proteolysis	protein metabolism	P	
ruditapes_c12532	endosperm development	developmental processes	P	
ruditapes_c7722	cytolysis	death	P	
ruditapes_c17933	cell fate specification	other biological processes	P	
ruditapes_c17933	proteolysis	protein metabolism	P	
ruditapes_c17394	pathogenesis	other biological processes	P	
ruditapes_c10239	pathogenesis	other biological processes	P	
ruditapes_c35674	biofilm formation	other biological processes	P	
ruditapes_c10239	filamentous growth	other biological processes	P	
ruditapes_c10239	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	
ruditapes_c17394	filamentous growth	other biological processes	P	
ruditapes_c35674	fungal-type cell wall organization	cell organization and biogenesis	P	
ruditapes_c17394	biofilm formation	other biological processes	P	
ruditapes_c35674	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	
ruditapes_c10239	fungal-type cell wall organization	cell organization and biogenesis	P	
ruditapes_c35674	pathogenesis	other biological processes	P	
ruditapes_c35674	filamentous growth	other biological processes	P	
ruditapes_c17394	fungal-type cell wall organization	cell organization and biogenesis	P	
ruditapes_c17394	positive regulation of transcription from RNA polymerase II promoter	RNA metabolism	P	
ruditapes_c10239	biofilm formation	other biological processes	P	
ruditapes_c31929	metabolic process	other metabolic processes	P	
ruditapes_c21597	oxidation reduction	other metabolic processes	P	
ruditapes_c21597	cellular aromatic compound metabolic process	other metabolic processes	P	
ruditapes_c31812	G-protein coupled receptor protein signaling pathway	signal transduction	P	
ruditapes_c27165	thigmotropism	other biological processes	P	
ruditapes_c27165	gravitropism	other biological processes	P	
ruditapes_c27165	G-protein coupled receptor protein signaling pathway	signal transduction	P	
ruditapes_c27165	response to glucose stimulus	other biological processes	P	
ruditapes_c27165	signal transduction	signal transduction	P	
ruditapes_c27165	response to sucrose stimulus	other biological processes	P	
ruditapes_c27165	response to ethylene stimulus	other biological processes	P	
ruditapes_c27165	root development	developmental processes	P	
ruditapes_c27165	response to mannitol stimulus	other biological processes	P	
ruditapes_c27165	response to abscisic acid stimulus	other biological processes	P	
ruditapes_c27165	response to fructose stimulus	other biological processes	P	
ruditapes_c20309	ubiquitin-dependent protein catabolic process	protein metabolism	P	
ruditapes_c20309	proteolysis involved in cellular protein catabolic process	protein metabolism	P	
ruditapes_lrc32462	phosphorylation	other metabolic processes	P	
ruditapes2_c3506	negative regulation of peptidase activity	other biological processes	P	
ruditapes_lrc35406	negative regulation of peptidase activity	other biological processes	P	
ruditapes2_c3872	negative regulation of peptidase activity	other biological processes	P	
ruditapes_lrc34501	negative regulation of peptidase activity	other biological processes	P	
ruditapes_lrc35566	negative regulation of peptidase activity	other biological processes	P	
ruditapes_lrc32748	negative regulation of peptidase activity	other biological processes	P	
ruditapes2_lrc4648	negative regulation of peptidase activity	other biological processes	P	
ruditapes2_lrc3958	negative regulation of peptidase activity	other biological processes	P	
ruditapes_lrc36882	negative regulation of peptidase activity	other biological processes	P	
ruditapes_c21673	leukotriene metabolic process	other metabolic processes	P	
ruditapes_c21673	oxidation reduction	other metabolic processes	P	
ruditapes_lrc34046	malate metabolic process	other metabolic processes	P	
ruditapes_lrc34046	oxidation reduction	other metabolic processes	P	
ruditapes_lrc34046	cellular carbohydrate metabolic process	other metabolic processes	P	
ruditapes_lrc34046	tricarboxylic acid cycle	other metabolic processes	P	
ruditapes_lrc34046	carbohydrate metabolic process	other metabolic processes	P	
ruditapes_c9957	response to UV-B	other biological processes	P	
ruditapes_c9957	DNA replication	DNA metabolism	P	
ruditapes2_c3573	G-protein coupled receptor protein signaling pathway	signal transduction	P	
ruditapes2_c5623	G-protein coupled receptor protein signaling pathway	signal transduction	P	
ruditapes_c911	G-protein coupled receptor protein signaling pathway	signal transduction	P	
ruditapes2_lrc5710	negative regulation of peptidase activity	other biological processes	P	
ruditapes_lrc35156	negative regulation of peptidase activity	other biological processes	P	
ruditapes_c23315	metabolic process	other metabolic processes	P	
ruditapes_c10264	nematode larval development	developmental processes	P	
ruditapes_c10264	embryonic development ending in birth or egg hatching	developmental processes	P	
ruditapes_c10264	growth	other biological processes	P	
ruditapes_c7001	biological_process	other biological processes	P